Query 001275
Match_columns 1109
No_of_seqs 1146 out of 7571
Neff 9.1
Searched_HMMs 46136
Date Thu Mar 28 20:30:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001275.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001275hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 6E-115 1E-119 1130.9 61.9 915 26-1102 27-953 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.7E-62 3.7E-67 638.8 28.1 514 191-732 69-585 (968)
3 KOG1187 Serine/threonine prote 100.0 1.7E-49 3.8E-54 447.5 27.1 290 805-1101 61-353 (361)
4 KOG0472 Leucine-rich repeat pr 100.0 1.5E-48 3.2E-53 408.8 -7.5 488 119-684 45-541 (565)
5 KOG0581 Mitogen-activated prot 100.0 6.1E-44 1.3E-48 376.3 18.5 256 820-1098 80-337 (364)
6 KOG0192 Tyrosine kinase specif 100.0 5.8E-43 1.3E-47 390.9 21.1 254 822-1100 44-303 (362)
7 KOG0615 Serine/threonine prote 100.0 5.5E-43 1.2E-47 370.1 15.2 257 819-1100 172-441 (475)
8 KOG0472 Leucine-rich repeat pr 100.0 3.6E-46 7.7E-51 391.0 -9.2 492 89-611 39-541 (565)
9 KOG0197 Tyrosine kinases [Sign 100.0 1.3E-42 2.8E-47 384.0 16.3 258 821-1105 208-466 (468)
10 KOG1026 Nerve growth factor re 100.0 1.1E-42 2.3E-47 402.6 14.4 261 819-1102 486-764 (774)
11 KOG0595 Serine/threonine-prote 100.0 6.1E-42 1.3E-46 363.5 17.7 200 819-1027 10-217 (429)
12 KOG0575 Polo-like serine/threo 100.0 2.9E-41 6.3E-46 376.1 22.2 252 819-1099 18-272 (592)
13 KOG0591 NIMA (never in mitosis 100.0 7.4E-42 1.6E-46 343.5 5.5 260 819-1099 19-284 (375)
14 KOG0593 Predicted protein kina 100.0 1.1E-40 2.3E-45 338.7 12.9 269 819-1096 2-284 (396)
15 KOG0598 Ribosomal protein S6 k 100.0 7.1E-40 1.5E-44 345.7 17.5 250 818-1096 24-281 (357)
16 KOG0661 MAPK related serine/th 100.0 9.1E-41 2E-45 359.4 9.1 271 818-1098 9-293 (538)
17 KOG0196 Tyrosine kinase, EPH ( 100.0 6E-41 1.3E-45 378.3 7.0 256 822-1102 632-893 (996)
18 KOG0659 Cdk activating kinase 100.0 4.1E-39 8.8E-44 322.3 16.6 273 819-1100 2-285 (318)
19 KOG4194 Membrane glycoprotein 100.0 2.4E-40 5.3E-45 361.4 7.9 368 120-489 79-449 (873)
20 KOG0600 Cdc2-related protein k 100.0 6.6E-39 1.4E-43 347.7 17.1 271 819-1097 117-401 (560)
21 KOG0582 Ste20-like serine/thre 100.0 2.8E-38 6E-43 337.7 21.6 264 819-1098 26-295 (516)
22 KOG0198 MEKK and related serin 100.0 1.1E-38 2.3E-43 345.0 17.2 258 819-1100 17-280 (313)
23 KOG0592 3-phosphoinositide-dep 100.0 7.8E-39 1.7E-43 349.9 16.1 258 815-1099 69-341 (604)
24 KOG1094 Discoidin domain recep 100.0 7.3E-39 1.6E-43 350.2 14.7 265 819-1100 538-804 (807)
25 KOG0578 p21-activated serine/t 100.0 7.4E-39 1.6E-43 354.0 14.4 251 819-1097 273-524 (550)
26 KOG4194 Membrane glycoprotein 100.0 6.8E-40 1.5E-44 357.9 3.8 390 146-557 55-446 (873)
27 cd05102 PTKc_VEGFR3 Catalytic 100.0 4E-38 8.7E-43 360.7 18.5 262 818-1101 6-335 (338)
28 KOG3653 Transforming growth fa 100.0 2.8E-38 6.1E-43 340.0 15.4 273 819-1102 210-505 (534)
29 KOG0193 Serine/threonine prote 100.0 2.1E-38 4.5E-43 350.6 13.7 267 812-1102 385-655 (678)
30 KOG1095 Protein tyrosine kinas 100.0 5.8E-38 1.3E-42 376.8 18.0 261 819-1101 692-962 (1025)
31 KOG0618 Serine/threonine phosp 100.0 8.2E-40 1.8E-44 376.6 0.4 487 95-632 21-510 (1081)
32 KOG0583 Serine/threonine prote 100.0 7E-37 1.5E-41 345.8 22.9 256 817-1100 15-279 (370)
33 KOG0588 Serine/threonine prote 100.0 2.6E-37 5.6E-42 344.4 18.8 250 820-1099 13-266 (786)
34 KOG0618 Serine/threonine phosp 100.0 9E-40 1.9E-44 376.3 -1.0 481 172-705 3-487 (1081)
35 cd05096 PTKc_DDR1 Catalytic do 100.0 8.3E-37 1.8E-41 344.3 23.1 265 819-1099 5-304 (304)
36 KOG2052 Activin A type IB rece 100.0 2.1E-37 4.5E-42 330.8 16.3 265 818-1101 210-504 (513)
37 KOG0597 Serine-threonine prote 100.0 1.4E-37 3E-42 339.0 13.8 249 819-1097 2-252 (808)
38 KOG0194 Protein tyrosine kinas 100.0 1.3E-37 2.9E-42 350.7 13.9 258 820-1104 158-424 (474)
39 KOG4721 Serine/threonine prote 100.0 6.6E-38 1.4E-42 340.8 10.9 242 823-1101 128-369 (904)
40 KOG0201 Serine/threonine prote 100.0 5.2E-38 1.1E-42 336.0 8.0 251 819-1097 13-264 (467)
41 KOG0611 Predicted serine/threo 100.0 3.1E-37 6.7E-42 323.1 13.0 250 819-1099 53-306 (668)
42 KOG1025 Epidermal growth facto 100.0 2.4E-37 5.2E-42 349.8 12.7 254 821-1100 698-957 (1177)
43 cd05104 PTKc_Kit Catalytic dom 100.0 1.5E-36 3.2E-41 351.3 19.5 260 819-1100 35-374 (375)
44 KOG0616 cAMP-dependent protein 100.0 1.5E-36 3.3E-41 308.4 16.9 198 819-1027 44-244 (355)
45 KOG0663 Protein kinase PITSLRE 100.0 1.1E-36 2.4E-41 313.7 15.9 274 819-1101 76-366 (419)
46 KOG0444 Cytoskeletal regulator 100.0 1.7E-38 3.7E-43 348.0 1.5 363 311-705 7-373 (1255)
47 cd05106 PTKc_CSF-1R Catalytic 100.0 2.3E-36 4.9E-41 349.4 18.1 260 819-1100 38-372 (374)
48 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-36 2.6E-41 326.9 14.1 258 817-1100 95-376 (576)
49 PHA02988 hypothetical protein; 100.0 6.9E-36 1.5E-40 332.4 20.7 246 824-1100 25-279 (283)
50 KOG0605 NDR and related serine 100.0 3.9E-36 8.4E-41 329.6 18.1 257 818-1098 140-447 (550)
51 KOG0660 Mitogen-activated prot 100.0 1.2E-36 2.7E-41 319.7 13.4 273 817-1097 20-311 (359)
52 cd05631 STKc_GRK4 Catalytic do 100.0 2E-35 4.4E-40 329.5 22.6 254 820-1097 1-262 (285)
53 cd07871 STKc_PCTAIRE3 Catalyti 100.0 8.9E-36 1.9E-40 333.0 19.7 269 819-1096 5-285 (288)
54 cd05048 PTKc_Ror Catalytic Dom 100.0 9.1E-36 2E-40 332.3 19.7 258 819-1099 5-282 (283)
55 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.1E-36 2E-40 345.4 20.2 261 818-1100 36-397 (400)
56 cd06649 PKc_MEK2 Catalytic dom 100.0 1.2E-35 2.6E-40 338.6 19.9 269 819-1099 5-304 (331)
57 KOG0658 Glycogen synthase kina 100.0 1.6E-36 3.5E-41 319.4 11.1 264 820-1096 25-306 (364)
58 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.3E-35 2.8E-40 327.7 18.8 256 819-1100 5-265 (266)
59 cd05612 STKc_PRKX_like Catalyt 100.0 1.2E-35 2.5E-40 332.4 18.7 249 819-1099 1-257 (291)
60 cd05108 PTKc_EGFR Catalytic do 100.0 1.1E-35 2.3E-40 337.0 18.6 258 819-1102 7-270 (316)
61 KOG0444 Cytoskeletal regulator 100.0 8.9E-38 1.9E-42 342.4 1.4 383 287-703 7-395 (1255)
62 KOG0594 Protein kinase PCTAIRE 100.0 1.8E-35 3.9E-40 313.0 18.5 275 819-1100 11-308 (323)
63 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.4E-35 7.4E-40 330.9 22.1 274 818-1100 4-292 (303)
64 cd05033 PTKc_EphR Catalytic do 100.0 2.6E-35 5.6E-40 325.4 20.7 257 819-1100 4-265 (266)
65 PF07714 Pkinase_Tyr: Protein 100.0 2.4E-36 5.2E-41 331.8 12.1 251 823-1097 3-259 (259)
66 KOG0580 Serine/threonine prote 100.0 5.2E-36 1.1E-40 296.0 13.1 251 819-1098 22-275 (281)
67 PTZ00263 protein kinase A cata 100.0 2.3E-35 4.9E-40 335.9 20.0 247 819-1097 18-272 (329)
68 cd05571 STKc_PKB Catalytic dom 100.0 2.7E-35 5.9E-40 334.5 20.6 244 825-1097 1-252 (323)
69 cd05062 PTKc_IGF-1R Catalytic 100.0 1.6E-35 3.5E-40 329.1 18.4 260 817-1099 4-277 (277)
70 cd05054 PTKc_VEGFR Catalytic d 100.0 1.5E-35 3.2E-40 338.0 17.9 260 819-1100 7-333 (337)
71 KOG2345 Serine/threonine prote 100.0 2.7E-36 5.8E-41 299.1 9.8 263 819-1100 21-300 (302)
72 cd05049 PTKc_Trk Catalytic dom 100.0 2.4E-35 5.3E-40 328.3 18.5 258 819-1099 5-280 (280)
73 cd07848 STKc_CDKL5 Catalytic d 100.0 5.1E-35 1.1E-39 327.0 21.0 268 820-1096 2-284 (287)
74 cd05111 PTK_HER3 Pseudokinase 100.0 3.8E-35 8.2E-40 326.3 19.7 264 819-1109 7-276 (279)
75 cd05114 PTKc_Tec_Rlk Catalytic 100.0 4.4E-35 9.6E-40 321.6 19.8 252 819-1098 4-256 (256)
76 cd06650 PKc_MEK1 Catalytic dom 100.0 3.6E-35 7.7E-40 334.7 19.3 199 819-1027 5-205 (333)
77 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.6E-35 7.8E-40 335.2 19.3 255 820-1098 2-259 (333)
78 PTZ00426 cAMP-dependent protei 100.0 5.2E-35 1.1E-39 333.5 19.9 248 819-1098 30-286 (340)
79 cd05072 PTKc_Lyn Catalytic dom 100.0 5.9E-35 1.3E-39 321.6 19.6 255 819-1100 6-261 (261)
80 cd05068 PTKc_Frk_like Catalyti 100.0 8.8E-35 1.9E-39 320.2 20.9 256 818-1100 5-261 (261)
81 cd05053 PTKc_FGFR Catalytic do 100.0 4.5E-35 9.7E-40 328.5 18.9 260 818-1100 11-291 (293)
82 KOG1989 ARK protein kinase fam 100.0 2.2E-35 4.8E-40 344.2 16.9 257 819-1101 37-312 (738)
83 cd05090 PTKc_Ror1 Catalytic do 100.0 6.3E-35 1.4E-39 325.5 19.5 258 819-1099 5-282 (283)
84 cd05585 STKc_YPK1_like Catalyt 100.0 9E-35 1.9E-39 328.6 20.9 241 827-1096 1-247 (312)
85 PHA03212 serine/threonine kina 100.0 1.1E-34 2.4E-39 336.3 22.0 266 819-1099 92-379 (391)
86 KOG0599 Phosphorylase kinase g 100.0 5.1E-36 1.1E-40 299.5 9.2 256 818-1099 16-286 (411)
87 cd07862 STKc_CDK6 Catalytic do 100.0 8.9E-35 1.9E-39 325.5 20.0 268 819-1096 1-287 (290)
88 PLN00034 mitogen-activated pro 100.0 7.3E-35 1.6E-39 335.3 19.6 252 819-1099 74-331 (353)
89 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-34 2.4E-39 329.4 20.7 244 825-1097 1-252 (323)
90 cd05097 PTKc_DDR_like Catalyti 100.0 1.6E-34 3.4E-39 324.3 21.7 265 819-1099 5-295 (295)
91 KOG0033 Ca2+/calmodulin-depend 100.0 6.3E-37 1.4E-41 301.8 1.8 257 818-1100 10-271 (355)
92 KOG0694 Serine/threonine prote 100.0 2.9E-35 6.3E-40 331.6 15.5 242 819-1090 368-613 (694)
93 cd05593 STKc_PKB_gamma Catalyt 100.0 1.6E-34 3.4E-39 328.6 21.8 245 825-1098 1-253 (328)
94 cd05094 PTKc_TrkC Catalytic do 100.0 8.8E-35 1.9E-39 325.6 19.4 261 819-1103 5-285 (291)
95 KOG4257 Focal adhesion tyrosin 100.0 1.5E-35 3.3E-40 325.7 12.6 255 819-1100 389-649 (974)
96 cd05084 PTKc_Fes Catalytic dom 100.0 1E-34 2.2E-39 317.9 19.2 249 825-1098 1-251 (252)
97 cd05093 PTKc_TrkB Catalytic do 100.0 8.1E-35 1.8E-39 325.4 18.6 259 819-1101 5-280 (288)
98 cd05109 PTKc_HER2 Catalytic do 100.0 1E-34 2.3E-39 323.0 19.4 263 819-1108 7-275 (279)
99 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.4E-35 1.8E-39 323.4 18.5 259 818-1099 5-277 (277)
100 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-34 2.7E-39 317.9 19.6 252 819-1098 4-256 (256)
101 cd05043 PTK_Ryk Pseudokinase d 100.0 9.3E-35 2E-39 323.6 18.8 262 818-1102 5-278 (280)
102 cd05584 STKc_p70S6K Catalytic 100.0 2.6E-34 5.7E-39 326.4 22.0 244 825-1097 2-257 (323)
103 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.3E-34 2.8E-39 335.5 19.7 260 819-1100 37-399 (401)
104 cd05045 PTKc_RET Catalytic dom 100.0 1.3E-34 2.7E-39 324.3 19.0 259 820-1101 1-287 (290)
105 cd05051 PTKc_DDR Catalytic dom 100.0 3.8E-34 8.3E-39 321.4 22.9 266 818-1099 4-296 (296)
106 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.2E-34 2.5E-39 332.3 19.0 270 820-1098 1-292 (338)
107 KOG0589 Serine/threonine prote 100.0 3.4E-35 7.3E-40 324.7 13.8 252 819-1096 4-258 (426)
108 cd05614 STKc_MSK2_N N-terminal 100.0 2.4E-34 5.2E-39 328.4 21.4 255 820-1098 1-269 (332)
109 cd05059 PTKc_Tec_like Catalyti 100.0 1.9E-34 4.2E-39 316.5 19.5 252 819-1098 4-256 (256)
110 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.2E-34 2.7E-39 319.1 18.0 257 817-1100 4-261 (261)
111 cd05061 PTKc_InsR Catalytic do 100.0 1.8E-34 3.9E-39 322.6 19.2 262 817-1101 4-279 (288)
112 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.7E-34 3.6E-39 325.6 19.0 261 818-1101 14-297 (304)
113 PTZ00267 NIMA-related protein 100.0 1.5E-34 3.2E-39 344.7 19.5 253 820-1096 68-323 (478)
114 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-34 2.3E-39 323.7 17.1 257 820-1099 6-282 (283)
115 cd08228 STKc_Nek6 Catalytic do 100.0 4.5E-34 9.8E-39 315.7 22.0 260 819-1100 2-265 (267)
116 KOG4278 Protein tyrosine kinas 100.0 4.4E-35 9.6E-40 320.9 13.5 256 818-1100 266-523 (1157)
117 cd05626 STKc_LATS2 Catalytic d 100.0 2.6E-34 5.6E-39 334.0 20.5 256 820-1098 2-307 (381)
118 PTZ00283 serine/threonine prot 100.0 1E-34 2.2E-39 345.9 17.3 258 816-1096 29-297 (496)
119 cd05095 PTKc_DDR2 Catalytic do 100.0 6.1E-34 1.3E-38 319.6 22.6 265 819-1099 5-296 (296)
120 cd05052 PTKc_Abl Catalytic dom 100.0 3.1E-34 6.7E-39 316.2 19.7 255 819-1100 6-262 (263)
121 cd05050 PTKc_Musk Catalytic do 100.0 2.1E-34 4.5E-39 322.2 18.6 259 818-1099 4-288 (288)
122 cd05594 STKc_PKB_alpha Catalyt 100.0 2.3E-34 5E-39 327.3 19.2 245 825-1098 1-254 (325)
123 cd05032 PTKc_InsR_like Catalyt 100.0 2.1E-34 4.5E-39 320.2 18.3 258 819-1099 6-277 (277)
124 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.7E-34 3.7E-39 332.5 18.1 256 819-1098 1-287 (350)
125 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.1E-34 4.5E-39 325.2 18.3 260 819-1101 18-300 (307)
126 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.4E-34 5.3E-39 320.7 18.7 268 821-1100 6-281 (283)
127 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.5E-34 5.4E-39 325.5 18.9 261 819-1102 12-295 (314)
128 cd05035 PTKc_Axl_like Catalyti 100.0 4.9E-34 1.1E-38 316.5 20.8 257 821-1100 1-272 (273)
129 cd05605 STKc_GRK4_like Catalyt 100.0 5.4E-34 1.2E-38 318.0 21.3 255 820-1098 1-263 (285)
130 cd05075 PTKc_Axl Catalytic dom 100.0 3.7E-34 8.1E-39 317.3 19.6 257 821-1100 1-271 (272)
131 cd05592 STKc_nPKC_theta_delta 100.0 5.4E-34 1.2E-38 322.6 21.2 243 825-1096 1-248 (316)
132 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.3E-34 4.9E-39 329.7 18.2 260 819-1100 7-339 (343)
133 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 6.9E-34 1.5E-38 314.6 21.4 255 825-1098 1-268 (269)
134 cd05092 PTKc_TrkA Catalytic do 100.0 3.1E-34 6.7E-39 319.3 18.5 257 819-1099 5-280 (280)
135 KOG0032 Ca2+/calmodulin-depend 100.0 4.7E-34 1E-38 322.2 20.0 256 818-1100 34-297 (382)
136 cd05588 STKc_aPKC Catalytic do 100.0 7.6E-34 1.6E-38 323.3 21.9 248 825-1096 1-262 (329)
137 cd05590 STKc_nPKC_eta Catalyti 100.0 5.2E-34 1.1E-38 323.3 20.4 244 825-1097 1-254 (320)
138 cd05618 STKc_aPKC_iota Catalyt 100.0 7.8E-34 1.7E-38 323.1 21.8 248 825-1096 1-262 (329)
139 cd05055 PTKc_PDGFR Catalytic d 100.0 4.2E-34 9.2E-39 321.5 19.4 259 819-1100 35-301 (302)
140 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.7E-34 1.2E-38 315.1 20.0 257 819-1100 5-267 (268)
141 cd05628 STKc_NDR1 Catalytic do 100.0 7.7E-34 1.7E-38 328.0 21.7 203 819-1027 1-239 (363)
142 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.2E-34 1.1E-38 322.3 19.8 272 819-1099 6-289 (309)
143 PHA03211 serine/threonine kina 100.0 6.3E-34 1.4E-38 333.3 21.2 267 818-1097 168-456 (461)
144 cd05589 STKc_PKN Catalytic dom 100.0 7.7E-34 1.7E-38 322.8 21.3 247 821-1097 1-258 (324)
145 cd05608 STKc_GRK1 Catalytic do 100.0 8.6E-34 1.9E-38 315.6 21.1 249 827-1097 1-258 (280)
146 cd05071 PTKc_Src Catalytic dom 100.0 8E-34 1.7E-38 312.6 20.5 254 819-1100 6-260 (262)
147 cd05587 STKc_cPKC Catalytic do 100.0 8.9E-34 1.9E-38 322.3 21.5 248 820-1096 1-257 (324)
148 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3.7E-34 7.9E-39 319.5 18.0 272 819-1100 4-283 (284)
149 PRK13184 pknD serine/threonine 100.0 4.2E-34 9E-39 347.2 19.8 261 819-1100 2-290 (932)
150 cd05089 PTKc_Tie1 Catalytic do 100.0 4.5E-34 9.7E-39 320.8 18.7 257 819-1101 2-276 (297)
151 cd05085 PTKc_Fer Catalytic dom 100.0 7.2E-34 1.6E-38 310.8 19.8 248 825-1098 1-249 (250)
152 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.5E-33 3.3E-38 311.5 22.5 260 819-1100 2-265 (267)
153 cd05599 STKc_NDR_like Catalyti 100.0 5.2E-34 1.1E-38 330.1 19.7 256 819-1098 1-298 (364)
154 cd05601 STKc_CRIK Catalytic do 100.0 3.3E-34 7.1E-39 327.0 17.7 255 819-1097 1-264 (330)
155 KOG0199 ACK and related non-re 100.0 8.2E-35 1.8E-39 323.9 12.3 255 821-1100 112-372 (1039)
156 cd05088 PTKc_Tie2 Catalytic do 100.0 4.4E-34 9.4E-39 321.7 18.2 256 819-1100 7-280 (303)
157 cd05629 STKc_NDR_like_fungal C 100.0 2.4E-34 5.2E-39 334.2 16.5 256 819-1098 1-307 (377)
158 cd06619 PKc_MKK5 Catalytic dom 100.0 1.1E-33 2.4E-38 314.7 21.2 253 819-1099 1-256 (279)
159 cd05591 STKc_nPKC_epsilon Cata 100.0 8.2E-34 1.8E-38 322.2 20.4 244 825-1097 1-255 (321)
160 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.1E-33 2.5E-38 311.2 21.0 253 819-1099 6-259 (260)
161 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.2E-33 2.6E-38 311.0 21.1 253 819-1099 6-259 (260)
162 cd05607 STKc_GRK7 Catalytic do 100.0 1.4E-33 3.1E-38 313.2 21.6 246 827-1095 1-249 (277)
163 cd05042 PTKc_Aatyk Catalytic d 100.0 5.1E-34 1.1E-38 315.7 17.9 255 825-1098 1-268 (269)
164 KOG0610 Putative serine/threon 100.0 3.5E-34 7.5E-39 304.3 15.7 256 819-1097 77-393 (459)
165 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.9E-34 1.3E-38 325.4 19.0 260 819-1101 12-294 (334)
166 cd05619 STKc_nPKC_theta Cataly 100.0 1.4E-33 3E-38 319.2 21.4 243 825-1096 1-248 (316)
167 cd06615 PKc_MEK Catalytic doma 100.0 8.6E-34 1.9E-38 320.1 19.7 267 820-1098 2-289 (308)
168 cd05582 STKc_RSK_N N-terminal 100.0 4.8E-34 1E-38 323.8 17.7 243 825-1096 2-254 (318)
169 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-33 2.6E-38 310.2 20.4 249 826-1100 2-255 (257)
170 cd05596 STKc_ROCK Catalytic do 100.0 1E-33 2.2E-38 327.0 20.7 256 818-1098 42-306 (370)
171 cd05621 STKc_ROCK2 Catalytic d 100.0 1E-33 2.2E-38 326.5 20.5 256 818-1098 42-306 (370)
172 cd06646 STKc_MAP4K5 Catalytic 100.0 1E-33 2.2E-38 312.9 19.7 254 819-1097 9-266 (267)
173 PTZ00036 glycogen synthase kin 100.0 6.8E-34 1.5E-38 335.0 19.3 264 818-1098 65-353 (440)
174 cd05620 STKc_nPKC_delta Cataly 100.0 1.3E-33 2.8E-38 319.5 20.9 243 825-1096 1-248 (316)
175 cd05066 PTKc_EphR_A Catalytic 100.0 9.8E-34 2.1E-38 313.0 19.4 257 819-1100 4-266 (267)
176 cd05065 PTKc_EphR_B Catalytic 100.0 8.3E-34 1.8E-38 314.0 18.8 256 820-1100 5-268 (269)
177 KOG4717 Serine/threonine prote 100.0 4E-34 8.7E-39 307.9 15.5 253 819-1100 18-274 (864)
178 KOG0667 Dual-specificity tyros 100.0 4.4E-34 9.4E-39 323.0 16.5 267 819-1098 186-504 (586)
179 cd08229 STKc_Nek7 Catalytic do 100.0 1.5E-33 3.4E-38 311.4 20.6 260 819-1100 2-265 (267)
180 cd06625 STKc_MEKK3_like Cataly 100.0 1.5E-33 3.2E-38 310.8 20.4 254 819-1097 2-261 (263)
181 cd05057 PTKc_EGFR_like Catalyt 100.0 9.5E-34 2.1E-38 315.3 19.0 263 819-1108 7-275 (279)
182 cd00192 PTKc Catalytic domain 100.0 1.6E-33 3.5E-38 310.0 20.6 251 825-1098 1-262 (262)
183 cd05570 STKc_PKC Catalytic dom 100.0 1.5E-33 3.2E-38 319.5 20.6 243 825-1096 1-252 (318)
184 cd05069 PTKc_Yes Catalytic dom 100.0 2.3E-33 4.9E-38 308.7 21.5 253 819-1099 6-259 (260)
185 cd05625 STKc_LATS1 Catalytic d 100.0 6.9E-34 1.5E-38 330.9 18.4 202 820-1027 2-251 (382)
186 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.9E-34 2.1E-38 316.0 18.6 259 819-1100 5-270 (284)
187 cd05598 STKc_LATS Catalytic do 100.0 2.7E-34 5.9E-39 333.7 14.6 255 820-1098 2-303 (376)
188 cd05040 PTKc_Ack_like Catalyti 100.0 1.4E-33 3E-38 309.9 19.1 251 825-1099 1-257 (257)
189 cd05616 STKc_cPKC_beta Catalyt 100.0 2E-33 4.3E-38 319.3 20.9 248 820-1096 1-257 (323)
190 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.1E-33 2.4E-38 315.7 18.5 268 819-1100 4-283 (284)
191 cd08529 STKc_FA2-like Catalyti 100.0 1.8E-33 4E-38 308.7 19.9 251 820-1096 1-253 (256)
192 cd07863 STKc_CDK4 Catalytic do 100.0 2E-33 4.3E-38 314.3 20.5 267 820-1096 1-285 (288)
193 cd05575 STKc_SGK Catalytic dom 100.0 1.7E-33 3.6E-38 320.0 20.1 243 825-1096 1-251 (323)
194 cd05034 PTKc_Src_like Catalyti 100.0 2.1E-33 4.6E-38 309.2 20.3 255 818-1099 5-260 (261)
195 cd05047 PTKc_Tie Catalytic dom 100.0 1.8E-33 3.8E-38 311.5 19.7 250 825-1100 1-268 (270)
196 cd05039 PTKc_Csk_like Catalyti 100.0 2.4E-33 5.3E-38 307.8 20.6 250 819-1100 6-256 (256)
197 cd05116 PTKc_Syk Catalytic dom 100.0 1.9E-33 4.2E-38 308.8 19.7 248 826-1100 2-255 (257)
198 cd07853 STKc_NLK Catalytic dom 100.0 1.1E-33 2.3E-38 328.1 18.6 267 820-1098 1-290 (372)
199 KOG4279 Serine/threonine prote 100.0 2.3E-34 5E-39 319.2 11.9 249 824-1096 580-832 (1226)
200 cd07876 STKc_JNK2 Catalytic do 100.0 1.9E-33 4.1E-38 324.5 20.0 269 817-1098 19-317 (359)
201 cd06654 STKc_PAK1 Catalytic do 100.0 1.9E-33 4.2E-38 315.3 19.5 251 819-1097 20-271 (296)
202 cd07861 STKc_CDK1_euk Catalyti 100.0 3.4E-33 7.3E-38 311.9 21.3 269 820-1096 1-282 (285)
203 cd05060 PTKc_Syk_like Catalyti 100.0 2.6E-33 5.7E-38 307.7 20.1 249 825-1100 1-255 (257)
204 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.3E-33 7.2E-38 317.8 21.5 249 825-1097 1-261 (327)
205 cd05044 PTKc_c-ros Catalytic d 100.0 1.6E-33 3.4E-38 311.7 18.4 252 825-1099 1-269 (269)
206 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 3.5E-33 7.5E-38 307.4 20.9 240 825-1098 1-262 (262)
207 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3E-33 6.6E-38 309.0 20.1 260 819-1096 1-264 (267)
208 cd05630 STKc_GRK6 Catalytic do 100.0 2.7E-33 5.9E-38 312.3 19.9 254 821-1098 2-263 (285)
209 PHA03207 serine/threonine kina 100.0 2.2E-33 4.8E-38 327.1 20.0 269 819-1100 92-379 (392)
210 cd05041 PTKc_Fes_like Catalyti 100.0 3.4E-33 7.4E-38 305.6 20.3 249 825-1098 1-250 (251)
211 cd08219 STKc_Nek3 Catalytic do 100.0 2.5E-33 5.3E-38 307.5 19.1 251 820-1096 1-252 (255)
212 cd05110 PTKc_HER4 Catalytic do 100.0 1.4E-33 3E-38 317.8 17.2 257 819-1101 7-269 (303)
213 PF00069 Pkinase: Protein kina 100.0 9.5E-34 2.1E-38 311.7 15.6 254 821-1096 1-257 (260)
214 cd05622 STKc_ROCK1 Catalytic d 100.0 3.2E-33 7E-38 322.8 20.6 261 813-1098 37-306 (371)
215 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.2E-33 4.7E-38 316.0 18.7 270 819-1098 6-288 (301)
216 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.1E-33 4.5E-38 313.4 18.4 272 819-1100 4-283 (284)
217 KOG0574 STE20-like serine/thre 100.0 1.6E-35 3.5E-40 299.2 1.1 250 821-1098 35-285 (502)
218 cd05082 PTKc_Csk Catalytic dom 100.0 4.6E-33 1E-37 305.5 20.6 249 819-1100 6-256 (256)
219 cd07868 STKc_CDK8 Catalytic do 100.0 4.5E-33 9.7E-38 316.0 21.0 197 824-1027 6-219 (317)
220 cd05602 STKc_SGK1 Catalytic do 100.0 3.1E-33 6.7E-38 318.0 19.7 239 825-1092 1-243 (325)
221 cd06640 STKc_MST4 Catalytic do 100.0 4.4E-33 9.6E-38 309.5 20.4 256 819-1103 4-260 (277)
222 cd05058 PTKc_Met_Ron Catalytic 100.0 8.3E-33 1.8E-37 304.7 22.3 252 825-1100 1-259 (262)
223 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.1E-33 1.5E-37 306.2 21.8 255 825-1098 1-267 (268)
224 cd05603 STKc_SGK2 Catalytic do 100.0 3.5E-33 7.7E-38 317.1 19.8 243 825-1096 1-251 (321)
225 cd06631 STKc_YSK4 Catalytic do 100.0 3E-33 6.5E-38 308.8 18.6 253 820-1096 1-262 (265)
226 cd06612 STKc_MST1_2 Catalytic 100.0 3.8E-33 8.1E-38 306.2 19.3 250 819-1096 3-253 (256)
227 cd05112 PTKc_Itk Catalytic dom 100.0 3.6E-33 7.8E-38 306.4 19.1 252 819-1098 4-256 (256)
228 cd05615 STKc_cPKC_alpha Cataly 100.0 5.1E-33 1.1E-37 315.7 20.8 248 820-1096 1-257 (323)
229 cd05073 PTKc_Hck Catalytic dom 100.0 5.7E-33 1.2E-37 305.6 20.5 253 819-1099 6-259 (260)
230 PHA03209 serine/threonine kina 100.0 4.4E-33 9.6E-38 320.5 20.4 193 816-1024 63-256 (357)
231 cd05632 STKc_GRK5 Catalytic do 100.0 8.8E-33 1.9E-37 308.3 22.0 252 821-1096 2-261 (285)
232 cd06624 STKc_ASK Catalytic dom 100.0 5.7E-33 1.2E-37 307.1 20.1 258 815-1096 4-265 (268)
233 KOG0577 Serine/threonine prote 100.0 4.5E-34 9.7E-39 312.3 10.9 249 821-1100 28-282 (948)
234 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.3E-33 9.3E-38 311.2 19.3 256 820-1098 2-264 (286)
235 cd08221 STKc_Nek9 Catalytic do 100.0 7.5E-33 1.6E-37 303.9 20.8 252 820-1097 1-254 (256)
236 cd07874 STKc_JNK3 Catalytic do 100.0 2.4E-33 5.3E-38 323.2 17.7 269 816-1097 14-312 (355)
237 KOG0584 Serine/threonine prote 100.0 7.7E-34 1.7E-38 317.2 12.9 246 822-1097 43-297 (632)
238 cd06605 PKc_MAPKK Catalytic do 100.0 4.8E-33 1E-37 307.1 19.2 255 820-1097 2-258 (265)
239 cd05056 PTKc_FAK Catalytic dom 100.0 4.9E-33 1.1E-37 308.0 19.0 256 819-1101 6-266 (270)
240 cd06656 STKc_PAK3 Catalytic do 100.0 5.6E-33 1.2E-37 311.7 19.7 252 819-1098 19-271 (297)
241 cd06609 STKc_MST3_like Catalyt 100.0 5E-33 1.1E-37 308.6 18.9 252 820-1099 2-254 (274)
242 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.4E-33 1.2E-37 318.8 19.7 270 814-1098 10-300 (343)
243 cd05046 PTK_CCK4 Pseudokinase 100.0 5.2E-33 1.1E-37 308.6 19.0 258 819-1099 5-275 (275)
244 cd05604 STKc_SGK3 Catalytic do 100.0 4.4E-33 9.5E-38 316.8 18.6 238 825-1091 1-242 (325)
245 cd06655 STKc_PAK2 Catalytic do 100.0 5E-33 1.1E-37 311.9 18.7 254 819-1100 19-273 (296)
246 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-32 2.4E-37 307.9 21.5 269 819-1096 1-283 (286)
247 cd05627 STKc_NDR2 Catalytic do 100.0 4.9E-33 1.1E-37 321.1 19.1 202 820-1027 2-239 (360)
248 cd06637 STKc_TNIK Catalytic do 100.0 7.2E-33 1.6E-37 307.0 19.7 254 816-1096 3-269 (272)
249 cd07844 STKc_PCTAIRE_like Cata 100.0 9.1E-33 2E-37 309.5 20.7 268 819-1096 5-288 (291)
250 cd07867 STKc_CDC2L6 Catalytic 100.0 7.4E-33 1.6E-37 314.3 20.1 196 824-1026 6-218 (317)
251 cd06642 STKc_STK25-YSK1 Cataly 100.0 3E-33 6.5E-38 310.9 16.5 249 821-1098 6-255 (277)
252 cd06638 STKc_myosinIIIA Cataly 100.0 3.8E-33 8.3E-38 311.7 17.4 265 809-1098 8-285 (286)
253 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-32 2.4E-37 304.6 20.7 251 820-1096 1-264 (267)
254 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.5E-33 1.6E-37 306.9 19.3 256 820-1096 2-269 (272)
255 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-32 2.6E-37 313.7 21.5 202 819-1026 1-210 (331)
256 cd07875 STKc_JNK1 Catalytic do 100.0 5.5E-33 1.2E-37 321.3 18.9 268 817-1097 22-319 (364)
257 cd07839 STKc_CDK5 Catalytic do 100.0 5.1E-33 1.1E-37 310.3 17.6 270 820-1097 1-282 (284)
258 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8E-33 1.7E-37 306.6 19.0 239 826-1098 2-274 (274)
259 cd08227 PK_STRAD_alpha Pseudok 100.0 7.6E-33 1.6E-37 315.2 18.8 200 823-1026 2-212 (327)
260 cd06645 STKc_MAP4K3 Catalytic 100.0 9.3E-33 2E-37 305.2 18.9 253 819-1096 9-265 (267)
261 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2E-32 4.3E-37 306.7 21.8 270 817-1096 3-288 (291)
262 KOG0579 Ste20-like serine/thre 100.0 2.2E-34 4.7E-39 316.1 5.7 255 820-1100 33-293 (1187)
263 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2.7E-32 5.8E-37 304.9 22.7 262 820-1098 2-268 (287)
264 cd06651 STKc_MEKK3 Catalytic d 100.0 1.7E-32 3.6E-37 303.0 20.7 252 819-1096 2-261 (266)
265 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.7E-32 3.8E-37 301.5 20.5 238 825-1098 1-259 (259)
266 KOG4250 TANK binding protein k 100.0 2.7E-33 5.8E-38 316.5 14.1 205 821-1031 15-231 (732)
267 cd06644 STKc_STK10_LOK Catalyt 100.0 1.6E-32 3.5E-37 307.5 20.5 255 819-1099 12-272 (292)
268 cd06613 STKc_MAP4K3_like Catal 100.0 2.6E-32 5.7E-37 300.7 21.6 254 819-1096 3-260 (262)
269 PTZ00266 NIMA-related protein 100.0 1.3E-32 2.9E-37 335.1 21.1 256 818-1096 12-295 (1021)
270 cd05623 STKc_MRCK_alpha Cataly 100.0 1.8E-32 3.9E-37 312.6 20.5 257 819-1097 1-267 (332)
271 cd06643 STKc_SLK Catalytic dom 100.0 1.4E-32 3E-37 306.4 19.2 252 821-1098 7-264 (282)
272 cd08528 STKc_Nek10 Catalytic d 100.0 1.9E-32 4E-37 303.2 20.0 255 820-1099 1-269 (269)
273 smart00219 TyrKc Tyrosine kina 100.0 2E-32 4.4E-37 300.7 20.1 252 821-1097 1-258 (258)
274 cd08223 STKc_Nek4 Catalytic do 100.0 2E-32 4.4E-37 300.6 19.9 251 820-1096 1-254 (257)
275 cd05624 STKc_MRCK_beta Catalyt 100.0 7.3E-33 1.6E-37 315.6 16.9 257 819-1097 1-267 (331)
276 cd07846 STKc_CDKL2_3 Catalytic 100.0 8E-33 1.7E-37 309.1 16.9 269 819-1096 1-283 (286)
277 cd06632 STKc_MEKK1_plant Catal 100.0 4E-32 8.8E-37 298.4 22.2 249 820-1096 1-255 (258)
278 cd07832 STKc_CCRK Catalytic do 100.0 2.3E-32 4.9E-37 305.4 20.4 270 820-1097 1-283 (286)
279 cd08218 STKc_Nek1 Catalytic do 100.0 1.9E-32 4.1E-37 300.7 18.8 251 820-1096 1-253 (256)
280 PTZ00284 protein kinase; Provi 100.0 2.6E-32 5.6E-37 325.6 21.4 268 816-1099 126-441 (467)
281 cd07836 STKc_Pho85 Catalytic d 100.0 4E-32 8.6E-37 303.1 21.5 270 820-1096 1-281 (284)
282 KOG0596 Dual specificity; seri 100.0 3.7E-33 8.1E-38 305.0 12.8 257 819-1099 361-630 (677)
283 cd06617 PKc_MKK3_6 Catalytic d 100.0 3.2E-32 7E-37 303.7 20.7 255 819-1098 1-263 (283)
284 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.3E-32 4.9E-37 303.2 19.3 257 821-1100 1-272 (273)
285 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-32 2.8E-37 306.4 17.0 255 818-1098 4-264 (280)
286 cd06639 STKc_myosinIIIB Cataly 100.0 1.6E-32 3.5E-37 307.4 17.9 260 812-1096 15-287 (291)
287 cd08220 STKc_Nek8 Catalytic do 100.0 3.1E-32 6.8E-37 298.9 19.6 250 820-1096 1-253 (256)
288 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 8.3E-33 1.8E-37 303.9 15.0 241 825-1098 1-258 (258)
289 cd06641 STKc_MST3 Catalytic do 100.0 3.8E-32 8.3E-37 302.0 20.3 249 820-1097 5-254 (277)
290 cd05586 STKc_Sck1_like Catalyt 100.0 1.1E-32 2.4E-37 314.3 16.1 243 827-1097 1-254 (330)
291 cd05083 PTKc_Chk Catalytic dom 100.0 3.1E-32 6.7E-37 298.6 18.9 247 819-1099 6-253 (254)
292 cd06647 STKc_PAK_I Catalytic d 100.0 3.8E-32 8.2E-37 304.4 19.7 251 819-1097 19-270 (293)
293 KOG0607 MAP kinase-interacting 100.0 3.9E-33 8.4E-38 284.9 10.4 267 808-1098 72-363 (463)
294 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-31 2.3E-36 296.1 22.7 252 820-1096 2-256 (264)
295 cd06652 STKc_MEKK2 Catalytic d 100.0 5.8E-32 1.3E-36 298.5 20.5 253 819-1097 2-262 (265)
296 cd06658 STKc_PAK5 Catalytic do 100.0 4.2E-32 9.1E-37 303.7 19.3 251 820-1098 23-274 (292)
297 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.3E-32 7.2E-37 303.4 18.2 260 810-1096 7-279 (282)
298 cd06626 STKc_MEKK4 Catalytic d 100.0 9.5E-32 2.1E-36 296.6 21.6 254 820-1096 1-261 (264)
299 cd06917 STKc_NAK1_like Catalyt 100.0 4.9E-32 1.1E-36 301.2 19.5 252 820-1099 2-258 (277)
300 cd07860 STKc_CDK2_3 Catalytic 100.0 6.3E-32 1.4E-36 301.5 20.3 269 820-1096 1-281 (284)
301 cd06630 STKc_MEKK1 Catalytic d 100.0 9.9E-32 2.1E-36 297.2 21.5 255 820-1096 1-264 (268)
302 cd08217 STKc_Nek2 Catalytic do 100.0 6.1E-32 1.3E-36 298.1 19.6 255 820-1096 1-262 (265)
303 cd07831 STKc_MOK Catalytic dom 100.0 9.6E-32 2.1E-36 299.7 21.4 264 821-1096 1-279 (282)
304 cd05580 STKc_PKA Catalytic dom 100.0 1.1E-31 2.3E-36 300.5 21.6 248 819-1098 1-256 (290)
305 cd07841 STKc_CDK7 Catalytic do 100.0 7.8E-32 1.7E-36 303.0 20.4 269 820-1097 1-283 (298)
306 cd07833 STKc_CDKL Catalytic do 100.0 5.9E-32 1.3E-36 302.4 19.3 265 820-1096 2-285 (288)
307 cd05574 STKc_phototropin_like 100.0 4.8E-32 1E-36 307.4 18.8 255 819-1096 1-289 (316)
308 cd06608 STKc_myosinIII_like Ca 100.0 5.9E-32 1.3E-36 300.0 18.8 255 817-1096 4-272 (275)
309 cd07849 STKc_ERK1_2_like Catal 100.0 4.1E-32 8.8E-37 310.5 17.7 270 818-1096 4-292 (336)
310 KOG1035 eIF-2alpha kinase GCN2 100.0 9.6E-33 2.1E-37 327.0 12.7 253 819-1096 479-871 (1351)
311 cd05578 STKc_Yank1 Catalytic d 100.0 6.2E-32 1.4E-36 297.0 18.5 250 820-1096 1-255 (258)
312 cd06659 STKc_PAK6 Catalytic do 100.0 7.9E-32 1.7E-36 302.3 19.4 247 824-1098 26-273 (297)
313 cd06614 STKc_PAK Catalytic dom 100.0 9.4E-32 2E-36 300.4 19.7 255 817-1098 17-272 (286)
314 cd07843 STKc_CDC2L1 Catalytic 100.0 1.1E-31 2.4E-36 300.9 20.0 269 819-1096 5-290 (293)
315 cd06607 STKc_TAO Catalytic dom 100.0 1.7E-31 3.8E-36 301.4 21.0 251 819-1100 15-271 (307)
316 KOG0200 Fibroblast/platelet-de 100.0 9.8E-32 2.1E-36 325.8 20.2 260 819-1099 296-578 (609)
317 KOG0986 G protein-coupled rece 100.0 8.2E-33 1.8E-37 295.2 9.4 201 819-1026 185-388 (591)
318 cd05609 STKc_MAST Catalytic do 100.0 1.8E-31 3.8E-36 301.0 20.8 256 820-1099 2-273 (305)
319 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-31 3.4E-36 300.1 20.0 271 819-1096 1-291 (295)
320 cd07842 STKc_CDK8_like Catalyt 100.0 1.8E-31 3.9E-36 302.8 20.5 273 820-1096 1-313 (316)
321 cd06648 STKc_PAK_II Catalytic 100.0 1.6E-31 3.6E-36 298.0 19.8 252 820-1099 20-272 (285)
322 PHA03390 pk1 serine/threonine- 100.0 5.6E-31 1.2E-35 290.7 23.8 251 811-1096 6-262 (267)
323 cd07850 STKc_JNK Catalytic dom 100.0 1.8E-31 4E-36 307.2 20.7 269 816-1097 13-312 (353)
324 cd05122 PKc_STE Catalytic doma 100.0 2.2E-31 4.9E-36 291.1 20.2 250 820-1096 1-251 (253)
325 cd07835 STKc_CDK1_like Catalyt 100.0 1.4E-31 3.1E-36 298.4 18.8 268 821-1096 1-280 (283)
326 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-31 4.1E-36 301.4 19.2 272 818-1099 6-293 (309)
327 cd05572 STKc_cGK_PKG Catalytic 100.0 5.7E-31 1.2E-35 290.0 22.1 246 827-1098 1-254 (262)
328 cd06635 STKc_TAO1 Catalytic do 100.0 4.7E-31 1E-35 299.1 21.9 252 821-1103 27-284 (317)
329 cd06616 PKc_MKK4 Catalytic dom 100.0 1E-31 2.2E-36 300.6 16.0 257 820-1097 5-268 (288)
330 cd07840 STKc_CDK9_like Catalyt 100.0 4.5E-31 9.7E-36 295.0 21.2 267 821-1096 1-284 (287)
331 KOG1024 Receptor-like protein 100.0 2.8E-32 6.1E-37 285.6 10.4 269 813-1104 278-559 (563)
332 cd07865 STKc_CDK9 Catalytic do 100.0 3.7E-31 8E-36 299.4 20.5 271 818-1096 11-307 (310)
333 cd05633 STKc_GRK3 Catalytic do 100.0 5.3E-31 1.2E-35 292.8 21.4 246 826-1099 1-258 (279)
334 cd06618 PKc_MKK7 Catalytic dom 100.0 3.4E-31 7.3E-36 297.4 19.9 254 819-1098 15-275 (296)
335 cd06606 STKc_MAPKKK Catalytic 100.0 7.7E-31 1.7E-35 288.1 22.4 253 820-1096 1-257 (260)
336 cd08216 PK_STRAD Pseudokinase 100.0 4.3E-31 9.3E-36 299.3 20.6 269 825-1099 8-298 (314)
337 cd05577 STKc_GRK Catalytic dom 100.0 5.8E-31 1.3E-35 292.5 21.2 246 827-1096 1-254 (277)
338 KOG0666 Cyclin C-dependent kin 100.0 4.3E-32 9.4E-37 276.5 10.9 206 817-1026 22-242 (438)
339 PHA02882 putative serine/threo 100.0 4.1E-31 8.9E-36 296.1 20.0 259 819-1097 12-293 (294)
340 PLN00009 cyclin-dependent kina 100.0 4.4E-31 9.6E-36 296.2 20.2 271 819-1097 2-285 (294)
341 cd08225 STKc_Nek5 Catalytic do 100.0 1.9E-31 4.1E-36 292.8 16.7 251 820-1096 1-254 (257)
342 KOG0586 Serine/threonine prote 100.0 1.7E-31 3.7E-36 298.3 16.0 253 818-1100 55-310 (596)
343 cd07864 STKc_CDK12 Catalytic d 100.0 5.1E-31 1.1E-35 297.0 20.0 272 816-1096 4-299 (302)
344 cd07855 STKc_ERK5 Catalytic do 100.0 2.6E-31 5.6E-36 303.6 17.7 274 818-1099 4-297 (334)
345 cd07830 STKc_MAK_like Catalyti 100.0 5.9E-31 1.3E-35 293.5 20.0 266 821-1096 1-280 (283)
346 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.4E-31 5.3E-36 304.1 17.2 268 818-1096 4-291 (337)
347 PHA03210 serine/threonine kina 100.0 1.6E-31 3.6E-36 319.5 16.3 276 818-1098 147-456 (501)
348 cd07838 STKc_CDK4_6_like Catal 100.0 1.5E-30 3.2E-35 290.9 23.0 267 821-1096 1-284 (287)
349 cd05118 STKc_CMGC Catalytic do 100.0 4.8E-31 1E-35 294.2 18.9 267 821-1096 1-280 (283)
350 cd08226 PK_STRAD_beta Pseudoki 100.0 5.8E-31 1.3E-35 299.9 19.9 270 825-1099 4-311 (328)
351 cd08530 STKc_CNK2-like Catalyt 100.0 2.7E-31 5.8E-36 291.5 16.5 250 820-1096 1-253 (256)
352 cd07852 STKc_MAPK15 Catalytic 100.0 3.1E-31 6.7E-36 303.4 17.5 270 817-1096 5-295 (337)
353 KOG4645 MAPKKK (MAP kinase kin 100.0 8.3E-33 1.8E-37 328.8 4.0 257 818-1099 1234-1497(1509)
354 cd08215 STKc_Nek Catalytic dom 100.0 7.3E-31 1.6E-35 288.1 19.2 252 820-1096 1-255 (258)
355 cd06657 STKc_PAK4 Catalytic do 100.0 1E-30 2.2E-35 292.5 20.6 247 824-1098 25-272 (292)
356 cd06627 STKc_Cdc7_like Catalyt 100.0 2.1E-30 4.6E-35 283.9 22.6 249 820-1096 1-251 (254)
357 KOG0983 Mitogen-activated prot 100.0 1.8E-31 3.9E-36 267.5 11.6 251 822-1097 95-350 (391)
358 cd05613 STKc_MSK1_N N-terminal 100.0 2E-30 4.3E-35 290.3 21.5 253 820-1096 1-268 (290)
359 cd05579 STKc_MAST_like Catalyt 100.0 3.7E-31 8.1E-36 291.8 15.3 247 827-1098 1-256 (265)
360 cd07877 STKc_p38alpha_MAPK14 C 100.0 1.1E-30 2.4E-35 299.4 19.6 274 810-1098 8-302 (345)
361 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.4E-30 3E-35 287.3 19.5 253 819-1097 2-262 (264)
362 KOG0690 Serine/threonine prote 100.0 1.5E-31 3.2E-36 273.5 10.4 201 819-1027 168-371 (516)
363 cd05606 STKc_beta_ARK Catalyti 100.0 4.7E-30 1E-34 285.2 23.0 246 826-1099 1-258 (278)
364 cd05581 STKc_PDK1 Catalytic do 100.0 1.1E-30 2.3E-35 290.9 17.6 251 819-1096 1-277 (280)
365 cd07879 STKc_p38delta_MAPK13 C 100.0 1.1E-30 2.3E-35 299.3 17.8 268 818-1100 14-303 (342)
366 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.7E-30 3.7E-35 295.5 19.2 270 814-1097 5-289 (328)
367 cd05583 STKc_MSK_N N-terminal 100.0 2.3E-30 5E-35 289.5 20.0 257 820-1100 1-267 (288)
368 cd06634 STKc_TAO2 Catalytic do 100.0 1.8E-30 4E-35 293.0 19.0 253 819-1102 15-273 (308)
369 cd07834 STKc_MAPK Catalytic do 100.0 1.3E-30 2.9E-35 297.5 17.7 269 820-1097 1-290 (330)
370 cd07866 STKc_BUR1 Catalytic do 100.0 1.5E-30 3.3E-35 294.5 17.8 270 818-1096 7-308 (311)
371 cd05611 STKc_Rim15_like Cataly 100.0 3.5E-30 7.6E-35 283.4 19.9 242 825-1095 2-247 (260)
372 cd07829 STKc_CDK_like Catalyti 100.0 2E-30 4.3E-35 289.0 18.1 266 821-1096 1-279 (282)
373 PTZ00024 cyclin-dependent prot 100.0 3.5E-30 7.6E-35 294.6 20.0 272 819-1100 8-317 (335)
374 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.9E-30 4.2E-35 297.2 17.8 268 816-1097 12-299 (343)
375 KOG0604 MAP kinase-activated p 100.0 8.8E-31 1.9E-35 266.0 13.0 256 817-1100 59-326 (400)
376 KOG0662 Cyclin-dependent kinas 100.0 1.9E-30 4.1E-35 244.0 13.6 270 820-1097 3-284 (292)
377 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.4E-30 3.1E-35 298.3 15.6 269 819-1097 5-301 (342)
378 cd06633 STKc_TAO3 Catalytic do 100.0 5.5E-30 1.2E-34 289.7 20.0 246 821-1097 23-274 (313)
379 cd08222 STKc_Nek11 Catalytic d 100.0 2.4E-30 5.2E-35 284.7 16.4 251 820-1096 1-257 (260)
380 KOG4236 Serine/threonine prote 100.0 3E-31 6.5E-36 286.4 8.6 248 824-1098 569-821 (888)
381 cd07857 STKc_MPK1 Catalytic do 100.0 4.9E-30 1.1E-34 292.8 18.5 270 820-1097 1-293 (332)
382 cd07851 STKc_p38 Catalytic dom 100.0 1.6E-30 3.6E-35 297.9 13.8 267 816-1097 12-299 (343)
383 cd05123 STKc_AGC Catalytic dom 100.0 1.1E-29 2.4E-34 277.6 19.7 241 827-1096 1-247 (250)
384 KOG0612 Rho-associated, coiled 100.0 5.3E-31 1.1E-35 309.7 7.7 263 812-1099 68-341 (1317)
385 cd05610 STKc_MASTL Catalytic d 100.0 1.6E-29 3.5E-34 311.5 20.6 146 819-970 4-152 (669)
386 KOG0669 Cyclin T-dependent kin 100.0 2.8E-31 6.1E-36 262.8 3.2 273 820-1100 18-319 (376)
387 KOG0671 LAMMER dual specificit 100.0 2.6E-30 5.5E-35 272.5 10.4 268 818-1098 88-408 (415)
388 KOG1151 Tousled-like protein k 100.0 2.2E-30 4.7E-35 274.5 8.4 259 819-1096 463-741 (775)
389 KOG1006 Mitogen-activated prot 100.0 1.5E-31 3.2E-36 267.3 -1.0 254 823-1096 68-327 (361)
390 KOG0603 Ribosomal protein S6 k 100.0 1.1E-29 2.3E-34 285.6 13.6 243 818-1099 321-566 (612)
391 cd05576 STKc_RPK118_like Catal 100.0 2.6E-29 5.6E-34 272.2 15.8 219 830-1090 4-223 (237)
392 KOG0696 Serine/threonine prote 100.0 4.7E-30 1E-34 269.9 9.3 201 819-1027 349-553 (683)
393 KOG0587 Traf2- and Nck-interac 100.0 5.2E-29 1.1E-33 286.8 17.3 256 816-1097 16-283 (953)
394 PLN03225 Serine/threonine-prot 100.0 1.8E-28 4E-33 294.3 18.7 267 817-1098 130-452 (566)
395 KOG1027 Serine/threonine prote 100.0 1.5E-29 3.2E-34 290.0 8.3 248 821-1097 511-768 (903)
396 PLN03224 probable serine/threo 100.0 2.9E-28 6.3E-33 284.5 17.9 268 818-1099 144-503 (507)
397 smart00220 S_TKc Serine/Threon 100.0 4.5E-28 9.7E-33 263.1 17.8 240 831-1096 1-241 (244)
398 KOG0984 Mitogen-activated prot 100.0 5.5E-29 1.2E-33 240.2 9.0 202 823-1030 50-258 (282)
399 KOG0614 cGMP-dependent protein 100.0 2.9E-29 6.3E-34 270.9 4.7 253 819-1099 420-680 (732)
400 KOG0608 Warts/lats-like serine 100.0 3.2E-28 7E-33 268.4 12.1 204 819-1028 629-875 (1034)
401 KOG0695 Serine/threonine prote 99.9 1.1E-27 2.4E-32 245.7 12.7 200 819-1026 250-453 (593)
402 KOG0668 Casein kinase II, alph 99.9 3.1E-28 6.6E-33 238.2 8.2 264 818-1097 37-323 (338)
403 KOG1290 Serine/threonine prote 99.9 1.3E-26 2.7E-31 250.6 17.4 273 819-1104 78-558 (590)
404 KOG1152 Signal transduction se 99.9 2.8E-27 6E-32 259.7 9.1 198 818-1025 560-770 (772)
405 KOG0664 Nemo-like MAPK-related 99.9 3.2E-28 7E-33 243.5 1.6 269 821-1099 55-346 (449)
406 cd00180 PKc Catalytic domain o 99.9 1.4E-25 3E-30 237.5 20.4 212 827-1097 1-215 (215)
407 KOG0665 Jun-N-terminal kinase 99.9 1.4E-26 3E-31 238.7 9.9 262 819-1097 17-311 (369)
408 KOG1167 Serine/threonine prote 99.9 3.9E-26 8.4E-31 244.8 10.6 270 816-1097 33-382 (418)
409 KOG4237 Extracellular matrix p 99.9 1.8E-27 3.9E-32 250.8 0.2 314 63-396 40-359 (498)
410 KOG1345 Serine/threonine kinas 99.9 6.6E-26 1.4E-30 227.5 9.2 251 818-1095 23-283 (378)
411 KOG0670 U4/U6-associated splic 99.9 4.3E-26 9.3E-31 247.1 7.9 270 816-1097 429-747 (752)
412 KOG0576 Mitogen-activated prot 99.9 1.7E-26 3.7E-31 257.9 4.2 252 819-1096 15-271 (829)
413 KOG4237 Extracellular matrix p 99.9 1.3E-26 2.9E-31 244.3 2.5 397 287-704 67-498 (498)
414 smart00221 STYKc Protein kinas 99.9 2.6E-24 5.7E-29 230.7 18.2 200 821-1026 1-202 (225)
415 PLN03210 Resistant to P. syrin 99.9 7E-24 1.5E-28 276.3 21.7 339 280-633 551-904 (1153)
416 PLN03210 Resistant to P. syrin 99.9 2.4E-23 5.2E-28 271.3 23.2 338 256-609 551-904 (1153)
417 PRK15387 E3 ubiquitin-protein 99.9 1.6E-23 3.5E-28 252.3 15.0 58 652-714 407-465 (788)
418 PRK15387 E3 ubiquitin-protein 99.9 3.4E-23 7.3E-28 249.6 15.2 126 503-645 343-468 (788)
419 PLN00181 protein SPA1-RELATED; 99.9 9.1E-24 2E-28 267.6 9.9 199 872-1098 28-267 (793)
420 smart00750 KIND kinase non-cat 99.9 1.8E-22 4E-27 207.7 14.8 169 901-1100 1-169 (176)
421 PRK15370 E3 ubiquitin-protein 99.9 1.8E-21 3.9E-26 236.7 17.5 289 119-445 178-471 (754)
422 PRK09188 serine/threonine prot 99.9 1.3E-21 2.8E-26 219.2 14.3 166 817-999 16-195 (365)
423 PRK15370 E3 ubiquitin-protein 99.9 1.5E-21 3.2E-26 237.5 15.1 224 311-587 178-401 (754)
424 KOG0195 Integrin-linked kinase 99.8 5.8E-22 1.3E-26 198.8 4.4 251 821-1100 192-446 (448)
425 KOG1164 Casein kinase (serine/ 99.8 4.6E-20 9.9E-25 208.4 19.4 259 820-1100 19-297 (322)
426 KOG0617 Ras suppressor protein 99.8 1.9E-22 4.2E-27 189.2 -0.7 186 523-714 30-219 (264)
427 KOG0590 Checkpoint kinase and 99.8 2E-21 4.3E-26 232.3 6.1 259 822-1099 321-588 (601)
428 KOG1165 Casein kinase (serine/ 99.8 2.4E-19 5.1E-24 185.7 17.6 199 820-1027 29-239 (449)
429 COG0515 SPS1 Serine/threonine 99.8 7.7E-19 1.7E-23 200.4 22.4 261 821-1096 2-275 (384)
430 KOG1163 Casein kinase (serine/ 99.8 5.3E-19 1.2E-23 175.2 11.1 201 818-1027 14-224 (341)
431 KOG0617 Ras suppressor protein 99.8 9.6E-21 2.1E-25 177.8 -1.2 177 501-684 32-212 (264)
432 PRK10359 lipopolysaccharide co 99.8 2.6E-19 5.5E-24 186.2 8.5 171 818-1018 30-216 (232)
433 cd05147 RIO1_euk RIO kinase fa 99.8 9.8E-19 2.1E-23 180.6 11.7 141 824-973 2-168 (190)
434 KOG1240 Protein kinase contain 99.8 2.6E-19 5.6E-24 211.1 4.9 252 820-1100 24-295 (1431)
435 KOG1023 Natriuretic peptide re 99.8 3.6E-18 7.8E-23 194.2 13.9 216 870-1102 1-226 (484)
436 PRK12274 serine/threonine prot 99.8 3.9E-18 8.4E-23 173.0 11.9 188 822-1027 5-210 (218)
437 cd05145 RIO1_like RIO kinase f 99.7 9.9E-18 2.1E-22 174.0 14.1 141 824-974 2-169 (190)
438 cd00116 LRR_RI Leucine-rich re 99.7 5E-20 1.1E-24 209.2 -4.1 282 100-419 3-319 (319)
439 KOG1166 Mitotic checkpoint ser 99.7 7.1E-18 1.5E-22 204.5 13.5 196 818-1023 697-902 (974)
440 cd00116 LRR_RI Leucine-rich re 99.7 7.3E-20 1.6E-24 207.9 -3.5 162 287-467 137-319 (319)
441 KOG4158 BRPK/PTEN-induced prot 99.7 1.3E-17 2.8E-22 176.5 10.7 197 874-1097 274-511 (598)
442 PF14531 Kinase-like: Kinase-l 99.7 2.5E-17 5.5E-22 176.4 10.0 234 820-1087 13-288 (288)
443 KOG0603 Ribosomal protein S6 k 99.7 3.2E-18 6.9E-23 193.6 2.6 187 826-1026 1-193 (612)
444 PRK10345 hypothetical protein; 99.7 3.8E-16 8.2E-21 162.5 13.8 137 821-969 4-156 (210)
445 smart00090 RIO RIO-like kinase 99.6 1.1E-15 2.4E-20 163.3 12.1 144 819-973 28-199 (237)
446 PRK14879 serine/threonine prot 99.6 2.5E-15 5.4E-20 159.5 13.0 135 825-971 2-143 (211)
447 cd05144 RIO2_C RIO kinase fami 99.6 2.1E-15 4.6E-20 158.0 12.0 146 813-974 9-177 (198)
448 TIGR03724 arch_bud32 Kae1-asso 99.6 2.5E-15 5.5E-20 157.8 11.0 131 826-971 1-138 (199)
449 PLN03150 hypothetical protein; 99.6 1.8E-15 3.9E-20 184.4 11.1 153 22-178 366-526 (623)
450 PRK09605 bifunctional UGMP fam 99.6 5.6E-15 1.2E-19 178.5 14.1 139 818-972 332-477 (535)
451 KOG1033 eIF-2alpha kinase PEK/ 99.6 3.8E-16 8.2E-21 173.7 2.5 124 890-1019 330-457 (516)
452 KOG0532 Leucine-rich repeat (L 99.6 6.3E-16 1.4E-20 171.2 1.3 173 503-685 76-248 (722)
453 KOG0532 Leucine-rich repeat (L 99.6 5.3E-16 1.1E-20 171.8 0.6 181 524-715 73-254 (722)
454 KOG0606 Microtubule-associated 99.6 2.3E-15 5E-20 178.4 5.6 165 819-1027 83-261 (1205)
455 PLN03150 hypothetical protein; 99.5 8.9E-15 1.9E-19 178.4 7.3 111 624-735 420-532 (623)
456 cd05119 RIO RIO kinase family, 99.5 8.3E-14 1.8E-18 144.7 11.4 138 824-974 2-166 (187)
457 cd05120 APH_ChoK_like Aminogly 99.5 1.8E-13 3.8E-18 136.7 12.0 135 823-971 2-138 (155)
458 PRK01723 3-deoxy-D-manno-octul 99.5 5.8E-13 1.3E-17 142.8 13.7 137 824-972 36-192 (239)
459 COG4886 Leucine-rich repeat (L 99.4 1.4E-13 3.1E-18 160.9 8.7 198 506-712 97-295 (394)
460 KOG0590 Checkpoint kinase and 99.4 2.7E-14 5.8E-19 171.3 1.4 258 819-1096 20-286 (601)
461 COG4886 Leucine-rich repeat (L 99.4 2.3E-13 5E-18 159.1 8.6 175 431-612 116-291 (394)
462 KOG1266 Protein kinase [Signal 99.3 8.5E-13 1.8E-17 137.4 6.3 216 864-1103 115-338 (458)
463 TIGR01982 UbiB 2-polyprenylphe 99.3 1.3E-11 2.9E-16 143.9 12.4 142 824-973 122-308 (437)
464 KOG0601 Cyclin-dependent kinas 99.2 3.3E-11 7.2E-16 137.6 7.6 250 820-1096 115-379 (524)
465 KOG1259 Nischarin, modulator o 99.1 1E-11 2.2E-16 127.6 0.3 110 501-616 306-416 (490)
466 KOG1909 Ran GTPase-activating 99.1 3.2E-12 7E-17 135.0 -3.8 249 89-348 24-311 (382)
467 KOG0531 Protein phosphatase 1, 99.1 2.5E-11 5.5E-16 142.0 2.9 221 477-708 70-291 (414)
468 cd05151 ChoK Choline Kinase (C 99.1 2E-10 4.2E-15 117.3 8.8 127 824-970 3-135 (170)
469 KOG1259 Nischarin, modulator o 99.1 4.4E-11 9.6E-16 122.9 2.2 136 498-640 280-416 (490)
470 PRK04750 ubiB putative ubiquin 99.1 1.4E-10 3E-15 136.5 6.5 147 819-974 120-316 (537)
471 KOG0531 Protein phosphatase 1, 99.1 2.2E-11 4.7E-16 142.6 -0.4 106 117-228 70-175 (414)
472 KOG1909 Ran GTPase-activating 99.1 2.9E-12 6.4E-17 135.3 -7.2 254 114-395 25-310 (382)
473 KOG3207 Beta-tubulin folding c 99.0 6.6E-11 1.4E-15 128.3 2.3 188 501-692 120-321 (505)
474 KOG1243 Protein kinase [Genera 99.0 1.3E-09 2.7E-14 125.6 12.4 167 839-1020 33-199 (690)
475 PF14580 LRR_9: Leucine-rich r 99.0 1.1E-10 2.4E-15 116.8 2.6 126 497-628 14-146 (175)
476 cd05146 RIO3_euk RIO kinase fa 99.0 3.2E-09 7E-14 108.5 13.1 137 825-973 3-175 (197)
477 KOG0601 Cyclin-dependent kinas 99.0 2.1E-10 4.6E-15 131.1 4.2 250 816-1099 262-517 (524)
478 KOG3207 Beta-tubulin folding c 99.0 8.2E-11 1.8E-15 127.6 -0.2 160 188-372 118-284 (505)
479 COG3642 Mn2+-dependent serine/ 99.0 4.7E-09 1E-13 102.8 11.3 133 825-972 2-141 (204)
480 KOG4658 Apoptotic ATPase [Sign 99.0 7.3E-10 1.6E-14 138.0 7.1 151 93-246 521-675 (889)
481 cd05154 ACAD10_11_like Acyl-Co 98.9 4.7E-09 1E-13 112.3 12.0 142 825-970 4-205 (223)
482 PF14580 LRR_9: Leucine-rich r 98.9 7.7E-10 1.7E-14 110.7 4.3 16 405-420 111-126 (175)
483 KOG3087 Serine/threonine prote 98.9 1.3E-08 2.9E-13 98.8 12.6 144 823-971 11-165 (229)
484 KOG4658 Apoptotic ATPase [Sign 98.9 8.1E-10 1.8E-14 137.6 4.3 250 95-349 545-808 (889)
485 PF08263 LRRNT_2: Leucine rich 98.8 1.9E-09 4.1E-14 81.1 3.3 41 27-67 2-43 (43)
486 COG4248 Uncharacterized protei 98.8 7.3E-08 1.6E-12 104.6 14.8 193 822-1026 14-224 (637)
487 KOG0606 Microtubule-associated 98.7 3.6E-09 7.9E-14 126.7 2.0 203 819-1027 804-1038(1205)
488 PRK15123 lipopolysaccharide co 98.7 1.8E-07 3.9E-12 101.4 13.9 142 825-971 28-194 (268)
489 PF01163 RIO1: RIO1 family; I 98.6 1.3E-07 2.8E-12 96.5 10.5 127 834-973 1-157 (188)
490 PF13855 LRR_8: Leucine rich r 98.6 2E-08 4.4E-13 82.6 3.7 61 95-155 1-61 (61)
491 PF13855 LRR_8: Leucine rich r 98.6 1.8E-08 4E-13 82.8 3.3 59 503-561 2-60 (61)
492 COG0478 RIO-like serine/threon 98.6 2.1E-07 4.6E-12 96.9 9.4 136 822-972 94-252 (304)
493 KOG3741 Poly(A) ribonuclease s 98.6 1.9E-06 4.1E-11 96.5 17.3 169 831-1022 288-474 (655)
494 KOG1859 Leucine-rich repeat pr 98.5 5.3E-09 1.1E-13 119.8 -4.7 126 264-396 165-292 (1096)
495 KOG4579 Leucine-rich repeat (L 98.4 5E-08 1.1E-12 89.7 0.7 109 552-665 55-164 (177)
496 KOG1859 Leucine-rich repeat pr 98.4 2.4E-08 5.1E-13 114.6 -1.9 127 502-635 164-292 (1096)
497 KOG2982 Uncharacterized conser 98.4 2.7E-08 6E-13 102.9 -1.8 64 117-180 69-134 (418)
498 KOG4579 Leucine-rich repeat (L 98.4 3.1E-08 6.6E-13 91.1 -1.6 136 504-644 29-168 (177)
499 PF06293 Kdo: Lipopolysacchari 98.4 2.4E-06 5.2E-11 89.8 11.1 108 859-972 54-171 (206)
500 PRK09902 hypothetical protein; 98.3 1.5E-05 3.1E-10 81.8 13.9 139 827-970 26-178 (216)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=5.7e-115 Score=1130.86 Aligned_cols=915 Identities=34% Similarity=0.549 Sum_probs=644.7
Q ss_pred ChhhHHHHHHHHHhccCCCCcccCCCCCCCCCCceeeeEEecCCCCcEEEEEecccCCccccCCcccCCCCccEeecCCC
Q 001275 26 LNGDGVALLSLMRHWNSVPPLIISSWNSSDSTPCQWVGIECDDDAHNVVSFNLSSYGVSGQLGPEIGHLSKLQTIDLSSN 105 (1109)
Q Consensus 26 ~~~~~~all~~~~~~~~~~~~~l~sW~~~~~~~c~w~gv~C~~~~~~v~~l~l~~~~l~~~~~~~l~~l~~L~~L~L~~n 105 (1109)
.++|++||++||+++. +|...+.+|+.. .+||.|.||+|+. .++|+.++|+++.++|.+++.+..+++|++|+|++|
T Consensus 27 ~~~~~~~l~~~~~~~~-~~~~~~~~w~~~-~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n 103 (968)
T PLN00113 27 HAEELELLLSFKSSIN-DPLKYLSNWNSS-ADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNN 103 (968)
T ss_pred CHHHHHHHHHHHHhCC-CCcccCCCCCCC-CCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCC
Confidence 5689999999999995 577788999754 4689999999985 468999999999999999999999999999999999
Q ss_pred cccccCCCCCC-CCCCCcEeeccCccccCCCCccccccCccceeccccccccccCCcccccccccceecccccccccccc
Q 001275 106 NFSGNIPPKLG-NCSALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYVFLNNNSLSGSIP 184 (1109)
Q Consensus 106 ~l~~~~p~~l~-~l~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p 184 (1109)
+++|.+|..+. .+++|++|+|++|.+++.+|. +.+++|++|+|++|.+++.+|..++.+++|++|++++|.+.+.+|
T Consensus 104 ~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p 181 (968)
T PLN00113 104 QLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIP 181 (968)
T ss_pred ccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCC
Confidence 99988887755 889999999999999887775 457888888888888877777777777777777777777777777
Q ss_pred cccCCCcccceeecccccCCCCcccccccccCccEEEeccccccCcCchhcccccccccccccCcccCCcccccccCCCC
Q 001275 185 RNVGDLKEVEALWLFSNRLSGTIPESIGNCYRLQELYLNENKLMGFLPESLSNLENLVYLDVGDNNLEGRINFGSEKCKN 264 (1109)
Q Consensus 185 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 264 (1109)
..++++++|++|+|++|++++.+|..++++++|++|+|++|++++.+|..++++++|++|++++|++++
T Consensus 182 ~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~----------- 250 (968)
T PLN00113 182 NSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTG----------- 250 (968)
T ss_pred hhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceecc-----------
Confidence 777777777777777777777777777777777777777776666666666666655555555555554
Q ss_pred cchhccccccccCCCCcccccccCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCCccccccccceeeccC
Q 001275 265 LTFLDLSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYA 344 (1109)
Q Consensus 265 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 344 (1109)
.+|..++++++|+.|++++|++++.+|..+..+++|++|++++|.+++.+|..+.++++|+.|++++
T Consensus 251 -------------~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~ 317 (968)
T PLN00113 251 -------------PIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFS 317 (968)
T ss_pred -------------ccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCC
Confidence 4455555556666666666666666666666677777777777777777777777777777777777
Q ss_pred cccCCCCCccccCCCCccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcccCC
Q 001275 345 NQLEGEIPDELGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIP 424 (1109)
Q Consensus 345 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 424 (1109)
|.+.+.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|
T Consensus 318 n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p 397 (968)
T PLN00113 318 NNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIP 397 (968)
T ss_pred CccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCC
Confidence 77777777777778888888888888887788777777777777777766665555555544444444444444433322
Q ss_pred ccccCCCCCceEEecCCcccccCCCCcccCccceEEECCCcccccCCCcccCCCCccchhhccCcccCCCCCCCCCCCCC
Q 001275 425 QSLGINSSLMQLDFINNSFTGEIPPNLCFGKQLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQNQLTGALPEFSKNPVL 504 (1109)
Q Consensus 425 ~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~L 504 (1109)
..+ ..+++|
T Consensus 398 ~~~-----------------------------------------------------------------------~~~~~L 406 (968)
T PLN00113 398 KSL-----------------------------------------------------------------------GACRSL 406 (968)
T ss_pred HHH-----------------------------------------------------------------------hCCCCC
Confidence 222 222334
Q ss_pred ceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEecCc
Q 001275 505 SHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFN 584 (1109)
Q Consensus 505 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 584 (1109)
+.|++++|++++.+|..+.++++|+.|++++|++++.+|..+..+++|+.|+|++|++.+.+|..+. .++|+.||+++|
T Consensus 407 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~~~L~~L~ls~n 485 (968)
T PLN00113 407 RRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFG-SKRLENLDLSRN 485 (968)
T ss_pred CEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccc-cccceEEECcCC
Confidence 4555555555555666666677777777777777777776666666666666666666665555432 344555555555
Q ss_pred cccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCCchhhhhhhhhhcccccccccccC
Q 001275 585 LLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGLTGRIP 664 (1109)
Q Consensus 585 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ip 664 (1109)
+++ +.+|..+..+++|+.|+|++|+++|.+|..++.+++| ..|+|++|.++|.+|
T Consensus 486 ~l~------------------------~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-~~L~Ls~N~l~~~~p 540 (968)
T PLN00113 486 QFS------------------------GAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKL-VSLDLSHNQLSGQIP 540 (968)
T ss_pred ccC------------------------CccChhhhhhhccCEEECcCCcceeeCChHHcCccCC-CEEECCCCcccccCC
Confidence 554 4455555555555556666666666666666666666 357777777777777
Q ss_pred cchhhcccCCeEEccCCcccccCCC-CCccccceEEeeeccccccccchhhhhccCCCCCCCCCCCcccccccCCCCCCC
Q 001275 665 SDLEKLSKLEQLDISSNNLTGTLSP-LSNIHSLVEVNVSYNLFTGPVPETLMNLLGPSPSSFSGNPSLCVKCLSSTDSSC 743 (1109)
Q Consensus 665 ~~l~~l~~L~~L~Ls~N~l~g~~~~-l~~~~~l~~l~~~~n~l~g~~p~~~~~~~~~~~~~~~gn~~~c~~~~~~~~~~c 743 (1109)
..++++++|+.|||++|+++|.+|. +..+++|+.+++++|+++|.+|.. ..|......++.||+++||.......+.|
T Consensus 541 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~~~~~~~~c 619 (968)
T PLN00113 541 ASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPST-GAFLAINASAVAGNIDLCGGDTTSGLPPC 619 (968)
T ss_pred hhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCCCc-chhcccChhhhcCCccccCCccccCCCCC
Confidence 7777888888888888888887777 777788888888888888888842 22333367789999999986543322333
Q ss_pred CCCCCCCCCCCCCccccCCcceEEEeeehhHHHHHHHHHHhheeeEEEeecccc--ccccCC--cCCCcc-----cHHHH
Q 001275 744 FGTSNLRPCDYHSSHQQGLNKVKIVVIALGSSLLTVLVMLGLVSCCLFRRRSKQ--DLEIPA--QEGPSY-----LLKQV 814 (1109)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~--~~~~~~-----~~~~~ 814 (1109)
.. . .+ ....+++++++++++++++++++++++++||++.+ ..+... .+...+ .....
T Consensus 620 ~~---------~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 685 (968)
T PLN00113 620 KR---------V---RK--TPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITI 685 (968)
T ss_pred cc---------c---cc--cceeeeehhHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccchhhhH
Confidence 21 1 11 11122222222222222222222222222222111 111100 000000 00112
Q ss_pred HHHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 815 IEATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 815 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
......|...++||+|+||.||+|.. .+++.||||++..... ...+|++.+++++|||||+++++|.+.+..++
T Consensus 686 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~l 760 (968)
T PLN00113 686 NDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYL 760 (968)
T ss_pred HHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEE
Confidence 23345678889999999999999976 5789999998843211 12356889999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
||||+++|+|.++++. ++|..+.+++.|+|+|++|||+.++++|+|||+||+||+++.++.+++. ||.+....
T Consensus 761 v~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~ 833 (968)
T PLN00113 761 IHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC 833 (968)
T ss_pred EEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc
Confidence 9999999999999963 7899999999999999999997778899999999999999999988875 66554332
Q ss_pred CCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
.. ....+|++|+|||++.+..++.++|||||||++|||+||+.||+...........|++...... ....++|
T Consensus 834 ~~------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 906 (968)
T PLN00113 834 TD------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDC-HLDMWID 906 (968)
T ss_pred cC------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCcc-chhheeC
Confidence 11 1236789999999999999999999999999999999999999776666666777776544332 2334445
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
+...... ....++..++.+++.+||+.||++||+|+||+++|+++..
T Consensus 907 ~~~~~~~--~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 907 PSIRGDV--SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred ccccCCC--CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 4432211 1234556778899999999999999999999999998733
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.7e-62 Score=638.80 Aligned_cols=514 Identities=36% Similarity=0.536 Sum_probs=374.5
Q ss_pred cccceeecccccCCCCcccccccccCccEEEeccccccCcCchhcc-cccccccccccCcccCCcccccccCCCCcchhc
Q 001275 191 KEVEALWLFSNRLSGTIPESIGNCYRLQELYLNENKLMGFLPESLS-NLENLVYLDVGDNNLEGRINFGSEKCKNLTFLD 269 (1109)
Q Consensus 191 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 269 (1109)
.+++.|+|++|.+++.+|..|..+++|+.|+|++|++++.+|..+. ++++|++|+|++|++++.+|. ..+++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L---- 142 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNL---- 142 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCC----
Confidence 3566666666666666666666666666666666666655555433 566666666666666554443 234444
Q ss_pred cccccccCCCCcccccccCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCCccccccccceeeccCcccCC
Q 001275 270 LSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEG 349 (1109)
Q Consensus 270 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 349 (1109)
++|++++|.+++.+|..++.+++|++|+|++|.+.+.+|..++++++|++|+|++|++.+
T Consensus 143 --------------------~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 202 (968)
T PLN00113 143 --------------------ETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVG 202 (968)
T ss_pred --------------------CEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcC
Confidence 445555554444444445555555555555555554555555555555555555555555
Q ss_pred CCCccccCCCCccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcccCCccccC
Q 001275 350 EIPDELGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQSLGI 429 (1109)
Q Consensus 350 ~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 429 (1109)
.+|..++.+++|++|+|++|++++.+|..+.++++|++|++++|++++.+|..+.++++|+.|++++|++++.+|..++.
T Consensus 203 ~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~ 282 (968)
T PLN00113 203 QIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFS 282 (968)
T ss_pred cCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhh
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred CCCCceEEecCCcccccCCCCcccCccceEEECCCcccccCCCcccCCCCccchhhccCcccCCCCCC-CCCCCCCceEE
Q 001275 430 NSSLMQLDFINNSFTGEIPPNLCFGKQLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQNQLTGALPE-FSKNPVLSHLD 508 (1109)
Q Consensus 430 ~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~-~~~~~~L~~L~ 508 (1109)
+++|++|++++|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|. ++.+++|+.|+
T Consensus 283 l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~ 362 (968)
T PLN00113 283 LQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLD 362 (968)
T ss_pred ccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEE
Confidence 55555566666655555555555566666666666666666666666666666666666666666665 77778899999
Q ss_pred eecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEecCccccC
Q 001275 509 VSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNG 588 (1109)
Q Consensus 509 Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~ 588 (1109)
+++|++++.+|..+..+.+|+.|++++|++.+.+|..++.+++|+.|++++|++++.+|..+..+++|+.||+++|+++|
T Consensus 363 Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 442 (968)
T PLN00113 363 LSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQG 442 (968)
T ss_pred CCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCCchhhhhhhhhhcccccccccccCcchh
Q 001275 589 SIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGLTGRIPSDLE 668 (1109)
Q Consensus 589 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ip~~l~ 668 (1109)
.+|..+..+++|+.|+|++|++.+.+|..+ ..++|+.|++++|+++|.+|..++++..| ..|+|++|+++|.+|..++
T Consensus 443 ~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~p~~~~ 520 (968)
T PLN00113 443 RINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSEL-MQLKLSENKLSGEIPDELS 520 (968)
T ss_pred ccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhcc-CEEECcCCcceeeCChHHc
Confidence 999999999999999999999999998876 45899999999999999999999999999 4799999999999999999
Q ss_pred hcccCCeEEccCCcccccCCC-CCccccceEEeeeccccccccchhhhhccCCCCCCCCCCCccc
Q 001275 669 KLSKLEQLDISSNNLTGTLSP-LSNIHSLVEVNVSYNLFTGPVPETLMNLLGPSPSSFSGNPSLC 732 (1109)
Q Consensus 669 ~l~~L~~L~Ls~N~l~g~~~~-l~~~~~l~~l~~~~n~l~g~~p~~~~~~~~~~~~~~~gn~~~c 732 (1109)
++++|++|||++|+++|.+|. +..+++|+.|++++|.++|.+|..+..+.........+|+..+
T Consensus 521 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~ 585 (968)
T PLN00113 521 SCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHG 585 (968)
T ss_pred CccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCccee
Confidence 999999999999999999998 9999999999999999999999887765333444566776554
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-49 Score=447.54 Aligned_cols=290 Identities=41% Similarity=0.680 Sum_probs=249.6
Q ss_pred CCCcccHHHHHHHhhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeE
Q 001275 805 EGPSYLLKQVIEATENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDF 884 (1109)
Q Consensus 805 ~~~~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 884 (1109)
....|+++++..||++|...++||+|+||.||+|...+++.||||++....... .++|.+|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 456799999999999999999999999999999999999999999875544333 5679999999999999999999999
Q ss_pred EecCCc-eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEE
Q 001275 885 WLRKDC-GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHI 963 (1109)
Q Consensus 885 ~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 963 (1109)
|.+.+. .++|||||++|+|.++++..... .++|..|++||.++|+||+|||+.+.++|+||||||+|||+|+++.+||
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 999984 99999999999999999986543 7899999999999999999999988889999999999999999999999
Q ss_pred ecccCCcccCCCCCCceeeec-ccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCc-cccccHHHHHHHh
Q 001275 964 SDFGIAKLLDKSPASTTSISV-VGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSY-KERTDIVGWVRSV 1041 (1109)
Q Consensus 964 ~DfGla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~-~~~~~~~~~~~~~ 1041 (1109)
+|||+|+..... ....... .||.+|+|||++..+..+.|+|||||||+++|++||+.+.+... .....+..|+...
T Consensus 219 sDFGLa~~~~~~--~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 219 SDFGLAKLGPEG--DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred cCccCcccCCcc--ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 999999755331 1111112 79999999999999999999999999999999999999887654 3444588888777
Q ss_pred hcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1042 WSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1042 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
+... .+.+++|+.+..... ...+++.++..++.+|++.+|++||+|.||+++|+.+.
T Consensus 297 ~~~~-~~~eiiD~~l~~~~~--~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 297 LEEG-KLREIVDPRLKEGEY--PDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHCc-chhheeCCCccCCCC--ChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 7655 788999998763111 01167888999999999999999999999999997653
No 4
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.5e-48 Score=408.82 Aligned_cols=488 Identities=31% Similarity=0.453 Sum_probs=350.4
Q ss_pred CCCcEeeccCccccCCCCccccccCccceeccccccccccCCcccccccccceecccccccccccccccCCCcccceeec
Q 001275 119 SALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYVFLNNNSLSGSIPRNVGDLKEVEALWL 198 (1109)
Q Consensus 119 ~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 198 (1109)
..|+.|++++|.++ .+.+.+.+|..|.+|++.+|+++ ..|++++++.+++.|+.++|+++ .+|+.++.+.+|.+|+.
T Consensus 45 v~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 45 VDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDC 121 (565)
T ss_pred cchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhc
Confidence 44555555555554 23334555555555555555555 55555555555555555555555 55555666666666666
Q ss_pred ccccCCCCcccccccccCccEEEeccccccCcCchhcccccccccccccCcccCCcccccccCCCCcchhccccccccCC
Q 001275 199 FSNRLSGTIPESIGNCYRLQELYLNENKLMGFLPESLSNLENLVYLDVGDNNLEGRINFGSEKCKNLTFLDLSYNRFSGG 278 (1109)
Q Consensus 199 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 278 (1109)
++|.+. .+|++++.+..|+.|+..+|+++. .|+++.++.+|..|++.+|++....
T Consensus 122 s~n~~~-el~~~i~~~~~l~dl~~~~N~i~s-lp~~~~~~~~l~~l~~~~n~l~~l~----------------------- 176 (565)
T KOG0472|consen 122 SSNELK-ELPDSIGRLLDLEDLDATNNQISS-LPEDMVNLSKLSKLDLEGNKLKALP----------------------- 176 (565)
T ss_pred ccccee-ecCchHHHHhhhhhhhcccccccc-CchHHHHHHHHHHhhccccchhhCC-----------------------
Confidence 666665 556666666666666666666663 4555555555555555555554322
Q ss_pred CCcccccccCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCCccccccccceeeccCcccCCCCCcccc-C
Q 001275 279 ISPNLGNCSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEGEIPDELG-Q 357 (1109)
Q Consensus 279 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~-~ 357 (1109)
+..-+++.|++||..+|.++ .+|..++.+.+|..|||.+|++. .+| +|.+|..|++|+++.|+|+ .+|.+.+ +
T Consensus 177 --~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~ 250 (565)
T KOG0472|consen 177 --ENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKH 250 (565)
T ss_pred --HHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcc
Confidence 22223666666666666666 67778888888999999999988 566 8999999999999999998 6777666 8
Q ss_pred CCCccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcccCCccccCCC---CCc
Q 001275 358 LSNLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQSLGINS---SLM 434 (1109)
Q Consensus 358 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~---~L~ 434 (1109)
++++..|||.+|+++ +.|+.++.+.+|++||+|+|.|+ .+|.+++++ .|+.|-+.+|++... ...+-... -|+
T Consensus 251 L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTi-Rr~ii~~gT~~vLK 326 (565)
T KOG0472|consen 251 LNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTI-RREIISKGTQEVLK 326 (565)
T ss_pred cccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHH-HHHHHcccHHHHHH
Confidence 999999999999999 79999999999999999999998 588889999 999999999998732 22221111 111
Q ss_pred eEEecCCcccccCCCCcccCccceEEECCCcccccCCCcccCCCCccchhhccCcccCCCCCCCCCCCCCceEEeecCcc
Q 001275 435 QLDFINNSFTGEIPPNLCFGKQLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQNQLTGALPEFSKNPVLSHLDVSRNNI 514 (1109)
Q Consensus 435 ~L~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~L~~L~Ls~N~i 514 (1109)
+|. -.++...+..- .|.-.+. .-.-.+..|+.....+.+.|+++.-++
T Consensus 327 yLr---s~~~~dglS~s----------------e~~~e~~-------------~t~~~~~~~~~~~~i~tkiL~~s~~ql 374 (565)
T KOG0472|consen 327 YLR---SKIKDDGLSQS----------------EGGTETA-------------MTLPSESFPDIYAIITTKILDVSDKQL 374 (565)
T ss_pred HHH---HhhccCCCCCC----------------ccccccc-------------CCCCCCcccchhhhhhhhhhccccccc
Confidence 110 01111111000 0000000 001123445566777889999999999
Q ss_pred CCCCCCccccccc---ccEEeccCCcccCCcchhhhccccccee-ecccccccccCCccccCCCCccEEEecCccccCCC
Q 001275 515 SGAIPSSIGNSIN---LTSIDFSSNKFSGLMPQELGNLVSLVTL-NISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNGSI 590 (1109)
Q Consensus 515 ~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~L-~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~ 590 (1109)
+ .+|+++..... .+..+++.|++. ++|..+..++.+.+. .+++|.+. .+|..++.+++|..|+|++|-+. .+
T Consensus 375 t-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~L 450 (565)
T KOG0472|consen 375 T-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DL 450 (565)
T ss_pred c-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hc
Confidence 9 67877766555 889999999999 789999998876655 55555555 99999999999999999999998 89
Q ss_pred CcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCC-chhhhhhhhhhcccccccccccCcchhh
Q 001275 591 PSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPS-IGALQDLSYALNLSKNGLTGRIPSDLEK 669 (1109)
Q Consensus 591 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~-~~~l~~l~~~L~L~~N~l~g~ip~~l~~ 669 (1109)
|..++.+..|+.|++|.|+|. .+|.++..+..++.+-.++|++. ++|++ +++|.+| .+|||.+|.+. .||+.+|+
T Consensus 451 P~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~-~vd~~~l~nm~nL-~tLDL~nNdlq-~IPp~Lgn 526 (565)
T KOG0472|consen 451 PEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIG-SVDPSGLKNMRNL-TTLDLQNNDLQ-QIPPILGN 526 (565)
T ss_pred chhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccc-ccChHHhhhhhhc-ceeccCCCchh-hCChhhcc
Confidence 999999999999999999999 89999999999988888889997 55544 8888888 47888888888 78888888
Q ss_pred cccCCeEEccCCccc
Q 001275 670 LSKLEQLDISSNNLT 684 (1109)
Q Consensus 670 l~~L~~L~Ls~N~l~ 684 (1109)
|.+|++|+|++|++.
T Consensus 527 mtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 527 MTNLRHLELDGNPFR 541 (565)
T ss_pred ccceeEEEecCCccC
Confidence 888888888888888
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-44 Score=376.33 Aligned_cols=256 Identities=28% Similarity=0.425 Sum_probs=212.5
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-ceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-CGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 897 (1109)
+++..+.||+|..|+|||+.++ +++.+|+|.+.....+...+++.+|++++++.+||+||+++|.|.... ...++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 3445678999999999999775 578899999966666667788999999999999999999999999988 49999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
|++|||+++++..+ .+++...-+|+.+|++||.|||+ +++||||||||+|||++..|.|||+|||.++.+.+.
T Consensus 160 MDgGSLd~~~k~~g---~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRVG---RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-- 232 (364)
T ss_pred cCCCCHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh--
Confidence 99999999998754 48999999999999999999994 389999999999999999999999999999987654
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
....++||..|||||-+.+..|+.++||||||+.++|+.+|+.|+.+......+....+.....+. .+.+.
T Consensus 233 --~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~p-------pP~lP 303 (364)
T KOG0581|consen 233 --IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEP-------PPRLP 303 (364)
T ss_pred --hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCC-------CCCCC
Confidence 334579999999999999999999999999999999999999999776333344444433332211 01110
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
. ..+..++..++..|+++||.+||+++|+++|=.
T Consensus 304 ~-------~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpf 337 (364)
T KOG0581|consen 304 E-------GEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPF 337 (364)
T ss_pred c-------ccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHH
Confidence 0 023455666777999999999999999998754
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-43 Score=390.88 Aligned_cols=254 Identities=30% Similarity=0.445 Sum_probs=205.2
Q ss_pred CCCceeecccCeEEEEEEeCCCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-ceeEEEEecc
Q 001275 822 NAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-CGIIMYRYME 899 (1109)
Q Consensus 822 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~ 899 (1109)
...+.+|+|+||+||+|.+.....||||++..... .....+|.+|+.++.+++|||||+++|+|.+.. ..++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 33455999999999999999666699999854322 122568999999999999999999999999887 7899999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEEeccCCCCeeeCCCC-cEEEecccCCcccCCCCC
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPP-IVHRDIKPENILLDSEM-EPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~~NIll~~~~-~~kl~DfGla~~~~~~~~ 977 (1109)
+|+|.++++.. ....+++..++++|.+||+|++||| +.+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 124 ~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 99999999874 3456999999999999999999999 777 99999999999999997 99999999998765432
Q ss_pred CceeeecccCcccccccccc--cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 978 STTSISVVGTIGYIAPENAF--TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.......||++|||||++. ...|+.|+|||||||++|||+||+.||..... ..... .+.....
T Consensus 199 -~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~--~~~~~---~v~~~~~--------- 263 (362)
T KOG0192|consen 199 -TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP--VQVAS---AVVVGGL--------- 263 (362)
T ss_pred -ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH--HHHHH---HHHhcCC---------
Confidence 2333478999999999999 66999999999999999999999999975432 11111 1111100
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
... ....+...+..++.+||+.||++||++.|++..|+.+
T Consensus 264 -Rp~----~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 264 -RPP----IPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred -CCC----CCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 000 0111445567788899999999999999999999865
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-43 Score=370.14 Aligned_cols=257 Identities=25% Similarity=0.350 Sum_probs=203.4
Q ss_pred hCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeeccccc------ChHHHHHHHHHHhcCCCCceeeEeeEEecCCce
Q 001275 819 ENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRGHKR------GSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 891 (1109)
+.|...+.+|+|+||.|-+| ..++|+.||||.+....... ...++++|+++|++++|||||++.+++...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 45777899999999999999 45679999999996543222 234568999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC---CcEEEecccC
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE---MEPHISDFGI 968 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfGl 968 (1109)
|+|+||++||+|.+++-..+. +.+....-+++|++.|+.||| +.||+||||||+|||+..+ ..+||+|||+
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred EEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccch
Confidence 999999999999999976543 777778899999999999999 9999999999999999765 6799999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccccCCC---CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAFTTAK---SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~---~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
|+..+.. ..+...+||+.|.|||++.++.+ ..++|+||+||++|-+++|..||.....+.. +.+.+.
T Consensus 326 AK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-l~eQI~------ 395 (475)
T KOG0615|consen 326 AKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-LKEQIL------ 395 (475)
T ss_pred hhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-HHHHHh------
Confidence 9987633 33445799999999999987654 3488999999999999999999976654321 111111
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
..+... .+..+.+-..+..+++.+|+..||++||+++|+++|-|--
T Consensus 396 -------~G~y~f--~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~ 441 (475)
T KOG0615|consen 396 -------KGRYAF--GPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK 441 (475)
T ss_pred -------cCcccc--cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence 111000 0011122233445566699999999999999999986643
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=3.6e-46 Score=390.96 Aligned_cols=492 Identities=27% Similarity=0.379 Sum_probs=369.1
Q ss_pred CcccCCCCccEeecCCCcccccCCCCCCCCCCCcEeeccCccccCCCCccccccCccceeccccccccccCCcccccccc
Q 001275 89 PEIGHLSKLQTIDLSSNNFSGNIPPKLGNCSALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILG 168 (1109)
Q Consensus 89 ~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~ 168 (1109)
..+..-..|+.|++++|.+. .+.+.+.++..|++|++++|+++ ..|.+++.+..++.|+.++|+++ .+|+.++.+.+
T Consensus 39 e~wW~qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~ 115 (565)
T KOG0472|consen 39 ENWWEQVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLIS 115 (565)
T ss_pred hhhhhhcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhh
Confidence 34666677888999999988 55567888999999999999998 68888999999999999999998 89999999999
Q ss_pred cceecccccccccccccccCCCcccceeecccccCCCCcccccccccCccEEEeccccccCcCchhcccccccccccccC
Q 001275 169 LQYVFLNNNSLSGSIPRNVGDLKEVEALWLFSNRLSGTIPESIGNCYRLQELYLNENKLMGFLPESLSNLENLVYLDVGD 248 (1109)
Q Consensus 169 L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 248 (1109)
|+.|+.++|.+. .+|+.++.+..|+.++..+|+++ ..|++++++.+|..|++.+|++....|+.+. ++.|++||..+
T Consensus 116 l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~ 192 (565)
T KOG0472|consen 116 LVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNS 192 (565)
T ss_pred hhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccch
Confidence 999999999998 78888999999999999999998 7888999999999999999999976666555 99999999999
Q ss_pred cccCCcccccccCCCCcchhccccccccCCCCcccccccCCcEEEeecCCCCCcCCcc-ccccccccEEEcCCCCCCCCC
Q 001275 249 NNLEGRINFGSEKCKNLTFLDLSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGSIPSS-FGLLARLSSLDLSENQLSGKI 327 (1109)
Q Consensus 249 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~ 327 (1109)
|-++ .+|..++.+.+|+.|+|.+|++. ..| +|.++..|++|+++.|+|. .+|.. ...+.++..|||.+|+++ ..
T Consensus 193 N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~ 267 (565)
T KOG0472|consen 193 NLLE-TLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EV 267 (565)
T ss_pred hhhh-cCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cC
Confidence 9887 56777899999999999999998 455 8999999999999999998 45554 458999999999999998 78
Q ss_pred CCccccccccceeeccCcccCCCCCccccCCCCccEEEccCccccccCchHHHhh---cccceeec--cCCccCCCCchh
Q 001275 328 PPELGKCKYLTVLHLYANQLEGEIPDELGQLSNLQDLELFDNRLTGEFPVSIWRI---ASLEYLLV--YNNNLLGKLPLE 402 (1109)
Q Consensus 328 p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~l--~~N~l~~~~~~~ 402 (1109)
|+.+.-+++|++||+|+|.|+ ..|.+++++ .|+.|-+.+|.+.. +-..+-.. .-|+||.= -.-.++..-...
T Consensus 268 Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~ 344 (565)
T KOG0472|consen 268 PDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQSEGGT 344 (565)
T ss_pred chHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCCcccc
Confidence 999999999999999999999 678889999 99999999999873 33333221 11222211 000111000000
Q ss_pred hhccCCCCeEEccCCcCcccCCccccCCCCCceEEecCCcccccCCCCcccCcc---ceEEECCCcccccCCCcccCCCC
Q 001275 403 MTELKQLKNISLYNNQFSGVIPQSLGINSSLMQLDFINNSFTGEIPPNLCFGKQ---LRVLNMGQNQFHGPIPSLLGSCP 479 (1109)
Q Consensus 403 ~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~---L~~L~L~~N~l~~~~p~~~~~l~ 479 (1109)
.+..+ ...+.. .......+.+.|+++.-+++ .+|...+...+ ....+++.|++. .+|..+..+.
T Consensus 345 e~~~t----------~~~~~~-~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lk 411 (565)
T KOG0472|consen 345 ETAMT----------LPSESF-PDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELK 411 (565)
T ss_pred cccCC----------CCCCcc-cchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHH
Confidence 00000 000011 11223456677777777777 55655554433 678888888887 6776666665
Q ss_pred ccchh-hccCcccCCCCCC-CCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeec
Q 001275 480 TLWRV-ILKQNQLTGALPE-FSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNI 557 (1109)
Q Consensus 480 ~L~~l-~l~~N~l~~~~~~-~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 557 (1109)
.+... .+++|.++ .+|. ++.+++|..|+|++|-+. .+|.+++.+..|+.||+|.|+|. .+|.++..+..|+.+-.
T Consensus 412 elvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtlla 488 (565)
T KOG0472|consen 412 ELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLA 488 (565)
T ss_pred HHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHh
Confidence 55443 44444444 4444 777777888888777776 67777777777888888888777 56777777777777777
Q ss_pred ccccccccCCccccCCCCccEEEecCccccCCCCcccccccccceecccccccc
Q 001275 558 SLNHVEGSLPSQLSKCKNLEVFDVSFNLLNGSIPSSLRSWKSLSILKLSENHFT 611 (1109)
Q Consensus 558 ~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 611 (1109)
++|++....|+.+.++.+|..|||.+|.+. .+|..+++|++|++|+|++|.|+
T Consensus 489 s~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 489 SNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 777777555555777777777777777777 66777777777777777777776
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-42 Score=384.02 Aligned_cols=258 Identities=27% Similarity=0.364 Sum_probs=211.5
Q ss_pred CCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 821 LNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+...+.||+|.||+||.|.++....||+|.++.. .....+|.+|+++|++++|++||+++|+|..++..|||||||+.
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc--ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 4456779999999999999998889999998543 44456788999999999999999999999998899999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+|++. .....+.....+.++.|||+|++||+ ++++|||||.++||||+++..+||+|||+|+...++ ....
T Consensus 286 GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~-~Y~~ 360 (468)
T KOG0197|consen 286 GSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD-EYTA 360 (468)
T ss_pred CcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCC-ceee
Confidence 999999987 33456889999999999999999999 999999999999999999999999999999955433 3334
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHH
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEE 1059 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1059 (1109)
.....-+..|+|||.+....++.|||||||||++|||+| |+.|+... . ..++...+.. .. +
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-s-n~ev~~~le~---Gy----R--------- 422 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-S-NEEVLELLER---GY----R--------- 422 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-C-HHHHHHHHhc---cC----c---------
Confidence 445566789999999999999999999999999999999 55554322 1 1122222211 10 1
Q ss_pred hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCCCC
Q 001275 1060 MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVPMT 1105 (1109)
Q Consensus 1060 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~ 1105 (1109)
.+....++.++++++..||+.+|++|||++.+...++++.....
T Consensus 423 --lp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~~ 466 (468)
T KOG0197|consen 423 --LPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTSTE 466 (468)
T ss_pred --CCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhccc
Confidence 11123456678889999999999999999999999998855443
No 10
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-42 Score=402.64 Aligned_cols=261 Identities=26% Similarity=0.442 Sum_probs=219.8
Q ss_pred hCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
.+....+.||+|+||+||+|+. ++.+.||||.++.....+..++|++|++++..++|||||+++|+|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 4556678899999999999965 3457799999988777778899999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcE
Q 001275 893 IMYRYMENGSLRDVLHSITP-----------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEP 961 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 961 (1109)
+|+|||..|||.+||+...+ +++++..+.+.||.|||.|++||- +..+|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence 99999999999999976432 234889999999999999999999 8999999999999999999999
Q ss_pred EEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHH
Q 001275 962 HISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRS 1040 (1109)
Q Consensus 962 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 1040 (1109)
||+|||+++.....++........-+++|||||.+..++||.+||||||||++||+++ |+.|+.....+ ++.+.++
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~--EVIe~i~- 719 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQ--EVIECIR- 719 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchH--HHHHHHH-
Confidence 9999999998876665554434567889999999999999999999999999999998 77787654222 1222111
Q ss_pred hhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1041 VWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1041 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
+.. ..+..+.++.+++.|+..||+..|++||+++|+-..|.....
T Consensus 720 ------------~g~-----lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 720 ------------AGQ-----LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred ------------cCC-----cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 111 123345677889999999999999999999999999988743
No 11
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-42 Score=363.52 Aligned_cols=200 Identities=29% Similarity=0.456 Sum_probs=179.4
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
.+|...+.||+|+||+||+|+++ ++.+||||.+.... .++.......|+.+++.++|||||++++++..++..|+|||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 56788888999999999999764 57999999996554 45556678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC------CcEEEecccCCc
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE------MEPHISDFGIAK 970 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~------~~~kl~DfGla~ 970 (1109)
||.||+|.+|++..+ .+++..+..++.|+|.|+++|| +++||||||||.|||++.. -.+||+|||+|+
T Consensus 90 yC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred eCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999999865 4899999999999999999999 9999999999999999764 458999999999
Q ss_pred ccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 971 LLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 971 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
.+...... ...+|++-|||||++...+|+.|+|+||+|+|+|||++|+.||+..
T Consensus 164 ~L~~~~~a---~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 164 FLQPGSMA---ETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hCCchhHH---HHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 98754332 3479999999999999999999999999999999999999999754
No 12
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-41 Score=376.05 Aligned_cols=252 Identities=23% Similarity=0.346 Sum_probs=209.1
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.+|...+.||+|||+.||+++. ..|+.||+|++.++.- ......+.+|+++.++++|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688999999999999999977 8899999999966443 233557889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
|+|+.|+|..+++..+ ++++.++..+..||+.|+.||| +.+|+|||||..|++++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krrk---~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK---PLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhcC---CCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999998533 5999999999999999999999 999999999999999999999999999999988654
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
+. .....+|||.|.|||++.....+..+||||+||++|-++.|++||+.. .+.+...........
T Consensus 172 ~E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-----~vkety~~Ik~~~Y~-------- 236 (592)
T KOG0575|consen 172 GE--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETK-----TVKETYNKIKLNEYS-------- 236 (592)
T ss_pred cc--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccc-----hHHHHHHHHHhcCcc--------
Confidence 32 223479999999999999999999999999999999999999999642 222222222111111
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.+.....+ ..+++..+++.+|.+|||+++|+.|=.-
T Consensus 237 -----~P~~ls~~---A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 237 -----MPSHLSAE---AKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred -----cccccCHH---HHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 11112233 3446669999999999999999987543
No 13
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.4e-42 Score=343.55 Aligned_cols=260 Identities=22% Similarity=0.373 Sum_probs=204.1
Q ss_pred hCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeE-EecCCc-eeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDF-WLRKDC-GIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~-~~~~~~-~~lv 894 (1109)
.+|.+.++||+|.||+|||+ ...+|..+|.|.+.... +.+..++...|+.++++++|||||+++++ +.+... .++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 45777889999999999999 45689999999986443 33445678899999999999999999983 444444 8999
Q ss_pred EEeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEEeccCCCCeeeCCCCcEEEecccCCccc
Q 001275 895 YRYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPP-IVHRDIKPENILLDSEMEPHISDFGIAKLL 972 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 972 (1109)
|||+..|+|...++..+ ....+++..+++++.|++.||.++|+...++ |+||||||.||+++++|.+|++|||+++++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999987643 3456899999999999999999999533332 889999999999999999999999999988
Q ss_pred CCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
... .......+|||.||+||.+.+..|+.|+||||+||++|||+.-++||.+. .+....+..-+. +...+
T Consensus 179 ~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~qg--d~~~~- 248 (375)
T KOG0591|consen 179 SSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIEQG--DYPPL- 248 (375)
T ss_pred cch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHHcC--CCCCC-
Confidence 653 33445689999999999999999999999999999999999999999753 222222221111 00000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.......++..++..|+..||+.||+.-..++.+..
T Consensus 249 -----------p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 249 -----------PDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----------cHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 012234556678889999999999996555555443
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.1e-40 Score=338.67 Aligned_cols=269 Identities=22% Similarity=0.302 Sum_probs=203.8
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccC-hHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRG-SLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+.|+...++|+|+||.|||++.+ +|+.||||++....+... .+-..||++++++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35677788999999999999765 599999999966555333 4557899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|++.. +.+-+.... ..++.+.+.+++.|+++|+.|+| +.+++||||||+|||++.++.+|+||||+|+.+..+.
T Consensus 82 ~~dhT-vL~eLe~~p--~G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 82 YCDHT-VLHELERYP--NGVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred ecchH-HHHHHHhcc--CCCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 99884 444444432 34889999999999999999999 9999999999999999999999999999999886432
Q ss_pred CCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHH----------hhcCc
Q 001275 977 ASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRS----------VWSDT 1045 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~----------~~~~~ 1045 (1109)
. ..+.++.|..|+|||.+.+ .+|+..+||||+||++.||++|.+.|.+. .+-.++..+... .+...
T Consensus 156 d--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~-SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 156 D--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR-SDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred c--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc-chHHHHHHHHHHHcccCHHHHHHhccC
Confidence 2 2334789999999998887 78999999999999999999999776432 222222211111 11111
Q ss_pred cccccccchhhh-HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1046 EEINDIVDLSLM-EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1046 ~~~~~~~d~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
..+..+.-|... .+.....++....-+++++..|++.||.+|++-+|++.|
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 111111111100 111112233344467888999999999999999999865
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-40 Score=345.66 Aligned_cols=250 Identities=24% Similarity=0.344 Sum_probs=202.7
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
.+.|++.++||+|+||+||.++. ++++.||+|++.++... ...+...+|..++.+++||.||+++..|++.+..|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 46799999999999999999955 56899999999665433 3466788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
+||+.||.|..++.+.+ .+++..+.-++.+|+.||.||| +.+||||||||+|||+|++|+++|+|||+++....
T Consensus 104 ld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 99999999999998644 4889999999999999999999 99999999999999999999999999999985433
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc-cccccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT-EEINDIVD 1053 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d 1053 (1109)
... .....+||+.|||||++.+..|+..+|.||+|+++|||++|.+||... +...+.+...... ......
T Consensus 178 ~~~--~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~-----~~~~~~~~I~~~k~~~~p~~-- 248 (357)
T KOG0598|consen 178 DGD--ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE-----DVKKMYDKILKGKLPLPPGY-- 248 (357)
T ss_pred CCC--ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc-----cHHHHHHHHhcCcCCCCCcc--
Confidence 322 223479999999999999999999999999999999999999999653 2223333322221 000010
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC----CHHHHHHH
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP----NMRDVVRQ 1096 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP----s~~evl~~ 1096 (1109)
.. .+..+++.+.++.||++|. ++.++-+|
T Consensus 249 -----------ls---~~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 249 -----------LS---EEARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred -----------CC---HHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 12 2344466689999999995 55665544
No 16
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-41 Score=359.42 Aligned_cols=271 Identities=20% Similarity=0.296 Sum_probs=209.9
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecCC-ceeEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKD-CGIIM 894 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~-~~~lv 894 (1109)
.++|...++||.|.||.||+|+. .++..||||+++.+-.......-.||+..+++++ |||||++.+++.+.+ ..|+|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 46788889999999999999954 5789999999965544433444579999999998 999999999999888 89999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
||||+. +|++.++.. ...+++..+..|+.||++||+|+| ++|+.|||+||+|||+.....+||+|||+||.+..
T Consensus 89 fE~Md~-NLYqLmK~R--~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred HHhhhh-hHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccccccc
Confidence 999975 999999875 456999999999999999999999 99999999999999999999999999999998765
Q ss_pred CCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc-c--
Q 001275 975 SPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN-D-- 1050 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 1050 (1109)
... .+.++.|..|+|||++.. +.|+.+.|+||+|||++|+.+-++.|.+ ..+..++..+........+... +
T Consensus 163 kpP---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG-~sE~Dqi~KIc~VLGtP~~~~~~eg~ 238 (538)
T KOG0661|consen 163 KPP---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPG-ASEIDQIYKICEVLGTPDKDSWPEGY 238 (538)
T ss_pred CCC---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCC-CcHHHHHHHHHHHhCCCccccchhHH
Confidence 433 345789999999997764 5679999999999999999999987743 2333333333222221111100 0
Q ss_pred ----ccc---hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1051 ----IVD---LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1051 ----~~d---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.+. +...+.....-......+.++++.+|+++||.+||||+|+++|--
T Consensus 239 ~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pf 293 (538)
T KOG0661|consen 239 NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPF 293 (538)
T ss_pred HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcc
Confidence 000 000000011112345567888999999999999999999998853
No 17
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6e-41 Score=378.25 Aligned_cols=256 Identities=27% Similarity=0.401 Sum_probs=216.0
Q ss_pred CCCceeecccCeEEEEEEeC----CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 822 NAKHVIGRGAHGIVYKASLG----PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 822 ~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+.++||.|.||.||+|+++ ....||||.++....++...+|..|+.+|.++.||||+++.|+.......++|+||
T Consensus 632 ~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEy 711 (996)
T KOG0196|consen 632 KIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEY 711 (996)
T ss_pred EEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhh
Confidence 55789999999999999774 24579999998888888889999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC-
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP- 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~- 976 (1109)
|++|+|+.||+.+.. .+++.+...+.++||.|+.||. +.++|||||.++|||++.+-.+|++|||+++.+.++.
T Consensus 712 MENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 712 MENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 999999999998663 4999999999999999999999 9999999999999999999999999999999885544
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
...+..+..-+.+|.|||.+..+++|.++|||||||++||.++ |.+||..... +++...+..
T Consensus 787 ~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--QdVIkaIe~--------------- 849 (996)
T KOG0196|consen 787 AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVIKAIEQ--------------- 849 (996)
T ss_pred ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--HHHHHHHHh---------------
Confidence 2223333445679999999999999999999999999999887 8888764322 222221111
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
..-.+...+++..+++|+++||++|-.+||++.|++.+|.+...
T Consensus 850 ---gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 850 ---GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ---ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 11122234677789999999999999999999999999987643
No 18
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=4.1e-39 Score=322.35 Aligned_cols=273 Identities=24% Similarity=0.373 Sum_probs=213.8
Q ss_pred hCCCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecccccC-hHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRGHKRG-SLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
.+|...+++|+|.||.||+|+ ..+|+.||||+++....+.+ .....||++.++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 467778899999999999995 46799999999976654443 3467899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
||+. +|+..++... -.++...+..++.++.+|++|+| .+.|+|||+||.|+|++++|.+||+|||+|+.+....
T Consensus 82 fm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred eccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 9986 9999887643 45888999999999999999999 9999999999999999999999999999999887654
Q ss_pred CCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHh-------hcCcccc
Q 001275 977 ASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSV-------WSDTEEI 1048 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~ 1048 (1109)
..... .+.|..|+|||.+.+ +.|+..+|+||.|||+.||+-|.+-| ++..+-.++...++.. |.+-..+
T Consensus 156 ~~~~~--~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~f-pG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 156 RIQTH--QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFF-PGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred ccccc--ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCC-CCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 44332 378999999998886 46899999999999999999887544 4444444444444433 2222223
Q ss_pred ccccchhhhHHhhh-chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1049 NDIVDLSLMEEMLV-SSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1049 ~~~~d~~~~~~~~~-~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.+.++-...+.... .-...+..+.++++..|+..||.+|+++.|+++|=--.
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~ 285 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFK 285 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhh
Confidence 33222221111111 11234445678888899999999999999999886444
No 19
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-40 Score=361.45 Aligned_cols=368 Identities=22% Similarity=0.203 Sum_probs=298.4
Q ss_pred CCcEeeccCccccCCCCccccccCccceeccccccccccCCcccccccccceecccccccccccccccCCCcccceeecc
Q 001275 120 ALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYVFLNNNSLSGSIPRNVGDLKEVEALWLF 199 (1109)
Q Consensus 120 ~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~ 199 (1109)
.-+.||+|+|+++...+..|.++++|++++|..|.++ .||.......+|+.|+|.+|.|+..-.+.+..++.|+.|||+
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 3456777777777777777777788888888888777 777766666678888888888877777777778888888888
Q ss_pred cccCCCCcccccccccCccEEEeccccccCcCchhcccccccccccccCcccCCcccccccCCCCcchhccccccccCCC
Q 001275 200 SNRLSGTIPESIGNCYRLQELYLNENKLMGFLPESLSNLENLVYLDVGDNNLEGRINFGSEKCKNLTFLDLSYNRFSGGI 279 (1109)
Q Consensus 200 ~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 279 (1109)
.|.|+.+.-.+|..-.++++|+|++|+|+......|.++.+|..|.|+.|+++...+..|..+++|+.|+|.+|+|.-.-
T Consensus 158 rN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive 237 (873)
T KOG4194|consen 158 RNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVE 237 (873)
T ss_pred hchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccceeeeh
Confidence 88888666667777778888888888888877888888888888888888888888888888888888888888887444
Q ss_pred CcccccccCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCCccccccccceeeccCcccCCCCCccccCCC
Q 001275 280 SPNLGNCSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEGEIPDELGQLS 359 (1109)
Q Consensus 280 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 359 (1109)
--.|.++++|+.|.|..|++...-..+|-.+.++++|+|+.|+++..-..++.++++|+.|+||+|.|+..-++.+...+
T Consensus 238 ~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~Wsftq 317 (873)
T KOG4194|consen 238 GLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQ 317 (873)
T ss_pred hhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcc
Confidence 56788888888888888888877778888888888888888888877777888888999999999998888888888888
Q ss_pred CccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcccCCcc---ccCCCCCceE
Q 001275 360 NLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQS---LGINSSLMQL 436 (1109)
Q Consensus 360 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~~~~L~~L 436 (1109)
+|++|+|++|+|+...+.+|..+..|+.|.|++|++...-...|..+++|+.|||++|.++..+.+. |..+++|+.|
T Consensus 318 kL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL 397 (873)
T KOG4194|consen 318 KLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKL 397 (873)
T ss_pred cceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhe
Confidence 8999999999998777788888889999999999988766777888899999999999988777653 5578888889
Q ss_pred EecCCcccccCCCCcccCccceEEECCCcccccCCCcccCCCCccchhhccCc
Q 001275 437 DFINNSFTGEIPPNLCFGKQLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQN 489 (1109)
Q Consensus 437 ~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N 489 (1109)
+|.+|++....-..|..+..|+.|||.+|-|...-|++|..+ .|++|.+..-
T Consensus 398 ~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSs 449 (873)
T KOG4194|consen 398 RLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSS 449 (873)
T ss_pred eecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhccc
Confidence 999998886555677788888999999998888888888877 7777766543
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-39 Score=347.67 Aligned_cols=271 Identities=26% Similarity=0.348 Sum_probs=208.4
Q ss_pred hCCCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecC--CceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 894 (1109)
+.|+..++||+|.||.||+|+ ..+|+.||+|++.....+ .....+.+||.++++++||||+++.+...+. ...|+|
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 456667889999999999995 567999999999776543 4456778999999999999999999998876 688999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
+|||+. +|.-++..- .-.++..++..++.|+++||+|+| +++|+|||||.+|||+|.+|.+||+|||+|+++..
T Consensus 197 FeYMdh-DL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred Eecccc-hhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 999987 888877652 235899999999999999999999 99999999999999999999999999999998865
Q ss_pred CCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
.. ....+..+.|..|+|||.+.+. .|+.++|+||.|||+.||++|++.|.+. .+..++..+++......+......+
T Consensus 271 ~~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~-tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 271 SG-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR-TEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred CC-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc-cHHHHHHHHHHHhCCCChhcccccc
Confidence 43 3335667899999999988874 6899999999999999999999887543 3444444444333222222111111
Q ss_pred hh--------hh-HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1054 LS--------LM-EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1054 ~~--------~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.. .. .....+.........++++..++..||.+|.||.++++.=
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~se 401 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSE 401 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCc
Confidence 00 00 0001111222234556677799999999999999998754
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=337.68 Aligned_cols=264 Identities=25% Similarity=0.364 Sum_probs=211.0
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+.|+..++||.|.-++||+|+. ..+++||||++..+......+.+.+|++.|+.++||||++++..|..+...++||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 5688899999999999999955 568999999998877777788999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
|.+|++.++++..-+ ..+++..+..|.+++++||.||| .+|.+|||||+.|||++.+|.|||+|||.+..+.....
T Consensus 106 Ma~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 999999999987654 34899999999999999999999 99999999999999999999999999999876644332
Q ss_pred C-cee-eecccCcccccccccc--cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc-ccc
Q 001275 978 S-TTS-ISVVGTIGYIAPENAF--TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN-DIV 1052 (1109)
Q Consensus 978 ~-~~~-~~~~gt~~y~aPE~~~--~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1052 (1109)
. ... ...+||+.|||||++. ...|+.|+||||||++..|+.+|..||....... -............. ...
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmk----vLl~tLqn~pp~~~t~~~ 257 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMK----VLLLTLQNDPPTLLTSGL 257 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHH----HHHHHhcCCCCCcccccC
Confidence 1 111 4468999999999854 3568999999999999999999999996543221 11111111111010 011
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
+.+ ........+.+++..|++.||++|||+++++++=.
T Consensus 258 ~~d--------~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~F 295 (516)
T KOG0582|consen 258 DKD--------EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAF 295 (516)
T ss_pred ChH--------HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHH
Confidence 111 11222335666777999999999999999998753
No 22
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-38 Score=344.97 Aligned_cols=258 Identities=28% Similarity=0.428 Sum_probs=201.8
Q ss_pred hCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCC--ceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD--CGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 895 (1109)
.+|...+.||+|+||+||++...+ |+..|||.+....... .+.+++|+.++.+++|||||+++|...... ..+++|
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~m 95 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFM 95 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeee
Confidence 456778899999999999997654 8999999885543222 567899999999999999999999855444 589999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-CCcEEEecccCCcccCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-EMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfGla~~~~~ 974 (1109)
||+++|+|.+++...+. .+++..+.+++.||++||+||| +++||||||||+|||++. ++.+||+|||.++....
T Consensus 96 Ey~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred eccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 99999999999998664 5999999999999999999999 999999999999999999 79999999999987653
Q ss_pred -CCCCceeeecccCcccccccccccCC-CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 975 -SPASTTSISVVGTIGYIAPENAFTTA-KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 975 -~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
...........||+.|||||++.++. ...++||||+||++.||+||+.||... .+...+........ ....+
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~~~-~~P~i- 244 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGRED-SLPEI- 244 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhccC-CCCCC-
Confidence 11222234578999999999999643 346999999999999999999998643 11122221111111 01111
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+.... .+..+++.+|++.||++||||+|+++|....
T Consensus 245 ---------p~~ls---~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~ 280 (313)
T KOG0198|consen 245 ---------PDSLS---DEAKDFLRKCFKRDPEKRPTAEELLEHPFLK 280 (313)
T ss_pred ---------CcccC---HHHHHHHHHHhhcCcccCcCHHHHhhChhhh
Confidence 11112 2344566799999999999999999998664
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-39 Score=349.88 Aligned_cols=258 Identities=24% Similarity=0.369 Sum_probs=208.5
Q ss_pred HHHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCc
Q 001275 815 IEATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 815 ~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 890 (1109)
.+...+|...+.||+|+|++||+|+. .++++||||++.++. .+...+-+.+|-++|.++ .||.|++++..|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 34457899999999999999999954 578999999985443 233455678899999999 89999999999999999
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.|+|+||+++|+|.+++++.+. +++.-...++.+|+.|++||| +.|||||||||+|||+|+|+++||+|||.|+
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccc
Confidence 9999999999999999998764 888888999999999999999 9999999999999999999999999999999
Q ss_pred ccCCCCCC---------cee--eecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHH
Q 001275 971 LLDKSPAS---------TTS--ISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVR 1039 (1109)
Q Consensus 971 ~~~~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~ 1039 (1109)
.+...... ... ..++||..|.+||++.....++.+|+|+||||+|+|+.|++||....+ .. + ++
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-yl-i---Fq 297 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-YL-I---FQ 297 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-HH-H---HH
Confidence 87543211 111 458999999999999999999999999999999999999999975421 11 1 11
Q ss_pred HhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1040 SVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.+++.. ...++..++. ..+|+.+.+..||.+|+++.|+.+|-.-
T Consensus 298 ----------kI~~l~---y~fp~~fp~~---a~dLv~KLLv~dp~~Rlt~~qIk~HpFF 341 (604)
T KOG0592|consen 298 ----------KIQALD---YEFPEGFPED---ARDLIKKLLVRDPSDRLTSQQIKAHPFF 341 (604)
T ss_pred ----------HHHHhc---ccCCCCCCHH---HHHHHHHHHccCccccccHHHHhhCccc
Confidence 111100 1112223333 4445668999999999999999988643
No 24
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-39 Score=350.18 Aligned_cols=265 Identities=25% Similarity=0.349 Sum_probs=218.9
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
....++++||+|.||.|..+....+..||||+++.........+|.+|+++|.+++|||||+++|+|..++..++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 44567889999999999999999899999999987777777789999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.+|+..+..+. ...+...+|+.||+.|++||. +.++||||+.++|+|+++++++||+|||+++-+...++.
T Consensus 618 EnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred hcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 9999999998865433 566677889999999999999 999999999999999999999999999999977666665
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh--CCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT--RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
......+-+.+|||||.+..+++|.++|||+|||++||+++ ...||.... +++.++-...+.......
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt--~e~vven~~~~~~~~~~~-------- 763 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT--DEQVVENAGEFFRDQGRQ-------- 763 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh--HHHHHHhhhhhcCCCCcc--------
Confidence 55455677899999999999999999999999999999886 556765332 122222222222111111
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
......+.+..++++++.+||..|-++||+++++..+|.+.
T Consensus 764 ---~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 764 ---VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ---eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 01112345566788999999999999999999999999875
No 25
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-39 Score=354.04 Aligned_cols=251 Identities=23% Similarity=0.345 Sum_probs=204.3
Q ss_pred hCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
..|...++||+|+.|.||.| +..+++.||||++.... +....-+.+|+.+|+..+|+|||++++.|..+++.++||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~-Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK-QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc-CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 45777788999999999999 45678999999995543 33344578999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
|+||+|.|.+.... +++.++..|..++++||+||| ..+|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 352 m~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred cCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 99999999987654 899999999999999999999 99999999999999999999999999999988765433
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.....+||+.|||||++....|++|+||||+|++++||+-|.+||-.... +........ .. .+++.
T Consensus 425 --KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P----lrAlyLIa~-ng-------~P~lk 490 (550)
T KOG0578|consen 425 --KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRALYLIAT-NG-------TPKLK 490 (550)
T ss_pred --ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh----HHHHHHHhh-cC-------CCCcC
Confidence 33457999999999999999999999999999999999999999853211 111111100 00 01111
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
........+.+++.+|++.||++||+|+|+++|=
T Consensus 491 ------~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 491 ------NPEKLSPELKDFLDRCLVVDVEQRASAKELLEHP 524 (550)
T ss_pred ------CccccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence 0112223455677799999999999999999874
No 26
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-40 Score=357.94 Aligned_cols=390 Identities=22% Similarity=0.195 Sum_probs=262.5
Q ss_pred ceeccccccccccCCcccccc--cccceecccccccccccccccCCCcccceeecccccCCCCcccccccccCccEEEec
Q 001275 146 QYLNLYGNLLDGEIPEPLFRI--LGLQYVFLNNNSLSGSIPRNVGDLKEVEALWLFSNRLSGTIPESIGNCYRLQELYLN 223 (1109)
Q Consensus 146 ~~L~L~~n~l~~~~p~~l~~l--~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~ 223 (1109)
+.||.+++.+....-..+... ..-+.|++++|+++..-+..|.++++|+.+++..|.++ .+|...+...+|+.|+|.
T Consensus 55 ~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~ 133 (873)
T KOG4194|consen 55 RLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLR 133 (873)
T ss_pred eeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeee
Confidence 457777777653211111111 13456888888888888888888888888888888888 677777777778888888
Q ss_pred cccccCcCchhcccccccccccccCcccCCcccccccCCCCcchhccccccccCCCCcccccccCCcEEEeecCCCCCcC
Q 001275 224 ENKLMGFLPESLSNLENLVYLDVGDNNLEGRINFGSEKCKNLTFLDLSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGSI 303 (1109)
Q Consensus 224 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 303 (1109)
+|.|+.+-.+++..++.|+.|||+.|.|+...-..|..-.++++|+|++|+|+......|.++.+|..|.|+.|+++...
T Consensus 134 ~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 134 HNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCcccccC
Confidence 88888888888888888888888888888776666777777888888888888777777777778888888888888777
Q ss_pred CccccccccccEEEcCCCCCCCCCCCccccccccceeeccCcccCCCCCccccCCCCccEEEccCccccccCchHHHhhc
Q 001275 304 PSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEGEIPDELGQLSNLQDLELFDNRLTGEFPVSIWRIA 383 (1109)
Q Consensus 304 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 383 (1109)
+..|..+++|+.|+|..|+|.-.---.|.++++|+.|.|..|.+...-...|..+.++++|+|+.|+++..-..++.+++
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt 293 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLT 293 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccc
Confidence 77777788888888888877633234677777777777777777765556666777777777777777755555666666
Q ss_pred ccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcccCCccccCCCCCceEEecCCcccccCCCCcccCccceEEECC
Q 001275 384 SLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQSLGINSSLMQLDFINNSFTGEIPPNLCFGKQLRVLNMG 463 (1109)
Q Consensus 384 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~L~L~ 463 (1109)
.|+.|+||+|.|...-+..+.-.++|++|+|++|+|+...+.+|..+..|++|+|++|.++..-...|..+++|++|||+
T Consensus 294 ~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr 373 (873)
T KOG4194|consen 294 SLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLR 373 (873)
T ss_pred hhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCc
Confidence 66666666666666556666556666666666666665555556555666666666665554433444444555555555
Q ss_pred CcccccCCCcccCCCCccchhhccCcccCCCCCCCCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcc
Q 001275 464 QNQFHGPIPSLLGSCPTLWRVILKQNQLTGALPEFSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMP 543 (1109)
Q Consensus 464 ~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 543 (1109)
+|.|+..+.+. -..|..++.|+.|++.+|+|..+.-.+|.++.+|+.|||.+|.|...-|
T Consensus 374 ~N~ls~~IEDa--------------------a~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 374 SNELSWCIEDA--------------------AVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred CCeEEEEEecc--------------------hhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecc
Confidence 55554433321 0015556666666666666664444556666666666666666665556
Q ss_pred hhhhcccccceeec
Q 001275 544 QELGNLVSLVTLNI 557 (1109)
Q Consensus 544 ~~~~~l~~L~~L~L 557 (1109)
..|..+ .|++|.+
T Consensus 434 nAFe~m-~Lk~Lv~ 446 (873)
T KOG4194|consen 434 NAFEPM-ELKELVM 446 (873)
T ss_pred cccccc-hhhhhhh
Confidence 666555 5555554
No 27
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4e-38 Score=360.65 Aligned_cols=262 Identities=23% Similarity=0.353 Sum_probs=203.1
Q ss_pred hhCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCC-
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKD- 889 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~- 889 (1109)
.++|++.++||+|+||.||+|.. .+++.||||++...........+.+|+.++.++ +||||++++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 36789999999999999999964 235689999986443344456789999999999 8999999999887644
Q ss_pred ceeEEEEeccCCCHHHHHhccCC---------------------------------------------------------
Q 001275 890 CGIIMYRYMENGSLRDVLHSITP--------------------------------------------------------- 912 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 912 (1109)
..++||||+++|+|.+++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 57899999999999999975321
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCccc
Q 001275 913 --PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGY 990 (1109)
Q Consensus 913 --~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y 990 (1109)
...+++..+.+++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++...............++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 124788899999999999999999 899999999999999999999999999999865433222222234567889
Q ss_pred ccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHH
Q 001275 991 IAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQV 1069 (1109)
Q Consensus 991 ~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 1069 (1109)
+|||++.+..++.++|||||||++|||++ |+.||...... ..... ... ..... .. .....
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-~~~~~---~~~-~~~~~-~~-------------~~~~~ 303 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-EEFCQ---RLK-DGTRM-RA-------------PENAT 303 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHH---HHh-cCCCC-CC-------------CCCCC
Confidence 99999999999999999999999999997 99888643211 11111 110 00000 00 01122
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1070 IDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1070 ~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
.++.+++.+||+.||++||++.|+++.|+++.
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 35677888999999999999999999998763
No 28
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-38 Score=339.99 Aligned_cols=273 Identities=26% Similarity=0.367 Sum_probs=204.9
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhc--CCCCceeeEeeEEecCC----cee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGK--IRHRNLVRLEDFWLRKD----CGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~ 892 (1109)
......+++|+|+||.||||.+. ++.||||++. .+..+.|+.|-++.+. ++|+||++|+++-...+ +++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp----~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP----EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecC----HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 44556788999999999999998 5899999984 3345567777666655 48999999999876665 789
Q ss_pred EEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC------CCCCeEEeccCCCCeeeCCCCcEEEecc
Q 001275 893 IMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYD------CDPPIVHRDIKPENILLDSEMEPHISDF 966 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------~~~~ivH~Dlk~~NIll~~~~~~kl~Df 966 (1109)
+|+||.+.|+|.+|++.+. ++|....+|+..+++||+|||++ .+++|+|||||++||||.+|+++.|+||
T Consensus 285 LVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF 360 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF 360 (534)
T ss_pred EEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence 9999999999999998754 89999999999999999999964 3788999999999999999999999999
Q ss_pred cCCcccCCCCCCceeeecccCcccccccccccCCC------CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHH
Q 001275 967 GIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAK------SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRS 1040 (1109)
Q Consensus 967 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~------~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~ 1040 (1109)
|+|..+..........+.+||.+|||||++.+.-- -.+.||||+|.|+|||+++...+++..... ..-.+..
T Consensus 361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~--Yqlpfe~ 438 (534)
T KOG3653|consen 361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPE--YQLPFEA 438 (534)
T ss_pred ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCc--ccCchhH
Confidence 99999887666666667899999999998875422 247899999999999999887765421111 1111111
Q ss_pred hhcCcccc---ccccchhhhHHhhhchh--HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1041 VWSDTEEI---NDIVDLSLMEEMLVSSI--RDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1041 ~~~~~~~~---~~~~d~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
.......+ .+.+-.+..+...++.. ...+.-+.+.+..||..||+.|.|+.=|-+.+++...
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~ 505 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMM 505 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence 11111111 11111111111111111 1334557778889999999999999988888877643
No 29
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-38 Score=350.60 Aligned_cols=267 Identities=24% Similarity=0.337 Sum_probs=207.0
Q ss_pred HHHHHHhhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCc
Q 001275 812 KQVIEATENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 812 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 890 (1109)
++.....+.+...+.||+|.||+||+|.+.+ .||||++..... .+..+.|+.|+..+++-+|.||+=|.|||.....
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~ 462 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL 462 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce
Confidence 3444445566778899999999999999873 479999965543 3345689999999999999999999999987766
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.+|+.+|+|-+|+.++|..+ ..++....+.||.|||+|+.||| .++|||||||..||++.++++|||+|||++.
T Consensus 463 -AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLat 536 (678)
T KOG0193|consen 463 -AIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLAT 536 (678)
T ss_pred -eeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEeccccee
Confidence 99999999999999999754 45889999999999999999999 9999999999999999999999999999987
Q ss_pred ccCCCCCCceeeecccCcccccccccccC---CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc
Q 001275 971 LLDKSPASTTSISVVGTIGYIAPENAFTT---AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 971 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
.-..-..........|...|||||++... +|++.+||||||+++|||+||..||.....+. + .|...+-
T Consensus 537 vk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq--I------ifmVGrG 608 (678)
T KOG0193|consen 537 VKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ--I------IFMVGRG 608 (678)
T ss_pred eeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh--e------EEEeccc
Confidence 54322111122224678899999998743 57999999999999999999999997321111 0 1111100
Q ss_pred cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1048 INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
..-++. ......+..++.+|+..||..++++||.+.+++..|+....
T Consensus 609 ---~l~pd~-----s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 609 ---YLMPDL-----SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ---ccCccc-----hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 000010 11123455577778889999999999999999998887643
No 30
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-38 Score=376.83 Aligned_cols=261 Identities=26% Similarity=0.384 Sum_probs=213.0
Q ss_pred hCCCCCceeecccCeEEEEEEeCC--Cc----EEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP--NA----VFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
.+....+.||+|+||.||+|...+ +. .||||.+....+.+...+|.+|..+|+.++|||||+++|+|.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 345566789999999999996642 33 489999977777788889999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCC----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccC
Q 001275 893 IMYRYMENGSLRDVLHSITP----PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGI 968 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 968 (1109)
+++|||++|+|..|++..+. ...++....+.++.+||+|+.||+ ++++|||||.++|+|+++...|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccch
Confidence 99999999999999988643 346899999999999999999999 99999999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEI 1048 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1109)
|+.+.+.++........-+.+|||||.+..+.++.|+|||||||++||++|...+.++..... ++...+.. ..
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~-~v~~~~~~----gg-- 921 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF-EVLLDVLE----GG-- 921 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH-HHHHHHHh----CC--
Confidence 996655555444333456679999999999999999999999999999999554433432221 11111110 00
Q ss_pred ccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1049 NDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1049 ~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
-.+....+...+++++..||+.+|++||++.++++.+..+.
T Consensus 922 ------------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 922 ------------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred ------------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence 11123455667889999999999999999999999887763
No 31
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-40 Score=376.60 Aligned_cols=487 Identities=27% Similarity=0.306 Sum_probs=290.7
Q ss_pred CCccEeecCCCcccccCCCCCCCCCCCcEeeccCccccCCCCccccccCccceeccccccccccCCcccccccccceecc
Q 001275 95 SKLQTIDLSSNNFSGNIPPKLGNCSALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYVFL 174 (1109)
Q Consensus 95 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 174 (1109)
..++.|+++.|-+-...-+.+.+.-.|+.||+++|++. ..|..+..+.+|+.|+++.|.+. ..|.+..++.+|++|.|
T Consensus 21 ~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL 98 (1081)
T KOG0618|consen 21 EALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNL 98 (1081)
T ss_pred HHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhhee
Confidence 34555555555544221222333333555555555554 45555555555555555555555 44555555555555555
Q ss_pred cccccccccccccCCCcccceeecccccCCCCcccccccccCccEEEeccccccCcCchhcccccccccccccCcccCCc
Q 001275 175 NNNSLSGSIPRNVGDLKEVEALWLFSNRLSGTIPESIGNCYRLQELYLNENKLMGFLPESLSNLENLVYLDVGDNNLEGR 254 (1109)
Q Consensus 175 s~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 254 (1109)
.+|++. ..|..+..+++|+.|+++.|++. .+|.-+..++.++.+..++|..... ++...
T Consensus 99 ~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~--------------- 157 (1081)
T KOG0618|consen 99 KNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQR----LGQTS--------------- 157 (1081)
T ss_pred ccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhh----hcccc---------------
Confidence 555554 44444555555555555555544 4444444444444444444411111 11111
Q ss_pred ccccccCCCCcchhccccccccCCCCcccccccCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCCccccc
Q 001275 255 INFGSEKCKNLTFLDLSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPPELGKC 334 (1109)
Q Consensus 255 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l 334 (1109)
++.++|..|.+.+.++..+..+.. .|+|.+|.+. -..+..+.+|+.|....|++... --.-
T Consensus 158 ----------ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l----~~~g 218 (1081)
T KOG0618|consen 158 ----------IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSEL----EISG 218 (1081)
T ss_pred ----------chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceE----EecC
Confidence 444555555555444444444433 4555555544 11233445555555555555421 1122
Q ss_pred cccceeeccCcccCCCCCccccCCCCccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEc
Q 001275 335 KYLTVLHLYANQLEGEIPDELGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISL 414 (1109)
Q Consensus 335 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 414 (1109)
++|+.|+.++|.+....+. ..-.+|+++++++|+++ .+|.++..+.+|+.+...+|+++ .+|..+..+++|+.|++
T Consensus 219 ~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~ 294 (1081)
T KOG0618|consen 219 PSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSA 294 (1081)
T ss_pred cchheeeeccCcceeeccc--cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHh
Confidence 4555555555555522111 12235566666666665 34556666666666666666663 55555555666666666
Q ss_pred cCCcCcccCCccccCCCCCceEEecCCcccccCCCCc-ccCc-cceEEECCCcccccCCCcccCCCCccchhhccCcccC
Q 001275 415 YNNQFSGVIPQSLGINSSLMQLDFINNSFTGEIPPNL-CFGK-QLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQNQLT 492 (1109)
Q Consensus 415 ~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~-~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~ 492 (1109)
..|.+. .+|+.....++|++|||..|+|. ..|+.+ .-.. .|+.|+.+.|++....--.=...+.|+.|++.+|.|+
T Consensus 295 ~~nel~-yip~~le~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Lt 372 (1081)
T KOG0618|consen 295 AYNELE-YIPPFLEGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLT 372 (1081)
T ss_pred hhhhhh-hCCCcccccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCccc
Confidence 666665 45555555666666666666665 333322 2222 2566666666665322222234678999999999999
Q ss_pred CC-CCCCCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCcccc
Q 001275 493 GA-LPEFSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLS 571 (1109)
Q Consensus 493 ~~-~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 571 (1109)
.. +|.+.....|+.|+|++|+|.......+.++..|+.|+||+|+++ .+|..+.+++.|++|...+|+|. ..| ++.
T Consensus 373 d~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~ 449 (1081)
T KOG0618|consen 373 DSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELA 449 (1081)
T ss_pred ccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhh
Confidence 75 577999999999999999998555567889999999999999999 67899999999999999999999 788 899
Q ss_pred CCCCccEEEecCccccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccC
Q 001275 572 KCKNLEVFDVSFNLLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGN 632 (1109)
Q Consensus 572 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N 632 (1109)
.++.|+++|+|.|+|+...-..-.-+++|++|||++|.-.-..-..+..++.+...++.-|
T Consensus 450 ~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 450 QLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred hcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcccccchhhhHHhhhhhheecccC
Confidence 9999999999999998433333333489999999999854344555666666666666555
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-37 Score=345.84 Aligned_cols=256 Identities=25% Similarity=0.328 Sum_probs=206.2
Q ss_pred HhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc---c-cChHHHHHHHHHHhcCC-CCceeeEeeEEecCCc
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH---K-RGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 890 (1109)
...+|...+.||+|+||+||.|.. .+++.||+|.+..... . .....+.+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 346788999999999999999954 5689999996644311 1 23456779999999998 9999999999999999
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC-CcEEEecccCC
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE-MEPHISDFGIA 969 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfGla 969 (1109)
.++||||+.+|+|.+++...+ .+.+.++.+++.|++.|++|+| +.+|+||||||+||+++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999998733 3888999999999999999999 9999999999999999999 99999999999
Q ss_pred cccCCCCCCceeeecccCcccccccccccCC-C-CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAFTTA-K-SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~-~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
.... .........+||+.|+|||++.+.. | +.++||||+||++|.|++|+.||+.. ......+......-.
T Consensus 169 ~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~-----~~~~l~~ki~~~~~~ 241 (370)
T KOG0583|consen 169 AISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDS-----NVPNLYRKIRKGEFK 241 (370)
T ss_pred cccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCc-----cHHHHHHHHhcCCcc
Confidence 9774 1222334479999999999999987 8 58999999999999999999999752 222222222222111
Q ss_pred cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1048 INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+...++ ..++..++.+|++.||.+|+++.|++++=+--
T Consensus 242 ~p~~~~---------------S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~ 279 (370)
T KOG0583|consen 242 IPSYLL---------------SPEARSLIEKMLVPDPSTRITLLEILEHPWFQ 279 (370)
T ss_pred CCCCcC---------------CHHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence 212110 23456678899999999999999999765543
No 33
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.6e-37 Score=344.45 Aligned_cols=250 Identities=27% Similarity=0.367 Sum_probs=208.2
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
-|+..+.||+|+-|.|..|++ .+|+.+|||.+.... .......+++|+-+|+-+.||||++++++|+...+.|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 467788999999999999965 679999999996542 23335678999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|-|++++...++ +.+.++.+++.||+.|+.|+| ..+|+|||+||+|+|+|..+.+||+|||+|..-..+.
T Consensus 93 yv~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred ecCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 9999999999987654 889999999999999999999 8999999999999999999999999999998655443
Q ss_pred CCceeeecccCcccccccccccCCC-CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAK-SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.- ...+|++.|.|||++.+.+| +.++||||+|||+|.++||+.||+.. .+..++..+....-.+..
T Consensus 167 lL---eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlKV~~G~f~MPs----- 233 (786)
T KOG0588|consen 167 LL---ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLKVQRGVFEMPS----- 233 (786)
T ss_pred cc---cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHHHHcCcccCCC-----
Confidence 32 23589999999999999999 78999999999999999999999732 233333333322222211
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
....+..+++.+|+..||++|.|++||++|-+-
T Consensus 234 -----------~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 234 -----------NISSEAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred -----------cCCHHHHHHHHHHhccCccccccHHHHhhCchh
Confidence 112334557779999999999999999999764
No 34
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=9e-40 Score=376.27 Aligned_cols=481 Identities=28% Similarity=0.356 Sum_probs=228.4
Q ss_pred ecccccccccccccccCCCcccceeecccccCCCCcccccccccCccEEEeccccccCcCchhcccccccccccccCccc
Q 001275 172 VFLNNNSLSGSIPRNVGDLKEVEALWLFSNRLSGTIPESIGNCYRLQELYLNENKLMGFLPESLSNLENLVYLDVGDNNL 251 (1109)
Q Consensus 172 L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 251 (1109)
+|++..++. .+|..+-.-..+..|++..|-+-...-+.+.+.-+|+.|++++|++. ..|..+..+.+|+.|+++.|-|
T Consensus 3 vd~s~~~l~-~ip~~i~~~~~~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i 80 (1081)
T KOG0618|consen 3 VDASDEQLE-LIPEQILNNEALQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYI 80 (1081)
T ss_pred cccccccCc-ccchhhccHHHHHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhH
Confidence 455555555 44444433333555666665554222222233333555555555554 2344455555555555555554
Q ss_pred CCcccccccCCCCcchhccccccccCCCCcccccccCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCCcc
Q 001275 252 EGRINFGSEKCKNLTFLDLSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPPEL 331 (1109)
Q Consensus 252 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 331 (1109)
. ..|.+..++.+|++|.|.+|.+. ..|..+..+++|+.|++|+|++. .+|..+
T Consensus 81 ~-------------------------~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i 133 (1081)
T KOG0618|consen 81 R-------------------------SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVI 133 (1081)
T ss_pred h-------------------------hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhH
Confidence 4 23344444444444444444444 34444555555555555555544 444444
Q ss_pred ccccccceeeccCcccCCCCCccccCCCCccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCe
Q 001275 332 GKCKYLTVLHLYANQLEGEIPDELGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKN 411 (1109)
Q Consensus 332 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 411 (1109)
..++.++.+..++|.... .++... ++.++|..|.+.+.++..+..++. .|+|++|.+. ...+..+.+|+.
T Consensus 134 ~~lt~~~~~~~s~N~~~~----~lg~~~-ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~ 203 (1081)
T KOG0618|consen 134 EVLTAEEELAASNNEKIQ----RLGQTS-IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEV 203 (1081)
T ss_pred HhhhHHHHHhhhcchhhh----hhcccc-chhhhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhh
Confidence 455555555555551111 112211 444555555554444444444443 4555555443 122344444555
Q ss_pred EEccCCcCcccCCccccCCCCCceEEecCCcccccCCCCcccCccceEEECCCcccccCCCcccCCCCccchhhccCccc
Q 001275 412 ISLYNNQFSGVIPQSLGINSSLMQLDFINNSFTGEIPPNLCFGKQLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQNQL 491 (1109)
Q Consensus 412 L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l 491 (1109)
|....|+++... -..++|+.|+.++|.++...+ -....+|+.+++++|+++ .+|+|++.|.+|+.+...+|+|
T Consensus 204 l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~--~p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l 276 (1081)
T KOG0618|consen 204 LHCERNQLSELE----ISGPSLTALYADHNPLTTLDV--HPVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRL 276 (1081)
T ss_pred hhhhhcccceEE----ecCcchheeeeccCcceeecc--ccccccceeeecchhhhh-cchHHHHhcccceEecccchhH
Confidence 555555444211 123445555555555541111 112234555555555554 2335555555555555555555
Q ss_pred CCCCCCCCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccc-cceeecccccccccCCc-c
Q 001275 492 TGALPEFSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVS-LVTLNISLNHVEGSLPS-Q 569 (1109)
Q Consensus 492 ~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~-~ 569 (1109)
+..+..+....+|+.|++.+|.+. -+|.....++.|+.|||..|+|....+..+.-+.. |..|+.+.|.++ ..|. .
T Consensus 277 ~~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~ 354 (1081)
T KOG0618|consen 277 VALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYE 354 (1081)
T ss_pred HhhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-cccccc
Confidence 433333445555555555555554 44555555555555555555555332222222222 555555555555 2221 1
Q ss_pred ccCCCCccEEEecCccccCCCCcccccccccceeccccccccCCCcc-hhhhhhhhhhhhcccCcCCCCCCCCchhhhhh
Q 001275 570 LSKCKNLEVFDVSFNLLNGSIPSSLRSWKSLSILKLSENHFTGGIPT-FISELEKLLELQLGGNQLGGEIPPSIGALQDL 648 (1109)
Q Consensus 570 l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l 648 (1109)
=...+.|+.|++.+|.++...-..+.++++|++|+|++|++. ++|+ .+.++..|++|+||+|+|+ .+|..+..+..|
T Consensus 355 e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L 432 (1081)
T KOG0618|consen 355 ENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRL 432 (1081)
T ss_pred chhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhh
Confidence 112345555555555555544444555555555555555555 3333 3455555555555555555 555555555555
Q ss_pred hhhhcccccccccccCcchhhcccCCeEEccCCcccc-cCCCCCccccceEEeeeccc
Q 001275 649 SYALNLSKNGLTGRIPSDLEKLSKLEQLDISSNNLTG-TLSPLSNIHSLVEVNVSYNL 705 (1109)
Q Consensus 649 ~~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g-~~~~l~~~~~l~~l~~~~n~ 705 (1109)
.+|...+|+|. ..| ++.++++|+.+|||.|+|+- ++|....-+.|+.||+++|.
T Consensus 433 -~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 433 -HTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred -HHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 34555555555 455 55555555555555555542 23332222455555555554
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8.3e-37 Score=344.33 Aligned_cols=265 Identities=22% Similarity=0.327 Sum_probs=201.9
Q ss_pred hCCCCCceeecccCeEEEEEEeCC-----------------CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP-----------------NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRL 881 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 881 (1109)
++|...++||+|+||.||+|.+.+ +..||+|.+..........++.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 568889999999999999997532 346999988654444445679999999999999999999
Q ss_pred eeEEecCCceeEEEEeccCCCHHHHHhccC----------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEE
Q 001275 882 EDFWLRKDCGIIMYRYMENGSLRDVLHSIT----------------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVH 945 (1109)
Q Consensus 882 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 945 (1109)
++++...+..++||||+++|+|.+++.... ....+++..+.+++.|++.|++||| +.+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 999999999999999999999999986532 1134788899999999999999999 889999
Q ss_pred eccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhC--CCC
Q 001275 946 RDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITR--KKA 1023 (1109)
Q Consensus 946 ~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg--~~p 1023 (1109)
|||||+||++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+++ ..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999866443322222234567899999999988999999999999999999974 455
Q ss_pred CCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1024 LDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1024 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
|.... ..+....+.............. ........+.+++.+||+.||++||++.|+.+.|++
T Consensus 242 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELT--DEQVIENAGEFFRDQGRQVYLF-----------RPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCC--HHHHHHHHHHHhhhcccccccc-----------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 54321 1112222211111100000000 001123456778889999999999999999998864
No 36
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=330.79 Aligned_cols=265 Identities=25% Similarity=0.306 Sum_probs=198.3
Q ss_pred hhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHH--HHHHhcCCCCceeeEeeEEecCC----ce
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKRE--IQTIGKIRHRNLVRLEDFWLRKD----CG 891 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E--~~~l~~l~h~niv~l~~~~~~~~----~~ 891 (1109)
.++....+.||+|.||.||+|++. |+.||||++.. .+ ++.+.+| +..-..++|+||..|++.-..+. ..
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s--rd--E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS--RD--ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecc--cc--hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 366778899999999999999998 88999999832 22 3334444 44445569999999999855443 46
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhc-----CCCCCeEEeccCCCCeeeCCCCcEEEecc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHY-----DCDPPIVHRDIKPENILLDSEMEPHISDF 966 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-----~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 966 (1109)
++|++|.+.|||+||+... +++.+..++++..+|.||+|||. ..++.|+|||||++||||..++.+.|+|+
T Consensus 285 wLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 8999999999999999874 49999999999999999999995 35888999999999999999999999999
Q ss_pred cCCcccCCCCC--CceeeecccCcccccccccccCCC------CccCcchhhHHHHHHHHhCC----------CCCCCCc
Q 001275 967 GIAKLLDKSPA--STTSISVVGTIGYIAPENAFTTAK------SKESDVYSYGVVLLELITRK----------KALDPSY 1028 (1109)
Q Consensus 967 Gla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~------~~~sDvwSlGvil~elltg~----------~p~~~~~ 1028 (1109)
|+|........ .......+||.+|||||++...-- -..+||||||.|+||+..+. .||++.-
T Consensus 361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~V 440 (513)
T KOG2052|consen 361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVV 440 (513)
T ss_pred eeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCC
Confidence 99987755422 223345799999999998864321 34799999999999998643 3443322
Q ss_pred cccccHHHHHHHhhcCccccccccchhhhHHhhhc-hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1029 KERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS-SIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
+.++...+. .+.+-..++.+..... ...+.+..+.+++..||..+|..|-|+-.+-+.|.+..
T Consensus 441 p~DPs~eeM----------rkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 441 PSDPSFEEM----------RKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CCCCCHHHH----------hcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 222211111 1111112222211111 12356788999999999999999999999999998875
No 37
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=339.04 Aligned_cols=249 Identities=25% Similarity=0.369 Sum_probs=208.1
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
++|.+.+.||+|.||.||||+.+ +.+.||+|.+.+.. .++..+.+.+|++++++++|||||.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 46778889999999999999654 67899999985443 33456678999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+.| +|..++...+ .++++.+..++.+++.||.||| +.+|.|||+||.||+++..+.+|++|||+|+.+...
T Consensus 82 ~a~g-~L~~il~~d~---~lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~- 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDG---KLPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN- 153 (808)
T ss_pred hhhh-hHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccC-
Confidence 9987 9999998654 4899999999999999999999 999999999999999999999999999999977543
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
........|||-|||||...+++|+..+|.||+||++||+++|++||... .+...++....+....
T Consensus 154 -t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d~v~~-------- 219 (808)
T KOG0597|consen 154 -TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKDPVKP-------- 219 (808)
T ss_pred -ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcCCCCC--------
Confidence 33445678999999999999999999999999999999999999999632 3344444433221111
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.......+..++...+.+||..|.+-.+++.|-
T Consensus 220 --------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~Hp 252 (808)
T KOG0597|consen 220 --------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHP 252 (808)
T ss_pred --------cccccHHHHHHHHHHhhcChhhcccHHHHhcCh
Confidence 113334566677789999999999999988774
No 38
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=350.74 Aligned_cols=258 Identities=23% Similarity=0.323 Sum_probs=203.7
Q ss_pred CCCCCceeecccCeEEEEEEeCC--C---cEEEEEEeee--cccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 820 NLNAKHVIGRGAHGIVYKASLGP--N---AVFAVKKLAF--RGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~~--~---~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
+....++||+|+||.||+|++.. + ..||||.... ........+|.+|+++|++++|||||+++|++....+.+
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence 34455889999999999996643 2 2389998753 234556778999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCccc
Q 001275 893 IMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLL 972 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 972 (1109)
+|||+|.||+|.+|++.... .++..++.+++.++|+||+||| +++++||||.++|+|++.++.+||+|||+++.-
T Consensus 238 ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 99999999999999998653 5899999999999999999999 999999999999999999999999999998854
Q ss_pred CCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHH-HHhhcCcccccc
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWV-RSVWSDTEEIND 1050 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 1050 (1109)
.. .........-+.+|+|||.+..+.|++++|||||||++||+++ |..||.+... .++..++ ...+..
T Consensus 313 ~~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~--~~v~~kI~~~~~r~------ 382 (474)
T KOG0194|consen 313 SQ--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN--YEVKAKIVKNGYRM------ 382 (474)
T ss_pred cc--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH--HHHHHHHHhcCccC------
Confidence 31 1111112246789999999999999999999999999999999 7777754321 1222222 111100
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCCC
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVPM 1104 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1104 (1109)
........++..++..||..+|++||+|.++.+.++.+....
T Consensus 383 ------------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~ 424 (474)
T KOG0194|consen 383 ------------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKK 424 (474)
T ss_pred ------------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcc
Confidence 001122344555667999999999999999999998875543
No 39
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-38 Score=340.83 Aligned_cols=242 Identities=29% Similarity=0.449 Sum_probs=200.4
Q ss_pred CCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCC
Q 001275 823 AKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGS 902 (1109)
Q Consensus 823 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 902 (1109)
..+-+|+|+.|.||.|+.. ++.||||++.. --+.+|+-+++++|+||+.|.|+|.....+|+|||||..|-
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~e--------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRE--------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhh--------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 3566999999999999998 77889998732 12357888999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceee
Q 001275 903 LRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSI 982 (1109)
Q Consensus 903 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 982 (1109)
|++.++..+ +++......+..+||.|+.||| ...|||||||+-||||+.+..|||+|||.++...+. .+..
T Consensus 199 L~~VLka~~---~itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~---STkM 269 (904)
T KOG4721|consen 199 LYEVLKAGR---PITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK---STKM 269 (904)
T ss_pred HHHHHhccC---ccCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhh---hhhh
Confidence 999998744 4888899999999999999999 899999999999999999999999999999977543 3444
Q ss_pred ecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhh
Q 001275 983 SVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLV 1062 (1109)
Q Consensus 983 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 1062 (1109)
.+.||..|||||++...+.++|+||||||||+|||+||..||..-... ...|.-....-. .
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss--------AIIwGVGsNsL~-----------L 330 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS--------AIIWGVGSNSLH-----------L 330 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh--------eeEEeccCCccc-----------c
Confidence 679999999999999999999999999999999999999998542111 111221111111 1
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1063 SSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1063 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
.....+...+.-++..||+..|..||++++++.||.-+.
T Consensus 331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 112344556677888999999999999999999998664
No 40
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-38 Score=335.99 Aligned_cols=251 Identities=25% Similarity=0.334 Sum_probs=207.8
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
..|+..+.||+|.||.||+|.. ..++.||+|++.....+....++++|+.++.+++++||.++++.+..+...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4567778899999999999955 568999999998888888888999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
|.||++.+.++... .+.+..+.-|+.++..|+.|+| ..+.+|||||+.||++.++|.+|++|||++..+.....
T Consensus 93 ~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~ 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK 166 (467)
T ss_pred hcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhh
Confidence 99999999997643 3477778889999999999999 89999999999999999999999999999988765433
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.. ..++||+.|||||++....|+.|+||||+|++.+||.+|.+|+........ +. .+..-..|.+.
T Consensus 167 rr--~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-lf-----------lIpk~~PP~L~ 232 (467)
T KOG0201|consen 167 RR--KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-LF-----------LIPKSAPPRLD 232 (467)
T ss_pred cc--ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-EE-----------eccCCCCCccc
Confidence 32 457999999999999999999999999999999999999999865432110 00 00011111111
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
. .....+.+++..|++.+|+.||+|+++++|=
T Consensus 233 ~--------~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~ 264 (467)
T KOG0201|consen 233 G--------DFSPPFKEFVEACLDKNPEFRPSAKELLKHK 264 (467)
T ss_pred c--------ccCHHHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence 1 2223355567799999999999999999874
No 41
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-37 Score=323.13 Aligned_cols=250 Identities=24% Similarity=0.320 Sum_probs=209.8
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.+|++.+.||+|.||.|-+|.. ..|+.||||.+.+...+ .+.-.+.+|+++|..++||||+.++++|...+...+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 5677778899999999999954 78999999999665433 33446889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||..+|.|+||+...+. +++.++..++.||..|+.|+| +.++||||||.+|||+|.++.+||+|||++-.+...
T Consensus 133 EYaS~GeLYDYiSer~~---LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 133 EYASGGELYDYISERGS---LSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EecCCccHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 99999999999987654 999999999999999999999 999999999999999999999999999999877654
Q ss_pred CCCceeeecccCcccccccccccCCC-CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAK-SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.. .+.++|++-|.+||++.+.+| ++.+|-||+||++|-++.|..||++. +....+++.-...
T Consensus 207 kf---LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-----Dhk~lvrQIs~Ga--------- 269 (668)
T KOG0611|consen 207 KF---LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-----DHKRLVRQISRGA--------- 269 (668)
T ss_pred cH---HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-----hHHHHHHHhhccc---------
Confidence 33 345799999999999999999 78999999999999999999999753 3333443332111
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. .++...+..-+++||+..+|++|.|+.|+..|-+-
T Consensus 270 -Yr-------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 270 -YR-------EPETPSDASGLIRWMLMVNPERRATIEDIASHWWV 306 (668)
T ss_pred -cc-------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence 01 11222334457889999999999999999998763
No 42
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-37 Score=349.78 Aligned_cols=254 Identities=26% Similarity=0.363 Sum_probs=212.8
Q ss_pred CCCCceeecccCeEEEEEEeC-CC----cEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PN----AVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.+..++||+|+||+||+|.+- .| -+||+|++......+...++.+|+.+|.+++|||+++++|+|.... ..+|+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 455788999999999999662 23 4689999977777778889999999999999999999999998765 88999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
+||+.|+|.||++..+. .+..+..+.+..|||+|+.||| +++.|||||.++||||.+...+||+|||+|+.....
T Consensus 777 q~mP~G~LlDyvr~hr~--~igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRD--NIGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HhcccchHHHHHHHhhc--cccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 99999999999998553 5888899999999999999999 999999999999999999999999999999988766
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
+.........-.+.|||-|.+..+.|+.++|||||||++||++| |..|++....+ ++.+. ....+
T Consensus 852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--eI~dl----le~ge-------- 917 (1177)
T KOG1025|consen 852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--EIPDL----LEKGE-------- 917 (1177)
T ss_pred cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--HhhHH----Hhccc--------
Confidence 65555555566789999999999999999999999999999998 88887653211 11111 11111
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
. .+..+.+..+++.++.+||..|++.||+++++...+.+.
T Consensus 918 -----R-LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 918 -----R-LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred -----c-CCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 0 122345677899999999999999999999999999886
No 43
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.5e-36 Score=351.35 Aligned_cols=260 Identities=21% Similarity=0.333 Sum_probs=203.3
Q ss_pred hCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 891 (1109)
++|+..++||+|+||+||+|+. +++..||||++...........+.+|++++..+ +||||++++++|...+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4688899999999999999963 345689999986444444456788999999999 899999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCC-----------------------------------------------------------
Q 001275 892 IIMYRYMENGSLRDVLHSITP----------------------------------------------------------- 912 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 912 (1109)
++||||+++|+|.++++....
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 999999999999999865321
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 913 -------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 913 -------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
...+++..+.+++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 124788999999999999999999 8999999999999999999999999999998664432222
Q ss_pred eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 980 TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
......++..|+|||++.+..++.++|||||||++|||++ |..||...... ......+..... ...+
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~-------~~~~---- 339 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYR-------MLSP---- 339 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCcc-------CCCC----
Confidence 2222345678999999999999999999999999999998 77787543211 111111111000 0000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.....++.+++.+||+.||++||+++|+++.|++.
T Consensus 340 -------~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 340 -------ECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -------CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 01123567788899999999999999999999863
No 44
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=308.36 Aligned_cols=198 Identities=25% Similarity=0.342 Sum_probs=177.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|+..+.||.|+||.|..++.+ +|..+|+|++.+... .+..+...+|..+++.+.||.++++++.|.+.+..|+||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 46788899999999999999765 588999999854331 223456778999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||++||.|..++++.+. +++..+..+|.||+.|++||| +.+|++||+||+|||+|.+|.+||+|||+|+.+...
T Consensus 124 eyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 99999999999998764 899999999999999999999 999999999999999999999999999999977432
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
....+|||.|+|||++..+.|..++|.|||||++|||+.|..||...
T Consensus 198 -----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 198 -----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred -----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 33479999999999999999999999999999999999999999754
No 45
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=313.69 Aligned_cols=274 Identities=24% Similarity=0.313 Sum_probs=207.1
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccC-hHHHHHHHHHHhcCCCCceeeEeeEEec--CCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRG-SLSMKREIQTIGKIRHRNLVRLEDFWLR--KDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv 894 (1109)
++|...+.|++|.||.||+|+. ++++.||+|+++....+.+ ...-.+|+.++.+++|||||.+-++... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 5677889999999999999965 5689999999976554433 3356799999999999999999887654 4578999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
||||+. +|...++... ..+...++..+..|+++|++||| +..|+|||||++|+|++..|.+||+|||+|+.+..
T Consensus 156 Me~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred HHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 999987 9999998755 45888999999999999999999 89999999999999999999999999999998876
Q ss_pred CCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc-ccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN-DIV 1052 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 1052 (1109)
+. ...+..+.|..|+|||.+.+. .|+.+.|+||+|||+.||+++++.|.+ ..+..++..+++......+.+. .+.
T Consensus 230 p~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G-~sE~dQl~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 230 PL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG-KSEIDQLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred Cc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC-CchHHHHHHHHHHhCCCccccCCCcc
Confidence 53 334567899999999988865 589999999999999999999987743 3333344444433322211111 111
Q ss_pred chhhh---------HHhhhchhHHH--HHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1053 DLSLM---------EEMLVSSIRDQ--VIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1053 d~~~~---------~~~~~~~~~~~--~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
..... ........... ...-.+++...+..||++|.||+|.++|=.-..
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred ccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 10000 00001111111 133455667899999999999999999865544
No 46
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.7e-38 Score=347.99 Aligned_cols=363 Identities=27% Similarity=0.396 Sum_probs=187.1
Q ss_pred ccccEEEcCCCCCC-CCCCCccccccccceeeccCcccCCCCCccccCCCCccEEEccCccccccCchHHHhhcccceee
Q 001275 311 ARLSSLDLSENQLS-GKIPPELGKCKYLTVLHLYANQLEGEIPDELGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLL 389 (1109)
Q Consensus 311 ~~L~~L~Ls~N~l~-~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 389 (1109)
+-.+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.+.+|++|.+++|++. .+-..+..++.|+.++
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 34445555555555 344555555555555555555554 45555555555555555555544 2333344444444444
Q ss_pred ccCCccCCCCchhhhccCCCCeEEccCCcCcccCCccccCCCCCceEEecCCcccccCCCCcccCccceEEECCCccccc
Q 001275 390 VYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQSLGINSSLMQLDFINNSFTGEIPPNLCFGKQLRVLNMGQNQFHG 469 (1109)
Q Consensus 390 l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~ 469 (1109)
+..|++... -+|..+..+..|+.||||+|+++ +.|..+...+++.+|+||+|+|..
T Consensus 85 ~R~N~LKns-----------------------GiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Iet 140 (1255)
T KOG0444|consen 85 VRDNNLKNS-----------------------GIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIET 140 (1255)
T ss_pred hhccccccC-----------------------CCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCcccc
Confidence 444444321 23444444555555555555554 455555555555555555555553
Q ss_pred CCCcccCCCCccchhhccCcccCCCCCCCCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCccc-CCcchhhhc
Q 001275 470 PIPSLLGSCPTLWRVILKQNQLTGALPEFSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFS-GLMPQELGN 548 (1109)
Q Consensus 470 ~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~ 548 (1109)
+.-..+.+++.|..|+||+|++...+|.+..+..|++|+||+|.+...--..+-.+++|++|++|+-+=+ .-+|..+..
T Consensus 141 IPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~ 220 (1255)
T KOG0444|consen 141 IPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDD 220 (1255)
T ss_pred CCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhh
Confidence 3333444555555555555555555555555555555555555554222223333445555555543322 234555555
Q ss_pred ccccceeecccccccccCCccccCCCCccEEEecCccccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhh
Q 001275 549 LVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQ 628 (1109)
Q Consensus 549 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 628 (1109)
|.+|..+|+|.|.+. .+|+.+-++++|+.|+||+|+|+ .+.-..+.+.+|+.|+||.|+++ .+|+.+..|++|+.|+
T Consensus 221 l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy 297 (1255)
T KOG0444|consen 221 LHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLY 297 (1255)
T ss_pred hhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHH
Confidence 555555555555555 55555555555555555555555 44444555555555555555555 5555555555555555
Q ss_pred cccCcCC-CCCCCCchhhhhhhhhhcccccccccccCcchhhcccCCeEEccCCcccccCCC-CCccccceEEeeeccc
Q 001275 629 LGGNQLG-GEIPPSIGALQDLSYALNLSKNGLTGRIPSDLEKLSKLEQLDISSNNLTGTLSP-LSNIHSLVEVNVSYNL 705 (1109)
Q Consensus 629 l~~N~l~-g~ip~~~~~l~~l~~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~~~-l~~~~~l~~l~~~~n~ 705 (1109)
+.+|+++ .-||..||++..| ..+..++|.|. -+|+.+..+..|+.|.|++|+|- ++|. +--++.|+.||+..|+
T Consensus 298 ~n~NkL~FeGiPSGIGKL~~L-evf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNp 373 (1255)
T KOG0444|consen 298 ANNNKLTFEGIPSGIGKLIQL-EVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENP 373 (1255)
T ss_pred hccCcccccCCccchhhhhhh-HHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCc
Confidence 5555554 2355555555555 34555555555 55555555555555555555555 3333 4445555555555553
No 47
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.3e-36 Score=349.42 Aligned_cols=260 Identities=21% Similarity=0.340 Sum_probs=202.8
Q ss_pred hCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 891 (1109)
++|+..+.||+|+||.||+|.. .++..||+|++...........+.+|+++++.+ +|+|||+++++|...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 4788899999999999999864 234579999986544444456788999999999 899999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCC-----------------------------------------------------------
Q 001275 892 IIMYRYMENGSLRDVLHSITP----------------------------------------------------------- 912 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 912 (1109)
++||||+++|+|.++++....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 999999999999999864211
Q ss_pred --------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeec
Q 001275 913 --------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISV 984 (1109)
Q Consensus 913 --------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 984 (1109)
...+++..+++++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..............
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 124788899999999999999999 899999999999999999999999999999866443222222223
Q ss_pred ccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 985 VGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 985 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
.++..|+|||++.+..++.++|||||||++|||++ |+.||...... ........... ....+
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~-~~~~~~~~~~~-------~~~~~--------- 337 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN-SKFYKMVKRGY-------QMSRP--------- 337 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc-HHHHHHHHccc-------CccCC---------
Confidence 45678999999999999999999999999999997 99998643211 11111111000 00000
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.....++.+++.+||+.||++||++.|+++.|+++
T Consensus 338 --~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 338 --DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred --CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00124567788899999999999999999999875
No 48
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=326.89 Aligned_cols=258 Identities=24% Similarity=0.301 Sum_probs=199.7
Q ss_pred HhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccc--------c-----ChHHHHHHHHHHhcCCCCceeeEe
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK--------R-----GSLSMKREIQTIGKIRHRNLVRLE 882 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--------~-----~~~~~~~E~~~l~~l~h~niv~l~ 882 (1109)
.-++|...+.||+|.||.|-+|+. .+++.||||++.+.... . ..+.+.+|+.+|++++|||||+++
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 347899999999999999999965 56899999998554211 1 124788999999999999999999
Q ss_pred eEEecC--CceeEEEEeccCCCHHHHHhccCCCCC-CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC
Q 001275 883 DFWLRK--DCGIIMYRYMENGSLRDVLHSITPPPT-LEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM 959 (1109)
Q Consensus 883 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~-l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 959 (1109)
++..+. +..|+|+|||..|.+.. ...... ++..++++++.++..||+||| .++|+||||||+|+|++++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w----~p~d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKW----CPPDKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCcccc----CCCCcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCC
Confidence 998764 57899999999887743 222233 899999999999999999999 88999999999999999999
Q ss_pred cEEEecccCCcccCCCC---CCceeeecccCcccccccccccCC---C-CccCcchhhHHHHHHHHhCCCCCCCCccccc
Q 001275 960 EPHISDFGIAKLLDKSP---ASTTSISVVGTIGYIAPENAFTTA---K-SKESDVYSYGVVLLELITRKKALDPSYKERT 1032 (1109)
Q Consensus 960 ~~kl~DfGla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~---~-~~~sDvwSlGvil~elltg~~p~~~~~~~~~ 1032 (1109)
++||+|||.+....... ........+|||.|+|||...++. + +.+.||||+||++|.++.|+.||.....
T Consensus 248 ~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--- 324 (576)
T KOG0585|consen 248 TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--- 324 (576)
T ss_pred cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH---
Confidence 99999999998663221 111223468999999999887633 2 6789999999999999999999965422
Q ss_pred cHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1033 DIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
........ ...+. .+..++..+++.+++.+++++||++|.+..||..|.+..
T Consensus 325 --~~l~~KIv----------n~pL~----fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 325 --LELFDKIV----------NDPLE----FPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred --HHHHHHHh----------cCccc----CCCcccccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 11111111 11111 111223445667788899999999999999999998754
No 49
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.9e-36 Score=332.40 Aligned_cols=246 Identities=18% Similarity=0.300 Sum_probs=194.8
Q ss_pred CceeecccCeEEEEEEeCCCcEEEEEEeeeccccc--ChHHHHHHHHHHhcCCCCceeeEeeEEec----CCceeEEEEe
Q 001275 824 KHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR--GSLSMKREIQTIGKIRHRNLVRLEDFWLR----KDCGIIMYRY 897 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 897 (1109)
...||+|++|.||+|.. +|+.||||++....... ..+.+.+|++++++++||||+++++++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 36799999999999988 48899999985432211 13567899999999999999999999876 3467899999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
+++|+|.++++... .+++....+++.+++.|++||| + .+++||||||+||++++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~ 177 (283)
T PHA02988 104 CTRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP 177 (283)
T ss_pred CCCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc
Confidence 99999999997643 4889999999999999999999 5 478899999999999999999999999998654322
Q ss_pred CCceeeecccCccccccccccc--CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 977 ASTTSISVVGTIGYIAPENAFT--TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... .+ ............ . .+
T Consensus 178 -----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~--~~---~~~~i~~~~~~~-~-~~- 244 (283)
T PHA02988 178 -----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT--KE---IYDLIINKNNSL-K-LP- 244 (283)
T ss_pred -----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH--HH---HHHHHHhcCCCC-C-CC-
Confidence 12468899999999876 6789999999999999999999999964321 11 111111111000 0 00
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
......+.+++.+||+.||++||+++|+++.|+..
T Consensus 245 -----------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 245 -----------LDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred -----------CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 01233566788899999999999999999999864
No 50
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=3.9e-36 Score=329.63 Aligned_cols=257 Identities=24% Similarity=0.318 Sum_probs=201.4
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
.++|+..++||+|+||.||.|+. .+|..+|+|++++.. .......+..|-.+|....+|.||+++..|.+.+..|||
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 36899999999999999999954 569999999996544 234456788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||++||++...|...+ .+++..+..++.+.+-|++.+| +.|+|||||||+|+|||..|++||+|||++.-+..
T Consensus 220 MEylPGGD~mTLL~~~~---~L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKD---TLTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEecCCccHHHHHHhcC---cCchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999997644 5999999999999999999999 99999999999999999999999999999853321
Q ss_pred C----------------------CCCc----e-------------------eeecccCcccccccccccCCCCccCcchh
Q 001275 975 S----------------------PAST----T-------------------SISVVGTIGYIAPENAFTTAKSKESDVYS 1009 (1109)
Q Consensus 975 ~----------------------~~~~----~-------------------~~~~~gt~~y~aPE~~~~~~~~~~sDvwS 1009 (1109)
. +... . ....+|||-|+|||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0 0000 0 01247999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC-
Q 001275 1010 YGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP- 1088 (1109)
Q Consensus 1010 lGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP- 1088 (1109)
+|||+|||+.|.+||....... ....++.+. ..-...+ ......+..++|.+|+. ||++|.
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~-T~rkI~nwr--~~l~fP~--------------~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQE-TYRKIVNWR--ETLKFPE--------------EVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHh--hhccCCC--------------cCcccHHHHHHHHHHhc-CHHHhcC
Confidence 9999999999999997643221 111111111 0000000 11111445567779998 999996
Q ss_pred --CHHHHHHHhh
Q 001275 1089 --NMRDVVRQLV 1098 (1109)
Q Consensus 1089 --s~~evl~~L~ 1098 (1109)
.++||-+|-.
T Consensus 436 ~~G~~EIK~HPf 447 (550)
T KOG0605|consen 436 SKGAEEIKKHPF 447 (550)
T ss_pred cccHHHHhcCCc
Confidence 4777777643
No 51
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-36 Score=319.71 Aligned_cols=273 Identities=22% Similarity=0.299 Sum_probs=204.7
Q ss_pred HhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEee-ecccccChHHHHHHHHHHhcCCCCceeeEeeEEec-----CC
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLA-FRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR-----KD 889 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-----~~ 889 (1109)
..+.|...+.||+|+||.|++|.. .+|+.||||++. ........++..+|+.+++.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 345566678899999999999955 568999999985 23445556788899999999999999999998765 34
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
..|+|+|+|+ .+|...++... .++.+.+..+++|+++||.|+| +.+|+|||+||+|++++.+...||+|||+|
T Consensus 100 DvYiV~elMe-tDL~~iik~~~---~L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQ---DLTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCc---cccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccce
Confidence 6799999995 49999988643 3888999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCcccccccccc-cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-ccc
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAF-TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-TEE 1047 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~ 1047 (1109)
+...........+.++.|..|+|||.+. ...||.+.||||.|||+.||++|+..|.+. +.-.++.......... .+.
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~-d~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGK-DYVHQLQLILELLGTPSEED 251 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCC-chHHHHHHHHHhcCCCCHHH
Confidence 9886543344556789999999999775 467899999999999999999999888432 1111111111111111 111
Q ss_pred cccccchhhhHHh----------hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1048 INDIVDLSLMEEM----------LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~----------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
+..+-........ .....+..-...++++.+|+..||.+|+|++|+++|-
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hP 311 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHP 311 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcCh
Confidence 1111111111000 0111122234567788899999999999999999874
No 52
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2e-35 Score=329.53 Aligned_cols=254 Identities=25% Similarity=0.320 Sum_probs=199.6
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
.|+..+.||+|+||+||+|.. .+++.||+|.+..... ......+.+|++++++++|++|+++++++...+..++|+|
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 367788999999999999965 5789999998854332 2233467889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|+|.+++.... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 999999998886432 235889999999999999999999 8999999999999999999999999999998654322
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
......||..|+|||++.+..++.++||||+||++|||++|+.||....... .............. .
T Consensus 157 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~---~------ 223 (285)
T cd05631 157 ---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEVDRRVKEDQE---E------ 223 (285)
T ss_pred ---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHHHHHhhcccc---c------
Confidence 1223578999999999999999999999999999999999999996532211 00011100000000 0
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHh
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN-----MRDVVRQL 1097 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~L 1097 (1109)
.......++.+++.+||+.||++||+ ++|+++|-
T Consensus 224 -------~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~ 262 (285)
T cd05631 224 -------YSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHP 262 (285)
T ss_pred -------CCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCH
Confidence 00112234667888999999999997 89999864
No 53
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=8.9e-36 Score=332.96 Aligned_cols=269 Identities=20% Similarity=0.315 Sum_probs=200.3
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|...++||+|+||+||+|... +++.||+|.+...........+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888999999999999999664 68899999986554444455788999999999999999999999998899999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++ +|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~ 158 (288)
T cd07871 85 LDS-DLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK 158 (288)
T ss_pred CCc-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence 985 9999887543 34788999999999999999999 89999999999999999999999999999976533221
Q ss_pred CceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc-c---------
Q 001275 978 STTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT-E--------- 1046 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~--------- 1046 (1109)
......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... ..+........... .
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 159 --TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK-EELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred --cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhccccch
Confidence 2223568999999998865 56799999999999999999999998653211 11111111111000 0
Q ss_pred ccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1047 EINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1047 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.......+................+..+++.+|++.||.+|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000000000000001112346678889999999999999999976
No 54
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.1e-36 Score=332.33 Aligned_cols=258 Identities=23% Similarity=0.404 Sum_probs=205.0
Q ss_pred hCCCCCceeecccCeEEEEEEeCC------CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP------NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
++|++.+.||+|+||.||+|.... ...||+|.+..........++.+|++.+.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999997543 25789998854444444567899999999999999999999999988999
Q ss_pred EEEEeccCCCHHHHHhccCCC-------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC
Q 001275 893 IMYRYMENGSLRDVLHSITPP-------------PTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM 959 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~-------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 959 (1109)
++|||+++|+|.+++...... ..+++..++.++.|+++|++||| +.+|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCC
Confidence 999999999999999764221 35788999999999999999999 89999999999999999999
Q ss_pred cEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHH
Q 001275 960 EPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWV 1038 (1109)
Q Consensus 960 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~ 1038 (1109)
.++|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||..... .+....+
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--~~~~~~i 239 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--QEVIEMI 239 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 999999999986543332222233456889999999998899999999999999999998 9989864322 1122111
Q ss_pred HHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1039 RSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. .. .. ........++.+++.+||+.||.+||+++|++++|+.
T Consensus 240 ~~---~~--~~-------------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 240 RS---RQ--LL-------------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred Hc---CC--cC-------------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 00 00 0011233567778889999999999999999999975
No 55
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.1e-36 Score=345.36 Aligned_cols=261 Identities=21% Similarity=0.316 Sum_probs=204.8
Q ss_pred hhCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCc
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 890 (1109)
.++|.+.++||+|+||.||+|+.. .+..||||++...........+.+|+++++++. ||||++++++|...+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 457888999999999999999752 234699999865444444567899999999995 9999999999999999
Q ss_pred eeEEEEeccCCCHHHHHhccCC----------------------------------------------------------
Q 001275 891 GIIMYRYMENGSLRDVLHSITP---------------------------------------------------------- 912 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 912 (1109)
.++||||+++|+|.++++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 9999999999999999865321
Q ss_pred -----------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC
Q 001275 913 -----------------------------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS 957 (1109)
Q Consensus 913 -----------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 957 (1109)
...+++..+.+++.|+++|++||| +.+|+||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 124788889999999999999999 899999999999999999
Q ss_pred CCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHH
Q 001275 958 EMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVG 1036 (1109)
Q Consensus 958 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~ 1036 (1109)
++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .....
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~-~~~~~ 351 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD-STFYN 351 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh-HHHHH
Confidence 99999999999986643322222233457788999999999999999999999999999997 88887543211 11111
Q ss_pred HHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1037 WVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.+.. .. .. ........++.+++.+||+.||++||++.++.++|+++
T Consensus 352 ~~~~---~~-~~--------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 352 KIKS---GY-RM--------------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHhc---CC-CC--------------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 1100 00 00 00112234577788999999999999999999999876
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-35 Score=338.65 Aligned_cols=269 Identities=24% Similarity=0.339 Sum_probs=204.9
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|+..+.||+|+||.||++... ++..||+|.+...........+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 57889999999999999999765 67889999886543334456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDP-PIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
+++|+|.+++.... .+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 158 (331)
T cd06649 85 MDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (331)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence 99999999997643 4889999999999999999999 54 69999999999999999999999999997653321
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhh-cCcccccc-c---
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVW-SDTEEIND-I--- 1051 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~--- 1051 (1109)
.....||..|+|||++.+..++.++|||||||++|||++|+.||...... .+...+.... ........ .
T Consensus 159 ----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 159 ----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred ----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccccccccCCccccCcc
Confidence 22357899999999999999999999999999999999999999643211 1111111000 00000000 0
Q ss_pred ------------cch-------hhhHHh----hhc-hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1052 ------------VDL-------SLMEEM----LVS-SIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1052 ------------~d~-------~~~~~~----~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.+. ...... ... .......++.+++.+||+.||++||+++|+++|-+-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 000 000000 000 001123567889999999999999999999998753
No 57
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-36 Score=319.39 Aligned_cols=264 Identities=27% Similarity=0.363 Sum_probs=199.8
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-----ceeE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-----CGII 893 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~l 893 (1109)
.|...+++|+|+||.||+|... +++.||||+.-.+.. .-.+|+++|++++|||||++..+|.... ...+
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 4667889999999999999764 469999998743322 2247999999999999999999886533 3368
Q ss_pred EEEeccCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC-CcEEEecccCCcc
Q 001275 894 MYRYMENGSLRDVLHSI-TPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE-MEPHISDFGIAKL 971 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfGla~~ 971 (1109)
|||||+. +|+++++.. .....++...+.-+..|+.+|++||| +.+|+||||||.|+|+|.+ |.+||+|||.|+.
T Consensus 100 VleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 9999987 999998753 12234777778889999999999999 8999999999999999977 8999999999998
Q ss_pred cCCCCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc-cc
Q 001275 972 LDKSPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE-IN 1049 (1109)
Q Consensus 972 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~ 1049 (1109)
+...... ..+..|..|+|||.+.+. .|+.+.||||.||++.||+-|++.|.+ .....++..+++......++ +.
T Consensus 176 L~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG-~s~~dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 176 LVKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPG-DSSVDQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred eccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCC-CCHHHHHHHHHHHhCCCCHHHHh
Confidence 8765443 446789999999988875 689999999999999999999988754 33444455555444322211 11
Q ss_pred -------cccchhhhHHhhhc-hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1050 -------DIVDLSLMEEMLVS-SIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1050 -------~~~d~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
+.-.+.+....... .......+.++++.++++.+|.+|.++.|++.|
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11111222111111 122334677888889999999999999999876
No 58
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.3e-35 Score=327.69 Aligned_cols=256 Identities=22% Similarity=0.325 Sum_probs=201.9
Q ss_pred hCCCCCceeecccCeEEEEEEeC----CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG----PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
++|++.+.||+|+||.||+|.+. .+..||+|.+...........+.+|++.+++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888899999999999999653 35689999886544444456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++|+|.+++.... ..+++..++.++.|++.|++||| +.+++||||||+||+++.++.++++|||.+.....
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 85 TEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999999997643 35899999999999999999999 89999999999999999999999999998765422
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
... .......++..|+|||.+.+..++.++|||||||++||+++ |+.||...... +....+ .... . .
T Consensus 160 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~---~~~~-~---~-- 227 (266)
T cd05064 160 EAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAV---EDGF-R---L-- 227 (266)
T ss_pred cch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHH---HCCC-C---C--
Confidence 211 11112345678999999999999999999999999999775 99998643211 111111 1000 0 0
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.........+.+++.+||+.+|++||+++|+.+.|.+.
T Consensus 228 ---------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 228 ---------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00112234566788899999999999999999998764
No 59
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.2e-35 Score=332.43 Aligned_cols=249 Identities=23% Similarity=0.293 Sum_probs=200.8
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|+..+.||+|+||+||+|... +++.||+|++.... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999765 68999999985432 1223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999997643 4889999999999999999999 899999999999999999999999999999866432
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
. ....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...............
T Consensus 155 ~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~~~~~------ 218 (291)
T cd05612 155 T-----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEKILAGKLEFP------ 218 (291)
T ss_pred c-----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCcCCC------
Confidence 1 234689999999999999999999999999999999999999864321 111111111100000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhhh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN-----MRDVVRQLVD 1099 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~L~~ 1099 (1109)
......+.+++.+|++.||.+||+ ++|+++|-+-
T Consensus 219 ----------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 257 (291)
T cd05612 219 ----------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWF 257 (291)
T ss_pred ----------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence 011224556788999999999995 9999988643
No 60
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.1e-35 Score=337.03 Aligned_cols=258 Identities=23% Similarity=0.359 Sum_probs=202.8
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCc----EEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNA----VFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
.+|+..+.||+|+||+||+|.+. +++ .||+|++..........++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888999999999999999753 333 38999885444444566788999999999999999999998764 5789
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
|+||+++|+|.++++... ..+++..++.++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~ 160 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 160 (316)
T ss_pred eeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEcccccccccc
Confidence 999999999999998643 34789999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
............++..|+|||++.+..++.++|||||||++||+++ |+.||+..... .+..... ..... .
T Consensus 161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~----~~~~~---~ 231 (316)
T cd05108 161 ADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILE----KGERL---P 231 (316)
T ss_pred CCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHh----CCCCC---C
Confidence 4333222223345678999999999999999999999999999998 99888643211 1111111 10000 0
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
. ......++.+++.+||+.+|.+||++.|++.++.+...
T Consensus 232 ~-----------~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 232 Q-----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred C-----------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 0 01122356778889999999999999999999987743
No 61
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=8.9e-38 Score=342.35 Aligned_cols=383 Identities=26% Similarity=0.378 Sum_probs=294.5
Q ss_pred cCCcEEEeecCCCC-CcCCccccccccccEEEcCCCCCCCCCCCccccccccceeeccCcccCCCCCccccCCCCccEEE
Q 001275 287 SSLTHLDIVGSKLT-GSIPSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEGEIPDELGQLSNLQDLE 365 (1109)
Q Consensus 287 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 365 (1109)
+-.+-.|+++|.++ +..|.....+++++.|.|...++. .+|+.++.+.+|+.|.+++|++. .+-..+..++.|+.+.
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~ 84 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVI 84 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHh
Confidence 44455666666666 345666667777777777777776 67777777777777777777776 4555667777777777
Q ss_pred ccCccccc-cCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcccCCcc-ccCCCCCceEEecCCcc
Q 001275 366 LFDNRLTG-EFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQS-LGINSSLMQLDFINNSF 443 (1109)
Q Consensus 366 L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~~~~L~~L~ls~N~l 443 (1109)
+.+|++.. -+|..+..+..|+.||||+|++. +.|..+..-+++-.|+||+|+|. .||.. +-+++.|-.||||+|.+
T Consensus 85 ~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrL 162 (1255)
T KOG0444|consen 85 VRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRL 162 (1255)
T ss_pred hhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchh
Confidence 77777643 36777777777777777777776 56777777777777777777776 44544 34667777777777777
Q ss_pred cccCCCCcccCccceEEECCCcccccCCCcccCCCCccchhhccCcccCCCCCCCCCCCCCceEEeecCccC-CCCCCcc
Q 001275 444 TGEIPPNLCFGKQLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQNQLTGALPEFSKNPVLSHLDVSRNNIS-GAIPSSI 522 (1109)
Q Consensus 444 ~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~L~~L~Ls~N~i~-~~~p~~~ 522 (1109)
. .+|+.+..+.+|++|+|++|.+.-.--. .+..+++|+.|.+|+-+-+ ..+|.++
T Consensus 163 e-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLr-----------------------QLPsmtsL~vLhms~TqRTl~N~Ptsl 218 (1255)
T KOG0444|consen 163 E-MLPPQIRRLSMLQTLKLSNNPLNHFQLR-----------------------QLPSMTSLSVLHMSNTQRTLDNIPTSL 218 (1255)
T ss_pred h-hcCHHHHHHhhhhhhhcCCChhhHHHHh-----------------------cCccchhhhhhhcccccchhhcCCCch
Confidence 6 5666666777777777777765411111 1223445566666654332 3689999
Q ss_pred cccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEecCccccCCCCcccccccccce
Q 001275 523 GNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNGSIPSSLRSWKSLSI 602 (1109)
Q Consensus 523 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 602 (1109)
.++.||..+|||.|.+. ..|+++.++++|+.|+||+|+|+ .+....+...+|+.|+||.|+++ .+|++++.+++|+.
T Consensus 219 d~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~k 295 (1255)
T KOG0444|consen 219 DDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTK 295 (1255)
T ss_pred hhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHH
Confidence 99999999999999998 78999999999999999999999 67777888899999999999999 89999999999999
Q ss_pred eccccccccC-CCcchhhhhhhhhhhhcccCcCCCCCCCCchhhhhhhhhhcccccccccccCcchhhcccCCeEEccCC
Q 001275 603 LKLSENHFTG-GIPTFISELEKLLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGLTGRIPSDLEKLSKLEQLDISSN 681 (1109)
Q Consensus 603 L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N 681 (1109)
|.+.+|+++- .||..|+.|.+|+.+..++|++. .+|+.++.+.+|. .|+|++|+|. .+|+.+.-|+.|+.|||..|
T Consensus 296 Ly~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~-kL~L~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 296 LYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQ-KLKLDHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred HHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHH-Hhccccccee-echhhhhhcCCcceeeccCC
Confidence 9999999874 49999999999999999999998 8999999999995 7999999999 79999999999999999999
Q ss_pred cccccCCC-CCccccceEEeeec
Q 001275 682 NLTGTLSP-LSNIHSLVEVNVSY 703 (1109)
Q Consensus 682 ~l~g~~~~-l~~~~~l~~l~~~~ 703 (1109)
.=--.+|. -..-+.|++-|+..
T Consensus 373 pnLVMPPKP~da~~~lefYNIDF 395 (1255)
T KOG0444|consen 373 PNLVMPPKPNDARKKLEFYNIDF 395 (1255)
T ss_pred cCccCCCCcchhhhcceeeecce
Confidence 63324443 33346677766553
No 62
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.8e-35 Score=312.98 Aligned_cols=275 Identities=23% Similarity=0.340 Sum_probs=208.0
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCc-eeeEeeEEecCC------
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRN-LVRLEDFWLRKD------ 889 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~------ 889 (1109)
..|...++||+|+||+||+|+. .+|+.||+|++..... +.......+|+.++++++|+| ||++++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 4466677899999999999955 5689999999976655 344556789999999999999 999999998877
Q ss_pred ceeEEEEeccCCCHHHHHhccCCC-CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPP-PTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGI 968 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 968 (1109)
..++|+||++. +|.+++...... ..++...+..++.|+++|++||| +.+|+||||||.||+++++|.+||+|||+
T Consensus 91 ~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccch
Confidence 78899999976 999999876532 34677889999999999999999 99999999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
|+...-+. ......++|..|+|||++.+. .|+...||||+|||++||++++..|.... +..++....+......+.
T Consensus 167 Ara~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~s-e~~ql~~If~~lGtP~e~ 243 (323)
T KOG0594|consen 167 ARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDS-EIDQLFRIFRLLGTPNEK 243 (323)
T ss_pred HHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCc-HHHHHHHHHHHcCCCCcc
Confidence 99664332 224456899999999999887 68999999999999999999988775443 333333333322211111
Q ss_pred c-cc---ccchhh-hHHh-----hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhhC
Q 001275 1048 I-ND---IVDLSL-MEEM-----LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ--LVDA 1100 (1109)
Q Consensus 1048 ~-~~---~~d~~~-~~~~-----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~ 1100 (1109)
. .. ..+.+. .... .....+....+..+++.+|++.+|.+|.+++++++| +...
T Consensus 244 ~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~ 308 (323)
T KOG0594|consen 244 DWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSEL 308 (323)
T ss_pred CCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccc
Confidence 0 00 111110 0000 000011111467788899999999999999999998 5444
No 63
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.4e-35 Score=330.91 Aligned_cols=274 Identities=19% Similarity=0.264 Sum_probs=202.7
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
.++|...+.||+|+||+||+|+.. +++.||+|++...........+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 467999999999999999999775 6889999998654444445567899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|++ +++.+++.... ..++++.+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 996 68888876532 34788999999999999999999 8999999999999999999999999999987543221
Q ss_pred CCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc-------ccc
Q 001275 977 ASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT-------EEI 1048 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~ 1048 (1109)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.........+........... ...
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 158 --HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred --ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence 12233568999999998765 45788999999999999999999999754322111111111110000 000
Q ss_pred ccccchhhhHHhhhchhH------HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1049 NDIVDLSLMEEMLVSSIR------DQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1049 ~~~~d~~~~~~~~~~~~~------~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
... ++............ ....++.+++.+|++.||++|||++|+++|-.-.
T Consensus 236 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~ 292 (303)
T cd07869 236 PHF-KPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS 292 (303)
T ss_pred ccc-ccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence 000 00000000000000 0113456788899999999999999999876543
No 64
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.6e-35 Score=325.42 Aligned_cols=257 Identities=26% Similarity=0.400 Sum_probs=205.8
Q ss_pred hCCCCCceeecccCeEEEEEEeC----CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG----PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
++|+..+.||+|+||+||+|.+. +...||||.+..........++.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56888999999999999999774 24578999886554444556789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++++|.+++.... ..+++..+.+++.|++.|++||| +.+|+||||||+||++++++.++++|||+++....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 84 TEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 99999999999997643 25899999999999999999999 89999999999999999999999999999987752
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
...........++..|+|||.+.+..++.++||||||+++|||++ |..||..... ......+...+. ..
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~~----~~---- 228 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSN--QDVIKAVEDGYR----LP---- 228 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCH--HHHHHHHHcCCC----CC----
Confidence 222222223345678999999998999999999999999999998 9888854321 111111111100 00
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
........+.+++.+|++.+|++||+++|++++|.++
T Consensus 229 ----------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 229 ----------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011234567788899999999999999999999875
No 65
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.4e-36 Score=331.85 Aligned_cols=251 Identities=29% Similarity=0.470 Sum_probs=192.5
Q ss_pred CCceeecccCeEEEEEEeC-----CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 823 AKHVIGRGAHGIVYKASLG-----PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 823 ~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
..+.||.|.||.||+|.+. .+..|+||.+...........+.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3567999999999999776 35789999985544444567899999999999999999999999988889999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++|+|.++++.. ....+++..+.+++.|+++||+||| +.+|+|+||+++||++++++.+||+|||++........
T Consensus 83 ~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred ccccccccccccc-ccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 9999999999886 2345899999999999999999999 88999999999999999999999999999987633322
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
............|+|||.+.+..++.++||||||+++||+++ |+.|+... ...+ +........ ...
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--~~~~---~~~~~~~~~-~~~------- 225 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY--DNEE---IIEKLKQGQ-RLP------- 225 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS--CHHH---HHHHHHTTE-ETT-------
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--cccc---ccccccccc-cce-------
Confidence 222233467789999999999889999999999999999999 67776433 1111 111111111 000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
........+.+++.+||+.||++||++.|+++.|
T Consensus 226 -------~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 -------IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -------SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -------eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 0011233466788899999999999999999876
No 66
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.2e-36 Score=295.97 Aligned_cols=251 Identities=25% Similarity=0.345 Sum_probs=205.2
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|+..+.||+|.||.||.|+. +++-.||+|++.+..-. .....+.+|+++...++||||.++++++.+....|+++
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil 101 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL 101 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence 6789999999999999999965 46788999998555422 33567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||.+.|+++..+.... ...+++.....++.|+|.|+.|+| .++|+||||||+|+|++.++..|++|||.+..-..
T Consensus 102 Eya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~- 176 (281)
T KOG0580|consen 102 EYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 176 (281)
T ss_pred EecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCC-
Confidence 9999999999998533 345788888999999999999999 99999999999999999999999999999975432
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
......+||.-|.|||...+..++.++|+|++|++.||++.|.+||+.... .+....++.. ++.+|
T Consensus 177 ---~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--~etYkrI~k~--------~~~~p- 242 (281)
T KOG0580|consen 177 ---NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--SETYKRIRKV--------DLKFP- 242 (281)
T ss_pred ---CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--HHHHHHHHHc--------cccCC-
Confidence 223346899999999999999999999999999999999999999975431 1111111110 11111
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
..... +..+++.+|+..+|.+|.+..|+++|-+
T Consensus 243 -------~~is~---~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 243 -------STISG---GAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred -------cccCh---hHHHHHHHHhccCccccccHHHHhhhHH
Confidence 11222 3445777999999999999999998865
No 67
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=335.88 Aligned_cols=247 Identities=21% Similarity=0.281 Sum_probs=199.9
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.+|.+.+.||+|+||.||+|+.. +++.||+|.+.... .......+.+|++++++++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999775 58899999985432 2233457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999997643 4788899999999999999999 899999999999999999999999999999866432
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
. ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .................
T Consensus 172 ~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~~~i~~~~~~~p~~---- 237 (329)
T PTZ00263 172 T-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----FRIYEKILAGRLKFPNW---- 237 (329)
T ss_pred c-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----HHHHHHHhcCCcCCCCC----
Confidence 2 134799999999999999999999999999999999999999864321 11111111111011010
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN-----MRDVVRQL 1097 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~L 1097 (1109)
. ..++.+++.+||+.||++||+ ++|+++|-
T Consensus 238 ---------~---~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp 272 (329)
T PTZ00263 238 ---------F---DGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHP 272 (329)
T ss_pred ---------C---CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCC
Confidence 1 123556788999999999996 78888774
No 68
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.7e-35 Score=334.48 Aligned_cols=244 Identities=21% Similarity=0.257 Sum_probs=195.0
Q ss_pred ceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 825 HVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
+.||+|+||.||+|.. .+|+.||+|++.... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999966 468999999986432 2223456788999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCcee
Q 001275 902 SLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTS 981 (1109)
Q Consensus 902 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 981 (1109)
+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~ 152 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATM 152 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Ccc
Confidence 9999987643 4889999999999999999999 8999999999999999999999999999987542221 122
Q ss_pred eecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhh
Q 001275 982 ISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEML 1061 (1109)
Q Consensus 982 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 1061 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..............
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~~~~~~~~~~~------------- 214 (323)
T cd05571 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEEIRF------------- 214 (323)
T ss_pred cceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcCCCCC-------------
Confidence 345799999999999999999999999999999999999999964321 11111111111000
Q ss_pred hchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 001275 1062 VSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQL 1097 (1109)
Q Consensus 1062 ~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L 1097 (1109)
. .....++.+++.+|++.||++|| +++|+++|-
T Consensus 215 p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~ 252 (323)
T cd05571 215 P---RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHR 252 (323)
T ss_pred C---CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCC
Confidence 0 01123456677899999999999 899998763
No 69
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.6e-35 Score=329.15 Aligned_cols=260 Identities=20% Similarity=0.351 Sum_probs=202.1
Q ss_pred HhhCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCc
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 890 (1109)
++++|+..+.||+|+||.||+|... .+..||+|++..........++.+|+.+++.++|+||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4577999999999999999998653 3567999987543333345578899999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHHhccCC-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEE
Q 001275 891 GIIMYRYMENGSLRDVLHSITP-------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHI 963 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 963 (1109)
.++||||+++|+|.++++.... ....++..+..++.|+++|++||| +.+++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 9999999999999999975332 124678899999999999999999 889999999999999999999999
Q ss_pred ecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhh
Q 001275 964 SDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVW 1042 (1109)
Q Consensus 964 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1042 (1109)
+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||..... ......+ .
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~~~~~---~ 235 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRFV---M 235 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH---H
Confidence 99999986543322221122345788999999998899999999999999999999 6777753311 1111111 1
Q ss_pred cCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1043 SDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1043 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
... .... .......+.+++.+|++.+|++||++.|+++++++
T Consensus 236 ~~~--~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 236 EGG--LLDK-------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred cCC--cCCC-------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 000 0000 01122346778889999999999999999999864
No 70
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.5e-35 Score=338.03 Aligned_cols=260 Identities=23% Similarity=0.350 Sum_probs=201.9
Q ss_pred hCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecC-Cc
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRK-DC 890 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 890 (1109)
++|++.++||+|+||.||+|... +++.||+|++...........+.+|++++.++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 57889999999999999999532 34789999885443333445678899999999 899999999988654 56
Q ss_pred eeEEEEeccCCCHHHHHhccCC----------------------------------------------------------
Q 001275 891 GIIMYRYMENGSLRDVLHSITP---------------------------------------------------------- 912 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 912 (1109)
.++++||+++|+|.+++.....
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 7899999999999999864321
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCccccc
Q 001275 913 PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIA 992 (1109)
Q Consensus 913 ~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~a 992 (1109)
...++|..+.+++.|+++|++||| +.+|+||||||+||++++++.++|+|||+++.+.............++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 125789999999999999999999 89999999999999999999999999999987644332222223456778999
Q ss_pred ccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHH
Q 001275 993 PENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVID 1071 (1109)
Q Consensus 993 PE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 1071 (1109)
||++.+..++.++||||+||++|||++ |+.||...... ....... ...... . . ......+
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~-~~~~~~~----~~~~~~--~-~-----------~~~~~~~ 304 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID-EEFCRRL----KEGTRM--R-A-----------PEYATPE 304 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc-HHHHHHH----hccCCC--C-C-----------CccCCHH
Confidence 999999999999999999999999998 98888542111 1111111 000000 0 0 0112345
Q ss_pred HHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1072 VLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1072 l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+.+++.+||+.+|++||++.|++++|+++
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 77888999999999999999999999886
No 71
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-36 Score=299.13 Aligned_cols=263 Identities=23% Similarity=0.340 Sum_probs=205.0
Q ss_pred hCCCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-----cee
Q 001275 819 ENLNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-----CGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 892 (1109)
++|++.+.+|+|||..||.++ ..+++.||+|++.... .++....++|++..++++||||++++++...+. +.|
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEE
Confidence 578889999999999999996 5678999999996544 566778899999999999999999999876543 489
Q ss_pred EEEEeccCCCHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 893 IMYRYMENGSLRDVLHSITP-PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++++|...|+|.+.+..... ...+++.+++.|+.++++||++||.. .++++||||||.||++.+++.+++.|||.+..
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~ 178 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQ 178 (302)
T ss_pred EEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccc
Confidence 99999999999999976543 44799999999999999999999932 33499999999999999999999999999875
Q ss_pred cCCCCCC-------ceeeecccCcccccccccc---cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHh
Q 001275 972 LDKSPAS-------TTSISVVGTIGYIAPENAF---TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSV 1041 (1109)
Q Consensus 972 ~~~~~~~-------~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~ 1041 (1109)
..-.-.. ........|..|+|||.+. +...++++||||+||++|+|+.|..||+..++....+.-
T Consensus 179 a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL----- 253 (302)
T KOG2345|consen 179 APIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL----- 253 (302)
T ss_pred cceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE-----
Confidence 5321110 1122346899999999775 445589999999999999999999999865442221111
Q ss_pred hcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1042 WSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1042 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.+..+.+. .+......+.+.+++.+|++.||.+||++.|++.++.+.
T Consensus 254 --------Av~n~q~s----~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 254 --------AVQNAQIS----IPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred --------eeeccccc----cCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11111111 011112445677788899999999999999999998765
No 72
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.4e-35 Score=328.30 Aligned_cols=258 Identities=26% Similarity=0.403 Sum_probs=204.8
Q ss_pred hCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
++|.+.+.||+|+||.||+|... +++.||+|.+......+....+.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 46788899999999999999763 347899999865444445678999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcE
Q 001275 893 IMYRYMENGSLRDVLHSITP-----------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEP 961 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 961 (1109)
+||||+++|+|.++++..+. ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeE
Confidence 99999999999999976432 235789999999999999999999 8999999999999999999999
Q ss_pred EEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHH
Q 001275 962 HISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRS 1040 (1109)
Q Consensus 962 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 1040 (1109)
||+|||+++...............+++.|+|||++.+..++.++||||+||++|||++ |+.||...... .....+
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~-- 237 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECI-- 237 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHH--
Confidence 9999999986543322222223456788999999999999999999999999999998 99998543221 111111
Q ss_pred hhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1041 VWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1041 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.... .... .......+.+++.+||+.||++||+++|+++.|.+
T Consensus 238 -~~~~--~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 238 -TQGR--LLQR-------------PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred -HcCC--cCCC-------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 1000 0000 01122446678889999999999999999998863
No 73
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.1e-35 Score=326.98 Aligned_cols=268 Identities=20% Similarity=0.276 Sum_probs=200.2
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|++.+.||+|+||+||+|+.. +++.||+|++..... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEY 81 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEec
Confidence 6888999999999999999775 578999999865432 23345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++++.+..+... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 82 VEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred CCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 998877655432 234889999999999999999999 89999999999999999999999999999987643221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-----------cc
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-----------TE 1046 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----------~~ 1046 (1109)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...... ...... ..
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 156 -ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-DQLFTI-QKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred -ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHH-HHhhCCCCHHHHHhhhccc
Confidence 1222357899999999999989999999999999999999999998643211 111111 110000 00
Q ss_pred ccccccchhhh--HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1047 EINDIVDLSLM--EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1047 ~~~~~~d~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.......+... .............++.+++.+|++.||++||+++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000000 000000001123457788899999999999999999976
No 74
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3.8e-35 Score=326.35 Aligned_cols=264 Identities=22% Similarity=0.331 Sum_probs=202.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCc----EEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNA----VFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
.+|+..+.||+|+||+||+|.+. +++ .+++|.+..........++..|+..+++++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 46788899999999999999764 344 467777643333333456788888999999999999999875 456789
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
++||+++|+|.++++... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++...
T Consensus 86 i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~ 160 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLY 160 (279)
T ss_pred EEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence 999999999999997643 35899999999999999999999 8899999999999999999999999999998664
Q ss_pred CCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
............++..|+|||...+..++.++|||||||++||+++ |+.||...... ....++ ...... .
T Consensus 161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~----~~~~~~---~ 231 (279)
T cd05111 161 PDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLL----EKGERL---A 231 (279)
T ss_pred CCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH----HCCCcC---C
Confidence 3322222233457789999999998999999999999999999998 98888543211 111111 111100 0
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCCCCCCCC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVPMTSKYV 1109 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~~ 1109 (1109)
.+. ....++..++.+||..+|++||++.|+++.|.....+ +++|+
T Consensus 232 ~~~-----------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~-~~~~~ 276 (279)
T cd05111 232 QPQ-----------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD-PPRYL 276 (279)
T ss_pred CCC-----------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC-Cccee
Confidence 000 1123456688899999999999999999999887443 36653
No 75
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=4.4e-35 Score=321.57 Aligned_cols=252 Identities=22% Similarity=0.336 Sum_probs=201.5
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
.+|+..+.||+|+||.||+|+.+++..+|+|.+.. ......++.+|++++++++||||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINE--GAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEeccc--CCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 45778889999999999999998888999998742 2334567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.++++... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.+|++|||.++.......
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05114 82 ENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY- 155 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-
Confidence 9999999997533 24889999999999999999999 89999999999999999999999999999986543222
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .+....+ ..... ...+.
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i---~~~~~----~~~~~-- 224 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMI---SRGFR----LYRPK-- 224 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH---HCCCC----CCCCC--
Confidence 11122345678999999988889999999999999999999 8888854321 1111111 11100 00000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
....++.+++.+||+.+|++||+++|+++.|.
T Consensus 225 ---------~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 225 ---------LASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ---------CCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 11235678889999999999999999998863
No 76
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.6e-35 Score=334.67 Aligned_cols=199 Identities=28% Similarity=0.417 Sum_probs=173.9
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|+..++||+|+||.||+|... ++..+|+|.+...........+.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 67899999999999999999775 57888999875543334456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
+++|+|.+++.... .+++..+..++.++++|++||| + .+|+||||||+||+++.++.+||+|||++.......
T Consensus 85 ~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~ 158 (333)
T cd06650 85 MDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 158 (333)
T ss_pred CCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence 99999999997643 4788999999999999999999 5 479999999999999999999999999987653321
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 159 ----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~ 205 (333)
T cd06650 159 ----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPP 205 (333)
T ss_pred ----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 12346899999999999888999999999999999999999998653
No 77
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.6e-35 Score=335.25 Aligned_cols=255 Identities=20% Similarity=0.256 Sum_probs=201.9
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|++++.+++||||+++++++...+..++|||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 81 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAME 81 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEe
Confidence 6888999999999999999775 588999999864422 2234568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 82 YVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred CCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 999999999997643 4889999999999999999999 89999999999999999999999999999986543
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... +....+.. +..........++.
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~--~~~~~i~~-~~~~~~~~~~~~~~- 226 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPN--ETWENLKY-WKETLQRPVYDDPR- 226 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHH--HHHHHHHh-ccccccCCCCCccc-
Confidence 122357999999999999999999999999999999999999999643211 11111110 00000000000000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.....++.+++.+|++.+|++||+++|+++|-.
T Consensus 227 ---------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~ 259 (333)
T cd05600 227 ---------FNLSDEAWDLITKLINDPSRRFGSLEDIKNHPF 259 (333)
T ss_pred ---------cccCHHHHHHHHHHhhChhhhcCCHHHHHhCcc
Confidence 112344667788999999999999999998843
No 78
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=333.48 Aligned_cols=248 Identities=20% Similarity=0.261 Sum_probs=199.1
Q ss_pred hCCCCCceeecccCeEEEEEEeCC--CcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP--NAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
++|...+.||+|+||.||+|.... +..||+|++.... .......+.+|+++++.++||||+++++++...+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 568889999999999999997543 3689999885432 223345688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999997643 4889999999999999999999 89999999999999999999999999999986543
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.. ....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 184 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-----~~~~~i~~~~~~~p----- 248 (340)
T PTZ00426 184 RT-----YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-----LIYQKILEGIIYFP----- 248 (340)
T ss_pred Cc-----ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-----HHHHHHhcCCCCCC-----
Confidence 21 2357999999999999988999999999999999999999999643211 11111111110000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQLV 1098 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~ 1098 (1109)
.... .++.+++.+|++.||++|+ +++|+++|-+
T Consensus 249 --------~~~~---~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~ 286 (340)
T PTZ00426 249 --------KFLD---NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPW 286 (340)
T ss_pred --------CCCC---HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCC
Confidence 0111 2345677799999999995 8999998843
No 79
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.9e-35 Score=321.61 Aligned_cols=255 Identities=23% Similarity=0.341 Sum_probs=204.1
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|++.++||+|+||.||+|...+++.||+|.+... ......+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG--TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC--chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 568889999999999999999888889999987432 234567899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.++++... ...+++..++.++.|+++|++||| +.+++||||||+||+++.++.++|+|||+++.......
T Consensus 84 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05072 84 AKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY- 158 (261)
T ss_pred CCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence 9999999997643 345889999999999999999999 89999999999999999999999999999987643321
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||++.+..++.++|||||||++|+|++ |+.||..... .+....+...+ ...
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~----~~~-------- 224 (261)
T cd05072 159 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN--SDVMSALQRGY----RMP-------- 224 (261)
T ss_pred eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH--HHHHHHHHcCC----CCC--------
Confidence 11122346778999999988889999999999999999998 8888854221 11111111100 000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......++.+++.+|++.+|++||+++++.+.|+++
T Consensus 225 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 225 ------RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0011223466788899999999999999999999863
No 80
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.8e-35 Score=320.22 Aligned_cols=256 Identities=23% Similarity=0.330 Sum_probs=204.4
Q ss_pred hhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.++|++.+.||+|+||.||+|...+++.||+|.+... .....++.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPG--TMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCC--cccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 3568889999999999999998888889999987432 23456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++.... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999999997643 345899999999999999999999 89999999999999999999999999999987653221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
........+..|+|||+..+..++.++||||||+++|||++ |+.||...... .....+.. . ... .
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~---~-~~~----~--- 224 (261)
T cd05068 159 -EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVDQ---G-YRM----P--- 224 (261)
T ss_pred -cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHc---C-CCC----C---
Confidence 11122234568999999999899999999999999999999 88888543211 11111110 0 000 0
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
........+.+++.+|++.+|++||+++++++.|++.
T Consensus 225 -------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 225 -------CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred -------CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0011234567788899999999999999999999863
No 81
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=4.5e-35 Score=328.48 Aligned_cols=260 Identities=23% Similarity=0.362 Sum_probs=205.0
Q ss_pred hhCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCc
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 890 (1109)
.++|+..+.||+|+||.||+|... ....+|+|.+..........++.+|++++.++ +|+||+++++++...+.
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 356888899999999999999763 23678999886544444456788999999999 89999999999999999
Q ss_pred eeEEEEeccCCCHHHHHhccC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC
Q 001275 891 GIIMYRYMENGSLRDVLHSIT-------------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS 957 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 957 (1109)
.++||||+++|+|.++++... ....+++..+++++.|++.|++||| +.+|+||||||+||+++.
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcC
Confidence 999999999999999997532 2346899999999999999999999 899999999999999999
Q ss_pred CCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHH
Q 001275 958 EMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVG 1036 (1109)
Q Consensus 958 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~ 1036 (1109)
++.+|++|||+++.+.............++..|+|||+..+..++.++|||||||++||+++ |..||..... .+...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~ 245 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--EELFK 245 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH--HHHHH
Confidence 99999999999987654332222222345678999999988899999999999999999998 8888753211 11111
Q ss_pred HHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1037 WVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.. .... .. ........++.+++.+|++.+|++|||++|+++.|+++
T Consensus 246 ~~---~~~~-~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 246 LL---KEGY-RM--------------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HH---HcCC-cC--------------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 11 1000 00 00112234577788999999999999999999999876
No 82
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=344.20 Aligned_cols=257 Identities=25% Similarity=0.350 Sum_probs=205.0
Q ss_pred hCCCCCceeecccCeEEEEEEeCCC-cEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEee-EEec------CC
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPN-AVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLED-FWLR------KD 889 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~-~~~~------~~ 889 (1109)
.++++.++|.+|||+.||.|....+ ..||+|++... ++.....+.+|+++|++++ |+|||.+++ .... ..
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 3456778999999999999987666 99999999554 7777888999999999996 999999999 3221 13
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
+.++.||||+||.|-|++..+.... +++.++++|+.++++|+++||+. +++|+|||||.+|||++.++..||||||.|
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 5789999999999999998654333 99999999999999999999954 788999999999999999999999999998
Q ss_pred cccCCCCCCc-------eeeecccCccccccccc---ccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHH
Q 001275 970 KLLDKSPAST-------TSISVVGTIGYIAPENA---FTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVR 1039 (1109)
Q Consensus 970 ~~~~~~~~~~-------~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~ 1039 (1109)
.-........ .......|+.|+|||++ .+...++|+|||++||++|-++....||+....-
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------- 264 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------- 264 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---------
Confidence 7433222111 11234689999999966 4677899999999999999999999999753111
Q ss_pred HhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1040 SVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
.+++... ..+..+.....+..||..|+++||.+||++-+|+..+.++.
T Consensus 265 ----------aIlng~Y----~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~ 312 (738)
T KOG1989|consen 265 ----------AILNGNY----SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELA 312 (738)
T ss_pred ----------eEEeccc----cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHh
Confidence 1212111 11122345566777888999999999999999999998763
No 83
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.3e-35 Score=325.50 Aligned_cols=258 Identities=22% Similarity=0.365 Sum_probs=202.0
Q ss_pred hCCCCCceeecccCeEEEEEEe-----CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-----GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
.+|++.+.||+|+||+||+|.. ..+..||+|.+...........+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 3577788999999999999974 35678999988644444445678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC
Q 001275 894 MYRYMENGSLRDVLHSITP--------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM 959 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 959 (1109)
||||+++|+|.+++..... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 9999999999999864321 234788999999999999999999 88999999999999999999
Q ss_pred cEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHH
Q 001275 960 EPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWV 1038 (1109)
Q Consensus 960 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~ 1038 (1109)
.+|++|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||..... ..+...+
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~ 239 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMV 239 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 999999999986644332222233456778999999988889999999999999999998 8888754311 1111111
Q ss_pred HHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1039 RSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
... . .. . .......++.+++.+|++.||++||++.++.++|..
T Consensus 240 ~~~---~-~~-~-------------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 240 RKR---Q-LL-P-------------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HcC---C-cC-C-------------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 110 0 00 0 001112346668889999999999999999998863
No 84
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=9e-35 Score=328.64 Aligned_cols=241 Identities=21% Similarity=0.293 Sum_probs=192.1
Q ss_pred eecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 827 IGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
||+|+||.||+|... +++.||+|++.... .......+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999765 57899999985432 233345678899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeee
Q 001275 904 RDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSIS 983 (1109)
Q Consensus 904 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 983 (1109)
.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 152 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNT 152 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccc
Confidence 99997643 4889999999999999999999 8999999999999999999999999999998543221 12233
Q ss_pred cccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 984 VVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 984 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
..||+.|+|||++.+..++.++||||+||++|||++|+.||.... ................ .
T Consensus 153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~~~~~~~-------------~ 214 (312)
T cd05585 153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQEPLRFP-------------D 214 (312)
T ss_pred ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCCCCCC-------------C
Confidence 579999999999999999999999999999999999999996432 1122222111110000 0
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCC---CHHHHHHH
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRP---NMRDVVRQ 1096 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RP---s~~evl~~ 1096 (1109)
....++.+++.+|++.||++|| ++.|+++|
T Consensus 215 ---~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 215 ---GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred ---cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 1123455677899999999997 46777766
No 85
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-34 Score=336.33 Aligned_cols=266 Identities=19% Similarity=0.221 Sum_probs=199.0
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|.+.+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++......++|+|+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 5799999999999999999965 568899999642 23467899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+. ++|.+++.... .+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+|+......
T Consensus 165 ~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~- 236 (391)
T PHA03212 165 YK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN- 236 (391)
T ss_pred CC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccccccc-
Confidence 95 68988886543 4789999999999999999999 8899999999999999999999999999997543221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccc------cccHHHHHHHhhcCccccc--
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKE------RTDIVGWVRSVWSDTEEIN-- 1049 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~-- 1049 (1109)
........||+.|+|||++.+..++.++||||+||++|||++|+.|+...... ...+...+...........
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 11223457999999999999999999999999999999999999887542211 1111111111111000000
Q ss_pred --cccchhh---hH--------HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1050 --DIVDLSL---ME--------EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1050 --~~~d~~~---~~--------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
...+... .. ............++.+++.+|++.||++|||++|+++|=+-
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f 379 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAF 379 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhh
Confidence 0000000 00 00000111234567788999999999999999999987554
No 86
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-36 Score=299.54 Aligned_cols=256 Identities=26% Similarity=0.387 Sum_probs=202.1
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccC---h----HHHHHHHHHHhcC-CCCceeeEeeEEecC
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRG---S----LSMKREIQTIGKI-RHRNLVRLEDFWLRK 888 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~---~----~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 888 (1109)
-+.|...+++|+|..++|.++.. .+|..+|+|++...+.... . ..-.+|+.+++++ .||+|+++.++|..+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 46788889999999999999844 5688999999865443221 2 2345799999999 799999999999999
Q ss_pred CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccC
Q 001275 889 DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGI 968 (1109)
Q Consensus 889 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 968 (1109)
...++|+|.|+.|.|.|++.+.- ++++++..+|+.|+.+|++||| ...||||||||+|||++++.++||+|||+
T Consensus 96 sF~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred chhhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccce
Confidence 99999999999999999998643 5899999999999999999999 99999999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccc------cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhh
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAF------TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVW 1042 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1042 (1109)
|+.+..+.. ....+|||+|.|||.+. ...|+..+|+|++|||+|.++.|.+||..-. ++. .++...
T Consensus 170 a~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk----Qml-MLR~Im 241 (411)
T KOG0599|consen 170 ACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK----QML-MLRMIM 241 (411)
T ss_pred eeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH----HHH-HHHHHH
Confidence 998865543 33479999999999775 3457889999999999999999999996321 111 111111
Q ss_pred cCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1043 SDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1043 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
+..- .+..+...+......+++.+|++.||++|.|++|+++|-.-
T Consensus 242 eGky------------qF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff 286 (411)
T KOG0599|consen 242 EGKY------------QFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFF 286 (411)
T ss_pred hccc------------ccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHH
Confidence 1100 01111222333445567779999999999999999988643
No 87
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=8.9e-35 Score=325.54 Aligned_cols=268 Identities=23% Similarity=0.321 Sum_probs=195.4
Q ss_pred hCCCCCceeecccCeEEEEEEe--CCCcEEEEEEeeeccccc-ChHHHHHHHHHHhcC---CCCceeeEeeEEec-----
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL--GPNAVFAVKKLAFRGHKR-GSLSMKREIQTIGKI---RHRNLVRLEDFWLR----- 887 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~h~niv~l~~~~~~----- 887 (1109)
++|++.+.||+|+||+||+|+. .+++.||+|++....... ....+.+|+.+++++ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 3688899999999999999976 346889999886543322 234566787777766 69999999999853
Q ss_pred CCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 888 KDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 888 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
....++||||++ ++|.+++.... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 345799999997 59999987643 234889999999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-cc
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-TE 1046 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~ 1046 (1109)
+++..... .......||+.|+|||.+.+..++.++||||+||++|||++|+.||...... ..+...+...... ..
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 156 LARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEE 231 (290)
T ss_pred ceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHHhCCCChh
Confidence 99866433 1223357899999999999889999999999999999999999998654221 1111111111000 00
Q ss_pred ccc-------cccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1047 EIN-------DIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1047 ~~~-------~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
... ....... ........+.....+.+++.+|++.||++||++.|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 232 DWPRDVALPRQAFHSKS-AQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred hchhhhcccchhccCCC-CCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 000 0000000 000000001122445678889999999999999999975
No 88
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.3e-35 Score=335.31 Aligned_cols=252 Identities=25% Similarity=0.383 Sum_probs=194.0
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|+..++||+|+||+||+|+.. +++.||||++...........+.+|++++++++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 34556788999999999999764 68999999985444444456789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++|+|.+.. ...+..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 154 ~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~ 223 (353)
T PLN00034 154 MDGGSLEGTH-------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD 223 (353)
T ss_pred CCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence 9999986532 2456778899999999999999 89999999999999999999999999999986643221
Q ss_pred CceeeecccCccccccccccc-----CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 978 STTSISVVGTIGYIAPENAFT-----TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
......||..|+|||++.. ...+.++|||||||++|||++|+.||..... .+.............
T Consensus 224 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~------ 293 (353)
T PLN00034 224 --PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCAICMSQP------ 293 (353)
T ss_pred --cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhccCC------
Confidence 1223579999999998743 2335689999999999999999999963211 111111111100000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.........++.+++.+||+.||++||+++|+++|-+-
T Consensus 294 ---------~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~ 331 (353)
T PLN00034 294 ---------PEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331 (353)
T ss_pred ---------CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 00001122356778889999999999999999998543
No 89
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-34 Score=329.37 Aligned_cols=244 Identities=22% Similarity=0.261 Sum_probs=194.1
Q ss_pred ceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 825 HVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
+.||+|+||.||++.. .+|+.||+|++.... .......+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 4699999999999976 468999999985432 2233456778999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCcee
Q 001275 902 SLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTS 981 (1109)
Q Consensus 902 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 981 (1109)
+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~ 152 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATM 152 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Ccc
Confidence 9999887543 4889999999999999999999 8999999999999999999999999999987532221 122
Q ss_pred eecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhh
Q 001275 982 ISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEML 1061 (1109)
Q Consensus 982 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 1061 (1109)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... .............
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~~~~~~~~~------------- 214 (323)
T cd05595 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFELILMEEIRF------------- 214 (323)
T ss_pred ccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCCCC-------------
Confidence 3357999999999999999999999999999999999999998643211 1111111111000
Q ss_pred hchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 001275 1062 VSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQL 1097 (1109)
Q Consensus 1062 ~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L 1097 (1109)
+. ....++.+++.+|++.||++|| ++.|+++|-
T Consensus 215 p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~ 252 (323)
T cd05595 215 PR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 252 (323)
T ss_pred CC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCC
Confidence 00 1123455677799999999998 899998764
No 90
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.6e-34 Score=324.28 Aligned_cols=265 Identities=22% Similarity=0.316 Sum_probs=200.6
Q ss_pred hCCCCCceeecccCeEEEEEEeCC---------------CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP---------------NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLED 883 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 883 (1109)
++|++.++||+|+||.||++.... ...||+|.+...........+.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999986532 23589998854433444557899999999999999999999
Q ss_pred EEecCCceeEEEEeccCCCHHHHHhccCC---------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCee
Q 001275 884 FWLRKDCGIIMYRYMENGSLRDVLHSITP---------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENIL 954 (1109)
Q Consensus 884 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIl 954 (1109)
++...+..++||||+++++|.+++..... ...+++..++.++.|+++|++||| +.+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEE
Confidence 99999999999999999999999865321 124688999999999999999999 899999999999999
Q ss_pred eCCCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh--CCCCCCCCccccc
Q 001275 955 LDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT--RKKALDPSYKERT 1032 (1109)
Q Consensus 955 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~~~~~~~ 1032 (1109)
+++++.+||+|||++................++..|+|||+..++.++.++|||||||++|+|++ |..||..... .
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~--~ 239 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD--E 239 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh--H
Confidence 99999999999999986543322222222345778999999998899999999999999999998 4556643211 1
Q ss_pred cHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1033 DIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.........+........... .......+.+++.+||+.||++||+++++++.|.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 240 QVIENTGEFFRNQGRQIYLSQ-----------TPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred HHHHHHHHhhhhccccccCCC-----------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 111111111111000000000 01122457788999999999999999999998863
No 91
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-37 Score=301.75 Aligned_cols=257 Identities=23% Similarity=0.319 Sum_probs=201.9
Q ss_pred hhCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+++|++.++||+|.|+.||++ ...+|+.+|+|.+.... ...+.+++.+|+++-+.++|||||++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 467788889999999999998 44578999999874332 3336678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC---CcEEEecccCCccc
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE---MEPHISDFGIAKLL 972 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfGla~~~ 972 (1109)
|+|+|++|..-+-.. ..+++..+-..+.||+++++|+| .++|||||+||.|+++... --+|++|||+|..+
T Consensus 90 e~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 999999997655332 24677778889999999999999 9999999999999999543 35899999999988
Q ss_pred CCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
.. .....+.+|||+|||||++...+|+..+|||+.|||+|-++.|+.||..... .++.+ ......-.+
T Consensus 164 ~~---g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~--~rlye---~I~~g~yd~---- 231 (355)
T KOG0033|consen 164 ND---GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYE---QIKAGAYDY---- 231 (355)
T ss_pred CC---ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH--HHHHH---HHhccccCC----
Confidence 63 3344568999999999999999999999999999999999999999975322 22222 111111111
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
++ ...+...+++. +++.+|+..||.+|.|+.|+++|-+-.
T Consensus 232 ~~-----~~w~~is~~Ak---~LvrrML~~dP~kRIta~EAL~HpWi~ 271 (355)
T KOG0033|consen 232 PS-----PEWDTVTPEAK---SLIRRMLTVNPKKRITADEALKHPWIC 271 (355)
T ss_pred CC-----cccCcCCHHHH---HHHHHHhccChhhhccHHHHhCCchhc
Confidence 11 01112334444 466699999999999999999887643
No 92
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=331.60 Aligned_cols=242 Identities=25% Similarity=0.349 Sum_probs=194.6
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 894 (1109)
++|...++||+|.||+|+.+..+ +++.+|||.+++.. ...+....+.|.+++... +||.+++++.+|...++.|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 67899999999999999999765 57899999996654 234456778888888877 599999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+.||++..+.+ ...+++..+..+|..|+.||+||| +++|||||||.+|||+|.+|.+||+|||+++.-..
T Consensus 448 mey~~Ggdm~~~~~----~~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 448 MEYVAGGDLMHHIH----TDVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEecCCCcEEEEEe----cccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccCC
Confidence 99999999444333 235899999999999999999999 99999999999999999999999999999985432
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.. .....++||+.|||||++.+..|+..+|.|||||++|||+.|..||.+..++ ++. .....+ +..-
T Consensus 521 ~g--~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe--e~F---dsI~~d-----~~~y- 587 (694)
T KOG0694|consen 521 QG--DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE--EVF---DSIVND-----EVRY- 587 (694)
T ss_pred CC--CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH--HHH---HHHhcC-----CCCC-
Confidence 22 2334579999999999999999999999999999999999999999654222 111 111111 1111
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCH
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNM 1090 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 1090 (1109)
..-...+.+.++.+++..+|++|..+
T Consensus 588 ----------P~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 588 ----------PRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ----------CCcccHHHHHHHHHHhccCcccccCC
Confidence 11223456667889999999999865
No 93
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.6e-34 Score=328.64 Aligned_cols=245 Identities=22% Similarity=0.270 Sum_probs=195.4
Q ss_pred ceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 825 HVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
+.||+|+||.||++.. .+++.||+|++.... .......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999976 468999999985432 2233457788999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCcee
Q 001275 902 SLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTS 981 (1109)
Q Consensus 902 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~ 981 (1109)
+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~ 152 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATM 152 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--ccc
Confidence 9999887543 4889999999999999999999 8999999999999999999999999999987542221 122
Q ss_pred eecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhh
Q 001275 982 ISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEML 1061 (1109)
Q Consensus 982 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 1061 (1109)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .............+
T Consensus 153 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~~~~~~~~~------------- 214 (328)
T cd05593 153 KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEDIKF------------- 214 (328)
T ss_pred ccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHHhccCCccC-------------
Confidence 335799999999999999999999999999999999999999964321 11111111111000
Q ss_pred hchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 001275 1062 VSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQLV 1098 (1109)
Q Consensus 1062 ~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~ 1098 (1109)
+. ....++.+++.+|++.||++|| +++|+++|-+
T Consensus 215 p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 253 (328)
T cd05593 215 PR---TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSF 253 (328)
T ss_pred CC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCC
Confidence 00 1123456677899999999997 8999998743
No 94
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8.8e-35 Score=325.62 Aligned_cols=261 Identities=23% Similarity=0.365 Sum_probs=204.8
Q ss_pred hCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
++|...+.||+|+||.||+|... ++..+++|.+.. ......+.+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-PTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI 83 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC-ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence 45777889999999999999642 345688888732 22333457899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC
Q 001275 893 IMYRYMENGSLRDVLHSITP-------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM 959 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 959 (1109)
+||||+++++|.+++..... ...+++..++.++.|++.|++||| +.+|+||||||+||+++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCC
Confidence 99999999999999975431 234889999999999999999999 89999999999999999999
Q ss_pred cEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHH
Q 001275 960 EPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWV 1038 (1109)
Q Consensus 960 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~ 1038 (1109)
.++|+|||++................++..|+|||++.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~--- 235 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--EVI--- 235 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHH---
Confidence 999999999986644322222233456789999999999999999999999999999999 99887543221 111
Q ss_pred HHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCC
Q 001275 1039 RSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVP 1103 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1103 (1109)
....... .... ......++.+++.+||+.+|++||+++++++.|.++..+
T Consensus 236 ~~~~~~~--~~~~-------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 236 ECITQGR--VLER-------------PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHhCCC--CCCC-------------CccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111100 0000 011234567788899999999999999999999998443
No 95
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=325.66 Aligned_cols=255 Identities=24% Similarity=0.327 Sum_probs=209.1
Q ss_pred hCCCCCceeecccCeEEEEEEeC---CC--cEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG---PN--AVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~---~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
+.....++||.|.||.||+|.+. .| -.||||..+..........|..|..+|++++|||||+++|+|.+ ...++
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 34455678999999999999553 23 35788887666666677889999999999999999999999975 56899
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
|||.++.|.|..|++... ..++......++.|++.||+||| +..+|||||..+|||+.....+|++|||+++.+.
T Consensus 468 vmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e 542 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE 542 (974)
T ss_pred EEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhcc
Confidence 999999999999998754 35888889999999999999999 9999999999999999999999999999999987
Q ss_pred CCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
+....... ...-+..|||||.+.-++++.++|||.|||.+||+++ |..||..-... +.+..+-
T Consensus 543 d~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs---------------DVI~~iE 606 (974)
T KOG4257|consen 543 DDAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS---------------DVIGHIE 606 (974)
T ss_pred ccchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc---------------ceEEEec
Confidence 66554433 3456779999999999999999999999999999987 88898653221 1111111
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.. .-.+..+.+++.++.++.+||.+||.+||.+.|+...|.++
T Consensus 607 nG-----eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 607 NG-----ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred CC-----CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 11 11122456778899999999999999999999999888764
No 96
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1e-34 Score=317.88 Aligned_cols=249 Identities=24% Similarity=0.291 Sum_probs=194.8
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
+.||+|+||.||+|+.. +++.||+|.+...........+.+|++++++++||||+++++++...+..++|+||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999764 68899999875443344456789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeee
Q 001275 904 RDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSIS 983 (1109)
Q Consensus 904 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 983 (1109)
.+++.... ..+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+|++|||++..............
T Consensus 81 ~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 155 (252)
T cd05084 81 LTFLRTEG--PRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGM 155 (252)
T ss_pred HHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCC
Confidence 99997533 34889999999999999999999 89999999999999999999999999999886543221111111
Q ss_pred cccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhh
Q 001275 984 VVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLV 1062 (1109)
Q Consensus 984 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 1062 (1109)
...+..|+|||.+.++.++.++||||+|+++|||++ |..||...... .....+.. . ... ..
T Consensus 156 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~~---~-~~~-~~----------- 217 (252)
T cd05084 156 KQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTREAIEQ---G-VRL-PC----------- 217 (252)
T ss_pred CCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHHHHHc---C-CCC-CC-----------
Confidence 233567999999998899999999999999999998 87777532211 11111100 0 000 00
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1063 SSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1063 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.......+.+++.+|++.+|++||++.|+.+.|.
T Consensus 218 --~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 --PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred --cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0111235677888999999999999999999886
No 97
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=8.1e-35 Score=325.38 Aligned_cols=259 Identities=25% Similarity=0.392 Sum_probs=203.4
Q ss_pred hCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
++|.+.+.||+|+||+||++.. .++..+|+|.+... .......+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 5688889999999999999964 23456889987432 2334567899999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCC----------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEE
Q 001275 893 IMYRYMENGSLRDVLHSITP----------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPH 962 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~----------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 962 (1109)
+||||+++++|.++++.... ...+++..++.++.|++.|++||| +.+++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEE
Confidence 99999999999999975431 234899999999999999999999 89999999999999999999999
Q ss_pred EecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHh
Q 001275 963 ISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSV 1041 (1109)
Q Consensus 963 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~ 1041 (1109)
|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||...... .. ....
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--~~---~~~i 235 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EV---IECI 235 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HH---HHHH
Confidence 999999986643322222222345778999999998899999999999999999998 88887543211 11 1111
Q ss_pred hcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1042 WSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1042 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
.... .... ......++.+++.+||+.+|.+||++.|+.+.|+++.
T Consensus 236 ~~~~--~~~~-------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 236 TQGR--VLQR-------------PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HcCC--cCCC-------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1100 0000 0112234777888999999999999999999998874
No 98
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1e-34 Score=322.99 Aligned_cols=263 Identities=24% Similarity=0.351 Sum_probs=204.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCc----EEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNA----VFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
++|+..++||+|+||+||+|++. +++ .||+|.+...........+.+|+.+++.++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 56888899999999999999753 444 4799988654444456678899999999999999999999875 45789
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
++||+++|+|.++++... ..+++..++.++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 86 ~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 86 VTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 999999999999997643 35889999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
............++..|+|||...+..++.++|||||||++|||++ |..||..... .....++... ....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~----~~~~--- 231 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKG----ERLP--- 231 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCC----CcCC---
Confidence 4322222222345678999999999999999999999999999998 8888754321 1122222110 0000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCCCCCCC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVPMTSKY 1108 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 1108 (1109)
.......++.+++.+||+.||++||++.|+++.+.+.... +.+|
T Consensus 232 -----------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~-~~~~ 275 (279)
T cd05109 232 -----------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD-PSRF 275 (279)
T ss_pred -----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC-CcCe
Confidence 0011223566788899999999999999999999888443 3444
No 99
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.4e-35 Score=323.37 Aligned_cols=259 Identities=23% Similarity=0.361 Sum_probs=201.9
Q ss_pred hhCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCce
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 891 (1109)
+++|...+.||+|+||.||+|... .+..||+|.+...........+.+|+.++++++|+||+++++++.+.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 467888999999999999999765 35778899875444444456789999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCC----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC---cEEEe
Q 001275 892 IIMYRYMENGSLRDVLHSITP----PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM---EPHIS 964 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~ 964 (1109)
++||||+++|+|.++++.... ...+++..+.+++.|++.|++||| +.+++||||||+||+++.++ .+|++
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEec
Confidence 999999999999999976532 235899999999999999999999 88999999999999998654 59999
Q ss_pred cccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhc
Q 001275 965 DFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWS 1043 (1109)
Q Consensus 965 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1109)
|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||...... .....+ ..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~---~~ 236 (277)
T cd05036 162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFV---TG 236 (277)
T ss_pred cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH---Hc
Confidence 9999987643322211112234568999999999999999999999999999997 88888643211 111111 11
Q ss_pred CccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1044 DTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1044 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. .. . . .......+.+++.+|++.+|++||++.||+++|..
T Consensus 237 ~~-~~----~------~----~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 237 GG-RL----D------P----PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred CC-cC----C------C----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 00 00 0 0 01112356778889999999999999999999863
No 100
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-34 Score=317.87 Aligned_cols=252 Identities=21% Similarity=0.303 Sum_probs=201.1
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|...+.||+|+||+||+|+..++..+|+|.+... ......+.+|++++++++||||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC--cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 457788899999999999998887778999987432 234567899999999999999999999999888999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.+++..... .+++..++.++.|++.|++||| +.+|+|+||||+||+++.++.+||+|||.++.......
T Consensus 82 ~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~- 155 (256)
T cd05113 82 SNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY- 155 (256)
T ss_pred CCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-
Confidence 99999999976432 5899999999999999999999 89999999999999999999999999999886543321
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||...+..++.++|||||||++|||++ |+.||..... ......+ ....... .
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~---~~~~~~~----~---- 222 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--SETVEKV---SQGLRLY----R---- 222 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHH---hcCCCCC----C----
Confidence 11222346678999999988889999999999999999999 8888854321 1111111 1110000 0
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.......+.+++.+||+.+|++||++.++++.++
T Consensus 223 -------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 223 -------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0011245677888999999999999999998874
No 101
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=9.3e-35 Score=323.60 Aligned_cols=262 Identities=19% Similarity=0.297 Sum_probs=206.9
Q ss_pred hhCCCCCceeecccCeEEEEEEeCC-----CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEec-CCce
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGP-----NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR-KDCG 891 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 891 (1109)
.++|...+.||+|+||.||+|.... +..||+|++...........+.+|+.++++++|+||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678889999999999999998765 788999988544444446678899999999999999999998776 4678
Q ss_pred eEEEEeccCCCHHHHHhccCCC-----CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecc
Q 001275 892 IIMYRYMENGSLRDVLHSITPP-----PTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDF 966 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 966 (1109)
++++||+++|+|.+++...... ..+++..++.++.|++.|++||| +.+++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999999764322 45899999999999999999999 899999999999999999999999999
Q ss_pred cCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCc
Q 001275 967 GIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 967 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
|+++.+.............++..|+|||++.+..++.++|||||||++||+++ |+.||..... .++..++.. .
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~----~ 235 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKD----G 235 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHc----C
Confidence 99986643322211222356778999999998889999999999999999999 9998864311 112221111 0
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
..... ......++.+++.+||+.||++||++.|+++.|.++..
T Consensus 236 ~~~~~--------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 236 YRLAQ--------------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCCC--------------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 00000 01112346778889999999999999999999998743
No 102
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.6e-34 Score=326.41 Aligned_cols=244 Identities=22% Similarity=0.320 Sum_probs=193.9
Q ss_pred ceeecccCeEEEEEEe----CCCcEEEEEEeeecc---cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 825 HVIGRGAHGIVYKASL----GPNAVFAVKKLAFRG---HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++||+|+||.||+++. ..++.||+|.+.... .......+.+|++++++++||||+++++++..++..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999965 357899999985432 223345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++|+|.+++.... .+.+..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999997643 3778888999999999999999 89999999999999999999999999999875432211
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .............+.
T Consensus 156 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~~~~~~~~~~~~~-------- 220 (323)
T cd05584 156 --VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKTIDKILKGKLNLP-------- 220 (323)
T ss_pred --cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCC--------
Confidence 12235799999999999998899999999999999999999999964321 111111111110000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQL 1097 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L 1097 (1109)
. ....++.+++.+|++.||++|| ++.++++|-
T Consensus 221 -----~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~ 257 (323)
T cd05584 221 -----P---YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHP 257 (323)
T ss_pred -----C---CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCC
Confidence 0 1123456678899999999999 899988864
No 103
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.3e-34 Score=335.52 Aligned_cols=260 Identities=23% Similarity=0.323 Sum_probs=202.2
Q ss_pred hCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 891 (1109)
++|.+.++||+|+||.||+|++. .++.||+|++...........+.+|++++.++. |||||+++++|...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 46778899999999999999753 346899999965443444457889999999997 99999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCC-----------------------------------------------------------
Q 001275 892 IIMYRYMENGSLRDVLHSITP----------------------------------------------------------- 912 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~----------------------------------------------------------- 912 (1109)
++|+||+++|+|.++++....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 999999999999999975321
Q ss_pred ------------------------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeC
Q 001275 913 ------------------------------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLD 956 (1109)
Q Consensus 913 ------------------------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~ 956 (1109)
...+++..+.+++.|+++|++||| +.+|+||||||+||+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEe
Confidence 124678888999999999999999 89999999999999999
Q ss_pred CCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHH
Q 001275 957 SEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIV 1035 (1109)
Q Consensus 957 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~ 1035 (1109)
+++.+|++|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||...... ....
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~-~~~~ 352 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN-EQFY 352 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch-HHHH
Confidence 999999999999986533222112223457889999999998889999999999999999998 88887532111 1111
Q ss_pred HHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1036 GWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.. ..... .. .. ......++.+++.+||+.+|++||+++|+++.|+++
T Consensus 353 ~~---~~~~~-~~---~~-----------p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 353 NA---IKRGY-RM---AK-----------PAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HH---HHcCC-CC---CC-----------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11 01000 00 00 011124567788899999999999999999999875
No 104
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.3e-34 Score=324.27 Aligned_cols=259 Identities=21% Similarity=0.334 Sum_probs=202.3
Q ss_pred CCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
+|++.+.||+|+||.||+|... ....+|+|.+..........++.+|+++++.++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999653 2356888877544333445678899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhccCC---------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCC
Q 001275 894 MYRYMENGSLRDVLHSITP---------------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPEN 952 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 952 (1109)
|+||+++|+|.+++..... ...+++..++.++.|++.|++||| +.+|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 9999999999999865321 134789999999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCcccc
Q 001275 953 ILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKER 1031 (1109)
Q Consensus 953 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~ 1031 (1109)
|++++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 9999999999999999986543322222223356778999999988889999999999999999999 8888854321
Q ss_pred ccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1032 TDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
..+..+....+. . . .......++.+++.+|++.+|++||+++|+++.|+++.
T Consensus 236 ~~~~~~~~~~~~----~------~--------~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 236 ERLFNLLKTGYR----M------E--------RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred HHHHHHHhCCCC----C------C--------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 112221111100 0 0 00112235677888999999999999999999998864
No 105
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=3.8e-34 Score=321.45 Aligned_cols=266 Identities=22% Similarity=0.319 Sum_probs=204.8
Q ss_pred hhCCCCCceeecccCeEEEEEEeCC-----------------CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceee
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGP-----------------NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVR 880 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 880 (1109)
..+|++.+.||+|+||.||+|.... +..||+|++...........+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578899999999999999986542 24589998865544455668899999999999999999
Q ss_pred EeeEEecCCceeEEEEeccCCCHHHHHhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCC
Q 001275 881 LEDFWLRKDCGIIMYRYMENGSLRDVLHSITP--------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPEN 952 (1109)
Q Consensus 881 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 952 (1109)
+++++..++..++|+||+++++|.+++..... ...+++..++.++.|++.|++||| +.+|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 99999999999999999999999999976431 125899999999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh--CCCCCCCCccc
Q 001275 953 ILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT--RKKALDPSYKE 1030 (1109)
Q Consensus 953 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~~~~~ 1030 (1109)
|+++.++.++++|||+++...............+++.|+|||+..+..++.++|||||||++|||++ +..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 9999999999999999986544332222233456789999999988889999999999999999998 566664321
Q ss_pred cccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1031 RTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
..+........+......... . .......++.+++.+|++.||++||++.|+++.|.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 239 DQQVIENAGHFFRDDGRQIYL-P----------RPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred hHHHHHHHHhccccccccccC-C----------CccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 111111111111110000000 0 011122457788999999999999999999998863
No 106
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.2e-34 Score=332.31 Aligned_cols=270 Identities=22% Similarity=0.325 Sum_probs=196.2
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-----cee
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-----CGI 892 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 892 (1109)
+|++.++||+|+||.||+|.. .+++.||||++.... .......+.+|++++++++||||+++++++...+ ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 477889999999999999975 468999999885432 2233456889999999999999999999886432 479
Q ss_pred EEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCccc
Q 001275 893 IMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLL 972 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 972 (1109)
+||||++ ++|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 9999996 68999887543 4899999999999999999999 899999999999999999999999999999865
Q ss_pred CCCCCC-ceeeecccCccccccccccc--CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc--cc
Q 001275 973 DKSPAS-TTSISVVGTIGYIAPENAFT--TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT--EE 1047 (1109)
Q Consensus 973 ~~~~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 1047 (1109)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+....... ..
T Consensus 154 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~ 231 (338)
T cd07859 154 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLLGTPSPET 231 (338)
T ss_pred ccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhCCCCHHH
Confidence 322211 12234579999999998865 67899999999999999999999998643211 1111111100000 00
Q ss_pred cccccchh---hhHHh-------hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1048 INDIVDLS---LMEEM-------LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1048 ~~~~~d~~---~~~~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
...+.... ..... .....+....++.+++.+|++.||++||+++|+++|-+
T Consensus 232 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~ 292 (338)
T cd07859 232 ISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPY 292 (338)
T ss_pred HHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCch
Confidence 00000000 00000 00001112245677888999999999999999998743
No 107
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.4e-35 Score=324.74 Aligned_cols=252 Identities=24% Similarity=0.366 Sum_probs=208.0
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCc-eeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC-GIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 895 (1109)
++|...+++|+|+||.++.++.+ ++..||+|.+..... ........+|+.++++++|||||.+.+.|..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 46888899999999999999654 577899999865543 3344478899999999999999999999999988 89999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
+|++||++.+.+...+ ...++++.+..++.|++.|+.||| +..|+|||||+.||+++.++.|||+|||+|+.+...
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999998755 456899999999999999999999 899999999999999999999999999999988765
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.. .....+||+.||.||.+.+.+|..|+||||+||++|||++-+++|... +....+.+..... +.
T Consensus 160 ~~--~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-----~m~~Li~ki~~~~------~~-- 224 (426)
T KOG0589|consen 160 DS--LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-----NMSELILKINRGL------YS-- 224 (426)
T ss_pred hh--hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCcc-----chHHHHHHHhhcc------CC--
Confidence 42 233478999999999999999999999999999999999999999654 2222222221111 01
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
+.......++..++..|++.+|+.||++.+++.+
T Consensus 225 -------Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 -------PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -------CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1112233445567779999999999999999987
No 108
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.4e-34 Score=328.42 Aligned_cols=255 Identities=23% Similarity=0.260 Sum_probs=197.1
Q ss_pred CCCCCceeecccCeEEEEEEe----CCCcEEEEEEeeecc---cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCce
Q 001275 820 NLNAKHVIGRGAHGIVYKASL----GPNAVFAVKKLAFRG---HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 891 (1109)
+|++.+.||+|+||+||+++. .+++.||+|++.... .......+.+|++++.++ +|++|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999865 367899999985432 122345678899999999 599999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++||||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999987643 4889999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 972 LDKSPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 972 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
....... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .................
T Consensus 155 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~-- 230 (332)
T cd05614 155 FLSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-NTQSEVSRRILKCDPPF-- 230 (332)
T ss_pred ccccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-CCHHHHHHHHhcCCCCC--
Confidence 5332221 22245799999999998765 4789999999999999999999999643211 11111111111100000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQLV 1098 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~ 1098 (1109)
.. .....+.+++.+|++.||++|| +++|+++|-+
T Consensus 231 -----------~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~ 269 (332)
T cd05614 231 -----------PS---FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPF 269 (332)
T ss_pred -----------CC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCC
Confidence 00 1123355677799999999999 7889988743
No 109
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.9e-34 Score=316.48 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=199.6
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
.+|+..+.||+|+||.||+|...++..+|+|.+... ......+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREG--AMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYM 81 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccC--CCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecC
Confidence 347788899999999999998887888999987422 233457889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.++++... ..+++..+..++.|+++|++||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~- 155 (256)
T cd05059 82 ANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY- 155 (256)
T ss_pred CCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccc-
Confidence 9999999997643 25899999999999999999999 89999999999999999999999999999986543221
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||.+.+..++.++||||||+++||+++ |+.||..... .+.. ....... ..
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~---~~~~~~~----~~------ 220 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEVV---ESVSAGY----RL------ 220 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHHH---HHHHcCC----cC------
Confidence 11112234568999999998999999999999999999999 7888854321 1111 1111000 00
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
........++.+++.+||+.+|++||++.|+++.|.
T Consensus 221 -----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 221 -----YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred -----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 000112345777888999999999999999999873
No 110
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.2e-34 Score=319.07 Aligned_cols=257 Identities=23% Similarity=0.360 Sum_probs=206.2
Q ss_pred HhhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+..+|...++||+|+||+||+|...+++.+|+|.+... .......+.+|+++++.++|+||+++++++...+..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD-DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc-chhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34568889999999999999999888999999988433 23345678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|+|.++++... ...+++..+..++.|+++|++||| +.+|+||||||+||++++++.+||+|||.+.......
T Consensus 83 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~ 158 (261)
T cd05148 83 LMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV 158 (261)
T ss_pred ecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence 999999999997643 345899999999999999999999 8999999999999999999999999999998664322
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.. .....++..|+|||...+..++.++||||||+++|+|++ |+.||..... ........ .... .
T Consensus 159 ~~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~--~~~~~~~~---~~~~-~------- 223 (261)
T cd05148 159 YL--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN--HEVYDQIT---AGYR-M------- 223 (261)
T ss_pred cc--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHH---hCCc-C-------
Confidence 11 113456778999999988899999999999999999998 7888854321 11111111 1000 0
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.........+.+++.+|++.||++||+++|+++.|+.+
T Consensus 224 -------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 224 -------PCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred -------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 00112234567788899999999999999999999753
No 111
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.8e-34 Score=322.57 Aligned_cols=262 Identities=21% Similarity=0.343 Sum_probs=203.6
Q ss_pred HhhCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCc
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 890 (1109)
.+++|++.++||+|+||.||+|... .+..||+|.+...........+.+|+.++++++|+||+++++++...+.
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999643 2457999987544333344568899999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHHhccCC-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEE
Q 001275 891 GIIMYRYMENGSLRDVLHSITP-------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHI 963 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 963 (1109)
.++||||+++|+|.++++.... ....++..+.+++.|++.|++||| +++|+||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999975321 234577888999999999999999 899999999999999999999999
Q ss_pred ecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhh
Q 001275 964 SDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVW 1042 (1109)
Q Consensus 964 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 1042 (1109)
+|||+++...............++..|+|||...+..++.++|||||||++|||++ |+.||..... .+... ...
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~--~~~~~---~~~ 235 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN--EQVLK---FVM 235 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHH---HHH
Confidence 99999986543322222222345778999999998899999999999999999999 6777754221 11111 111
Q ss_pred cCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1043 SDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1043 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
... .. . ........+.+++.+|++.||++||++.|+++.+.+..
T Consensus 236 ~~~-~~-~-------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 DGG-YL-D-------------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred cCC-CC-C-------------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 000 00 0 00111245777888999999999999999999998753
No 112
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-34 Score=325.60 Aligned_cols=261 Identities=21% Similarity=0.349 Sum_probs=204.9
Q ss_pred hhCCCCCceeecccCeEEEEEEe--------CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecC
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL--------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRK 888 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 888 (1109)
.++|.+.+.||+|+||.||+|+. .++..||+|.+..........++.+|+.+++.+ +||||+++++++...
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 93 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 93 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecC
Confidence 36788889999999999999964 134578999875443344556789999999999 899999999999999
Q ss_pred CceeEEEEeccCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeee
Q 001275 889 DCGIIMYRYMENGSLRDVLHSITP-------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILL 955 (1109)
Q Consensus 889 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll 955 (1109)
+..++||||+++|+|.+++..... ...+++..+..++.|+++|++||| +.+|+||||||+||++
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili 170 (304)
T cd05101 94 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLV 170 (304)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEE
Confidence 999999999999999999976432 235788999999999999999999 8999999999999999
Q ss_pred CCCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccH
Q 001275 956 DSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDI 1034 (1109)
Q Consensus 956 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~ 1034 (1109)
++++.+||+|||.++...............+++.|+|||++.+..++.++||||||+++||+++ |..||.... .
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~ 245 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V 245 (304)
T ss_pred cCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----H
Confidence 9999999999999987654332222223456778999999998889999999999999999998 677764321 1
Q ss_pred HHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1035 VGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1035 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
..+......... . . . ......++.+++.+||+.+|++||++.|+++.|.++.
T Consensus 246 ~~~~~~~~~~~~-~-~--~-----------~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 246 EELFKLLKEGHR-M-D--K-----------PANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHHHHHHcCCc-C-C--C-----------CCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 122221111100 0 0 0 0122345667888999999999999999999998863
No 113
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-34 Score=344.70 Aligned_cols=253 Identities=21% Similarity=0.257 Sum_probs=199.5
Q ss_pred CCCCCceeecccCeEEEEEEeC-C-CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-P-NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.|...+.||+|+||.||+|... + ++.||+|.+... .......+.+|+++++.++|||||++++++...+..++||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN-DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEEC
Confidence 3788899999999999999654 3 577888876332 333345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSI-TPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
+++|+|.++++.. .....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 147 ~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 147 GSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 9999999988643 22345889999999999999999999 8999999999999999999999999999998765432
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
.........||++|+|||++.+..++.++||||+||++|||++|+.||..... ........... . ++
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~~--~----~~-- 290 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGK--Y----DP-- 290 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC--C----CC--
Confidence 22223345799999999999999999999999999999999999999864321 11111111100 0 00
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. ......++.+++.+|++.||++||+++|++++
T Consensus 291 ----~---~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 291 ----F---PCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred ----C---CccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 0 00112346678889999999999999998764
No 114
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.1e-34 Score=323.68 Aligned_cols=257 Identities=22% Similarity=0.279 Sum_probs=199.8
Q ss_pred CCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
+|+..+.||+|+||+||+|... .+..||+|++...........+.+|+.++.+++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4566788999999999999753 3578999998644333334568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhccC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc
Q 001275 894 MYRYMENGSLRDVLHSIT-------------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME 960 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 960 (1109)
++||+++++|.+++.... ....+++..+.+++.|+++|++|+| +.+|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCc
Confidence 999999999999985321 1234788899999999999999999 899999999999999999999
Q ss_pred EEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHH
Q 001275 961 PHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVR 1039 (1109)
Q Consensus 961 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 1039 (1109)
+||+|||+++...............+++.|+|||.+.+..++.++||||+||++|||++ |..||..... ..+..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVIE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Confidence 99999999886643332222223456789999999988899999999999999999998 7777754311 11111
Q ss_pred HhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1040 SVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
....... ... .......+.+++.+||+.+|++||+++|+++.|+.
T Consensus 238 ~i~~~~~--~~~-------------~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQV--LPC-------------PDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCc--CCC-------------CCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 1111100 000 01223446678889999999999999999999864
No 115
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=4.5e-34 Score=315.70 Aligned_cols=260 Identities=19% Similarity=0.313 Sum_probs=205.6
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|.+.++||+|+||.||+|+. .+++.||||.+.... .......+.+|++++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4788899999999999999976 468999999875422 2233456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 896 RYMENGSLRDVLHSITP-PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
||+++|+|.+++..... ...+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998864322 335788999999999999999999 89999999999999999999999999999886643
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
... ......+++.|+|||...+..++.++||||+|+++|||++|+.||....... ..+........ .+
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~---~~~~~~~~~~~-------~~ 226 (267)
T cd08228 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL---FSLCQKIEQCD-------YP 226 (267)
T ss_pred hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH---HHHHHHHhcCC-------CC
Confidence 221 1123468889999999988889999999999999999999999986432221 11211111000 00
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
... ......++.+++.+||+.+|++||++.|+++.+...
T Consensus 227 ~~~-------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 227 PLP-------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CCC-------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 000 112234567788899999999999999999999875
No 116
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-35 Score=320.89 Aligned_cols=256 Identities=23% Similarity=0.350 Sum_probs=207.7
Q ss_pred hhCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
..+.....+||-|.||.||.|.|+. .-.||||.++ .+.....+|.+|+.+|+.++|||+|+++|+|..+..+|+|+|
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK--EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTE 343 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITE 343 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhh--hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEe
Confidence 3455667899999999999998864 5678999874 345567899999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
||.+|+|.+|+++... ..++.-..+.+|.||+.|++||. ++++|||||.++|+|+.++..+||+|||+++.+..+.
T Consensus 344 fM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT 419 (1157)
T KOG4278|consen 344 FMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT 419 (1157)
T ss_pred cccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc
Confidence 9999999999998653 34677788899999999999999 9999999999999999999999999999999886543
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCC-CCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRK-KALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.+...+..-++.|.|||.+....++.|+|||+|||++||+.|.. .|| +.. +..++.+.+.. .
T Consensus 420 -YTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPY-PGi-dlSqVY~LLEk--------------g 482 (1157)
T KOG4278|consen 420 -YTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPY-PGI-DLSQVYGLLEK--------------G 482 (1157)
T ss_pred -eecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCC-CCc-cHHHHHHHHhc--------------c
Confidence 33334455678999999999999999999999999999999954 444 321 11111111111 1
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.. .+...-+.+.++++++.||++.|.+||+++|+-+.++..
T Consensus 483 yR----M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 483 YR----MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred cc----ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 00 111234567788999999999999999999999888754
No 117
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.6e-34 Score=334.04 Aligned_cols=256 Identities=22% Similarity=0.331 Sum_probs=194.5
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
.|...+.||+|+||+||+|.. .+++.||+|++.... .......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 577889999999999999965 467899999985432 22334578899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999997643 4788899999999999999999 8999999999999999999999999999986432110
Q ss_pred CC---------------------------------------------ceeeecccCcccccccccccCCCCccCcchhhH
Q 001275 977 AS---------------------------------------------TTSISVVGTIGYIAPENAFTTAKSKESDVYSYG 1011 (1109)
Q Consensus 977 ~~---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG 1011 (1109)
.. .......||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 00 001234799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHh--ccCCCCCCCCC
Q 001275 1012 VVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALR--CTEKKPSNRPN 1089 (1109)
Q Consensus 1012 vil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP~~RPs 1089 (1109)
|++|||++|+.||........ ..... .+........ ...... ++.+++.+ |+..+|..||+
T Consensus 236 ~il~elltG~~Pf~~~~~~~~-~~~i~--~~~~~~~~~~-----------~~~~s~---~~~dli~~ll~~~~~~~~R~~ 298 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTET-QLKVI--NWENTLHIPP-----------QVKLSP---EAVDLITKLCCSAEERLGRNG 298 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHH-HHHHH--ccccccCCCC-----------CCCCCH---HHHHHHHHHccCcccccCCCC
Confidence 999999999999965422111 11000 0000000000 000112 23344445 55667777999
Q ss_pred HHHHHHHhh
Q 001275 1090 MRDVVRQLV 1098 (1109)
Q Consensus 1090 ~~evl~~L~ 1098 (1109)
++|+++|-.
T Consensus 299 ~~~~l~hp~ 307 (381)
T cd05626 299 ADDIKAHPF 307 (381)
T ss_pred HHHHhcCcc
Confidence 999999853
No 118
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1e-34 Score=345.90 Aligned_cols=258 Identities=24% Similarity=0.327 Sum_probs=202.8
Q ss_pred HHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC----
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD---- 889 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 889 (1109)
...++|.+.++||+|+||+||+|.. .+++.||||++.... .......+.+|+.++..++|+|++++.+.+...+
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 3446899999999999999999965 568999999985443 2333456889999999999999999988765433
Q ss_pred ----ceeEEEEeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEe
Q 001275 890 ----CGIIMYRYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHIS 964 (1109)
Q Consensus 890 ----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~ 964 (1109)
..++||||+++|+|.++++... ....+++..+..++.|++.||+|+| +.+|+||||||+||+++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEE
Confidence 2579999999999999997532 2346889999999999999999999 8999999999999999999999999
Q ss_pred cccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC
Q 001275 965 DFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD 1044 (1109)
Q Consensus 965 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+......
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~~~~~~ 260 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMHKTLAG 260 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHhcC
Confidence 9999987644322222334679999999999999999999999999999999999999996431 11122111111
Q ss_pred ccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1045 TEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1045 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. . ++ .. .....++.+++.+||+.||++||++.|++++
T Consensus 261 ~--~----~~------~~---~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 261 R--Y----DP------LP---PSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred C--C----CC------CC---CCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 0 0 00 00 1122346678889999999999999999876
No 119
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=6.1e-34 Score=319.64 Aligned_cols=265 Identities=22% Similarity=0.333 Sum_probs=201.2
Q ss_pred hCCCCCceeecccCeEEEEEEeC-----------------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-----------------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRL 881 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 881 (1109)
++|++.++||+|+||.||++... ++..||+|++..........++.+|++++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888999999999999998532 2346899988544444445678999999999999999999
Q ss_pred eeEEecCCceeEEEEeccCCCHHHHHhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCe
Q 001275 882 EDFWLRKDCGIIMYRYMENGSLRDVLHSITP--------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENI 953 (1109)
Q Consensus 882 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NI 953 (1109)
++++...+..++||||+++|+|.+++..... ...+++..+..++.|++.|++||| +.+|+||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence 9999999999999999999999999976432 124778899999999999999999 88999999999999
Q ss_pred eeCCCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh--CCCCCCCCcccc
Q 001275 954 LLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT--RKKALDPSYKER 1031 (1109)
Q Consensus 954 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt--g~~p~~~~~~~~ 1031 (1109)
+++.++.++++|||+++.+.............++..|+|||...++.++.++|||||||++|||++ |..||.....
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~-- 239 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD-- 239 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh--
Confidence 999999999999999986643322221222345678999999888899999999999999999998 6677643211
Q ss_pred ccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1032 TDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
................. .. . .........+.+++.+||+.||++||++.|+++.|.+
T Consensus 240 ~~~~~~~~~~~~~~~~~-~~-~---------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 240 EQVIENTGEFFRDQGRQ-VY-L---------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred HHHHHHHHHHHhhcccc-cc-C---------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111111000000 00 0 0011122456778889999999999999999998863
No 120
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.1e-34 Score=316.21 Aligned_cols=255 Identities=23% Similarity=0.307 Sum_probs=201.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|...++||+|+||.||+|... .++.||+|.+.. ......++.+|++++++++|+||+++++++...+..++||||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecC--CchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 35777889999999999999664 588899998743 233456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++.... ...+++..++.++.|+++|++||| +.+++||||||+||++++++.+||+|||++........
T Consensus 84 ~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 84 MTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 99999999997643 345899999999999999999999 89999999999999999999999999999987643321
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
.......++..|+|||.+.+..++.++|||||||++|||++ |..||..... . .......... ...
T Consensus 160 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~---~~~~~~~~~~-------~~~- 225 (263)
T cd05052 160 -TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--S---QVYELLEKGY-------RME- 225 (263)
T ss_pred -eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--H---HHHHHHHCCC-------CCC-
Confidence 11112334678999999999999999999999999999998 8888754311 1 1111111000 000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......++.+++.+|++.+|++||++.|+++.|+.+
T Consensus 226 -------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 226 -------RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -------CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0011124466788899999999999999999999865
No 121
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.1e-34 Score=322.22 Aligned_cols=259 Identities=26% Similarity=0.383 Sum_probs=202.8
Q ss_pred hhCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCce
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 891 (1109)
..+|+..+.||+|+||.||+|... +++.||+|.+..........++.+|++++++++||||+++++++..++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 357888999999999999999753 46889999885444444456789999999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCC
Q 001275 892 IIMYRYMENGSLRDVLHSIT-------------------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPEN 952 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 952 (1109)
++|+||+++|+|.+++.... ....+++..++.++.|++.||+||| ..+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 99999999999999997432 1234788899999999999999999 8999999999999
Q ss_pred eeeCCCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCcccc
Q 001275 953 ILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKER 1031 (1109)
Q Consensus 953 Ill~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~ 1031 (1109)
|++++++.++++|||+++.+..............+..|+|||.+.+..++.++|||||||++|||++ |..||......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~- 239 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE- 239 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-
Confidence 9999999999999999876543322222222345678999999998899999999999999999998 77787543211
Q ss_pred ccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1032 TDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
........ .. ... .......++.+++.+|++.+|++||++.|+++.|++
T Consensus 240 ----~~~~~~~~-~~-~~~-------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 ----EVIYYVRD-GN-VLS-------------CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ----HHHHHHhc-CC-CCC-------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111110 00 000 001123457778889999999999999999999874
No 122
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.3e-34 Score=327.28 Aligned_cols=245 Identities=22% Similarity=0.262 Sum_probs=194.2
Q ss_pred ceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 825 HVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
+.||+|+||.||++.. .+++.||+|.+.... .......+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999965 468999999985432 2223456778999999999999999999999999999999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 902 SLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 902 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
+|.+++.... .+++..+..++.|++.||+||| + .+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 152 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--AT 152 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--cc
Confidence 9999887543 4889999999999999999999 6 799999999999999999999999999987543221 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~-----~~~~~i~~~~~~~p----------- 216 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMEEIRFP----------- 216 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH-----HHHHHHhcCCCCCC-----------
Confidence 22357999999999999999999999999999999999999999643211 11111111110000
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQLV 1098 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~ 1098 (1109)
. ....++.+++.+|++.||++|+ +++|+++|-+
T Consensus 217 --~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~ 254 (325)
T cd05594 217 --R---TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKF 254 (325)
T ss_pred --C---CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCC
Confidence 0 1123455677899999999996 8999998743
No 123
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.1e-34 Score=320.24 Aligned_cols=258 Identities=22% Similarity=0.357 Sum_probs=203.1
Q ss_pred hCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
++|.+.+.||+|+||.||+|... .+..||+|.+...........+.+|+++++.++|+||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 57888899999999999999664 246899998754433344567889999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCC-------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEec
Q 001275 893 IMYRYMENGSLRDVLHSITP-------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISD 965 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 965 (1109)
+||||+++|+|.+++..... ...+++..++.++.|++.|++||| +.+|+||||||+||++++++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEECC
Confidence 99999999999999975432 224789999999999999999999 89999999999999999999999999
Q ss_pred ccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcC
Q 001275 966 FGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSD 1044 (1109)
Q Consensus 966 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
||+++...............++..|+|||.+.+..++.++|||||||++||+++ |+.||..... ........ .
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~~----~ 236 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVLKFVI----D 236 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHHHHHh----c
Confidence 999986544322222223456789999999988889999999999999999998 8888753211 11111111 0
Q ss_pred ccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1045 TEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1045 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. .... ......++.+++.+||+.+|++|||+.|+++.|++
T Consensus 237 ~~-~~~~-------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 237 GG-HLDL-------------PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CC-CCCC-------------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 00 0000 01113456778889999999999999999998863
No 124
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.7e-34 Score=332.50 Aligned_cols=256 Identities=23% Similarity=0.297 Sum_probs=202.6
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|.+.+.||+|+||+||+|+.. +++.||+|++..... ......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999765 689999999864322 234457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999765 34889999999999999999999 899999999999999999999999999999866443
Q ss_pred C---------------------------CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCc
Q 001275 976 P---------------------------ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSY 1028 (1109)
Q Consensus 976 ~---------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~ 1028 (1109)
. .........||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 0011223579999999999999999999999999999999999999996542
Q ss_pred cccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHHhh
Q 001275 1029 KERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN-MRDVVRQLV 1098 (1109)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~L~ 1098 (1109)
.. .............. -+ .......++.+++.+|++ ||++||+ ++|+++|-.
T Consensus 235 ~~-----~~~~~i~~~~~~~~---~p---------~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~ 287 (350)
T cd05573 235 LQ-----ETYNKIINWKESLR---FP---------PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPF 287 (350)
T ss_pred HH-----HHHHHHhccCCccc---CC---------CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCC
Confidence 11 11111111000000 00 000022345667779997 9999999 999999854
No 125
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.1e-34 Score=325.22 Aligned_cols=260 Identities=22% Similarity=0.356 Sum_probs=202.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC--------CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCC
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG--------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKD 889 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 889 (1109)
++|.+.+.||+|+||.||+|... ....+|+|.+..........++.+|+++++++ +|+||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 57889999999999999999652 23569999885443344456788899999999 7999999999999999
Q ss_pred ceeEEEEeccCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITP-------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLD 956 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~ 956 (1109)
..++||||+++|+|.+++..... ...+++..+++++.|++.|++||| +.+++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEc
Confidence 99999999999999999976432 135889999999999999999999 89999999999999999
Q ss_pred CCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHH
Q 001275 957 SEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIV 1035 (1109)
Q Consensus 957 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~ 1035 (1109)
.++.+||+|||.++...............++..|+|||++.+..++.++||||+||++|||++ |+.||.... ..+..
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~--~~~~~ 252 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--VEELF 252 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC--HHHHH
Confidence 999999999999986543221111122234578999999998889999999999999999998 777774321 11111
Q ss_pred HHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1036 GWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
..+.. . ... + .......++.+++.+|++.+|++||++.|+++.|.++.
T Consensus 253 ~~~~~---~-~~~-~-------------~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 253 KLLKE---G-HRM-D-------------KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred HHHHc---C-CCC-C-------------CCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 11111 0 000 0 01112345667888999999999999999999998863
No 126
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.4e-34 Score=320.74 Aligned_cols=268 Identities=24% Similarity=0.350 Sum_probs=199.8
Q ss_pred CCCCceeecccCeEEEEEEe-----CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecC--CceeE
Q 001275 821 LNAKHVIGRGAHGIVYKASL-----GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGII 893 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 893 (1109)
|...+.||+|+||+||++.. .+++.||+|.+...........+.+|++++++++||||+++++++... ...++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 47889999999999988642 467889999885443334456788999999999999999999988654 35789
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
||||+++|+|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||+++...
T Consensus 86 v~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence 99999999999999753 3899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCCce-eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 974 KSPASTT-SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 974 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
....... .....++..|+|||...+..++.++||||||+++|||++|+.|+........+......... ......+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 237 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQM-TVVRLIELL 237 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccccc-chhhhhhhh
Confidence 4322111 11234566799999998888999999999999999999999997543221111110000000 000000000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+... ..+.......++.+++.+||+.+|++||+++++++.|+++
T Consensus 238 ~~~~----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 238 ERGM----RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hcCC----CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 0000 0000112234677788899999999999999999999876
No 127
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-34 Score=325.55 Aligned_cols=261 Identities=21% Similarity=0.366 Sum_probs=202.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC--------CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCC
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG--------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKD 889 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 889 (1109)
++|.+.++||+|+||.||+|+.. ....||+|.+..........++.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 57888999999999999999642 34578999875443444456788999999999 6999999999999988
Q ss_pred ceeEEEEeccCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITP-------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLD 956 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~ 956 (1109)
..++|+||+++|+|.+++..... ...+++..+.+++.|++.|++||| +.+|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEc
Confidence 99999999999999999976321 235889999999999999999999 89999999999999999
Q ss_pred CCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHH
Q 001275 957 SEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIV 1035 (1109)
Q Consensus 957 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~ 1035 (1109)
+++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~ 246 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--EELF 246 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--HHHH
Confidence 999999999999986643222111112234567999999998899999999999999999999 7888753211 1111
Q ss_pred HHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1036 GWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
..... . ... .. ......++.+++.+|++.+|++||++.|+++.|.++..
T Consensus 247 ~~~~~---~-~~~-~~-------------~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 247 KLLRE---G-HRM-DK-------------PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHHHc---C-CCC-CC-------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11111 0 000 00 01122356678889999999999999999999987643
No 128
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.9e-34 Score=316.50 Aligned_cols=257 Identities=20% Similarity=0.337 Sum_probs=198.9
Q ss_pred CCCCceeecccCeEEEEEEeCC----CcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCc-----
Q 001275 821 LNAKHVIGRGAHGIVYKASLGP----NAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC----- 890 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 890 (1109)
|.+.+.||+|+||.||+|.... +..||+|++..... ......+.+|++.++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567889999999999997642 36799998854322 2234578899999999999999999998876554
Q ss_pred -eeEEEEeccCCCHHHHHhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecc
Q 001275 891 -GIIMYRYMENGSLRDVLHSIT---PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDF 966 (1109)
Q Consensus 891 -~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 966 (1109)
.++|+||+++|+|.+++.... ....+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 699999999999999985532 2346899999999999999999999 899999999999999999999999999
Q ss_pred cCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCc
Q 001275 967 GIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 967 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
|+++...............++..|+|||+..+..++.++|||||||++|||++ |..||..... ..... ......
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~---~~~~~~ 232 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYD---YLRHGN 232 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHH---HHHcCC
Confidence 99987654332222222345678999999988889999999999999999999 7787753221 11111 111110
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.. . .......++.+++.+|++.||++||++.|++++|+++
T Consensus 233 -~~-~-------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 -RL-K-------------QPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -CC-C-------------CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00 0 0011234577788899999999999999999999875
No 129
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5.4e-34 Score=318.03 Aligned_cols=255 Identities=25% Similarity=0.316 Sum_probs=200.1
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+|+..++||+|+||+||++... +++.||+|++..... ......+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999764 689999999854322 2223457789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|+|.+++.... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 999999999886532 245899999999999999999999 8999999999999999999999999999998654322
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
. .....|+..|+|||++.+..++.++||||+||++|||++|+.||...... ...............
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~---------- 222 (285)
T cd05605 157 T---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVERRVKEDQE---------- 222 (285)
T ss_pred c---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHHHhhhccc----------
Confidence 1 12347899999999999889999999999999999999999999643211 111111000000000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQLV 1098 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~ 1098 (1109)
.........+.+++.+||+.||++|| +++++++|-+
T Consensus 223 ------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~ 263 (285)
T cd05605 223 ------EYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPF 263 (285)
T ss_pred ------ccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcC
Confidence 00011233466788899999999999 8999988743
No 130
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.7e-34 Score=317.31 Aligned_cols=257 Identities=21% Similarity=0.339 Sum_probs=195.5
Q ss_pred CCCCceeecccCeEEEEEEeCCC-c--EEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecC------Cc
Q 001275 821 LNAKHVIGRGAHGIVYKASLGPN-A--VFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK------DC 890 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~~-~--~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 890 (1109)
|.+.++||+|+||.||+|..... . .||+|.+.... .......+.+|++++++++|+||+++++++... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 34678899999999999977543 2 58999875432 233356788999999999999999999987532 24
Q ss_pred eeEEEEeccCCCHHHHHhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 891 GIIMYRYMENGSLRDVLHSIT---PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
.++|+||+++|+|.+++.... ....+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCC
Confidence 689999999999999874321 2345899999999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcc
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTE 1046 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
+++...............+++.|+|||+..+..++.++||||||+++|||++ |+.||.... .......+ .. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~---~~-~~ 231 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--NSEIYDYL---RQ-GN 231 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHH---Hc-CC
Confidence 9987644332212222356778999999999999999999999999999999 778875321 11111111 11 00
Q ss_pred ccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1047 EINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1047 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
... . .......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 232 ~~~---~-----------~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 232 RLK---Q-----------PPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC---C-----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 000 0 011223466788899999999999999999999875
No 131
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.4e-34 Score=322.58 Aligned_cols=243 Identities=24% Similarity=0.308 Sum_probs=188.4
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||+||+|+.. +++.||+|.+.... .......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 57889999986432 222334556677776654 899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~ 152 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GK 152 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cc
Confidence 99999987643 4888999999999999999999 8999999999999999999999999999997543222 22
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...............
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~~~~~~~----------- 216 (316)
T cd05592 153 ASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSILNDRPHFP----------- 216 (316)
T ss_pred cccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCCCCCC-----------
Confidence 2345799999999999999999999999999999999999999964321 111111111110000
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMR-DVVRQ 1096 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~~ 1096 (1109)
... ..++.+++.+||+.||++||++. ++++|
T Consensus 217 --~~~---~~~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 217 --RWI---SKEAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred --CCC---CHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 011 22345677799999999999875 56554
No 132
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.3e-34 Score=329.65 Aligned_cols=260 Identities=23% Similarity=0.339 Sum_probs=199.7
Q ss_pred hCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecC-Cc
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRK-DC 890 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~-~~ 890 (1109)
++|++.+.||+|+||+||+|.. .+++.||||++...........+.+|+.++.++ +|+||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5789999999999999999963 356889999986544344456788999999999 689999999988654 45
Q ss_pred eeEEEEeccCCCHHHHHhccCC----------------------------------------------------------
Q 001275 891 GIIMYRYMENGSLRDVLHSITP---------------------------------------------------------- 912 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 912 (1109)
.++||||+++|+|.++++....
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 7899999999999999865321
Q ss_pred ------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeeccc
Q 001275 913 ------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVG 986 (1109)
Q Consensus 913 ------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~g 986 (1109)
...+++..+.+++.|+++|++||| +.+|+||||||+||++++++.+||+|||++................+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 123688889999999999999999 89999999999999999999999999999986533222122222345
Q ss_pred CcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchh
Q 001275 987 TIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSI 1065 (1109)
Q Consensus 987 t~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 1065 (1109)
+..|+|||...+..++.++||||||+++|||++ |..||...... ..... ... ..... . .+
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~---~~~-~~~~~-~--~~----------- 304 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCR---RLK-EGTRM-R--AP----------- 304 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HHHHH---HHh-ccCCC-C--CC-----------
Confidence 678999999988899999999999999999997 88887542211 11111 110 00000 0 00
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1066 RDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1066 ~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.....++.+++.+||+.+|++||++.|++++|+.+
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 00123467788899999999999999999999876
No 133
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=6.9e-34 Score=314.59 Aligned_cols=255 Identities=22% Similarity=0.268 Sum_probs=190.1
Q ss_pred ceeecccCeEEEEEEeCC---CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 825 HVIGRGAHGIVYKASLGP---NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
+.||+|+||.||+|...+ +..+|+|++...........+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999997643 45789998755444444557889999999999999999999999989999999999999
Q ss_pred CHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 902 SLRDVLHSITP--PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 902 sL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+|.++++.... ....++..+..++.|+++|++||| +.+++||||||+||+++.++.+|++|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999976432 234677888899999999999999 8999999999999999999999999999997554332222
Q ss_pred eeeecccCcccccccccccC-------CCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccc
Q 001275 980 TSISVVGTIGYIAPENAFTT-------AKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDI 1051 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~-------~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
......++..|+|||++.+. .++.++||||||+++|||++ |+.||......+ ..... ... .....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~~~~~---~~~--~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--VLTYT---VRE--QQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--HHHHH---hhc--ccCCC
Confidence 22334678899999987642 35789999999999999996 999985432211 11110 000 00011
Q ss_pred cchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1052 VDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1052 ~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.++... ... ...+.+++..|+ .+|++||+++|+++.|+
T Consensus 231 ~~~~~~-----~~~---~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLK-----LPL---SDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccC-----CCC---ChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111110 001 123455777898 68999999999998875
No 134
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.1e-34 Score=319.28 Aligned_cols=257 Identities=24% Similarity=0.389 Sum_probs=200.1
Q ss_pred hCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
++|...++||+|+||.||+|.. .++..+|+|.+.. ........+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCc-CCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 4677889999999999999953 2456788888743 33344567999999999999999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc
Q 001275 893 IMYRYMENGSLRDVLHSITP------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME 960 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 960 (1109)
+|+||+++|+|.++++.... ...+++..++.++.|++.|++||| +.+|+||||||+||++++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCC
Confidence 99999999999999976432 134789999999999999999999 899999999999999999999
Q ss_pred EEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHH
Q 001275 961 PHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVR 1039 (1109)
Q Consensus 961 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 1039 (1109)
+||+|||+++...............+++.|+|||...+..++.++|||||||++|||++ |+.||...... +...
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~--- 235 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT--EAIE--- 235 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH--HHHH---
Confidence 99999999976543222111222345788999999999999999999999999999998 88887532211 1111
Q ss_pred HhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1040 SVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
..... ... . . .......+.+++.+||+.||.+||+++|+.+.|+.
T Consensus 236 ~~~~~-~~~-~--~-----------~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 236 CITQG-REL-E--R-----------PRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHcC-ccC-C--C-----------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 11000 000 0 0 01122346678889999999999999999998863
No 135
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-34 Score=322.19 Aligned_cols=256 Identities=25% Similarity=0.336 Sum_probs=207.4
Q ss_pred hhCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeeccccc--ChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKR--GSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 893 (1109)
...|...+.||+|.||.||++.... |+.+|+|.+....... ....+.+|+++|+++. |||||.+.+++...+..++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 3567888999999999999997654 9999999996654432 3468999999999998 9999999999999999999
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC----CcEEEecccCC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE----MEPHISDFGIA 969 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~kl~DfGla 969 (1109)
|||++.||.|.+.+... .+++..+..++.|++.|++||| +.+|||||+||+|+|+... +.+|++|||++
T Consensus 114 vmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 99999999999999775 2899999999999999999999 8999999999999999543 47999999999
Q ss_pred cccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN 1049 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1109)
..... .......+||+.|+|||++....|+.++||||+||++|.|++|..||........ ........+
T Consensus 187 ~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-~~~i~~~~~------- 255 (382)
T KOG0032|consen 187 KFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-FLAILRGDF------- 255 (382)
T ss_pred eEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-HHHHHcCCC-------
Confidence 98765 3344567999999999999999999999999999999999999999976532211 111111111
Q ss_pred cccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1050 DIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1050 ~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
++-+ .......+. ..+++..|+..||.+|+++.++++|-|-.
T Consensus 256 ~f~~------~~w~~is~~---akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 256 DFTS------EPWDDISES---AKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred CCCC------CCccccCHH---HHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 0100 011112233 44466699999999999999999997644
No 136
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.6e-34 Score=323.33 Aligned_cols=248 Identities=22% Similarity=0.290 Sum_probs=193.1
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||.||+|+.. +++.||+|.+.... .......+.+|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999764 68899999986432 223345678899999998 799999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~ 152 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DT 152 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--Cc
Confidence 99999886543 4899999999999999999999 8999999999999999999999999999987432211 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccc---cccHHHHHHHhh-cCccccccccchhh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKE---RTDIVGWVRSVW-SDTEEINDIVDLSL 1056 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~d~~~ 1056 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||+..... ......+..... ......
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 224 (329)
T cd05588 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRI-------- 224 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCC--------
Confidence 23457999999999999999999999999999999999999999632111 111111111111 000000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC------HHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN------MRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~evl~~ 1096 (1109)
+ .....++.+++.+|++.||.+||+ ++|+++|
T Consensus 225 -----p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 225 -----P---RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred -----C---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 0 011234566788999999999997 7888876
No 137
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.2e-34 Score=323.33 Aligned_cols=244 Identities=23% Similarity=0.280 Sum_probs=192.4
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||+||+|... +++.||+|++.... .......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999765 57899999985432 223345677888888876 699999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~ 152 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KT 152 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Cc
Confidence 99999987643 4889999999999999999999 8999999999999999999999999999987543221 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .............. +
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~~~~~~~-----~------ 216 (320)
T cd05590 153 TSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAILNDEVVY-----P------ 216 (320)
T ss_pred ccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHhcCCCCC-----C------
Confidence 2335799999999999999999999999999999999999999964321 11111111111000 0
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCH------HHHHHHh
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNM------RDVVRQL 1097 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~------~evl~~L 1097 (1109)
. ....++.+++.+|++.||++||++ +++++|-
T Consensus 217 --~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~ 254 (320)
T cd05590 217 --T---WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHP 254 (320)
T ss_pred --C---CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCC
Confidence 0 012345667789999999999998 7777663
No 138
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=7.8e-34 Score=323.06 Aligned_cols=248 Identities=23% Similarity=0.296 Sum_probs=192.0
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.||+|+||+||+|... +++.||+|.+.... .......+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999764 57899999986432 223345677898888877 899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++....... .
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--~ 152 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--T 152 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--c
Confidence 99999886543 4889999999999999999999 89999999999999999999999999999875422211 1
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccc---cccHHHHHHHhh-cCccccccccchhh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKE---RTDIVGWVRSVW-SDTEEINDIVDLSL 1056 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~d~~~ 1056 (1109)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......++.... .....+
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------- 224 (329)
T cd05618 153 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI-------- 224 (329)
T ss_pred cccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCC--------
Confidence 22357899999999999999999999999999999999999999532111 111111111111 100000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC------HHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN------MRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~evl~~ 1096 (1109)
+ .....++.+++.+|++.||++||+ +.|+++|
T Consensus 225 -----p---~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 225 -----P---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred -----C---CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 0 111234566788999999999998 5787776
No 139
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.2e-34 Score=321.53 Aligned_cols=259 Identities=21% Similarity=0.335 Sum_probs=203.0
Q ss_pred hCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 891 (1109)
++|...+.||+|+||.||+|.. ..+..||+|++...........+.+|+++++++ +|+||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 5688899999999999999964 234579999885443344456789999999999 799999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++||||+++|+|.++++... ...+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.++++|||+++.
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 99999999999999997533 234899999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 972 LDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 972 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
..............++..|+|||.+.+..++.++||||+||++|||++ |+.||...... ..........+ ..
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-~~~~~~~~~~~----~~-- 263 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SKFYKLIKEGY----RM-- 263 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-HHHHHHHHcCC----cC--
Confidence 643322111222356788999999999999999999999999999998 88887543211 11111111000 00
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
. . ......++.+++.+|++.+|++||++.|+++.|.+.
T Consensus 264 --~-------~---~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 --A-------Q---PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred --C-------C---CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 0 001123567788899999999999999999999864
No 140
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5.7e-34 Score=315.06 Aligned_cols=257 Identities=26% Similarity=0.426 Sum_probs=202.6
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CC---cEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PN---AVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
.+|+..+.||+|+||.||+|... ++ ..+|+|++...........+..|++++++++|+|++++.+++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 46788899999999999999764 23 378999885443444456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++++|.++++... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.+|++|||++.....
T Consensus 85 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 85 TEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 99999999999997533 35899999999999999999999 88999999999999999999999999999986643
Q ss_pred CCCCce-eeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 975 SPASTT-SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 975 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
...... ......+..|+|||++.+..++.++|||||||++||+++ |+.||..... ... ...... .....
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~---~~~i~~-~~~~~--- 230 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEV---MKAIND-GFRLP--- 230 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHH---HHHHhc-CCCCC---
Confidence 322111 112234567999999998889999999999999999998 9999854321 111 111110 00000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......++.+++.+||+.+|++||++.++++.|.++
T Consensus 231 -----------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 231 -----------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011234567888999999999999999999999875
No 141
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.7e-34 Score=327.98 Aligned_cols=203 Identities=28% Similarity=0.357 Sum_probs=174.3
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|+..+.||+|+||+||+|... +++.||+|++..... ......+.+|+.++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999664 588999999854321 223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999997643 4889999999999999999999 899999999999999999999999999999765321
Q ss_pred CCC---------------------------------ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCC
Q 001275 976 PAS---------------------------------TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKK 1022 (1109)
Q Consensus 976 ~~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~ 1022 (1109)
... ......+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 100 00123579999999999999999999999999999999999999
Q ss_pred CCCCC
Q 001275 1023 ALDPS 1027 (1109)
Q Consensus 1023 p~~~~ 1027 (1109)
||...
T Consensus 235 Pf~~~ 239 (363)
T cd05628 235 PFCSE 239 (363)
T ss_pred CCCCC
Confidence 99643
No 142
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.2e-34 Score=322.26 Aligned_cols=272 Identities=18% Similarity=0.305 Sum_probs=201.1
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|...++||+|+||+||+|+.. +++.||+|++...........+.+|++++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999764 67889999986554444555788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++ ++.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 86 LDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred CCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 985 8888886543 34788999999999999999999 89999999999999999999999999999975433221
Q ss_pred CceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc-------ccc
Q 001275 978 STTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE-------EIN 1049 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 1049 (1109)
......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||...... .......+....... ...
T Consensus 160 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 160 --TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred --ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhhhcchh
Confidence 1223467899999998865 45789999999999999999999998653221 111111111100000 000
Q ss_pred cccchhhhH---HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1050 DIVDLSLME---EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1050 ~~~d~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
...+..... ............++.+++.+|++.||++|||++|+++|-+-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~ 289 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYF 289 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhh
Confidence 000000000 00000001122346678889999999999999999986544
No 143
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.3e-34 Score=333.35 Aligned_cols=267 Identities=20% Similarity=0.245 Sum_probs=198.9
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
..+|.+.+.||+|+||.||+|... .++.||||... ...+.+|++++++++|+|||++++++...+..++|||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e 240 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP 240 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence 346888999999999999999765 47889999532 2245789999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
++. ++|.+++.... ..++|..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 241 ~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 241 KYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred ccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 995 68999886532 25899999999999999999999 8999999999999999999999999999998664332
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccc------cccHHHHHHHhhcCcccccc
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKE------RTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
.........||..|+|||++.+..++.++|||||||++|||++|..++...... ...+...+............
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 222223457999999999999999999999999999999999998765432111 11122222221111111111
Q ss_pred ccchhhhHHhh---------------hchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1051 IVDLSLMEEML---------------VSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1051 ~~d~~~~~~~~---------------~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.....+..... .........++.+++.+|++.||++|||+.|+++|-
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp 456 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLP 456 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCc
Confidence 10101100000 000011123567788899999999999999999874
No 144
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=7.7e-34 Score=322.82 Aligned_cols=247 Identities=25% Similarity=0.317 Sum_probs=192.6
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHH---hcCCCCceeeEeeEEecCCceeEE
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTI---GKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
|++.+.||+|+||.||+|... +++.||||++.... .......+.+|++++ ++++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567789999999999999764 68999999985432 122334566666554 567899999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++|+|..+++. ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 999999999988864 24899999999999999999999 89999999999999999999999999999875322
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.. .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... .............
T Consensus 154 ~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~i~~~~~~~------ 220 (324)
T cd05589 154 FG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDSIVNDEVRY------ 220 (324)
T ss_pred CC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCCCCC------
Confidence 21 1223457999999999999999999999999999999999999998643211 1111111110000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQL 1097 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L 1097 (1109)
. .....++.+++.+|++.||++|| ++.|++++-
T Consensus 221 -------p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~ 258 (324)
T cd05589 221 -------P---RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQP 258 (324)
T ss_pred -------C---CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCC
Confidence 0 01123456688899999999999 678887764
No 145
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=8.6e-34 Score=315.56 Aligned_cols=249 Identities=23% Similarity=0.296 Sum_probs=194.1
Q ss_pred eecccCeEEEEEEeC-CCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 827 IGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
||+|+||+||++... +++.||+|++...... .....+..|++++++++|+||+++.+++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999664 6889999998543222 2234677899999999999999999999999999999999999999
Q ss_pred HHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceee
Q 001275 904 RDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSI 982 (1109)
Q Consensus 904 ~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 982 (1109)
.+++.... ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++........ ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 98875432 2346899999999999999999999 89999999999999999999999999999986643322 122
Q ss_pred ecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhh
Q 001275 983 SVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLV 1062 (1109)
Q Consensus 983 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 1062 (1109)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..............
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~---------------- 218 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILNDSV---------------- 218 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcccCC----------------
Confidence 3578999999999999999999999999999999999999996432111 11111111100000
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHh
Q 001275 1063 SSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQL 1097 (1109)
Q Consensus 1063 ~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L 1097 (1109)
........++.+++.+|++.||++|| +++|+++|-
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~ 258 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHP 258 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcCh
Confidence 00011223456677899999999999 788898763
No 146
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=8e-34 Score=312.65 Aligned_cols=254 Identities=26% Similarity=0.359 Sum_probs=201.0
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|.+.++||+|+||+||+|...++..||+|++... ......+.+|++++++++|+||+++++++. .+..++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYM 82 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccC--ccCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcC
Confidence 568889999999999999998877778999988532 233457899999999999999999999874 45689999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.+++.... ...+++..+..++.|+++||+|+| +.+|+||||||+||++++++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~- 157 (262)
T cd05071 83 SKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY- 157 (262)
T ss_pred CCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccccc-
Confidence 9999999997632 235789999999999999999999 89999999999999999999999999999986643322
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||+..+..++.++||||||+++|||++ |+.||...... .. ........ ..
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~--~~---~~~~~~~~-~~--------- 222 (262)
T cd05071 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EV---LDQVERGY-RM--------- 222 (262)
T ss_pred ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH--HH---HHHHhcCC-CC---------
Confidence 11223456778999999988899999999999999999999 77777543211 11 11110000 00
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.........+.+++.+|++.+|++||+++++++.|++.
T Consensus 223 -----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 223 -----PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -----CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00112234567889999999999999999999999875
No 147
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.9e-34 Score=322.31 Aligned_cols=248 Identities=23% Similarity=0.303 Sum_probs=194.8
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCC-CceeeEeeEEecCCceeEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRH-RNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 895 (1109)
+|++.+.||+|+||.||+|... +++.||+|++.... .......+..|.+++..++| ++|+++++++...+..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999765 57889999986432 23344567889999999966 56888999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999987643 4789999999999999999999 899999999999999999999999999998753221
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~~i~~~~~~~~------ 221 (324)
T cd05587 155 G--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED-----ELFQSIMEHNVSYP------ 221 (324)
T ss_pred C--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHHcCCCCCC------
Confidence 1 1223457999999999999999999999999999999999999999643211 11111111110000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNM-----RDVVRQ 1096 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~~ 1096 (1109)
. ....++.+++.+|++.||++|++. +|+.+|
T Consensus 222 -------~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 222 -------K---SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred -------C---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0 112345667789999999999976 677665
No 148
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3.7e-34 Score=319.46 Aligned_cols=272 Identities=21% Similarity=0.319 Sum_probs=202.1
Q ss_pred hCCCCCceeecccCeEEEEEEe-----CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecC--Cce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-----GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 891 (1109)
+.|.+.+.||+|+||.||+|.. .++..||+|.+...........+.+|++++++++|||++++.+++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3567889999999999999964 357889999985444444556799999999999999999999998775 567
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||+++.
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccc
Confidence 89999999999999986532 24899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCCc-eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 972 LDKSPAST-TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 972 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
........ ......++..|+|||+..+..++.++|||||||++||+++++.|........ ...... .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~---~~~~~~-~~~~~~~~~ 234 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLF---LKMIGP-THGQMTVTR 234 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchh---hhhccc-ccccccHHH
Confidence 64432211 1123456778999999988889999999999999999999887643221100 000000 000000000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.+. ........+.......++.+++.+|++.+|++||+++|+++.++++
T Consensus 235 ~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 235 LVR-VLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHH-HHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 000 0000000000112235677888999999999999999999999875
No 149
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=4.2e-34 Score=347.18 Aligned_cols=261 Identities=23% Similarity=0.296 Sum_probs=199.9
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|++.++||+|+||.||+|... +++.||+|++..... +....++.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 47888999999999999999764 589999999854322 223457899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCC--------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 896 RYMENGSLRDVLHSITP--------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
||+++|+|.+++..... ....++..+++++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999864211 123567788999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCC----------------CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCcccc
Q 001275 968 IAKLLDKSPA----------------STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKER 1031 (1109)
Q Consensus 968 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~ 1031 (1109)
+++....... ........||+.|+|||++.+..++.++||||+||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986621110 001112469999999999999999999999999999999999999986422110
Q ss_pred ccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC-CHHHHHHHhhhC
Q 001275 1032 TDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP-NMRDVVRQLVDA 1100 (1109)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-s~~evl~~L~~~ 1100 (1109)
.. ... ...++... .........+.+++.+|++.||++|| +++++.+.|+..
T Consensus 239 --i~--~~~---------~i~~P~~~-----~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 239 --IS--YRD---------VILSPIEV-----APYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred --hh--hhh---------hccChhhc-----cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 00 000 00010000 00112234466788899999999996 556677766654
No 150
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=4.5e-34 Score=320.85 Aligned_cols=257 Identities=21% Similarity=0.304 Sum_probs=198.4
Q ss_pred hCCCCCceeecccCeEEEEEEeCC-Cc--EEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP-NA--VFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 894 (1109)
++|++.++||+|+||.||+|...+ +. .+++|.+.........+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468889999999999999997643 32 46888775433344456789999999999 799999999999998999999
Q ss_pred EEeccCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcE
Q 001275 895 YRYMENGSLRDVLHSITP-------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEP 961 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 961 (1109)
+||+++|+|.++++.... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 999999999999975321 134889999999999999999999 8999999999999999999999
Q ss_pred EEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHH
Q 001275 962 HISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRS 1040 (1109)
Q Consensus 962 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 1040 (1109)
||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |+.||...... .....
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-----~~~~~ 230 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-----ELYEK 230 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHHH
Confidence 99999998643211 11111233567999999998889999999999999999998 99998543211 11111
Q ss_pred hhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1041 VWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1041 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
..... ... .......++.+++.+|++.+|.+||+++++++.|..+.
T Consensus 231 ~~~~~-------~~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 231 LPQGY-------RME--------KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred HhcCC-------CCC--------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11000 000 00112234667888999999999999999999988763
No 151
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.2e-34 Score=310.78 Aligned_cols=248 Identities=26% Similarity=0.334 Sum_probs=196.6
Q ss_pred ceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCHH
Q 001275 825 HVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSLR 904 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 904 (1109)
++||+|+||.||+|...+++.||+|.+...........+.+|++++++++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999998754443444457889999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeec
Q 001275 905 DVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISV 984 (1109)
Q Consensus 905 ~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 984 (1109)
+++.... ..+++..+..++.|+++|+.|+| +.+++||||||+||+++.++.+|++|||++......... .....
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~ 154 (250)
T cd05085 81 SFLRKKK--DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLK 154 (250)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCC
Confidence 9987543 34789999999999999999999 899999999999999999999999999998754332211 11122
Q ss_pred ccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 985 VGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 985 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
.++..|+|||+..+..++.++||||||+++||+++ |..||...... .....+.. .... ..
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~~----~~~~-~~------------ 215 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVEK----GYRM-SC------------ 215 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHHc----CCCC-CC------------
Confidence 44678999999998889999999999999999998 88888543111 11111110 0000 00
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
......++.+++.+|++.+|++||++.|+++.|.
T Consensus 216 -~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 216 -PQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred -CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 0112345677888999999999999999999875
No 152
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.5e-33 Score=311.48 Aligned_cols=260 Identities=20% Similarity=0.355 Sum_probs=207.0
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|+..+.||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999776 78999999885322 2233567899999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 896 RYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
||+++|+|.+++.... ....+++..+..++.++++|++||| +.+|+||||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999986532 2345889999999999999999999 89999999999999999999999999999876543
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
... ......++..|+|||...+..++.++|||||||++|+|++|+.||..... ............ .....
T Consensus 159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~--~~~~~--- 228 (267)
T cd08224 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEKC--DYPPL--- 228 (267)
T ss_pred CCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhhhcC--CCCCC---
Confidence 221 12234688899999999988899999999999999999999999854321 111111111100 00000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
........+.+++.+||+.+|++||++.++++.++++
T Consensus 229 ---------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 229 ---------PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred ---------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 0012233566788899999999999999999999876
No 153
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=5.2e-34 Score=330.10 Aligned_cols=256 Identities=23% Similarity=0.322 Sum_probs=197.6
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|+..++||+|+||+||+|+.. +++.||||++.... .......+.+|++++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 36888999999999999999764 68999999985432 1233456789999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999997643 4899999999999999999999 899999999999999999999999999998754321
Q ss_pred CCCc------------------------------------eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh
Q 001275 976 PAST------------------------------------TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT 1019 (1109)
Q Consensus 976 ~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt 1019 (1109)
.... .....+||+.|+|||++.+..++.++||||+||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 1000 0112469999999999999999999999999999999999
Q ss_pred CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHH
Q 001275 1020 RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN---MRDVVRQ 1096 (1109)
Q Consensus 1020 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~evl~~ 1096 (1109)
|+.||...... ............. .. ... .... .++.+++.+|+. +|.+|++ ++|+++|
T Consensus 235 G~~Pf~~~~~~-----~~~~~i~~~~~~~-~~-~~~-------~~~s---~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 235 GYPPFCSDNPQ-----ETYRKIINWKETL-QF-PDE-------VPLS---PEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCCHH-----HHHHHHHcCCCcc-CC-CCC-------CCCC---HHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 99999643211 1111111100000 00 000 0112 234456668886 9999997 9999887
Q ss_pred hh
Q 001275 1097 LV 1098 (1109)
Q Consensus 1097 L~ 1098 (1109)
-+
T Consensus 297 ~~ 298 (364)
T cd05599 297 PF 298 (364)
T ss_pred CC
Confidence 43
No 154
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.3e-34 Score=327.03 Aligned_cols=255 Identities=21% Similarity=0.239 Sum_probs=199.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|.+.+.||+|+||+||+|... +++.||+|++..... ......+.+|+.+++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888999999999999999664 688999999865432 234456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999997642 34889999999999999999999 899999999999999999999999999999876443
Q ss_pred CCCceeeecccCcccccccccc------cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc
Q 001275 976 PASTTSISVVGTIGYIAPENAF------TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN 1049 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1109)
... ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... .............
T Consensus 156 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~~~~- 228 (330)
T cd05601 156 KMV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KTYNNIMNFQRFL- 228 (330)
T ss_pred Cce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HHHHHHHcCCCcc-
Confidence 221 223357899999999886 456789999999999999999999999643211 1111111110000
Q ss_pred cccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1050 DIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1050 ~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
...+ ......++.+++..|++ +|++||+++++++|-
T Consensus 229 ~~~~-----------~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~ 264 (330)
T cd05601 229 KFPE-----------DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHP 264 (330)
T ss_pred CCCC-----------CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCC
Confidence 0000 00112335567778997 999999999999874
No 155
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-35 Score=323.95 Aligned_cols=255 Identities=24% Similarity=0.334 Sum_probs=206.1
Q ss_pred CCCCceeecccCeEEEEEEeC--CC--cEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 821 LNAKHVIGRGAHGIVYKASLG--PN--AVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
....++||+|.||.|++|.|+ +| ..||||.+....-.....+|.+|+.+|.+++|+|++++||+..+ ....+|+|
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~E 190 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFE 190 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhh
Confidence 344678999999999999775 23 45899999766555577899999999999999999999999876 77899999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
.++.|+|.+.++. .....+-......++.|||.|+.||. .++.|||||..+|+++.....|||+|||+.+-+...+
T Consensus 191 LaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 191 LAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 9999999999998 55567888889999999999999999 9999999999999999999999999999999887655
Q ss_pred CCceee-ecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 977 ASTTSI-SVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 977 ~~~~~~-~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
....+. ...-+..|+|||.+..+.++.++|||+|||++|||+| |..||-+-.. .++.. .+|
T Consensus 267 d~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--~qIL~--------------~iD- 329 (1039)
T KOG0199|consen 267 DMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--IQILK--------------NID- 329 (1039)
T ss_pred cceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--HHHHH--------------hcc-
Confidence 444332 2345678999999999999999999999999999999 4556643211 11111 111
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
..........+.+++++++.+||...|++||++..+.+.+...
T Consensus 330 ---~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 330 ---AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred ---ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence 0011122346678899999999999999999999998655443
No 156
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.4e-34 Score=321.72 Aligned_cols=256 Identities=21% Similarity=0.319 Sum_probs=198.1
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCc--EEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNA--VFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 894 (1109)
++|++.+.||+|+||.||+|... ++. .+|+|++...........+.+|++++.++ +|+||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 56888899999999999999764 344 45777664333334456788999999999 899999999999999999999
Q ss_pred EEeccCCCHHHHHhccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcE
Q 001275 895 YRYMENGSLRDVLHSITP-------------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEP 961 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 961 (1109)
+||+++|+|.++++.... ...+++..++.++.|+++|++||| +.+|+||||||+||++++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcE
Confidence 999999999999975431 235789999999999999999999 8999999999999999999999
Q ss_pred EEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHH
Q 001275 962 HISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRS 1040 (1109)
Q Consensus 962 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~ 1040 (1109)
||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||..... .+.......
T Consensus 164 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~ 238 (303)
T cd05088 164 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQ 238 (303)
T ss_pred EeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--HHHHHHHhc
Confidence 99999998643211 11111234678999999988889999999999999999998 9988854321 111111100
Q ss_pred hhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1041 VWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1041 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
. ... . .......++.+++.+|++.+|++||+++++++++.++
T Consensus 239 ---~-~~~-~-------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 239 ---G-YRL-E-------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred ---C-CcC-C-------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0 000 0 0001123467788899999999999999999998775
No 157
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.4e-34 Score=334.15 Aligned_cols=256 Identities=23% Similarity=0.289 Sum_probs=195.2
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|.+.++||+|+||+||+|.. .+++.||||++.... .......+.+|++++++++||||+++++++.+.+..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999999965 468999999985432 1223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999997643 4788999999999999999999 899999999999999999999999999999643211
Q ss_pred CCC------------c---------------------------------eeeecccCcccccccccccCCCCccCcchhh
Q 001275 976 PAS------------T---------------------------------TSISVVGTIGYIAPENAFTTAKSKESDVYSY 1010 (1109)
Q Consensus 976 ~~~------------~---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSl 1010 (1109)
... . ......||+.|+|||++.+..++.++||||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 000 0 0012469999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCC---C
Q 001275 1011 GVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSN---R 1087 (1109)
Q Consensus 1011 Gvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~---R 1087 (1109)
||++|||++|+.||...... ............. .+ +. ......++.+++.+|++ +|.+ |
T Consensus 235 Gvil~elltG~~Pf~~~~~~-----~~~~~i~~~~~~~-~~--p~---------~~~~s~~~~dli~~lL~-~~~~r~~r 296 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSH-----ETYRKIINWRETL-YF--PD---------DIHLSVEAEDLIRRLIT-NAENRLGR 296 (377)
T ss_pred chhhhhhhcCCCCCCCCCHH-----HHHHHHHccCCcc-CC--CC---------CCCCCHHHHHHHHHHhc-CHhhcCCC
Confidence 99999999999999643221 1111111100000 00 00 00111234556678887 6665 4
Q ss_pred CCHHHHHHHhh
Q 001275 1088 PNMRDVVRQLV 1098 (1109)
Q Consensus 1088 Ps~~evl~~L~ 1098 (1109)
+++.|+++|-+
T Consensus 297 ~~~~~~l~hp~ 307 (377)
T cd05629 297 GGAHEIKSHPF 307 (377)
T ss_pred CCHHHHhcCCC
Confidence 69999999853
No 158
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.1e-33 Score=314.66 Aligned_cols=253 Identities=23% Similarity=0.354 Sum_probs=199.0
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|+..++||+|+||.||+|.. .+++.||+|.+..........++.+|++++++++||||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577889999999999999965 568899999886543444456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|..+. .+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 81 MDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred CCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-
Confidence 9999997652 2678888999999999999999 8999999999999999999999999999998654321
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccH--HHHHHHhhcCccccccccchh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDI--VGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.....||..|+|||++.+..++.++||||+|+++|+|++|+.||.......... ........... .+.
T Consensus 150 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 219 (279)
T cd06619 150 ---AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-------PPV 219 (279)
T ss_pred ---ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-------CCC
Confidence 223578999999999999999999999999999999999999986532221111 01111100000 000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
. . ......++.+++.+|++.+|++||+++|++++-+-
T Consensus 220 ~----~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~ 256 (279)
T cd06619 220 L----P---VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFI 256 (279)
T ss_pred C----C---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccc
Confidence 0 0 01122346678889999999999999999988543
No 159
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=8.2e-34 Score=322.19 Aligned_cols=244 Identities=23% Similarity=0.291 Sum_probs=192.9
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||.||+|+.. +++.||+|++.... .......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999765 57899999985432 223345577888888866 899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++....... .
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~ 152 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--T 152 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc--c
Confidence 99999987543 4889999999999999999999 89999999999999999999999999999875432211 1
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ............. +.
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-----~~~~~i~~~~~~~-----p~----- 217 (321)
T cd05591 153 TTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-----DLFESILHDDVLY-----PV----- 217 (321)
T ss_pred ccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCCCCC-----CC-----
Confidence 23357899999999999999999999999999999999999999643211 1111111111000 00
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCC-------CHHHHHHHh
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRP-------NMRDVVRQL 1097 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-------s~~evl~~L 1097 (1109)
....++.+++.+|++.||++|| +++++++|-
T Consensus 218 ------~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp 255 (321)
T cd05591 218 ------WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHP 255 (321)
T ss_pred ------CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCC
Confidence 0123456677899999999999 888998774
No 160
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.1e-33 Score=311.18 Aligned_cols=253 Identities=28% Similarity=0.389 Sum_probs=200.1
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|++.++||+|+||.||+|...++..+|+|.+... ......+.+|++++++++|+|++++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~--~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPG--TMSPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCC--CCCHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 468888999999999999999888889999988532 223567899999999999999999999875 45689999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.++++... ...+++..+..++.+++.|++||| +.+|+||||||+||++++++.++|+|||.+........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05070 83 SKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc-
Confidence 9999999997643 335899999999999999999999 88999999999999999999999999999986643321
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||...+..++.++||||||+++|||++ |+.||..... .+..... .... .. .
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~---~~~~-~~------~-- 223 (260)
T cd05070 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--REVLEQV---ERGY-RM------P-- 223 (260)
T ss_pred ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH---HcCC-CC------C--
Confidence 11122345678999999988889999999999999999999 8888754211 1111111 1000 00 0
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
........+.+++.+|++.+|++||+++++.+.|++
T Consensus 224 ------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 ------CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ------CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001122456778889999999999999999998875
No 161
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.2e-33 Score=310.99 Aligned_cols=253 Identities=25% Similarity=0.354 Sum_probs=201.7
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|++.++||+|+||.||+|...+++.||+|.+... .....++.+|++++++++|+||+++++++. .+..++||||+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG--SMSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCC--CCcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 568889999999999999999888999999988432 334567899999999999999999999874 56789999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.+++.... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||++........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 83 ENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 9999999987643 345899999999999999999999 89999999999999999999999999999986643221
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||++.+..++.++||||||+++||+++ |+.||..... ......... .. .. ..
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~---~~-~~-~~------ 224 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN--PEVIQNLER---GY-RM-PR------ 224 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHHHc---CC-CC-CC------
Confidence 11223356778999999998889999999999999999999 9998854321 111111100 00 00 00
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
......++.+++.+|++.+|++||+++++++.|+.
T Consensus 225 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 225 -------PDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01112357778889999999999999999999875
No 162
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.4e-33 Score=313.21 Aligned_cols=246 Identities=24% Similarity=0.301 Sum_probs=190.5
Q ss_pred eecccCeEEEEEEeC-CCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 827 IGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
||+|+||+||++... +|+.||+|++...... .....+..|++++++++||||+++++++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999764 5899999998543221 2234556799999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeee
Q 001275 904 RDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSIS 983 (1109)
Q Consensus 904 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 983 (1109)
.+++.... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~ 153 (277)
T cd05607 81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQ 153 (277)
T ss_pred HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeec
Confidence 99886533 234889999999999999999999 8999999999999999999999999999998664322 2233
Q ss_pred cccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 984 VVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 984 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
..|+..|+|||++.+..++.++||||+||++|||++|+.||...... .......+...... ... .
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~------~~~------~-- 218 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLEDE------VKF------E-- 218 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhccc------ccc------c--
Confidence 57899999999999989999999999999999999999998643211 11111111111100 000 0
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRPNMRDVVR 1095 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 1095 (1109)
......++.+++.+|++.||++||+++|+++
T Consensus 219 -~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 219 -HQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred -cccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 0111234567888999999999999966553
No 163
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=5.1e-34 Score=315.68 Aligned_cols=255 Identities=21% Similarity=0.265 Sum_probs=186.8
Q ss_pred ceeecccCeEEEEEEeCC---CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 825 HVIGRGAHGIVYKASLGP---NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
+.||+|+||+||+|.... ...+|+|.+...........+.+|++.++.++|+||+++++++...+..++||||+++|
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 359999999999996543 35678887654434444567889999999999999999999999999999999999999
Q ss_pred CHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 902 SLRDVLHSITP--PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 902 sL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+|.+++..... ....++.....++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 99999976542 223567888999999999999999 8999999999999999999999999999987543332222
Q ss_pred eeeecccCccccccccccc-------CCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccc
Q 001275 980 TSISVVGTIGYIAPENAFT-------TAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDI 1051 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
......++..|+|||+... ..++.++||||+||++|||++ |..||...... +. ........ ....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~~---~~~~~~~~--~~~~ 230 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE--QV---LKQVVREQ--DIKL 230 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH--HH---HHHHhhcc--CccC
Confidence 2233456778999998643 356889999999999999999 66776432111 11 11111110 0001
Q ss_pred cchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1052 VDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1052 ~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.++.. . ......+.+++..|| .||++||+++||++.|.
T Consensus 231 ~~~~~-----~---~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQL-----D---LKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCcc-----c---ccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 01110 0 111223444666788 59999999999998873
No 164
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.5e-34 Score=304.29 Aligned_cols=256 Identities=23% Similarity=0.289 Sum_probs=202.1
Q ss_pred hCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+.|+..+.||+|.-|+||.++..+ +..+|+|++.+..- .....+.+.|-+|++.++||.++.+++.++.++..|+||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 346667889999999999998765 58999999955432 233457888999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
|||+||+|....++. +...+++..+..+|.+|+-||+||| ..|||+|||||+||||.++|++.++||.++......
T Consensus 157 eyCpGGdL~~LrqkQ-p~~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQ-PGKRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhC-CCCccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 999999999988764 4567999999999999999999999 999999999999999999999999999987543210
Q ss_pred --------------------------------C-C---------------------CceeeecccCcccccccccccCCC
Q 001275 976 --------------------------------P-A---------------------STTSISVVGTIGYIAPENAFTTAK 1001 (1109)
Q Consensus 976 --------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~ 1001 (1109)
. . .......+||-.|.|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 001123589999999999999999
Q ss_pred CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccC
Q 001275 1002 SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTE 1081 (1109)
Q Consensus 1002 ~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 1081 (1109)
+.++|.|+|||++|||+.|+.||.+.... ..+...+.+ .+.- +..........++|++.+.
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~-~Tl~NIv~~--------------~l~F----p~~~~vs~~akDLIr~LLv 373 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNK-ETLRNIVGQ--------------PLKF----PEEPEVSSAAKDLIRKLLV 373 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCch-hhHHHHhcC--------------CCcC----CCCCcchhHHHHHHHHHhc
Confidence 99999999999999999999999765322 222222111 1100 0011222345557779999
Q ss_pred CCCCCCCC----HHHHHHHh
Q 001275 1082 KKPSNRPN----MRDVVRQL 1097 (1109)
Q Consensus 1082 ~dP~~RPs----~~evl~~L 1097 (1109)
+||++|.. |.||-+|-
T Consensus 374 KdP~kRlg~~rGA~eIK~Hp 393 (459)
T KOG0610|consen 374 KDPSKRLGSKRGAAEIKRHP 393 (459)
T ss_pred cChhhhhccccchHHhhcCc
Confidence 99999987 88888774
No 165
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.9e-34 Score=325.40 Aligned_cols=260 Identities=22% Similarity=0.347 Sum_probs=203.4
Q ss_pred hCCCCCceeecccCeEEEEEEeC--------CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCC
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG--------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKD 889 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 889 (1109)
.+|.+.+.||+|+||.||+|... .+..||+|.+..........++.+|+++++++ +|+||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888999999999999999642 12368999875444444456789999999999 8999999999999999
Q ss_pred ceeEEEEeccCCCHHHHHhccC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeC
Q 001275 890 CGIIMYRYMENGSLRDVLHSIT-------------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLD 956 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~ 956 (1109)
..++++||+++|+|.+++.... ....+++..++.++.|+++|++||| +.+|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEc
Confidence 9999999999999999997642 1235889999999999999999999 89999999999999999
Q ss_pred CCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHH
Q 001275 957 SEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIV 1035 (1109)
Q Consensus 957 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~ 1035 (1109)
+++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |+.||.... ..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~ 243 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VE 243 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----HH
Confidence 999999999999986644322222222345578999999999999999999999999999998 777775321 11
Q ss_pred HHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1036 GWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
.+......... . .. ......++.+++.+||+.+|++||++.|++++|.++.
T Consensus 244 ~~~~~~~~~~~-~-~~-------------~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 244 ELFKLLKEGHR-M-DK-------------PANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHcCCC-C-CC-------------CCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 11111111100 0 00 0112345677888999999999999999999998764
No 166
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.4e-33 Score=319.15 Aligned_cols=243 Identities=23% Similarity=0.324 Sum_probs=189.7
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.||+|+||+||+|+.. +++.||+|.+..... ......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999765 578999999864321 23344566778888764 899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--AK 152 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--Cc
Confidence 99999997633 4789999999999999999999 8999999999999999999999999999987532221 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+. ...... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i~---~~~~~~----~------- 216 (316)
T cd05619 153 TCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSIR---MDNPCY----P------- 216 (316)
T ss_pred eeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHH---hCCCCC----C-------
Confidence 2345799999999999999999999999999999999999999964321 11111111 000000 0
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMR-DVVRQ 1096 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~~ 1096 (1109)
. ....++.+++.+|++.||++||++. ++.+|
T Consensus 217 --~---~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 217 --R---WLTREAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred --c---cCCHHHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 0 0112355677899999999999997 66654
No 167
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=8.6e-34 Score=320.10 Aligned_cols=267 Identities=23% Similarity=0.335 Sum_probs=201.8
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
+|+..++||+|+||.||+|... ++..+|+|.+..........++.+|++++++++||||+++++++..++..++|+||+
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~ 81 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHM 81 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeecc
Confidence 6888999999999999999764 578888888754433333456889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++++|.++++... .+++..+..++.|+++|++||| + .+++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 154 (308)
T cd06615 82 DGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 154 (308)
T ss_pred CCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc-
Confidence 9999999997643 4789999999999999999999 5 589999999999999999999999999987553321
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc-------
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND------- 1050 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 1050 (1109)
.....++..|+|||...+..++.++||||||+++|||++|+.||.... ......+.............
T Consensus 155 ---~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (308)
T cd06615 155 ---ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGH 229 (308)
T ss_pred ---cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCC
Confidence 123578899999999988889999999999999999999999986432 11111111111000000000
Q ss_pred -ccch------hhhHHhhh---ch--hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1051 -IVDL------SLMEEMLV---SS--IRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1051 -~~d~------~~~~~~~~---~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.-++ ........ .. ......++.+++.+|++.+|++||+++|++++-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0000 00000000 00 0012345778899999999999999999999865
No 168
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4.8e-34 Score=323.78 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=192.2
Q ss_pred ceeecccCeEEEEEEe----CCCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEecc
Q 001275 825 HVIGRGAHGIVYKASL----GPNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
+.||+|+||.||+++. .+|+.||+|++...... .....+.+|++++++++||||+++++++...+..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999864 46789999998643322 234467789999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++...... .
T Consensus 82 ~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--~ 153 (318)
T cd05582 82 GGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--K 153 (318)
T ss_pred CCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--C
Confidence 999999986533 4899999999999999999999 8999999999999999999999999999998654321 1
Q ss_pred eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHH
Q 001275 980 TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEE 1059 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1059 (1109)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...............
T Consensus 154 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~i~~~~~~~p---------- 218 (318)
T cd05582 154 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMTMILKAKLGMP---------- 218 (318)
T ss_pred ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHHHHHcCCCCCC----------
Confidence 22345799999999999988899999999999999999999999864321 111111111110000
Q ss_pred hhhchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 001275 1060 MLVSSIRDQVIDVLLVALRCTEKKPSNRPN-----MRDVVRQ 1096 (1109)
Q Consensus 1060 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 1096 (1109)
.....++.+++.+|++.||++||+ +++++++
T Consensus 219 ------~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 219 ------QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred ------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 011234556778999999999999 4556654
No 169
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-33 Score=310.18 Aligned_cols=249 Identities=21% Similarity=0.297 Sum_probs=193.4
Q ss_pred eeecccCeEEEEEEeC---CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCC
Q 001275 826 VIGRGAHGIVYKASLG---PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGS 902 (1109)
Q Consensus 826 ~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 902 (1109)
.||+|+||.||+|.+. .+..||+|.+...........+.+|++++++++|+||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999653 355799998855444444567899999999999999999999885 457899999999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc-ee
Q 001275 903 LRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST-TS 981 (1109)
Q Consensus 903 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~-~~ 981 (1109)
|.+++.... ..+++..+++++.|+++|++||| +.+++||||||+||+++.++.+|++|||++.......... ..
T Consensus 81 L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 81 LNKFLSGKK--DEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred HHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 999987532 35899999999999999999999 8899999999999999999999999999998654332211 11
Q ss_pred eecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 982 ISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 982 ~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
....++..|+|||.+.+..++.++|||||||++||+++ |+.||...... +....+. ... .. +
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~---~~~-~~----~------- 218 (257)
T cd05115 156 SAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIE---QGK-RL----D------- 218 (257)
T ss_pred CCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHH---CCC-CC----C-------
Confidence 12234678999999988889999999999999999996 99988643211 1111111 100 00 0
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......++.+++.+||+.+|++||++.++.+.|+..
T Consensus 219 ---~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 ---CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 0011234566788899999999999999999999865
No 170
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1e-33 Score=326.99 Aligned_cols=256 Identities=21% Similarity=0.286 Sum_probs=198.7
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
.++|+..++||+|+||+||+|+.. +++.||+|++.... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 467889999999999999999764 68899999985432 222344578899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++|+|.+++... .++...+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||++.....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 122 MEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 9999999999998753 2778888899999999999999 89999999999999999999999999999986643
Q ss_pred CCCCceeeecccCcccccccccccC----CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTT----AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||..... .............. .
T Consensus 195 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~~~~~~~-~ 267 (370)
T cd05596 195 NGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMDHKNSL-T 267 (370)
T ss_pred CCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcCCCcC-C
Confidence 221 112235799999999988653 478999999999999999999999965321 11111111110000 0
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSN--RPNMRDVVRQLV 1098 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~L~ 1098 (1109)
+ + .......++.+++.+|++.+|++ ||+++|+++|-+
T Consensus 268 ~--~---------~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 268 F--P---------DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred C--C---------CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 0 0 00011234556777999999998 999999998753
No 171
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1e-33 Score=326.55 Aligned_cols=256 Identities=21% Similarity=0.286 Sum_probs=196.3
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
.++|+..++||+|+||.||+|+.. +++.||+|.+.... .......+.+|+.+++.++||||+++++++..++..++|
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 468999999999999999999765 57899999985422 222345678999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||++.....
T Consensus 122 ~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 122 MEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 9999999999999753 3788889999999999999999 89999999999999999999999999999987643
Q ss_pred CCCCceeeecccCcccccccccccCC----CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTA----KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
... .......||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... .............. .
T Consensus 195 ~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-----~~~~~~i~~~~~~~-~ 267 (370)
T cd05621 195 TGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-----VGTYSKIMDHKNSL-N 267 (370)
T ss_pred CCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCccc-C
Confidence 221 1223457999999999887543 68899999999999999999999964321 11111111110000 0
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSN--RPNMRDVVRQLV 1098 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~L~ 1098 (1109)
+ + ........+.+++.+|++.+|.+ ||+++|+++|-+
T Consensus 268 ~--p---------~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 268 F--P---------EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred C--C---------CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 0 0 00011223444566788765544 899999999854
No 172
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-33 Score=312.87 Aligned_cols=254 Identities=24% Similarity=0.308 Sum_probs=198.1
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|++.+.||+|+||.||+|.. .+++.||+|++... .......+.+|+.++++++||||+++++++...+..++|+||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLE-PGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecC-ccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 5688999999999999999976 56889999988533 233445688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.++++... .+++..+..++.|+++|++||| +.+|+|||+||+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06646 88 CGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI- 160 (267)
T ss_pred CCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeecccc-
Confidence 99999999987533 4789999999999999999999 8999999999999999999999999999998664321
Q ss_pred CceeeecccCcccccccccc---cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 978 STTSISVVGTIGYIAPENAF---TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.......++..|+|||.+. ...++.++||||+||++|||++|+.||........ ...+ ... ....+
T Consensus 161 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~-----~~~----~~~~~ 229 (267)
T cd06646 161 -AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLM-----SKS----NFQPP 229 (267)
T ss_pred -cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heee-----ecC----CCCCC
Confidence 1122356889999999874 34578899999999999999999999853321100 0000 000 00000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
... ........+.+++.+||+.+|++||+++++++++
T Consensus 230 ~~~------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 230 KLK------DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCc------cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 000 0011224566788899999999999999999876
No 173
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=6.8e-34 Score=335.03 Aligned_cols=264 Identities=22% Similarity=0.334 Sum_probs=192.3
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecC--------
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK-------- 888 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------- 888 (1109)
.++|...++||+|+||.||+|.. .+++.||||++... .....+|+.++++++|||||++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 35789999999999999999976 46889999987432 22346799999999999999998876432
Q ss_pred CceeEEEEeccCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-cEEEecc
Q 001275 889 DCGIIMYRYMENGSLRDVLHSI-TPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-EPHISDF 966 (1109)
Q Consensus 889 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~Df 966 (1109)
...++||||+++ ++.+++... .....+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 235689999985 787776542 22345889999999999999999999 89999999999999998665 7999999
Q ss_pred cCCcccCCCCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc
Q 001275 967 GIAKLLDKSPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 967 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
|+|+.+..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+...+.......
T Consensus 216 Gla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 216 GSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSS-VDQLVRIIQVLGTPT 291 (440)
T ss_pred ccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCC
Confidence 99986643322 2235789999999988764 689999999999999999999999865321 111222211111000
Q ss_pred cc-c------------ccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1046 EE-I------------NDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1046 ~~-~------------~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.. . ..+....+. ...+. ....++.+++.+||+.||++||++.|+++|-+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~~p~---~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~ 353 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLK-KVFPK---GTPDDAINFISQFLKYEPLKRLNPIEALADPF 353 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHH-HHhcc---CCCHHHHHHHHHHCCCChhHCcCHHHHhCChh
Confidence 00 0 000000000 00000 12245777888999999999999999998754
No 174
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.3e-33 Score=319.49 Aligned_cols=243 Identities=22% Similarity=0.265 Sum_probs=189.6
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||.||+|+.. +++.||+|.+..... ......+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999765 588999999864321 23344567788887754 899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NR 152 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--Cc
Confidence 99999987643 4789999999999999999999 8999999999999999999999999999987432211 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... . ...............
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~---~~~~~~~~~~~~~~~---------- 217 (316)
T cd05620 153 ASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--D---ELFESIRVDTPHYPR---------- 217 (316)
T ss_pred eeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--H---HHHHHHHhCCCCCCC----------
Confidence 2345799999999999999999999999999999999999999964321 1 111111111000000
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHH-HHHHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMR-DVVRQ 1096 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~-evl~~ 1096 (1109)
....++.+++.+|++.||++||++. ++.+|
T Consensus 218 ------~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 218 ------WITKESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred ------CCCHHHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 0122355677899999999999984 66644
No 175
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=9.8e-34 Score=312.97 Aligned_cols=257 Identities=26% Similarity=0.393 Sum_probs=202.2
Q ss_pred hCCCCCceeecccCeEEEEEEeC----CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG----PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
++|+..+.||+|+||.||+|... .+..+|+|.+...........+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 56888999999999999999753 23478999875443334456789999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||++.....
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999997643 35899999999999999999999 89999999999999999999999999999987644
Q ss_pred CCCCc-eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 975 SPAST-TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 975 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
..... ......++..|+|||++.+..++.++||||||+++||+++ |+.||..... .+....+...+ ...
T Consensus 159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~~~~~~~~~~----~~~--- 229 (267)
T cd05066 159 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QDVIKAIEEGY----RLP--- 229 (267)
T ss_pred ccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HHHHHHHhCCC----cCC---
Confidence 32111 1112234568999999998899999999999999999887 9998854321 11111111100 000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
........+.+++.+|++.+|++||++.++++.|.++
T Consensus 230 -----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 230 -----------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0011234567788899999999999999999999865
No 176
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=8.3e-34 Score=313.98 Aligned_cols=256 Identities=25% Similarity=0.380 Sum_probs=201.1
Q ss_pred CCCCCceeecccCeEEEEEEeCC-C---cEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLGP-N---AVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.|++.+.||+|+||.||+|.... + ..||+|.+..........++..|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 47788999999999999997643 3 3699998855434445568999999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.++++... ..+++..++.++.|++.|++||| +.+++||||||+||+++.++.+|++|||++......
T Consensus 85 e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 85 EFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred ecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999997643 35899999999999999999999 899999999999999999999999999998866433
Q ss_pred CCCceeee---cccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccc
Q 001275 976 PASTTSIS---VVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDI 1051 (1109)
Q Consensus 976 ~~~~~~~~---~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
........ ...+..|+|||++.+..++.++||||+||++||+++ |..||..... .+...++...+ ...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~~~~----~~~-- 231 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIEQDY----RLP-- 231 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHHcCC----cCC--
Confidence 22111111 122457999999999999999999999999999886 9988864321 11222221100 000
Q ss_pred cchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1052 VDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1052 ~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
...+....+.+++.+||+.+|.+||+++++++.|+.+
T Consensus 232 ------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 232 ------------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0012234466788899999999999999999998765
No 177
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-34 Score=307.89 Aligned_cols=253 Identities=21% Similarity=0.309 Sum_probs=205.1
Q ss_pred hCCCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
.=|+..+.||+|.|+.|-.|+ .-+|++||||++.+.. +......+.+|++.|+.++|||||++|++.......|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 347778889999999999995 4689999999995443 33445678899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeee-CCCCcEEEecccCCcccCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILL-DSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll-~~~~~~kl~DfGla~~~~~~ 975 (1109)
.-++|+|+||+-++.. .+.++...+++.||+.|+.|+| +..+|||||||+||.+ ..-|-+|++|||++-.+..+
T Consensus 98 LGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred ecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 9999999999977553 4889999999999999999999 8999999999999966 56789999999999877654
Q ss_pred CCCceeeecccCcccccccccccCCCC-ccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKS-KESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
..- ...+|+..|.|||++.+..|+ +++||||+|||+|.+++|+.||....+. +.+--++|.
T Consensus 173 ~kL---~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS---------------ETLTmImDC 234 (864)
T KOG4717|consen 173 KKL---TTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS---------------ETLTMIMDC 234 (864)
T ss_pred chh---hcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch---------------hhhhhhhcc
Confidence 433 346899999999999999995 6899999999999999999999754221 112223333
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+..- +.... .+..+++..|+..||++|.+.+|++.+-|--
T Consensus 235 KYtv---PshvS---~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 235 KYTV---PSHVS---KECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred cccC---chhhh---HHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 2211 11122 3445567799999999999999999876543
No 178
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.4e-34 Score=322.96 Aligned_cols=267 Identities=23% Similarity=0.309 Sum_probs=202.2
Q ss_pred hCCCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecccccChHHHHHHHHHHhcCC-C-----CceeeEeeEEecCCce
Q 001275 819 ENLNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-H-----RNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~ 891 (1109)
-+|.+.+.||+|+||.|-+|. .++++.||||+++.. ..-..+...|+.++..++ | -|+|++++++...++.
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~--k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK--KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC--hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 378889999999999999994 567999999998543 333445677999999996 4 4899999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC--cEEEecccCC
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM--EPHISDFGIA 969 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~--~~kl~DfGla 969 (1109)
|+|+|.++. +|+++++.... ..++...+..++.||++||.+|| +.+|||+||||+|||+.+.+ .+||+|||.|
T Consensus 264 ciVfELL~~-NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 264 CIVFELLST-NLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eeeehhhhh-hHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccc
Confidence 999999965 99999998664 34899999999999999999999 99999999999999996543 6999999999
Q ss_pred cccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-----
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD----- 1044 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~----- 1044 (1109)
+.....-. .+..+..|+|||++.+.+|+.+.||||||||++||++|.+.| ++..+..++..++......
T Consensus 339 c~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLf-pG~ne~DQl~~I~e~lG~Pp~~mL 412 (586)
T KOG0667|consen 339 CFESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLF-PGDNEYDQLARIIEVLGLPPPKML 412 (586)
T ss_pred cccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCcccc-CCCCHHHHHHHHHHHhCCCCHHHH
Confidence 97654322 467888999999999999999999999999999999996555 4433333332222111100
Q ss_pred --ccccccccch-----------h-----------------hhHHhhh-------ch-hHHHHHHHHHHHHhccCCCCCC
Q 001275 1045 --TEEINDIVDL-----------S-----------------LMEEMLV-------SS-IRDQVIDVLLVALRCTEKKPSN 1086 (1109)
Q Consensus 1045 --~~~~~~~~d~-----------~-----------------~~~~~~~-------~~-~~~~~~~l~~l~~~cl~~dP~~ 1086 (1109)
......+++. . ......+ .. .......+++++.+|++.||.+
T Consensus 413 ~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~ 492 (586)
T KOG0667|consen 413 DTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAE 492 (586)
T ss_pred HhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchh
Confidence 0000011111 0 0000000 00 1133456788999999999999
Q ss_pred CCCHHHHHHHhh
Q 001275 1087 RPNMRDVVRQLV 1098 (1109)
Q Consensus 1087 RPs~~evl~~L~ 1098 (1109)
|+|+.|+++|-+
T Consensus 493 R~tp~qal~Hpf 504 (586)
T KOG0667|consen 493 RITPAQALNHPF 504 (586)
T ss_pred cCCHHHHhcCcc
Confidence 999999999864
No 179
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.5e-33 Score=311.44 Aligned_cols=260 Identities=19% Similarity=0.323 Sum_probs=205.6
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|++.+.||+|+||.||+|.. .+++.+|||.+.... ......++.+|+++++.++|+||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677888999999999999975 578999999875432 2223457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 896 RYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
||+++++|.+++.... ....+++..++.++.|+++|++||| +.+++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999987432 2345899999999999999999999 89999999999999999999999999999886643
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
... ......++..|+|||...+..++.++||||||+++|+|++|+.||.....+ ......... ....+
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~-------~~~~~ 226 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIE-------QCDYP 226 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhhh-------cCCCC
Confidence 321 122356889999999998888999999999999999999999998643221 111111110 00000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
... ......++.+++.+||+.+|++||||.+|++.+++.
T Consensus 227 ~~~-------~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 227 PLP-------SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCC-------cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 000 011234566788899999999999999999999875
No 180
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.5e-33 Score=310.80 Aligned_cols=254 Identities=26% Similarity=0.351 Sum_probs=200.3
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccc----cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK----RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
++|...+.||+|++|.||+|.. .+++.||+|.+...... .....+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788999999999999999965 46899999988543221 123568899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
|+||+++++|.+++.... .+++..+.+++.|++.|++||| +.+|+||||+|+||++++++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999987643 4788999999999999999999 8999999999999999999999999999997654
Q ss_pred CCCCCce-eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 974 KSPASTT-SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 974 ~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
....... .....++..|+|||.+.+..++.++||||+|+++|||++|+.||..... .... ........ ...+
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~-~~~~~~~~-~~~~- 228 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA----MAAI-FKIATQPT-NPQL- 228 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch----HHHH-HHHhccCC-CCCC-
Confidence 3221111 1234678899999999998899999999999999999999999854311 1111 11110000 0000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.......+.+++.+||+.+|++||++.|++++.
T Consensus 229 ------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 261 (263)
T cd06625 229 ------------PSHVSPDARNFLRRTFVENAKKRPSAEELLRHF 261 (263)
T ss_pred ------------CccCCHHHHHHHHHHhhcCcccCCCHHHHhhCC
Confidence 011223456678899999999999999999874
No 181
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.5e-34 Score=315.28 Aligned_cols=263 Identities=24% Similarity=0.377 Sum_probs=204.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCc----EEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNA----VFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
.+|+..+.||+|+||+||+|... +++ .+|+|.+..........++.+|++++++++|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788899999999999999754 233 5888887554444445678899999999999999999999987 78899
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
|+||+++|+|.++++... ..+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||.++...
T Consensus 86 v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~ 160 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD 160 (279)
T ss_pred EEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence 999999999999997643 24899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
............++..|+|||......++.++||||||+++||+++ |+.||..... .++...+.. . ... .
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~---~-~~~---~ 231 (279)
T cd05057 161 VDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLEK---G-ERL---P 231 (279)
T ss_pred CcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHhC---C-CCC---C
Confidence 3322222222334678999999988889999999999999999998 9999864321 112211111 0 000 0
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCCCCCCC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVPMTSKY 1108 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 1108 (1109)
. ......++.+++.+||..+|++||++.++++.+.++ ...+.+|
T Consensus 232 ~-----------~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~-~~~~~~~ 275 (279)
T cd05057 232 Q-----------PPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM-ARDPQRY 275 (279)
T ss_pred C-----------CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH-HhCCcce
Confidence 0 011123466788899999999999999999999987 3344443
No 182
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.6e-33 Score=310.00 Aligned_cols=251 Identities=25% Similarity=0.380 Sum_probs=201.5
Q ss_pred ceeecccCeEEEEEEeCC----CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLGP----NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.||+|+||.||+|.... +..||+|.+...........+.+|++.+.+++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999997654 7889999986544444467889999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCC------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 901 GSLRDVLHSITP------PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 901 gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
++|.+++..... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.+|++|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999987521 246899999999999999999999 89999999999999999999999999999987754
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
...........++..|+|||.+....++.++||||+|+++|||++ |+.||.... ..+... ..... . ..
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~---~~~~~-~---~~-- 226 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS--NEEVLE---YLRKG-Y---RL-- 226 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC--HHHHHH---HHHcC-C---CC--
Confidence 432222334567889999999988889999999999999999999 588886431 111111 11110 0 00
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
........++.+++.+|++.+|++||++.|++++|+
T Consensus 227 ---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 227 ---------PKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---------CCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000111345777888999999999999999999874
No 183
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.5e-33 Score=319.50 Aligned_cols=243 Identities=24% Similarity=0.309 Sum_probs=193.0
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.||+|+||+||+|... +++.||+|.+.... .......+.+|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999765 57899999986432 223345677888898888 799999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++....... .
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~ 152 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--T 152 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--c
Confidence 99999987643 4899999999999999999999 89999999999999999999999999999875322211 1
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...............
T Consensus 153 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~~~~i~~~~~~~~----------- 216 (318)
T cd05570 153 TSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DELFQSILEDEVRYP----------- 216 (318)
T ss_pred ccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHHHHHHHcCCCCCC-----------
Confidence 2234689999999999999999999999999999999999999964321 111111111110000
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNM-----RDVVRQ 1096 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~~ 1096 (1109)
.....++.+++.+||+.||++||++ .+++++
T Consensus 217 -----~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 217 -----RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred -----CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 0112345667889999999999999 888876
No 184
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.3e-33 Score=308.75 Aligned_cols=253 Identities=25% Similarity=0.355 Sum_probs=199.5
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|.+.+.||+|+||.||+|....+..+|+|.+... ......+.+|++++++++|+|++++++++. .+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPG--TMMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccC--CccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 468888999999999999998887778999987432 234467889999999999999999999875 45689999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.++++... ...+++..+..++.|+++|++||| +.+|+||||||+||++++++.++|+|||.+........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05069 83 GKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc-
Confidence 9999999997643 345789999999999999999999 89999999999999999999999999999986643321
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||...+..++.++|||||||++|||++ |+.||...... ........ ... . .
T Consensus 158 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~---~~~-~------~-- 223 (260)
T cd05069 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVER---GYR-M------P-- 223 (260)
T ss_pred cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc---CCC-C------C--
Confidence 11122346778999999988899999999999999999999 88887543211 11111110 000 0 0
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
........+.+++.+||+.+|++||+++++++.|++
T Consensus 224 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 ------CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ------CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 001123456678889999999999999999999875
No 185
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.9e-34 Score=330.93 Aligned_cols=202 Identities=25% Similarity=0.354 Sum_probs=171.6
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
.|...++||+|+||+||+|.. .+++.||+|++..... ......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 578889999999999999966 4688999999854321 2334578899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999987643 4788889999999999999999 8999999999999999999999999999975331100
Q ss_pred C---------------------------------------------CceeeecccCcccccccccccCCCCccCcchhhH
Q 001275 977 A---------------------------------------------STTSISVVGTIGYIAPENAFTTAKSKESDVYSYG 1011 (1109)
Q Consensus 977 ~---------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlG 1011 (1109)
. ........||+.|+|||++.+..++.++||||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 0 0001124699999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCC
Q 001275 1012 VVLLELITRKKALDPS 1027 (1109)
Q Consensus 1012 vil~elltg~~p~~~~ 1027 (1109)
|++|||++|+.||...
T Consensus 236 vil~elltG~~Pf~~~ 251 (382)
T cd05625 236 VILYEMLVGQPPFLAQ 251 (382)
T ss_pred HHHHHHHhCCCCCCCC
Confidence 9999999999999653
No 186
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.9e-34 Score=315.99 Aligned_cols=259 Identities=25% Similarity=0.328 Sum_probs=204.4
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|++.++||+|+||+||+|... +++.||+|++...........+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46777889999999999999764 58899999886554444567889999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++...+ .+++..+..++.+++.|+.|||+ ..+|+||||||+||++++++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred CCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 99999999987643 48999999999999999999993 2589999999999999999999999999987543221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCcccc------ccHHHHHHHhhcCccccccc
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKER------TDIVGWVRSVWSDTEEINDI 1051 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
.....|+..|+|||++.+..++.++|||||||++|++++|+.||....... ..+..++.......
T Consensus 159 ---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 229 (284)
T cd06620 159 ---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP------ 229 (284)
T ss_pred ---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc------
Confidence 123478999999999988889999999999999999999999997543211 01111111111100
Q ss_pred cchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1052 VDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1052 ~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.+.. .......++.+++.+|++.||++||+++|++++..-.
T Consensus 230 -~~~~-------~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 230 -PPRL-------PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred -CCCC-------CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 0000 0011234567788899999999999999999986444
No 187
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.7e-34 Score=333.75 Aligned_cols=255 Identities=23% Similarity=0.291 Sum_probs=194.5
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+|++.+.||+|+||.||+|+. .+++.||+|.+.... .......+.+|++++++++|+||+++++++.+++..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 688899999999999999965 458999999985432 12234568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|..+....
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999997643 4788888999999999999999 8999999999999999999999999999985331100
Q ss_pred C-----------------------------------------CceeeecccCcccccccccccCCCCccCcchhhHHHHH
Q 001275 977 A-----------------------------------------STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLL 1015 (1109)
Q Consensus 977 ~-----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ 1015 (1109)
. ........||+.|+|||++.+..++.++||||+||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0 00011347999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC---CHHH
Q 001275 1016 ELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP---NMRD 1092 (1109)
Q Consensus 1016 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---s~~e 1092 (1109)
||++|+.||....... ............ .. +. ..... .++.+++.+|+ .+|++|+ ++.|
T Consensus 236 ell~G~~Pf~~~~~~~-----~~~~i~~~~~~~-~~--~~------~~~~s---~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 236 EMLVGQPPFLADTPAE-----TQLKVINWETTL-HI--PS------QAKLS---REASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred ehhhCCCCCCCCCHHH-----HHHHHhccCccc-cC--CC------CCCCC---HHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 9999999996542211 111111000000 00 00 00111 22344555655 5999999 8999
Q ss_pred HHHHhh
Q 001275 1093 VVRQLV 1098 (1109)
Q Consensus 1093 vl~~L~ 1098 (1109)
+++|-+
T Consensus 298 ll~h~~ 303 (376)
T cd05598 298 IKAHPF 303 (376)
T ss_pred HhCCCC
Confidence 998844
No 188
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.4e-33 Score=309.93 Aligned_cols=251 Identities=24% Similarity=0.321 Sum_probs=197.4
Q ss_pred ceeecccCeEEEEEEeCC--C--cEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLGP--N--AVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|++|.||+|.+.. + ..||+|.+.........+++.+|++.+++++|+||+++++++.. ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999997643 3 36899988554433456689999999999999999999999988 889999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc-
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST- 979 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~- 979 (1109)
|+|.+++..... ..+++..++.++.|+++||+||| +.+++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 80 GSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 999999987542 45899999999999999999999 8999999999999999999999999999998765432211
Q ss_pred eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 980 TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
......++..|+|||++.+..++.++|||||||++|||++ |+.||...... +....... ... ....
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~---~~~---~~~~----- 222 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDK---EGE---RLER----- 222 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHh---cCC---cCCC-----
Confidence 1112457789999999998899999999999999999999 99998543211 11111111 000 0000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.......+.+++.+|++.+|++||++.|+++.|.+
T Consensus 223 ------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 223 ------PEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred ------CccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 01123456778889999999999999999998863
No 189
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=2e-33 Score=319.33 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=193.8
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+|+..+.||+|+||+||+|... +++.||+|.+..... ......+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999765 578999999864322 22334567788888777 5899999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999987643 4889999999999999999999 899999999999999999999999999999754322
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .. ...........
T Consensus 155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~---~~~i~~~~~~~------- 220 (323)
T cd05616 155 G--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--EL---FQSIMEHNVAY------- 220 (323)
T ss_pred C--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HH---HHHHHhCCCCC-------
Confidence 1 1223457999999999999999999999999999999999999999653211 11 11111110000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNM-----RDVVRQ 1096 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~~ 1096 (1109)
+ .....++.+++.+|++.||++|++. +++.+|
T Consensus 221 ------p---~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 221 ------P---KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred ------C---CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 0 0112345667789999999999974 666654
No 190
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.1e-33 Score=315.67 Aligned_cols=268 Identities=26% Similarity=0.371 Sum_probs=198.6
Q ss_pred hCCCCCceeecccCeEEEEEEe-----CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecC--Cce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-----GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 891 (1109)
++|+..+.||+|+||+||+|.. .+++.||+|++... .......+.+|++++++++||||+++++++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 4678889999999999999964 35789999987432 333456789999999999999999999987543 467
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++|+||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 89999999999999997543 34899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCCce-eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 972 LDKSPASTT-SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 972 ~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
......... .....++..|+|||+..+..++.++|||||||++|||++|..++...... +....... ... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~------~~~~~~~~-~~~-~ 229 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE------FMRMMGND-KQG-Q 229 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh------hhhhcccc-ccc-c
Confidence 643322111 11123445699999999888999999999999999999998765322110 11100000 000 0
Q ss_pred ccchhhhH----HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1051 IVDLSLME----EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1051 ~~d~~~~~----~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.....+.. ............++.+++.+||+.+|++||||+|+++.|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 230 MIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00000000 000000112234577888899999999999999999999865
No 191
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=1.8e-33 Score=308.69 Aligned_cols=251 Identities=26% Similarity=0.399 Sum_probs=202.1
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|...+.||+|++|.||+|... +++.|++|.+.... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677889999999999999764 68899999885432 334456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.++++... ...+++..++.++.|++.|+.||| +.+|+||||||+||++++++.++++|||+++.......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 99999999998642 345889999999999999999999 89999999999999999999999999999886644322
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......|++.|+|||+..+..++.++|||||||++|||++|+.||..... .. ........ ....+
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~---~~~~~~~~--~~~~~------ 221 (256)
T cd08529 157 --FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GA---LILKIIRG--VFPPV------ 221 (256)
T ss_pred --hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HH---HHHHHHcC--CCCCC------
Confidence 12234688999999999999999999999999999999999999864421 11 11111100 00000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......++.+++.+||+.+|++||++.|++++
T Consensus 222 -------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 222 -------SQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -------ccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 01123456778889999999999999999976
No 192
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2e-33 Score=314.28 Aligned_cols=267 Identities=24% Similarity=0.338 Sum_probs=194.2
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccccc-ChHHHHHHHHHHhcC---CCCceeeEeeEEecC-----C
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKR-GSLSMKREIQTIGKI---RHRNLVRLEDFWLRK-----D 889 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~-----~ 889 (1109)
+|++.+.||+|+||+||+|... +++.||+|.+....... ....+.+|+++++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778899999999999999665 68899999885433222 234566787777766 699999999987642 3
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
..++|+||+++ +|.+++.... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~-~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVDQ-DLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEccccc-CHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 47899999985 8999887643 245899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHh-------h
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSV-------W 1042 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~-------~ 1042 (1109)
+....... .....+|..|+|||++.+..++.++||||+||++|||++|+.||...... .......... |
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 156 RIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred ccccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhC
Confidence 86643221 12346889999999999989999999999999999999999998643221 1111111111 0
Q ss_pred cCcccc-ccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1043 SDTEEI-NDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1043 ~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
...... .....+... .......+....++.+++.+|++.||++||++.|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 232 PRDVTLPRGAFSPRGP-RPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccccccCCCCC-CchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000 000000000 00000011123446678889999999999999999976
No 193
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.7e-33 Score=319.98 Aligned_cols=243 Identities=24% Similarity=0.302 Sum_probs=188.3
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHH-HHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQ-TIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.||+|+||+||+|... +++.||+|++..... ......+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999764 689999999854321 222334555544 56788999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KT 152 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--Cc
Confidence 99999987533 4889999999999999999999 8999999999999999999999999999987542221 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~----~------- 216 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDNILNKPLRL----K------- 216 (323)
T ss_pred cccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcCCCCC----C-------
Confidence 234579999999999999999999999999999999999999986432 111111111111000 0
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHH----HHHHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMR----DVVRQ 1096 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~----evl~~ 1096 (1109)
......+.+++.+|++.||++||+++ |++++
T Consensus 217 -----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 217 -----PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred -----CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 01123456677899999999999884 66654
No 194
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.1e-33 Score=309.24 Aligned_cols=255 Identities=27% Similarity=0.366 Sum_probs=203.9
Q ss_pred hhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.++|.+.++||+|+||+||+|..++++.||||.+.. ......++.+|+.++++++|+||+++++++......++||||
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKP--GTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecC--CccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 367888999999999999999988888999998753 233456799999999999999999999999988899999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++.... ...+++..+..++.+++.|++||| +.+|+||||||+||++++++.+|++|||.+........
T Consensus 83 ~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (261)
T cd05034 83 MSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY 158 (261)
T ss_pred cCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence 99999999997643 245899999999999999999999 88999999999999999999999999999986643211
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
.......++..|+|||...+..++.++||||+|+++||+++ |+.||..... .... ........ .. .
T Consensus 159 -~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~---~~~~~~~~---~~-~--- 225 (261)
T cd05034 159 -TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--REVL---EQVERGYR---MP-R--- 225 (261)
T ss_pred -hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHH---HHHHcCCC---CC-C---
Confidence 11122345678999999998889999999999999999999 8888854311 1111 11111000 00 0
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
......++.+++.+|++.+|++||+++|+.+.|+.
T Consensus 226 --------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 226 --------PPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred --------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00112356778889999999999999999998875
No 195
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.8e-33 Score=311.46 Aligned_cols=250 Identities=22% Similarity=0.313 Sum_probs=193.0
Q ss_pred ceeecccCeEEEEEEeCC-Cc--EEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLGP-NA--VFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||.||+|...+ +. .+|+|.+...........+.+|++++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 368999999999997753 33 46888775433344456788999999999 899999999999999999999999999
Q ss_pred CCHHHHHhccC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 901 GSLRDVLHSIT-------------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 901 gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
|+|.++++... ....+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 99999997543 1234789999999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcc
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTE 1046 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
++...... ........+..|+|||++....++.++|||||||++|||++ |+.||..... . ......... .
T Consensus 158 l~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~---~~~~~~~~~-~ 228 (270)
T cd05047 158 LSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--A---ELYEKLPQG-Y 228 (270)
T ss_pred Cccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--H---HHHHHHhCC-C
Confidence 98632211 11111234567999999988889999999999999999997 9988854211 1 111111000 0
Q ss_pred ccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1047 EINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1047 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.. + .......++.+++.+||+.+|.+||++.|+++.|.++
T Consensus 229 ~~----~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 229 RL----E----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CC----C----------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 00 0 0011223567788899999999999999999999875
No 196
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.4e-33 Score=307.78 Aligned_cols=250 Identities=27% Similarity=0.380 Sum_probs=202.1
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|...+.||+|+||.||+|... ++.||+|.+..... ..+++.+|+.++++++|+||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 56888999999999999999876 78899998854332 4567899999999999999999999999889999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.++++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 83 AKGSLVDYLRSRG-RAVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred CCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 9999999997643 235899999999999999999999 89999999999999999999999999999986632211
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
....+..|+|||++.+..++.++||||||+++||+++ |+.||..... .++...+...+. . ..
T Consensus 158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~----~-~~------ 220 (256)
T cd05039 158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPHVEKGYR----M-EA------ 220 (256)
T ss_pred ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhcCCC----C-CC------
Confidence 2345678999999988889999999999999999997 8888854321 111111111000 0 00
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
......++.+++.+|++.+|++||+++|+++.|..+
T Consensus 221 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 221 -------PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -------ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 011234567788899999999999999999999753
No 197
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.9e-33 Score=308.75 Aligned_cols=248 Identities=21% Similarity=0.275 Sum_probs=193.8
Q ss_pred eeecccCeEEEEEEe---CCCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 826 VIGRGAHGIVYKASL---GPNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 826 ~lG~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
.||+|+||+||+|.+ .++..+|+|++...... ....++.+|+.++++++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999964 35788999987543322 23457889999999999999999999875 45678999999999
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc-e
Q 001275 902 SLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST-T 980 (1109)
Q Consensus 902 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~-~ 980 (1109)
+|.+++.... .+++..+..++.|++.|++|+| +.+|+||||||+||++++++.+||+|||+++......... .
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~ 154 (257)
T cd05116 81 PLNKFLQKNK---HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKA 154 (257)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeee
Confidence 9999997533 4889999999999999999999 8999999999999999999999999999998764432211 1
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHH
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEE 1059 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1059 (1109)
.....++..|+|||.+....++.++|||||||++|||++ |+.||..... ......+.. .... ..
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i~~----~~~~-~~-------- 219 (257)
T cd05116 155 KTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMIES----GERM-EC-------- 219 (257)
T ss_pred cCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHC----CCCC-CC--------
Confidence 112344678999999988888999999999999999998 8989864321 122222211 0000 00
Q ss_pred hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1060 MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1060 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+ .....++.+++.+||+.||++||++++|++.|+..
T Consensus 220 --~---~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 220 --P---QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred --C---CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 0 11224566788899999999999999999999875
No 198
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.1e-33 Score=328.13 Aligned_cols=267 Identities=20% Similarity=0.277 Sum_probs=197.3
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-----cee
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-----CGI 892 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 892 (1109)
+|+..++||+|+||+||+|.. .+++.||+|++.... .....+++.+|+++++.++|+||+++++++...+ ..|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999976 578999999885332 2233457889999999999999999999998776 789
Q ss_pred EEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCccc
Q 001275 893 IMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLL 972 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 972 (1109)
+|+||+. ++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSP---QPLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999997 5888877643 34899999999999999999999 899999999999999999999999999999865
Q ss_pred CCCCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccc
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDI 1051 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
..... .......+++.|+|||++.+. .++.++||||+||++|||++|+.||...... +....+........ ..++
T Consensus 154 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~g~~~-~~~~ 229 (372)
T cd07853 154 EPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI--QQLDLITDLLGTPS-LEAM 229 (372)
T ss_pred ccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHcCCCC-HHHH
Confidence 43221 122234688999999988774 4789999999999999999999999654211 11111111110000 0000
Q ss_pred ---------------cchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1052 ---------------VDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1052 ---------------~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
..+...... .........++.+++.+|++.||++|||++|+++|-+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 290 (372)
T cd07853 230 RSACEGARAHILRGPHKPPSLPVL-YTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPY 290 (372)
T ss_pred HHhhHHHHHHHHhCCCCCCchHHh-cccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHh
Confidence 000000000 0000111345677888999999999999999998743
No 199
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=319.18 Aligned_cols=249 Identities=26% Similarity=0.368 Sum_probs=194.6
Q ss_pred CceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCC
Q 001275 824 KHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGS 902 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 902 (1109)
.-++|+|.||+||-|+.. +...+|||.+..+ ..+..+-+..|+..-++++|+|||+++|.+.+++..-+.||-++||+
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpek-dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGS 658 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEK-DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGS 658 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccc-cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCc
Confidence 347999999999999765 4567899988543 33445567899999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeC-CCCcEEEecccCCcccCCCCCCcee
Q 001275 903 LRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLD-SEMEPHISDFGIAKLLDKSPASTTS 981 (1109)
Q Consensus 903 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~ 981 (1109)
|.+.++..=.+-.-.+...-.+.+||++||.||| ...|||||||-+|||++ -.|.+||+|||.++.+..- ....
T Consensus 659 LSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--nP~T 733 (1226)
T KOG4279|consen 659 LSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--NPCT 733 (1226)
T ss_pred HHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccC--Cccc
Confidence 9999987533333377778889999999999999 99999999999999995 5789999999999876432 2333
Q ss_pred eecccCcccccccccccC--CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHH
Q 001275 982 ISVVGTIGYIAPENAFTT--AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEE 1059 (1109)
Q Consensus 982 ~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1059 (1109)
..+.||..|||||++..+ .|+.++|||||||++.||.||++||....... ...++. ... +
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq---AAMFkV-----Gmy----------K 795 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ---AAMFKV-----GMY----------K 795 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh---Hhhhhh-----cce----------e
Confidence 457899999999999865 47899999999999999999999995432111 000000 001 0
Q ss_pred hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1060 MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1060 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
..++...+...+...++++|+.+||.+||+|+++++.
T Consensus 796 vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 796 VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 1111122333455668889999999999999999864
No 200
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-33 Score=324.53 Aligned_cols=269 Identities=21% Similarity=0.265 Sum_probs=196.8
Q ss_pred HhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-----
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD----- 889 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 889 (1109)
..++|...+.||+|+||.||+|.. .+++.||+|++.... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 347899999999999999999966 468999999985432 2334557889999999999999999999986543
Q ss_pred -ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccC
Q 001275 890 -CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGI 968 (1109)
Q Consensus 890 -~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 968 (1109)
..++||||+++ ++.+.++. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCC
Confidence 46999999975 56666643 2788889999999999999999 89999999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEI 1048 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1109)
++...... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .................
T Consensus 170 a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 170 ARTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQLGTPSAEF 245 (359)
T ss_pred ccccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCcHHH
Confidence 97543221 122357899999999999999999999999999999999999999643211 11111111000000000
Q ss_pred --------ccccc--h-----h---hhHHhh----hchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1049 --------NDIVD--L-----S---LMEEML----VSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1049 --------~~~~d--~-----~---~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
..... + . ...... .........++.+++.+|++.||++|||++|+++|-+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~ 317 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPY 317 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCch
Confidence 00000 0 0 000000 0000011245677888999999999999999999864
No 201
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.9e-33 Score=315.34 Aligned_cols=251 Identities=22% Similarity=0.339 Sum_probs=200.0
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|+||+++++++......++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC-cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 5788889999999999999975 568899999885433 33356788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 99 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred cCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 9999999998642 3789999999999999999999 89999999999999999999999999999876533221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......+++.|+|||...+..++.++|||||||++|+|++|+.||....... .+. ..+.... .....
T Consensus 172 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~-~~~~~~~--~~~~~---- 238 (296)
T cd06654 172 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALY-LIATNGT--PELQN---- 238 (296)
T ss_pred --ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHH-HHhcCCC--CCCCC----
Confidence 1223468899999999988889999999999999999999999996432211 111 1110000 00000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.......+.+++.+||+.+|++||++.|++++-
T Consensus 239 -------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~ 271 (296)
T cd06654 239 -------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQ 271 (296)
T ss_pred -------ccccCHHHHHHHHHHCcCCcccCcCHHHHhhCh
Confidence 011223466788899999999999999999864
No 202
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.4e-33 Score=311.93 Aligned_cols=269 Identities=21% Similarity=0.358 Sum_probs=199.2
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|+..+.||+|++|.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4777889999999999999764 689999998854332 22345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++ ++|.+++........+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 689999876554456899999999999999999999 8999999999999999999999999999987553321
Q ss_pred CceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHh-------hcCccccc
Q 001275 978 STTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSV-------WSDTEEIN 1049 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 1049 (1109)
.......+++.|+|||++.+. .++.++||||+||++|||++|+.||....... ......... |.......
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhcchhhH
Confidence 112234578899999987654 46899999999999999999999986432211 111111111 00000000
Q ss_pred c---ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1050 D---IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1050 ~---~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. .++ ................++.+++.+|++.||++||+++|++++
T Consensus 234 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 234 DYKNTFP-KWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HHHhhcc-ccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0 000 000000000001123456678889999999999999999876
No 203
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.6e-33 Score=307.69 Aligned_cols=249 Identities=23% Similarity=0.316 Sum_probs=195.8
Q ss_pred ceeecccCeEEEEEEeCC----CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLGP----NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||.||+|.... +..+|+|.+..........++.+|+++++++.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999996532 26899998865444445567899999999999999999999876 4568999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc-
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST- 979 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~- 979 (1109)
|+|.+++.... .+++..+..++.|+++|++||| ..+++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 80 GPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred CcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 99999997643 5899999999999999999999 8899999999999999999999999999998664332211
Q ss_pred eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 980 TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
......++..|+|||...+..++.++|||||||++|||++ |+.||..... .+...++.... .. . .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~----~~-~--~----- 219 (257)
T cd05060 154 ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGE----RL-P--R----- 219 (257)
T ss_pred cccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCC----cC-C--C-----
Confidence 1112234568999999998899999999999999999998 8998864321 22222221110 00 0 0
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......+.+++.+|++.+|++||++.|+++.|+++
T Consensus 220 ------~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 220 ------PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 011223566788899999999999999999999876
No 204
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.3e-33 Score=317.78 Aligned_cols=249 Identities=22% Similarity=0.268 Sum_probs=192.5
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||+||+|... +++.||+|++..... ......+.+|+.++.++ +||+|+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999764 578999999864322 23345678899999888 699999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DT 152 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--Cc
Confidence 99999886543 4899999999999999999999 8999999999999999999999999999987532221 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccc-cccHHHHHHHhhc-CccccccccchhhhH
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKE-RTDIVGWVRSVWS-DTEEINDIVDLSLME 1058 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~d~~~~~ 1058 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ......+...... ......
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p--------- 223 (327)
T cd05617 153 TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP--------- 223 (327)
T ss_pred eecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC---------
Confidence 23457999999999999999999999999999999999999999642211 1111111111110 000000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCC------HHHHHHHh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPN------MRDVVRQL 1097 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs------~~evl~~L 1097 (1109)
.....++.+++.+|++.||++|++ +.++++|-
T Consensus 224 -------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 224 -------RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred -------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 011233556778999999999998 46777663
No 205
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.6e-33 Score=311.74 Aligned_cols=252 Identities=24% Similarity=0.376 Sum_probs=196.3
Q ss_pred ceeecccCeEEEEEEeCC-------CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 825 HVIGRGAHGIVYKASLGP-------NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+.||+|+||.||+|+..+ ++.+|+|.+...........+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 358999999999997642 2578999875443334566788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-----cEEEecccC
Q 001275 898 MENGSLRDVLHSIT----PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-----EPHISDFGI 968 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-----~~kl~DfGl 968 (1109)
+++|+|.+++.... ....+++..++.++.|+++|++||| +.+++|+||||+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999997532 2234789999999999999999999 88999999999999999877 899999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
++...............++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~----~~~- 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVT----AGG- 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHh----cCC-
Confidence 986543322222223356788999999999999999999999999999998 8888853211 11111110 000
Q ss_pred cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1048 INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. .........+.+++.+||+.+|++||+++++++.|.+
T Consensus 231 --~~-----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 --RL-----------QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred --cc-----------CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 00 0011123456778889999999999999999998863
No 206
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=3.5e-33 Score=307.42 Aligned_cols=240 Identities=24% Similarity=0.346 Sum_probs=184.7
Q ss_pred ceeecccCeEEEEEEeCC-------------CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCce
Q 001275 825 HVIGRGAHGIVYKASLGP-------------NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 891 (1109)
+.||+|+||.||+|+... ...||+|.+... .......+.+|+.+++.++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-HRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 358999999999997532 235788876432 233445788899999999999999999999999999
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc-------EEEe
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME-------PHIS 964 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-------~kl~ 964 (1109)
++||||+++|+|..+++... ..+++..+++++.|+++|++||| +.+|+||||||+||+++.++. ++++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeC
Confidence 99999999999999887533 34899999999999999999999 899999999999999987654 8999
Q ss_pred cccCCcccCCCCCCceeeecccCcccccccccc-cCCCCccCcchhhHHHHHHHH-hCCCCCCCCccccccHHHHHHHhh
Q 001275 965 DFGIAKLLDKSPASTTSISVVGTIGYIAPENAF-TTAKSKESDVYSYGVVLLELI-TRKKALDPSYKERTDIVGWVRSVW 1042 (1109)
Q Consensus 965 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~ell-tg~~p~~~~~~~~~~~~~~~~~~~ 1042 (1109)
|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.|+...... .. ....
T Consensus 155 d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~-~~~~ 222 (262)
T cd05077 155 DPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA-----EK-ERFY 222 (262)
T ss_pred CCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh-----HH-HHHH
Confidence 99998755322 1245788999999886 466899999999999999998 577776432111 00 0000
Q ss_pred cCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1043 SDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1043 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.... .. ......++.+++.+||+.||++||+++|+++++.
T Consensus 223 ~~~~---~~-------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 223 EGQC---ML-------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred hcCc---cC-------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 0000 00 0011235677888999999999999999998863
No 207
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3e-33 Score=309.01 Aligned_cols=260 Identities=24% Similarity=0.379 Sum_probs=205.5
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|++.+.||.|+||+||+|.. .++..+|+|++...........+.+|+++++.++|+||+++++.+...+..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 3688899999999999999975 467889999886544444567899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.++++.......+++..+..++.|++.|++||| +.+|+||||+|+||++++++.++++|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999986544356899999999999999999999 89999999999999999999999999999886654332
Q ss_pred Cc--eeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 978 ST--TSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 978 ~~--~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.. ......|+..|+|||++... .++.++|+|||||++|||++|+.||...... ........ .........
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~---~~~~~~~~~--- 230 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLMLTLQ---NDPPSLETG--- 230 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHHHhc---CCCCCcCCc---
Confidence 21 22334688999999988777 7899999999999999999999998643221 11111111 100000000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. ........+.+++.+|++.||++||+++|+++|
T Consensus 231 -----~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 231 -----A---DYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred -----c---ccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 011223456678889999999999999999986
No 208
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.7e-33 Score=312.32 Aligned_cols=254 Identities=26% Similarity=0.330 Sum_probs=198.3
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
|+..++||+|+||+||+|... +++.||+|.+...... .....+.+|+.++++++|++++++++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667788999999999999664 6889999988543322 2234577899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++|+|.+++.... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 156 (285)
T cd05630 82 MNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 156 (285)
T ss_pred cCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc-
Confidence 99999999986533 234889999999999999999999 8999999999999999999999999999987653222
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......|+..|+|||++.+..++.++||||+||++|||++|+.||........ .......... . .
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~--~~~~~~~~~~---~--------~ 221 (285)
T cd05630 157 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REEVERLVKE---V--------Q 221 (285)
T ss_pred --cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch--HHHHHhhhhh---h--------h
Confidence 11234789999999999999999999999999999999999999965322110 0000000000 0 0
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN-----MRDVVRQLV 1098 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~L~ 1098 (1109)
. ... .....++.+++.+|++.||++||+ ++|+++|-+
T Consensus 222 ~-~~~---~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~ 263 (285)
T cd05630 222 E-EYS---EKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPL 263 (285)
T ss_pred h-hcC---ccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChh
Confidence 0 000 111234567788999999999999 899998644
No 209
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-33 Score=327.08 Aligned_cols=269 Identities=22% Similarity=0.271 Sum_probs=200.2
Q ss_pred hCCCCCceeecccCeEEEEEEeC---CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG---PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.+|.+.+.||+|+||.||+|... .++.||+|.+... ....+|++++++++||||+++++++......++||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 57899999999999999999653 3577899977321 24568999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+. ++|.+++... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++.....
T Consensus 166 e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 166 PKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred hhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9996 6898888543 35899999999999999999999 899999999999999999999999999999866544
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCcccc--ccHHHHHHHhhcCccccccccc
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKER--TDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
..........||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..+...++...........-..
T Consensus 239 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~ 318 (392)
T PHA03207 239 PDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGS 318 (392)
T ss_pred cccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccc
Confidence 33333334679999999999999999999999999999999999999996532211 1111111111110000000000
Q ss_pred hhh-----------hHHhhhch-h--HHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1054 LSL-----------MEEMLVSS-I--RDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1054 ~~~-----------~~~~~~~~-~--~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
..+ ......+. . .....++.+++.+|++.||++||++.|++.|=.-.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~ 379 (392)
T PHA03207 319 TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFT 379 (392)
T ss_pred hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhh
Confidence 000 00000000 0 01123566788899999999999999999985443
No 210
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.4e-33 Score=305.65 Aligned_cols=249 Identities=24% Similarity=0.307 Sum_probs=196.4
Q ss_pred ceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCHH
Q 001275 825 HVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSLR 904 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 904 (1109)
++||+|+||.||+|...+++.||+|.+...........+.+|++++++++|+||+++++++......++|+||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999887799999998855443334567899999999999999999999999999999999999999999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeec
Q 001275 905 DVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISV 984 (1109)
Q Consensus 905 ~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 984 (1109)
+++.... ..+++..+..++.+++.|++||| +.+++||||||+||+++.++.++|+|||++...............
T Consensus 81 ~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~ 155 (251)
T cd05041 81 TFLRKKK--NRLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLK 155 (251)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccC
Confidence 9997643 24789999999999999999999 899999999999999999999999999999865432211111122
Q ss_pred ccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 985 VGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 985 ~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
.++..|+|||.+.+..++.++||||+||++|||++ |..||..... ......+.. .. ....
T Consensus 156 ~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--~~~~~~~~~----~~---~~~~---------- 216 (251)
T cd05041 156 QIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQTRERIES----GY---RMPA---------- 216 (251)
T ss_pred cceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--HHHHHHHhc----CC---CCCC----------
Confidence 34667999999988899999999999999999999 7777743321 111111110 00 0000
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
......++.+++.+|++.+|++||++.|+++.|.
T Consensus 217 -~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 217 -PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred -CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 0112335777888999999999999999999885
No 211
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.5e-33 Score=307.55 Aligned_cols=251 Identities=20% Similarity=0.333 Sum_probs=201.0
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
+|++.++||+|+||.||++... +++.||+|.+.........+.+.+|+.++++++|+||+++++++..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4777899999999999999764 688999998865444455667889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.+++.... ...+++..+..++.|++.|++||| +.+|+|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 81 DGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc-
Confidence 9999999887533 234788999999999999999999 89999999999999999999999999999976643221
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
......|++.|+|||+..+..++.++|+||||+++|+|++|+.||.... ............ .... .
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~~--~~~~-~----- 221 (255)
T cd08219 156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILKVCQGS--YKPL-P----- 221 (255)
T ss_pred -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHHHhcCC--CCCC-C-----
Confidence 1223568899999999998889999999999999999999999986431 111111111110 0000 0
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.....++.+++.+||+.||++||+++|++..
T Consensus 222 -------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 222 -------SHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0112345678889999999999999999864
No 212
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.4e-33 Score=317.80 Aligned_cols=257 Identities=25% Similarity=0.378 Sum_probs=199.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCc----EEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNA----VFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
++|+..+.||+|+||.||+|... ++. .||+|.+..........++.+|+.++++++||||++++++|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46778889999999999999753 343 46888775443333345788999999999999999999998754 5679
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
++||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 86 v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEcccccccccc
Confidence 999999999999987643 34789999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
............++..|+|||++.+..++.++|||||||++||+++ |+.||..... .....++.. .....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~----~~~~~--- 231 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEK----GERLP--- 231 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHC----CCCCC---
Confidence 3322222223456778999999998999999999999999999997 8888854321 112222111 10000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
. ......++.+++.+||..+|++||+++|+++.+.++.
T Consensus 232 ~-----------~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 232 Q-----------PPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred C-----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0 0112235677888999999999999999999998863
No 213
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=9.5e-34 Score=311.68 Aligned_cols=254 Identities=31% Similarity=0.442 Sum_probs=197.9
Q ss_pred CCCCceeecccCeEEEEEEeCC-CcEEEEEEeeecccccCh-HHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 821 LNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKRGS-LSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
|+..+.||+|+||+||++.... ++.||+|.+......... ....+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 4567899999999999997754 568999998654433322 23456999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.+++.... .+++..+..++.|+++||+||| +.+|+|+||||+||++++++.++|+|||.+..... ..
T Consensus 81 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~~ 152 (260)
T PF00069_consen 81 PGGSLQDYLQKNK---PLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--NN 152 (260)
T ss_dssp TTEBHHHHHHHHS---SBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS--TT
T ss_pred ccccccccccccc---cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc--cc
Confidence 9999999998333 4899999999999999999999 88999999999999999999999999999986421 22
Q ss_pred ceeeecccCcccccccccc-cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAF-TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||++. +..++.++||||+|+++|+|++|+.||..... .+......... .....
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~~~----------~~~~~ 220 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEKIL----------KRPLP 220 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHHHH----------HTHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhhhcc----------ccccc
Confidence 2333467899999999988 78889999999999999999999999875410 11111111100 00000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
... ........++.+++.+|++.||++||++.|++++
T Consensus 221 ~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 221 SSS--QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HHT--TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred ccc--cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000 0001112567788889999999999999999976
No 214
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.2e-33 Score=322.77 Aligned_cols=261 Identities=22% Similarity=0.292 Sum_probs=198.6
Q ss_pred HHHHHhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC
Q 001275 813 QVIEATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD 889 (1109)
Q Consensus 813 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 889 (1109)
+.....++|.+.+.||+|+||.||+|... +++.||+|.+.... .......+.+|+.+++.++||||+++++++...+
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 33445588999999999999999999765 57889999885422 2223445788999999999999999999999999
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
..++||||+++|+|.+++... .++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 999999999999999998753 2788888999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCcccccccccccCC----CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAFTTA----KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
+....... .......||+.|+|||++.+.. ++.++||||+||++|||++|+.||..... ...........
T Consensus 190 ~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~ 263 (371)
T cd05622 190 MKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMNHK 263 (371)
T ss_pred eEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCC
Confidence 86643221 1223457999999999887543 78999999999999999999999964321 11111111111
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHhh
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSN--RPNMRDVVRQLV 1098 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~L~ 1098 (1109)
... .+.+ .......+.+++.+|++.++.+ ||+++|+++|.+
T Consensus 264 ~~~-~~~~-----------~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 264 NSL-TFPD-----------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred Ccc-cCCC-----------cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 000 0000 0011223445667888744443 789999999864
No 215
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.2e-33 Score=315.97 Aligned_cols=270 Identities=19% Similarity=0.302 Sum_probs=200.4
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|...++||+|+||.||+|... +++.||+|.+...........+.+|++++++++|+||+++++++...+..++|+||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56888999999999999999764 57899999986554444456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++ ++|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++........
T Consensus 86 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 159 (301)
T cd07873 86 LD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK 159 (301)
T ss_pred cc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence 97 59999887543 34789999999999999999999 89999999999999999999999999999975433221
Q ss_pred CceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC--ccccccccc-
Q 001275 978 STTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD--TEEINDIVD- 1053 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d- 1053 (1109)
......+++.|+|||.+.+. .++.++||||+||++|||++|+.||...... .....+...... ......+..
T Consensus 160 --~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 235 (301)
T cd07873 160 --TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSN 235 (301)
T ss_pred --cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhcc
Confidence 12234678899999987654 4788999999999999999999998654221 111111111100 000000000
Q ss_pred --------hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1054 --------LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1054 --------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
+................++.+++.+|++.||.+|||++|+++|-+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~ 288 (301)
T cd07873 236 EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288 (301)
T ss_pred ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 000000000000111234667888999999999999999998654
No 216
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.1e-33 Score=313.40 Aligned_cols=272 Identities=25% Similarity=0.331 Sum_probs=203.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC-----CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEec--CCce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-----PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR--KDCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~ 891 (1109)
+.|...+.||+|+||.||+|... +++.||||.+...........+.+|++++++++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45677789999999999999753 4688999998544333345689999999999999999999999877 5578
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++|||.+..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 99999999999999997643 24899999999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCCc-eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 972 LDKSPAST-TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 972 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
........ ......++..|+|||...+..++.++||||||+++|||++|+.|+............ .. ........
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~---~~-~~~~~~~~ 234 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIG---IA-QGQMIVTR 234 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccc---cc-cccccHHH
Confidence 65332211 111234566799999998889999999999999999999999987543221111000 00 00000000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+ ...+..............++.+++.+|++.+|++||+|.|++++|..+
T Consensus 235 ~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 235 L-LELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred H-HHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0 000000000000112235677889999999999999999999999875
No 217
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=299.17 Aligned_cols=250 Identities=22% Similarity=0.320 Sum_probs=204.1
Q ss_pred CCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEecc
Q 001275 821 LNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
|++..+||+|+||.||+|.+ ..|+++|||++.. +.+.+++.+|+.+|.+++.|+||++||.|......++|||||.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV---~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV---DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc---cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 55677899999999999955 5699999998854 3456788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
-|+..|+++..+ .++++.++..++..-++||+||| ...-+|||||+.|||++.+|.+|++|||+|..+.+...
T Consensus 112 AGSiSDI~R~R~--K~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA-- 184 (502)
T KOG0574|consen 112 AGSISDIMRARR--KPLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA-- 184 (502)
T ss_pred CCcHHHHHHHhc--CCccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH--
Confidence 999999998654 46999999999999999999999 78889999999999999999999999999987654322
Q ss_pred eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHH
Q 001275 980 TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEE 1059 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1059 (1109)
......||+-|||||++..-.|+.++||||+|++..||.-|++||..-..-. .++--.-.+.
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR------------------AIFMIPT~PP 246 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR------------------AIFMIPTKPP 246 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc------------------eeEeccCCCC
Confidence 2234689999999999999999999999999999999999999986432111 1000000000
Q ss_pred hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1060 MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1060 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
...........++-+++..|+-..|++|.|+.++++|-.
T Consensus 247 PTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~F 285 (502)
T KOG0574|consen 247 PTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTF 285 (502)
T ss_pred CCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhh
Confidence 111112334456677888999999999999999998854
No 218
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.6e-33 Score=305.55 Aligned_cols=249 Identities=26% Similarity=0.332 Sum_probs=197.1
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEe-cCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWL-RKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~ 897 (1109)
++|...+.||+|+||.||+|... ++.||+|.+.. ....+.+.+|+.++++++|+|++++++++. .++..++|+||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKN---DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCC---CchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 46888899999999999999776 77889998742 233557889999999999999999999765 44568999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++|+|.++++... ...+++..+.+++.|++.|++||| +.+|+||||||+||++++++.+|++|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 157 (256)
T cd05082 82 MAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD 157 (256)
T ss_pred CCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence 99999999997643 335889999999999999999999 89999999999999999999999999999885533221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
...++..|+|||++.+..++.++|||||||++|||++ |+.||... .............. ...
T Consensus 158 -----~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~--~~~----- 220 (256)
T cd05082 158 -----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGYK--MDA----- 220 (256)
T ss_pred -----CCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCCC--CCC-----
Confidence 2345678999999998889999999999999999998 88887532 11112111111000 000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......+.+++.+|++.+|++||++.++++.|.++
T Consensus 221 --------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 221 --------PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred --------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 011234566788899999999999999999998763
No 219
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.5e-33 Score=316.00 Aligned_cols=197 Identities=27% Similarity=0.420 Sum_probs=160.4
Q ss_pred CceeecccCeEEEEEEeC---CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEec--CCceeEEEEec
Q 001275 824 KHVIGRGAHGIVYKASLG---PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR--KDCGIIMYRYM 898 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 898 (1109)
.++||+|+||+||+|... +++.||+|.+... .....+.+|++++++++||||+++++++.. ....++|+||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC---CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 467999999999999764 4678999987432 223467899999999999999999998864 34578999998
Q ss_pred cCCCHHHHHhccC------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeee----CCCCcEEEecccC
Q 001275 899 ENGSLRDVLHSIT------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILL----DSEMEPHISDFGI 968 (1109)
Q Consensus 899 ~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~DfGl 968 (1109)
++ +|.+++.... ....+++..+..++.|+++||+||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 83 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 64 8888875422 1235889999999999999999999 8999999999999999 4567899999999
Q ss_pred CcccCCCCCC-ceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 969 AKLLDKSPAS-TTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 969 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
++........ .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9876443221 122345789999999988774 5799999999999999999999999643
No 220
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.1e-33 Score=318.02 Aligned_cols=239 Identities=26% Similarity=0.310 Sum_probs=184.0
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHH-HHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQ-TIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.||+|+||+||+|... +++.||+|++..... ......+.+|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999765 578899999854322 122334444444 56788999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+.+..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~ 152 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GT 152 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CC
Confidence 99999997633 3778888899999999999999 8999999999999999999999999999997543221 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... .............. .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~----~------- 216 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNILNKPLQL----K------- 216 (325)
T ss_pred cccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHHHHhCCcCC----C-------
Confidence 2345799999999999999999999999999999999999999964321 11111111110000 0
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRD 1092 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~e 1092 (1109)
... ...+.+++.+|++.||++||++.+
T Consensus 217 --~~~---~~~~~~li~~~l~~~p~~R~~~~~ 243 (325)
T cd05602 217 --PNI---TNSARHLLEGLLQKDRTKRLGAKD 243 (325)
T ss_pred --CCC---CHHHHHHHHHHcccCHHHCCCCCC
Confidence 011 223456777999999999998763
No 221
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.4e-33 Score=309.53 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=204.6
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
..|+..++||+|+||.||+|... +++.||+|.+...........+.+|++++++++|+||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35667788999999999999764 58899999886544445566789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++|+|.+++... .+++..+..++.|+++|++|+| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 84 LGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 9999999998652 3788899999999999999999 89999999999999999999999999999976643221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......++..|+|||++.+..++.++|||||||++|||++|+.||....... ...... .. . .+
T Consensus 157 --~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~~~~~-~~-~-----~~--- 219 (277)
T cd06640 157 --KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-----VLFLIP-KN-N-----PP--- 219 (277)
T ss_pred --ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-----Hhhhhh-cC-C-----CC---
Confidence 1223467889999999988889999999999999999999999986432110 000000 00 0 00
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCC
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVP 1103 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1103 (1109)
.........+.+++.+||+.+|++||+++|++++-.-....
T Consensus 220 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 220 -----TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred -----CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 01122345567788899999999999999999886544333
No 222
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=8.3e-33 Score=304.66 Aligned_cols=252 Identities=25% Similarity=0.346 Sum_probs=191.1
Q ss_pred ceeecccCeEEEEEEeC----CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEe-cCCceeEEEEecc
Q 001275 825 HVIGRGAHGIVYKASLG----PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWL-RKDCGIIMYRYME 899 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 899 (1109)
+.||+|+||.||+|... ....||+|++...........+.+|+.+++.++||||+++++++. .++..++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999753 245789998743333344567889999999999999999999876 4556799999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC-
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS- 978 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~- 978 (1109)
+|+|.+++.... ...++..+..++.|+++|++||| +.+|+||||||+||++++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 81 HGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 999999997543 23678888999999999999999 889999999999999999999999999999765332111
Q ss_pred -ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 -TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 -~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||...+..++.++|||||||++|||++|+.|+..... ............... .
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~----~~~~~~~~~~~~~~~----~---- 223 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD----SFDITVYLLQGRRLL----Q---- 223 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC----HHHHHHHHhcCCCCC----C----
Confidence 111223567789999999888999999999999999999996554332211 111222211111000 0
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......+.+++.+||+.+|++||++.|+++.|+++
T Consensus 224 -------~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 224 -------PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred -------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 001123467788899999999999999999999876
No 223
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.1e-33 Score=306.22 Aligned_cols=255 Identities=20% Similarity=0.234 Sum_probs=185.9
Q ss_pred ceeecccCeEEEEEEeCCC---cEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 825 HVIGRGAHGIVYKASLGPN---AVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
+.||+|+||+||+|...++ ..+++|.+...........+.+|+..++.++||||++++++|......++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3599999999999965433 3456666544333344568999999999999999999999999999999999999999
Q ss_pred CHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 902 SLRDVLHSITP-PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 902 sL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
+|.++++.... ....++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||++...........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 99999976432 234667778899999999999999 88999999999999999999999999999864322222222
Q ss_pred eeecccCccccccccccc-------CCCCccCcchhhHHHHHHHHhC-CCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 981 SISVVGTIGYIAPENAFT-------TAKSKESDVYSYGVVLLELITR-KKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~-------~~~~~~sDvwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
.....++..|+|||+... ..++.++|||||||++|||+++ ..||.... . ........... .....
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-~----~~~~~~~~~~~--~~~~~ 230 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS-D----REVLNHVIKDQ--QVKLF 230 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-H----HHHHHHHHhhc--ccccC
Confidence 234568899999998753 2457899999999999999975 55664321 1 11111111110 01111
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
++.... .. ..++.+++..|| .+|++||+++|+++.|.
T Consensus 231 ~~~~~~-----~~---~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLEL-----PY---SERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccCC-----CC---cHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111110 11 233555677899 67999999999998874
No 224
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.5e-33 Score=317.08 Aligned_cols=243 Identities=23% Similarity=0.293 Sum_probs=187.2
Q ss_pred ceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHH-HHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQ-TIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
++||+|+||.||+|+.. +++.||+|++..... ......+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999764 688999999854321 222334555554 57889999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++... ..+.+..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~ 152 (321)
T cd05603 81 GELFFHLQRE---RCFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ET 152 (321)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--Cc
Confidence 9999888653 24788889999999999999999 8999999999999999999999999999987532221 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||.... ...............
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~------------ 215 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNILHKPLQL------------ 215 (321)
T ss_pred cccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHHhcCCCCC------------
Confidence 234578999999999999899999999999999999999999996532 111111111111000
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHH----HHHHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMR----DVVRQ 1096 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~----evl~~ 1096 (1109)
. .....++.+++.+|++.||++||++. |++++
T Consensus 216 -~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 216 -P---GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred -C---CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 0 01123456678899999999999763 55544
No 225
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3e-33 Score=308.76 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=198.6
Q ss_pred CCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccc-----cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHK-----RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
+|...+.||+|+||+||+|...+++.+|+|.+...... .....+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47788999999999999998888999999988543221 2234688999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
+||+++++|.+++.... .+++..+..++.|++.|++||| +.+|+|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997643 3789999999999999999999 88999999999999999999999999999876532
Q ss_pred CCC----CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 975 SPA----STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 975 ~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
... ........++..|+|||+..+..++.++||||+||++|+|++|+.||...... ...... .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-~~~~~~----~~~~~~~~~ 229 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-AAMFYI----GAHRGLMPR 229 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH-HHHHHh----hhccCCCCC
Confidence 111 11112346889999999999888999999999999999999999998643111 111000 000000000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. .. ....++.+++.+|++.+|++||++.|++++
T Consensus 230 ~----------~~---~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 230 L----------PD---SFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred C----------CC---CCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0 01 122345667889999999999999999875
No 226
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=3.8e-33 Score=306.22 Aligned_cols=250 Identities=23% Similarity=0.343 Sum_probs=200.6
Q ss_pred hCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|+..++||+|+||.||+|.... ++.||+|.+..... ..++.+|++++++++|+||+++++++......++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 578889999999999999998764 78999998854322 66899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++.... ..+++..+..++.|+++|++||| +.+|+|||++|+||++++++.++|+|||++........
T Consensus 80 ~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 80 CGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 99999999987533 35899999999999999999999 88999999999999999999999999999986643321
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......++..|+|||++.+..++.++|||||||++|+|++|+.||........ .. ..... ..... .
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~----~~-~~~~~--~~~~~-~---- 220 (256)
T cd06612 155 --KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA----IF-MIPNK--PPPTL-S---- 220 (256)
T ss_pred --ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh----hh-hhccC--CCCCC-C----
Confidence 22234588899999999988999999999999999999999999864321110 00 00000 00000 0
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.......++.+++.+|++.+|++||++.|++++
T Consensus 221 ------~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 221 ------DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred ------chhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 001122346678889999999999999999875
No 227
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.6e-33 Score=306.41 Aligned_cols=252 Identities=22% Similarity=0.346 Sum_probs=200.2
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
.+|+..+.||+|+||.||+|...+++.+|+|.+.. .......+.+|++++++++|||++++++++......++|+||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIRE--GAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCC--CCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 45777899999999999999887788999998742 2334567899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.+++.... ..++++.+..++.+++.|++||| +.+++||||||+||+++.++.++|+|||+++.......
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 155 (256)
T cd05112 82 EHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY- 155 (256)
T ss_pred CCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcc-
Confidence 9999999987543 34789999999999999999999 88999999999999999999999999999876543211
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++.+|+|||...+..++.++||||+|+++|||++ |+.||..... ........... ....+.
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~----~~~~~~-- 224 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVETINAGF----RLYKPR-- 224 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHHhCCC----CCCCCC--
Confidence 11122345678999999998899999999999999999998 8888854321 11111111000 000111
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
....++.+++.+||+.+|++||+++|++++|.
T Consensus 225 ---------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 ---------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ---------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 11245777889999999999999999999873
No 228
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=5.1e-33 Score=315.67 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=193.2
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+|+..+.||+|+||+||+|... +++.||+|++.... .......+..|.+++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999764 68899999986432 2233456778888888885 577888999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999987643 4889999999999999999999 899999999999999999999999999998754322
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ..............
T Consensus 155 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~-----~~~~~i~~~~~~~p------ 221 (323)
T cd05615 155 G--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED-----ELFQSIMEHNVSYP------ 221 (323)
T ss_pred C--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCCCCCC------
Confidence 1 1222356899999999999999999999999999999999999999653211 11111111100000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHH
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNM-----RDVVRQ 1096 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~-----~evl~~ 1096 (1109)
.....++.+++.+|++.+|++|++. +|+.+|
T Consensus 222 ----------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 222 ----------KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred ----------ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 0112345667789999999999974 555554
No 229
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.7e-33 Score=305.56 Aligned_cols=253 Identities=22% Similarity=0.372 Sum_probs=200.9
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|++.++||+|+||.||+|...++..+|+|.+... ......+.+|++++++++|+||+++++++.. ...+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 578889999999999999999888888999987432 3345678899999999999999999999877 7789999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.+++.... ....++..++.++.|++.|++||| +.+++||||||+||+++.++.+|++|||.+........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 157 (260)
T cd05073 83 AKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 157 (260)
T ss_pred CCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence 9999999997643 345789999999999999999999 88999999999999999999999999999976543221
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.......++..|+|||++....++.++|+|||||++|++++ |+.||..... .+........+ .. .
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~----~~-~------- 223 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGY----RM-P------- 223 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhCCC----CC-C-------
Confidence 11222346678999999998889999999999999999999 8888754211 11111111100 00 0
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.......++.+++.+|++.+|++||++.++.+.|..
T Consensus 224 ------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 ------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001122356778889999999999999999999875
No 230
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-33 Score=320.50 Aligned_cols=193 Identities=21% Similarity=0.296 Sum_probs=164.7
Q ss_pred HHhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
....+|.+.+.||+|+||.||+|... +++.||+|.... .....|+.++++++|+||+++++++...+..++|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 33467999999999999999999765 467888886421 1235699999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
+||+. |+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 136 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 99995 58998886533 35899999999999999999999 89999999999999999999999999999975432
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCC
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKAL 1024 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~ 1024 (1109)
. .......||+.|+|||++.+..++.++|||||||++|||+++..++
T Consensus 210 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 210 A---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred C---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 2 1223357899999999999999999999999999999999976665
No 231
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=8.8e-33 Score=308.27 Aligned_cols=252 Identities=25% Similarity=0.321 Sum_probs=197.2
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
|+..+.||+|+||+||+|... +++.||+|.+...... .....+.+|++++++++|++|+++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999664 6889999988543222 2234577899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++|+|.+++.... ...+++..+..++.|++.|+.||| +.+|+||||||+||++++++.++|+|||++.......
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05632 82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE- 156 (285)
T ss_pred ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC-
Confidence 99999999886533 235899999999999999999999 8999999999999999999999999999997653221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......|+..|+|||++.+..++.++|+||+||++|||++|+.||...... .....+......... ..
T Consensus 157 --~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-~~~~~~~~~~~~~~~----~~----- 224 (285)
T cd05632 157 --SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-VKREEVDRRVLETEE----VY----- 224 (285)
T ss_pred --cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhhcccc----cc-----
Confidence 122357899999999999999999999999999999999999999643211 111111111100000 00
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHH
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN-----MRDVVRQ 1096 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~ 1096 (1109)
......++.+++.+|++.||++||+ ++|++++
T Consensus 225 -------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 225 -------SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred -------CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 0111234566788999999999999 7788876
No 232
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.7e-33 Score=307.06 Aligned_cols=258 Identities=25% Similarity=0.317 Sum_probs=197.1
Q ss_pred HHHhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 815 IEATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 815 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
..+++++.....||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|+||+++++++..++..++
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPER-DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCC-CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 345566777788999999999999754 5788999987433 23345678999999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-CCcEEEecccCCccc
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-EMEPHISDFGIAKLL 972 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfGla~~~ 972 (1109)
|+||+++++|.++++........++..+..++.|+++|++||| +.+|+||||||+||+++. ++.++|+|||.+...
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 9999999999999976432222378888899999999999999 899999999999999976 678999999998765
Q ss_pred CCCCCCceeeecccCcccccccccccCC--CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFTTA--KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
..... ......++..|+|||++.+.. ++.++||||+|+++|+|++|+.||........ ..+........
T Consensus 160 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~----- 230 (268)
T cd06624 160 AGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVGMFKIH----- 230 (268)
T ss_pred ccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhhhhccC-----
Confidence 33221 122346889999999886543 78899999999999999999999854211110 00000000000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
+. .......++.+++.+||+.+|++||++.|+++|
T Consensus 231 ---~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 231 ---PE--------IPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ---CC--------CCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 00 001122346678889999999999999999986
No 233
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=312.27 Aligned_cols=249 Identities=27% Similarity=0.380 Sum_probs=197.7
Q ss_pred CCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 821 LNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
|...+.||.|+||.||-|+. .+.++||||++...... +...++.+|+.++.+++|||+|.+-|||..+...++||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 44456699999999999955 56889999999665433 3346899999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
|-| +-.|++.-.+. ++.+.++..|..|.+.||+||| +.+.||||||+.|||+++.|.||++|||.|.++...
T Consensus 108 ClG-SAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-- 179 (948)
T KOG0577|consen 108 CLG-SASDLLEVHKK--PLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-- 179 (948)
T ss_pred Hhc-cHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCch--
Confidence 964 88888766443 4888899999999999999999 999999999999999999999999999999876432
Q ss_pred CceeeecccCcccccccccc---cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 978 STTSISVVGTIGYIAPENAF---TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
..++|||.|||||++. .+.|+-|+||||+|++..|+.-.++|+.... . ...+....+...+.
T Consensus 180 ----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-A----MSALYHIAQNesPt------ 244 (948)
T KOG0577|consen 180 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-A----MSALYHIAQNESPT------ 244 (948)
T ss_pred ----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch-H----HHHHHHHHhcCCCC------
Confidence 3478999999999886 5788999999999999999999999975431 1 11111111111110
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+. ..+....+..++..|++.-|.+|||.+++++|-.-.
T Consensus 245 -Lq-------s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~ 282 (948)
T KOG0577|consen 245 -LQ-------SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVL 282 (948)
T ss_pred -CC-------CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence 00 112233455566699999999999999999986544
No 234
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.3e-33 Score=311.24 Aligned_cols=256 Identities=21% Similarity=0.336 Sum_probs=200.2
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
+|++.+.||+|+||.||+|... +++.||+|.+...........+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 5778899999999999999775 789999998865434444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.++++.......+++..+..++.+++.|+.|||+ +.+|+||||||+||+++.++.++|+|||.+........
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (286)
T cd06622 82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA- 158 (286)
T ss_pred CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc-
Confidence 999999998764334468999999999999999999993 25899999999999999999999999999876533211
Q ss_pred ceeeecccCcccccccccccCC------CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 979 TTSISVVGTIGYIAPENAFTTA------KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~------~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
....++..|+|||.+.+.. ++.++||||+||++|+|++|+.||..... .............. .
T Consensus 159 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~--~---- 227 (286)
T cd06622 159 ---KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETY--ANIFAQLSAIVDGD--P---- 227 (286)
T ss_pred ---ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcch--hhHHHHHHHHhhcC--C----
Confidence 2245788999999885543 48899999999999999999999864321 11111111100000 0
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
+ ........++.+++.+|++.+|++||+++|++++-+
T Consensus 228 -~--------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~ 264 (286)
T cd06622 228 -P--------TLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPW 264 (286)
T ss_pred -C--------CCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChh
Confidence 0 001122344667888999999999999999998754
No 235
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=7.5e-33 Score=303.90 Aligned_cols=252 Identities=23% Similarity=0.357 Sum_probs=202.3
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|+..++||.|+||.||.++. .+++.+++|++.... ......++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999965 458899999885443 334456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++|+|.+++.... ...+++..+..++.|+++|++||| +.+++||||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999997643 345899999999999999999999 88999999999999999999999999999986643321
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......+++.|+|||...+..++.++||||+|+++|||++|+.||..... ........... ....
T Consensus 157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~--~~~~------ 221 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQGN--YTPV------ 221 (256)
T ss_pred --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcCC--CCCC------
Confidence 22335689999999999888899999999999999999999999864321 11111111100 0000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
......++.+++.+||+.+|++||+++|+++++
T Consensus 222 -------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 222 -------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred -------ccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 011223466678899999999999999999875
No 236
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.4e-33 Score=323.21 Aligned_cols=269 Identities=20% Similarity=0.241 Sum_probs=197.3
Q ss_pred HHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC----
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD---- 889 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 889 (1109)
...++|...+.||+|+||.||+|.. ..++.||||++.... .......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 3457899999999999999999965 468899999885432 2233456788999999999999999999886433
Q ss_pred --ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 890 --CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 890 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
..++||||+++ ++.+++.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCc
Confidence 46999999975 67666643 3788899999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC---
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD--- 1044 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 1044 (1109)
+++...... ......||..|+|||++.+..++.++||||+||++|||++|+.||...... ......+......
T Consensus 165 ~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 240 (355)
T cd07874 165 LARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPE 240 (355)
T ss_pred ccccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 998654321 122357899999999999999999999999999999999999999643211 1111111110000
Q ss_pred ---------------ccccccccchhhhHHhh----hchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1045 ---------------TEEINDIVDLSLMEEML----VSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1045 ---------------~~~~~~~~d~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.........+....... .........++.+++.+|++.||++|||+.|+++|-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp 312 (355)
T cd07874 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHP 312 (355)
T ss_pred HHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCc
Confidence 00000000000000000 000111234567888899999999999999999984
No 237
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.7e-34 Score=317.16 Aligned_cols=246 Identities=28% Similarity=0.415 Sum_probs=197.0
Q ss_pred CCCceeecccCeEEEEEEe-CCCcEEE---EEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCc--eeEEE
Q 001275 822 NAKHVIGRGAHGIVYKASL-GPNAVFA---VKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC--GIIMY 895 (1109)
Q Consensus 822 ~~~~~lG~G~~g~Vy~~~~-~~~~~va---vK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~~lv~ 895 (1109)
+...+||+|+|-+||||.+ .+|..|| ||.-......+...+|..|+.+++.++|+|||+++++|.+... ..+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 3456799999999999955 3466665 2322223344455789999999999999999999999988665 78999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC-CcEEEecccCCcccCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE-MEPHISDFGIAKLLDK 974 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfGla~~~~~ 974 (1109)
|.+..|+|..|.++++. .+.+.+..|+.||++||.|||.. .++|+|||||-+||+|+.+ |.|||+|.|+|.....
T Consensus 123 EL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999999998764 88899999999999999999954 7899999999999999754 8999999999998754
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc--ccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE--INDIV 1052 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 1052 (1109)
... ....|||.|||||... ..|+..+||||||+.++||+|+.+||. +....+++.+.+.....+ +..+-
T Consensus 199 s~a----ksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYs----EC~n~AQIYKKV~SGiKP~sl~kV~ 269 (632)
T KOG0584|consen 199 SHA----KSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYS----ECTNPAQIYKKVTSGIKPAALSKVK 269 (632)
T ss_pred ccc----ceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChh----hhCCHHHHHHHHHcCCCHHHhhccC
Confidence 432 2368999999999665 889999999999999999999999975 455555666655543211 11221
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
-+++.++|.+|+.. .++||++.|++++=
T Consensus 270 ----------------dPevr~fIekCl~~-~~~R~sa~eLL~d~ 297 (632)
T KOG0584|consen 270 ----------------DPEVREFIEKCLAT-KSERLSAKELLKDP 297 (632)
T ss_pred ----------------CHHHHHHHHHHhcC-chhccCHHHHhhCh
Confidence 23455677899999 99999999999864
No 238
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=4.8e-33 Score=307.12 Aligned_cols=255 Identities=27% Similarity=0.397 Sum_probs=204.3
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
+|+..+.||+|+||.||+|... +++.||+|++..........++.+|++++++++||||+++++++...+..++|+||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677888999999999999775 688999999866544555667899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++++|.+++.... ..+++..+..++.|+++|++|+| + .+++||||||+||++++++.++|+|||.+........
T Consensus 82 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 82 DGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred CCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 9999999997643 45889999999999999999999 7 8999999999999999999999999999875532211
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
. ...++..|+|||...+..++.++||||+|+++|+|++|+.||...................... +...
T Consensus 157 ~----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 225 (265)
T cd06605 157 K----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP-------PRLP 225 (265)
T ss_pred h----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC-------CCCC
Confidence 1 1578889999999999999999999999999999999999986543222222222222211100 0000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
......++.+++.+||..+|++||++.|++++-
T Consensus 226 -------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~ 258 (265)
T cd06605 226 -------SGKFSPDFQDFVNLCLIKDPRERPSYKELLEHP 258 (265)
T ss_pred -------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCc
Confidence 001233466788899999999999999999764
No 239
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.9e-33 Score=307.97 Aligned_cols=256 Identities=23% Similarity=0.320 Sum_probs=200.1
Q ss_pred hCCCCCceeecccCeEEEEEEeCC----CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP----NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
.+|...++||+|+||.||+|...+ ...||+|...........+.+.+|++++++++||||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788999999999999997643 346899987544434455678999999999999999999998875 567899
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++|+|.+++.... ..+++..+..++.+++.|++||| +.+++||||||+||+++.++.++++|||+++....
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 85 MELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 99999999999997643 34899999999999999999999 89999999999999999999999999999986644
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
.... ......++..|+|||.+....++.++||||||+++||+++ |+.||...... ........ ..... .
T Consensus 160 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~~~----~~~~~---~ 229 (270)
T cd05056 160 ESYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--DVIGRIEN----GERLP---M 229 (270)
T ss_pred ccce-ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHc----CCcCC---C
Confidence 3211 1112345568999999988889999999999999999996 99998644221 11111110 00000 0
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCC
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDAS 1101 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~ 1101 (1109)
.......+.+++.+|+..+|++||++.|+++.|..+.
T Consensus 230 -----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~ 266 (270)
T cd05056 230 -----------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL 266 (270)
T ss_pred -----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 0112235667888999999999999999999998864
No 240
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.6e-33 Score=311.73 Aligned_cols=252 Identities=22% Similarity=0.333 Sum_probs=200.5
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|...+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 6788999999999999999975 578999999885432 33446688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++... .+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 98 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred cCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9999999998652 3788999999999999999999 89999999999999999999999999999876543221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......+++.|+|||...+..++.++||||+||++|++++|+.||.......... ..+.... .....
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-----~~~~~~~--~~~~~---- 237 (297)
T cd06656 171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-----LIATNGT--PELQN---- 237 (297)
T ss_pred --CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-----eeccCCC--CCCCC----
Confidence 1123468889999999999889999999999999999999999996432211100 0000000 00000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.......+.+++.+||+.+|++||+++|++++=+
T Consensus 238 -------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (297)
T cd06656 238 -------PERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPF 271 (297)
T ss_pred -------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 0111233566778999999999999999999644
No 241
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=5e-33 Score=308.64 Aligned_cols=252 Identities=24% Similarity=0.324 Sum_probs=203.1
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
+|+..+.||.|+||.||+|... +++.||+|.+...........+.+|+++++.++|+||+++++++..+...++|+||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYC 81 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEee
Confidence 5778889999999999999764 688999999865544455567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.++++.. .+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++++|||+++......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 82 GGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred CCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 999999998764 4899999999999999999999 8999999999999999999999999999998775432
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
.......++..|+|||+..+..++.++|||||||++|||++|+.||...... ......... ......+
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~-----~~~~~~~~~--~~~~~~~----- 220 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM-----RVLFLIPKN--NPPSLEG----- 220 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH-----HHHHHhhhc--CCCCCcc-----
Confidence 1122346888999999999888999999999999999999999998643211 111111000 0000000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.....++.+++.+|++.+|++||++++++++-.-
T Consensus 221 -------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~ 254 (274)
T cd06609 221 -------NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFI 254 (274)
T ss_pred -------cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhh
Confidence 0022346668889999999999999999987543
No 242
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=5.4e-33 Score=318.83 Aligned_cols=270 Identities=21% Similarity=0.264 Sum_probs=197.2
Q ss_pred HHHHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecC---
Q 001275 814 VIEATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--- 888 (1109)
Q Consensus 814 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--- 888 (1109)
..+..++|...+.||+|+||+||+|.. .+++.||||++.... .......+.+|++++++++||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 344567899999999999999999965 567899999885432 222345677899999999999999999987543
Q ss_pred ---CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEec
Q 001275 889 ---DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISD 965 (1109)
Q Consensus 889 ---~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 965 (1109)
...++++|++ +++|.++++.. .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcC
Confidence 3468999987 77998887642 3899999999999999999999 89999999999999999999999999
Q ss_pred ccCCcccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC
Q 001275 966 FGIAKLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD 1044 (1109)
Q Consensus 966 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
||+++..... .....||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..... ...+..+.......
T Consensus 162 fg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~ 235 (343)
T cd07878 162 FGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-IDQLKRIMEVVGTP 235 (343)
T ss_pred CccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCC
Confidence 9999865432 123578999999999877 5679999999999999999999999854321 11111111111000
Q ss_pred ccc-cccccchhhhHHh-----------hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1045 TEE-INDIVDLSLMEEM-----------LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1045 ~~~-~~~~~d~~~~~~~-----------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
... ...+ ........ ...........+.+++.+|++.||++|||++|+++|-+
T Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~ 300 (343)
T cd07878 236 SPEVLKKI-SSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPY 300 (343)
T ss_pred CHHHHHhc-chhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcc
Confidence 000 0000 00000000 00000011234677888999999999999999998743
No 243
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=5.2e-33 Score=308.65 Aligned_cols=258 Identities=22% Similarity=0.348 Sum_probs=200.4
Q ss_pred hCCCCCceeecccCeEEEEEEeC------CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCcee
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 892 (1109)
++|...+.||+|+||+||+|+.+ +.+.||+|.+...........+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999753 346789998744333324567899999999999999999999999989999
Q ss_pred EEEEeccCCCHHHHHhccCCC------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecc
Q 001275 893 IMYRYMENGSLRDVLHSITPP------PTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDF 966 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 966 (1109)
+||||+++|+|.++++..... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999765422 25899999999999999999999 889999999999999999999999999
Q ss_pred cCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCc
Q 001275 967 GIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 967 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
|++....... ........++..|+|||.+.+..++.++||||||+++|++++ |..||..... ..... ......
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--~~~~~---~~~~~~ 235 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--EEVLN---RLQAGK 235 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--HHHHH---HHHcCC
Confidence 9987543221 112223456778999999988888999999999999999999 6777743211 11111 111000
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. ... .......+.+++.+|++.+|++||++.|++++|.+
T Consensus 236 --~~-~~~-----------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 236 --LE-LPV-----------PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred --cC-CCC-----------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 00 000 01122356778889999999999999999998863
No 244
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.4e-33 Score=316.79 Aligned_cols=238 Identities=24% Similarity=0.277 Sum_probs=185.2
Q ss_pred ceeecccCeEEEEEEe-CCCcEEEEEEeeeccc--ccChHHHHHHHH-HHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH--KRGSLSMKREIQ-TIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.||+|+||+||+|.. .+|+.||+|++..... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 4699999999999966 4689999999854321 222344555554 46778999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++...... ..
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~~ 152 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--DT 152 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--CC
Confidence 99999887533 4889999999999999999999 8999999999999999999999999999987532221 12
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............ ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~~~~~~~----~~~------- 216 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEMYDNILHKPL----VLR------- 216 (325)
T ss_pred cccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHHHHHHHcCCc----cCC-------
Confidence 2345799999999999999999999999999999999999999864321 111111111100 000
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMR 1091 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 1091 (1109)
......+.+++.+|++.+|++||+++
T Consensus 217 -----~~~~~~~~~ll~~ll~~~p~~R~~~~ 242 (325)
T cd05604 217 -----PGASLTAWSILEELLEKDRQRRLGAK 242 (325)
T ss_pred -----CCCCHHHHHHHHHHhccCHHhcCCCC
Confidence 01123455678899999999999875
No 245
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5e-33 Score=311.88 Aligned_cols=254 Identities=21% Similarity=0.340 Sum_probs=201.7
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|+..+.||.|+||.||+|.. .+++.||+|.+... .......+.+|+.+++.++|+|++++++++...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ-KQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc-cCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 4588889999999999999965 57899999988543 233456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 98 LAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred cCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 9999999988653 3889999999999999999999 89999999999999999999999999999886543221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......++..|+|||.+.+..++.++|||||||++|++++|+.||........ . ........ .....
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~----~~~~~~~~--~~~~~---- 237 (296)
T cd06655 171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L----YLIATNGT--PELQN---- 237 (296)
T ss_pred --cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H----HHHHhcCC--cccCC----
Confidence 11234688899999999988899999999999999999999999865422111 1 01110000 00000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......+.+++.+||+.||++||++.+++++=+-.
T Consensus 238 -------~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~ 273 (296)
T cd06655 238 -------PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (296)
T ss_pred -------cccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence 011123455678899999999999999999875543
No 246
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-32 Score=307.90 Aligned_cols=269 Identities=22% Similarity=0.305 Sum_probs=200.2
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|++++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 36888899999999999999775 589999999865432 2234567899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|++++++..+.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKNP---RGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 99999888876543 24899999999999999999999 8999999999999999999999999999998765432
Q ss_pred CCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhc----------Cc
Q 001275 977 ASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWS----------DT 1045 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~----------~~ 1045 (1109)
. ......++..|+|||++.+ ..++.++||||+|+++|||++|+.||......+ ........... ..
T Consensus 155 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 155 D--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred c--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChHHhhhcccc
Confidence 1 1223457889999998876 457899999999999999999999986432211 11111110000 00
Q ss_pred cccccccchhhhHH-hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1046 EEINDIVDLSLMEE-MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
........+..... ............+.+++.+||+.+|++||++.|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 00000000000000 0000011123567788899999999999999999876
No 247
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.9e-33 Score=321.06 Aligned_cols=202 Identities=26% Similarity=0.366 Sum_probs=173.4
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+|+..+.||+|+||+||+|... +++.||+|++.... .......+.+|++++.+++|++|+++++++...+..++|||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E 81 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIME 81 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEe
Confidence 6788899999999999999764 68999999985432 22334578889999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 82 FLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred CCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999999997643 4889999999999999999999 9999999999999999999999999999987543211
Q ss_pred CC---------------------------------ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCC
Q 001275 977 AS---------------------------------TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKA 1023 (1109)
Q Consensus 977 ~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p 1023 (1109)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 00 001134799999999999999999999999999999999999999
Q ss_pred CCCC
Q 001275 1024 LDPS 1027 (1109)
Q Consensus 1024 ~~~~ 1027 (1109)
|...
T Consensus 236 f~~~ 239 (360)
T cd05627 236 FCSE 239 (360)
T ss_pred CCCC
Confidence 9643
No 248
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.2e-33 Score=307.02 Aligned_cols=254 Identities=22% Similarity=0.329 Sum_probs=197.0
Q ss_pred HHhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecC-----
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRK----- 888 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----- 888 (1109)
.++..|+..+.||+|+||.||+|... +++.||+|++... ......+.+|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC--CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 45677888899999999999999764 5788999988533 33456788999999998 799999999998753
Q ss_pred -CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 889 -DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 889 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
...++||||+++|+|.+++.... ...+++..+..++.|++.|++||| +.+|+|||+||+||++++++.++|+|||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCC
Confidence 35789999999999999987633 235889999999999999999999 8899999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhh
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVW 1042 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1042 (1109)
++....... .......|+..|+|||++. +..++.++||||+||++|||++|+.||...... .... ...
T Consensus 157 ~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~~~~-~~~ 229 (272)
T cd06637 157 VSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALF-LIP 229 (272)
T ss_pred Cceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----HHHH-HHh
Confidence 998653321 1223357899999999886 345788999999999999999999998643211 1111 000
Q ss_pred cCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1043 SDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1043 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.. ......+ .....++.+++.+||+.+|.+||+++|+++|
T Consensus 230 ~~--~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 230 RN--PAPRLKS------------KKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred cC--CCCCCCC------------CCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 00 0000000 0112346678889999999999999999876
No 249
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=9.1e-33 Score=309.46 Aligned_cols=268 Identities=21% Similarity=0.329 Sum_probs=198.6
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|+..+.||+|++|.||+|... +++.||+|.+...........+.+|++++++++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999765 68999999986544333445677899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++ +|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 158 (291)
T cd07844 85 LDT-DLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK 158 (291)
T ss_pred CCC-CHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence 985 9999887643 25789999999999999999999 89999999999999999999999999999875432211
Q ss_pred CceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc-------ccc
Q 001275 978 STTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE-------EIN 1049 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 1049 (1109)
......++..|+|||+..+ ..++.++||||+|+++|||++|+.||...................... ...
T Consensus 159 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 159 --TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred --cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 1122356889999998875 457899999999999999999999986433211111111111000000 000
Q ss_pred c-------ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1050 D-------IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1050 ~-------~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. ............ .. ....++.+++.+|++.+|++||+++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAP-RL-DRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred ccccccccccCChhHHHhCc-CC-CCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 0 000000000000 00 112456778899999999999999999875
No 250
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=7.4e-33 Score=314.29 Aligned_cols=196 Identities=27% Similarity=0.421 Sum_probs=159.4
Q ss_pred CceeecccCeEEEEEEeC---CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEec--CCceeEEEEec
Q 001275 824 KHVIGRGAHGIVYKASLG---PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR--KDCGIIMYRYM 898 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~ 898 (1109)
..+||+|+||+||+|+.. ++..||+|.+... .....+.+|++++++++||||+++++++.. ....++|+||+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT---GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA 82 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC---CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence 357999999999999764 4578999987432 223467899999999999999999998854 45678999998
Q ss_pred cCCCHHHHHhccC------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeee----CCCCcEEEecccC
Q 001275 899 ENGSLRDVLHSIT------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILL----DSEMEPHISDFGI 968 (1109)
Q Consensus 899 ~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~DfGl 968 (1109)
++ +|.+++.... ....+++..+..++.|+++||+||| +.+|+||||||+||++ ++++.+||+|||+
T Consensus 83 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 83 EH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred CC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 75 7888775321 1235889999999999999999999 8999999999999999 5667899999999
Q ss_pred CcccCCCCCC-ceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 969 AKLLDKSPAS-TTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 969 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
++........ .......+|+.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9876443221 122345789999999988764 579999999999999999999999864
No 251
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3e-33 Score=310.92 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=198.5
Q ss_pred CCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEecc
Q 001275 821 LNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
|+..+.||+|+||.||+|.. .+++.||+|.+...........+.+|++++++++||||+++++++...+..++|+||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 45567799999999999965 45788999988644444455678999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+++|.+++.. ..+++..+..++.|+++|+.||| +.+++|+||+|+||++++++.++++|||++........
T Consensus 86 ~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06642 86 GGSALDLLKP----GPLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcch--
Confidence 9999998864 24789999999999999999999 89999999999999999999999999999986643221
Q ss_pred eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHH
Q 001275 980 TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEE 1059 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1059 (1109)
......++..|+|||++.+..++.++|||||||++|||++|+.|+....... ..... .... .+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~----~~~~------~~~~--- 221 (277)
T cd06642 157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFLI----PKNS------PPTL--- 221 (277)
T ss_pred hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhhh----hcCC------CCCC---
Confidence 1122467889999999999889999999999999999999999985332110 00000 0000 0000
Q ss_pred hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1060 MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1060 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
......++.+++.+|++.+|++||++.|++++-.
T Consensus 222 -----~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06642 222 -----EGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKF 255 (277)
T ss_pred -----CcccCHHHHHHHHHHccCCcccCcCHHHHHHhHH
Confidence 0112344667888999999999999999998753
No 252
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=3.8e-33 Score=311.65 Aligned_cols=265 Identities=21% Similarity=0.267 Sum_probs=201.3
Q ss_pred ccHHHHHHHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEe
Q 001275 809 YLLKQVIEATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWL 886 (1109)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 886 (1109)
+.++.+..+.++|++.+.||+|+||.||+|.. .+++.+|+|.+.. .......+.+|+.+++++ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~--~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDP--IHDIDEEIEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecc--ccchHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence 44455566788999999999999999999966 4578999998643 222345688899999999 6999999999874
Q ss_pred -----cCCceeEEEEeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc
Q 001275 887 -----RKDCGIIMYRYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME 960 (1109)
Q Consensus 887 -----~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 960 (1109)
.++..++||||+++++|.++++... ....+++..+..++.|+++|+.||| +.+|+||||||+||+++.++.
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCC
Confidence 3456899999999999999886432 2345889999999999999999999 899999999999999999999
Q ss_pred EEEecccCCcccCCCCCCceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHH
Q 001275 961 PHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIV 1035 (1109)
Q Consensus 961 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~ 1035 (1109)
++++|||+++....... ......|++.|+|||++. +..++.++||||+||++|||++|+.||...... .
T Consensus 163 ~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-~--- 236 (286)
T cd06638 163 VKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-R--- 236 (286)
T ss_pred EEEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh-H---
Confidence 99999999986543221 122346899999999875 345788999999999999999999998643211 1
Q ss_pred HHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1036 GWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.+. ...... .....++. ....++.+++.+||+.||++||++.|++++..
T Consensus 237 ~~~-~~~~~~--~~~~~~~~-----------~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 237 ALF-KIPRNP--PPTLHQPE-----------LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred HHh-hccccC--CCcccCCC-----------CcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 110 000000 00000100 11234667888999999999999999998753
No 253
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-32 Score=304.60 Aligned_cols=251 Identities=24% Similarity=0.366 Sum_probs=197.5
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccccc--------ChHHHHHHHHHHhcCCCCceeeEeeEEecCCc
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKR--------GSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 890 (1109)
+|...+.||+|+||.||+|.. .+++.||+|.+....... ....+.+|++++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 467788999999999999965 467899999885432211 12467899999999999999999999999999
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.++|+||+++++|.+++.... .+++..+..++.|+++|++||| +.+++||||+|+||+++.++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997643 4788899999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCCC----ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc
Q 001275 971 LLDKSPAS----TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE 1046 (1109)
Q Consensus 971 ~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
........ .......|+..|+|||...+..++.++||||+||++|+|++|+.||...... ..+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~-- 227 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-----QAIFKIGEN-- 227 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-----HHHHHHhcc--
Confidence 66432111 1112345888999999999888999999999999999999999998643211 111110000
Q ss_pred ccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1047 EINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1047 ~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
..+.. ......++.+++.+||+.||++||++.|++++
T Consensus 228 -----~~~~~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 228 -----ASPEI--------PSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred -----CCCcC--------CcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 00000 01122446667789999999999999999875
No 254
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.5e-33 Score=306.85 Aligned_cols=256 Identities=25% Similarity=0.371 Sum_probs=196.5
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccccc---------ChHHHHHHHHHHhcCCCCceeeEeeEEecCC
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKR---------GSLSMKREIQTIGKIRHRNLVRLEDFWLRKD 889 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 889 (1109)
+|...+.||+|+||.||+|.. .+++.||+|.+....... ..+.+.+|++++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 467788999999999999965 468899999875321111 1245788999999999999999999999999
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
..++|+||+++|+|.++++... .+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999997653 4889999999999999999999 889999999999999999999999999999
Q ss_pred cccCCCCCCceeeecccCcccccccccccCC--CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAFTTA--KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
+...............++..|+|||...... ++.++||||+|+++||+++|+.||..... ..... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~-~~~~~~-- 228 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMF-KLGNKR-- 228 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHH-Hhhccc--
Confidence 7654322222223356889999999887654 78999999999999999999999853211 11111 110000
Q ss_pred cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1048 INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
....++.. ........+.+++.+|++.+|++||+++|+++|
T Consensus 229 ~~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 229 SAPPIPPD--------VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cCCcCCcc--------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 00000000 001123456667789999999999999999987
No 255
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-32 Score=313.74 Aligned_cols=202 Identities=25% Similarity=0.335 Sum_probs=171.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|++.+.||+|+||+||+++.. +++.||+|++.... .......+.+|+.++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 36888999999999999999764 58999999985422 2223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999997532 34888999999999999999999 899999999999999999999999999998765432
Q ss_pred CCCceeeecccCccccccccccc-----CCCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 976 PASTTSISVVGTIGYIAPENAFT-----TAKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
.. .......||+.|+|||++.. ..++.++||||+||++|||++|+.||..
T Consensus 156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 156 GT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred CC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 22 11223469999999998863 4568899999999999999999999864
No 256
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.5e-33 Score=321.29 Aligned_cols=268 Identities=20% Similarity=0.234 Sum_probs=196.6
Q ss_pred HhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecC------
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK------ 888 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------ 888 (1109)
..++|...+.||+|+||.||+|.. ..++.||||++.... .......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 346899999999999999999965 468899999985432 233345788999999999999999999987543
Q ss_pred CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccC
Q 001275 889 DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGI 968 (1109)
Q Consensus 889 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 968 (1109)
...|+||||+++ ++.+++.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCC
Confidence 346999999975 77777643 2788899999999999999999 89999999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEI 1048 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1109)
++...... ......+|..|+|||++.+..++.++||||+||++|||++|+.||...... ......+..........
T Consensus 173 a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 173 ARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEF 248 (364)
T ss_pred ccccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHH
Confidence 98654321 122357899999999999999999999999999999999999999643211 11111111000000000
Q ss_pred ccccchh------------------hhHHh----hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1049 NDIVDLS------------------LMEEM----LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1049 ~~~~d~~------------------~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.....+. ..... ..........++.+++.+|++.||++|||+.|+++|-
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp 319 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 319 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 0000000 00000 0000011123567788899999999999999999974
No 257
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=5.1e-33 Score=310.35 Aligned_cols=270 Identities=21% Similarity=0.321 Sum_probs=197.8
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|...+.||+|+||.||+|... +|+.||+|++..... ......+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777889999999999999764 688999999864432 22345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++ ++|.+++.... ..+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 153 (284)
T cd07839 81 CD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV- 153 (284)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-
Confidence 97 58888876533 34899999999999999999999 8999999999999999999999999999998654322
Q ss_pred CceeeecccCcccccccccccCC-CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc----ccccc
Q 001275 978 STTSISVVGTIGYIAPENAFTTA-KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE----INDIV 1052 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 1052 (1109)
.......++..|+|||++.+.. ++.++||||+||++|||++|+.|+.+............+........ .....
T Consensus 154 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 154 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred -CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 1122346788999999887654 68999999999999999999999755433222111111111000000 00000
Q ss_pred chhhhHHhh-----hchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1053 DLSLMEEML-----VSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1053 d~~~~~~~~-----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
+........ .........++.+++.+|++.||.+|||++|+++|-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~ 282 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence 000000000 000111234566788899999999999999999863
No 258
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8e-33 Score=306.62 Aligned_cols=239 Identities=22% Similarity=0.325 Sum_probs=183.0
Q ss_pred eeecccCeEEEEEEeCC-------------------------CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceee
Q 001275 826 VIGRGAHGIVYKASLGP-------------------------NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVR 880 (1109)
Q Consensus 826 ~lG~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 880 (1109)
.||+|+||.||+|.... ...||+|.+... .......+.+|++++++++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-HRDIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-HHHHHHHHHHHHHHHhcCCCCCeee
Confidence 59999999999996421 134788877432 2223456888999999999999999
Q ss_pred EeeEEecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-
Q 001275 881 LEDFWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM- 959 (1109)
Q Consensus 881 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~- 959 (1109)
++++|......++||||+++|+|.+++.... ..+++..+..++.|+++|++||| +.+|+||||||+||+++..+
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCc
Confidence 9999999999999999999999999986532 35789999999999999999999 89999999999999997643
Q ss_pred ------cEEEecccCCcccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHH-hCCCCCCCCcccc
Q 001275 960 ------EPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELI-TRKKALDPSYKER 1031 (1109)
Q Consensus 960 ------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~ell-tg~~p~~~~~~~~ 1031 (1109)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||......
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~- 228 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPS- 228 (274)
T ss_pred ccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChH-
Confidence 3799999988644221 11357788999998865 56799999999999999995 688887543211
Q ss_pred ccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1032 TDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1032 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.......... .. . .....++.+++.+||+.+|++||+++|++++|.
T Consensus 229 -~~~~~~~~~~----~~-------------~---~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 229 -EKERFYEKKH----RL-------------P---EPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred -HHHHHHHhcc----CC-------------C---CCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 1111111000 00 0 001134677888999999999999999999874
No 259
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=7.6e-33 Score=315.24 Aligned_cols=200 Identities=20% Similarity=0.242 Sum_probs=164.8
Q ss_pred CCceeecc--cCeEEEEEEe-CCCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 823 AKHVIGRG--AHGIVYKASL-GPNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 823 ~~~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
..++||+| +||+||++.. .+|+.||+|++...... .....+++|+++++.++||||+++++++..++..++|+||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35679999 7899999965 56899999998544322 23456788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.+++.... ...+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 9999999996533 234889999999999999999999 899999999999999999999999999875543221110
Q ss_pred c-----eeeecccCccccccccccc--CCCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 979 T-----TSISVVGTIGYIAPENAFT--TAKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 979 ~-----~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 212 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD 212 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 0 1112356778999999876 4588999999999999999999999964
No 260
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.3e-33 Score=305.23 Aligned_cols=253 Identities=23% Similarity=0.319 Sum_probs=196.4
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|...++||+|+||.||+|.. .+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE-PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC-chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 4677788899999999999965 46889999988543 223345678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.++++..+ .+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06645 88 CGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI- 160 (267)
T ss_pred cCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc-
Confidence 99999999987543 4889999999999999999999 8899999999999999999999999999987654321
Q ss_pred CceeeecccCcccccccccc---cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 978 STTSISVVGTIGYIAPENAF---TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.......|+..|+|||++. ...++.++||||+||++|||++|+.||...... ........ .. ...+
T Consensus 161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-~~~~~~~~---~~------~~~~ 229 (267)
T cd06645 161 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-RALFLMTK---SN------FQPP 229 (267)
T ss_pred -cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-hhHHhhhc---cC------CCCC
Confidence 1223457899999999874 456789999999999999999999998543211 11110000 00 0000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.... .......+.+++.+|++.+|++||+++|+++|
T Consensus 230 ~~~~------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 230 KLKD------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cccc------cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 0000 00112235668889999999999999999876
No 261
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2e-32 Score=306.71 Aligned_cols=270 Identities=20% Similarity=0.251 Sum_probs=199.2
Q ss_pred HhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++.+|...+.||+|+||.||+|.. .+++.||+|++...........+.+|++++++++|+||+++.+++..++..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 457899999999999999999965 4688999999865544444557789999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||++ +++.+++.... ..+.+..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9996 68877765432 34778889999999999999999 889999999999999999999999999998754332
Q ss_pred CCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc-------c
Q 001275 976 PASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE-------E 1047 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-------~ 1047 (1109)
.. ......++..|+|||.+.+. .++.++||||+||++|||++|+.||+........+...+........ .
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 157 SQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 11 12234578899999988764 47889999999999999999999997543221111111110000000 0
Q ss_pred c----ccccc---hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1048 I----NDIVD---LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1048 ~----~~~~d---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. ..... +...... ... .....++.+++.+|++.||++|||++|++.|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVV-WKR-LSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred cccccchhccccCCcchhhh-ccc-cCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0 00000 0000000 000 0113456678889999999999999999875
No 262
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=316.07 Aligned_cols=255 Identities=21% Similarity=0.298 Sum_probs=198.8
Q ss_pred CCCCCceeecccCeEEEEEEeCCCcE-EEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLGPNAV-FAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~~~~~-vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
-|.+...||.|+||.||+|..++... .|.|++ .....+...++.-|++++..+.||+||++++.|...+..+++.|||
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvI-etkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVI-ETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhh-cccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 35556679999999999997665444 455666 4445566778999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
.||-.+.++-..+. .+++..+..+.+|++.||.||| +.+|+|||||+.|||++-+|.++++|||++...... .
T Consensus 112 ~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t--~ 184 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST--R 184 (1187)
T ss_pred CCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhH--H
Confidence 99999998876543 4899999999999999999999 999999999999999999999999999998754322 2
Q ss_pred ceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 979 TTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
.....+.|||+|||||++. ..+|++++||||||+++.||..+.+|...- .....+-.+.... .
T Consensus 185 qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel-----npMRVllKiaKSe-------P 252 (1187)
T KOG0579|consen 185 QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL-----NPMRVLLKIAKSE-------P 252 (1187)
T ss_pred hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCcccc-----chHHHHHHHhhcC-------C
Confidence 2334579999999999764 578999999999999999999999885321 1111111111110 0
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
|.+.. .......+.+++.+|+..+|..||+++++++|-+--
T Consensus 253 PTLlq------PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 253 PTLLQ------PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred CcccC------cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 11111 122334455677799999999999999999986544
No 263
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.7e-32 Score=304.90 Aligned_cols=262 Identities=27% Similarity=0.345 Sum_probs=201.7
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecC--CceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 896 (1109)
+|...++||.|++|.||+|.. .+++.+|+|.+..........++.+|++++++++||||+++++++... +..++|||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 81 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAME 81 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEE
Confidence 577889999999999999977 468899999886544444556789999999999999999999998654 36799999
Q ss_pred eccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 897 YMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
|+++++|.+++.... ....+++..+..++.|+++|++||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 999999999876432 2345789999999999999999999 899999999999999999999999999998755322
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc-cccccccch
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT-EEINDIVDL 1054 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~ 1054 (1109)
.. ....++..|+|||.+.+..++.++||||+|+++|+|++|+.||..................... ........
T Consensus 159 ~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 233 (287)
T cd06621 159 LA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG- 233 (287)
T ss_pred cc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC-
Confidence 11 1245788999999999999999999999999999999999999755321111112111111100 00000000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
........+.+++.+|++.+|++||++.|++++-+
T Consensus 234 ---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~ 268 (287)
T cd06621 234 ---------NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPW 268 (287)
T ss_pred ---------CCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcc
Confidence 00112345678888999999999999999999654
No 264
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.7e-32 Score=302.96 Aligned_cols=252 Identities=26% Similarity=0.349 Sum_probs=192.4
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc----ccChHHHHHHHHHHhcCCCCceeeEeeEEecC--Cce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH----KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 891 (1109)
.+|...+.||+|+||.||+|.. .+++.||+|++..... .+....+.+|++++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999966 4688999998754321 12234688899999999999999999988653 567
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++++||+++++|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999997643 3788999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCC-ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 972 LDKSPAS-TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 972 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
....... .......++..|+|||.+.+..++.++||||+||++||+++|+.||...... ..+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-----~~~~~~~~~~~---- 226 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-----AAIFKIATQPT---- 226 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-----HHHHHHhcCCC----
Confidence 5432111 1112346889999999999888999999999999999999999998643111 11111100000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.+... ......+..++ +||..+|++||+++|+++|
T Consensus 227 --~~~~~--------~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 227 --NPQLP--------SHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred --CCCCc--------hhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 00000 01112233344 6888999999999999875
No 265
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.7e-32 Score=301.49 Aligned_cols=238 Identities=24% Similarity=0.368 Sum_probs=186.0
Q ss_pred ceeecccCeEEEEEEeCCCc-----------EEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 825 HVIGRGAHGIVYKASLGPNA-----------VFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
++||+|+||.||+|...+.. .+++|.+..... ....+.+|+.++++++||||+++++++.. +..++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR--DSLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh--hHHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 46999999999999775433 467776643322 26788999999999999999999999988 77899
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-------cEEEecc
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-------EPHISDF 966 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-------~~kl~Df 966 (1109)
|+||+++|+|.+++..... .+++..++.++.|++.|++||| +.+|+||||||+||+++.++ .+|++||
T Consensus 78 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence 9999999999999986432 5889999999999999999999 89999999999999999887 7999999
Q ss_pred cCCcccCCCCCCceeeecccCcccccccccccC--CCCccCcchhhHHHHHHHHhC-CCCCCCCccccccHHHHHHHhhc
Q 001275 967 GIAKLLDKSPASTTSISVVGTIGYIAPENAFTT--AKSKESDVYSYGVVLLELITR-KKALDPSYKERTDIVGWVRSVWS 1043 (1109)
Q Consensus 967 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1109)
|++...... ....++..|+|||++.+. .++.++|||||||++||+++| ..|+..... .....+..
T Consensus 153 g~a~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--~~~~~~~~---- 220 (259)
T cd05037 153 GIPITVLSR------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--SEKERFYQ---- 220 (259)
T ss_pred Ccccccccc------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--hhHHHHHh----
Confidence 999865431 123567789999998876 789999999999999999995 666543211 11111111
Q ss_pred CccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1044 DTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1044 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.... ... .....+.+++.+||+.+|++||++.|+++.|+
T Consensus 221 ~~~~---~~~-------------~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 DQHR---LPM-------------PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred cCCC---CCC-------------CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 000 00145677888999999999999999998874
No 266
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-33 Score=316.50 Aligned_cols=205 Identities=31% Similarity=0.406 Sum_probs=179.2
Q ss_pred CCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecC------CceeE
Q 001275 821 LNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK------DCGII 893 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~~l 893 (1109)
|...+.||+|+||.||+|+ ..+|+.||||.+.........+...+|++++++++|+|||+++++-... +...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 3445679999999999998 5679999999998777777788899999999999999999999875443 35689
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeee--CCCCc--EEEecccCC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILL--DSEME--PHISDFGIA 969 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll--~~~~~--~kl~DfGla 969 (1109)
|||||.+|||+..+.+-.....+++.+.+.+...++.||.||| ..+||||||||.||++ .++|+ .||+|||.|
T Consensus 95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A 171 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA 171 (732)
T ss_pred EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence 9999999999999987666667999999999999999999999 8999999999999998 44454 699999999
Q ss_pred cccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCcccc
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKER 1031 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~ 1031 (1109)
+.+++.. .....+||..|.+||.... +.|+..+|.|||||++|+++||..||.|..+..
T Consensus 172 rel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk 231 (732)
T KOG4250|consen 172 RELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPK 231 (732)
T ss_pred ccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcc
Confidence 9886554 4566899999999998884 889999999999999999999999998865553
No 267
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.6e-32 Score=307.53 Aligned_cols=255 Identities=22% Similarity=0.287 Sum_probs=198.4
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+.|++.++||+|+||.||+|... +++.||+|.+... .......+.+|++++++++|+||+++++++..+...++||||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 56888999999999999999775 4789999988433 333456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|..++.... ..+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 91 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-- 163 (292)
T cd06644 91 CPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-- 163 (292)
T ss_pred CCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc--
Confidence 99999998876533 34899999999999999999999 899999999999999999999999999998754322
Q ss_pred CceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 978 STTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
........++..|+|||++. ...++.++|||||||++|||++|+.||..... ............ ....
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~--~~~~ 236 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSEP--PTLS 236 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHHHHhcCCC--ccCC
Confidence 11222356888999999884 34568899999999999999999999854321 111111111000 0000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
. ......++.+++.+||+.+|++||+++|++++-.-
T Consensus 237 ~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 272 (292)
T cd06644 237 Q-----------PSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFV 272 (292)
T ss_pred C-----------CcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 0 01112346678889999999999999999987543
No 268
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=2.6e-32 Score=300.66 Aligned_cols=254 Identities=25% Similarity=0.342 Sum_probs=201.0
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|...+.+|+|+||.||+|... +++.+|+|.+.... ......+.+|++++++++||||+++++++...+..+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP-GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc-hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 57888999999999999999764 57889999885433 23557789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+||||+|+||++++++.+||+|||.+.......
T Consensus 82 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 155 (262)
T cd06613 82 CGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI- 155 (262)
T ss_pred CCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhh-
Confidence 99999999987642 34889999999999999999999 8999999999999999999999999999987654321
Q ss_pred CceeeecccCcccccccccccC---CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 978 STTSISVVGTIGYIAPENAFTT---AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.......++..|+|||.+.+. .++.++||||+||++|||++|+.||........ ... ..... .. ..
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~----~~~~~--~~---~~ 224 (262)
T cd06613 156 -AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFL----ISKSN--FP---PP 224 (262)
T ss_pred -hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHH----HHhcc--CC---Cc
Confidence 122235688899999998777 789999999999999999999999864321111 110 00000 00 00
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.. ........++.+++.+||+.+|.+||++.|++.+
T Consensus 225 ~~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 225 KL------KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred cc------cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0011223457788889999999999999999865
No 269
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.3e-32 Score=335.08 Aligned_cols=256 Identities=23% Similarity=0.380 Sum_probs=194.9
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecC--CceeE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGII 893 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 893 (1109)
..+|.+.+.||+|+||+||+|... .+..||+|.+.... .......+..|+.++++++|||||+++++|... ...|+
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 467999999999999999999764 56788899885433 223345788999999999999999999988643 46899
Q ss_pred EEEeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCC----CCCeEEeccCCCCeeeCC-----------
Q 001275 894 MYRYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDC----DPPIVHRDIKPENILLDS----------- 957 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~----~~~ivH~Dlk~~NIll~~----------- 957 (1109)
||||+++|+|.+++.... ....+++..++.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 92 VMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~ 171 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQ 171 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccccc
Confidence 999999999999997632 2245899999999999999999999421 145999999999999964
Q ss_pred ------CCcEEEecccCCcccCCCCCCceeeecccCccccccccccc--CCCCccCcchhhHHHHHHHHhCCCCCCCCcc
Q 001275 958 ------EMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFT--TAKSKESDVYSYGVVLLELITRKKALDPSYK 1029 (1109)
Q Consensus 958 ------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~ 1029 (1109)
.+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.....
T Consensus 172 ~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 172 ANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred ccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 23489999999986643322 223579999999998864 4578999999999999999999999964321
Q ss_pred ccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1030 ERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1030 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
....+....... .. . ......++.+++..||+.+|++||++.|++++
T Consensus 249 ----~~qli~~lk~~p----~l---p---------i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 249 ----FSQLISELKRGP----DL---P---------IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred ----HHHHHHHHhcCC----CC---C---------cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 111221111100 00 0 00112346678889999999999999999954
No 270
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.8e-32 Score=312.64 Aligned_cols=257 Identities=23% Similarity=0.293 Sum_probs=193.6
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|.+.++||+|+||+||++... +++.||+|.+.... .......+.+|+.++..++|++|+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999765 47889999885322 1223345788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.++++... ..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999997632 24889999999999999999999 899999999999999999999999999998755332
Q ss_pred CCCceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 976 PASTTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
.. .......||+.|+|||++. ...++.++|||||||++|||++|+.||.... ................
T Consensus 156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~~- 228 (332)
T cd05623 156 GT-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMNHKERFQ- 228 (332)
T ss_pred Cc-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----HHHHHHHHhCCCcccc-
Confidence 21 2222357999999999886 3467899999999999999999999996432 1111111111110000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSN--RPNMRDVVRQL 1097 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~L 1097 (1109)
+ . ........++.+++.+|+..+|++ |++++|+++|-
T Consensus 229 ~-p---------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~ 267 (332)
T cd05623 229 F-P---------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHP 267 (332)
T ss_pred C-C---------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCC
Confidence 0 0 000111233445666777554444 78999999884
No 271
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.4e-32 Score=306.43 Aligned_cols=252 Identities=21% Similarity=0.295 Sum_probs=195.1
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEecc
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
|++.+.||+|+||.||+|... ++..+|+|.+... .......+.+|+++++.++||||+++++++...+..++|+||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK-SEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC-CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 566788999999999999775 4677888887432 23345678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+|+|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||++....... .
T Consensus 86 ~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~ 158 (282)
T cd06643 86 GGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--Q 158 (282)
T ss_pred CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccc--c
Confidence 999999886532 34899999999999999999999 8999999999999999999999999999987553221 1
Q ss_pred eeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 980 TSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
......++..|+|||++. +..++.++||||+||++|||++|+.||..... ........ .... .....+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-~~~~~~~~----~~~~--~~~~~~ 231 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-MRVLLKIA----KSEP--PTLAQP 231 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-HHHHHHHh----hcCC--CCCCCc
Confidence 222356889999999873 45578899999999999999999999854321 11111110 0000 000000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.....++.+++.+||+.+|.+||++.+++++-.
T Consensus 232 -----------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 264 (282)
T cd06643 232 -----------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPF 264 (282)
T ss_pred -----------cccCHHHHHHHHHHccCChhhCcCHHHHhcCCC
Confidence 011234566788999999999999999998764
No 272
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=1.9e-32 Score=303.17 Aligned_cols=255 Identities=25% Similarity=0.391 Sum_probs=198.4
Q ss_pred CCCCCceeecccCeEEEEEEeCC--CcEEEEEEeeecc---------cccChHHHHHHHHHHhc-CCCCceeeEeeEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLGP--NAVFAVKKLAFRG---------HKRGSLSMKREIQTIGK-IRHRNLVRLEDFWLR 887 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 887 (1109)
+|++.+.||+|+||.||+|.... ++.+|+|.+.... ......++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999997754 7889999875322 12223456778888765 799999999999999
Q ss_pred CCceeEEEEeccCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCCcEEEec
Q 001275 888 KDCGIIMYRYMENGSLRDVLHSI-TPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEMEPHISD 965 (1109)
Q Consensus 888 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~~~kl~D 965 (1109)
.+..++||||+++++|.+++... .....+++..+++++.|++.|+.||| + .+++||||+|+||+++.++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLH---KEKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhc---cCCceeecCCCHHHEEECCCCcEEEec
Confidence 99999999999999999988543 22345889999999999999999999 5 6799999999999999999999999
Q ss_pred ccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc
Q 001275 966 FGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 966 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
||.+....... ......++..|+|||...+..++.++||||||+++|||++|+.||..... ...........
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----~~~~~~~~~~~ 229 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----LSLATKIVEAV 229 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----HHHHHHHhhcc
Confidence 99998654432 22345788999999999988899999999999999999999999854311 11111111000
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.... . ......++.+++.+||+.||++||++.|+..++.+
T Consensus 230 --~~~~---------~---~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 230 --YEPL---------P---EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred --CCcC---------C---cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 0000 0 00112446678889999999999999999998863
No 273
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2e-32 Score=300.68 Aligned_cols=252 Identities=26% Similarity=0.414 Sum_probs=198.6
Q ss_pred CCCCceeecccCeEEEEEEeCC-----CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 821 LNAKHVIGRGAHGIVYKASLGP-----NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+.+.+.||.|+||.||+|.... +..||+|++...........+..|++++.+++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3467889999999999997754 48899999855444435678999999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++++|.+++..... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 99999999999976432 22899999999999999999999 899999999999999999999999999999876544
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
...... ...+++.|+|||...+..++.++||||+|+++|+|++ |+.||... ...+....+ ..... . . .
T Consensus 157 ~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--~~~~~~~~~---~~~~~-~-~--~- 225 (258)
T smart00219 157 DYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--SNEEVLEYL---KKGYR-L-P--K- 225 (258)
T ss_pred cccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHH---hcCCC-C-C--C-
Confidence 222211 2337789999999988889999999999999999998 67776532 111111111 11000 0 0 0
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
......++.+++.+|++.+|++||++.|+++.|
T Consensus 226 ----------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 226 ----------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011234567788899999999999999999864
No 274
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=2e-32 Score=300.63 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=198.1
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecC-CceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK-DCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e 896 (1109)
+|++.+.||+|++|.||++... +++.||+|++..... ....+.+.+|++++++++|+|++++++.+... ...++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4778899999999999999754 578899999854332 33455788999999999999999999887644 45789999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++++|.+++.... ...+++..+..++.+++.|++||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 999999999997633 235899999999999999999999 8999999999999999999999999999998664322
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
. ......+++.|+|||+..+..++.++||||+|+++|++++|+.||+.... ........... ....
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~--~~~~----- 222 (257)
T cd08223 157 D--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGK--LPPM----- 222 (257)
T ss_pred C--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcC--CCCC-----
Confidence 1 22235688999999999999999999999999999999999999864321 11111111100 0000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.......+.+++.+|++.+|++||++.|++++
T Consensus 223 --------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 223 --------PKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred --------ccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 01122346678889999999999999999976
No 275
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=7.3e-33 Score=315.57 Aligned_cols=257 Identities=21% Similarity=0.289 Sum_probs=195.1
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|.+.+.||+|+||+||+++.. +++.||+|.+.... .......+.+|..++..++|++|+++++++...+..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999765 57889999885422 2223445788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999997632 24788999999999999999999 899999999999999999999999999999866433
Q ss_pred CCCceeeecccCccccccccccc-----CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 976 PASTTSISVVGTIGYIAPENAFT-----TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
.. .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||..... .............. .
T Consensus 156 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~~-~ 228 (331)
T cd05624 156 GT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHEERF-Q 228 (331)
T ss_pred Cc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----HHHHHHHHcCCCcc-c
Confidence 22 12223579999999998875 4678899999999999999999999964321 11111111111000 0
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCC--CCCHHHHHHHh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSN--RPNMRDVVRQL 1097 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~evl~~L 1097 (1109)
+ . ........++.+++.+|++.++++ |++++++++|-
T Consensus 229 ~-p---------~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~ 267 (331)
T cd05624 229 F-P---------SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHA 267 (331)
T ss_pred C-C---------CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCC
Confidence 0 0 000111234555666888766554 57899998874
No 276
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=8e-33 Score=309.10 Aligned_cols=269 Identities=23% Similarity=0.341 Sum_probs=199.2
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccccc-ChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKR-GSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
++|+..++||+|+||.||+|... +++.||+|++....... ....+.+|++++++++||||+++++++..++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 36788899999999999999875 58999999875433222 34568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|++++++.++.... ..+++..+..++.|+++|++||| +.+|+|||++|+||++++++.++++|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKYP---NGLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 99999998877543 23899999999999999999999 8899999999999999999999999999988654332
Q ss_pred CCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 977 ASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
. ......++..|+|||+..+ ..++.++||||||+++|||++|+.||...... .....................+..
T Consensus 155 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 155 E--VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred c--ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccc
Confidence 1 1223467889999998875 44688999999999999999999888543211 111111110000000000000000
Q ss_pred h------hHH-----hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1056 L------MEE-----MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1056 ~------~~~-----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. ... ............+.+++.+||+.+|++||+++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0 000 0000011224567788899999999999999999876
No 277
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4e-32 Score=298.36 Aligned_cols=249 Identities=25% Similarity=0.353 Sum_probs=198.6
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc----ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH----KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
+|+..+.||+|+||.||+|... +++.|++|.+..... ++..+.+.+|++++++++|+||+++++++...+..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677889999999999999776 789999998855432 22345788999999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
+||+++++|.+++.... .+++..+..++.|+++|++||| +.+|+|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997643 4789999999999999999999 89999999999999999999999999999886543
Q ss_pred CCCCceeeecccCcccccccccccCC-CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTA-KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
.. ......++..|+|||...... ++.++|+||||+++|++++|+.||..... ........ .......+
T Consensus 155 ~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~--~~~~~~~~-- 223 (258)
T cd06632 155 FS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG----VAAVFKIG--RSKELPPI-- 223 (258)
T ss_pred cc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH----HHHHHHHH--hcccCCCc--
Confidence 32 123356889999999887766 89999999999999999999999865321 11111100 00000000
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......++.+++.+||+.+|++||+++|++++
T Consensus 224 -----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 224 -----------PDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred -----------CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 00112345667889999999999999999875
No 278
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=2.3e-32 Score=305.42 Aligned_cols=270 Identities=24% Similarity=0.323 Sum_probs=201.2
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++++++||||+++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999764 689999999865432 33356789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+ +++|.+++.... ..+++..+..++.|+++|++||| +.+|+|+||||+||+++.++.++++|||.+........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999987543 35899999999999999999999 89999999999999999999999999999987654321
Q ss_pred CceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHh-------hcCcccc-
Q 001275 978 STTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSV-------WSDTEEI- 1048 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~- 1048 (1109)
.......++..|+|||.+.+. .++.++||||+|+++|||++|+.+|.... +........... |......
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 -RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN-DIEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred -CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC-HHHHHHHHHHHcCCCChHHHhhccCcc
Confidence 112234688999999988654 45899999999999999999977764332 111111111110 0000000
Q ss_pred --ccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1049 --NDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1049 --~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
..+..+............+...++.+++.+|++.+|++||+++++++|-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~ 283 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHP 283 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 0000000000000000112236678888999999999999999999874
No 279
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.9e-32 Score=300.67 Aligned_cols=251 Identities=21% Similarity=0.344 Sum_probs=200.5
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|+..++||+|+||.||++.. .+++.||+|++.... ......++.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 477889999999999999965 468899999985432 233445789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++.... ...+++..+.+++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 99999999987533 234789999999999999999999 89999999999999999999999999999986643221
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......|++.|+|||+..+..++.++|||||||++|+|++|+.||..... ...+........ ..
T Consensus 157 --~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~~--~~------- 220 (256)
T cd08218 157 --LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----KNLVLKIIRGSY--PP------- 220 (256)
T ss_pred --hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----HHHHHHHhcCCC--CC-------
Confidence 11224588899999999988899999999999999999999999864311 111111111100 00
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.......++.+++.+|++.+|++||+++||+++
T Consensus 221 ------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 221 ------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred ------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 011223456778889999999999999999986
No 280
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.6e-32 Score=325.59 Aligned_cols=268 Identities=19% Similarity=0.216 Sum_probs=192.1
Q ss_pred HHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCC------CceeeEeeEEecC
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRH------RNLVRLEDFWLRK 888 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~~~~ 888 (1109)
..+++|.+.++||+|+||+||+|.. ..++.||||++... .....++..|++++..++| .+++++++++...
T Consensus 126 ~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~ 203 (467)
T PTZ00284 126 VSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV--PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE 203 (467)
T ss_pred cCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc--hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC
Confidence 3457899999999999999999966 45788999998432 2223455667777777654 4588999988764
Q ss_pred -CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCC-------
Q 001275 889 -DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEM------- 959 (1109)
Q Consensus 889 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~------- 959 (1109)
...++|||++ +++|.+++...+ .+++..+..++.|++.||+||| + .+||||||||+|||++.++
T Consensus 204 ~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~ 276 (467)
T PTZ00284 204 TGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVT 276 (467)
T ss_pred CceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hcCCeecCCCCHHHEEEecCCccccccc
Confidence 4678888887 678999887643 4899999999999999999999 6 5999999999999998765
Q ss_pred ---------cEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccc
Q 001275 960 ---------EPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKE 1030 (1109)
Q Consensus 960 ---------~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~ 1030 (1109)
.+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||+....
T Consensus 277 ~~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~- 350 (467)
T PTZ00284 277 NRALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN- 350 (467)
T ss_pred ccccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 499999998864322 12245799999999999999999999999999999999999999965322
Q ss_pred cccHHHHHHHhhcC--------------------ccccccccchhhhHHhhhch---hHHHHHHHHHHHHhccCCCCCCC
Q 001275 1031 RTDIVGWVRSVWSD--------------------TEEINDIVDLSLMEEMLVSS---IRDQVIDVLLVALRCTEKKPSNR 1087 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~--------------------~~~~~~~~d~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~R 1087 (1109)
.+....+...... ........++.......... .......+.+++.+|++.||++|
T Consensus 351 -~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 429 (467)
T PTZ00284 351 -LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKR 429 (467)
T ss_pred -HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhC
Confidence 1111111111000 00000001111000000000 00112456789999999999999
Q ss_pred CCHHHHHHHhhh
Q 001275 1088 PNMRDVVRQLVD 1099 (1109)
Q Consensus 1088 Ps~~evl~~L~~ 1099 (1109)
||++|+++|=+-
T Consensus 430 ~ta~e~L~Hp~~ 441 (467)
T PTZ00284 430 LNARQMTTHPYV 441 (467)
T ss_pred CCHHHHhcCccc
Confidence 999999987543
No 281
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4e-32 Score=303.11 Aligned_cols=270 Identities=21% Similarity=0.333 Sum_probs=201.5
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
+|+..++||.|++|.||+|+.. +++.||||++...........+.+|++++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788899999999999999775 688999999866554445567788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++ +|.+++........+++..+..++.|+++|++||| +.+++||||||+||++++++.++++|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 85 89998876554456899999999999999999999 88999999999999999999999999999975533211
Q ss_pred ceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-ccccccccc---
Q 001275 979 TTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-TEEINDIVD--- 1053 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d--- 1053 (1109)
......++..|+|||++.+. .++.++||||+||++|+|++|+.||...... ............. ......+.+
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhcCch
Confidence 11234578899999987654 4688999999999999999999998654221 1111111110000 000000000
Q ss_pred -----hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1054 -----LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1054 -----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
+................++.+++.+|++.||.+||+++|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000000000011223456778889999999999999999875
No 282
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.7e-33 Score=304.97 Aligned_cols=257 Identities=22% Similarity=0.336 Sum_probs=201.8
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecc-cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+.|++.+.||+||.+.||++...+.+.||+|++.... +......|..|+..+.++ .|.+||++++|-..++..|+|||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 5688889999999999999999988999999875443 445567799999999999 59999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|-+ .+|..+++.... ....| .++.+..|++.|+.+.| ..+|||.||||.|+++- +|.+||+|||.|..+..+.
T Consensus 441 ~Gd-~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred ccc-ccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCccc
Confidence 975 499999987543 22345 78889999999999999 99999999999999884 5789999999999887665
Q ss_pred CCceeeecccCcccccccccccCC-----------CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTA-----------KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~-----------~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
........+||+.||+||.+.... .+.++||||+|||+|+|+.|+.||..... .|.
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~a------- 580 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QIA------- 580 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HHH-------
Confidence 555566789999999999876432 46799999999999999999999853211 111
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.+..+.++.-..++.. .. ...++++++..|++.||++||+..|+++|-.-
T Consensus 581 -Kl~aI~~P~~~Iefp~--~~-~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl 630 (677)
T KOG0596|consen 581 -KLHAITDPNHEIEFPD--IP-ENDELIDVMKCCLARDPKKRWSIPELLQHPFL 630 (677)
T ss_pred -HHHhhcCCCccccccC--CC-CchHHHHHHHHHHhcCcccCCCcHHHhcCccc
Confidence 1122333322111110 00 01127788889999999999999999987543
No 283
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=3.2e-32 Score=303.66 Aligned_cols=255 Identities=23% Similarity=0.336 Sum_probs=193.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHH-HhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQT-IGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
++|++.+.||+|+||.||+|... +|+.||+|++...........+..|+.. ++..+||||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36788899999999999999765 6899999998654333344556666665 566689999999999999999999999
Q ss_pred eccCCCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 897 YMENGSLRDVLHSI-TPPPTLEWNVRYKIALGAAHALAYLHYDCDP-PIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|++ |+|.+++... .....+++..++.++.|++.|++||| +. +++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 997 6898887653 23346899999999999999999999 76 899999999999999999999999999986533
Q ss_pred CCCCceeeecccCccccccccccc----CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFT----TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
.. ......++..|+|||.+.+ ..++.++|+||+||++|||++|+.||............. ....
T Consensus 157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~----~~~~----- 224 (283)
T cd06617 157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV----VEEP----- 224 (283)
T ss_pred cc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH----HhcC-----
Confidence 21 1122468889999998764 456889999999999999999999985422111111111 0000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.+... ......++.+++.+|++.+|++||+++|++++-.
T Consensus 225 --~~~~~-------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 263 (283)
T cd06617 225 --SPQLP-------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPF 263 (283)
T ss_pred --CCCCC-------ccccCHHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence 00000 0011234667888999999999999999998543
No 284
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.3e-32 Score=303.20 Aligned_cols=257 Identities=22% Similarity=0.354 Sum_probs=196.6
Q ss_pred CCCCceeecccCeEEEEEEeC----CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC------
Q 001275 821 LNAKHVIGRGAHGIVYKASLG----PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD------ 889 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 889 (1109)
|.+.++||+|+||+||+|... .++.||||++.... ......++.+|++++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556788999999999999653 46889999885432 2233557889999999999999999999886542
Q ss_pred ceeEEEEeccCCCHHHHHhccC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecc
Q 001275 890 CGIIMYRYMENGSLRDVLHSIT---PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDF 966 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 966 (1109)
..++++||+++|+|.+++.... ....+++..+.+++.|++.|++||| +.+|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 2378899999999998875321 2235789999999999999999999 889999999999999999999999999
Q ss_pred cCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCc
Q 001275 967 GIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 967 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
|+++...............+++.|++||......++.++||||||+++|||++ |+.||..... .....+. ....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~---~~~~ 232 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYL---IKGN 232 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHH---HcCC
Confidence 99986643322222223346678999999998889999999999999999999 7777753311 1111111 1110
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
... . ......++.+++.+|++.+|++||++.|+++.|+++
T Consensus 233 -~~~---~-----------~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 -RLK---Q-----------PPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -cCC---C-----------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 0 011234577788899999999999999999999875
No 285
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.3e-32 Score=306.40 Aligned_cols=255 Identities=20% Similarity=0.310 Sum_probs=199.2
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
.++|.+.+.||+|+||.||+|... ++..||+|.+... .......+.+|++++++++|+||+++++++...+..++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 356888899999999999999764 6889999988533 33344578899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++++|.+++.... ..+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 83 FCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred ccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 999999999987643 34899999999999999999999 8999999999999999999999999999987553321
Q ss_pred CCceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccc
Q 001275 977 ASTTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDI 1051 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
.......+++.|+|||.+. +..++.++||||+|+++|||++|+.||...... ........... ...
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~--~~~ 228 (280)
T cd06611 158 --QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-----RVLLKILKSEP--PTL 228 (280)
T ss_pred --cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-----HHHHHHhcCCC--CCc
Confidence 1222356899999999874 345678999999999999999999998643211 11111111000 000
Q ss_pred cchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1052 VDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1052 ~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
+. ......++.+++.+||+.+|.+||++.+++++-+
T Consensus 229 -~~----------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 264 (280)
T cd06611 229 -DQ----------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPF 264 (280)
T ss_pred -CC----------cccCCHHHHHHHHHHhccChhhCcCHHHHhcChh
Confidence 00 0111234566788999999999999999998854
No 286
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.6e-32 Score=307.39 Aligned_cols=260 Identities=22% Similarity=0.291 Sum_probs=198.9
Q ss_pred HHHHHHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecC-
Q 001275 812 KQVIEATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRK- 888 (1109)
Q Consensus 812 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~- 888 (1109)
.++..++++|.+.+.||+|+||.||+|.. .+++.+|+|.+... ......+.+|+.++.++ +|||++++++++...
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~ 92 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI--SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD 92 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc--ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc
Confidence 44445678899999999999999999976 46889999987432 22345678899999999 899999999998754
Q ss_pred ----CceeEEEEeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEE
Q 001275 889 ----DCGIIMYRYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHI 963 (1109)
Q Consensus 889 ----~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 963 (1109)
+..++|+||+++|+|.++++... ....+++..++.++.|++.|++||| +.+|+||||||+||++++++.+||
T Consensus 93 ~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl 169 (291)
T cd06639 93 KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKL 169 (291)
T ss_pred ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEE
Confidence 35799999999999999886432 2345899999999999999999999 889999999999999999999999
Q ss_pred ecccCCcccCCCCCCceeeecccCcccccccccccC-----CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHH
Q 001275 964 SDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTT-----AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWV 1038 (1109)
Q Consensus 964 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~ 1038 (1109)
+|||++......... .....|+..|+|||.+... .++.++||||+||++|||++|+.||...... ... .
T Consensus 170 ~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~---~ 243 (291)
T cd06639 170 VDFGVSAQLTSTRLR--RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTL---F 243 (291)
T ss_pred eecccchhccccccc--ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHH---H
Confidence 999998865432211 1224688899999987543 3688999999999999999999998643211 111 1
Q ss_pred HHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1039 RSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.. ... ....+.+ ..+....+.+++.+|++.+|++||++.|+++|
T Consensus 244 ~~-~~~--~~~~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 244 KI-PRN--PPPTLLH-----------PEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HH-hcC--CCCCCCc-----------ccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 11 000 0000101 01122346778889999999999999999986
No 287
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=3.1e-32 Score=298.91 Aligned_cols=250 Identities=28% Similarity=0.430 Sum_probs=198.7
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|+..+.||+|+||.||+|.. .+++.+|+|++.... .......+.+|++++++++|||++++++.+..++..++|+||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477889999999999999965 468899999985443 223456788999999999999999999999988999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC-CcEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE-MEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfGla~~~~~~~ 976 (1109)
+++++|.+++.... ...+++..+.+++.++++|++||| +.+|+||||+|+||+++++ +.+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999997643 335889999999999999999999 8999999999999999865 458999999998664332
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
. .....++..|+|||...+..++.++||||||+++|+|++|+.||..... ........... ...+
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~~~~--~~~~----- 221 (256)
T cd08220 157 K---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIMSGT--FAPI----- 221 (256)
T ss_pred c---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHHhcC--CCCC-----
Confidence 2 1234688999999999988899999999999999999999999854321 11111111000 0000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......++.+++.+||+.+|++||+++|++++
T Consensus 222 --------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 222 --------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred --------CCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 01123346678889999999999999999976
No 288
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=8.3e-33 Score=303.86 Aligned_cols=241 Identities=21% Similarity=0.313 Sum_probs=184.4
Q ss_pred ceeecccCeEEEEEEeCC--------CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 825 HVIGRGAHGIVYKASLGP--------NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+.||+|+||.||+|.... ...||+|.+.. ........+.+|+.++++++||||+++++++..++..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDK-SHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcc-hhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 369999999999996532 23477777632 223334578889999999999999999999999899999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc--------EEEecccC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME--------PHISDFGI 968 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--------~kl~DfGl 968 (1109)
|+++|+|.++++.... .+++..++.++.|++.|++||| +.+|+||||||+||+++.++. ++++|||+
T Consensus 80 ~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 80 YVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred cCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999999976432 5889999999999999999999 899999999999999987765 69999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
+...... ....++..|+|||++.+. .++.++|||||||++|||++|..++....... ..... ......
T Consensus 155 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~----~~~~~-~~~~~~ 223 (258)
T cd05078 155 SITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ----KKLQF-YEDRHQ 223 (258)
T ss_pred ccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH----HHHHH-HHcccc
Confidence 8755322 124678899999998864 57999999999999999999964432211110 00000 000000
Q ss_pred cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1048 INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
+ ......++.+++.+||+.||++||+++|+++.|+
T Consensus 224 ---~-------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 224 ---L-------------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---C-------------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0 0011234677888999999999999999999874
No 289
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.8e-32 Score=302.00 Aligned_cols=249 Identities=22% Similarity=0.321 Sum_probs=199.3
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
-|+..+.||+|+||.||+|.. .+++.||+|.+...........+.+|++++++++||||+++++++..++..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 466788899999999999976 4688999998754444444567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.+++... .+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 85 ~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06641 85 GGGSALDLLEPG----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence 999999998642 3789999999999999999999 89999999999999999999999999999876543221
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
......++..|+|||...+..++.++||||+||++|+|++|..||..... ........... ... +
T Consensus 157 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~--~~~-~------ 221 (277)
T cd06641 157 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKNN--PPT-L------ 221 (277)
T ss_pred -hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcCC--CCC-C------
Confidence 12234678899999999888889999999999999999999999854221 11111110000 000 0
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
......++.+++.+|++.+|++||+++|++++-
T Consensus 222 ------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~ 254 (277)
T cd06641 222 ------EGNYSKPLKEFVEACLNKEPSFRPTAKELLKHK 254 (277)
T ss_pred ------CcccCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 011223456678899999999999999999973
No 290
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.1e-32 Score=314.30 Aligned_cols=243 Identities=22% Similarity=0.250 Sum_probs=185.1
Q ss_pred eecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcC---CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 827 IGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKI---RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
||+|+||+||+|+.. +++.||+|++..... ......+..|..++.+. +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999764 589999999854321 12233455666666655 699999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.+++.... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~ 152 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KT 152 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CC
Confidence 99999987533 4889999999999999999999 8999999999999999999999999999987543221 11
Q ss_pred eeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHH
Q 001275 981 SISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEE 1059 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 1059 (1109)
.....||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ............... .
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~~~~~---~------ 218 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFGKVRFP---K------ 218 (330)
T ss_pred ccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcCCCCCC---C------
Confidence 2235799999999988765 479999999999999999999999864321 111111111100000 0
Q ss_pred hhhchhHHHHHHHHHHHHhccCCCCCCCC----CHHHHHHHh
Q 001275 1060 MLVSSIRDQVIDVLLVALRCTEKKPSNRP----NMRDVVRQL 1097 (1109)
Q Consensus 1060 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RP----s~~evl~~L 1097 (1109)
. ....++.+++.+|++.||++|| ++.|+++|-
T Consensus 219 ---~---~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~ 254 (330)
T cd05586 219 ---N---VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHP 254 (330)
T ss_pred ---c---cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCc
Confidence 0 0122345677799999999998 677777764
No 291
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=3.1e-32 Score=298.63 Aligned_cols=247 Identities=25% Similarity=0.366 Sum_probs=194.9
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
++|.+.+.||+|+||.||+|.. .++.||+|.+... .....+.+|+.++++++|||++++++++... ..++||||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~---~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD---VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc---chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 4588899999999999999975 5778999987432 2345788999999999999999999998654 579999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++|+|.+++.... ...+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~-- 154 (254)
T cd05083 81 SKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV-- 154 (254)
T ss_pred CCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccC--
Confidence 9999999997643 335789999999999999999999 8999999999999999999999999999987543221
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.....+..|+|||.+.+..++.++||||+||++|||++ |+.||...... ......... ... ++
T Consensus 155 ---~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~-~~~----~~--- 218 (254)
T cd05083 155 ---DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK-----EVKECVEKG-YRM----EP--- 218 (254)
T ss_pred ---CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH-----HHHHHHhCC-CCC----CC---
Confidence 11234568999999988899999999999999999998 88887543211 111111100 000 00
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.......+.+++.+||+.+|++||+++++++.|++
T Consensus 219 -------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 219 -------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 01122446678889999999999999999998864
No 292
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.8e-32 Score=304.38 Aligned_cols=251 Identities=22% Similarity=0.353 Sum_probs=199.6
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|...+.||+|+||.||+|.. .+++.||+|.+... .......+.+|+.++++++||||+++++++...+..++|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ-QQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc-cchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 5788899999999999999965 46788999987432 333456788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 98 LAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 9999999998753 3789999999999999999999 89999999999999999999999999999876543222
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
......+++.|+|||...+..++.++|||||||++|++++|+.||........ .. ....... ...
T Consensus 171 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~----~~~~~~~--~~~------ 235 (293)
T cd06647 171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY----LIATNGT--PEL------ 235 (293)
T ss_pred --ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-ee----ehhcCCC--CCC------
Confidence 22234688899999999888899999999999999999999999964322110 00 0000000 000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.........+.+++.+||+.+|++||+++|++.|-
T Consensus 236 -----~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~ 270 (293)
T cd06647 236 -----QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHP 270 (293)
T ss_pred -----CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 00011223456688899999999999999999984
No 293
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-33 Score=284.90 Aligned_cols=267 Identities=22% Similarity=0.346 Sum_probs=200.9
Q ss_pred cccHHHHHHHhhCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEE
Q 001275 808 SYLLKQVIEATENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFW 885 (1109)
Q Consensus 808 ~~~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 885 (1109)
.-.+++..+.|. +.||+|+|+.|-.+ ...+|..||||++. +.......++.+|++++.+. .|+||+++++||
T Consensus 72 ~g~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiid-Kq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 72 SGKFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIID-KQPGHSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred cchHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhh-cCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 334667777764 56999999999988 56789999999984 33555667899999999999 599999999999
Q ss_pred ecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc---EE
Q 001275 886 LRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME---PH 962 (1109)
Q Consensus 886 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~k 962 (1109)
++++..|+|||-|.||+|..++++.. .+++.++.++..+|+.||++|| .++|.|||+||+|||...... +|
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~~~---~F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQKRK---HFNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cccceEEEEEecccCchHHHHHHHhh---hccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCcee
Confidence 99999999999999999999998755 4899999999999999999999 999999999999999976544 79
Q ss_pred EecccCCcccCCC-----CCCceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccc
Q 001275 963 ISDFGIAKLLDKS-----PASTTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERT 1032 (1109)
Q Consensus 963 l~DfGla~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~ 1032 (1109)
|+||.++.-.... .........+|+..|||||+.. ...|+.++|.||+|||+|-|++|..||.+.-+.+-
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 9999887543211 1112223468899999999663 34578999999999999999999999976433211
Q ss_pred cHHHHHHHhhcCccccccccchhhhH----------HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1033 DIVGWVRSVWSDTEEINDIVDLSLME----------EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1033 ~~~~~~~~~~~~~~~~~~~~d~~~~~----------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
+ |...+.- +.-...+.+ +..+..+..+..+++ ...+..||..|.++.++++|-+
T Consensus 300 ---G-----WdrGe~C-r~CQ~~LFesIQEGkYeFPdkdWahIS~eakdli---snLlvrda~~rlsa~~vlnhPw 363 (463)
T KOG0607|consen 300 ---G-----WDRGEVC-RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLI---SNLLVRDAKQRLSAAQVLNHPW 363 (463)
T ss_pred ---C-----ccCCCcc-HHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHH---HHHHhccHHhhhhhhhccCCcc
Confidence 1 1111110 000111111 111223445555544 4666799999999999998644
No 294
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.98 E-value=1.1e-31 Score=296.08 Aligned_cols=252 Identities=27% Similarity=0.460 Sum_probs=204.4
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
+|+..+.||+|++|.||+|... +++.||+|++...........+.+|++.+.+++|+|++++++++...+..++|+||+
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYM 81 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEec
Confidence 5788899999999999999776 489999999865444345678999999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++++|.+++... ..+++..+..++.|+++|++|+| + .+++||||+|+||+++.++.++++|||.+........
T Consensus 82 ~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 82 DGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred CCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 999999999764 34899999999999999999999 8 9999999999999999999999999999986643322
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
.. ....++..|+|||.+.+..++.++||||||+++|+|++|+.||..... ............... ...
T Consensus 156 ~~--~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~--~~~------ 223 (264)
T cd06623 156 QC--NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDGPP--PSL------ 223 (264)
T ss_pred cc--cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcCCC--CCC------
Confidence 21 234678899999999999899999999999999999999999865421 112222222211100 000
Q ss_pred HHhhhchhHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1058 EEMLVSSIRD-QVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1058 ~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
... ....+.+++.+|++.+|++||++.|++++
T Consensus 224 -------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 224 -------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011 23456778889999999999999999986
No 295
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.98 E-value=5.8e-32 Score=298.48 Aligned_cols=253 Identities=26% Similarity=0.313 Sum_probs=193.4
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc----ccChHHHHHHHHHHhcCCCCceeeEeeEEecC--Cce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH----KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 891 (1109)
.+|+..+.||+|+||.||+|.. .+++.||+|.+..... ......+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4788899999999999999976 4589999998753321 12235688899999999999999999988764 457
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++||||+++++|.+++.... .+++..+.+++.|++.||+||| +.+|+|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999987543 3788889999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCC-ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 972 LDKSPAS-TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 972 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
....... .......++..|+|||.+.+..++.++|||||||++|||++|+.||..... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~----- 226 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA----MAAIFKIATQPT----- 226 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch----HHHHHHHhcCCC-----
Confidence 5432111 112234688999999999888899999999999999999999999853211 111111110000
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.+.. .......+..++.+|+. +|++||+++|++++-
T Consensus 227 --~~~~--------~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~ 262 (265)
T cd06652 227 --NPVL--------PPHVSDHCRDFLKRIFV-EAKLRPSADELLRHT 262 (265)
T ss_pred --CCCC--------chhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCc
Confidence 0000 11122334556668884 999999999998763
No 296
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.98 E-value=4.2e-32 Score=303.73 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=195.9
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
.|.....||+|+||.||++.. .++..||||++... .......+.+|+.++++++|+||+++++.+...+..++||||+
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR-KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc-hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCC
Confidence 344456799999999999976 46889999987433 2334456889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 102 ~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~- 173 (292)
T cd06658 102 EGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP- 173 (292)
T ss_pred CCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc-
Confidence 999999988542 3789999999999999999999 88999999999999999999999999999876533221
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
......|+..|+|||...+..++.++|||||||++|||++|+.||...... .....+... ..+....
T Consensus 174 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~----------~~~~~~~ 240 (292)
T cd06658 174 -KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRIRDN----------LPPRVKD 240 (292)
T ss_pred -cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhc----------CCCcccc
Confidence 122356889999999998888999999999999999999999998643211 111111000 0000000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.......+..++.+|++.||++||+++|++++-.
T Consensus 241 ------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 274 (292)
T cd06658 241 ------SHKVSSVLRGFLDLMLVREPSQRATAQELLQHPF 274 (292)
T ss_pred ------ccccCHHHHHHHHHHccCChhHCcCHHHHhhChh
Confidence 0011223556777999999999999999998843
No 297
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.98 E-value=3.3e-32 Score=303.38 Aligned_cols=260 Identities=22% Similarity=0.318 Sum_probs=199.2
Q ss_pred cHHHHHHHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEec
Q 001275 810 LLKQVIEATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLR 887 (1109)
Q Consensus 810 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 887 (1109)
++.+...+...|+..+.||+|+||.||+|.. .+++.+|+|.+... .....++..|+.++.++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~--~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC--hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 4445556678899999999999999999976 46789999987432 23345688899999998 79999999999853
Q ss_pred ------CCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcE
Q 001275 888 ------KDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEP 961 (1109)
Q Consensus 888 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 961 (1109)
.+..+++|||+++|+|.+++.... ...+++..+..++.|+++|++||| +.+|+|||++|+||++++++.+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~ 160 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEV 160 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCE
Confidence 456799999999999999987543 234788889999999999999999 8999999999999999999999
Q ss_pred EEecccCCcccCCCCCCceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHH
Q 001275 962 HISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVG 1036 (1109)
Q Consensus 962 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~ 1036 (1109)
+|+|||++........ ......|+..|+|||.+. +..++.++||||+||++|||++|+.||........
T Consensus 161 ~l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~---- 234 (282)
T cd06636 161 KLVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA---- 234 (282)
T ss_pred EEeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh----
Confidence 9999999875532211 122356889999999875 34678899999999999999999999864321110
Q ss_pred HHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1037 WVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
........ .+... ......++.+++.+||+.||++||++.|++++
T Consensus 235 ~~~~~~~~--------~~~~~-------~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 235 LFLIPRNP--------PPKLK-------SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred hhhHhhCC--------CCCCc-------ccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 00000000 00000 01123457778889999999999999999875
No 298
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.98 E-value=9.5e-32 Score=296.56 Aligned_cols=254 Identities=27% Similarity=0.385 Sum_probs=199.4
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|...+.||+|+||.||+|... +++.||+|.+...... .....+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5778899999999999999764 6889999998544332 3566789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++.... .+++..+..++.++++|++||| +.+|+|+||+|+||++++++.+||+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 99999999987632 3788999999999999999999 89999999999999999999999999999987654322
Q ss_pred Cce--eeecccCcccccccccccCC---CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 978 STT--SISVVGTIGYIAPENAFTTA---KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 978 ~~~--~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
... .....++..|+|||++.+.. ++.++||||||+++||+++|+.||....... ......... ....+
T Consensus 155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~----~~~~~~~~~--~~~~~- 227 (264)
T cd06626 155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF----QIMFHVGAG--HKPPI- 227 (264)
T ss_pred cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH----HHHHHHhcC--CCCCC-
Confidence 111 12346788999999988766 7899999999999999999999996432111 111111000 00000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. ........+.+++.+|++.+|++||++.|++.+
T Consensus 228 ~----------~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 228 P----------DSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred C----------cccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0 001112345567889999999999999999865
No 299
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.98 E-value=4.9e-32 Score=301.17 Aligned_cols=252 Identities=22% Similarity=0.335 Sum_probs=200.1
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCC---CCceeeEeeEEecCCceeEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR---HRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.|+..+.||+|+||.||+|.. .+++.||+|.+..........++.+|+.++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467788899999999999976 5689999998865544555667889999999996 999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++++|.++++.. .+++..+..++.|+++|++||| +.+|+||||+|+||+++.++.++++|||++......
T Consensus 82 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 999999999998653 4889999999999999999999 899999999999999999999999999999876543
Q ss_pred CCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 976 PASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
. .......|+..|+|||...++ .++.++|||||||++|+|++|+.||...... ....... .. . .+
T Consensus 155 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~-~~-~-----~~ 220 (277)
T cd06917 155 S--SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIP-KS-K-----PP 220 (277)
T ss_pred c--cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccc-cC-C-----CC
Confidence 2 122334688999999987654 4689999999999999999999998643211 1111000 00 0 00
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.+.. .....++.+++.+|++.||++||++.|++++-+-
T Consensus 221 ~~~~-------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~ 258 (277)
T cd06917 221 RLED-------NGYSKLLREFVAACLDEEPKERLSAEELLKSKWI 258 (277)
T ss_pred CCCc-------ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHh
Confidence 0000 0123456778889999999999999999987543
No 300
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.98 E-value=6.3e-32 Score=301.52 Aligned_cols=269 Identities=21% Similarity=0.319 Sum_probs=198.0
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|+..+.||+|++|.||+|+.. +++.||||++..... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999764 689999998854332 22345788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+. ++|.+++.... ...+++..+..++.|+++|++||| +.+++||||+|+||++++++.+|++|||++........
T Consensus 81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 96 68999887643 345899999999999999999999 88999999999999999999999999999876543211
Q ss_pred CceeeecccCcccccccccccCC-CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccc--h
Q 001275 978 STTSISVVGTIGYIAPENAFTTA-KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD--L 1054 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~ 1054 (1109)
......++..|+|||...+.. ++.++|||||||++|||+||+.||..... .....................+. +
T Consensus 156 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07860 156 --TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVTSLP 232 (284)
T ss_pred --ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCCChhhhhhhhHHH
Confidence 112235688999999887654 58899999999999999999999864321 11222222111111000000000 0
Q ss_pred h-------hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1055 S-------LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1055 ~-------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. ...............++.+++.+|++.||++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 233 DYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0 00000000001112446678889999999999999999976
No 301
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.98 E-value=9.9e-32 Score=297.16 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=198.6
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccc-----cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK-----RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGII 893 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 893 (1109)
+|+..+.||+|+||.||+|.. .+++.||+|.+...... .....+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999965 56899999988543321 124578899999999999999999999999999999
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-cEEEecccCCccc
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-EPHISDFGIAKLL 972 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfGla~~~ 972 (1109)
|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999997643 4789999999999999999999 89999999999999998776 5999999999866
Q ss_pred CCCCCC--ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 973 DKSPAS--TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 973 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
...... .......++..|+|||.+.+..++.++||||+|+++|++++|+.||...... ............. .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~-~--- 228 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASAT-T--- 228 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhccC-C---
Confidence 433111 1112346889999999998888999999999999999999999998533211 1111111100000 0
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.+ ........++.+++.+|++.+|++||++.|++++
T Consensus 229 --~~--------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 229 --AP--------SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred --CC--------CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00 0011223456678889999999999999999875
No 302
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.98 E-value=6.1e-32 Score=298.08 Aligned_cols=255 Identities=22% Similarity=0.380 Sum_probs=200.6
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEec--CCceeEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR--KDCGIIMY 895 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 895 (1109)
+|+..+.||+|+||.||+|.. .+++.||+|.+.... .......+..|++++++++|+||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999965 467899999885433 23334568899999999999999999998764 34578999
Q ss_pred EeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCC--CCCeEEeccCCCCeeeCCCCcEEEecccCCccc
Q 001275 896 RYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDC--DPPIVHRDIKPENILLDSEMEPHISDFGIAKLL 972 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~--~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 972 (1109)
||+++++|.+++.... ....+++..++.++.|+++|++|||..+ +.+|+||||+|+||++++++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 9999999999997642 2346899999999999999999999554 678999999999999999999999999999876
Q ss_pred CCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
..... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||.... .......+.. . ....+
T Consensus 161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~---~--~~~~~- 230 (265)
T cd08217 161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKE---G--KFRRI- 230 (265)
T ss_pred cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhc---C--CCCCC-
Confidence 54322 1223468999999999999889999999999999999999999986532 1111111110 0 00000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......++.+++.+|++.+|++||+++|++++
T Consensus 231 ------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 231 ------------PYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ------------ccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11223456778889999999999999999986
No 303
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.98 E-value=9.6e-32 Score=299.67 Aligned_cols=264 Identities=20% Similarity=0.265 Sum_probs=193.9
Q ss_pred CCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecC--CceeEEEE
Q 001275 821 LNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRK--DCGIIMYR 896 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 896 (1109)
|++.++||+|+||.||+|.. .+++.||+|++.............+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56678899999999999975 4688999998854433333344567999999985 99999999999887 88999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|++ |++.+++.... ..+++..+..++.|++.||+||| +.+|+||||+|+||+++. +.+||+|||+++......
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 997 58888886533 35899999999999999999999 889999999999999999 999999999998664332
Q ss_pred CCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc--------
Q 001275 977 ASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE-------- 1047 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 1047 (1109)
.. ....++..|+|||.... ..++.++||||+||++|||++|+.||..... .+..............
T Consensus 154 ~~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07831 154 PY---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRK 228 (282)
T ss_pred Cc---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhcc
Confidence 21 22467889999997654 5568999999999999999999999854321 1111111111110000
Q ss_pred --cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1048 --INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1048 --~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......+................++.+++.+|++.+|++||+++|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 229 SRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 0000000000000000011234667888899999999999999999976
No 304
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.98 E-value=1.1e-31 Score=300.49 Aligned_cols=248 Identities=23% Similarity=0.273 Sum_probs=199.4
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|...+.||+|+||.||+|... +++.||+|.+..... ......+.+|++++++++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36788899999999999999764 589999998854321 233456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++++|.+++.... .+++..+..++.|+++||+||| +.+|+||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999997643 4889999999999999999999 899999999999999999999999999999866433
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.....+++.|+|||.+.+..++.++||||+|+++|+|++|+.||..... . .............
T Consensus 155 -----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~---~~~~~~~~~~~~~------- 217 (290)
T cd05580 155 -----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP--I---QIYEKILEGKVRF------- 217 (290)
T ss_pred -----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--H---HHHHHHhcCCccC-------
Confidence 2234688999999999888889999999999999999999999864321 1 1111111100000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQLV 1098 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~ 1098 (1109)
. ......+.+++.+||+.+|++|+ +++|+++|-.
T Consensus 218 ------~---~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~ 256 (290)
T cd05580 218 ------P---SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPW 256 (290)
T ss_pred ------C---ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcc
Confidence 0 01123456678899999999999 8888887653
No 305
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.98 E-value=7.8e-32 Score=303.02 Aligned_cols=269 Identities=23% Similarity=0.322 Sum_probs=198.5
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc----cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK----RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
+|+..+.||+|+||.||+|... +++.||+|++...... .....+..|++++++++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999764 6899999998654322 1234567899999999999999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+ +|+|.++++... ..+++..+..++.|+++||+||| +.+|+||||+|+||+++.++.++|+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999997643 35899999999999999999999 89999999999999999999999999999987654
Q ss_pred CCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhh-------cCcc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVW-------SDTE 1046 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~-------~~~~ 1046 (1109)
... ......+++.|+|||.+.+ ..++.++|||||||++|||++|..+|.... ............. ....
T Consensus 155 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 155 PNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS-DIDQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred CCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc-cHHHHHHHHHHcCCCchhhhhhcc
Confidence 321 1122356788999998755 457899999999999999999977665322 1111111111100 0000
Q ss_pred ccccccchhhhHHh-hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1047 EINDIVDLSLMEEM-LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1047 ~~~~~~d~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.............. ..........++.+++.+||+.||++||+++|++++=
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~ 283 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHP 283 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCc
Confidence 00000000000000 0000112235677889999999999999999999983
No 306
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.98 E-value=5.9e-32 Score=302.36 Aligned_cols=265 Identities=24% Similarity=0.332 Sum_probs=200.4
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|++++++++|+||+++++++..++..++|+||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 6888899999999999999765 578999998854332 33356789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++++.+..+.... ..+++..+..++.|+++|++||| +.+++|||++|+||++++++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 82 VERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred CCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 9987777665432 34889999999999999999999 88999999999999999999999999999987654332
Q ss_pred CceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-----------c
Q 001275 978 STTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-----------T 1045 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-----------~ 1045 (1109)
.......++..|+|||++.+. .++.++||||+|+++|+|++|+.||...... +........+.. .
T Consensus 156 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 156 -SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI--DQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred -ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHhhhcccC
Confidence 122335678899999999888 7899999999999999999999988643211 111111111100 0
Q ss_pred cc-----cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1046 EE-----INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1046 ~~-----~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.. .....++....... ......++.+++.+||+.+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRY---PGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccccccCCCCCcHHHHHhc---CCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00 00000000000000 01124567888899999999999999999875
No 307
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.98 E-value=4.8e-32 Score=307.41 Aligned_cols=255 Identities=24% Similarity=0.306 Sum_probs=200.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|+..+.||+|+||+||+|... +++.||+|.+...... .....+.+|++++++++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36788899999999999999765 4899999998654332 24457889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++++|.+++.... ...+++..+..++.|+++|++||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987532 345899999999999999999999 899999999999999999999999999998755322
Q ss_pred CCCc---------------------------eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCc
Q 001275 976 PAST---------------------------TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSY 1028 (1109)
Q Consensus 976 ~~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~ 1028 (1109)
.... ......|+..|+|||+..+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1110 1112468889999999999889999999999999999999999986432
Q ss_pred cccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC----HHHHHHH
Q 001275 1029 KERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN----MRDVVRQ 1096 (1109)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs----~~evl~~ 1096 (1109)
.. .. ........... ........++.+++.+|++.||++||+ ++|++++
T Consensus 237 ~~-~~----~~~~~~~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 237 RD-ET----FSNILKKEVTF--------------PGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred hH-HH----HHHHhcCCccC--------------CCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 21 11 11111100000 000112345677888999999999999 8888886
No 308
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.98 E-value=5.9e-32 Score=300.03 Aligned_cols=255 Identities=25% Similarity=0.334 Sum_probs=197.8
Q ss_pred HhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCC-----
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKD----- 889 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~----- 889 (1109)
++++|+..+.||+|+||.||+|... +++.+++|.+.... .....+.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 5678999999999999999999774 57889999875432 2346789999999999 7999999999987644
Q ss_pred -ceeEEEEeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 890 -CGIIMYRYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 890 -~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
..++||||+++++|.+++.... ....+++..+..++.|+++|++||| +.+++||||+|+||++++++.++++|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 4799999999999999987533 2345899999999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCccccccccccc-----CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhh
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFT-----TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVW 1042 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1042 (1109)
++....... .......++..|+|||++.. ..++.++||||+||++|+|++|+.||...... ..... ..
T Consensus 159 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~----~~ 231 (275)
T cd06608 159 VSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFK----IP 231 (275)
T ss_pred cceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHH----hh
Confidence 987654322 11223568899999998753 34678999999999999999999998643111 11111 00
Q ss_pred cCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1043 SDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1043 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.. ...... .......++.+++.+|++.||++||++.|++++
T Consensus 232 ~~--~~~~~~-----------~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 232 RN--PPPTLK-----------SPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred cc--CCCCCC-----------chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00 000000 011123456678889999999999999999875
No 309
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.98 E-value=4.1e-32 Score=310.50 Aligned_cols=270 Identities=21% Similarity=0.301 Sum_probs=197.5
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-----ce
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-----CG 891 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~ 891 (1109)
+++|.+.++||+|+||.||+|.. .+++.||+|++...........+.+|+.++++++|+||+++++++...+ ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999965 4689999999854333444567889999999999999999999876543 47
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++|+||+++ ++.+++... .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceee
Confidence 999999975 888877642 4899999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCC-ceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhc-Ccccc
Q 001275 972 LDKSPAS-TTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWS-DTEEI 1048 (1109)
Q Consensus 972 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~ 1048 (1109)
....... .......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||..... ......+...... ..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY-LHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCCHHHH
Confidence 5432221 11223568899999998754 5679999999999999999999999854311 1111111111000 00111
Q ss_pred ccccchhhhHHh----------hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1049 NDIVDLSLMEEM----------LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1049 ~~~~d~~~~~~~----------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
..+.+....... .....+....++.+++.+||+.+|++||++.|+++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111111000000 000011123457788999999999999999999998
No 310
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.98 E-value=9.6e-33 Score=327.01 Aligned_cols=253 Identities=26% Similarity=0.417 Sum_probs=189.8
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecC---------
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--------- 888 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 888 (1109)
.+|++.+.||+||||.||+++.+ ||+.||||++...........+.+|+..+.+++|||||+++..|.+.
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 45777889999999999999765 79999999998777666677899999999999999999985421100
Q ss_pred --------------------------------------------------------------------------------
Q 001275 889 -------------------------------------------------------------------------------- 888 (1109)
Q Consensus 889 -------------------------------------------------------------------------------- 888 (1109)
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence
Q ss_pred ------------------------------CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC
Q 001275 889 ------------------------------DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYD 938 (1109)
Q Consensus 889 ------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~ 938 (1109)
...|+-||||+..++.++++..... -.....++++.+|++|++|+|
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~--~~~d~~wrLFreIlEGLaYIH-- 714 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN--SQRDEAWRLFREILEGLAYIH-- 714 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc--hhhHHHHHHHHHHHHHHHHHH--
Confidence 1136788999988888888764421 146778999999999999999
Q ss_pred CCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC----------------CCCCCceeeecccCcccccccccccCC--
Q 001275 939 CDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD----------------KSPASTTSISVVGTIGYIAPENAFTTA-- 1000 (1109)
Q Consensus 939 ~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~-- 1000 (1109)
+.+||||||||.||+++++..|||+|||+|.... ........+..+||.-|+|||+..+..
T Consensus 715 -~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~ 793 (1351)
T KOG1035|consen 715 -DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSN 793 (1351)
T ss_pred -hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccc
Confidence 8999999999999999999999999999998721 011122345678999999999887655
Q ss_pred -CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccc-ccccchhhhHHhhhchhHHHHHHHHHHHHh
Q 001275 1001 -KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEI-NDIVDLSLMEEMLVSSIRDQVIDVLLVALR 1078 (1109)
Q Consensus 1001 -~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~ 1078 (1109)
|+.|+|+||+|||++||+. ||....+ .+..+.......-+. .++ .......-.+++.+
T Consensus 794 ~Yn~KiDmYSLGIVlFEM~y---PF~TsME----Ra~iL~~LR~g~iP~~~~f-------------~~~~~~~e~slI~~ 853 (1351)
T KOG1035|consen 794 KYNSKIDMYSLGIVLFEMLY---PFGTSME----RASILTNLRKGSIPEPADF-------------FDPEHPEEASLIRW 853 (1351)
T ss_pred cccchhhhHHHHHHHHHHhc---cCCchHH----HHHHHHhcccCCCCCCccc-------------ccccchHHHHHHHH
Confidence 8999999999999999984 4543321 111111111000000 111 12233344568889
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 001275 1079 CTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1079 cl~~dP~~RPs~~evl~~ 1096 (1109)
|++.||.+||||.|+++.
T Consensus 854 Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLNS 871 (1351)
T ss_pred HhcCCCccCCCHHHHhhc
Confidence 999999999999999864
No 311
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=6.2e-32 Score=296.97 Aligned_cols=250 Identities=25% Similarity=0.277 Sum_probs=200.3
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+|+..+.||.|+||.||+|... +++.||+|.+..... ....+.+.+|++++++++||||+++++++...+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999775 589999999864332 2345688999999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++++|.+++... ..+++..+..++.|+++|++||| +.+++|+||+|+||++++++.++++|||.+.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999999764 34889999999999999999999 8899999999999999999999999999988654332
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
......|+..|+|||.+.+..++.++|+||+|+++|+|++|+.||...... .............. ..
T Consensus 155 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~---~~----- 221 (258)
T cd05578 155 ---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT--IRDQIRAKQETADV---LY----- 221 (258)
T ss_pred ---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc--HHHHHHHHhccccc---cC-----
Confidence 223356888999999999888999999999999999999999998754321 11111111100000 00
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCH--HHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNM--RDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~--~evl~~ 1096 (1109)
......++.+++.+||+.||.+||++ +|++++
T Consensus 222 --------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 222 --------PATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred --------cccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence 01122456678889999999999999 776643
No 312
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.98 E-value=7.9e-32 Score=302.31 Aligned_cols=247 Identities=22% Similarity=0.333 Sum_probs=195.0
Q ss_pred CceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCC
Q 001275 824 KHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGS 902 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 902 (1109)
...||+|+||.||+|... +++.||+|.+.... ......+.+|+.+++.++||||+++++++..++..++|+||+++++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 446999999999999764 68999999985433 3345668899999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceee
Q 001275 903 LRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSI 982 (1109)
Q Consensus 903 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 982 (1109)
|.+++.. ..+++..++.++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 105 L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~ 175 (297)
T cd06659 105 LTDIVSQ----TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRK 175 (297)
T ss_pred HHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc--cccc
Confidence 9998754 23789999999999999999999 8999999999999999999999999999987553322 1222
Q ss_pred ecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhh
Q 001275 983 SVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLV 1062 (1109)
Q Consensus 983 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 1062 (1109)
...++..|+|||++.+..++.++|||||||++|||++|+.||...... .....+.. ........
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~---~~~~~~~~----------- 239 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRD---SPPPKLKN----------- 239 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc---cCCCCccc-----------
Confidence 356899999999999889999999999999999999999998643211 11111110 00000000
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1063 SSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1063 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
......++.+++.+|++.+|++||+++|++++-.
T Consensus 240 --~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~ 273 (297)
T cd06659 240 --AHKISPVLRDFLERMLTREPQERATAQELLDHPF 273 (297)
T ss_pred --cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChh
Confidence 0011234566788999999999999999999643
No 313
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.98 E-value=9.4e-32 Score=300.38 Aligned_cols=255 Identities=25% Similarity=0.351 Sum_probs=202.6
Q ss_pred HhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.++.|...+.+|+|+||.||+|... +++.||+|++..... ....+.+|++.+++++|+|++++++++...+..++|+
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 3466888889999999999999776 688999999854322 4567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++++|.+++.... ..+++..+..++.|++.|++||| +.+|+|+|++|+||+++.++.++|+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 169 (286)
T cd06614 95 EYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKE 169 (286)
T ss_pred eccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccc
Confidence 9999999999998753 35899999999999999999999 899999999999999999999999999998755432
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.. ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ......... ......+
T Consensus 170 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-----~~~~~~~~~--~~~~~~~-- 238 (286)
T cd06614 170 KS--KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-----RALFLITTK--GIPPLKN-- 238 (286)
T ss_pred hh--hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhc--CCCCCcc--
Confidence 21 112345788999999998888999999999999999999999998543211 011110000 0000000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
......++.+++.+|++.+|.+||++.|++++-.
T Consensus 239 ---------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 272 (286)
T cd06614 239 ---------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPF 272 (286)
T ss_pred ---------hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChH
Confidence 0112234667888999999999999999997653
No 314
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.98 E-value=1.1e-31 Score=300.94 Aligned_cols=269 Identities=22% Similarity=0.297 Sum_probs=197.3
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecC--CceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv 894 (1109)
++|+..+.||+|+||.||+|... +++.+|+|.+...... .....+.+|++++++++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999775 5889999998644322 2234577899999999999999999998877 789999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
+||+++ +|.+++.... ..+++..+..++.|+++||+||| +.+|+||||||+||++++++.++|+|||+++....
T Consensus 85 ~e~~~~-~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVEH-DLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcCc-CHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999974 9999887643 25899999999999999999999 88999999999999999999999999999987654
Q ss_pred CCCCceeeecccCcccccccccccCC-CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-------cc
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTA-KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-------TE 1046 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-------~~ 1046 (1109)
... ......+++.|+|||.+.+.. ++.++|+||+|+++|||++|+.||...... ............. ..
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 159 PLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI-DQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred Ccc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchHHHHHhh
Confidence 321 122345788999999887644 689999999999999999999998643211 1111111110000 00
Q ss_pred ccccccch---hhhHHhhhchhHH--HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1047 EINDIVDL---SLMEEMLVSSIRD--QVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1047 ~~~~~~d~---~~~~~~~~~~~~~--~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
........ ...........+. ....+.+++.+|++.+|++||+++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000 0000000000111 13446678889999999999999999875
No 315
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=1.7e-31 Score=301.37 Aligned_cols=251 Identities=27% Similarity=0.387 Sum_probs=196.1
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+.|...+.||+|+||+||+|... +++.||+|++..... .....++.+|+++++.++||||+++.+++...+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 55888899999999999999764 689999998854322 223456889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||++ |++.+++.... ..+++..+..++.|++.|+.||| +.+|+||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9997 57877775433 24899999999999999999999 899999999999999999999999999998755322
Q ss_pred CCCceeeecccCcccccccccc---cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 976 PASTTSISVVGTIGYIAPENAF---TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
....++..|+|||++. ...++.++||||||+++|||++|+.||...... .......... ....
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~~~~~~~~~~--~~~~- 234 (307)
T cd06607 169 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHIAQND--SPTL- 234 (307)
T ss_pred ------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----HHHHHHhcCC--CCCC-
Confidence 1246788999999874 456789999999999999999999998543211 1111100000 0000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
. ......++.+++.+||+.+|++||++.+++++.+-.
T Consensus 235 ~-----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 271 (307)
T cd06607 235 S-----------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271 (307)
T ss_pred C-----------chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 0 011234567788899999999999999999876543
No 316
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.8e-32 Score=325.80 Aligned_cols=260 Identities=23% Similarity=0.339 Sum_probs=206.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC--------CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCC
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG--------PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKD 889 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 889 (1109)
++....+.+|+|.||.||+|... ....||||.++........+.+..|+++|+.+ +|+||+.++|+|..++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 44455668999999999999542 24679999998777777788999999999999 6999999999999999
Q ss_pred ceeEEEEeccCCCHHHHHhccC---------C--C--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeC
Q 001275 890 CGIIMYRYMENGSLRDVLHSIT---------P--P--PTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLD 956 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~---------~--~--~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~ 956 (1109)
..++|+||++.|+|.++++..+ . . ..++....+.++.|||.|++||+ +.++||||+.++|||++
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEec
Confidence 9999999999999999998766 0 0 23889999999999999999999 89999999999999999
Q ss_pred CCCcEEEecccCCcccCCCCCCcee-eecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHH
Q 001275 957 SEMEPHISDFGIAKLLDKSPASTTS-ISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIV 1035 (1109)
Q Consensus 957 ~~~~~kl~DfGla~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~ 1035 (1109)
++..+||+|||+|+.....+..... ....-+..|||||.+....|+.|+|||||||++||++|...+.++......++.
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~ 532 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELL 532 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHH
Confidence 9999999999999976554433321 111135679999999999999999999999999999995544333322122222
Q ss_pred HHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1036 GWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.+++.-. ..+....+..++++++..||+.+|++||++.|+++.+..
T Consensus 533 ~~l~~G~------------------r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 533 EFLKEGN------------------RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred HHHhcCC------------------CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 2222111 001112335567889999999999999999999999887
No 317
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-33 Score=295.21 Aligned_cols=201 Identities=28% Similarity=0.385 Sum_probs=178.3
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+.|+.-++||+||||.||-++. .+|+.||.|++.++..+ ........|-+++.+++.+.||.+-.+|..++..++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 5678889999999999999955 56899999988544332 33445678999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
..|.||+|.-++...+. +.+++..+..+|.+|+.||++|| ..+||+||+||+|||+|+.|+++|+|.|+|..+...
T Consensus 265 tlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999988877664 56999999999999999999999 899999999999999999999999999999987654
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
.. ....+||.+|||||++.+..|+...|.||+||++|||+.|+.||..
T Consensus 341 ~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~ 388 (591)
T KOG0986|consen 341 KP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ 388 (591)
T ss_pred Cc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence 33 2345899999999999999999999999999999999999999964
No 318
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=1.8e-31 Score=301.02 Aligned_cols=256 Identities=23% Similarity=0.255 Sum_probs=195.2
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
+|...+.||+|+||.||++... .++.||+|.+..... ......+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 6888899999999999999765 578899998854321 2234567899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++++|.+++.... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+|++|||+++......
T Consensus 82 ~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 82 YVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999997643 4889999999999999999999 8999999999999999999999999999987421110
Q ss_pred C-------------CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhc
Q 001275 977 A-------------STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWS 1043 (1109)
Q Consensus 977 ~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1109)
. ........++..|+|||.+.+..++.++|||||||++||+++|+.||..... ..+......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----~~~~~~~~~ 230 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQVIS 230 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHh
Confidence 0 0011123578899999999888899999999999999999999999864321 111111110
Q ss_pred CccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1044 DTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1044 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. ...+.. ......++.+++.+||+.+|++||++.++.+.++.
T Consensus 231 ~~-----~~~~~~--------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 231 DD-----IEWPEG--------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred cc-----cCCCCc--------cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 00 000000 00122345678889999999999985444444443
No 319
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=1.6e-31 Score=300.07 Aligned_cols=271 Identities=19% Similarity=0.254 Sum_probs=195.6
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc-cChHHHHHHHHHHhcCC-CCceeeEeeEEecCCc-----
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDC----- 890 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~----- 890 (1109)
++|+..+.||+|+||.||+|... +++.||+|++...... .....+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999764 6899999987544322 23457888999999995 6999999999887665
Q ss_pred eeEEEEeccCCCHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-CCcEEEeccc
Q 001275 891 GIIMYRYMENGSLRDVLHSITP--PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-EMEPHISDFG 967 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfG 967 (1109)
.++||||+++ ++.+++..... ...+++..+..++.|+++||+||| +.+|+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 89988865432 245899999999999999999999 899999999999999998 8899999999
Q ss_pred CCcccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc-
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT- 1045 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 1045 (1109)
+++....... ......+++.|+|||++.+ ..++.++||||||+++|+|++|+.||...... ..............
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL-QQLLHIFKLLGTPTE 233 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHhCCCCh
Confidence 9886533211 1122356889999998765 45789999999999999999999998643211 11111111100000
Q ss_pred cccccccc-------hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1046 EEINDIVD-------LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1046 ~~~~~~~d-------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
........ +...........+....++.+++.+|++.||++||+++|++.|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00000000 0000000000011233557778889999999999999999876
No 320
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=1.8e-31 Score=302.81 Aligned_cols=273 Identities=22% Similarity=0.309 Sum_probs=197.2
Q ss_pred CCCCCceeecccCeEEEEEEeC---CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecC--Ccee
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG---PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGI 892 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~ 892 (1109)
+|+..++||+|+||.||+|... +++.||+|.+.... .......+.+|++++++++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4777889999999999999764 47899999985432 123345678899999999999999999999988 7899
Q ss_pred EEEEeccCCCHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC----CCcEEEecc
Q 001275 893 IMYRYMENGSLRDVLHSITP--PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS----EMEPHISDF 966 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~----~~~~kl~Df 966 (1109)
+||||+++ ++.+++..... ...+++..+..++.|++.|++||| +.+|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 77777654322 235889999999999999999999 899999999999999999 899999999
Q ss_pred cCCcccCCCCC-CceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCcccc--------ccHHH
Q 001275 967 GIAKLLDKSPA-STTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKER--------TDIVG 1036 (1109)
Q Consensus 967 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~--------~~~~~ 1036 (1109)
|++........ ........++..|+|||++.+. .++.++|||||||++|+|++|+.||....... ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986643322 1122335678899999987764 57899999999999999999999986543221 01111
Q ss_pred HHHHhhcCcc-------ccccccc-------hhhhHHhhhchh---HHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1037 WVRSVWSDTE-------EINDIVD-------LSLMEEMLVSSI---RDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1037 ~~~~~~~~~~-------~~~~~~d-------~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.+........ ...+... ............ .....++.+++.+|++.||++||++.|+++|
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1111100000 0000000 000000000000 0223467889999999999999999999876
No 321
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=1.6e-31 Score=298.03 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=198.7
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
.|...++||+|++|.||+|.. .+++.+|+|++... .......+.+|+.++++++|+||+++++++...+..++|+||+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~ 98 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR-KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL 98 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc-chhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence 455567899999999999975 46889999987432 2333456889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.+++.. ..+++..+..++.|++.|++||| +.+|+||||+|+||+++.++.++++|||.+........
T Consensus 99 ~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~- 170 (285)
T cd06648 99 EGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP- 170 (285)
T ss_pred CCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc-
Confidence 99999999876 23889999999999999999999 89999999999999999999999999998875533211
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
......|+..|+|||...+..++.++||||+||++|||++|+.||..... ........... .+...
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~~~~-------~~~~~- 236 (285)
T cd06648 171 -RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIRDNL-------PPKLK- 236 (285)
T ss_pred -ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHHhcC-------CCCCc-
Confidence 12235688999999999888899999999999999999999999864211 11111111110 00000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
........+.+++.+||+.+|++||++.|++++-.-
T Consensus 237 -----~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (285)
T cd06648 237 -----NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFL 272 (285)
T ss_pred -----ccccCCHHHHHHHHHHcccChhhCcCHHHHccCccc
Confidence 001122456778889999999999999999986443
No 322
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=5.6e-31 Score=290.65 Aligned_cols=251 Identities=20% Similarity=0.277 Sum_probs=192.1
Q ss_pred HHHHHHHhhCCCCCcee--ecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEe
Q 001275 811 LKQVIEATENLNAKHVI--GRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWL 886 (1109)
Q Consensus 811 ~~~~~~~~~~~~~~~~l--G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 886 (1109)
..+.....++|.+.+.+ |+|+||.||++.. .++..+|+|.+....... . |+.....+ +|+||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~--e~~~~~~~~~h~~iv~~~~~~~ 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----I--EPMVHQLMKDNPNFIKLYYSVT 79 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----h--hHHHHHHhhcCCCEEEEEEEEe
Confidence 34445555677777776 9999999999965 467889999874332111 1 22222222 7999999999999
Q ss_pred cCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-cEEEec
Q 001275 887 RKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-EPHISD 965 (1109)
Q Consensus 887 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~D 965 (1109)
..+..++||||+++|+|.+++.... .+++..+..++.|+++|++||| +.+++||||||+||+++.++ .++|+|
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 80 TLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred cCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEec
Confidence 9999999999999999999997643 5899999999999999999999 88999999999999999988 999999
Q ss_pred ccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc
Q 001275 966 FGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT 1045 (1109)
Q Consensus 966 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 1045 (1109)
||+++...... ...++..|+|||++.+..++.++||||+||++|||++|+.||.....+..+...+.... ...
T Consensus 154 fg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~ 226 (267)
T PHA03390 154 YGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK 226 (267)
T ss_pred CccceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc
Confidence 99987654321 23688999999999998999999999999999999999999974433322222222211 000
Q ss_pred cccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC-HHHHHHH
Q 001275 1046 EEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN-MRDVVRQ 1096 (1109)
Q Consensus 1046 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~evl~~ 1096 (1109)
. . ........+.+++.+|++.+|.+||+ ++|+++|
T Consensus 227 --~-~-------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 227 --L-P-------------FIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred --C-C-------------cccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 0 0 01122344667778999999999996 6999875
No 323
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=1.8e-31 Score=307.21 Aligned_cols=269 Identities=20% Similarity=0.244 Sum_probs=197.3
Q ss_pred HHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecC-----
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK----- 888 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----- 888 (1109)
...++|+..+.||+|+||.||+|.. .+++.||+|.+.... .......+.+|+.++++++|+||+++++++...
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 3457899999999999999999966 468999999885322 223345677899999999999999999988643
Q ss_pred -CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 889 -DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 889 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
...++||||++ ++|.+.+... +++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCc
Confidence 24699999996 4888887542 788899999999999999999 8899999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
+++....... .....++..|+|||.+.+..++.++||||+||++|+|++|+.||...... ................
T Consensus 164 ~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 239 (353)
T cd07850 164 LARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLGTPSDE 239 (353)
T ss_pred cceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCCHH
Confidence 9986643221 22346788999999999999999999999999999999999998643211 1111111100000000
Q ss_pred -----------------------cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1048 -----------------------INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1048 -----------------------~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.......................++.+++.+|++.||++||++.|++++=
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~ 312 (353)
T cd07850 240 FMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHP 312 (353)
T ss_pred HHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcCh
Confidence 00000000000000000112234567788899999999999999999874
No 324
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=2.2e-31 Score=291.06 Aligned_cols=250 Identities=27% Similarity=0.379 Sum_probs=200.6
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
.|...+.||+|++|.||+|... +++.+++|++..... .....+.+|++++++++|++++++++++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 3677889999999999999775 688999999854332 35568899999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++++|.+++.... ..+++..+..++.|+++|++||| ..+++||||+|+||++++++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 80 SGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 9999999987642 35899999999999999999999 89999999999999999999999999999987654321
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
.....++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ........ ........
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~--~~~~~~~~----- 219 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM-----KALFKIAT--NGPPGLRN----- 219 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHHh--cCCCCcCc-----
Confidence 23356889999999998888999999999999999999999998643211 11100000 00000000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......++.+++.+|++.||++||++.|++++
T Consensus 220 ------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 220 ------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred ------ccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00012346678889999999999999999876
No 325
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=1.4e-31 Score=298.45 Aligned_cols=268 Identities=22% Similarity=0.328 Sum_probs=197.0
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
|+..+.||+|++|.||+|... +|+.||+|++...... .....+.+|++++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999764 7899999998654322 23456889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
+ ++|.+++..... ..+++..+..++.|+++||+||| +.+++||||+|+||+++.++.++|+|||.++.......
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 81 D-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred C-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 5 699999876442 35899999999999999999999 88999999999999999999999999999976533211
Q ss_pred ceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc-cc-cchh
Q 001275 979 TTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN-DI-VDLS 1055 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~d~~ 1055 (1109)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||..... ........+.......... .. ..+.
T Consensus 155 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07835 155 -TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQLFRIFRTLGTPDEDVWPGVTSLPD 232 (283)
T ss_pred -ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHHhhhhhhchh
Confidence 11223568899999987664 568899999999999999999999864321 1111111111110000000 00 0000
Q ss_pred hhHH-------hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1056 LMEE-------MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1056 ~~~~-------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.... ...........++.+++.+|++.||++||+++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 233 YKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 0000011122456778889999999999999999875
No 326
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.9e-31 Score=301.39 Aligned_cols=272 Identities=24% Similarity=0.332 Sum_probs=198.0
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccccc-ChHHHHHHHHHHhcCCCCceeeEeeEEecC--CceeE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKR-GSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGII 893 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l 893 (1109)
.++|+..+.||+|+||.||+|... +|+.||+|++....... ....+.+|++++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 367889999999999999999764 58999999986443222 234567899999999999999999998754 45799
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
||||+++ +|.+++.... ..+++..+..++.|+++|++||| +.+++||||||+||++++++.+||+|||++....
T Consensus 86 v~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 9999975 8988887543 35899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-cccc-cc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-TEEI-ND 1050 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~-~~ 1050 (1109)
.... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... ......+...... .... ..
T Consensus 160 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~ 235 (309)
T cd07845 160 LPAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQLLGTPNESIWPG 235 (309)
T ss_pred CccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChhhchh
Confidence 4321 1222346788999998865 4578999999999999999999999864321 1111111111110 0000 00
Q ss_pred ccc------hhhhHH---hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1051 IVD------LSLMEE---MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1051 ~~d------~~~~~~---~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
..+ ...... ...........++.+++.+|++.||++||+++|+++|-+-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f 293 (309)
T cd07845 236 FSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF 293 (309)
T ss_pred hhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence 000 000000 0000001123456678889999999999999999987654
No 327
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=5.7e-31 Score=290.02 Aligned_cols=246 Identities=22% Similarity=0.312 Sum_probs=195.9
Q ss_pred eecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 827 IGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
||+|+||.||+|... +++.||+|.+..... ......+.+|++++++++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999775 488999999854332 23456789999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeee
Q 001275 904 RDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSIS 983 (1109)
Q Consensus 904 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 983 (1109)
.+++.... .+++..+..++.|+++|++|+| +.+++|+||+|+||+++.++.++|+|||.+....... ....
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~ 151 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWT 151 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccc
Confidence 99997643 3789999999999999999999 8999999999999999999999999999998764432 1223
Q ss_pred cccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 984 VVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 984 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
..++..|+|||.+.+..++.++|+||+|+++|+|++|+.||.....+. .............. . .
T Consensus 152 ~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~-~---------~--- 215 (262)
T cd05572 152 FCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDILKGNGKL-E---------F--- 215 (262)
T ss_pred ccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHhccCCCC-C---------C---
Confidence 468889999999988889999999999999999999999986543211 11111111000000 0 0
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhh
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRPN-----MRDVVRQLV 1098 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~L~ 1098 (1109)
......++.+++.+||+.+|++||+ ++|+++|-+
T Consensus 216 -~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~ 254 (262)
T cd05572 216 -PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKW 254 (262)
T ss_pred -CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChh
Confidence 0011345777888999999999999 888887544
No 328
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=4.7e-31 Score=299.11 Aligned_cols=252 Identities=27% Similarity=0.394 Sum_probs=195.7
Q ss_pred CCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 821 LNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
|...+.||+|+||.||+|.. .++..||+|++..... ......+.+|++++++++|+|++++++++..++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 66778899999999999976 4688999998854322 22345688999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
++ |++.+++.... ..+++..+..++.++++|+.||| +.+|+||||+|+||+++.++.++|+|||++......
T Consensus 107 ~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 107 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 97 48888775432 34899999999999999999999 899999999999999999999999999998754322
Q ss_pred CceeeecccCcccccccccc---cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 978 STTSISVVGTIGYIAPENAF---TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
....++..|+|||++. .+.++.++|||||||++|||++|+.||...... .....+.. .... .
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~----~~~~--~---- 243 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQ----NESP--T---- 243 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHh----ccCC--C----
Confidence 1246888999999874 456789999999999999999999998643111 11111110 0000 0
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVP 1103 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~ 1103 (1109)
.........+.+++.+|++.+|++||++.|++++.......
T Consensus 244 --------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 244 --------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred --------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 00011223466788899999999999999999988765443
No 329
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=1e-31 Score=300.55 Aligned_cols=257 Identities=26% Similarity=0.328 Sum_probs=192.9
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|...++||+|+||.||++... +++.||+|.+...........+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555678999999999999664 589999999865444445567889999999996 99999999999988899999999
Q ss_pred ccCCCHHHHHhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 898 MENGSLRDVLHSI--TPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 898 ~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
++. ++.++.... .....+++..+..++.++++|++|||+ +.+|+||||||+||+++.++.++|+|||+++.....
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 655543211 112458999999999999999999992 258999999999999999999999999999765432
Q ss_pred CCCceeeecccCcccccccccccC---CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 976 PASTTSISVVGTIGYIAPENAFTT---AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
.. .....|+..|+|||++.+. .++.++||||+||++|||++|+.||.... .............
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~------- 227 (288)
T cd06616 162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGD------- 227 (288)
T ss_pred Cc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCC-------
Confidence 21 1223688899999988776 68999999999999999999999986432 1111111111100
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.+.+.. ........++.+++.+|++.+|++||+++|++++-
T Consensus 228 ~~~~~~----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~ 268 (288)
T cd06616 228 PPILSN----SEEREFSPSFVNFINLCLIKDESKRPKYKELLEHP 268 (288)
T ss_pred CCcCCC----cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000000 00012234567788899999999999999999873
No 330
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=4.5e-31 Score=295.02 Aligned_cols=267 Identities=24% Similarity=0.318 Sum_probs=198.3
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecC--CceeEEEE
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGIIMYR 896 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 896 (1109)
|+..+.||+|+||.||+|... +++.+|+|++.... .......+.+|++++++++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566788999999999999775 58899999996553 233345788999999999999999999999887 78999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
|+++ +|.+++.... ..+++..++.++.|+++|++||| +.+++|+||+|+||++++++.+||+|||.+.......
T Consensus 81 ~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred cccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 9985 8988886542 35899999999999999999999 8899999999999999999999999999998765432
Q ss_pred CCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc--cccccccc
Q 001275 977 ASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT--EEINDIVD 1053 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d 1053 (1109)
. .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... .....+....... .......+
T Consensus 155 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07840 155 S-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQLEKIFELCGSPTDENWPGVSK 231 (287)
T ss_pred c-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCchhhcccccc
Confidence 1 12223457889999997765 45789999999999999999999998653321 1111111111000 00000000
Q ss_pred --------h-hhhHHhhhchhHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1054 --------L-SLMEEMLVSSIRD-QVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1054 --------~-~~~~~~~~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
+ ............. ...++.+++.+|++.+|++||+++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 232 LPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred chhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 0000000001111 24567889999999999999999999875
No 331
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=285.62 Aligned_cols=269 Identities=17% Similarity=0.227 Sum_probs=214.6
Q ss_pred HHHHHhhCCCCCceeecccCeEEEEEEe------CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEe
Q 001275 813 QVIEATENLNAKHVIGRGAHGIVYKASL------GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWL 886 (1109)
Q Consensus 813 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 886 (1109)
++.....+++....+-+|.||.||+|.+ .+.+.|.||.++....+.....+..|.-.+..+.|||+..+.+++.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 3334446677788899999999999954 3445677887766666666778889999999999999999999986
Q ss_pred cC-CceeEEEEeccCCCHHHHHhcc-----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc
Q 001275 887 RK-DCGIIMYRYMENGSLRDVLHSI-----TPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME 960 (1109)
Q Consensus 887 ~~-~~~~lv~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 960 (1109)
+. +..+++|.++.-|+|..|+... ..+..++..+...++.|++.|++||| +.+|||.||.++|.++|+.-+
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~Lq 434 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQ 434 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhhee
Confidence 54 5678999999999999999832 23446788889999999999999999 999999999999999999999
Q ss_pred EEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh-CCCCCCCCccccccHHHHHH
Q 001275 961 PHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT-RKKALDPSYKERTDIVGWVR 1039 (1109)
Q Consensus 961 ~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~ 1039 (1109)
+|++|=.+++.+-..++..-..+...+..||+||.+.+..|+.++|||||||++|||+| |+.|+..-.. .+...++.
T Consensus 435 VkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDP--fEm~~ylk 512 (563)
T KOG1024|consen 435 VKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDP--FEMEHYLK 512 (563)
T ss_pred EEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCH--HHHHHHHh
Confidence 99999999998877766655556677889999999999999999999999999999998 7777643211 11111111
Q ss_pred HhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCCCC
Q 001275 1040 SVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASVPM 1104 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~~~ 1104 (1109)
. ... ....-+++.+++.++.-||..+|++||+++|++.-|.++..+.
T Consensus 513 d----GyR--------------laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 513 D----GYR--------------LAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred c----cce--------------ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 1 100 0112245667888999999999999999999999999985543
No 332
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=3.7e-31 Score=299.35 Aligned_cols=271 Identities=20% Similarity=0.279 Sum_probs=194.9
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecCCc-----
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC----- 890 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 890 (1109)
.++|+..++||+|+||.||+|... +++.||||++...... .....+.+|++++++++||||+++++++...+.
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357889999999999999999764 6899999988544322 223456789999999999999999999876543
Q ss_pred ---eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 891 ---GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 891 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
.++||||+++ ++.+++.... ..+++.++..++.|+++|++||| +.+++|+||||+||+++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~~-~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCEH-DLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCCc-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCC
Confidence 4999999975 8888876532 34899999999999999999999 8899999999999999999999999999
Q ss_pred CCcccCCCCCC--ceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC
Q 001275 968 IAKLLDKSPAS--TTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD 1044 (1109)
Q Consensus 968 la~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
++......... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .....+......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~~~~~~~ 242 (310)
T cd07865 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLISQLCGS 242 (310)
T ss_pred CcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCC
Confidence 99866433221 112234678899999987664 4688999999999999999999988643221 111111111110
Q ss_pred c--cccccc-----cc----hhhhHHhhhch--hHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1045 T--EEINDI-----VD----LSLMEEMLVSS--IRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1045 ~--~~~~~~-----~d----~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. ...... .+ +.......... .......+.+++.+|++.||++||+++|+++|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 0 000000 00 00000000000 00012345678899999999999999999976
No 333
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=5.3e-31 Score=292.85 Aligned_cols=246 Identities=24% Similarity=0.264 Sum_probs=186.0
Q ss_pred eeecccCeEEEEEEe-CCCcEEEEEEeeecccc--cChHHHHHHHHHHh---cCCCCceeeEeeEEecCCceeEEEEecc
Q 001275 826 VIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHK--RGSLSMKREIQTIG---KIRHRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 826 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
.||+|+||.||++.. .+++.+|+|.+...... .....+.+|..+++ ..+|++|+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999976 46889999988544322 12233444544333 3479999999999999899999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.++++|||++........
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~-- 152 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-- 152 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc--
Confidence 999999987543 4899999999999999999999 89999999999999999999999999999875533211
Q ss_pred eeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 980 TSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
....|+..|+|||...+ ..++.++||||+||++|||++|+.||........ .......... ...+
T Consensus 153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~--------~~~~-- 218 (279)
T cd05633 153 --HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTV--------NVEL-- 218 (279)
T ss_pred --cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHHhhcC--------CcCC--
Confidence 22468999999998864 5679999999999999999999999964322111 1110000000 0000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhhh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQLVD 1099 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~~ 1099 (1109)
......++.+++.+|++.||++|| +++|+++|-..
T Consensus 219 ------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~ 258 (279)
T cd05633 219 ------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFF 258 (279)
T ss_pred ------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccc
Confidence 011223566677899999999999 69999998543
No 334
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=3.4e-31 Score=297.40 Aligned_cols=254 Identities=25% Similarity=0.371 Sum_probs=194.7
Q ss_pred hCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 896 (1109)
++|+..+.||+|+||.||+|.... ++.||||.+...........+.+|+.++.+.. |+||+++++++......++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 567888999999999999998765 89999999865443444556777887777774 9999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
|++ +++.++..... ..+++..+.+++.|+++|++||| + .+|+||||+|+||++++++.+||+|||++......
T Consensus 95 ~~~-~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 95 LMS-TCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred ccC-cCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 986 47777765533 25899999999999999999999 5 58999999999999999999999999998765432
Q ss_pred CCCceeeecccCcccccccccccCC----CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccc
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTA----KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDI 1051 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1051 (1109)
.. .....++..|+|||.+.+.. ++.++||||||+++|+|++|+.||.....+. ........... ...
T Consensus 169 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~~--~~~ 239 (296)
T cd06618 169 KA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEF----EVLTKILQEEP--PSL 239 (296)
T ss_pred Cc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHH----HHHHHHhcCCC--CCC
Confidence 21 12235788999999887554 7899999999999999999999986432111 11111111100 000
Q ss_pred cchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1052 VDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1052 ~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.. ......++.+++.+|++.||++||++++++++-+
T Consensus 240 ~~-----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~ 275 (296)
T cd06618 240 PP-----------NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPF 275 (296)
T ss_pred CC-----------CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChh
Confidence 00 0012234677888999999999999999998865
No 335
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=7.7e-31 Score=288.10 Aligned_cols=253 Identities=28% Similarity=0.384 Sum_probs=202.9
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecC--CceeEEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCGIIMY 895 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 895 (1109)
+|...+.||+|++|.||+|... +++.|++|++..... ......+.+|++++++++|+||+++++++... +..++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999776 688999998854332 23456789999999999999999999999988 8899999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++++|.+++.... .+++..+..++.|+++|++||| +.+++|+|++|+||+++.++.++|+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999997644 5899999999999999999999 899999999999999999999999999999876544
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
..........++..|+|||...+..++.++||||+|+++|+|++|+.||..... .......... ......+
T Consensus 155 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~-~~~~~~~---- 225 (260)
T cd06606 155 ETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKIGS-SGEPPEI---- 225 (260)
T ss_pred cccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhccc-cCCCcCC----
Confidence 321122345788999999999888899999999999999999999999865431 1111111110 0000000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......++.+++.+|++.+|++||++.|++++
T Consensus 226 ---------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 226 ---------PEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred ---------CcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 01113456778889999999999999999976
No 336
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=4.3e-31 Score=299.35 Aligned_cols=269 Identities=19% Similarity=0.209 Sum_probs=193.2
Q ss_pred ceeecccCeEEEEEEeCCCcEEEEEEeeec-ccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 825 HVIGRGAHGIVYKASLGPNAVFAVKKLAFR-GHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
+.+|.|+++.||++.. +++.||+|++... ........+.+|++++++++|+||+++++++...+..+++|||+++|+|
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3345555555555544 6899999998654 2344566899999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC-----
Q 001275 904 RDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS----- 978 (1109)
Q Consensus 904 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~----- 978 (1109)
.+++.... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||.+.........
T Consensus 87 ~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~ 162 (314)
T cd08216 87 EDLLKTHF-PEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVH 162 (314)
T ss_pred HHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccc
Confidence 99997643 234788999999999999999999 899999999999999999999999999988755322111
Q ss_pred ceeeecccCccccccccccc--CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC----c------c
Q 001275 979 TTSISVVGTIGYIAPENAFT--TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD----T------E 1046 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~------~ 1046 (1109)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||....... ............ . .
T Consensus 163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 241 (314)
T cd08216 163 DFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKVRGTVPCLLDKSTYPLYED 241 (314)
T ss_pred cccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCccccccCchhhhcC
Confidence 11123457788999998866 357899999999999999999999996432111 111111100000 0 0
Q ss_pred ccc----cccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1047 EIN----DIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1047 ~~~----~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
... ...++................++.+++.+||+.||++||+++|++++-.-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~ 298 (314)
T cd08216 242 SMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFF 298 (314)
T ss_pred CcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchH
Confidence 000 00011111111111112233567788899999999999999999987653
No 337
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=5.8e-31 Score=292.50 Aligned_cols=246 Identities=24% Similarity=0.302 Sum_probs=191.7
Q ss_pred eecccCeEEEEEEe-CCCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 827 IGRGAHGIVYKASL-GPNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
||+|+||+||+|.. .+++.||+|.+..... ......+.+|++++++++||||+++++++...+..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999965 4688999998854321 22344567899999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeee
Q 001275 904 RDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSIS 983 (1109)
Q Consensus 904 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 983 (1109)
.+++..... ..+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++++|||.+...... .....
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~ 153 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIKG 153 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC---Ccccc
Confidence 999976442 35899999999999999999999 899999999999999999999999999998765432 11223
Q ss_pred cccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 984 VVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 984 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
..++..|+|||+..+..++.++||||+||++|+|++|+.||....... ............... .
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~-------------~-- 217 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTLEMAVE-------------Y-- 217 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhcccccccc-------------C--
Confidence 467889999999988889999999999999999999999986542211 111111100000000 0
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQ 1096 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 1096 (1109)
......++.+++.+||+.+|++|| ++.++++|
T Consensus 218 -~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 218 -PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred -CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 011133456778899999999999 77778765
No 338
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=4.3e-32 Score=276.51 Aligned_cols=206 Identities=28% Similarity=0.391 Sum_probs=171.5
Q ss_pred HhhCCCCCceeecccCeEEEEEEeC---C--CcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEec-CC
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLG---P--NAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLR-KD 889 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~---~--~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 889 (1109)
--..|+....||+|.||.||+|... + ...+|+|+++-..+. .-....-+|+..++.++||||+.+..++.. +.
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 3457889999999999999999332 2 237899988544332 224567899999999999999999999887 67
Q ss_pred ceeEEEEeccCCCHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC----CcEEE
Q 001275 890 CGIIMYRYMENGSLRDVLHSITP--PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE----MEPHI 963 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~kl 963 (1109)
..++++||.+. +|..+++.++. ...++...+..|+.||+.|+.||| ++=|+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEe
Confidence 88999999997 89998865432 346888999999999999999999 8889999999999999877 89999
Q ss_pred ecccCCcccCCCCCCc-eeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 964 SDFGIAKLLDKSPAST-TSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 964 ~DfGla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
+|||+++.+...-... .....+.|..|+|||.+.+. .||.+.|||+.|||+.||+|-++.|..
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999999886543322 34557889999999988875 579999999999999999999888754
No 339
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=4.1e-31 Score=296.05 Aligned_cols=259 Identities=17% Similarity=0.188 Sum_probs=181.3
Q ss_pred hCCCCCceeecccCeEEEEEEeCCC----cEEEEEEeeecccccCh----------HHHHHHHHHHhcCCCCceeeEeeE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPN----AVFAVKKLAFRGHKRGS----------LSMKREIQTIGKIRHRNLVRLEDF 884 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~----------~~~~~E~~~l~~l~h~niv~l~~~ 884 (1109)
.+|.+.++||+|+||+||+|...++ ..+|+|........... .....+...+..++|+++++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 5788999999999999999977543 45566643222111100 112233445667789999999997
Q ss_pred EecCC----ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc
Q 001275 885 WLRKD----CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME 960 (1109)
Q Consensus 885 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 960 (1109)
+.... ..++++|++.. ++.+.+.... ..++..+..++.|+++|++||| +.+|+||||||+||+++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhcc-CHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCc
Confidence 66543 33677777643 6666665432 2567888999999999999999 899999999999999999999
Q ss_pred EEEecccCCcccCCCCCC-----ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHH
Q 001275 961 PHISDFGIAKLLDKSPAS-----TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIV 1035 (1109)
Q Consensus 961 ~kl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~ 1035 (1109)
++|+|||+|+.+...... .......||+.|+|||+..+..++.++||||+||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 999999999866422111 111234699999999999999999999999999999999999999965422211111
Q ss_pred HHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1036 GWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
......+ ..+... ... .......+.+++..|++.+|++||+++++++.+
T Consensus 245 ~~~~~~~------~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAKCDFI------KRLHEG----KIK---IKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhHHHHH------HHhhhh----hhc---cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0000000 000000 000 112234566788899999999999999999876
No 340
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=4.4e-31 Score=296.24 Aligned_cols=271 Identities=23% Similarity=0.322 Sum_probs=195.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYR 896 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 896 (1109)
++|+..+.||+|++|+||+|... +++.||+|++..... ......+.+|++++++++|+||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888899999999999999765 688999998854332 2334568899999999999999999999999999999999
Q ss_pred eccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-CCcEEEecccCCcccCCC
Q 001275 897 YMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-EMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 897 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfGla~~~~~~ 975 (1109)
|++ +++.+++.... ....++..+..++.|++.||+||| +.+|+||||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 996 58888876533 234678888899999999999999 889999999999999985 567999999999755332
Q ss_pred CCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc-------
Q 001275 976 PASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE------- 1047 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------- 1047 (1109)
. .......+++.|+|||++.+. .++.++||||+||++|+|+||+.||...... ................
T Consensus 157 ~--~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 157 V--RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred c--cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChhhcccccc
Confidence 1 111224578899999988664 5789999999999999999999998643211 1111111111110000
Q ss_pred cccccc--hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1048 INDIVD--LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1048 ~~~~~d--~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
..+... +................++.+++.+|++.+|++||++.|++++=
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~ 285 (294)
T PLN00009 234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHE 285 (294)
T ss_pred chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 000000 00000000000111234467788899999999999999999863
No 341
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=1.9e-31 Score=292.85 Aligned_cols=251 Identities=23% Similarity=0.357 Sum_probs=198.4
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|...+.||+|+||.||+|... ++..+|+|.+..... ......+.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4777889999999999999765 578899998854322 23445788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-cEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-EPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfGla~~~~~~~ 976 (1109)
+++++|.+++.... ...+++..+..++.|+++|++||| +.+++|+||||+||++++++ .+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 99999999997633 235799999999999999999999 88999999999999998885 46999999998664322
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
. ......|++.|+|||+..+..++.++||||||+++|||++|+.||.... ...++....... .... .
T Consensus 157 ~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~--~~~~-~--- 223 (257)
T cd08225 157 E--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQGY--FAPI-S--- 223 (257)
T ss_pred c--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhccc--CCCC-C---
Confidence 1 1122468899999999988889999999999999999999999985431 112222111110 0000 0
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.....++.+++.+|++.+|++||++.|++++
T Consensus 224 ---------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 224 ---------PNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ---------CCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1112346677889999999999999999976
No 342
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.7e-31 Score=298.34 Aligned_cols=253 Identities=23% Similarity=0.259 Sum_probs=204.6
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccccc-ChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKR-GSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
...|...+.||+|.|++|..|+. .+++.||+|.+.+..... ..+.+.+|+++|+.++|||||+++.+.......|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 35688899999999999999965 569999999886554333 2345889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+.+|.+++|+..++. .....+..++.|+..|++|+| ++.|||||||++||+++.+..+||+|||++.++...
T Consensus 135 eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeeccc
Confidence 99999999999988664 555788899999999999999 999999999999999999999999999999988644
Q ss_pred CCCceeeecccCcccccccccccCCC-CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAK-SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
.. ....+|++.|.|||++.+.+| ++++|+||+|+++|.++.|..||+...-.. . -+.++-.
T Consensus 209 ~~---lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~-----L----------r~rvl~g 270 (596)
T KOG0586|consen 209 LM---LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKE-----L----------RPRVLRG 270 (596)
T ss_pred cc---ccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccc-----c----------cchheee
Confidence 33 344799999999999999888 789999999999999999999998542110 0 0000011
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+..-.. ... .+.-+++.+++-.+|.+|++++++.++-+..
T Consensus 271 k~rIp~---~ms---~dce~lLrk~lvl~Pskr~~~dqim~~~W~n 310 (596)
T KOG0586|consen 271 KYRIPF---YMS---CDCEDLLRKFLVLNPSKRGPCDQIMKDRWRN 310 (596)
T ss_pred eecccc---eee---chhHHHHHHhhccCccccCCHHHhhhhcccc
Confidence 110000 011 2233466789999999999999999987654
No 343
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=5.1e-31 Score=297.00 Aligned_cols=272 Identities=23% Similarity=0.314 Sum_probs=198.1
Q ss_pred HHhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCC----
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD---- 889 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 889 (1109)
.+.++|++.+.||+|+||.||+|... +++.||+|++..... ......+.+|++++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34578999999999999999999775 588999999865432 233456788999999999999999999987654
Q ss_pred ------ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEE
Q 001275 890 ------CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHI 963 (1109)
Q Consensus 890 ------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 963 (1109)
..++|+||+++ ++.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEe
Confidence 78999999986 777777653 235899999999999999999999 899999999999999999999999
Q ss_pred ecccCCcccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhh
Q 001275 964 SDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVW 1042 (1109)
Q Consensus 964 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~ 1042 (1109)
+|||.+........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||..... . .....+....
T Consensus 158 ~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~-~~~~~~~~~~ 234 (302)
T cd07864 158 ADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-L-AQLELISRLC 234 (302)
T ss_pred CcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-H-HHHHHHHHHh
Confidence 99999986644322 11122356788999998765 3568999999999999999999999864321 1 1111111111
Q ss_pred cCc--ccccccc--------chhhh-HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1043 SDT--EEINDIV--------DLSLM-EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1043 ~~~--~~~~~~~--------d~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
... .....+. ++... ..............+.+++.+|++.+|.+||+++|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 235 GSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred CCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 100 0000000 00000 000000001123457788889999999999999999875
No 344
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=2.6e-31 Score=303.62 Aligned_cols=274 Identities=21% Similarity=0.289 Sum_probs=199.6
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEec----CCce
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLR----KDCG 891 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~ 891 (1109)
.++|...+.||+|+||.||+|.. .+++.||+|++..... ......+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 46888999999999999999965 4689999999864332 2345567889999999999999999988753 3457
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++|+||+. |+|.+++.... .+++..+..++.|+++||+||| +.+|+||||||+||++++++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEeccccccee
Confidence 99999996 58999886533 3899999999999999999999 89999999999999999999999999999976
Q ss_pred cCCCCCC--ceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc-c
Q 001275 972 LDKSPAS--TTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE-E 1047 (1109)
Q Consensus 972 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 1047 (1109)
....... .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... ..+............ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~-~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV-HQLKLILSVLGSPSEEV 235 (334)
T ss_pred ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH-HHHHHHHHHhCCChhHh
Confidence 5433221 11123478899999998765 45799999999999999999999999643211 111111110000000 0
Q ss_pred cccccchhhhH---Hh-------hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1048 INDIVDLSLME---EM-------LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1048 ~~~~~d~~~~~---~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.....+..... .. .....+....++.+++.+|++.+|++||+++|++++-+-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~ 297 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhh
Confidence 00000000000 00 000011234567888899999999999999999997654
No 345
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=5.9e-31 Score=293.49 Aligned_cols=266 Identities=23% Similarity=0.346 Sum_probs=196.6
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEEEEec
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
|.+.+.||+|+||+||+|... +++.||+|++.............+|+..+++++ |+|++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566788999999999999875 578899998854433333445567999999998 999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
+|+|.+++.... ...+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 789999887643 235899999999999999999999 89999999999999999999999999999986643222
Q ss_pred ceeeecccCcccccccccc-cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhc--------Cccccc
Q 001275 979 TTSISVVGTIGYIAPENAF-TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWS--------DTEEIN 1049 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~-~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 1049 (1109)
.....++..|+|||++. ...++.++|+||||+++|||++|+.||....... .. ........ ......
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QL-YKICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HH-HHHHHhcCCCChhhhhhHhhhh
Confidence 12346788999999775 4457899999999999999999998885432111 11 10000000 000000
Q ss_pred cccchhhhH---HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1050 DIVDLSLME---EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1050 ~~~d~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
...+..... ............++.+++.+||+.+|++||+++|++.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 000000000 00000011113567889999999999999999999876
No 346
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=2.4e-31 Score=304.11 Aligned_cols=268 Identities=23% Similarity=0.306 Sum_probs=197.2
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-----c
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-----C 890 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~ 890 (1109)
.++|...+.||+|+||+||+|.. .+++.||||.+.... .......+.+|+.+++.++|+||+++++++.... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45788899999999999999965 468999999885432 2333456778999999999999999999876542 4
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.++|+||+. ++|.+++... ..+++..+..++.|+++|++||| +.+++||||||+||+++.++.+||+|||+++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSS---QTLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 799999996 6899888753 34899999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC--ccc
Q 001275 971 LLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD--TEE 1047 (1109)
Q Consensus 971 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~ 1047 (1109)
...... .......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||..... .. ........... ...
T Consensus 157 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~-~~~~~~~~~~~~~~~~ 232 (337)
T cd07858 157 TTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-VH-QLKLITELLGSPSEED 232 (337)
T ss_pred ccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-HH-HHHHHHHHhCCCChHH
Confidence 664332 12223467889999998765 4688999999999999999999999854321 11 11111111110 000
Q ss_pred cccccchhhhHHh----------hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1048 INDIVDLSLMEEM----------LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~----------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
...+.+....... ..........++.+++.+|++.+|++||+++|+++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 233 LGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 0000010000000 000011233557788999999999999999999998
No 347
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.6e-31 Score=319.51 Aligned_cols=276 Identities=19% Similarity=0.277 Sum_probs=188.8
Q ss_pred hhCCCCCceeecccCeEEEEEEeCC--CcEEEEEE--------------eee--cccccChHHHHHHHHHHhcCCCCcee
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGP--NAVFAVKK--------------LAF--RGHKRGSLSMKREIQTIGKIRHRNLV 879 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~~vavK~--------------~~~--~~~~~~~~~~~~E~~~l~~l~h~niv 879 (1109)
.++|++.++||+|+||+||+|..+. +..+++|. +.. .........+.+|++++++++|+|||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 4689999999999999999986532 22222221 100 11112234678999999999999999
Q ss_pred eEeeEEecCCceeEEEEeccCCCHHHHHhccCC--CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC
Q 001275 880 RLEDFWLRKDCGIIMYRYMENGSLRDVLHSITP--PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS 957 (1109)
Q Consensus 880 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 957 (1109)
++++++...+..|+|+|++. +++.+++..... ........+..++.|++.||+||| +.+||||||||+|||++.
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~~ 302 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNC 302 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECC
Confidence 99999999999999999985 578777754221 122345667789999999999999 899999999999999999
Q ss_pred CCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCcc--ccccHH
Q 001275 958 EMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYK--ERTDIV 1035 (1109)
Q Consensus 958 ~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~--~~~~~~ 1035 (1109)
++.+||+|||+++.+..... .......||..|+|||++.+..++.++|||||||++|||++|+.++..... ....+.
T Consensus 303 ~~~vkL~DFGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 303 DGKIVLGDFGTAMPFEKERE-AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCEEEEeCCCceecCcccc-cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 99999999999987643322 122235799999999999999999999999999999999999865432211 111122
Q ss_pred HHHHHhhcCcccccc-------ccchhhhH---HhhhchhH--HHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1036 GWVRSVWSDTEEIND-------IVDLSLME---EMLVSSIR--DQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1036 ~~~~~~~~~~~~~~~-------~~d~~~~~---~~~~~~~~--~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
..+.........+.+ .++..... ........ ....++.+++.+|++.||++||++.|+++|-.
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 221111100000000 00000000 00000000 01134566778999999999999999998754
No 348
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=1.5e-30 Score=290.87 Aligned_cols=267 Identities=25% Similarity=0.311 Sum_probs=195.7
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccccc-ChHHHHHHHHHHhcC---CCCceeeEeeEEecCCc-----
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKR-GSLSMKREIQTIGKI---RHRNLVRLEDFWLRKDC----- 890 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~----- 890 (1109)
|++.+.||+|+||.||+|+.. +++.||+|++....... ....+.+|+.+++++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999876 48999999986443322 234566788777666 59999999999988776
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.+++|||+.+ +|.+++..... ..+++..+..++.|+++||+||| +.+++|+|++|+||+++.++.+||+|||.+.
T Consensus 81 ~~l~~e~~~~-~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVDQ-DLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhccc-CHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence 8999999974 89998876432 35899999999999999999999 8899999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc---c
Q 001275 971 LLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE---E 1047 (1109)
Q Consensus 971 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~ 1047 (1109)
........ ....++..|+|||++.+..++.++|||||||++|||++|+.||..... ......+......... .
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 156 IYSFEMAL---TSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred eccCCccc---ccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcC
Confidence 76433221 223578899999999999999999999999999999999988864321 1112222111110000 0
Q ss_pred cccccchhhh----HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1048 INDIVDLSLM----EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1048 ~~~~~d~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.......... ..............+.+++.+||+.||++||+++|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred CCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000000 000001112233566778899999999999999999875
No 349
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=4.8e-31 Score=294.15 Aligned_cols=267 Identities=22% Similarity=0.327 Sum_probs=198.8
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
|...+.||+|++|.||+|... +++.+|+|++...... .....+.+|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566788999999999999764 6889999988544322 33567889999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
++ ++.+++.... ..+++..+..++.|+++|++||| +.+|+|+||||+||+++.++.++|+|||.+.......
T Consensus 81 ~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-- 152 (283)
T cd05118 81 DT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-- 152 (283)
T ss_pred CC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--
Confidence 75 8888887633 35899999999999999999999 8999999999999999999999999999998665432
Q ss_pred ceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-ccccccccc---
Q 001275 979 TTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-TEEINDIVD--- 1053 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d--- 1053 (1109)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... ............. ........+
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-DQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCchHhcccchhhhh
Confidence 112234678899999988776 7899999999999999999999988543211 1111111110000 000000000
Q ss_pred ---hhhhH---HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1054 ---LSLME---EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1054 ---~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
..... ............++.+++.+||+.||.+||++.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000 00000112234567889999999999999999999876
No 350
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=5.8e-31 Score=299.88 Aligned_cols=270 Identities=18% Similarity=0.250 Sum_probs=193.2
Q ss_pred ceeecc--cCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRG--AHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G--~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
..||+| +||+||+|.. .+++.||+|.+.... .....+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 346666 9999999976 478999999885433 223346788999999999999999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|++.+++..... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.++++||+.+...........
T Consensus 84 ~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 999999876432 34889999999999999999999 89999999999999999999999999986543322111110
Q ss_pred -----eeecccCcccccccccccC--CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc-------
Q 001275 981 -----SISVVGTIGYIAPENAFTT--AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE------- 1046 (1109)
Q Consensus 981 -----~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------- 1046 (1109)
.....++..|+|||++.+. .++.++||||+||++|||++|+.||....... ..............
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQ-MLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHH-HHHHHhcCCCCCCccccccch
Confidence 1112356679999998764 46899999999999999999999986542211 11111000000000
Q ss_pred ----------ccc-cccchh--------hh-HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1047 ----------EIN-DIVDLS--------LM-EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1047 ----------~~~-~~~d~~--------~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
... .+.+.. .. ..............+.+++.+|++.||++|||++|++++-+-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 000 000000 00 000001112344567889999999999999999999987643
No 351
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=2.7e-31 Score=291.48 Aligned_cols=250 Identities=24% Similarity=0.346 Sum_probs=200.6
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|+..++||+|+||.||++.. .+++.+|+|++.... .......+.+|++++++++|+||+++.+++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477889999999999999965 467899999885433 233455678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
+++++|.+++.... ....+++..++.++.|+++|++||| +.+++||||+|+||++++++.+|++|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 99999999986632 2345899999999999999999999 8999999999999999999999999999998765431
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
.....++..|+|||...+..++.++|+||+|+++||+++|+.||...... ........ ......
T Consensus 158 ----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~--~~~~~~----- 221 (256)
T cd08530 158 ----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ-----DLRYKVQR--GKYPPI----- 221 (256)
T ss_pred ----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhc--CCCCCC-----
Confidence 12246888999999999999999999999999999999999998643211 11111100 000000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......++.+++.+|++.+|++||++.|++++
T Consensus 222 --------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 222 --------PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred --------chhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11223457778889999999999999999976
No 352
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=3.1e-31 Score=303.45 Aligned_cols=270 Identities=26% Similarity=0.338 Sum_probs=196.7
Q ss_pred HhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeec-ccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCC--ce
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFR-GHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKD--CG 891 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~--~~ 891 (1109)
..++|...+.||+|+||.||+|... +++.+|+|++... ........+.+|+.+++++ +|+||+++++++...+ ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3467888899999999999999765 5889999988432 2223345677899999999 9999999999986543 57
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++||||++ ++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 5999988753 4789999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCC---ceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc--
Q 001275 972 LDKSPAS---TTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT-- 1045 (1109)
Q Consensus 972 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-- 1045 (1109)
....... .......|+..|+|||.+.+ ..++.++||||||+++|+|++|+.||....... ...... ......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~-~~~~~~~~ 234 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKII-EVIGPPSA 234 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH-HHhCCCCH
Confidence 6433221 12233568999999998765 457899999999999999999999985432211 111110 000000
Q ss_pred ccc--------ccccchh--hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1046 EEI--------NDIVDLS--LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1046 ~~~--------~~~~d~~--~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
... ..+.+.. ...............++.+++.+||+.||++||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 235 EDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000 0000000 00000000011123567788899999999999999999987
No 353
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=8.3e-33 Score=328.84 Aligned_cols=257 Identities=28% Similarity=0.374 Sum_probs=199.7
Q ss_pred hhCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+-++.....||.|.||.||.| ..++|+..|+|-+.... .......+.+|..++..++|||+|+++|+-.+.+..++.|
T Consensus 1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 356777889999999999999 45678999999875432 2344567889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
|||++|+|.+.+...+ ..++.....+..|++.|++||| +.+||||||||.||+++.+|.+|++|||.|..+...
T Consensus 1314 EyC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 9999999999987643 2556666778899999999999 899999999999999999999999999999987654
Q ss_pred C--CCceeeecccCcccccccccccCC---CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 976 P--ASTTSISVVGTIGYIAPENAFTTA---KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 976 ~--~~~~~~~~~gt~~y~aPE~~~~~~---~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
. .........||+.|||||++.+.. ...++||||+|||+.||+||+.||.....+ ..++.-|.. ..
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~aIMy~V~~---gh----- 1458 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WAIMYHVAA---GH----- 1458 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-hHHHhHHhc---cC-----
Confidence 2 122334578999999999998654 467899999999999999999999643222 112111110 00
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.|.+.+ ....+-.+ ++..|++.||++|.++.|++++=..
T Consensus 1459 --~Pq~P~-----~ls~~g~d---Fle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1459 --KPQIPE-----RLSSEGRD---FLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred --CCCCch-----hhhHhHHH---HHHHHHhcCchhhhHHHHHHHhhcc
Confidence 011111 12223333 5559999999999999999887543
No 354
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=7.3e-31 Score=288.12 Aligned_cols=252 Identities=24% Similarity=0.385 Sum_probs=202.4
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|...+.||+|+||.||++... +++.||+|++..... ......+.+|++++++++|+|++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778899999999999999765 688999999855432 24556788999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
+++++|.+++.... ....+++..+..++.+++.|++||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999997642 1346899999999999999999999 8899999999999999999999999999998664432
Q ss_pred CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 977 ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 977 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
.......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ............ ...+
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~--~~~~----- 223 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQ--YPPI----- 223 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCC--CCCC-----
Confidence 12223468889999999988889999999999999999999999986432 111111111100 0000
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
. .....++.+++.+|++.+|++||++.|++++
T Consensus 224 -----~---~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 224 -----P---SQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred -----C---CCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0112346678889999999999999999875
No 355
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=1e-30 Score=292.46 Aligned_cols=247 Identities=23% Similarity=0.364 Sum_probs=194.1
Q ss_pred CceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCC
Q 001275 824 KHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGS 902 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 902 (1109)
..+||+|+||.||+|.. .+++.||+|++... .......+.+|+.++++++|+|++++++++...+..++||||+++++
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 103 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 103 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc-chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCc
Confidence 35699999999999976 46899999987432 23345568899999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceee
Q 001275 903 LRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSI 982 (1109)
Q Consensus 903 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~ 982 (1109)
|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||++....... ....
T Consensus 104 L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~--~~~~ 174 (292)
T cd06657 104 LTDIVTHT----RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRK 174 (292)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceeccccc--cccc
Confidence 99987542 3789999999999999999999 8899999999999999999999999999987554321 1223
Q ss_pred ecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhh
Q 001275 983 SVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLV 1062 (1109)
Q Consensus 983 ~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 1062 (1109)
...++..|+|||...+..++.++||||+||++|+|++|+.||...... ........... .....
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~~~~~--~~~~~------------ 238 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLP--PKLKN------------ 238 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhCC--cccCC------------
Confidence 356889999999998888899999999999999999999998643211 11111111000 00000
Q ss_pred chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1063 SSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1063 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
......++.+++.+|++.+|.+||++.|++++=.
T Consensus 239 --~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~ 272 (292)
T cd06657 239 --LHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 272 (292)
T ss_pred --cccCCHHHHHHHHHHHhCCcccCcCHHHHhcChH
Confidence 0111234556778999999999999999998633
No 356
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=2.1e-30 Score=283.91 Aligned_cols=249 Identities=28% Similarity=0.440 Sum_probs=199.1
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc-cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK-RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|...+.||+|++|.||+|... +++.||+|.+...... .....+.+|++++++++|+|++++++++...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999665 6789999998544321 3446789999999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+++++|.+++... ..+++..+..++.|++.|+.||| +.+|+||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999998764 34899999999999999999999 89999999999999999999999999999987654322
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
. .....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ............ ... .
T Consensus 155 ~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~---~~~-~---- 220 (254)
T cd06627 155 D--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIVQDDH---PPL-P---- 220 (254)
T ss_pred c--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHhccCC---CCC-C----
Confidence 1 2234688899999998888889999999999999999999999864321 111111100000 000 0
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
......+.+++.+|++.+|++||++.|++.+
T Consensus 221 --------~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 221 --------EGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred --------CCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 0112345667889999999999999999864
No 357
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=267.45 Aligned_cols=251 Identities=23% Similarity=0.331 Sum_probs=195.5
Q ss_pred CCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEEEEecc
Q 001275 822 NAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 822 ~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
.....||.|.-|.||+++.. .|...|||.+......+..+++...++++..-+ .|.||+.+|||..+....+.||.|.
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs 174 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS 174 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH
Confidence 34456999999999999765 589999999988777778888888888887775 8999999999999999999999985
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
. ..+..++.... ++++...-++...+..||.||.+ +.+|+|||+||+|||+|+.|.+|++|||.+-.+.+....
T Consensus 175 ~-C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh- 248 (391)
T KOG0983|consen 175 T-CAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH- 248 (391)
T ss_pred H-HHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccc-
Confidence 3 45566655443 37888888999999999999985 678999999999999999999999999999877544332
Q ss_pred eeeecccCccccccccccc---CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 980 TSISVVGTIGYIAPENAFT---TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
....|-+.|||||-+.- ..|+.++||||||+.++|+.||+.||.....+-..+... ..++ .+.+
T Consensus 249 --trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkv----ln~e-------PP~L 315 (391)
T KOG0983|consen 249 --TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKV----LNEE-------PPLL 315 (391)
T ss_pred --ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHH----HhcC-------CCCC
Confidence 23468889999997753 467899999999999999999999996543221111111 1111 1111
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.... ....++.+++..|++.|+.+||...++++|=
T Consensus 316 ~~~~------gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 316 PGHM------GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred Cccc------CcCHHHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 1111 1345577788899999999999999998874
No 358
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=2e-30 Score=290.32 Aligned_cols=253 Identities=24% Similarity=0.294 Sum_probs=194.6
Q ss_pred CCCCCceeecccCeEEEEEEe----CCCcEEEEEEeeeccc---ccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCce
Q 001275 820 NLNAKHVIGRGAHGIVYKASL----GPNAVFAVKKLAFRGH---KRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 891 (1109)
+|++.+.||+|+||.||+|.. .+|+.||+|++..... ......+.+|++++.++ +|++|+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477788999999999999975 3688999999854321 22345678899999999 699999999999988899
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++|+||+++++|.+++.... .+++..+..++.|+++|++||| +.+++||||+|+||++++++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999997643 4788899999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCCceeeecccCcccccccccccC--CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc
Q 001275 972 LDKSPASTTSISVVGTIGYIAPENAFTT--AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN 1049 (1109)
Q Consensus 972 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1109)
...... .......|+..|+|||...+. .++.++||||||+++|+|++|+.||..... ......+...........
T Consensus 155 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~- 231 (290)
T cd05613 155 FHEDEV-ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSEPPY- 231 (290)
T ss_pred cccccc-cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhccCCCC-
Confidence 543221 112234688999999988753 467899999999999999999999853211 111122221111111000
Q ss_pred cccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHH
Q 001275 1050 DIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQ 1096 (1109)
Q Consensus 1050 ~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~ 1096 (1109)
.......+.+++.+|++.||++|| ++++++++
T Consensus 232 ---------------~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 232 ---------------PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ---------------CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 011223456678899999999997 77888776
No 359
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=3.7e-31 Score=291.79 Aligned_cols=247 Identities=23% Similarity=0.329 Sum_probs=192.9
Q ss_pred eecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 827 IGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
||+|+||.||+|... +++.+|+|.+..... ......+.+|++++++++|+||+++++.+..++..++|+||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999876 489999998854322 23456788999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC------
Q 001275 904 RDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA------ 977 (1109)
Q Consensus 904 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~------ 977 (1109)
.++++... .+++..+..++.|+++||+||| +.+++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99997643 4899999999999999999999 89999999999999999999999999999875533211
Q ss_pred CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhh
Q 001275 978 STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLM 1057 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 1057 (1109)
........++..|+|||...+..++.++||||||+++|++++|+.||...... .............
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~--------- 220 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQNILNGKIEW--------- 220 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCcCC---------
Confidence 11223356788999999998888999999999999999999999998643211 1111111100000
Q ss_pred HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1058 EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1058 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
.........+.+++.+|++.+|++||++.++.+.+.
T Consensus 221 -----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 221 -----PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -----CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 000001345667888999999999999955554444
No 360
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=1.1e-30 Score=299.45 Aligned_cols=274 Identities=21% Similarity=0.261 Sum_probs=199.8
Q ss_pred cHHHHHHHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEec
Q 001275 810 LLKQVIEATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR 887 (1109)
Q Consensus 810 ~~~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 887 (1109)
...++..++++|...+.||+|+||.||+|.. .+++.||+|++.... .......+.+|++++++++|+||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456677889999999999999999999965 568999999885422 22234567889999999999999999998764
Q ss_pred C------CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcE
Q 001275 888 K------DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEP 961 (1109)
Q Consensus 888 ~------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 961 (1109)
. ...+++++++ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||++++++.+
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCE
Confidence 3 2357777776 78998887642 3889999999999999999999 8999999999999999999999
Q ss_pred EEecccCCcccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHH
Q 001275 962 HISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRS 1040 (1109)
Q Consensus 962 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~ 1040 (1109)
||+|||+++..... .....++..|+|||...+ ..++.++||||+||++|||++|+.||..... ..........
T Consensus 160 kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~ 233 (345)
T cd07877 160 KILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRL 233 (345)
T ss_pred EEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHH
Confidence 99999998854322 123467889999998766 4678999999999999999999999854321 1111111111
Q ss_pred hhcCccc-cccccchhhhHHhh-------h----chhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1041 VWSDTEE-INDIVDLSLMEEML-------V----SSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1041 ~~~~~~~-~~~~~d~~~~~~~~-------~----~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
....... ...+.+ ....... . ........++.+++.+|++.||++||++.|+++|=.
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~ 302 (345)
T cd07877 234 VGTPGAELLKKISS-ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 302 (345)
T ss_pred hCCCCHHHHhhccc-HhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChh
Confidence 1100000 000000 0000000 0 000012345678888999999999999999998754
No 361
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=1.4e-30 Score=287.32 Aligned_cols=253 Identities=26% Similarity=0.318 Sum_probs=194.3
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc----cccChHHHHHHHHHHhcCCCCceeeEeeEEecC--Cce
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG----HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--DCG 891 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~ 891 (1109)
.+|++.+.||+|+||.||+|.. .++..||+|.+.... .......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999976 458999999874322 123345788999999999999999999998764 457
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++|+||+++++|.+++.... .+++..+.+++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999987543 3788899999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCC-CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 972 LDKSPA-STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 972 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
...... ........++..|+|||...+..++.++|||||||++|++++|+.||..... ............. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~---~ 228 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA----MAAIFKIATQPTK---P 228 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH----HHHHHHHHcCCCC---C
Confidence 543211 1111235688999999999988899999999999999999999999864311 1111111110000 0
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
. .+ ......+.+++.+|++ +|.+||++.+++.|.
T Consensus 229 ~---------~p---~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 229 M---------LP---DGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred C---------CC---cccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 0 01 1112335557779998 579999999988763
No 362
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=273.53 Aligned_cols=201 Identities=26% Similarity=0.324 Sum_probs=175.1
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|+..++||+|.||+|-.++. .+++.||+|++++.. .+...+.-..|-++++..+||.+..+-..+...++.|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 6788899999999999999965 468999999985543 2233445667899999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+.||.|+-++... ..+++.....+-..|+.||.||| +.+||.||+|.+|.|+|.||++||+|||+++.--.
T Consensus 248 eyanGGeLf~HLsre---r~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~- 320 (516)
T KOG0690|consen 248 EYANGGELFFHLSRE---RVFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK- 320 (516)
T ss_pred EEccCceEeeehhhh---hcccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhccc-
Confidence 999999999888653 35888888889999999999999 99999999999999999999999999999985332
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
...+...++|||.|.|||++....|+.++|.|.+||++|||++|+.||...
T Consensus 321 -~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~ 371 (516)
T KOG0690|consen 321 -YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK 371 (516)
T ss_pred -ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc
Confidence 233445689999999999999999999999999999999999999999753
No 363
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=4.7e-30 Score=285.16 Aligned_cols=246 Identities=22% Similarity=0.234 Sum_probs=185.6
Q ss_pred eeecccCeEEEEEEe-CCCcEEEEEEeeecccccC--hHHHHHHH---HHHhcCCCCceeeEeeEEecCCceeEEEEecc
Q 001275 826 VIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRG--SLSMKREI---QTIGKIRHRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 826 ~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~E~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
+||+|+||.||+|.. .+++.||+|.+........ ...+..|. +.++...||+|+++.+++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999966 4588999998854332211 12233343 34445589999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+|+|.+++... ..+++..+..++.|+++|++||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 81 g~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~-- 152 (278)
T cd05606 81 GGDLHYHLSQH---GVFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP-- 152 (278)
T ss_pred CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC--
Confidence 99999988653 34899999999999999999999 89999999999999999999999999999876533211
Q ss_pred eeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 980 TSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
....|+..|+|||.+.++ .++.++||||+||++|||++|+.||........ .......... ....
T Consensus 153 --~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~--------~~~~-- 218 (278)
T cd05606 153 --HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTM--------AVEL-- 218 (278)
T ss_pred --cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHhhcc--------CCCC--
Confidence 234689999999998754 689999999999999999999999965422111 0000000000 0000
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCC-----CHHHHHHHhhh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRP-----NMRDVVRQLVD 1099 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~evl~~L~~ 1099 (1109)
. .....++.+++.+|++.+|.+|| ++.|++++-+-
T Consensus 219 ---~---~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~ 258 (278)
T cd05606 219 ---P---DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF 258 (278)
T ss_pred ---C---CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccc
Confidence 0 01123466677899999999999 99999986543
No 364
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=1.1e-30 Score=290.89 Aligned_cols=251 Identities=25% Similarity=0.363 Sum_probs=200.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 894 (1109)
++|...+.||+|+||.||+|... +++.||+|++.... .......+.+|++++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999764 68999999885422 2233467889999999998 99999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999997643 4899999999999999999999 89999999999999999999999999999986643
Q ss_pred CCCC------------------ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHH
Q 001275 975 SPAS------------------TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVG 1036 (1109)
Q Consensus 975 ~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~ 1036 (1109)
.... .......++..|+|||...+..++.++||||+|+++|++++|+.||..... ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~ 229 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-----YL 229 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-----HH
Confidence 3211 122234678899999999888899999999999999999999999864321 11
Q ss_pred HHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCH----HHHHHH
Q 001275 1037 WVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNM----RDVVRQ 1096 (1109)
Q Consensus 1037 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~----~evl~~ 1096 (1109)
............ .......+.+++.+|++.+|++||++ +|+++|
T Consensus 230 ~~~~~~~~~~~~----------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 230 TFQKILKLEYSF----------------PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHhcCCCC----------------CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 111111000000 01113446678889999999999999 888775
No 365
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=1.1e-30 Score=299.28 Aligned_cols=268 Identities=20% Similarity=0.259 Sum_probs=193.4
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCC------
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD------ 889 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 889 (1109)
..+|...+.||+|+||.||+|.. .+++.||+|++.... .......+.+|++++++++|+||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 37898999999999999999975 468999999885432 2223456889999999999999999999986543
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
..++|+||+.. ++.++.. ..+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+|++|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 45899999974 7776653 23789999999999999999999 889999999999999999999999999998
Q ss_pred cccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccc
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEI 1048 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 1048 (1109)
+..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+..............
T Consensus 165 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 165 RHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGPEF 238 (342)
T ss_pred cCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHH
Confidence 755322 123467889999998876 46789999999999999999999999643211 11111111000000000
Q ss_pred ccccch----hhh-------HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH--hhhC
Q 001275 1049 NDIVDL----SLM-------EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ--LVDA 1100 (1109)
Q Consensus 1049 ~~~~d~----~~~-------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~--L~~~ 1100 (1109)
....+. ... .............++.+++.+|++.||++||+++|++.| +++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 000000 000 000000001123456788889999999999999999977 4443
No 366
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.7e-30 Score=295.52 Aligned_cols=270 Identities=22% Similarity=0.311 Sum_probs=197.8
Q ss_pred HHHHhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEec-CCc
Q 001275 814 VIEATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR-KDC 890 (1109)
Q Consensus 814 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 890 (1109)
+..++++|+..+.||+|+||.||+|... +++.||+|++.... .......+.+|++++++++||||+++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456788999999999999999999654 78999999875432 22345678899999999999999999999865 457
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.++|+||+ +++|.++++.. .+++..+..++.|+++|++||| +.+|+||||+|+||++++++.++++|||.+.
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~ 156 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLAR 156 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCcccccc
Confidence 88999998 56898888642 3778888899999999999999 8999999999999999999999999999987
Q ss_pred ccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc-c
Q 001275 971 LLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE-I 1048 (1109)
Q Consensus 971 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~ 1048 (1109)
..... .....++..|+|||.+.+ ..++.++||||+|+++|+|++|+.||..... ......+.......... .
T Consensus 157 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 157 IQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-VNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred ccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHH
Confidence 54321 122467889999998766 5689999999999999999999999854321 11111111110000000 0
Q ss_pred ccccchhh---hHHh-------hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1049 NDIVDLSL---MEEM-------LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1049 ~~~~d~~~---~~~~-------~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
....+... .... ..........++.+++.+|++.+|++||+++|++.+=
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~ 289 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHP 289 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCC
Confidence 00000000 0000 0000011235677788899999999999999999883
No 367
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=2.3e-30 Score=289.49 Aligned_cols=257 Identities=25% Similarity=0.269 Sum_probs=196.3
Q ss_pred CCCCCceeecccCeEEEEEEe----CCCcEEEEEEeeeccc---ccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCce
Q 001275 820 NLNAKHVIGRGAHGIVYKASL----GPNAVFAVKKLAFRGH---KRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 891 (1109)
+|+..+.||+|+||.||+++. .+++.||||.+..... ......+.+|++++.++ +|+||+++++++...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999964 3578899998854321 22345688999999999 599999999999988999
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++||||+++|+|.+++.... .+++..+..++.|+++|++||| +.+++||||+|+||+++.++.++++|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999987532 4889999999999999999999 89999999999999999999999999999886
Q ss_pred cCCCCCCceeeecccCcccccccccccCC--CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc
Q 001275 972 LDKSPASTTSISVVGTIGYIAPENAFTTA--KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN 1049 (1109)
Q Consensus 972 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1109)
...... .......|+..|+|||...+.. .+.++||||+|+++|||++|+.||.... .......+...........
T Consensus 155 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~~~~- 231 (288)
T cd05583 155 FLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDG-EQNSQSEISRRILKSKPPF- 231 (288)
T ss_pred cccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCc-ccchHHHHHHHHHccCCCC-
Confidence 543321 1122346889999999887665 6889999999999999999999985321 1111111111111110000
Q ss_pred cccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1050 DIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1050 ~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.......+.+++.+|++.||++|||++++.+.|...
T Consensus 232 ---------------~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~ 267 (288)
T cd05583 232 ---------------PKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHP 267 (288)
T ss_pred ---------------CcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence 011123456678899999999999988776666543
No 368
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.8e-30 Score=293.00 Aligned_cols=253 Identities=25% Similarity=0.363 Sum_probs=194.7
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+.|...+.||+|+||.||+|... +++.+|+|.+.... ......++.+|+++++.++|+|++++.+++...+..++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666788999999999999764 57889999885322 2223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+. |++.+++.... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9997 58888775433 34789999999999999999999 889999999999999999999999999998765322
Q ss_pred CCCceeeecccCcccccccccc---cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 976 PASTTSISVVGTIGYIAPENAF---TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
....++..|+|||.+. ...++.++|||||||++|+|++|+.||...... .....+.. .. ....
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~----~~--~~~~- 234 (308)
T cd06634 169 ------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQ----NE--SPAL- 234 (308)
T ss_pred ------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHHHHHhh----cC--CCCc-
Confidence 1246788999999874 356788999999999999999999998543111 00111100 00 0000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhCCC
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDASV 1102 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~~~ 1102 (1109)
. .......+.+++.+||+.+|++||++.+++++.+....
T Consensus 235 --------~---~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 235 --------Q---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred --------C---cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 0 01122345667889999999999999999998776543
No 369
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.3e-30 Score=297.49 Aligned_cols=269 Identities=24% Similarity=0.290 Sum_probs=200.7
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCC-----cee
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD-----CGI 892 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~ 892 (1109)
+|.+.+.||+|+||.||+|... +++.||+|++..... ....+.+.+|++++++++|+||+++.+++...+ ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999765 489999998854332 344567899999999999999999999988765 789
Q ss_pred EEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCccc
Q 001275 893 IMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLL 972 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 972 (1109)
+||||++ ++|.++++... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++|+|||.+...
T Consensus 81 lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999998 48998887543 5899999999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCC-ceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc----
Q 001275 973 DKSPAS-TTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE---- 1046 (1109)
Q Consensus 973 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 1046 (1109)
...... .......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||...... .....+........
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~ 231 (330)
T cd07834 154 DPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDL 231 (330)
T ss_pred cccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHh
Confidence 543210 112334678899999999887 7899999999999999999999998643211 11111111110000
Q ss_pred ------ccccccch-hh-hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1047 ------EINDIVDL-SL-MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1047 ------~~~~~~d~-~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.....+.. .. .........+....++.+++.+||+.+|++||++++++++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 290 (330)
T cd07834 232 KFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHP 290 (330)
T ss_pred hhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCc
Confidence 00000000 00 00000000112245677888999999999999999999973
No 370
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.5e-30 Score=294.46 Aligned_cols=270 Identities=24% Similarity=0.316 Sum_probs=195.3
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccccc-ChHHHHHHHHHHhcCCCCceeeEeeEEecCC------
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKR-GSLSMKREIQTIGKIRHRNLVRLEDFWLRKD------ 889 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 889 (1109)
.++|...++||+|+||.||+|... +++.||+|++....... ....+.+|++++++++|+||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999764 68899999986543322 2346788999999999999999999875433
Q ss_pred --ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 890 --CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 890 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
..++|+||+++ ++.+.+... ...+++..+..++.|+++||+||| +.+|+||||||+||++++++.++|+|||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENP--SVKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCc
Confidence 35999999975 677776543 235899999999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCCCc---------eeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHH
Q 001275 968 IAKLLDKSPAST---------TSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGW 1037 (1109)
Q Consensus 968 la~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~ 1037 (1109)
+++......... ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...... ......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~ 239 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLI 239 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHH
Confidence 998654322111 11234678889999987654 5789999999999999999999998643221 111111
Q ss_pred HHHhhcCc--------ccccccc----chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1038 VRSVWSDT--------EEINDIV----DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1038 ~~~~~~~~--------~~~~~~~----d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.. .+... ....... ...... ...........++.+++.+|++.||++||++.|++.+
T Consensus 240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 240 FK-LCGTPTEETWPGWRSLPGCEGVHSFTNYPR-TLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HH-HhCCCChhhchhhhhcccccccccCCCCCc-cHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 11 11000 0000000 000000 0000111223567788999999999999999999875
No 371
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=3.5e-30 Score=283.43 Aligned_cols=242 Identities=22% Similarity=0.283 Sum_probs=183.1
Q ss_pred ceeecccCeEEEEEEe-CCCcEEEEEEeeeccc--ccChHHHHHHHHHH-hcCCCCceeeEeeEEecCCceeEEEEeccC
Q 001275 825 HVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH--KRGSLSMKREIQTI-GKIRHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.||+|+||.||+|.. .+++.||+|.+..... ......+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4699999999999976 4588999998854321 11223344554444 455899999999999999999999999999
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||+++....
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 99999997643 4788999999999999999999 88999999999999999999999999999875432
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
.....++..|+|||...+..++.++||||+|+++|||++|..||...... ............. ...
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~----~~~----- 215 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-----AVFDNILSRRINW----PEE----- 215 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHhcccCC----CCc-----
Confidence 12246888999999998888899999999999999999999998643211 1111110000000 000
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVR 1095 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 1095 (1109)
.......++.+++.+|++.+|++||++.++.+
T Consensus 216 ---~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 216 ---VKEFCSPEAVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred ---ccccCCHHHHHHHHHHccCCHHHccCCCcHHH
Confidence 00112345677888999999999997654433
No 372
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=2e-30 Score=289.00 Aligned_cols=266 Identities=23% Similarity=0.329 Sum_probs=198.1
Q ss_pred CCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 821 LNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
|+..+.||+|+||.||+|... +++.||+|.+.... .......+..|++++++++|+|++++++++...+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456778999999999999775 48999999986543 2333467788999999999999999999999999999999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
+ ++|.+++.... ..+++..+..++.++++|++||| +.+|+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 8 59999998642 34899999999999999999999 88999999999999999999999999999986643321
Q ss_pred ceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc-------ccc--
Q 001275 979 TTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT-------EEI-- 1048 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------~~~-- 1048 (1109)
......++..|+|||.+.+. .++.++||||+||++||+++|+.||...... .............. ...
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred -ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCcHHHHHhhccccc
Confidence 12224567789999988776 7899999999999999999999888543211 11111111000000 000
Q ss_pred -ccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1049 -NDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1049 -~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
..... ................++.+++.+|++.+|++||++.|++.+
T Consensus 232 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 232 YKPTFP-KFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred cccccc-ccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000 000000000011123567888999999999999999999876
No 373
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=3.5e-30 Score=294.57 Aligned_cols=272 Identities=22% Similarity=0.267 Sum_probs=196.8
Q ss_pred hCCCC-CceeecccCeEEEEEEeC-CCcEEEEEEeeeccccc-------------ChHHHHHHHHHHhcCCCCceeeEee
Q 001275 819 ENLNA-KHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKR-------------GSLSMKREIQTIGKIRHRNLVRLED 883 (1109)
Q Consensus 819 ~~~~~-~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~niv~l~~ 883 (1109)
++|.. .+.||+|+||+||+|... +++.||+|++....... ....+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45553 567999999999999754 68999999885432221 1125778999999999999999999
Q ss_pred EEecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEE
Q 001275 884 FWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHI 963 (1109)
Q Consensus 884 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 963 (1109)
++...+..++||||++ |+|.+++.... .+++.....++.|+++|++||| +.+|+||||+|+||+++.++.+++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEE
Confidence 9999999999999997 59999886532 4889999999999999999999 899999999999999999999999
Q ss_pred ecccCCcccCCCCC------------CceeeecccCcccccccccccCC-CCccCcchhhHHHHHHHHhCCCCCCCCccc
Q 001275 964 SDFGIAKLLDKSPA------------STTSISVVGTIGYIAPENAFTTA-KSKESDVYSYGVVLLELITRKKALDPSYKE 1030 (1109)
Q Consensus 964 ~DfGla~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~ 1030 (1109)
+|||.+........ ........++..|+|||.+.+.. ++.++||||+||++|||++|+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999986641110 11112235688899999887644 689999999999999999999998643221
Q ss_pred cccHHHHHHHhhcCccc--ccccc--------chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1031 RTDIVGWVRSVWSDTEE--INDIV--------DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~~--~~~~~--------d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+....+......... ..... .... .............++.+++.+|++.+|++||+++|++.+-+--
T Consensus 241 --~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~ 317 (335)
T PTZ00024 241 --DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRK-PKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317 (335)
T ss_pred --HHHHHHHHHhCCCchhhCcchhhcccccccCcCC-cccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence 111111111110000 00000 0000 0000000111234567788899999999999999999876544
No 374
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.9e-30 Score=297.16 Aligned_cols=268 Identities=20% Similarity=0.257 Sum_probs=195.3
Q ss_pred HHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc-ccChHHHHHHHHHHhcCCCCceeeEeeEEecCC----
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH-KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKD---- 889 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 889 (1109)
...++|...+.||+|+||.||+|.. .+++.||||++..... ......+.+|++++++++||||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3457899999999999999999964 5789999998843222 223456789999999999999999999887543
Q ss_pred --ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 890 --CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 890 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
..++||||+ +++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.++++|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKHE----KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999999 67999887642 3889999999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcc
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTE 1046 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 1046 (1109)
++....... ....+++.|+|||.+.+ ..++.++|+||+||++|++++|+.||...... ...............
T Consensus 164 ~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~ 237 (343)
T cd07880 164 LARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCH
Confidence 998653321 23467889999998876 45789999999999999999999998643211 111111110000000
Q ss_pred ccc-cccch---hhhH-------HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1047 EIN-DIVDL---SLME-------EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1047 ~~~-~~~d~---~~~~-------~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
... .+... .... .............+.+++.+|++.||++||++.+++++-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~ 299 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHP 299 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000 00000 0000 000000011233567888899999999999999999653
No 375
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-31 Score=266.02 Aligned_cols=256 Identities=22% Similarity=0.291 Sum_probs=194.7
Q ss_pred HhhCCCC-CceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEec----CC
Q 001275 817 ATENLNA-KHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLR----KD 889 (1109)
Q Consensus 817 ~~~~~~~-~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~----~~ 889 (1109)
.+++|.+ .++||-|-.|.|..+.. .+++.+|+|++.. .....+|++.--+. .|||||.++++|.. ..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence 3445544 36799999999999954 5689999998732 23456788876555 69999999999764 34
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC---CCcEEEecc
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS---EMEPHISDF 966 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~Df 966 (1109)
...+|||.|+||.|+..+...+ ...+++.++..|+.||+.|+.||| +.+|.||||||+|+|... +-.+|++||
T Consensus 133 cLLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eeEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEeccc
Confidence 5689999999999999998755 345999999999999999999999 999999999999999964 446899999
Q ss_pred cCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccc--cHHHHHHHhhcC
Q 001275 967 GIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERT--DIVGWVRSVWSD 1044 (1109)
Q Consensus 967 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~--~~~~~~~~~~~~ 1044 (1109)
|+|+.-.. .......+.|+.|.|||++...+|+..+|+||+||++|-|++|.+||+...+... .....++. .
T Consensus 209 GFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~---g 282 (400)
T KOG0604|consen 209 GFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRT---G 282 (400)
T ss_pred ccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhc---c
Confidence 99986543 2333446889999999999999999999999999999999999999976533211 11111100 0
Q ss_pred ccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1045 TEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1045 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
. -++.+ +.+..-.++..++++.++..+|++|.|+.|++.|-+-.
T Consensus 283 q---y~FP~---------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~ 326 (400)
T KOG0604|consen 283 Q---YEFPE---------PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWIN 326 (400)
T ss_pred C---ccCCC---------hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhc
Confidence 0 01111 11223334455567789999999999999999887644
No 376
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-30 Score=244.05 Aligned_cols=270 Identities=22% Similarity=0.346 Sum_probs=203.6
Q ss_pred CCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccC-hHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRG-SLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+|...++||+|.||+||+|+. ++++.||+|++....+.++ .....+|+-+++.++|+|||+++++...+...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 466678899999999999965 5688999999976655544 45788999999999999999999999888999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
|.. +|..|...... .++.+.+..++.|+.+|+.++| +.++.|||+||.|.+++.+|+.|++|||+++-++-+
T Consensus 83 cdq-dlkkyfdslng--~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgip-- 154 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-- 154 (292)
T ss_pred hhH-HHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc--
Confidence 965 88888877543 4889999999999999999999 999999999999999999999999999999976532
Q ss_pred CceeeecccCcccccccccccCC-CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccc----cccc
Q 001275 978 STTSISVVGTIGYIAPENAFTTA-KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEI----NDIV 1052 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 1052 (1109)
.......+.|..|++|+++.+.+ |+...|+||.|||+.|+.....|..|+.+-..++..+++......+.- ..+.
T Consensus 155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lp 234 (292)
T KOG0662|consen 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLP 234 (292)
T ss_pred eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCC
Confidence 22334567899999999998865 689999999999999999877777666544444554444332221110 1111
Q ss_pred chhhhHHhh-hchhHHHHHH----HHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1053 DLSLMEEML-VSSIRDQVID----VLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1053 d~~~~~~~~-~~~~~~~~~~----l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
|....+... .....+.+++ =.++..+.+.-+|..|.++++++++-
T Consensus 235 dyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhp 284 (292)
T KOG0662|consen 235 DYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHP 284 (292)
T ss_pred CCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCc
Confidence 111111000 0011122221 13355567778999999999998863
No 377
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=1.4e-30 Score=298.25 Aligned_cols=269 Identities=21% Similarity=0.292 Sum_probs=191.7
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecC---------
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK--------- 888 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 888 (1109)
.+|...+.||.|+||.||+|.. .+++.||+|++.... ......+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC-CchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 5788899999999999999966 468899999885433 34456788999999999999999999776543
Q ss_pred -----CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-CCcEE
Q 001275 889 -----DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-EMEPH 962 (1109)
Q Consensus 889 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~k 962 (1109)
...++|+||++ ++|.+++... .+++..+..++.|+++|++||| +.+|+||||||+||+++. ++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEE
Confidence 34689999997 5898888642 3889999999999999999999 889999999999999974 56789
Q ss_pred EecccCCcccCCCCCC-ceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHH
Q 001275 963 ISDFGIAKLLDKSPAS-TTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRS 1040 (1109)
Q Consensus 963 l~DfGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~ 1040 (1109)
++|||.++........ .......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .........
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~-~~~~~~~~~ 234 (342)
T cd07854 156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL-EQMQLILES 234 (342)
T ss_pred ECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh
Confidence 9999999765332111 11122457889999997654 55788999999999999999999999644221 111111111
Q ss_pred hhcC-cccccccc---chhhh------HHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1041 VWSD-TEEINDIV---DLSLM------EEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1041 ~~~~-~~~~~~~~---d~~~~------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.... ........ ..... .............++.+++.+|++.||++||++.|+++|=
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~ 301 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHP 301 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCC
Confidence 0000 00000000 00000 0000000011224567788899999999999999999763
No 378
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=5.5e-30 Score=289.71 Aligned_cols=246 Identities=28% Similarity=0.402 Sum_probs=190.1
Q ss_pred CCCCceeecccCeEEEEEEe-CCCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 821 LNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
|...++||+|+||+||+|+. .+++.||+|++..... ......+.+|++++++++|+|++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55567899999999999976 4688999998854322 22235688899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+. |++.+++.... ..+++..+..++.|++.|++||| +.+|+||||+|+||+++.++.+||+|||++......
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~-- 174 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA-- 174 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC--
Confidence 96 58888776432 34889999999999999999999 889999999999999999999999999998643211
Q ss_pred CceeeecccCcccccccccc---cCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 978 STTSISVVGTIGYIAPENAF---TTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
....|+..|+|||++. ...++.++|||||||++|||++|+.||..... ........... ......
T Consensus 175 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~--~~~~~~- 242 (313)
T cd06633 175 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQND--SPTLQS- 242 (313)
T ss_pred ----CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhcC--CCCCCc-
Confidence 1346888999999874 45678899999999999999999999854321 11111111000 000000
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
......+.+++.+|++.+|++||++.|++++-
T Consensus 243 -----------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~ 274 (313)
T cd06633 243 -----------NEWTDSFRGFVDYCLQKIPQERPASAELLRHD 274 (313)
T ss_pred -----------cccCHHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 01112356677899999999999999999873
No 379
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=2.4e-30 Score=284.74 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=192.2
Q ss_pred CCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeec---c-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEE
Q 001275 820 NLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFR---G-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~---~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv 894 (1109)
+|.+.++||+|+||.||++.... +..+++|.++.. . .......+.+|+.++++++||||+++++++...+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47788999999999999996643 444555554321 1 223344677899999999999999999999988899999
Q ss_pred EEeccCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 895 YRYMENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
+||+++++|.+++.... ....+++..++.++.|+++|++||| +.+++|+|++|+||+++. +.++++|||.+....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 99999999999887532 2346899999999999999999999 899999999999999975 569999999987664
Q ss_pred CCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccc
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVD 1053 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 1053 (1109)
.... ......++..|+|||...+..++.++|+||+|+++|+|++|+.||.... ............ .
T Consensus 157 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~-------~ 222 (260)
T cd08222 157 GSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRIVEGP-------T 222 (260)
T ss_pred CCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHcCC-------C
Confidence 3221 1223467889999999888888999999999999999999999985321 111111111100 0
Q ss_pred hhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1054 LSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1054 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
+.. ......++.+++.+|++.+|++||++.|++++
T Consensus 223 ~~~--------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 223 PSL--------PETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCC--------cchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 000 01222356678889999999999999999986
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=3e-31 Score=286.43 Aligned_cols=248 Identities=22% Similarity=0.311 Sum_probs=194.4
Q ss_pred CceeecccCeEEEEEEe-CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCC
Q 001275 824 KHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENG 901 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 901 (1109)
.++||+|.||+||-|+. ++|+.||||++.+.. ..+....+.+|+.++.+++||.||.+...|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 57899999999999955 679999999995543 3344567899999999999999999999999999999999999764
Q ss_pred CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC---CcEEEecccCCcccCCCCCC
Q 001275 902 SLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE---MEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 902 sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfGla~~~~~~~~~ 978 (1109)
-|.-++.. +...+++.....++.||+.||.||| .++|||+||||+|||+... ..+||+|||+|+.......
T Consensus 649 MLEMILSs--EkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF- 722 (888)
T KOG4236|consen 649 MLEMILSS--EKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF- 722 (888)
T ss_pred HHHHHHHh--hcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhh-
Confidence 44444443 2345888889999999999999999 8999999999999999653 4699999999998865432
Q ss_pred ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhH
Q 001275 979 TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLME 1058 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1058 (1109)
....+||+.|.|||++..+.|...-|+||.|||+|.-++|..||... +++.+.+... .-++.
T Consensus 723 --RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIndQIQNA-------aFMyP----- 784 (888)
T KOG4236|consen 723 --RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDINDQIQNA-------AFMYP----- 784 (888)
T ss_pred --hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchhHHhhcc-------ccccC-----
Confidence 33579999999999999999999999999999999999999999633 3333222110 00101
Q ss_pred HhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1059 EMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1059 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
...+.+...+.++++...++..-.+|-+.++.+.|-+
T Consensus 785 ---p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~W 821 (888)
T KOG4236|consen 785 ---PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPW 821 (888)
T ss_pred ---CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence 1112333344555666888888889999888776543
No 381
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=4.9e-30 Score=292.83 Aligned_cols=270 Identities=23% Similarity=0.287 Sum_probs=191.1
Q ss_pred CCCCCceeecccCeEEEEEEeC-C--CcEEEEEEeeeccc-ccChHHHHHHHHHHhcC-CCCceeeEeeEEecC----Cc
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-P--NAVFAVKKLAFRGH-KRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRK----DC 890 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~----~~ 890 (1109)
+|+..+.||+|+||.||+|... . +..||+|++..... ......+.+|+++++++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4677889999999999999764 3 67899998854322 22345678899999999 599999999875432 34
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.++++||++ ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 678888886 68999886533 4889999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCC--ceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-cc
Q 001275 971 LLDKSPAS--TTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-TE 1046 (1109)
Q Consensus 971 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~ 1046 (1109)
........ .......|+..|+|||+..+ ..++.++||||+||++|++++|+.||...... ......+...... ..
T Consensus 154 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 154 GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEE 232 (332)
T ss_pred ecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 65432211 11223578999999998765 46799999999999999999999998643211 0111111100000 00
Q ss_pred ccccccchhhh---H---Hh----hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1047 EINDIVDLSLM---E---EM----LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1047 ~~~~~~d~~~~---~---~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
....+..+... . .. ...........+.+++.+|++.||++||+++|++++=
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~ 293 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHP 293 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 00000000000 0 00 0000011134577788899999999999999998764
No 382
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=1.6e-30 Score=297.89 Aligned_cols=267 Identities=22% Similarity=0.292 Sum_probs=196.2
Q ss_pred HHhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCc---
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC--- 890 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--- 890 (1109)
...++|...+.||+|+||.||+|... +++.||+|++.... .......+.+|+.++++++|+|++++.+++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34578899999999999999999775 57899999875322 22334567789999999999999999988766554
Q ss_pred ---eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEeccc
Q 001275 891 ---GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFG 967 (1109)
Q Consensus 891 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 967 (1109)
.++|+||+ +++|.+++.. ..+++..+..++.|+++|++||| +.+|+||||||+||++++++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 5699998875 24899999999999999999999 8999999999999999999999999999
Q ss_pred CCcccCCCCCCceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC-c
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD-T 1045 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~ 1045 (1109)
++...... .....++..|+|||...+ ..++.++||||+||++||+++|+.||...... .....+...... .
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~--~~~~~i~~~~~~~~ 236 (343)
T cd07851 164 LARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI--DQLKRIMNLVGTPD 236 (343)
T ss_pred cccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHhcCCCC
Confidence 99865432 123467889999998765 36789999999999999999999998543211 111111111100 0
Q ss_pred cc-cccccchh---hhHH-------hhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1046 EE-INDIVDLS---LMEE-------MLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1046 ~~-~~~~~d~~---~~~~-------~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.. ...+.... .... ...........++.+++.+|++.+|++|||+.|+++|-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~ 299 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHP 299 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCC
Confidence 00 00000000 0000 00000011235677888999999999999999998864
No 383
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.1e-29 Score=277.61 Aligned_cols=241 Identities=24% Similarity=0.319 Sum_probs=192.4
Q ss_pred eecccCeEEEEEEeC-CCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCH
Q 001275 827 IGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSL 903 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 903 (1109)
||+|+||.||++... +++.+|+|.+...... .....+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999765 5889999988544322 2355788999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeee
Q 001275 904 RDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSIS 983 (1109)
Q Consensus 904 ~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~ 983 (1109)
.+++.... .+++..+..++.|+++|+.|+| +.+++|+||+|+||+++.++.++++|||++....... .....
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~ 152 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNT 152 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccC
Confidence 99997643 4889999999999999999999 8999999999999999999999999999998664332 12233
Q ss_pred cccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 984 VVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 984 ~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
..++..|+|||...+...+.++|+||||+++|++++|+.||..... ................
T Consensus 153 ~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~------------- 214 (250)
T cd05123 153 FCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKDPLRFPE------------- 214 (250)
T ss_pred CcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcCCCCCCC-------------
Confidence 5688899999999888889999999999999999999999854321 1111111111100100
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCH---HHHHHH
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRPNM---RDVVRQ 1096 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RPs~---~evl~~ 1096 (1109)
....++.+++.+|+..||++||++ +++++|
T Consensus 215 ---~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 215 ---FLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred ---CCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 112345668889999999999999 666554
No 384
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.3e-31 Score=309.68 Aligned_cols=263 Identities=23% Similarity=0.289 Sum_probs=204.5
Q ss_pred HHHHHHhhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecC
Q 001275 812 KQVIEATENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK 888 (1109)
Q Consensus 812 ~~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 888 (1109)
+++....++|.+.++||+|+||.|..++.+ ++++||.|++.+... ......|..|-.+|..-+.+.|++++..|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 344445688999999999999999999774 588999999854321 23456788999999999999999999999999
Q ss_pred CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccC
Q 001275 889 DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGI 968 (1109)
Q Consensus 889 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 968 (1109)
.+.|+|||||+||+|-..+.... .++++.+..++..|.-||+-+| +.|+|||||||+|||+|..|++|++|||.
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGs 221 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGS 221 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchh
Confidence 99999999999999999998765 4888999999999999999999 99999999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCcccccccccc----c-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAF----T-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWS 1043 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1109)
+..+...+ .......+|||-|.+||++. + +.|+..+|.||+||++|||+.|..||+.. .+++.......
T Consensus 222 Clkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-----slveTY~KIm~ 295 (1317)
T KOG0612|consen 222 CLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-----SLVETYGKIMN 295 (1317)
T ss_pred HHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----HHHHHHHHHhc
Confidence 98876443 33344579999999999875 3 67899999999999999999999999743 12222222111
Q ss_pred CccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC---HHHHHHHhhh
Q 001275 1044 DTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN---MRDVVRQLVD 1099 (1109)
Q Consensus 1044 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~evl~~L~~ 1099 (1109)
-...+ .+. .....++++.+++. +.+ -+|+.|.. ++|+..|-.-
T Consensus 296 hk~~l-~FP--------~~~~VSeeakdLI~---~ll-~~~e~RLgrngiedik~HpFF 341 (1317)
T KOG0612|consen 296 HKESL-SFP--------DETDVSEEAKDLIE---ALL-CDREVRLGRNGIEDIKNHPFF 341 (1317)
T ss_pred hhhhc-CCC--------cccccCHHHHHHHH---HHh-cChhhhcccccHHHHHhCccc
Confidence 10000 000 00113445555443 322 57888877 9999888643
No 385
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=1.6e-29 Score=311.52 Aligned_cols=146 Identities=27% Similarity=0.390 Sum_probs=129.9
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++|.+.++||+|+||+||+|... +++.||+|++..... ......+.+|+.++..++|+||+++++++...+..|+||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999775 689999999854322 222357889999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
||+++++|.++++... .+++..++.++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997643 3788999999999999999999 8899999999999999999999999999986
No 386
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.8e-31 Score=262.83 Aligned_cols=273 Identities=21% Similarity=0.352 Sum_probs=196.6
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccC-hHHHHHHHHHHhcCCCCceeeEeeEEecC--------C
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRG-SLSMKREIQTIGKIRHRNLVRLEDFWLRK--------D 889 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------~ 889 (1109)
.|....+||+|.||.||+|+.+ +|+.||+|++-....+++ .....+|++++..++|+|++.+++.|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 4555678999999999999654 577889887644333332 44678999999999999999999988542 2
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
..|+||++|+. +|...+... ...++..++.+++.++..||.|+| ...|+|||+||.|||++.++.+||+|||++
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 47999999987 888877543 234888999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCC--CceeeecccCccccccccccc-CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHH-------
Q 001275 970 KLLDKSPA--STTSISVVGTIGYIAPENAFT-TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVR------- 1039 (1109)
Q Consensus 970 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~------- 1039 (1109)
+.+...+. ....+..+.|..|++||.+.+ +.|+++.|||..|||+.||+||.+-+...... .. ...+.
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteq-qq-l~~Is~LcGs~t 249 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQ-QQ-LHLISQLCGSIT 249 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHH-HH-HHHHHHHhccCC
Confidence 86643322 222445678999999998876 56899999999999999999999887654322 11 11222
Q ss_pred -HhhcCcccccc--ccchhhhHHhhhchhHHHHH------HHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1040 -SVWSDTEEIND--IVDLSLMEEMLVSSIRDQVI------DVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1040 -~~~~~~~~~~~--~~d~~~~~~~~~~~~~~~~~------~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.+|..-+.+.- -+......+.......+... +..+++..++..||.+|+++++++.|-.-.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~ 319 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW 319 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence 22322211110 00000000000001111111 455677789999999999999999987544
No 387
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.6e-30 Score=272.49 Aligned_cols=268 Identities=21% Similarity=0.247 Sum_probs=200.6
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCC-C-C----ceeeEeeEEecCCc
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-H-R----NLVRLEDFWLRKDC 890 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h-~----niv~l~~~~~~~~~ 890 (1109)
+++|.+...+|+|.||.|-++.. ..+..||+|+++ .........+-|++++.++. + | -+|.+.+|+...++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik--~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIK--NVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHH--HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 67899999999999999999944 447899999873 33444455677999999993 2 2 37889999999999
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-------------
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS------------- 957 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~------------- 957 (1109)
.|+|+|.+ |-|+++++..+.. .+++...+..++.|+++++++|| +.+++|.||||+||++.+
T Consensus 166 iCivfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~ 240 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKV 240 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCcc
Confidence 99999998 4499999987543 45888999999999999999999 999999999999999831
Q ss_pred -------CCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccc
Q 001275 958 -------EMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKE 1030 (1109)
Q Consensus 958 -------~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~ 1030 (1109)
+..+|++|||.|+.-.... ...+.|..|+|||++.+-.++.++||||+|||++|+.||...|.... +
T Consensus 241 ~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHe-n 314 (415)
T KOG0671|consen 241 CFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHE-N 314 (415)
T ss_pred ceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCC-c
Confidence 2358999999998654433 34688999999999999999999999999999999999999886433 2
Q ss_pred cccHHHHHHHhhcCcc---------------c-----------cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCC
Q 001275 1031 RTDIVGWVRSVWSDTE---------------E-----------INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKP 1084 (1109)
Q Consensus 1031 ~~~~~~~~~~~~~~~~---------------~-----------~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 1084 (1109)
.+.+...-+...+-.. . ...+.++...-.........+..++++++.+|+..||
T Consensus 315 ~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 315 LEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred HHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 2211111110000000 0 0001111111111112233556779999999999999
Q ss_pred CCCCCHHHHHHHhh
Q 001275 1085 SNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1085 ~~RPs~~evl~~L~ 1098 (1109)
.+|+|++|+++|-.
T Consensus 395 ~~RiTl~EAL~HpF 408 (415)
T KOG0671|consen 395 ARRITLREALSHPF 408 (415)
T ss_pred cccccHHHHhcCHH
Confidence 99999999998754
No 388
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.2e-30 Score=274.46 Aligned_cols=259 Identities=25% Similarity=0.371 Sum_probs=192.7
Q ss_pred hCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeeccccc------ChHHHHHHHHHHhcCCCCceeeEeeEEec-CCc
Q 001275 819 ENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRGHKR------GSLSMKREIQTIGKIRHRNLVRLEDFWLR-KDC 890 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 890 (1109)
++|-....||+|||+.||+| +....+.||||+-....... ..+...+|.++-+.+.||.||++++|+.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 45666788999999999999 55678899999764332221 13456789999999999999999999875 467
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeC---CCCcEEEeccc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLD---SEMEPHISDFG 967 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~DfG 967 (1109)
+|-|.|||+|-+|+-|++..+ .++++++..|+.||+.||.||. +.+++|+|-||||.|||+- ..|.+||+|||
T Consensus 543 FCTVLEYceGNDLDFYLKQhk---lmSEKEARSIiMQiVnAL~YLN-EikpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHK---LMSEKEARSIIMQIVNALKYLN-EIKPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ceeeeeecCCCchhHHHHhhh---hhhHHHHHHHHHHHHHHHHHHh-ccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 899999999999999998765 4899999999999999999998 4488999999999999994 45789999999
Q ss_pred CCcccCCCCCCce-----eeecccCcccccccccccC----CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHH
Q 001275 968 IAKLLDKSPASTT-----SISVVGTIGYIAPENAFTT----AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWV 1038 (1109)
Q Consensus 968 la~~~~~~~~~~~-----~~~~~gt~~y~aPE~~~~~----~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~ 1038 (1109)
+++.++.+.+... ..-..||..|++||.+.-+ ..+.|+||||.|||+|+.+.|+.||..... ..++...-
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs-QQdILqeN 697 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS-QQDILQEN 697 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh-HHHHHhhh
Confidence 9999976654321 2235799999999976533 358899999999999999999999965422 22222111
Q ss_pred HHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1039 RSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1039 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
... ...++.--.. +.... +...++++|+++--++|.+..++..+
T Consensus 698 TIl--kAtEVqFP~K---------PvVss---eAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 698 TIL--KATEVQFPPK---------PVVSS---EAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred chh--cceeccCCCC---------CccCH---HHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 000 0000100000 01122 23346669999988888888776543
No 389
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-31 Score=267.32 Aligned_cols=254 Identities=26% Similarity=0.305 Sum_probs=192.2
Q ss_pred CCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 823 AKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 823 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
....||.|+||+|+|-.+ ..|+..|||++.......+.+++..|.+...+- +.||||+++|.+..++.-++.||.|.-
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~ 147 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDI 147 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhh
Confidence 345699999999999965 468999999998777777788898998876665 799999999999999999999999964
Q ss_pred CCHHHHHhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCC
Q 001275 901 GSLRDVLHSI--TPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAS 978 (1109)
Q Consensus 901 gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~ 978 (1109)
|++.+.+.. .....+++...-.|......||+||.. ...|+|||+||+|||++..|.+|++|||.+-.+...-.
T Consensus 148 -SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA- 223 (361)
T KOG1006|consen 148 -SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA- 223 (361)
T ss_pred -hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHH-
Confidence 666544321 123457888888888889999999985 56899999999999999999999999999876643322
Q ss_pred ceeeecccCccccccccccc--CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 979 TTSISVVGTIGYIAPENAFT--TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 979 ~~~~~~~gt~~y~aPE~~~~--~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
.+.-.|-..|||||-+.. ..|+.++||||+|+++||+.||+.|+..... +.+.+..+.....+.-. .+
T Consensus 224 --kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----vfeql~~Vv~gdpp~l~-~~--- 293 (361)
T KOG1006|consen 224 --KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----VFEQLCQVVIGDPPILL-FD--- 293 (361)
T ss_pred --hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----HHHHHHHHHcCCCCeec-Cc---
Confidence 223467889999997763 3589999999999999999999999864322 23333333222111100 00
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
....+....+..++--|+.+|-..||+.+++.++
T Consensus 294 ------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 294 ------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ------ccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 0111233456677779999999999999998764
No 390
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=285.65 Aligned_cols=243 Identities=23% Similarity=0.289 Sum_probs=192.0
Q ss_pred hhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
++.|.....+|.|+|+.|-.+.. .+++..+||++... ..+-.+|+.++... +||||+++.+.+.+..+.|+||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc-----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 45677777899999999999854 56788999998544 23345677776666 7999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeee-CCCCcEEEecccCCcccCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILL-DSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll-~~~~~~kl~DfGla~~~~~ 974 (1109)
|++.+|-+.+.+..... .. ..+..|+.+++.|+.||| .++|||||+||+|||+ ++.++++|+|||.++....
T Consensus 396 e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred hhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 99999988887766442 23 677789999999999999 8999999999999999 6899999999999987754
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
. ....+-|..|.|||+.....|++++|+||+|+++|+|++|+.||.....+ .++.. .... .
T Consensus 469 ~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~---~i~~-~--------- 529 (612)
T KOG0603|consen 469 S-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHT---RIQM-P--------- 529 (612)
T ss_pred h-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHH---hhcC-C---------
Confidence 4 22246788999999999999999999999999999999999999755433 11111 1110 0
Q ss_pred hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1055 SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1055 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. .....+.+++ ++.+|++.||.+||+|+|+..|-+.
T Consensus 530 ~~-----s~~vS~~AKd---Ll~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 530 KF-----SECVSDEAKD---LLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cc-----ccccCHHHHH---HHHHhccCChhhCcChhhhccCcch
Confidence 00 0123344444 5569999999999999999988776
No 391
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=2.6e-29 Score=272.19 Aligned_cols=219 Identities=21% Similarity=0.213 Sum_probs=172.6
Q ss_pred ccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCHHHHHh
Q 001275 830 GAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSLRDVLH 908 (1109)
Q Consensus 830 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 908 (1109)
|.||.||++.. .+++.||+|++.... .+.+|...+....||||+++++++...+..++||||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 88999999965 468899999985432 23445555566679999999999999999999999999999999987
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCc
Q 001275 909 SITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTI 988 (1109)
Q Consensus 909 ~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~ 988 (1109)
... .+++..+..++.|+++|++|+| +.+|+||||||+||++++++.++++|||.+....... ....++.
T Consensus 78 ~~~---~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~ 146 (237)
T cd05576 78 KFL---NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVEN 146 (237)
T ss_pred Hhc---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcCc
Confidence 643 3899999999999999999999 8999999999999999999999999999887554321 1235677
Q ss_pred ccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHH
Q 001275 989 GYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQ 1068 (1109)
Q Consensus 989 ~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 1068 (1109)
.|+|||...+..++.++||||+|+++|||++|+.|+....... .... .. .. + ...
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------~~~~---~~---~~-----~---~~~ 201 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-----------NTHT---TL---NI-----P---EWV 201 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------cccc---cc---CC-----c---ccC
Confidence 8999999988889999999999999999999998764321100 0000 00 00 0 011
Q ss_pred HHHHHHHHHhccCCCCCCCCCH
Q 001275 1069 VIDVLLVALRCTEKKPSNRPNM 1090 (1109)
Q Consensus 1069 ~~~l~~l~~~cl~~dP~~RPs~ 1090 (1109)
..++.+++.+|++.||++||++
T Consensus 202 ~~~~~~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 202 SEEARSLLQQLLQFNPTERLGA 223 (237)
T ss_pred CHHHHHHHHHHccCCHHHhcCC
Confidence 2345667889999999999997
No 392
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.7e-30 Score=269.92 Aligned_cols=201 Identities=26% Similarity=0.341 Sum_probs=171.8
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc--cChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 894 (1109)
.+|+...+||+|+||.|-.|..+ +.+.||||++++.... .+..--+.|-+++..- +-|.++++..++..-+..|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888999999999999999554 5688999998654322 2223345566777666 578999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|||+.||+|.-+++..+. +.+..+..+|.+||-||-+|| +++|+.||||.+|||++.+|++||+|||+++.---
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999998887664 777888899999999999999 99999999999999999999999999999985432
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
+ ..+....+||+.|+|||++...+|+..+|.|||||++|||+.|+.||++.
T Consensus 503 ~--~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 503 D--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred C--CcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 2 23445689999999999999999999999999999999999999999865
No 393
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=5.2e-29 Score=286.84 Aligned_cols=256 Identities=22% Similarity=0.309 Sum_probs=203.0
Q ss_pred HHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEec-----C
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLR-----K 888 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-----~ 888 (1109)
..+..|.+.++||.|.+|.||+++. ++++.+|+|+.... .....+++.|.++++.. .|||++.++|++.. +
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~--~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT--EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC--ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 3456788899999999999999954 56888899877433 33345678899999888 69999999999864 4
Q ss_pred CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccC
Q 001275 889 DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGI 968 (1109)
Q Consensus 889 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 968 (1109)
+..++|||||.+||.-|.++... ...+.|+.+.-|+.+++.|+.+|| ...++|||+|-.|||+++++.+|++|||+
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeee
Confidence 67899999999999999998765 567999999999999999999999 89999999999999999999999999999
Q ss_pred CcccCCCCCCceeeecccCccccccccccc-----CCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhc
Q 001275 969 AKLLDKSPASTTSISVVGTIGYIAPENAFT-----TAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWS 1043 (1109)
Q Consensus 969 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~ 1043 (1109)
+..++.... ......||+.|||||++.. ..|+..+|+||+|++..||.-|.+|+...... +..+.
T Consensus 170 SaQldsT~g--rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm--------raLF~ 239 (953)
T KOG0587|consen 170 SAQLDSTVG--RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM--------RALFL 239 (953)
T ss_pred eeeeecccc--cccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh--------hhhcc
Confidence 988765432 2234689999999998863 34678999999999999999999998543221 11111
Q ss_pred CccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1044 DTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1044 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
+..-..+.++ .......++.+++..|+..|-++||++.++++|-
T Consensus 240 ----IpRNPPPkLk------rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hp 283 (953)
T KOG0587|consen 240 ----IPRNPPPKLK------RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHP 283 (953)
T ss_pred ----CCCCCCcccc------chhhHHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence 0111112221 1234556677788899999999999999998874
No 394
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=1.8e-28 Score=294.28 Aligned_cols=267 Identities=21% Similarity=0.233 Sum_probs=168.4
Q ss_pred HhhCCCCCceeecccCeEEEEEEeC-C----CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeE------E
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLG-P----NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDF------W 885 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~------~ 885 (1109)
..++|...++||+|+||.||+|... + +..||+|++..... ......| .+....+.+++.+... +
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 4578999999999999999999775 4 68999998743211 1111111 1111122222222111 2
Q ss_pred ecCCceeEEEEeccCCCHHHHHhccCCC-----------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecc
Q 001275 886 LRKDCGIIMYRYMENGSLRDVLHSITPP-----------------PTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDI 948 (1109)
Q Consensus 886 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 948 (1109)
......++|+||+++++|.++++..... .......+..++.|+++||+||| +.+|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcC
Confidence 3456789999999999999998753211 01123446679999999999999 899999999
Q ss_pred CCCCeeeCC-CCcEEEecccCCcccCCCCCCceeeecccCcccccccccccC----------------------CCCccC
Q 001275 949 KPENILLDS-EMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTT----------------------AKSKES 1005 (1109)
Q Consensus 949 k~~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~s 1005 (1109)
||+|||+++ ++.+||+|||+|+.+..... .......+++.|+|||.+... .++.++
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~-~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGIN-YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCccccccccc-cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999986 57899999999986643321 122335789999999955322 234567
Q ss_pred cchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc---cccccchhhhHHh--hhchhHHHHHHHHHHHHhcc
Q 001275 1006 DVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE---INDIVDLSLMEEM--LVSSIRDQVIDVLLVALRCT 1080 (1109)
Q Consensus 1006 DvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~--~~~~~~~~~~~l~~l~~~cl 1080 (1109)
||||+||++|||+++..+++.. ...+.+........ ......+...... ..+.........++++.+|+
T Consensus 361 DVwSlGviL~el~~~~~~~~~~------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSN------LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchH------HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHc
Confidence 9999999999999977654321 11111111000000 0000010000000 00000011223457888999
Q ss_pred CCCCCCCCCHHHHHHHhh
Q 001275 1081 EKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1081 ~~dP~~RPs~~evl~~L~ 1098 (1109)
+.||++|||++|+++|=.
T Consensus 435 ~~dP~kR~ta~e~L~Hpf 452 (566)
T PLN03225 435 RFKGRQRISAKAALAHPY 452 (566)
T ss_pred cCCcccCCCHHHHhCCcC
Confidence 999999999999999844
No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-29 Score=289.95 Aligned_cols=248 Identities=26% Similarity=0.351 Sum_probs=188.4
Q ss_pred CCCCceeecccCeE-EEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEec
Q 001275 821 LNAKHVIGRGAHGI-VYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
|...+++|.|+.|+ ||+|... |+.||||++. .+.....++|++.++.- .|||||++++.-.+....|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll----~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLL----EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHh----hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 34456789998876 6899887 7899999883 23344678999999988 6999999999888888999999999
Q ss_pred cCCCHHHHHhccC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC---C--CcEEEecccCCccc
Q 001275 899 ENGSLRDVLHSIT-PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS---E--MEPHISDFGIAKLL 972 (1109)
Q Consensus 899 ~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~--~~~kl~DfGla~~~ 972 (1109)
.. +|.+++.... ..........+.+..|++.|+++|| +.+||||||||.||||+. + .+++|+|||+++.+
T Consensus 586 ~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 586 AC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred hh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 75 9999998741 1111122445788999999999999 899999999999999975 3 46999999999988
Q ss_pred CCCCCCc-eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhC-CCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 973 DKSPAST-TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITR-KKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 973 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
..+.... ...+..||-+|+|||.+....-+.++||||+||++|+.++| .+||......+..+.. ....+..
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~-------~~~~L~~ 734 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT-------GNYTLVH 734 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc-------Cccceee
Confidence 6554332 23457899999999999998889999999999999999997 8898755433222211 1111111
Q ss_pred ccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1051 IVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1051 ~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
+.. ..++ +..+++.+|++.||..||+|.+|+.|-
T Consensus 735 L~~-----------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 735 LEP-----------LPDC--EAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred ecc-----------CchH--HHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 100 0111 445577799999999999999998763
No 396
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=2.9e-28 Score=284.46 Aligned_cols=268 Identities=18% Similarity=0.229 Sum_probs=179.8
Q ss_pred hhCCCCCceeecccCeEEEEEEe-----------------CCCcEEEEEEeeeccccc-------------ChHHHHHHH
Q 001275 818 TENLNAKHVIGRGAHGIVYKASL-----------------GPNAVFAVKKLAFRGHKR-------------GSLSMKREI 867 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~-------------~~~~~~~E~ 867 (1109)
.++|.+.++||+|+||+||+|.. ..++.||||++....... .......|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999953 245679999985432111 112234577
Q ss_pred HHHhcCCCCce-----eeEeeEEec--------CCceeEEEEeccCCCHHHHHhccCC---------------------C
Q 001275 868 QTIGKIRHRNL-----VRLEDFWLR--------KDCGIIMYRYMENGSLRDVLHSITP---------------------P 913 (1109)
Q Consensus 868 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~ 913 (1109)
.++.+++|.++ ++++++|.. ++..++||||+++|+|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77788876654 677777653 3467999999999999999875321 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCcccccc
Q 001275 914 PTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAP 993 (1109)
Q Consensus 914 ~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aP 993 (1109)
...+|..+..++.|+++|++|+| +.+|+||||||+||+++.++.+||+|||+++........ ......+|+.|+||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~aP 379 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYSPP 379 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCcceeCh
Confidence 23567889999999999999999 889999999999999999999999999999765432211 11223457899999
Q ss_pred cccccCCC----------------------CccCcchhhHHHHHHHHhCCC-CCCCCccccccHHH--HHHHhhcCcccc
Q 001275 994 ENAFTTAK----------------------SKESDVYSYGVVLLELITRKK-ALDPSYKERTDIVG--WVRSVWSDTEEI 1048 (1109)
Q Consensus 994 E~~~~~~~----------------------~~~sDvwSlGvil~elltg~~-p~~~~~~~~~~~~~--~~~~~~~~~~~~ 1048 (1109)
|.+..... ..+.||||+||++|||++|.. |+............ .....|.....
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~- 458 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG- 458 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc-
Confidence 98754321 235799999999999999875 55321100000000 00000100000
Q ss_pred ccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCC---CCCCCHHHHHHHhhh
Q 001275 1049 NDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKP---SNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1049 ~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPs~~evl~~L~~ 1099 (1109)
...+.. ..........+++.+|+..+| .+|+|++|+++|-+-
T Consensus 459 -~~~~~~--------~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f 503 (507)
T PLN03224 459 -QKYDFS--------LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFF 503 (507)
T ss_pred -cCCCcc--------cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence 000000 011112345567778888765 689999999998653
No 397
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=4.5e-28 Score=263.09 Aligned_cols=240 Identities=29% Similarity=0.393 Sum_probs=191.2
Q ss_pred cCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCHHHHHhc
Q 001275 831 AHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSLRDVLHS 909 (1109)
Q Consensus 831 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 909 (1109)
+||.||+|... +++.+|+|++...........+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999876 48999999985443333267899999999999999999999999998999999999999999999876
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCcc
Q 001275 910 ITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIG 989 (1109)
Q Consensus 910 ~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~ 989 (1109)
... +++..+..++.+++++++||| +.+|+|+||+|+||++++++.++++|||.+....... ......++..
T Consensus 81 ~~~---~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~ 151 (244)
T smart00220 81 RGR---LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPE 151 (244)
T ss_pred ccC---CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcC
Confidence 432 789999999999999999999 8899999999999999999999999999998765432 2233568889
Q ss_pred cccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHH
Q 001275 990 YIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQV 1069 (1109)
Q Consensus 990 y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 1069 (1109)
|+|||...+..++.++||||+|+++|++++|..||.... ..... .............. .....
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-~~~~~---~~~~~~~~~~~~~~-------------~~~~~ 214 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-QLLEL---FKKIGKPKPPFPPP-------------EWKIS 214 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-cHHHH---HHHHhccCCCCccc-------------cccCC
Confidence 999999988888999999999999999999999986421 11111 11111100000000 00023
Q ss_pred HHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1070 IDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1070 ~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.++.+++.+|+..+|++||++.|++++
T Consensus 215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 215 PEAKDLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHHHHHccCCchhccCHHHHhhC
Confidence 457778889999999999999999974
No 398
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=5.5e-29 Score=240.17 Aligned_cols=202 Identities=28% Similarity=0.376 Sum_probs=168.4
Q ss_pred CCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEeccC
Q 001275 823 AKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 823 ~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
....||+|++|.|-+.++ .+|+..|+|++...-..+..++..+|+.+..+. .+|.+|.++|.+.+....++.||.|.-
T Consensus 50 ~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~t 129 (282)
T KOG0984|consen 50 GIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMDT 129 (282)
T ss_pred hhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhhh
Confidence 345699999999998865 579999999997776677777888999987776 799999999999999999999999965
Q ss_pred CCHHHHHhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 901 GSLRDVLHSI-TPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 901 gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
||+.+.+.. .....+++...-+||..+.+||.|||+ +..++|||+||+|||++.+|++|++|||.+-.+.+.-..+
T Consensus 130 -Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt 206 (282)
T KOG0984|consen 130 -SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKT 206 (282)
T ss_pred -hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHH
Confidence 888776542 334568888999999999999999996 6789999999999999999999999999998775432211
Q ss_pred eeeecccCcccccccccc----cCCCCccCcchhhHHHHHHHHhCCCCCCCCccc
Q 001275 980 TSISVVGTIGYIAPENAF----TTAKSKESDVYSYGVVLLELITRKKALDPSYKE 1030 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~----~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~ 1030 (1109)
-..|-..|||||.+. ...|+.|+||||+|+++.||.+++.|++....+
T Consensus 207 ---~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tp 258 (282)
T KOG0984|consen 207 ---MDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTP 258 (282)
T ss_pred ---HhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCH
Confidence 135777899999775 347899999999999999999999999755433
No 399
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.9e-29 Score=270.88 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=199.3
Q ss_pred hCCCCCceeecccCeEEEEEEeCCCc-EEEEEEeeecc--cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGPNA-VFAVKKLAFRG--HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~~~-~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.+++....||-|+||.|-.+..+... .+|+|.+++.. .......+..|-++|...+.|.||++|-.|.+....|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45556677999999999999776544 37888775443 2333456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
|-|-||.++..++..+. ++......++..+.+|++||| .++||+|||||+|.+++.+|-+|+.|||+|+.+..+
T Consensus 500 EaClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 99999999999987554 788888889999999999999 999999999999999999999999999999988655
Q ss_pred CCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchh
Q 001275 976 PASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLS 1055 (1109)
Q Consensus 976 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 1055 (1109)
.. .-.++||+.|.|||++.++..+.++|.||+|+++||+++|.+||....+-. ........ ++.+--
T Consensus 574 ~K---TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk-----tYn~ILkG---id~i~~-- 640 (732)
T KOG0614|consen 574 RK---TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK-----TYNLILKG---IDKIEF-- 640 (732)
T ss_pred Cc---eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH-----HHHHHHhh---hhhhhc--
Confidence 33 334799999999999999999999999999999999999999997542211 11111111 000000
Q ss_pred hhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCC-----HHHHHHHhhh
Q 001275 1056 LMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPN-----MRDVVRQLVD 1099 (1109)
Q Consensus 1056 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~evl~~L~~ 1099 (1109)
+..+.. ...+++.+.+..+|.+|.. +.|+-+|-+-
T Consensus 641 ------Pr~I~k---~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf 680 (732)
T KOG0614|consen 641 ------PRRITK---TATDLIKKLCRDNPTERLGYQKGGINDIKKHRWF 680 (732)
T ss_pred ------ccccch---hHHHHHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence 011122 2344666888899999974 7888888764
No 400
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=3.2e-28 Score=268.41 Aligned_cols=204 Identities=25% Similarity=0.355 Sum_probs=171.7
Q ss_pred hCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeeccc--ccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRGH--KRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
.-|...+.||-|+||+|..+ +.++...||.|.+.+... ......++.|-.|+..-..+.||+++..|.+++..|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 44777889999999999999 455678899998854432 223456788999999999999999999999999999999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC--
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD-- 973 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~-- 973 (1109)
||++||++...|.+.+ .+.++.+..++.++..|+++.| +.|+|||||||+|||||.+|++||+|||++.-+.
T Consensus 709 dYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred eccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999987644 4788888889999999999999 9999999999999999999999999999985321
Q ss_pred -------CCCCC-------------------------------ceeeecccCcccccccccccCCCCccCcchhhHHHHH
Q 001275 974 -------KSPAS-------------------------------TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLL 1015 (1109)
Q Consensus 974 -------~~~~~-------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ 1015 (1109)
.++.. ......+||+.|+|||++....|+..+|.||.|||+|
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 11000 0011247999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCc
Q 001275 1016 ELITRKKALDPSY 1028 (1109)
Q Consensus 1016 elltg~~p~~~~~ 1028 (1109)
||+.|+.||-...
T Consensus 863 em~~g~~pf~~~t 875 (1034)
T KOG0608|consen 863 EMLVGQPPFLADT 875 (1034)
T ss_pred HHhhCCCCccCCC
Confidence 9999999996543
No 401
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-27 Score=245.69 Aligned_cols=200 Identities=23% Similarity=0.317 Sum_probs=173.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecc--cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRG--HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv 894 (1109)
++|+..++||+|+|++|..+++. +.+.||+|++++.- ..+....++.|-.+..+- +||.+|.+..++..+...++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 57889999999999999999764 57889999886543 344455677787777776 799999999999999999999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
.||++||+|.-+++..+ .++++.+..+..+|+-||.||| +++|+.||+|.+|||+|..|.+|++|||+++.--.
T Consensus 330 ieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 99999999987776544 4888888899999999999999 99999999999999999999999999999985433
Q ss_pred CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 975 SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 975 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
+. .....++||+.|.|||++.+..|...+|.|++||+++||+.|+.||+-
T Consensus 404 ~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 404 PG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred CC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 32 233457999999999999999999999999999999999999999974
No 402
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=3.1e-28 Score=238.19 Aligned_cols=264 Identities=19% Similarity=0.280 Sum_probs=200.5
Q ss_pred hhCCCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecccccChHHHHHHHHHHhcCC-CCceeeEeeEEecCC--ceeE
Q 001275 818 TENLNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKD--CGII 893 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~~~l 893 (1109)
.++|++.+++|+|.|++||.|. ..+.++++||.++ +...+.+.+|+.++..++ ||||+++++...+.. ...+
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK----PVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK----PVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeec----hHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 4678888999999999999995 5678889999883 334567899999999996 999999999987654 5689
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC-CcEEEecccCCccc
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE-MEPHISDFGIAKLL 972 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfGla~~~ 972 (1109)
|+||+.+.+...... +++...+...+.++++||.|+| +.||+|||+||.||++|.. ...+++|+|+|.++
T Consensus 113 iFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred HhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhc
Confidence 999999987766553 3667778889999999999999 9999999999999999865 56999999999988
Q ss_pred CCCCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc-----c
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT-----E 1046 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-----~ 1046 (1109)
...... ...+.+..|.-||.+..- .|+..-|+|||||++..|+..+.||..+.....+++.+++....++ .
T Consensus 184 Hp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 184 HPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred CCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 655432 235677788999987654 5688999999999999999999999887766666666554332110 0
Q ss_pred ccccccchhhhH-----------HhhhchhHHH-HHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1047 EINDIVDLSLME-----------EMLVSSIRDQ-VIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1047 ~~~~~~d~~~~~-----------~~~~~~~~~~-~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
...-..|+.... .+........ ..+.++++.+.+..|-.+|||++|++.|-
T Consensus 261 KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~Hp 323 (338)
T KOG0668|consen 261 KYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHP 323 (338)
T ss_pred HHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCc
Confidence 001112222211 1111111111 25567777799999999999999998774
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.3e-26 Score=250.64 Aligned_cols=273 Identities=21% Similarity=0.263 Sum_probs=195.1
Q ss_pred hCCCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecccccChHHHHHHHHHHhcCC-----C---CceeeEeeEEec--
Q 001275 819 ENLNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR-----H---RNLVRLEDFWLR-- 887 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~niv~l~~~~~~-- 887 (1109)
.+|.+.++||-|.|++||.|. ....+.||+|+.+ +.+........||+++++++ | .+||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvK--SAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVK--SAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEe--hhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 578889999999999999994 4567899999874 33444556788999999983 2 479999999875
Q ss_pred --CCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC-------
Q 001275 888 --KDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE------- 958 (1109)
Q Consensus 888 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~------- 958 (1109)
+.+.|+|+|++ |.+|..++..... ..++...+.+|++||+.||.|||.+ .+|+|.||||+|||+...
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl~~~e~~~~~~ 231 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLLCSTEIDPAKD 231 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeeeeccccchhhh
Confidence 45789999999 5589998877543 3488999999999999999999974 599999999999998410
Q ss_pred --------------------------------------------------------------------------------
Q 001275 959 -------------------------------------------------------------------------------- 958 (1109)
Q Consensus 959 -------------------------------------------------------------------------------- 958 (1109)
T Consensus 232 ~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~ 311 (590)
T KOG1290|consen 232 AREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRING 311 (590)
T ss_pred hhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCc
Confidence
Q ss_pred -------------------------------------------------------------------------------C
Q 001275 959 -------------------------------------------------------------------------------M 959 (1109)
Q Consensus 959 -------------------------------------------------------------------------------~ 959 (1109)
-
T Consensus 312 ~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di 391 (590)
T KOG1290|consen 312 NESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDI 391 (590)
T ss_pred cccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccce
Confidence 0
Q ss_pred cEEEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccc----cccHH
Q 001275 960 EPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKE----RTDIV 1035 (1109)
Q Consensus 960 ~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~----~~~~~ 1035 (1109)
++||+|||-|+..... .+.-..|..|+|||++.+..|++.+||||++|++||++||...|+|..++ +++..
T Consensus 392 ~vKIaDlGNACW~~kh-----FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHi 466 (590)
T KOG1290|consen 392 RVKIADLGNACWVHKH-----FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHI 466 (590)
T ss_pred eEEEeeccchhhhhhh-----hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHH
Confidence 1233333333322111 01124678899999999999999999999999999999999999875332 22222
Q ss_pred HHHHHh--------hcCccccccccch-----------------hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCH
Q 001275 1036 GWVRSV--------WSDTEEINDIVDL-----------------SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNM 1090 (1109)
Q Consensus 1036 ~~~~~~--------~~~~~~~~~~~d~-----------------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~ 1090 (1109)
..+... .......+++++. -+.+++ ....+++.++.+++.-|++.+|++||||
T Consensus 467 A~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY--~~s~e~A~~fsdFL~PmLef~PeKR~tA 544 (590)
T KOG1290|consen 467 ALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKY--EWSEEDAQQFSDFLSPMLEFDPEKRPTA 544 (590)
T ss_pred HHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHh--CCCHHHHHHHHHHHHHHHhcCccccccH
Confidence 111111 1111111111111 111111 1234667888889999999999999999
Q ss_pred HHHHHHhhhCCCCC
Q 001275 1091 RDVVRQLVDASVPM 1104 (1109)
Q Consensus 1091 ~evl~~L~~~~~~~ 1104 (1109)
.+.++|-+-..++.
T Consensus 545 ~~cl~hPwLn~~~~ 558 (590)
T KOG1290|consen 545 AQCLKHPWLNPVAG 558 (590)
T ss_pred HHHhcCccccCCCC
Confidence 99999877654443
No 404
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=2.8e-27 Score=259.72 Aligned_cols=198 Identities=26% Similarity=0.328 Sum_probs=170.0
Q ss_pred hhCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeeccc-------ccChHHHHHHHHHHhcCC---CCceeeEeeEEe
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGH-------KRGSLSMKREIQTIGKIR---HRNLVRLEDFWL 886 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~ 886 (1109)
...|...+.+|+|+||.|+.|.++. ...|+||.+.+... ......+-.|+++|..++ |+||++++++|+
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE 639 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE 639 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence 3568889999999999999997754 56788888754431 111224567999999997 999999999999
Q ss_pred cCCceeEEEEec-cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEec
Q 001275 887 RKDCGIIMYRYM-ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISD 965 (1109)
Q Consensus 887 ~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 965 (1109)
+++.+|++||-. ++-+|++++.... .+++.++.-|+.||+.|+++|| +.+|||||||-+||.++.+|.+|++|
T Consensus 640 ddd~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 640 DDDYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred cCCeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEee
Confidence 999999999986 4559999997643 4999999999999999999999 99999999999999999999999999
Q ss_pred ccCCcccCCCCCCceeeecccCcccccccccccCCC-CccCcchhhHHHHHHHHhCCCCCC
Q 001275 966 FGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAK-SKESDVYSYGVVLLELITRKKALD 1025 (1109)
Q Consensus 966 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~sDvwSlGvil~elltg~~p~~ 1025 (1109)
||.|....++.. ..++||..|.|||++.+.+| +..-|||++|+++|.++....||+
T Consensus 714 fgsaa~~ksgpf----d~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSGPF----DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCCCc----ceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999987755433 34689999999999999988 788999999999999999988875
No 405
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=3.2e-28 Score=243.47 Aligned_cols=269 Identities=22% Similarity=0.296 Sum_probs=190.5
Q ss_pred CCCCceeecccCeEEEEEEe-CCCcEEEEEEeeec-ccccChHHHHHHHHHHhcCCCCceeeEeeEEecC-----CceeE
Q 001275 821 LNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFR-GHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK-----DCGII 893 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~~~l 893 (1109)
.+..+.||-|+||.||.+++ ++|+.||.|++..- ..-...+++.+|+.++...+|.|+...++...-. .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34567799999999999965 57999999988432 2334567888999999999999999988765432 25688
Q ss_pred EEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 894 MYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 894 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
++|.|.. +|..++-. +..++.+.+.-+.+||++||+||| +.+|.||||||.|.+++.+...||+|||+|+...
T Consensus 135 ~TELmQS-DLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 135 LTELMQS-DLHKIIVS---PQALTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHHHh-hhhheecc---CCCCCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccc
Confidence 8888864 77776644 445888888899999999999999 9999999999999999999999999999999764
Q ss_pred CCCCCceeeecccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCc-------
Q 001275 974 KSPASTTSISVVGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDT------- 1045 (1109)
Q Consensus 974 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------- 1045 (1109)
.. ....++..+.|..|+|||.+.+. .|+.+.||||.|||+.|++.++..|.....- +..+.+-......
T Consensus 208 ~d-~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi--qQL~lItdLLGTPs~EaMr~ 284 (449)
T KOG0664|consen 208 QR-DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI--EQLQMIIDLLGTPSQEAMKY 284 (449)
T ss_pred hh-hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH--HHHHHHHHHhCCCcHHHHHH
Confidence 33 23334456788999999998875 5799999999999999999998877543111 1111111111100
Q ss_pred -------cccccc-cchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1046 -------EEINDI-VDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1046 -------~~~~~~-~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
..++.- -.+....-.........-.+.+.+...++..||.+|.+..+++.++-.
T Consensus 285 ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~ 346 (449)
T KOG0664|consen 285 ACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL 346 (449)
T ss_pred HhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence 000000 000000000000011122334556678999999999999999988644
No 406
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.94 E-value=1.4e-25 Score=237.52 Aligned_cols=212 Identities=33% Similarity=0.525 Sum_probs=182.4
Q ss_pred eecccCeEEEEEEeCC-CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCHHH
Q 001275 827 IGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSLRD 905 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 905 (1109)
||+|++|.||++.... ++.+++|++...........+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999998764 899999998544333235679999999999999999999999999899999999999999999
Q ss_pred HHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-CCcEEEecccCCcccCCCCCCceeeec
Q 001275 906 VLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-EMEPHISDFGIAKLLDKSPASTTSISV 984 (1109)
Q Consensus 906 ~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfGla~~~~~~~~~~~~~~~ 984 (1109)
++.... ..+++..+..++.+++++++||| +.+++|+||+|.||+++. ++.++|+|||.+........ .....
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~ 153 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTI 153 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcc
Confidence 987642 34889999999999999999999 889999999999999999 89999999999986644321 12234
Q ss_pred ccCcccccccccccC-CCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhc
Q 001275 985 VGTIGYIAPENAFTT-AKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVS 1063 (1109)
Q Consensus 985 ~gt~~y~aPE~~~~~-~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 1063 (1109)
.+...|++||..... .++.++|+|++|++++++
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------------------- 187 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------------------- 187 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------------------
Confidence 678899999988877 788999999999999999
Q ss_pred hhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1064 SIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1064 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
..+.+++.+|++.+|++||+++++++++
T Consensus 188 ------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3356678899999999999999998764
No 407
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=238.65 Aligned_cols=262 Identities=22% Similarity=0.278 Sum_probs=191.6
Q ss_pred hCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeec-ccccChHHHHHHHHHHhcCCCCceeeEeeEEecC------Cc
Q 001275 819 ENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFR-GHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRK------DC 890 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~ 890 (1109)
.+|...+.+|.|.- .|..| +.-.++.||+|+.... ......++..+|...+..+.|+||++++.++.-. .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46667788999988 56666 3346889999987433 2344566788999999999999999999998643 35
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.|+|||||.. +|...++. .++=+....+..|++.|+.||| +.+|+||||||+||++..+..+||.|||+|+
T Consensus 96 ~y~v~e~m~~-nl~~vi~~-----elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 96 VYLVMELMDA-NLCQVILM-----ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred HHHHHHhhhh-HHHHHHHH-----hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhc
Confidence 6999999964 88888773 2566778899999999999999 9999999999999999999999999999998
Q ss_pred ccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccc
Q 001275 971 LLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIND 1050 (1109)
Q Consensus 971 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1050 (1109)
.-+. ....+.++.|..|+|||++.+..+.+.+||||.||++.||++|+.-|.+. ..+.+|.+..-.-+..-..
T Consensus 167 ~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~----d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 167 TEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK----DHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred ccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc----hHHHHHHHHHHHhcCCCHH
Confidence 5432 23455678999999999999999999999999999999999999877521 2222232221111100000
Q ss_pred ccc---------------------hhhhHHh----hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1051 IVD---------------------LSLMEEM----LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1051 ~~d---------------------~~~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
+.+ .+..+.. ..+..+......-+++.+|+-.+|++|-+++++++|-
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HP 311 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHP 311 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCC
Confidence 000 0000000 0001111222345577799999999999999999874
No 408
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=3.9e-26 Score=244.78 Aligned_cols=270 Identities=24% Similarity=0.313 Sum_probs=200.2
Q ss_pred HHhhCCCCCceeecccCeEEEEEEeC----CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCc
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASLG----PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 890 (1109)
...+.|...++||+|.|++||+|... ..+.||+|.+.... ...++..|++++..+ .+.||+++.+++...+.
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts---~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS---SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc---CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 34467889999999999999999543 47889999885433 345689999999999 59999999999999999
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-CCcEEEecccCC
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-EMEPHISDFGIA 969 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfGla 969 (1109)
..+|+||++.....++... ++..++..++..+..||+++| +.|||||||||+|++.+. -+.-.|.|||+|
T Consensus 110 v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred eEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhH
Confidence 9999999999999998876 667888999999999999999 999999999999999975 467899999998
Q ss_pred cccCCCC------------------------------------------CCceeeecccCcccccccccccCC-CCccCc
Q 001275 970 KLLDKSP------------------------------------------ASTTSISVVGTIGYIAPENAFTTA-KSKESD 1006 (1109)
Q Consensus 970 ~~~~~~~------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~-~~~~sD 1006 (1109)
...+... .........||+||+|||++...+ .+.++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 7321100 000112347999999999887654 589999
Q ss_pred chhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC--------ccc--ccc----ccchhhhHHh-------h----
Q 001275 1007 VYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD--------TEE--IND----IVDLSLMEEM-------L---- 1061 (1109)
Q Consensus 1007 vwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~--~~~----~~d~~~~~~~-------~---- 1061 (1109)
|||.|||++-++++++||.....+...+.+.+-..... .+. +.+ ...++....+ .
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 99999999999999999977665555444443221110 000 000 0000000000 0
Q ss_pred -----hchhHH-HHHHHHHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1062 -----VSSIRD-QVIDVLLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1062 -----~~~~~~-~~~~l~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.....+ .....+++..+|++.||.+|.+++|+++|-
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHp 382 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHP 382 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCc
Confidence 000011 122567788899999999999999999875
No 409
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=1.8e-27 Score=250.80 Aligned_cols=314 Identities=24% Similarity=0.259 Sum_probs=214.1
Q ss_pred eEEecCCCCcEEEEEecccC---CccccCCcccCCCCccEeecCCCcccccCCCCCCCCCCCcEeeccCccccCCCCccc
Q 001275 63 GIECDDDAHNVVSFNLSSYG---VSGQLGPEIGHLSKLQTIDLSSNNFSGNIPPKLGNCSALEYLDLSTNGFTGDIPDNF 139 (1109)
Q Consensus 63 gv~C~~~~~~v~~l~l~~~~---l~~~~~~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l 139 (1109)
+++|++..+. .++.++.+ +...+|++ -+.++|..|+|+...|.+|+.+++|++||||+|+|+.+-|++|
T Consensus 40 pC~Cs~~~g~--~VdCr~~GL~eVP~~LP~~------tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF 111 (498)
T KOG4237|consen 40 PCTCSDVEGG--IVDCRGKGLTEVPANLPPE------TVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAF 111 (498)
T ss_pred CcccCCCCCc--eEEccCCCcccCcccCCCc------ceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhh
Confidence 4567654432 22334433 34445543 4678888999998778889999999999999999999899999
Q ss_pred cccCccceecccc-ccccccCCcccccccccceecccccccccccccccCCCcccceeecccccCCCCcccccccccCcc
Q 001275 140 ENLQNLQYLNLYG-NLLDGEIPEPLFRILGLQYVFLNNNSLSGSIPRNVGDLKEVEALWLFSNRLSGTIPESIGNCYRLQ 218 (1109)
Q Consensus 140 ~~L~~L~~L~L~~-n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 218 (1109)
.+|++|.+|-+.+ |+|+..--..|.+|..|+.|.+.-|++.-...+.|.++++|..|.+.+|.+..+--.+|..+.+++
T Consensus 112 ~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~ 191 (498)
T KOG4237|consen 112 KGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIK 191 (498)
T ss_pred hhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccc
Confidence 9999998888877 888843335667788888888888888877778888888888888888888744444788888888
Q ss_pred EEEeccccccCcCchhcccccccccccccCcccCCcccccccCCCCcchhccccccccCCCCcccccc-cCCcEEEeecC
Q 001275 219 ELYLNENKLMGFLPESLSNLENLVYLDVGDNNLEGRINFGSEKCKNLTFLDLSYNRFSGGISPNLGNC-SSLTHLDIVGS 297 (1109)
Q Consensus 219 ~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~n 297 (1109)
.+.+..|.+. ...+++.+..- +.. .+..+++.+-..-..+.++++..+-+..|... .++..=..+.+
T Consensus 192 tlhlA~np~i-----cdCnL~wla~~-~a~------~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d 259 (498)
T KOG4237|consen 192 TLHLAQNPFI-----CDCNLPWLADD-LAM------NPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSED 259 (498)
T ss_pred hHhhhcCccc-----cccccchhhhH-Hhh------chhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhcccc
Confidence 8888887742 12233322221 111 12234444444455555566554444444321 12211111222
Q ss_pred CCCCcCC-ccccccccccEEEcCCCCCCCCCCCccccccccceeeccCcccCCCCCccccCCCCccEEEccCccccccCc
Q 001275 298 KLTGSIP-SSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEGEIPDELGQLSNLQDLELFDNRLTGEFP 376 (1109)
Q Consensus 298 ~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 376 (1109)
...+.-| ..|..+++|+.|+|++|+++++-+.+|.++..+++|+|..|+|...-...|.++..|+.|+|.+|+|+..-|
T Consensus 260 ~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~ 339 (498)
T KOG4237|consen 260 FPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAP 339 (498)
T ss_pred CcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEec
Confidence 2222333 467888888888888888887777888888888888888888876556677778888888888888887777
Q ss_pred hHHHhhcccceeeccCCccC
Q 001275 377 VSIWRIASLEYLLVYNNNLL 396 (1109)
Q Consensus 377 ~~~~~l~~L~~L~l~~N~l~ 396 (1109)
.+|..+.+|.+|.|-.|.+.
T Consensus 340 ~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 340 GAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred ccccccceeeeeehccCccc
Confidence 77777777777777777664
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=6.6e-26 Score=227.53 Aligned_cols=251 Identities=16% Similarity=0.250 Sum_probs=184.3
Q ss_pred hhCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeE-EecCCceeEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDF-WLRKDCGIIM 894 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~-~~~~~~~~lv 894 (1109)
.+.|.+.+.+|+|.||.+-.++++ ..+.+|+|-+.. .....++|.+|+..--.+ .|.||+.-+++ |...+.++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~--p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR--PQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc--chhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 356888899999999999999775 467788887633 345578899999887777 58999987765 6667788899
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeee-CC-CCcEEEecccCCccc
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILL-DS-EMEPHISDFGIAKLL 972 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll-~~-~~~~kl~DfGla~~~ 972 (1109)
+||++.|+|.+-+...+ +.+....+++.|++.|++||| ++++||||||.+|||+ +. ..++|++|||..+..
T Consensus 101 qE~aP~gdL~snv~~~G----igE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG----IGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eccCccchhhhhcCccc----ccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 99999999998776533 778888999999999999999 9999999999999999 33 357999999998755
Q ss_pred CCCCCCceeeecccCccccccccccc---CC--CCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccc
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFT---TA--KSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~--~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 1047 (1109)
+.. ......+..|.|||.... +. ..+.+|||.||+++|.++||+.||......+.....|..........
T Consensus 174 g~t-----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~ 248 (378)
T KOG1345|consen 174 GTT-----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA 248 (378)
T ss_pred Cce-----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc
Confidence 322 122345667999995543 22 36789999999999999999999986555555555555443322211
Q ss_pred cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001275 1048 INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVR 1095 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 1095 (1109)
..+ . .....++..++-.+-+..+|++|=...++.+
T Consensus 249 ~P~-----~--------F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 249 LPK-----K--------FNPFSEKALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred Cch-----h--------hcccCHHHHHHHHHhcCCcccccchhHHHHH
Confidence 111 1 1111223444555778889999844444333
No 411
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=4.3e-26 Score=247.10 Aligned_cols=270 Identities=19% Similarity=0.194 Sum_probs=204.3
Q ss_pred HHhhCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCC------CCceeeEeeEEecC
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR------HRNLVRLEDFWLRK 888 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~~ 888 (1109)
....+|.+....|+|-|++|.+|.. ..|..||||+|... +.-.+.=.+|++++++++ --|+++++..|...
T Consensus 429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN--E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk 506 (752)
T KOG0670|consen 429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN--EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK 506 (752)
T ss_pred hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc--hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence 3456888889999999999999965 45789999998533 222334468999999995 35899999999999
Q ss_pred CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-cEEEeccc
Q 001275 889 DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-EPHISDFG 967 (1109)
Q Consensus 889 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfG 967 (1109)
.+.|+|+|-+. -+|.+.++.++..-.+....+..++.|+.-||..|. ..+|+|.||||+||||++.. ..||||||
T Consensus 507 nHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfG 582 (752)
T KOG0670|consen 507 NHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFG 582 (752)
T ss_pred ceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCc
Confidence 99999999885 499999999888777899999999999999999999 88999999999999999875 47999999
Q ss_pred CCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhh-----
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVW----- 1042 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~----- 1042 (1109)
.|........ +.+..+.-|.|||++.+.+|+...|+||.||++||+.||+..|.+.... ++..+....-
T Consensus 583 SA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN--~MLrl~me~KGk~p~ 656 (752)
T KOG0670|consen 583 SASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN--QMLRLFMELKGKFPN 656 (752)
T ss_pred cccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH--HHHHHHHHhcCCCcH
Confidence 9987654432 2345566799999999999999999999999999999999988543221 1111111110
Q ss_pred ---cCccccccccchhh---------------------------hHHh------hhchhHHHHHHHHHHHHhccCCCCCC
Q 001275 1043 ---SDTEEINDIVDLSL---------------------------MEEM------LVSSIRDQVIDVLLVALRCTEKKPSN 1086 (1109)
Q Consensus 1043 ---~~~~~~~~~~d~~~---------------------------~~~~------~~~~~~~~~~~l~~l~~~cl~~dP~~ 1086 (1109)
......++.+|..+ .... .+......+..+..++..|+..||++
T Consensus 657 KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~K 736 (752)
T KOG0670|consen 657 KMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEK 736 (752)
T ss_pred HHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhh
Confidence 00111111111111 0000 11223344567788888999999999
Q ss_pred CCCHHHHHHHh
Q 001275 1087 RPNMRDVVRQL 1097 (1109)
Q Consensus 1087 RPs~~evl~~L 1097 (1109)
|.+..++++|-
T Consensus 737 Rit~nqAL~Hp 747 (752)
T KOG0670|consen 737 RITVNQALKHP 747 (752)
T ss_pred cCCHHHHhcCC
Confidence 99999999874
No 412
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=1.7e-26 Score=257.89 Aligned_cols=252 Identities=24% Similarity=0.310 Sum_probs=195.2
Q ss_pred hCCCCCceeecccCeEEEEEEe-CCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++|...+.+|+|.||.||||+. ..++..|+|+++... .....-+++|+-+++..+|+|||.++|.|...+..++.|||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep-~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP-GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccC-CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 5688889999999999999965 568889999885443 33455678899999999999999999999999999999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPA 977 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 977 (1109)
+.+|+|.+..+..+ .+++.++..+.++..+|++||| +.+-+|||||-.||++++.|.+|++|||.+..+...
T Consensus 94 cgggslQdiy~~Tg---plselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitat-- 165 (829)
T KOG0576|consen 94 CGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT-- 165 (829)
T ss_pred cCCCcccceeeecc---cchhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhh--
Confidence 99999999887755 4888888999999999999999 999999999999999999999999999998766432
Q ss_pred CceeeecccCccccccccc---ccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccch
Q 001275 978 STTSISVVGTIGYIAPENA---FTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDL 1054 (1109)
Q Consensus 978 ~~~~~~~~gt~~y~aPE~~---~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 1054 (1109)
..+...+.||+.|||||+. ..+.|..++|||+.|+...|+---+.|...-... . .-... -. .-+++
T Consensus 166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm-r--~l~Lm--Tk------S~~qp 234 (829)
T KOG0576|consen 166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM-R--ALFLM--TK------SGFQP 234 (829)
T ss_pred hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH-H--HHHHh--hc------cCCCC
Confidence 2333457899999999965 4677899999999999999998777765322111 0 00000 00 00111
Q ss_pred -hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1055 -SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1055 -~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.+..+ ......+.+++..|+..+|++||+++.+++|
T Consensus 235 p~lkDk------~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 235 PTLKDK------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred CcccCC------ccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 11111 1122334456668999999999999887764
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-26 Score=244.26 Aligned_cols=397 Identities=22% Similarity=0.258 Sum_probs=287.5
Q ss_pred cCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCCccccccccceeeccC-cccCCCCCccccCCCCccEEE
Q 001275 287 SSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYA-NQLEGEIPDELGQLSNLQDLE 365 (1109)
Q Consensus 287 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~-N~l~~~~p~~l~~l~~L~~L~ 365 (1109)
+.-+.++|..|+|+...|.+|+.+++|+.||||+|+|+.+-|++|.++++|..|-+.+ |+|+......|+.|..|+.|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 3567888999999988888999999999999999999988899999998888887766 889866667888899999999
Q ss_pred ccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcccCCccccCCCCCceEEecCCcccc
Q 001275 366 LFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQSLGINSSLMQLDFINNSFTG 445 (1109)
Q Consensus 366 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~ 445 (1109)
+.-|++.....+.+..+++|..|.+.+|.+...--..|..+..++.+.+..|.+-. .++++-+.. |+..|
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic-----dCnL~wla~-~~a~~---- 216 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC-----DCNLPWLAD-DLAMN---- 216 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc-----ccccchhhh-HHhhc----
Confidence 99999988888888899999999999998875444478888888888888888532 112222211 11222
Q ss_pred cCCCCcccCccceEEECCCcccccCCCcccCCC-CccchhhccCcccCCCCCC--CCCCCCCceEEeecCccCCCCCCcc
Q 001275 446 EIPPNLCFGKQLRVLNMGQNQFHGPIPSLLGSC-PTLWRVILKQNQLTGALPE--FSKNPVLSHLDVSRNNISGAIPSSI 522 (1109)
Q Consensus 446 ~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~l~l~~N~l~~~~~~--~~~~~~L~~L~Ls~N~i~~~~p~~~ 522 (1109)
|..+.......-..+.++++...-+..|... ..+..-..+.+...+.-|. |+++++|+.|+|++|+|+++-+.+|
T Consensus 217 --~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aF 294 (498)
T KOG4237|consen 217 --PIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAF 294 (498)
T ss_pred --hhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhh
Confidence 2223333334444455555553333333322 2333333444445555665 9999999999999999999999999
Q ss_pred cccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEecCccccC--------------
Q 001275 523 GNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNG-------------- 588 (1109)
Q Consensus 523 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~-------------- 588 (1109)
.++..+++|.|..|+|...--..|.++..|++|+|.+|+|+-.-|..|..+..|..|.|-.|.+.=
T Consensus 295 e~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~ 374 (498)
T KOG4237|consen 295 EGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKK 374 (498)
T ss_pred cchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhC
Confidence 999999999999999987667789999999999999999998899999999999999999887750
Q ss_pred ---CCCcccccccccceeccccccccC---CCcchhh---------hhhhhhhh-hcccCcCCCCCCCCchhhhhhhhhh
Q 001275 589 ---SIPSSLRSWKSLSILKLSENHFTG---GIPTFIS---------ELEKLLEL-QLGGNQLGGEIPPSIGALQDLSYAL 652 (1109)
Q Consensus 589 ---~~p~~~~~l~~L~~L~L~~N~l~~---~~p~~~~---------~l~~L~~L-~l~~N~l~g~ip~~~~~l~~l~~~L 652 (1109)
..|.. ++-..++.+.++.+.+.. ..|+..+ ..+-+... .-|++.+. .+|..|..=. .+|
T Consensus 375 ~~~~~~~C-q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~iP~d~---tel 449 (498)
T KOG4237|consen 375 SVVGNPRC-QSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGIPVDV---TEL 449 (498)
T ss_pred CCCCCCCC-CCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCCCchh---HHH
Confidence 11110 112345566666655432 2222221 12333333 34444444 7777664322 468
Q ss_pred cccccccccccCcchhhcccCCeEEccCCcccccCCC-CCccccceEEeeecc
Q 001275 653 NLSKNGLTGRIPSDLEKLSKLEQLDISSNNLTGTLSP-LSNIHSLVEVNVSYN 704 (1109)
Q Consensus 653 ~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~~~-l~~~~~l~~l~~~~n 704 (1109)
+|.+|.++ .+|.+ .+..| .+|||+|+++..-.. +++++.|.+|.+|+|
T Consensus 450 yl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 450 YLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 99999999 89988 77888 999999999843223 899999999999987
No 414
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=2.6e-24 Score=230.70 Aligned_cols=200 Identities=31% Similarity=0.410 Sum_probs=171.3
Q ss_pred CCCCceeecccCeEEEEEEeCC-CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEecc
Q 001275 821 LNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
|...+.||+|++|+||+|...+ ++.+|+|.+...........+.+|++.+++++|+|++++++++...+..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567889999999999998765 889999998544332246688999999999999999999999999899999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+++|.+++...... +++..+..++.++++++.+|| +.+++|+|++|+||+++.++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~-~ 154 (225)
T smart00221 81 GGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA-A 154 (225)
T ss_pred CCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc-c
Confidence 99999999864321 789999999999999999999 88999999999999999999999999999987654321 1
Q ss_pred eeeecccCccccccccc-ccCCCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 980 TSISVVGTIGYIAPENA-FTTAKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~-~~~~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 155 ~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22234678899999988 667778899999999999999999999954
No 415
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=7e-24 Score=276.29 Aligned_cols=339 Identities=21% Similarity=0.274 Sum_probs=221.1
Q ss_pred CcccccccCCcEEEeecCCC------CCcCCcccccc-ccccEEEcCCCCCCCCCCCccccccccceeeccCcccCCCCC
Q 001275 280 SPNLGNCSSLTHLDIVGSKL------TGSIPSSFGLL-ARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEGEIP 352 (1109)
Q Consensus 280 ~~~~~~l~~L~~L~L~~n~l------~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 352 (1109)
+.+|.++.+|+.|.+..+.. ...+|..|..+ .+|+.|++.+|.++ .+|..| ...+|+.|++++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 34566777777777765532 23355555554 35777777777776 566666 4577777777777776 566
Q ss_pred ccccCCCCccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcccCCccccCCCC
Q 001275 353 DELGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQSLGINSS 432 (1109)
Q Consensus 353 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~ 432 (1109)
..+..+++|+.|+|++|...+.+|. +..+++|+.|++++|.....+|..+..+++|+.|++++|...+.+|..+ .+++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 6677777778888777654445553 6667777777777777666777777777778888877765555666655 5677
Q ss_pred CceEEecCCcccccCCCCcccCccceEEECCCcccccCCCcccCCCCccchhhccCcccC-------CCCCC-CCCCCCC
Q 001275 433 LMQLDFINNSFTGEIPPNLCFGKQLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQNQLT-------GALPE-FSKNPVL 504 (1109)
Q Consensus 433 L~~L~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~-------~~~~~-~~~~~~L 504 (1109)
|++|++++|.....+|.. ..+|+.|++++|.+. .+|..+ .+++|..|.+.++... ...+. +...++|
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL 780 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL 780 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccc
Confidence 777777777665555542 356777777777775 455443 4566666666553221 11111 2234567
Q ss_pred ceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEecCc
Q 001275 505 SHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFN 584 (1109)
Q Consensus 505 ~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 584 (1109)
+.|++++|...+.+|.+++++++|+.|++++|...+.+|..+ ++++|+.|++++|..-..+|.. ..+|+.|+|++|
T Consensus 781 ~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n 856 (1153)
T PLN03210 781 TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRT 856 (1153)
T ss_pred hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCC
Confidence 777777777666777777777777777777765444566555 5777777777776544445543 256777777777
Q ss_pred cccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCc
Q 001275 585 LLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQ 633 (1109)
Q Consensus 585 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 633 (1109)
.|+ .+|.++..+++|+.|++++|.--..+|..+..+++|+.|++++|.
T Consensus 857 ~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 857 GIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 776 567777777777777777633222566666666777777776664
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=2.4e-23 Score=271.33 Aligned_cols=338 Identities=24% Similarity=0.280 Sum_probs=267.2
Q ss_pred cccccCCCCcchhccccccc------cCCCCccccccc-CCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCC
Q 001275 256 NFGSEKCKNLTFLDLSYNRF------SGGISPNLGNCS-SLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIP 328 (1109)
Q Consensus 256 ~~~~~~l~~L~~L~Ls~N~l------~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 328 (1109)
+..|.++++|+.|.+..+.. ...+|..|..++ +|+.|++.++.++ .+|..| .+.+|+.|++++|++. .++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccc
Confidence 34567778888887765532 234566666654 6999999998887 567766 4688999999999987 677
Q ss_pred CccccccccceeeccCcccCCCCCccccCCCCccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCC
Q 001275 329 PELGKCKYLTVLHLYANQLEGEIPDELGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQ 408 (1109)
Q Consensus 329 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 408 (1109)
..+..+++|+.|+|+++...+.+|. ++.+++|++|+|++|.....+|..+..+++|+.|++++|...+.+|..+ ++++
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~s 705 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKS 705 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCC
Confidence 8888899999999998765556774 7888999999999987666889999999999999999987666777765 7889
Q ss_pred CCeEEccCCcCcccCCccccCCCCCceEEecCCcccccCCCCcccCccceEEECCCccc-------ccCCCcccCCCCcc
Q 001275 409 LKNISLYNNQFSGVIPQSLGINSSLMQLDFINNSFTGEIPPNLCFGKQLRVLNMGQNQF-------HGPIPSLLGSCPTL 481 (1109)
Q Consensus 409 L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l-------~~~~p~~~~~l~~L 481 (1109)
|+.|++++|...+.+|.. ..+|++|++++|.++ .+|..+ .+.+|+.|++.++.. ....|......++|
T Consensus 706 L~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL 780 (1153)
T PLN03210 706 LYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSL 780 (1153)
T ss_pred CCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhccccc
Confidence 999999998766666653 467899999999987 566654 567888888877432 22223333445789
Q ss_pred chhhccCcccCCCCCC-CCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccc
Q 001275 482 WRVILKQNQLTGALPE-FSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLN 560 (1109)
Q Consensus 482 ~~l~l~~N~l~~~~~~-~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 560 (1109)
+.|++++|...+.+|. ++.+++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. ..+|+.|+|++|
T Consensus 781 ~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n 856 (1153)
T PLN03210 781 TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRT 856 (1153)
T ss_pred hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCC
Confidence 9999999987777776 8999999999999986656888877 7899999999998665555543 367999999999
Q ss_pred cccccCCccccCCCCccEEEecC-ccccCCCCcccccccccceecccccc
Q 001275 561 HVEGSLPSQLSKCKNLEVFDVSF-NLLNGSIPSSLRSWKSLSILKLSENH 609 (1109)
Q Consensus 561 ~l~~~~p~~l~~l~~L~~L~ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~ 609 (1109)
.|+ .+|..+..+++|+.|++++ |++. .+|..+..+++|+.+++++|.
T Consensus 857 ~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 857 GIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 998 7899999999999999998 6676 688889999999999998874
No 417
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.90 E-value=1.6e-23 Score=252.31 Aligned_cols=58 Identities=33% Similarity=0.329 Sum_probs=27.7
Q ss_pred hcccccccccccCcchhhcccCCeEEccCCcccccCCC-CCccccceEEeeeccccccccchhh
Q 001275 652 LNLSKNGLTGRIPSDLEKLSKLEQLDISSNNLTGTLSP-LSNIHSLVEVNVSYNLFTGPVPETL 714 (1109)
Q Consensus 652 L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~~~-l~~~~~l~~l~~~~n~l~g~~p~~~ 714 (1109)
|++++|+|+ .+|... .+|+.|+|++|+|+ .+|. +.+++.|+.+++++|+|+|.+|..+
T Consensus 407 LdLS~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 407 LMVSGNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred EEccCCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 445555544 244322 23444555555554 3343 4445555555555555555555444
No 418
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.89 E-value=3.4e-23 Score=249.60 Aligned_cols=126 Identities=26% Similarity=0.317 Sum_probs=77.2
Q ss_pred CCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEec
Q 001275 503 VLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVS 582 (1109)
Q Consensus 503 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls 582 (1109)
+|++|+|++|+|+ .+|... .+|+.|++++|+|++ +|.. ..+|+.|++++|+|+ .+|... ++|+.|+++
T Consensus 343 ~Lq~LdLS~N~Ls-~LP~lp---~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS 410 (788)
T PRK15387 343 GLQELSVSDNQLA-SLPTLP---SELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLPVLP---SELKELMVS 410 (788)
T ss_pred ccceEecCCCccC-CCCCCC---cccceehhhcccccc-Cccc---ccccceEEecCCccc-CCCCcc---cCCCEEEcc
Confidence 4555666666665 234322 345556666666663 4432 235666666666666 344332 467777777
Q ss_pred CccccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCCchhh
Q 001275 583 FNLLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPSIGAL 645 (1109)
Q Consensus 583 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l 645 (1109)
+|+|+ .+|... .+|+.|++++|+++ .+|..+..+++|+.|+|++|+|+|.+|..+..+
T Consensus 411 ~N~Ls-sIP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 411 GNRLT-SLPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred CCcCC-CCCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 77776 456432 35667777777777 677777777777777888888777666655443
No 419
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=9.1e-24 Score=267.58 Aligned_cols=199 Identities=17% Similarity=0.214 Sum_probs=139.3
Q ss_pred cCCC-CceeeEeeEE-------ecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 001275 872 KIRH-RNLVRLEDFW-------LRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPI 943 (1109)
Q Consensus 872 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 943 (1109)
..+| +||+++++++ ...+..+.++||+ +++|.++++.. ...+++.+++.++.||++||+||| +++|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH---~~gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAH---SQGI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 3445 5777788876 2234567888887 55999999753 234899999999999999999999 8999
Q ss_pred EEeccCCCCeeeCC-------------------CCcEEEecccCCcccCCCCC--------------CceeeecccCccc
Q 001275 944 VHRDIKPENILLDS-------------------EMEPHISDFGIAKLLDKSPA--------------STTSISVVGTIGY 990 (1109)
Q Consensus 944 vH~Dlk~~NIll~~-------------------~~~~kl~DfGla~~~~~~~~--------------~~~~~~~~gt~~y 990 (1109)
+||||||+|||++. ++.+|++|||+++....... ........||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999964 34566666666653211000 0001124688899
Q ss_pred ccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHH
Q 001275 991 IAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVI 1070 (1109)
Q Consensus 991 ~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 1070 (1109)
||||++.+..++.++|||||||++|||++|..|+.... .....+.. ....+. ......
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~----------~~~~~~---------~~~~~~ 239 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRH----------RVLPPQ---------ILLNWP 239 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHH----------hhcChh---------hhhcCH
Confidence 99999999999999999999999999999887753211 00000000 000110 011123
Q ss_pred HHHHHHHhccCCCCCCCCCHHHHHHHhh
Q 001275 1071 DVLLVALRCTEKKPSNRPNMRDVVRQLV 1098 (1109)
Q Consensus 1071 ~l~~l~~~cl~~dP~~RPs~~evl~~L~ 1098 (1109)
+...++.+|++.+|.+||+|.|+++|-.
T Consensus 240 ~~~~~~~~~L~~~P~~Rps~~eil~h~~ 267 (793)
T PLN00181 240 KEASFCLWLLHPEPSCRPSMSELLQSEF 267 (793)
T ss_pred HHHHHHHHhCCCChhhCcChHHHhhchh
Confidence 3456777999999999999999998754
No 420
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.88 E-value=1.8e-22 Score=207.68 Aligned_cols=169 Identities=19% Similarity=0.182 Sum_probs=125.4
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCce
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTT 980 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 980 (1109)
|+|.++++..+ ..+++..++.++.|+++||+||| +.+ ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc----
Confidence 78999997643 34899999999999999999999 555 999999999999999 99998664321
Q ss_pred eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHh
Q 001275 981 SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEM 1060 (1109)
Q Consensus 981 ~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 1060 (1109)
..||+.|+|||++.+..++.++|||||||++|||++|+.||............+....... ... +.....
T Consensus 64 ---~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~-- 133 (176)
T smart00750 64 ---SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD-DPR----DRSNLE-- 133 (176)
T ss_pred ---CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC-Ccc----ccccHH--
Confidence 2588999999999999999999999999999999999999864322222222221111100 000 000000
Q ss_pred hhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1061 LVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1061 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
......++.+++.+|++.+|++||++.|+++++...
T Consensus 134 ----~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 134 ----SVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred ----HHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 001112578888999999999999999999998765
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=1.8e-21 Score=236.67 Aligned_cols=289 Identities=27% Similarity=0.384 Sum_probs=177.3
Q ss_pred CCCcEeeccCccccCCCCccccccCccceeccccccccccCCcccccccccceecccccccccccccccCCCcccceeec
Q 001275 119 SALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYVFLNNNSLSGSIPRNVGDLKEVEALWL 198 (1109)
Q Consensus 119 ~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L 198 (1109)
.+.+.|++++++++ .+|..+. ++|+.|+|++|+++ .+|..+. .+|++|++++|+++ .+|..+. .+|+.|+|
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 34566666666666 3555442 45666777777666 4555543 36677777777666 3454443 35677777
Q ss_pred ccccCCCCcccccccccCccEEEeccccccCcCchhcccccccccccccCcccCCcccccccCCCCcchhccccccccCC
Q 001275 199 FSNRLSGTIPESIGNCYRLQELYLNENKLMGFLPESLSNLENLVYLDVGDNNLEGRINFGSEKCKNLTFLDLSYNRFSGG 278 (1109)
Q Consensus 199 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 278 (1109)
++|+++ .+|..+. ++|+.|++++|+++. +|+.+. ++|+.|++++|+|++. |..+ .++|+.|++++|.++.
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~L-P~~l--p~sL~~L~Ls~N~Lt~- 318 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRTL-PAHL--PSGITHLNVQSNSLTA- 318 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccCc-cccccC--CCCcEEECCCCccccC-cccc--hhhHHHHHhcCCcccc-
Confidence 777776 4555553 467777777777764 455443 3677777777777753 2222 2467777788877774
Q ss_pred CCcccccccCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCCccccccccceeeccCcccCCCCCccccCC
Q 001275 279 ISPNLGNCSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEGEIPDELGQL 358 (1109)
Q Consensus 279 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 358 (1109)
+|..+ .++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+|..+. ++|+.|+|++|+++ .+|..+.
T Consensus 319 LP~~l--~~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~-- 387 (754)
T PRK15370 319 LPETL--PPGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP-- 387 (754)
T ss_pred CCccc--cccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--
Confidence 34333 2577888888888774 555443 67888888888887 4665553 57888888888887 4565543
Q ss_pred CCccEEEccCccccccCchHHHh----hcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcc-cCCccccCCCCC
Q 001275 359 SNLQDLELFDNRLTGEFPVSIWR----IASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSG-VIPQSLGINSSL 433 (1109)
Q Consensus 359 ~~L~~L~L~~N~l~~~~~~~~~~----l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~~~~L 433 (1109)
..|+.|++++|+|+ .+|..+.. ++++..|++.+|.++. ..+.+|+.| ++.+.+.| .++...+..+.+
T Consensus 388 ~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l 459 (754)
T PRK15370 388 AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIV 459 (754)
T ss_pred HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCCcccccccccccc
Confidence 36888888888887 45655443 4677888888888762 233344444 34455444 334444444455
Q ss_pred ceEEecCCcccc
Q 001275 434 MQLDFINNSFTG 445 (1109)
Q Consensus 434 ~~L~ls~N~l~~ 445 (1109)
+....-.+.+.+
T Consensus 460 ~~~~~l~~a~~~ 471 (754)
T PRK15370 460 RVTRPLHQAVQG 471 (754)
T ss_pred cccchHHHHHhc
Confidence 444434444443
No 422
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=1.3e-21 Score=219.19 Aligned_cols=166 Identities=20% Similarity=0.210 Sum_probs=129.0
Q ss_pred HhhCCCCCceeecccCeEEEEEEeC--CCcEEEEEEeeecc----cccChHHHHHHHHHHhcCCCCceee-EeeEEecCC
Q 001275 817 ATENLNAKHVIGRGAHGIVYKASLG--PNAVFAVKKLAFRG----HKRGSLSMKREIQTIGKIRHRNLVR-LEDFWLRKD 889 (1109)
Q Consensus 817 ~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~ 889 (1109)
...+|...+.||+|+||+||+|... +++.||||++.... .......+.+|++++++++|+|+++ ++++ +
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 3467999999999999999999764 57888999874221 1223456899999999999999985 4432 4
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecc-CCCCeeeCCCCcEEEecccC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDI-KPENILLDSEMEPHISDFGI 968 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-k~~NIll~~~~~~kl~DfGl 968 (1109)
..++||||+++++|... .. .. ...++.++++||+||| +.+|+|||| ||+||+++.++.+||+|||+
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~------~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP------HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc------cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 57999999999999732 11 01 1467889999999999 899999999 99999999999999999999
Q ss_pred CcccCCCCCCce------eeecccCcccccccccccC
Q 001275 969 AKLLDKSPASTT------SISVVGTIGYIAPENAFTT 999 (1109)
Q Consensus 969 a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 999 (1109)
|+.+........ .....+++.|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 997754432111 1345788899999988644
No 423
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=1.5e-21 Score=237.47 Aligned_cols=224 Identities=26% Similarity=0.454 Sum_probs=125.9
Q ss_pred ccccEEEcCCCCCCCCCCCccccccccceeeccCcccCCCCCccccCCCCccEEEccCccccccCchHHHhhcccceeec
Q 001275 311 ARLSSLDLSENQLSGKIPPELGKCKYLTVLHLYANQLEGEIPDELGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLLV 390 (1109)
Q Consensus 311 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 390 (1109)
.+.+.|+++++.++ .+|..+. +.|+.|+|++|+++ .+|..+. ++|++|++++|+|+ .+|..+. .+|+.|++
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~L 248 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMEL 248 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEEC
Confidence 45678999999988 5676553 57888999999888 5665543 57888888888887 4565443 35677777
Q ss_pred cCCccCCCCchhhhccCCCCeEEccCCcCcccCCccccCCCCCceEEecCCcccccCCCCcccCccceEEECCCcccccC
Q 001275 391 YNNNLLGKLPLEMTELKQLKNISLYNNQFSGVIPQSLGINSSLMQLDFINNSFTGEIPPNLCFGKQLRVLNMGQNQFHGP 470 (1109)
Q Consensus 391 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~L~~L~ls~N~l~~~~p~~~~~~~~L~~L~L~~N~l~~~ 470 (1109)
++|++. .+|..+. ++|+.|++++|+++ .+|..+. . +|+.|++++|+|++
T Consensus 249 s~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~------------------------sL~~L~Ls~N~Lt~- 297 (754)
T PRK15370 249 SINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--E------------------------ELRYLSVYDNSIRT- 297 (754)
T ss_pred cCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--C------------------------CCcEEECCCCcccc-
Confidence 777766 4454443 35556666666555 2343332 2 44555555555542
Q ss_pred CCcccCCCCccchhhccCcccCCCCCCCCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhccc
Q 001275 471 IPSLLGSCPTLWRVILKQNQLTGALPEFSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLV 550 (1109)
Q Consensus 471 ~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 550 (1109)
+|..+. ++|+.|++++|+++..++.+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+|+ .+|..+. +
T Consensus 298 LP~~lp--~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~ 367 (754)
T PRK15370 298 LPAHLP--SGITHLNVQSNSLTALPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--P 367 (754)
T ss_pred Ccccch--hhHHHHHhcCCccccCCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--C
Confidence 232221 245555666666554322221 456666666666653 454442 45666666666655 2444332 3
Q ss_pred ccceeecccccccccCCccccCCCCccEEEecCcccc
Q 001275 551 SLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFNLLN 587 (1109)
Q Consensus 551 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~ 587 (1109)
+|+.|+|++|+|+ .+|..+. ..|+.||+++|+|+
T Consensus 368 ~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~ 401 (754)
T PRK15370 368 TITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV 401 (754)
T ss_pred CcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc
Confidence 4555555555554 3343332 23444455555444
No 424
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84 E-value=5.8e-22 Score=198.78 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=183.5
Q ss_pred CCCCceeecccCeEEEEEEeCCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEecc
Q 001275 821 LNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
.+...+|.+...|+.|+|+++.+ .+++|++.... .....++|..|+-.++-+.||||+.++|.|.......++..||+
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 34455688899999999999844 44667664433 33445789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
.|+|+..+++.. .-..+-.++.+++.++|+|++|||+. .+-|..--+.+..|++|++.+++|.- +-++ ...
T Consensus 271 ~gslynvlhe~t-~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~k------fsf 341 (448)
T KOG0195|consen 271 FGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTK------FSF 341 (448)
T ss_pred chHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-ccce------eee
Confidence 999999999744 33466778899999999999999943 33344456899999999999887751 1111 111
Q ss_pred eeeecccCcccccccccccCCCC---ccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhh
Q 001275 980 TSISVVGTIGYIAPENAFTTAKS---KESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSL 1056 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~~~~---~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 1056 (1109)
...+..-.+.||+||.+..++.+ .++|+|||++++||+.|...||..-..-+....- . .+.++..+.
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki----a---leglrv~ip--- 411 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI----A---LEGLRVHIP--- 411 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh----h---hccccccCC---
Confidence 22234567899999998877653 5899999999999999999999653221111000 0 011111111
Q ss_pred hHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1057 MEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1057 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
+-....+.+++.-|+.+||.+||.++.++-.|++-
T Consensus 412 ---------pgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 412 ---------PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred ---------CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 11233466677789999999999999999888764
No 425
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=4.6e-20 Score=208.41 Aligned_cols=259 Identities=21% Similarity=0.260 Sum_probs=188.4
Q ss_pred CCCCCceeecccCeEEEEEEeCCC--cEEEEEEeeecccccChHHHHHHHHHHhcCCC----CceeeEeeEE-ecCCcee
Q 001275 820 NLNAKHVIGRGAHGIVYKASLGPN--AVFAVKKLAFRGHKRGSLSMKREIQTIGKIRH----RNLVRLEDFW-LRKDCGI 892 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~-~~~~~~~ 892 (1109)
+|.+.++||+|+||.||.|..... ..+|+|........... .+..|..++..+.. +++.++++.+ ......+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 799999999999999999976653 47888876544333333 67888888888863 6889999988 4777889
Q ss_pred EEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC-----CcEEEeccc
Q 001275 893 IMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE-----MEPHISDFG 967 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-----~~~kl~DfG 967 (1109)
+||+.+ |.+|.++..... ...++..++.+|+.|++.+|+++| +.+++||||||.|+.+... ..+.+.|||
T Consensus 98 iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 999887 669999876654 567999999999999999999999 9999999999999999765 469999999
Q ss_pred CCcccC--CCCC-----Cce-eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHH
Q 001275 968 IAKLLD--KSPA-----STT-SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVR 1039 (1109)
Q Consensus 968 la~~~~--~~~~-----~~~-~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~ 1039 (1109)
+++... .... ... .....||.+|+++....+.+.+.+.|+||++.++.|+..|..||........ ......
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~ 251 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEK 251 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHH
Confidence 998332 1111 111 2345699999999999999999999999999999999999999854321111 111100
Q ss_pred HhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1040 SVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1040 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.... ..... .....+.+ +.++...+-..+..++|....+...+.+.
T Consensus 252 ~~~~------~~~~~------~~~~~~~~---~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 252 DPRK------LLTDR------FGDLKPEE---FAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred Hhhh------hcccc------ccCCChHH---HHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 0000 00000 00111222 33333344457888999999998887655
No 426
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.84 E-value=1.9e-22 Score=189.16 Aligned_cols=186 Identities=30% Similarity=0.527 Sum_probs=163.6
Q ss_pred cccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEecCccccCCCCcccccccccce
Q 001275 523 GNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNGSIPSSLRSWKSLSI 602 (1109)
Q Consensus 523 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 602 (1109)
.++.+.+.|.||+|+++ .+|..++.|.+|+.|++++|+|+ .+|.+++.+++|+.|+++-|++. .+|..|++++.|+.
T Consensus 30 f~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred cchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhh
Confidence 35677888889999998 67888999999999999999998 78999999999999999999998 88999999999999
Q ss_pred eccccccccC-CCcchhhhhhhhhhhhcccCcCCCCCCCCchhhhhhhhhhcccccccccccCcchhhcccCCeEEccCC
Q 001275 603 LKLSENHFTG-GIPTFISELEKLLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGLTGRIPSDLEKLSKLEQLDISSN 681 (1109)
Q Consensus 603 L~L~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N 681 (1109)
|||.+|++.. .+|..|-.++.|+.|+|++|.|. .+|+.+|++++| +.|.+..|.+- ++|.+++.++.|++|++.+|
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~l-qil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNL-QILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcce-eEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 9999999874 58999999999999999999998 899999999999 47999999999 89999999999999999999
Q ss_pred cccccCCCCCccccc---eEEeeeccccccccchhh
Q 001275 682 NLTGTLSPLSNIHSL---VEVNVSYNLFTGPVPETL 714 (1109)
Q Consensus 682 ~l~g~~~~l~~~~~l---~~l~~~~n~l~g~~p~~~ 714 (1109)
+|+-.+|.++++.-+ +.+.+.+|++-.+|-+++
T Consensus 184 rl~vlppel~~l~l~~~k~v~r~E~NPwv~pIaeQf 219 (264)
T KOG0617|consen 184 RLTVLPPELANLDLVGNKQVMRMEENPWVNPIAEQF 219 (264)
T ss_pred eeeecChhhhhhhhhhhHHHHhhhhCCCCChHHHHH
Confidence 999766668776433 457788899888877654
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=2e-21 Score=232.33 Aligned_cols=259 Identities=20% Similarity=0.212 Sum_probs=190.3
Q ss_pred CCCceeecccCeEEEEEEe-CCCcEEEEEEeeec--c---cccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 822 NAKHVIGRGAHGIVYKASL-GPNAVFAVKKLAFR--G---HKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 822 ~~~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~--~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
...+++|.|++|.|+.+.. ......+.|..... . .......+..|+-+-..+.|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 3467799999998887743 33444444443211 1 1111223667888888999999988887777766666669
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCC
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKS 975 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 975 (1109)
||+++ +|+.++.... .++..++..++.|+..|++|+| +.+|.|||+|++|++++.++.+||+|||.+.....+
T Consensus 401 E~~~~-Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhccc---ccchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 9999987642 3778889999999999999999 999999999999999999999999999999877555
Q ss_pred CCC--ceeeecccCcccccccccccCCCC-ccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCcccccccc
Q 001275 976 PAS--TTSISVVGTIGYIAPENAFTTAKS-KESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIV 1052 (1109)
Q Consensus 976 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1052 (1109)
... ....+.+|+..|+|||+..+..|+ ...||||.|+++..|++|+.||............-. .........
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~-----~~~~~~~~~ 548 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN-----YSDQRNIFE 548 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhc-----ccccccccc
Confidence 443 445678999999999999999995 578999999999999999999976544433220000 000000000
Q ss_pred chhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1053 DLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1053 d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
. ...-......+...++.+|++.||++|.+++++++.=|-
T Consensus 549 ~-------~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~ 588 (601)
T KOG0590|consen 549 G-------PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWI 588 (601)
T ss_pred C-------hHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHh
Confidence 0 011123444556678889999999999999999876443
No 428
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=2.4e-19 Score=185.74 Aligned_cols=199 Identities=21% Similarity=0.317 Sum_probs=169.7
Q ss_pred CCCCCceeecccCeEEEEEE-eCCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKAS-LGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.|++.++||+|.||..+.|+ +-+++.||||.-. .+.....+..|.+..+.+ ..++|...+.|..++-+-.+|+|.
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEP---rkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEP---RKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecc---ccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 67889999999999999994 4579999999653 333445678899988888 578999998888888888999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-----cEEEecccCCccc
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-----EPHISDFGIAKLL 972 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-----~~kl~DfGla~~~ 972 (1109)
+ |-||.|.+.-++. .++.+++..||.|++.-++|+| ++..|.|||||+|+||...+ .+.++|||+|+.+
T Consensus 106 L-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Y 179 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEY 179 (449)
T ss_pred h-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhh
Confidence 8 5699998877654 4899999999999999999999 89999999999999997543 4899999999988
Q ss_pred CCCCCC-----ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 973 DKSPAS-----TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 973 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
.+.... .......||.+||+-.-..+++.+.+.|.=|+|-++.+.+.|..||.+-
T Consensus 180 rDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 180 RDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred cCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 655432 2334568999999999999999999999999999999999999999764
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.81 E-value=7.7e-19 Score=200.35 Aligned_cols=261 Identities=29% Similarity=0.395 Sum_probs=196.3
Q ss_pred CCCCceeecccCeEEEEEEeCCCcEEEEEEeeeccccc--ChHHHHHHHHHHhcCCCC-ceeeEeeEEecCCceeEEEEe
Q 001275 821 LNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR--GSLSMKREIQTIGKIRHR-NLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 897 (1109)
|...+.+|.|+||.||++... ..+++|.+....... ....+.+|+..+..+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999877 788999886655544 367899999999999988 799999999777778999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-cEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-EPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfGla~~~~~~~ 976 (1109)
+.++++.+++........+.......++.|++.+++|+| ..+++|||+||+||+++..+ .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977765331125888999999999999999999 88899999999999999988 79999999998654433
Q ss_pred CCc----eeeecccCccccccccccc---CCCCccCcchhhHHHHHHHHhCCCCCCCCccc--cccHHHHHHHhhcCccc
Q 001275 977 AST----TSISVVGTIGYIAPENAFT---TAKSKESDVYSYGVVLLELITRKKALDPSYKE--RTDIVGWVRSVWSDTEE 1047 (1109)
Q Consensus 977 ~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~sDvwSlGvil~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 1047 (1109)
... ......|+..|+|||.+.+ ..+....|+||+|++++++++|..|+...... .......+...... .
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~ 234 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP--S 234 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--c
Confidence 221 2345789999999999987 57899999999999999999999996543321 11111111111110 0
Q ss_pred cccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1048 INDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1048 ~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.......... ......+.+++..|+..+|..|.++.+...+
T Consensus 235 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 235 LASPLSPSNP--------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccccCcccc--------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 0000000000 1112345567778999999999999887765
No 430
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.78 E-value=5.3e-19 Score=175.24 Aligned_cols=201 Identities=20% Similarity=0.281 Sum_probs=166.8
Q ss_pred hhCCCCCceeecccCeEEEEE-EeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCC-CceeeEeeEEecCCceeEEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKA-SLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRH-RNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 895 (1109)
..+|.+.++||+|+||.+|.| ...+|+.||||.-. .......+..|..+.+.++| ..|..+..|..+++.-.+||
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es---~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLES---SKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeec---ccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 367999999999999999999 55789999999753 33334467788899988864 56777777888888899999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC---CcEEEecccCCccc
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE---MEPHISDFGIAKLL 972 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfGla~~~ 972 (1109)
|.. |.||.+.+..... .++.++++..|-|++.-++|+| .++++||||||+|+|..-+ ..+.++|||+|+.+
T Consensus 91 dLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 998 5699998876543 3888999999999999999999 8999999999999999643 46899999999877
Q ss_pred CCCCC-----CceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 973 DKSPA-----STTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 973 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
.+... ........||.+|.+-....+...+.+.|+=|+|.++.++-.|..||.+.
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 54322 12234568999999988888888899999999999999999999999764
No 431
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=9.6e-21 Score=177.80 Aligned_cols=177 Identities=29% Similarity=0.492 Sum_probs=88.4
Q ss_pred CCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEE
Q 001275 501 NPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFD 580 (1109)
Q Consensus 501 ~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 580 (1109)
+...+.|.||+|+++ .+|..|.++.+|+.|++++|+++ ..|..+..+++|+.|+++-|++. .+|..|+.++.|++||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 333444444444444 44444555555555555555554 34445555555555555555554 4555555555555555
Q ss_pred ecCccccC-CCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCCchhhhhhhhhhccccccc
Q 001275 581 VSFNLLNG-SIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGL 659 (1109)
Q Consensus 581 ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l 659 (1109)
|++|+++. .+|..|..+..|+-|+|++|.|. .+|..++.+++|+.|.+.+|.+. ++|.++|.++.|. .|++.+|++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lr-elhiqgnrl 185 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLR-ELHIQGNRL 185 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHH-HHhccccee
Confidence 55555442 34444555555555555555555 45555555555555555555554 4555555555552 455555555
Q ss_pred ccccCcchhhccc---CCeEEccCCccc
Q 001275 660 TGRIPSDLEKLSK---LEQLDISSNNLT 684 (1109)
Q Consensus 660 ~g~ip~~l~~l~~---L~~L~Ls~N~l~ 684 (1109)
+ .+|++++++.- =+.+.+.+|..-
T Consensus 186 ~-vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 186 T-VLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred e-ecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 5 45555544332 123444555544
No 432
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.78 E-value=2.6e-19 Score=186.15 Aligned_cols=171 Identities=16% Similarity=0.190 Sum_probs=132.7
Q ss_pred hhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccC--hH------HHHHHHHHHhcCCCCceeeEeeEEecC-
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRG--SL------SMKREIQTIGKIRHRNLVRLEDFWLRK- 888 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~------~~~~E~~~l~~l~h~niv~l~~~~~~~- 888 (1109)
..+|+..+++|.|+||.||.+.. ++..+|+|.+........ .. .+++|++.+.+++|++|..+.+++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 57899999999999999999866 477899999854322211 11 268999999999999999998886533
Q ss_pred -------CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcE
Q 001275 889 -------DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEP 961 (1109)
Q Consensus 889 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 961 (1109)
...++||||++|.+|.++.. .+. ....+++.++..+| ..+++|||+||+||+++.++ +
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-E
Confidence 35789999999999988732 222 34568999999999 99999999999999999988 9
Q ss_pred EEecccCCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHH
Q 001275 962 HISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELI 1018 (1109)
Q Consensus 962 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ell 1018 (1109)
+++|||........... ..+...+.+..++|+|++|+++....
T Consensus 174 ~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999988755321110 11445566778999999999876654
No 433
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.77 E-value=9.8e-19 Score=180.60 Aligned_cols=141 Identities=16% Similarity=0.161 Sum_probs=108.7
Q ss_pred CceeecccCeEEEEEEeCCCcEEEEEEeeeccccc-C-------h-----------------HHHHHHHHHHhcCCCCce
Q 001275 824 KHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR-G-------S-----------------LSMKREIQTIGKIRHRNL 878 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~-------~-----------------~~~~~E~~~l~~l~h~ni 878 (1109)
...||+|+||.||+|...+|+.||||++....... . . ....+|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999999988889999999986532111 1 1 122459999999988776
Q ss_pred eeEeeEEecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEEeccCCCCeeeCC
Q 001275 879 VRLEDFWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYL-HYDCDPPIVHRDIKPENILLDS 957 (1109)
Q Consensus 879 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dlk~~NIll~~ 957 (1109)
.....+.. ...++||||++++++....... ..+++.....++.|++.+++|+ | +.+|+||||||+||+++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~- 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-
Confidence 44333322 2348999999998776543221 2478899999999999999999 7 78999999999999998
Q ss_pred CCcEEEecccCCcccC
Q 001275 958 EMEPHISDFGIAKLLD 973 (1109)
Q Consensus 958 ~~~~kl~DfGla~~~~ 973 (1109)
++.++++|||+|....
T Consensus 153 ~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 153 DGKLYIIDVSQSVEHD 168 (190)
T ss_pred CCcEEEEEccccccCC
Confidence 4789999999997553
No 434
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.76 E-value=2.6e-19 Score=211.05 Aligned_cols=252 Identities=20% Similarity=0.240 Sum_probs=180.5
Q ss_pred CCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHH--hcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTI--GKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
++...+.+|++.|=+|.+|+.+.|. |+||++.+....-....|.++++-. ...+|||++++.-+-......|+|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 5667888999999999999999887 7999996665555555555544443 444899999998887777788999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC-CCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD-KSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~-~~~ 976 (1109)
+.+ +|+|.+.. ++.+...+.+-|+.|+..|+..+| ..+|+|||||.+|||++.-.-+.|+||.--+... ..+
T Consensus 103 vkh-nLyDRlST---RPFL~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 103 VKH-NLYDRLST---RPFLVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred Hhh-hhhhhhcc---chHHHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 976 99998865 335777888899999999999999 9999999999999999999999999997654321 112
Q ss_pred CCceeeeccc----CcccccccccccC----------C-CCccCcchhhHHHHHHHHhC-CCCCCCCccccccHHHHHHH
Q 001275 977 ASTTSISVVG----TIGYIAPENAFTT----------A-KSKESDVYSYGVVLLELITR-KKALDPSYKERTDIVGWVRS 1040 (1109)
Q Consensus 977 ~~~~~~~~~g----t~~y~aPE~~~~~----------~-~~~~sDvwSlGvil~elltg-~~p~~~~~~~~~~~~~~~~~ 1040 (1109)
.+.....+.. -..|.|||-+... . .+++-||||+||++.|+++- +++|.- .+...-
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L--------SQL~aY 247 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL--------SQLLAY 247 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--------HHHHhH
Confidence 2222222222 2369999955431 1 46789999999999999985 666632 111111
Q ss_pred hhcCccccccccch-hhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhhC
Q 001275 1041 VWSDTEEINDIVDL-SLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVDA 1100 (1109)
Q Consensus 1041 ~~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~~ 1100 (1109)
.... + .++ ...++. ++ ..+..+++.|++.||++|.++++.++.-+..
T Consensus 248 r~~~-----~-~~~e~~Le~I-----ed--~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~ 295 (1431)
T KOG1240|consen 248 RSGN-----A-DDPEQLLEKI-----ED--VSLRNLILSMIQRDPSKRLSAEDYLQKYRGL 295 (1431)
T ss_pred hccC-----c-cCHHHHHHhC-----cC--ccHHHHHHHHHccCchhccCHHHHHHhhhcc
Confidence 0000 0 011 111111 11 1455678899999999999999999986654
No 435
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=3.6e-18 Score=194.20 Aligned_cols=216 Identities=24% Similarity=0.414 Sum_probs=161.6
Q ss_pred HhcCCCCceeeEeeEEecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe-EEecc
Q 001275 870 IGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPI-VHRDI 948 (1109)
Q Consensus 870 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i-vH~Dl 948 (1109)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.|.+.. ....++|.....++.++++|++|+| ..+| .|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh---~s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLH---NSPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHh---cCcceeeeee
Confidence 4678999999999999999999999999999999999976 2345899999999999999999999 4454 89999
Q ss_pred CCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCcccccccccccCC-------CCccCcchhhHHHHHHHHhCC
Q 001275 949 KPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFTTA-------KSKESDVYSYGVVLLELITRK 1021 (1109)
Q Consensus 949 k~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-------~~~~sDvwSlGvil~elltg~ 1021 (1109)
+++|.+++..+.+|++|||+.................-..-|.|||.+.... .+.++||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 9999999999999999999988664311111122223445799999887641 367899999999999999999
Q ss_pred CCCCCCccccc--cHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1022 KALDPSYKERT--DIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1022 ~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.||+....... .+..+++.. ... ..-|.+... .+...++..++.+||..+|++||+++++-..++.
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~~--~~~----~~rP~i~~~------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~ 223 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKKG--GSN----PFRPSIELL------NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT 223 (484)
T ss_pred CccccccccCChHHHHHHHHhc--CCC----CcCcchhhh------hhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence 99976432222 222222220 111 111111100 0223367888889999999999999999988877
Q ss_pred CCC
Q 001275 1100 ASV 1102 (1109)
Q Consensus 1100 ~~~ 1102 (1109)
+..
T Consensus 224 ~~~ 226 (484)
T KOG1023|consen 224 INK 226 (484)
T ss_pred hcc
Confidence 633
No 436
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=3.9e-18 Score=172.99 Aligned_cols=188 Identities=14% Similarity=0.116 Sum_probs=138.9
Q ss_pred CCCceeecccCeEEEEEEeCCCcEEEEEEeeeccccc---ChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEEEEe
Q 001275 822 NAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR---GSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 822 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+...|++|+||+||.+.. ++.+++.+.+....... ....+.+|++++++++ |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999998766 57787777664333211 1225789999999995 5889999886 446999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecc-CCCCeeeCCCCcEEEecccCCcccCCCC
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDI-KPENILLDSEMEPHISDFGIAKLLDKSP 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl-k~~NIll~~~~~~kl~DfGla~~~~~~~ 976 (1109)
++|.+|.+.... ....++.|++++++++| ..+|+|||| ||+||++++++.++|+|||+|.......
T Consensus 80 I~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 80 LAGAAMYQRPPR----------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred ecCccHHhhhhh----------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999998754321 11357789999999999 899999999 7999999999999999999998654332
Q ss_pred CC----ce-------eeecccCcccccccccccC-CCC-ccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 977 AS----TT-------SISVVGTIGYIAPENAFTT-AKS-KESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 977 ~~----~~-------~~~~~gt~~y~aPE~~~~~-~~~-~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
.. .. ......++.|++|+-..-- ..+ ...+.++-|.-+|.++|++.+....
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 10 00 1123467778888733221 222 5678899999999999999887543
No 437
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.75 E-value=9.9e-18 Score=174.03 Aligned_cols=141 Identities=20% Similarity=0.233 Sum_probs=110.8
Q ss_pred CceeecccCeEEEEEEeCCCcEEEEEEeeeccccc--------------------C-----hHHHHHHHHHHhcCCCCce
Q 001275 824 KHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR--------------------G-----SLSMKREIQTIGKIRHRNL 878 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------~-----~~~~~~E~~~l~~l~h~ni 878 (1109)
...||+|+||.||+|...+|+.||||++....... . ...+.+|++.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999987789999999986542110 0 1124678999999999987
Q ss_pred eeEeeEEecCCceeEEEEeccCCCHHHH-HhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeC
Q 001275 879 VRLEDFWLRKDCGIIMYRYMENGSLRDV-LHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLD 956 (1109)
Q Consensus 879 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~ 956 (1109)
.....+... ..++||||++++++... +.. ..++.....+++.+++.++.++| + .+|+||||||+||+++
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~----~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~ 152 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD----VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH 152 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh----ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE
Confidence 554444332 34899999998865433 332 23677889999999999999999 7 8999999999999999
Q ss_pred CCCcEEEecccCCcccCC
Q 001275 957 SEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 957 ~~~~~kl~DfGla~~~~~ 974 (1109)
++.++|+|||++.....
T Consensus 153 -~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 153 -DGKPYIIDVSQAVELDH 169 (190)
T ss_pred -CCCEEEEEcccceecCC
Confidence 88999999999986643
No 438
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=5e-20 Score=209.23 Aligned_cols=282 Identities=24% Similarity=0.257 Sum_probs=134.3
Q ss_pred eecCCCccc-ccCCCCCCCCCCCcEeeccCccccC----CCCccccccCccceeccccccccccCCcccccccccceecc
Q 001275 100 IDLSSNNFS-GNIPPKLGNCSALEYLDLSTNGFTG----DIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYVFL 174 (1109)
Q Consensus 100 L~L~~n~l~-~~~p~~l~~l~~L~~L~Ls~n~l~~----~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 174 (1109)
|+|..+.++ +..+..+..+..|++|+++++.++. .++..+...++|++|+++++.+.+ .+..+
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~----------- 70 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPRGL----------- 70 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cchHH-----------
Confidence 455555555 2333344455556666666666532 133344445555555555554431 01000
Q ss_pred cccccccccccccCCCcccceeecccccCCCCcccccccccC---ccEEEeccccccC----cCchhcccc-cccccccc
Q 001275 175 NNNSLSGSIPRNVGDLKEVEALWLFSNRLSGTIPESIGNCYR---LQELYLNENKLMG----FLPESLSNL-ENLVYLDV 246 (1109)
Q Consensus 175 s~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~---L~~L~L~~N~l~~----~~~~~l~~l-~~L~~L~L 246 (1109)
..++..+..+++|++|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++
T Consensus 71 ------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L 144 (319)
T cd00116 71 ------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVL 144 (319)
T ss_pred ------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEc
Confidence 123344445556666666666665544444444444 6666666666552 122233344 45555555
Q ss_pred cCcccCCcccccccCCCCcchhccccccccCCCCcccccccCCcEEEeecCCCCCc----CCccccccccccEEEcCCCC
Q 001275 247 GDNNLEGRINFGSEKCKNLTFLDLSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGS----IPSSFGLLARLSSLDLSENQ 322 (1109)
Q Consensus 247 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~ 322 (1109)
++|.+++.... .++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.
T Consensus 145 ~~n~l~~~~~~--------------------~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~ 204 (319)
T cd00116 145 GRNRLEGASCE--------------------ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNG 204 (319)
T ss_pred CCCcCCchHHH--------------------HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCc
Confidence 55555421110 0111222333444444444444321 11222233355555555555
Q ss_pred CCCC----CCCccccccccceeeccCcccCCCCCcccc-----CCCCccEEEccCccccc----cCchHHHhhcccceee
Q 001275 323 LSGK----IPPELGKCKYLTVLHLYANQLEGEIPDELG-----QLSNLQDLELFDNRLTG----EFPVSIWRIASLEYLL 389 (1109)
Q Consensus 323 l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~ 389 (1109)
+++. ++..+..+++|++|++++|.+++.....+. ..++|++|++++|.+++ .+...+..+++|++++
T Consensus 205 i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~ 284 (319)
T cd00116 205 LTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELD 284 (319)
T ss_pred cChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEE
Confidence 4422 122334455566666666555542222221 12566677777766652 1223344456677777
Q ss_pred ccCCccCCC----Cchhhhcc-CCCCeEEccCCcC
Q 001275 390 VYNNNLLGK----LPLEMTEL-KQLKNISLYNNQF 419 (1109)
Q Consensus 390 l~~N~l~~~----~~~~~~~l-~~L~~L~L~~N~l 419 (1109)
+++|.+... ....+... +.|++|++.+|++
T Consensus 285 l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 285 LRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 777777644 22333333 5777777777754
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.74 E-value=7.1e-18 Score=204.51 Aligned_cols=196 Identities=18% Similarity=0.226 Sum_probs=163.2
Q ss_pred hhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCC---CCceeeEeeEEecCCceeEE
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIR---HRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv 894 (1109)
.+.|.+.+.+|+|+||+||+|...+|+.||+|+-+.. ...+|.-=.+++.|++ -+-|..+..++.-.+..++|
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~----~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv 772 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPP----NPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLV 772 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCC----CceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceee
Confidence 3567788899999999999998888999999976332 2333433345555555 23455566666677888999
Q ss_pred EEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-------CCcEEEeccc
Q 001275 895 YRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-------EMEPHISDFG 967 (1109)
Q Consensus 895 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-------~~~~kl~DfG 967 (1109)
+||.+.|+|.+++.. ...++|..++.++.|+++.+++|| ..+||||||||+|.++.. ...++|+|||
T Consensus 773 ~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 773 SEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred eeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 999999999999984 345899999999999999999999 999999999999999942 3458999999
Q ss_pred CCcccCCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCC
Q 001275 968 IAKLLDKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKA 1023 (1109)
Q Consensus 968 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p 1023 (1109)
.+..+.-.....+..+.++|-.+--+|...++.+++++|-|.++.+++-|+.|++.
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~ 902 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYM 902 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 99988766566677788999999999999999999999999999999999999863
No 440
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=7.3e-20 Score=207.87 Aligned_cols=162 Identities=25% Similarity=0.320 Sum_probs=72.9
Q ss_pred cCCcEEEeecCCCCCc----CCccccccccccEEEcCCCCCCCC----CCCccccccccceeeccCcccCCCC----Ccc
Q 001275 287 SSLTHLDIVGSKLTGS----IPSSFGLLARLSSLDLSENQLSGK----IPPELGKCKYLTVLHLYANQLEGEI----PDE 354 (1109)
Q Consensus 287 ~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~~L~L~~N~l~~~~----p~~ 354 (1109)
++|+.|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++.. +..
T Consensus 137 ~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~ 216 (319)
T cd00116 137 PALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAET 216 (319)
T ss_pred CCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHH
Confidence 4555666666655532 122344445566666666655531 1222333345555555555554321 122
Q ss_pred ccCCCCccEEEccCccccccCchHHHhhcccceeeccCCccCCCCchhhhccCCCCeEEccCCcCcc----cCCccccCC
Q 001275 355 LGQLSNLQDLELFDNRLTGEFPVSIWRIASLEYLLVYNNNLLGKLPLEMTELKQLKNISLYNNQFSG----VIPQSLGIN 430 (1109)
Q Consensus 355 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~~ 430 (1109)
+..+++|++|++++|++++.....+... .....++|+.|++++|.++. .+...+..+
T Consensus 217 ~~~~~~L~~L~ls~n~l~~~~~~~l~~~-------------------~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~ 277 (319)
T cd00116 217 LASLKSLEVLNLGDNNLTDAGAAALASA-------------------LLSPNISLLTLSLSCNDITDDGAKDLAEVLAEK 277 (319)
T ss_pred hcccCCCCEEecCCCcCchHHHHHHHHH-------------------HhccCCCceEEEccCCCCCcHHHHHHHHHHhcC
Confidence 3334445555555555443222222211 00012455555555555541 122223334
Q ss_pred CCCceEEecCCccccc----CCCCcccC-ccceEEECCCccc
Q 001275 431 SSLMQLDFINNSFTGE----IPPNLCFG-KQLRVLNMGQNQF 467 (1109)
Q Consensus 431 ~~L~~L~ls~N~l~~~----~p~~~~~~-~~L~~L~L~~N~l 467 (1109)
++|+++|+++|.++.. ....+... ..|+.|++.+|.+
T Consensus 278 ~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 278 ESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred CCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 5566666666666543 22222222 5666677666653
No 441
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=1.3e-17 Score=176.49 Aligned_cols=197 Identities=20% Similarity=0.279 Sum_probs=135.1
Q ss_pred CCCceeeEeeEEecC---------------------------CceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHH
Q 001275 874 RHRNLVRLEDFWLRK---------------------------DCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIAL 926 (1109)
Q Consensus 874 ~h~niv~l~~~~~~~---------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 926 (1109)
+|||||++.++|.+. ...|+||.-.+. +|.+|+.... .+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC----CchHHHHHHHH
Confidence 599999998876531 134788887764 8999987644 45566778899
Q ss_pred HHHHHHHHhhcCCCCCeEEeccCCCCeeeC--CCC--cEEEecccCCcccCCCC----CCceeeecccCccccccccccc
Q 001275 927 GAAHALAYLHYDCDPPIVHRDIKPENILLD--SEM--EPHISDFGIAKLLDKSP----ASTTSISVVGTIGYIAPENAFT 998 (1109)
Q Consensus 927 ~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~--~~~--~~kl~DfGla~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~ 998 (1109)
|+++|+.||| +.+|.|||+|++|||+. +|+ ...|+|||++---+... .........|.-.-||||+...
T Consensus 349 QlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999 99999999999999993 343 46899999875332211 1111223467778999997764
Q ss_pred CCC------CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHH
Q 001275 999 TAK------SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDV 1072 (1109)
Q Consensus 999 ~~~------~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l 1072 (1109)
.+- -.|+|.|+.|.+.||+++...||+...+..-+...+ .+...+.........+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y-------------------qe~qLPalp~~vpp~~ 486 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY-------------------QESQLPALPSRVPPVA 486 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh-------------------hhhhCCCCcccCChHH
Confidence 331 459999999999999999999997521111111110 0000111112233456
Q ss_pred HHHHHhccCCCCCCCCCHHHHHHHh
Q 001275 1073 LLVALRCTEKKPSNRPNMRDVVRQL 1097 (1109)
Q Consensus 1073 ~~l~~~cl~~dP~~RPs~~evl~~L 1097 (1109)
.+++...++.||.+|++..-+...+
T Consensus 487 rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 487 RQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHHHHhcCCccccCCccHHHhHH
Confidence 6678889999999999876555544
No 442
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.70 E-value=2.5e-17 Score=176.44 Aligned_cols=234 Identities=21% Similarity=0.271 Sum_probs=145.7
Q ss_pred CCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeecccc--cChHHHHHHHHHHhcCCC----------CceeeEeeEEe
Q 001275 820 NLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFRGHK--RGSLSMKREIQTIGKIRH----------RNLVRLEDFWL 886 (1109)
Q Consensus 820 ~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h----------~niv~l~~~~~ 886 (1109)
.+...+.||.|+++.||.+++. +++.+|+|.+...... ...+++++|.-....+.+ -.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3455678999999999999775 5899999998655422 234567777766655432 12222222221
Q ss_pred c---------CC--------ceeEEEEeccCCCHHHHHhc---cCC-CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEE
Q 001275 887 R---------KD--------CGIIMYRYMENGSLRDVLHS---ITP-PPTLEWNVRYKIALGAAHALAYLHYDCDPPIVH 945 (1109)
Q Consensus 887 ~---------~~--------~~~lv~e~~~~gsL~~~l~~---~~~-~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 945 (1109)
. .. ..+++|+-+. ++|.+++.. ... ...+....++.+..|+++.+++|| +.++||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEe
Confidence 1 11 2256777774 588877643 111 112445566777799999999999 899999
Q ss_pred eccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCccccccccccc--------CCCCccCcchhhHHHHHHH
Q 001275 946 RDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFT--------TAKSKESDVYSYGVVLLEL 1017 (1109)
Q Consensus 946 ~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~sDvwSlGvil~el 1017 (1109)
+||+|+|++++++|.++++||+.....+.. ......+..|.|||.... ..++.+.|.|++|+++|.|
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~-----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTR-----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEE-----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCce-----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 999999999999999999999877644321 111345678999996643 2468899999999999999
Q ss_pred HhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCC
Q 001275 1018 ITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNR 1087 (1109)
Q Consensus 1018 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 1087 (1109)
++++.||+......... ..+. ...+....+..++..+++.+|.+|
T Consensus 244 WC~~lPf~~~~~~~~~~-----------~~f~--------------~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADPE-----------WDFS--------------RCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGSTSG-----------GGGT--------------TSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCcccccc-----------ccch--------------hcCCcCHHHHHHHHHHccCCcccC
Confidence 99999997542221100 0010 112334455667779999999988
No 443
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.70 E-value=3.2e-18 Score=193.63 Aligned_cols=187 Identities=26% Similarity=0.290 Sum_probs=155.5
Q ss_pred eeecccCeEEEEE----EeCCCcEEEEEEeeecccccCh-HHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEEEEecc
Q 001275 826 VIGRGAHGIVYKA----SLGPNAVFAVKKLAFRGHKRGS-LSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIMYRYME 899 (1109)
Q Consensus 826 ~lG~G~~g~Vy~~----~~~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 899 (1109)
++|+|.||.|+.+ ..+.+..||.|...+....... .....|-.++..++ ||.+|++...+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 3799999999976 3345778888887544322211 14456778888886 9999999999999999999999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCc
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPAST 979 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 979 (1109)
+|.+...+.... .++..........++-+++++| +.+|+|||+|++||+++.+|.+++.|||+++..-....
T Consensus 81 gg~lft~l~~~~---~f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-- 152 (612)
T KOG0603|consen 81 GGDLFTRLSKEV---MFDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-- 152 (612)
T ss_pred cchhhhccccCC---chHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh--
Confidence 999998876543 3677777788889999999999 99999999999999999999999999999986644322
Q ss_pred eeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 980 TSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 980 ~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
.+||..|||||++. .....+|.||||++++||+||..||..
T Consensus 153 ----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 153 ----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 28999999999888 567789999999999999999999865
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.67 E-value=3.8e-16 Score=162.53 Aligned_cols=137 Identities=20% Similarity=0.245 Sum_probs=104.6
Q ss_pred CCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcC-----CCCceeeEeeEEecCC---c-e
Q 001275 821 LNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-----RHRNLVRLEDFWLRKD---C-G 891 (1109)
Q Consensus 821 ~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~---~-~ 891 (1109)
+...+.||+|+||.||. .-.++. .+||++.... ....+.+.+|+++++++ .||||++++|++..+. . .
T Consensus 4 L~~~~~LG~G~~~~Vy~-hp~~~~-k~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA-HPEDAQ-RCIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred cCCcceecCCCceEEEE-CCCCcC-eEEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 34567899999999996 333344 4788875432 23456799999999999 5799999999998764 3 2
Q ss_pred eEEEEe--ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHH-HHhhcCCCCCeEEeccCCCCeeeCC----CCcEEEe
Q 001275 892 IIMYRY--MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHAL-AYLHYDCDPPIVHRDIKPENILLDS----EMEPHIS 964 (1109)
Q Consensus 892 ~lv~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L-~~LH~~~~~~ivH~Dlk~~NIll~~----~~~~kl~ 964 (1109)
.+|+|| +++|+|.+++.... +++. ..++.+++.++ +||| +.+|+||||||+||+++. ++.++|+
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~Li 151 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVC 151 (210)
T ss_pred EEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEE
Confidence 378999 56899999996532 4444 35677778777 9999 999999999999999974 3479999
Q ss_pred cccCC
Q 001275 965 DFGIA 969 (1109)
Q Consensus 965 DfGla 969 (1109)
||+-+
T Consensus 152 Dg~G~ 156 (210)
T PRK10345 152 DNIGE 156 (210)
T ss_pred ECCCC
Confidence 95433
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.63 E-value=1.1e-15 Score=163.35 Aligned_cols=144 Identities=17% Similarity=0.135 Sum_probs=111.2
Q ss_pred hCCCCCceeecccCeEEEEEE--eCCCcEEEEEEeeeccccc-----------------------ChHHHHHHHHHHhcC
Q 001275 819 ENLNAKHVIGRGAHGIVYKAS--LGPNAVFAVKKLAFRGHKR-----------------------GSLSMKREIQTIGKI 873 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~E~~~l~~l 873 (1109)
.-|.+.+.||+|+||.||+|. ..+|+.||+|.+....... ....+.+|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347788999999999999997 5689999999985432110 012357899999999
Q ss_pred CCC--ceeeEeeEEecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEEeccCC
Q 001275 874 RHR--NLVRLEDFWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPP-IVHRDIKP 950 (1109)
Q Consensus 874 ~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-ivH~Dlk~ 950 (1109)
.+. .+.+++++ ...++||||++++++..+.... ..........++.|++.++++|| +.+ |+|||+||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKD---VEPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCccccccccc---CCcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCCh
Confidence 753 34444443 2358999999998887654221 12455667899999999999999 889 99999999
Q ss_pred CCeeeCCCCcEEEecccCCcccC
Q 001275 951 ENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 951 ~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
+||+++ ++.++++|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999987554
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.62 E-value=2.5e-15 Score=159.50 Aligned_cols=135 Identities=20% Similarity=0.337 Sum_probs=113.0
Q ss_pred ceeecccCeEEEEEEeCCCcEEEEEEeeeccccc-------ChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 825 HVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR-------GSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
+.||+|++|.||+|.. .+..+++|+........ ....+.+|++++..++|+++.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5699999999999987 57788899764322111 123577899999999999988877777777888999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
++|++|.+++.... + .+..++.+++.++.++| ..+++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986522 2 78899999999999999 89999999999999999 78999999998874
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.62 E-value=2.1e-15 Score=157.98 Aligned_cols=146 Identities=16% Similarity=0.140 Sum_probs=112.6
Q ss_pred HHHHHhhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecccc---------------------cChHHHHHHHHHHh
Q 001275 813 QVIEATENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHK---------------------RGSLSMKREIQTIG 871 (1109)
Q Consensus 813 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~E~~~l~ 871 (1109)
++......|...+.||+|+||.||+|...+|+.||||++...... .....+.+|+.++.
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 88 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALK 88 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHH
Confidence 334444458888999999999999998888999999987543210 01123677899999
Q ss_pred cCCCCc--eeeEeeEEecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccC
Q 001275 872 KIRHRN--LVRLEDFWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIK 949 (1109)
Q Consensus 872 ~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 949 (1109)
.+.|++ +.+.++ ....++||||+++++|.+.... .....++.++++++.++| ..+|+|||||
T Consensus 89 ~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~ 152 (198)
T cd05144 89 ALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAY---KHGIIHGDLS 152 (198)
T ss_pred HHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHH---HCCCCcCCCC
Confidence 987774 444443 2456899999999998765321 234578899999999999 8999999999
Q ss_pred CCCeeeCCCCcEEEecccCCcccCC
Q 001275 950 PENILLDSEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 950 ~~NIll~~~~~~kl~DfGla~~~~~ 974 (1109)
|+||++++++.++|+|||.+.....
T Consensus 153 p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 153 EFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred cccEEEcCCCcEEEEECCccccCCC
Confidence 9999999999999999999975543
No 448
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.60 E-value=2.5e-15 Score=157.84 Aligned_cols=131 Identities=21% Similarity=0.328 Sum_probs=106.2
Q ss_pred eeecccCeEEEEEEeCCCcEEEEEEeeeccccc-------ChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEec
Q 001275 826 VIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR-------GSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYM 898 (1109)
Q Consensus 826 ~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 898 (1109)
.||+|+||.||+|... +..+++|+........ ...++.+|++++..++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 3899999999999854 6788999864332111 1245778999999999887665555555667789999999
Q ss_pred cCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 899 ENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 899 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
+|++|.+++.... . .++.+++++++++| ..+++|||++|+||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~------~----~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGN------D----ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcH------H----HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999875421 0 78999999999999 89999999999999999 88999999999875
No 449
>PLN03150 hypothetical protein; Provisional
Probab=99.60 E-value=1.8e-15 Score=184.43 Aligned_cols=153 Identities=35% Similarity=0.568 Sum_probs=122.0
Q ss_pred hccCChhhHHHHHHHHHhccCCCCcccCCCCCCCCC---CceeeeEEecCC--C--CcEEEEEecccCCccccCCcccCC
Q 001275 22 SVNALNGDGVALLSLMRHWNSVPPLIISSWNSSDST---PCQWVGIECDDD--A--HNVVSFNLSSYGVSGQLGPEIGHL 94 (1109)
Q Consensus 22 ~~~~~~~~~~all~~~~~~~~~~~~~l~sW~~~~~~---~c~w~gv~C~~~--~--~~v~~l~l~~~~l~~~~~~~l~~l 94 (1109)
..++.+.|.+||+++|+++.. +.. .+|+++ +| +|.|.||+|+.. . .+|+.|+|+++++.|.+|+.+++|
T Consensus 366 ~~~t~~~~~~aL~~~k~~~~~-~~~--~~W~g~-~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 366 ESKTLLEEVSALQTLKSSLGL-PLR--FGWNGD-PCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred ccccCchHHHHHHHHHHhcCC-ccc--CCCCCC-CCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCC
Confidence 345677899999999999954 322 489763 21 127999999632 2 258889999999999999889999
Q ss_pred CCccEeecCCCcccccCCCCCCCCCCCcEeeccCccccCCCCccccccCccceeccccccccccCCcccccc-cccceec
Q 001275 95 SKLQTIDLSSNNFSGNIPPKLGNCSALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRI-LGLQYVF 173 (1109)
Q Consensus 95 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~ 173 (1109)
++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..+++|++|++|+|++|+++|.+|..+..+ .++..++
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~ 521 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFN 521 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEE
Confidence 999999999999998899889999999999999999998888888899999999999998888888877653 3455666
Q ss_pred ccccc
Q 001275 174 LNNNS 178 (1109)
Q Consensus 174 Ls~n~ 178 (1109)
+.+|.
T Consensus 522 ~~~N~ 526 (623)
T PLN03150 522 FTDNA 526 (623)
T ss_pred ecCCc
Confidence 66654
No 450
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.59 E-value=5.6e-15 Score=178.50 Aligned_cols=139 Identities=20% Similarity=0.298 Sum_probs=112.8
Q ss_pred hhCCCCCceeecccCeEEEEEEeCCCcEEEEEEeeecc-cc------cChHHHHHHHHHHhcCCCCceeeEeeEEecCCc
Q 001275 818 TENLNAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRG-HK------RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDC 890 (1109)
Q Consensus 818 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 890 (1109)
...|...+.||+|+||+||+|.+..... ++|+...+. .. ....++.+|++++.+++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~-v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDA-VIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccc-eeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 3455678899999999999998765444 444322111 11 113468899999999999999988888877778
Q ss_pred eeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 891 GIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 891 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
.++||||+++++|.+++. ....++.+++++++||| +.+|+|||+||+||++ +++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 899999999999999885 34678999999999999 8999999999999999 67899999999997
Q ss_pred cc
Q 001275 971 LL 972 (1109)
Q Consensus 971 ~~ 972 (1109)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.58 E-value=3.8e-16 Score=173.66 Aligned_cols=124 Identities=29% Similarity=0.452 Sum_probs=109.8
Q ss_pred ceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 890 CGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 890 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
..|+.|++++..+|.+|+...+.....++.....++.|++.|++| ++.+|||+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 568999999999999999876666678899999999999999998 57899999999999999999999999998
Q ss_pred cccCCCC----CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHh
Q 001275 970 KLLDKSP----ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELIT 1019 (1109)
Q Consensus 970 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ellt 1019 (1109)
....... .....+...||..||+||.+.+..|+.|+||||+|++++|++.
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 8765544 2234455689999999999999999999999999999999997
No 452
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.56 E-value=6.3e-16 Score=171.23 Aligned_cols=173 Identities=29% Similarity=0.452 Sum_probs=118.1
Q ss_pred CCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEec
Q 001275 503 VLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVS 582 (1109)
Q Consensus 503 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls 582 (1109)
--...||+.|++. ++|..+..+..|+.+.|.+|.+. .+|..+++|..|++|||+.|+++ .+|..++.|+ |++|-++
T Consensus 76 dt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~s 151 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVS 151 (722)
T ss_pred chhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEe
Confidence 3456677777776 66777777777777777777776 56777777777777777777777 6676666665 6777777
Q ss_pred CccccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCCchhhhhhhhhhcccccccccc
Q 001275 583 FNLLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGLTGR 662 (1109)
Q Consensus 583 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ 662 (1109)
+|+++ .+|..++....|..||.+.|.+. .+|.-++++.+|+.|.+..|++. .+|++++.|+ | ..||+|+|+++ .
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-L-i~lDfScNkis-~ 225 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-L-IRLDFSCNKIS-Y 225 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-e-eeeecccCcee-e
Confidence 77776 66777776667777777777766 56666666777777777777666 5666666554 2 24666777666 6
Q ss_pred cCcchhhcccCCeEEccCCcccc
Q 001275 663 IPSDLEKLSKLEQLDISSNNLTG 685 (1109)
Q Consensus 663 ip~~l~~l~~L~~L~Ls~N~l~g 685 (1109)
||-.|.+|+.|++|-|.+|.|+.
T Consensus 226 iPv~fr~m~~Lq~l~LenNPLqS 248 (722)
T KOG0532|consen 226 LPVDFRKMRHLQVLQLENNPLQS 248 (722)
T ss_pred cchhhhhhhhheeeeeccCCCCC
Confidence 66666666666666666666663
No 453
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.56 E-value=5.3e-16 Score=171.81 Aligned_cols=181 Identities=28% Similarity=0.467 Sum_probs=165.3
Q ss_pred ccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEecCccccCCCCccccccccccee
Q 001275 524 NSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNGSIPSSLRSWKSLSIL 603 (1109)
Q Consensus 524 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 603 (1109)
+++--...||+.|++. ++|.++..+..|+.|.|.+|.|. .+|..++++..|++|||+.|+++ .+|..++.++ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 4556677899999999 78999999999999999999999 89999999999999999999999 8999998886 8999
Q ss_pred ccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCCchhhhhhhhhhcccccccccccCcchhhcccCCeEEccCCcc
Q 001275 604 KLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGLTGRIPSDLEKLSKLEQLDISSNNL 683 (1109)
Q Consensus 604 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l 683 (1109)
.+++|+++ .+|..++.+..|..||.+.|++. .+|..++.+.+|+ .|++.+|++. .+|+++..| .|..||+|.|++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr-~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLR-DLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHH-HHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 99999999 89999999999999999999998 8999999999995 7999999999 799999955 589999999999
Q ss_pred cccCCC-CCccccceEEeeeccccccccchhhh
Q 001275 684 TGTLSP-LSNIHSLVEVNVSYNLFTGPVPETLM 715 (1109)
Q Consensus 684 ~g~~~~-l~~~~~l~~l~~~~n~l~g~~p~~~~ 715 (1109)
+ .||- +..|+.|++|-|.+|+|.. .|.++.
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLqS-PPAqIC 254 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQS-PPAQIC 254 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCCC-ChHHHH
Confidence 9 6665 9999999999999999995 465543
No 454
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.55 E-value=2.3e-15 Score=178.38 Aligned_cols=165 Identities=30% Similarity=0.420 Sum_probs=117.8
Q ss_pred hCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
.+|+.++.|..|+||.||..+++. .+.+|.| +.+.. .+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~------lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQN------LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccc------hhhhc--cccccCCccee------------------
Confidence 468889999999999999997764 4566663 31110 01110 22222233322
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCC-
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSP- 976 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~- 976 (1109)
|+-.+.++..+. +... .+.+++|+| +.+|||||+||+|.+|+.-|++|++|||++++--...
T Consensus 136 ---gDc~tllk~~g~---lPvd--------mvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~a 198 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP---LPVD--------MVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLA 198 (1205)
T ss_pred ---chhhhhcccCCC---Ccch--------hhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhcc
Confidence 344444444332 2222 267899999 9999999999999999999999999999987532110
Q ss_pred ------------CCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCC
Q 001275 977 ------------ASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPS 1027 (1109)
Q Consensus 977 ------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~ 1027 (1109)
........+||+.|+|||++....|...+|.|++|+|+||.+.|+.||+..
T Consensus 199 tnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGd 261 (1205)
T KOG0606|consen 199 TNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD 261 (1205)
T ss_pred chhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCC
Confidence 001122358999999999999999999999999999999999999999765
No 455
>PLN03150 hypothetical protein; Provisional
Probab=99.52 E-value=8.9e-15 Score=178.36 Aligned_cols=111 Identities=34% Similarity=0.520 Sum_probs=76.5
Q ss_pred hhhhhcccCcCCCCCCCCchhhhhhhhhhcccccccccccCcchhhcccCCeEEccCCcccccCCC-CCccccceEEeee
Q 001275 624 LLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGLTGRIPSDLEKLSKLEQLDISSNNLTGTLSP-LSNIHSLVEVNVS 702 (1109)
Q Consensus 624 L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~~~-l~~~~~l~~l~~~ 702 (1109)
++.|+|++|.+.|.+|..++.+++| ..|+|++|+|+|.+|..++++++|+.|||++|+|+|.+|. ++.+++|+.|+++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L-~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHL-QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCC-CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 4556666666666677667766666 3577777777777777777777777777777777777776 7777777777777
Q ss_pred ccccccccchhhhhc-cCCCCCCCCCCCcccccc
Q 001275 703 YNLFTGPVPETLMNL-LGPSPSSFSGNPSLCVKC 735 (1109)
Q Consensus 703 ~n~l~g~~p~~~~~~-~~~~~~~~~gn~~~c~~~ 735 (1109)
+|.|+|.+|..+... .......+.||+++||.+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p 532 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIP 532 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCC
Confidence 777777777665432 112234578999999844
No 456
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.50 E-value=8.3e-14 Score=144.74 Aligned_cols=138 Identities=19% Similarity=0.209 Sum_probs=98.8
Q ss_pred CceeecccCeEEEEEEeCCCcEEEEEEeeeccccc-ChHH----------------------HHHHHHHHhcCCCCc--e
Q 001275 824 KHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR-GSLS----------------------MKREIQTIGKIRHRN--L 878 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~----------------------~~~E~~~l~~l~h~n--i 878 (1109)
.+.||+|+||+||+|...+++.||||++....... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 46799999999999988889999999885432111 1111 135666666664432 4
Q ss_pred eeEeeEEecCCceeEEEEeccCCCHHH-HHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEeccCCCCeeeC
Q 001275 879 VRLEDFWLRKDCGIIMYRYMENGSLRD-VLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCD-PPIVHRDIKPENILLD 956 (1109)
Q Consensus 879 v~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~-~~ivH~Dlk~~NIll~ 956 (1109)
.+.+++ ...++||||++++++.. .+.... .. .....++.+++.++.++| . .+|+|||+||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE
Confidence 444433 24689999999954321 111111 11 557789999999999999 7 8999999999999999
Q ss_pred CCCcEEEecccCCcccCC
Q 001275 957 SEMEPHISDFGIAKLLDK 974 (1109)
Q Consensus 957 ~~~~~kl~DfGla~~~~~ 974 (1109)
++.++++|||.+.....
T Consensus 150 -~~~~~liDfg~a~~~~~ 166 (187)
T cd05119 150 -DGKVYIIDVPQAVEIDH 166 (187)
T ss_pred -CCcEEEEECcccccccC
Confidence 89999999999975543
No 457
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.48 E-value=1.8e-13 Score=136.71 Aligned_cols=135 Identities=20% Similarity=0.201 Sum_probs=112.3
Q ss_pred CCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCC--CceeeEeeEEecCCceeEEEEeccC
Q 001275 823 AKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRH--RNLVRLEDFWLRKDCGIIMYRYMEN 900 (1109)
Q Consensus 823 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~ 900 (1109)
+.+.+|+|.++.||++...+ ..+++|....... ...+.+|+.++..++| .++++++++....+..++++||+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 35679999999999998865 7789998743322 4578899999999976 5899999888877889999999998
Q ss_pred CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcc
Q 001275 901 GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKL 971 (1109)
Q Consensus 901 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 971 (1109)
+.+..+ +......++.+++++++++|.....+++|+|++|+||++++.+.++++|||.++.
T Consensus 78 ~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 78 ETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred eecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 766543 4566778899999999999944335799999999999999989999999998874
No 458
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.45 E-value=5.8e-13 Score=142.78 Aligned_cols=137 Identities=18% Similarity=0.234 Sum_probs=106.0
Q ss_pred Cceee-cccCeEEEEEEeCCCcEEEEEEeeecc------------cccChHHHHHHHHHHhcCCCCce--eeEeeEEecC
Q 001275 824 KHVIG-RGAHGIVYKASLGPNAVFAVKKLAFRG------------HKRGSLSMKREIQTIGKIRHRNL--VRLEDFWLRK 888 (1109)
Q Consensus 824 ~~~lG-~G~~g~Vy~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 888 (1109)
..++| .|+.|+||.+... +..+++|++.... .......+.+|++++.+++|+++ ++.+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 45688 8999999999876 6778999874321 01223567899999999998774 6777764432
Q ss_pred C----ceeEEEEeccC-CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEE
Q 001275 889 D----CGIIMYRYMEN-GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHI 963 (1109)
Q Consensus 889 ~----~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 963 (1109)
. ..++|+||+++ .+|.+++... .++.. .+.++++++.+|| +.+|+||||||.|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEE
Confidence 2 22599999997 6999988642 24433 3568899999999 999999999999999999999999
Q ss_pred ecccCCccc
Q 001275 964 SDFGIAKLL 972 (1109)
Q Consensus 964 ~DfGla~~~ 972 (1109)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999988753
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=1.4e-13 Score=160.92 Aligned_cols=198 Identities=36% Similarity=0.531 Sum_probs=122.4
Q ss_pred eEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhccc-ccceeecccccccccCCccccCCCCccEEEecCc
Q 001275 506 HLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLV-SLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFN 584 (1109)
Q Consensus 506 ~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N 584 (1109)
.++++.|.+. ..+..+..++.++.|++.+|.++ .+|...+.+. +|+.|++++|++. .+|..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 3555555553 22333444455666666666665 3455555553 6666666666665 45555566666666666666
Q ss_pred cccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCCchhhhhhhhhhcccccccccccC
Q 001275 585 LLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPSIGALQDLSYALNLSKNGLTGRIP 664 (1109)
Q Consensus 585 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ip 664 (1109)
+++ .+|...+..+.|+.|++++|+++ .+|..+.....|++|++++|++. .+|..+..+..+. .|.+++|++. .+|
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~-~l~l~~n~~~-~~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLS-GLELSNNKLE-DLP 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhccccc-ccccCCceee-ecc
Confidence 666 45555555666666666666666 56665555556777777777543 4556666666663 4667777766 446
Q ss_pred cchhhcccCCeEEccCCcccccCCCCCccccceEEeeeccccccccch
Q 001275 665 SDLEKLSKLEQLDISSNNLTGTLSPLSNIHSLVEVNVSYNLFTGPVPE 712 (1109)
Q Consensus 665 ~~l~~l~~L~~L~Ls~N~l~g~~~~l~~~~~l~~l~~~~n~l~g~~p~ 712 (1109)
..+++++.+++|++++|.++ .++.++.+.+|+.+++++|.++..+|.
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~-~i~~~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQIS-SISSLGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred chhccccccceecccccccc-ccccccccCccCEEeccCccccccchh
Confidence 67777777777777777777 455577777777777777777766664
No 460
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.43 E-value=2.7e-14 Score=171.29 Aligned_cols=258 Identities=22% Similarity=0.284 Sum_probs=189.4
Q ss_pred hCCCCCceeecccCeEEEEEEe--CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcCC-CCceeeEeeEEecCCceeEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASL--GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKIR-HRNLVRLEDFWLRKDCGIIM 894 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv 894 (1109)
..|...+.||+|+|+.|-.... .....+|+|.+.... ..........|..+-+.+. |+|++++++...+.+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 4567778899999999998855 334556666654332 2223344556888888886 99999999999999999999
Q ss_pred EEeccCCCHHHHH-hccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC-cEEEecccCCccc
Q 001275 895 YRYMENGSLRDVL-HSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM-EPHISDFGIAKLL 972 (1109)
Q Consensus 895 ~e~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfGla~~~ 972 (1109)
.+|.++|++.+.+ +... ...+....-..+.|+..++.|+|. ..+++|||+||+|.+++..+ ..+++|||+|..+
T Consensus 100 ~~~s~g~~~f~~i~~~~~--~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDS--TGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred cCcccccccccccccCCc--cCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 9999999999887 4322 124555667889999999999994 56899999999999999999 9999999999987
Q ss_pred CC-CCCCceeeeccc-CcccccccccccCCC-CccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc
Q 001275 973 DK-SPASTTSISVVG-TIGYIAPENAFTTAK-SKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN 1049 (1109)
Q Consensus 973 ~~-~~~~~~~~~~~g-t~~y~aPE~~~~~~~-~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1109)
.. ..........+| ++.|+|||...+..+ ....|+||.|+++.-+++|..|++...........|..... ..
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~----~~- 250 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKG----RF- 250 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccc----cc-
Confidence 76 455555556778 999999998888544 78899999999999999999998755433333222221110 00
Q ss_pred cccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1050 DIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1050 ~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
..... ........++..+++..+|..|.+.+++...
T Consensus 251 --------~~~~~---~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 251 --------TQLPW---NSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred --------ccCcc---ccCChhhhhcccccccCCchhcccccccccc
Confidence 00001 1111223445568888999999998887654
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.42 E-value=2.3e-13 Score=159.14 Aligned_cols=175 Identities=35% Similarity=0.475 Sum_probs=87.7
Q ss_pred CCCceEEecCCcccccCCCCcccCc-cceEEECCCcccccCCCcccCCCCccchhhccCcccCCCCCCCCCCCCCceEEe
Q 001275 431 SSLMQLDFINNSFTGEIPPNLCFGK-QLRVLNMGQNQFHGPIPSLLGSCPTLWRVILKQNQLTGALPEFSKNPVLSHLDV 509 (1109)
Q Consensus 431 ~~L~~L~ls~N~l~~~~p~~~~~~~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~L~~L~L 509 (1109)
+.++.|++.+|.++ .+|+...... +|+.|++++|++. .+|..++.+++|+.|++++|+++...+.....+.|+.|++
T Consensus 116 ~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 116 TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKLLSNLSNLNNLDL 193 (394)
T ss_pred cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhhhhhhhhhhhhhhhheec
Confidence 44555555555554 4444444442 5555555555555 3334445555555555555555533333335555555555
Q ss_pred ecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEEecCccccCC
Q 001275 510 SRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNGS 589 (1109)
Q Consensus 510 s~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~ 589 (1109)
++|+++ .+|..+.....|++|++++|++. ..+..+.++.++..|.+++|++. .++..++.+++++.|++++|+++ .
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~-~ 269 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQIS-S 269 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccc-c
Confidence 555555 44544444444555555555322 23445555555555555555555 23444555555555555555555 2
Q ss_pred CCcccccccccceeccccccccC
Q 001275 590 IPSSLRSWKSLSILKLSENHFTG 612 (1109)
Q Consensus 590 ~p~~~~~l~~L~~L~L~~N~l~~ 612 (1109)
++. ++.+.+++.|++++|.++.
T Consensus 270 i~~-~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 270 ISS-LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred ccc-ccccCccCEEeccCccccc
Confidence 332 4445555555555555543
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=8.5e-13 Score=137.43 Aligned_cols=216 Identities=23% Similarity=0.332 Sum_probs=147.2
Q ss_pred HHHHHHHhcCCCCceeeEeeEEecCC-----ceeEEEEeccCCCHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHhhc
Q 001275 864 KREIQTIGKIRHRNLVRLEDFWLRKD-----CGIIMYRYMENGSLRDVLHSITP-PPTLEWNVRYKIALGAAHALAYLHY 937 (1109)
Q Consensus 864 ~~E~~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~~L~~LH~ 937 (1109)
..-+..+-++.|-|+|++..||.+.. +..+++|||+.|++..++++.+. ...+......++..||..||.|||
T Consensus 115 ~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLh- 193 (458)
T KOG1266|consen 115 RAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLH- 193 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhh-
Confidence 33455566678999999999987643 46899999999999999987432 334666777899999999999999
Q ss_pred CCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC--CCCCceeeecccCcccccccccccCCCCccCcchhhHHHHH
Q 001275 938 DCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK--SPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLL 1015 (1109)
Q Consensus 938 ~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~ 1015 (1109)
.+++.|+|+++.-+-|++..++-+|++----...... ...........+-++|.|||+-.....+.++|||+||+...
T Consensus 194 s~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 194 SCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCAL 273 (458)
T ss_pred ccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHH
Confidence 4589999999999999999999888753211111000 00011112235678999999888788888999999999999
Q ss_pred HHHhCCCCCCCCccccccHHHHHHHhhcCccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHH
Q 001275 1016 ELITRKKALDPSYKERTDIVGWVRSVWSDTEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVR 1095 (1109)
Q Consensus 1016 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~ 1095 (1109)
||..+...-.........-.......+ ..-++ .-...+..|++.+|..||+|++++.
T Consensus 274 emailEiq~tnseS~~~~ee~ia~~i~-------~len~----------------lqr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 274 EMAILEIQSTNSESKVEVEENIANVII-------GLENG----------------LQRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HHHHheeccCCCcceeehhhhhhhhee-------eccCc----------------cccCcCcccccCCCCCCcchhhhhc
Confidence 999887532111000000000000000 00000 0012445899999999999999999
Q ss_pred HhhhCCCC
Q 001275 1096 QLVDASVP 1103 (1109)
Q Consensus 1096 ~L~~~~~~ 1103 (1109)
|...+.+.
T Consensus 331 HpllfeVh 338 (458)
T KOG1266|consen 331 HPLLFEVH 338 (458)
T ss_pred Cceeeecc
Confidence 98776554
No 463
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.29 E-value=1.3e-11 Score=143.91 Aligned_cols=142 Identities=22% Similarity=0.266 Sum_probs=100.8
Q ss_pred CceeecccCeEEEEEEeCCCcEEEEEEeeeccccc---------------------------------------ChHHHH
Q 001275 824 KHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKR---------------------------------------GSLSMK 864 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------------------------------------~~~~~~ 864 (1109)
.+.||+|++|.||+|+..+|+.||||+......+. .+-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 46799999999999999999999999874321000 001345
Q ss_pred HHHHHHhcCC-----CCceeeEeeEEecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHH-HHHHhhcC
Q 001275 865 REIQTIGKIR-----HRNLVRLEDFWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAH-ALAYLHYD 938 (1109)
Q Consensus 865 ~E~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~L~~LH~~ 938 (1109)
+|++.+.+++ ++++.-..-++......++||||++|+++.++...... ..+ +.+++..+++ .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~~---~~~ia~~~~~~~l~ql~-- 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GLD---RKALAENLARSFLNQVL-- 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CCC---HHHHHHHHHHHHHHHHH--
Confidence 5666666652 33333222222334567999999999999887653211 122 3456666665 467888
Q ss_pred CCCCeEEeccCCCCeeeCCCCcEEEecccCCcccC
Q 001275 939 CDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 939 ~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
..+++|+|++|.||+++.++.++++|||++..+.
T Consensus 275 -~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 -RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred -hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8899999999999999999999999999998664
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.17 E-value=3.3e-11 Score=137.60 Aligned_cols=250 Identities=25% Similarity=0.250 Sum_probs=177.3
Q ss_pred CCCCCceeec--ccCeEEEEEEe---CCCcEEEEEEeeecc-cccChHHHHHHHHHHhcC-CCCceeeEeeEEecCCcee
Q 001275 820 NLNAKHVIGR--GAHGIVYKASL---GPNAVFAVKKLAFRG-HKRGSLSMKREIQTIGKI-RHRNLVRLEDFWLRKDCGI 892 (1109)
Q Consensus 820 ~~~~~~~lG~--G~~g~Vy~~~~---~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 892 (1109)
.|...+.+|. |.+|.||.+.. .++..+|+|+-.... ......+-.+|+..-+.+ .|++.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556677999 99999999965 467889999743222 223334456788887777 5999999999999999999
Q ss_pred EEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHH----HHHHhhcCCCCCeEEeccCCCCeeeCCC-CcEEEeccc
Q 001275 893 IMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAH----ALAYLHYDCDPPIVHRDIKPENILLDSE-MEPHISDFG 967 (1109)
Q Consensus 893 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfG 967 (1109)
+-+|++. .++.++.+.... .++....+.+..+..+ |+.++| ...++|-|+||.||+...+ ..++++|||
T Consensus 195 iqtE~~~-~sl~~~~~~~~~--~~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCN--FLPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeecccc-chhHHhhhcccc--cCCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCcc
Confidence 9999986 688888876432 2445555666666666 999999 9999999999999999999 889999999
Q ss_pred CCcccCCCCCCce---eeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcC
Q 001275 968 IAKLLDKSPASTT---SISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSD 1044 (1109)
Q Consensus 968 la~~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 1044 (1109)
+...+........ .....|...|++||.. ...++.++|+|++|.++.+..++-......+... |..
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~----------W~~ 337 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNSS----------WSQ 337 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCCC----------ccc
Confidence 9988766542221 1223677889999954 5677899999999999999999987764432110 111
Q ss_pred ccccccccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHH
Q 001275 1045 TEEINDIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQ 1096 (1109)
Q Consensus 1045 ~~~~~~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~ 1096 (1109)
.+. ...+. +... .-..++...+..|++.+|..|++.+++..+
T Consensus 338 ~r~---~~ip~---e~~~----~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 338 LRQ---GYIPL---EFCE----GGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ccc---ccCch---hhhc----CcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 111 00100 0000 001122225668999999999998887653
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.12 E-value=1e-11 Score=127.57 Aligned_cols=110 Identities=25% Similarity=0.265 Sum_probs=63.7
Q ss_pred CCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCccEEE
Q 001275 501 NPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLEVFD 580 (1109)
Q Consensus 501 ~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 580 (1109)
.|.++.|++|+|.|+ .+. .+..+.+|+.||||+|.++ .+-.+-..|-+.++|+|++|.|+. -+.+.+|-+|..||
T Consensus 306 ~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE~--LSGL~KLYSLvnLD 380 (490)
T KOG1259|consen 306 APKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIET--LSGLRKLYSLVNLD 380 (490)
T ss_pred ccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHhh--hhhhHhhhhheecc
Confidence 344555555555554 222 2455556666666666665 334444555566666666666552 12355566666777
Q ss_pred ecCccccCCC-CcccccccccceeccccccccCCCcc
Q 001275 581 VSFNLLNGSI-PSSLRSWKSLSILKLSENHFTGGIPT 616 (1109)
Q Consensus 581 ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~ 616 (1109)
+++|+|...- -..|++++.|+.+.|.+|.+.+ +|+
T Consensus 381 l~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~-~vd 416 (490)
T KOG1259|consen 381 LSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG-SVD 416 (490)
T ss_pred ccccchhhHHHhcccccccHHHHHhhcCCCccc-cch
Confidence 7777765211 1567788888888888888873 444
No 466
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.11 E-value=3.2e-12 Score=134.96 Aligned_cols=249 Identities=22% Similarity=0.284 Sum_probs=143.9
Q ss_pred CcccCCCCccEeecCCCcccc----cCCCCCCCCCCCcEeeccCcc---ccCCCCc-------cccccCccceecccccc
Q 001275 89 PEIGHLSKLQTIDLSSNNFSG----NIPPKLGNCSALEYLDLSTNG---FTGDIPD-------NFENLQNLQYLNLYGNL 154 (1109)
Q Consensus 89 ~~l~~l~~L~~L~L~~n~l~~----~~p~~l~~l~~L~~L~Ls~n~---l~~~~p~-------~l~~L~~L~~L~L~~n~ 154 (1109)
+.+..+..+++++|++|.|.. .+.+.+.+.++|++.++|+-- ....+|+ .+...++|++||||+|.
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 334556666677777766653 234445556667776666521 2223343 23455678888888887
Q ss_pred ccccCCccc----ccccccceecccccccccccccccCCCcccceeecccccCCCCcccccccccCccEEEeccccccCc
Q 001275 155 LDGEIPEPL----FRILGLQYVFLNNNSLSGSIPRNVGDLKEVEALWLFSNRLSGTIPESIGNCYRLQELYLNENKLMGF 230 (1109)
Q Consensus 155 l~~~~p~~l----~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~ 230 (1109)
+....+..+ ..+..|++|.|.||.+...--..++. .|.+|. .|. -++.-++|+++..++|++...
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~~~Lrv~i~~rNrlen~ 172 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASKPKLRVFICGRNRLENG 172 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCCcceEEEEeeccccccc
Confidence 765444443 34456778888777765222222211 122221 111 122334566666666666533
Q ss_pred C----chhcccccccccccccCcccCC----cccccccCCCCcchhccccccccCC----CCcccccccCCcEEEeecCC
Q 001275 231 L----PESLSNLENLVYLDVGDNNLEG----RINFGSEKCKNLTFLDLSYNRFSGG----ISPNLGNCSSLTHLDIVGSK 298 (1109)
Q Consensus 231 ~----~~~l~~l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L~~n~ 298 (1109)
. ...|...+.|+.+.++.|.|.. .....+..+++|++|||.+|-|+.. +...+..+++|+.|++++|.
T Consensus 173 ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcl 252 (382)
T KOG1909|consen 173 GATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCL 252 (382)
T ss_pred cHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccc
Confidence 2 2345555666666666666642 1234456677777777777777632 33455667778888888887
Q ss_pred CCCcCCccc-----cccccccEEEcCCCCCCC----CCCCccccccccceeeccCcccC
Q 001275 299 LTGSIPSSF-----GLLARLSSLDLSENQLSG----KIPPELGKCKYLTVLHLYANQLE 348 (1109)
Q Consensus 299 l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~N~l~ 348 (1109)
+......+| ...++|++|.+.+|.++. .+...+...+.|+.|+|++|.+.
T Consensus 253 l~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 253 LENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred cccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 775443332 235788888888888863 12334455788888888888883
No 467
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.11 E-value=2.5e-11 Score=142.03 Aligned_cols=221 Identities=31% Similarity=0.339 Sum_probs=158.3
Q ss_pred CCCccchhhccCcccCCCCCCCCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceee
Q 001275 477 SCPTLWRVILKQNQLTGALPEFSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLN 556 (1109)
Q Consensus 477 ~l~~L~~l~l~~N~l~~~~~~~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 556 (1109)
.+..+..+.++.|.+......+..+.+|+.|++.+|+|. .+...+..+.+|++|++|+|+|+.. ..+..++.|+.|+
T Consensus 70 ~l~~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~ 146 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELN 146 (414)
T ss_pred HhHhHHhhccchhhhhhhhcccccccceeeeeccccchh-hcccchhhhhcchheeccccccccc--cchhhccchhhhe
Confidence 344555555666666643444777788888999999988 3444477788899999999998865 3566777799999
Q ss_pred cccccccccCCccccCCCCccEEEecCccccCCCCcc-cccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCC
Q 001275 557 ISLNHVEGSLPSQLSKCKNLEVFDVSFNLLNGSIPSS-LRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLG 635 (1109)
Q Consensus 557 L~~N~l~~~~p~~l~~l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 635 (1109)
+++|.|+. ...+..+.+|+.+++++|+++..-+ . ...+.+++.+++.+|.+. ....+..+..+..+++..|+++
T Consensus 147 l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~ 221 (414)
T KOG0531|consen 147 LSGNLISD--ISGLESLKSLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKIS 221 (414)
T ss_pred eccCcchh--ccCCccchhhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchh--cccchHHHHHHHHhhcccccce
Confidence 99999883 2345558899999999999984433 2 577888999999999887 2345566777777899999887
Q ss_pred CCCCCCchhhhhhhhhhcccccccccccCcchhhcccCCeEEccCCcccccCCCCCccccceEEeeecccccc
Q 001275 636 GEIPPSIGALQDLSYALNLSKNGLTGRIPSDLEKLSKLEQLDISSNNLTGTLSPLSNIHSLVEVNVSYNLFTG 708 (1109)
Q Consensus 636 g~ip~~~~~l~~l~~~L~L~~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~~~~l~~~~~l~~l~~~~n~l~g 708 (1109)
-.-+-....+.++ ..+++++|.+. .+|..+..+..+..||+++|+++. +..+.....+..+..++|.+..
T Consensus 222 ~~~~l~~~~~~~L-~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~-~~~~~~~~~~~~~~~~~~~~~~ 291 (414)
T KOG0531|consen 222 KLEGLNELVMLHL-RELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISN-LEGLERLPKLSELWLNDNKLAL 291 (414)
T ss_pred eccCcccchhHHH-HHHhcccCccc-cccccccccccccccchhhccccc-cccccccchHHHhccCcchhcc
Confidence 3222111111124 46889999988 676788889999999999999883 3335555666777777777653
No 468
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.10 E-value=2e-10 Score=117.27 Aligned_cols=127 Identities=19% Similarity=0.243 Sum_probs=94.4
Q ss_pred CceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCcee-eEeeEEecCCceeEEEEeccCCC
Q 001275 824 KHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLV-RLEDFWLRKDCGIIMYRYMENGS 902 (1109)
Q Consensus 824 ~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gs 902 (1109)
.+.++.|.++.||+++.. +..|++|....... ....+.+|+.+++.+.+.+++ +++.+. .+..++||||++|.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence 356899999999999876 77899997643221 233567899999988655544 444433 334689999999987
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-----eEEeccCCCCeeeCCCCcEEEecccCCc
Q 001275 903 LRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPP-----IVHRDIKPENILLDSEMEPHISDFGIAK 970 (1109)
Q Consensus 903 L~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlk~~NIll~~~~~~kl~DfGla~ 970 (1109)
+.+. . . ....++.+++++++.|| ..+ ++|||++|.||+++ ++.++++|||.+.
T Consensus 78 l~~~----~----~---~~~~~~~~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 78 LLTE----D----F---SDPENLEKIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cccc----c----c---cCHHHHHHHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 7543 0 0 11245678999999999 555 59999999999999 6789999999876
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.07 E-value=4.4e-11 Score=122.87 Aligned_cols=136 Identities=28% Similarity=0.261 Sum_probs=110.2
Q ss_pred CCCCCCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccccCCCCcc
Q 001275 498 FSKNPVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQLSKCKNLE 577 (1109)
Q Consensus 498 ~~~~~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 577 (1109)
+.....|++||||+|.|+ .+.+++.-.+.++.|++|+|.|... +.+..|.+|+.||||+|.++ .+-.+-.+|-+.+
T Consensus 280 ~dTWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIK 355 (490)
T KOG1259|consen 280 ADTWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIK 355 (490)
T ss_pred cchHhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEe
Confidence 334456889999999998 7888888899999999999999832 44888899999999999988 6666667788999
Q ss_pred EEEecCccccCCCCcccccccccceeccccccccCC-CcchhhhhhhhhhhhcccCcCCCCCCC
Q 001275 578 VFDVSFNLLNGSIPSSLRSWKSLSILKLSENHFTGG-IPTFISELEKLLELQLGGNQLGGEIPP 640 (1109)
Q Consensus 578 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~g~ip~ 640 (1109)
.|.|+.|.|.. -+.++.+-+|..||+++|++... -...|++|+-|+.+.|.+|.+. .+|+
T Consensus 356 tL~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~-~~vd 416 (490)
T KOG1259|consen 356 TLKLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLA-GSVD 416 (490)
T ss_pred eeehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcc-ccch
Confidence 99999999863 24577788899999999999732 2346888999999999999998 4554
No 470
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.06 E-value=1.4e-10 Score=136.52 Aligned_cols=147 Identities=17% Similarity=0.207 Sum_probs=94.5
Q ss_pred hCCCCCceeecccCeEEEEEEeCC-CcEEEEEEeeecccc---------------------c------------------
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLGP-NAVFAVKKLAFRGHK---------------------R------------------ 858 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---------------------~------------------ 858 (1109)
..|+. +.+|+|++|.||+|+..+ |+.||||+......+ .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 45665 789999999999999887 999999998533100 0
Q ss_pred ChHHHHHHHHHHhcCC----CCceeeEeeEEe-cCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHH-HH
Q 001275 859 GSLSMKREIQTIGKIR----HRNLVRLEDFWL-RKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAH-AL 932 (1109)
Q Consensus 859 ~~~~~~~E~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-~L 932 (1109)
.+-++.+|+..+.+++ +...+.+-.++. .....++||||++|+.+.++-.-... ..+.+ .++...++ -+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~--g~d~~---~la~~~v~~~~ 273 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA--GTDMK---LLAERGVEVFF 273 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc--CCCHH---HHHHHHHHHHH
Confidence 0112445555555552 333344333332 24567899999999999875321111 12211 12221111 12
Q ss_pred HHhhcCCCCCeEEeccCCCCeeeCCCC----cEEEecccCCcccCC
Q 001275 933 AYLHYDCDPPIVHRDIKPENILLDSEM----EPHISDFGIAKLLDK 974 (1109)
Q Consensus 933 ~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~DfGla~~~~~ 974 (1109)
..+. ..+++|+|+||.||+++.++ ++++.|||++..+..
T Consensus 274 ~Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 274 TQVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 2333 56899999999999999888 999999999887754
No 471
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=2.2e-11 Score=142.58 Aligned_cols=106 Identities=25% Similarity=0.334 Sum_probs=49.4
Q ss_pred CCCCCcEeeccCccccCCCCccccccCccceeccccccccccCCcccccccccceecccccccccccccccCCCccccee
Q 001275 117 NCSALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYVFLNNNSLSGSIPRNVGDLKEVEAL 196 (1109)
Q Consensus 117 ~l~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~L~~L 196 (1109)
.+..++.+++..|.+.. +-..+..+++|+.|++.+|+|. .+...+..+.+|++|++++|+|+... .+..++.|+.|
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L 145 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIE-KIENLLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKEL 145 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchh-hcccchhhhhcchheecccccccccc--chhhccchhhh
Confidence 44555556666666652 3334555666666666666665 22222444555555555555554221 13333334444
Q ss_pred ecccccCCCCcccccccccCccEEEecccccc
Q 001275 197 WLFSNRLSGTIPESIGNCYRLQELYLNENKLM 228 (1109)
Q Consensus 197 ~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 228 (1109)
++++|.++.. ..+..+..|+.+++++|+++
T Consensus 146 ~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~ 175 (414)
T KOG0531|consen 146 NLSGNLISDI--SGLESLKSLKLLDLSYNRIV 175 (414)
T ss_pred eeccCcchhc--cCCccchhhhcccCCcchhh
Confidence 4444444321 22233344444444444443
No 472
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.05 E-value=2.9e-12 Score=135.25 Aligned_cols=254 Identities=24% Similarity=0.267 Sum_probs=138.4
Q ss_pred CCCCCCCCcEeeccCccccC----CCCccccccCccceeccccc---cccccCCcccccccccceecccccccccccccc
Q 001275 114 KLGNCSALEYLDLSTNGFTG----DIPDNFENLQNLQYLNLYGN---LLDGEIPEPLFRILGLQYVFLNNNSLSGSIPRN 186 (1109)
Q Consensus 114 ~l~~l~~L~~L~Ls~n~l~~----~~p~~l~~L~~L~~L~L~~n---~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~ 186 (1109)
.+..+..+++|+||+|.+.. .+...+.+.++|+.-++++- ++..++|+.+.- +.+.
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~-----------------l~~a 87 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKM-----------------LSKA 87 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHH-----------------HHHH
Confidence 45567888888888888863 24455667778888777763 222234433211 1223
Q ss_pred cCCCcccceeecccccCCCCcccc----cccccCccEEEeccccccCcCchhcccccccccccccCcccCCcccccccCC
Q 001275 187 VGDLKEVEALWLFSNRLSGTIPES----IGNCYRLQELYLNENKLMGFLPESLSNLENLVYLDVGDNNLEGRINFGSEKC 262 (1109)
Q Consensus 187 l~~l~~L~~L~L~~N~l~~~~p~~----l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 262 (1109)
+-..++|++|+||+|.+....+.. +.++..|++|+|.+|.+.-.....++. .|..|. .|+ ....-
T Consensus 88 L~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~k-------k~~~~ 156 (382)
T KOG1909|consen 88 LLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VNK-------KAASK 156 (382)
T ss_pred HhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HHh-------ccCCC
Confidence 344456777777777766544443 345677888888888775332222221 011111 111 11123
Q ss_pred CCcchhccccccccCCC----CcccccccCCcEEEeecCCCCCc----CCccccccccccEEEcCCCCCCCC----CCCc
Q 001275 263 KNLTFLDLSYNRFSGGI----SPNLGNCSSLTHLDIVGSKLTGS----IPSSFGLLARLSSLDLSENQLSGK----IPPE 330 (1109)
Q Consensus 263 ~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 330 (1109)
++|+++..++|++.... ...|...+.|+.+.++.|.|... +...|...++|+.|||.+|-++.. +...
T Consensus 157 ~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Laka 236 (382)
T KOG1909|consen 157 PKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKA 236 (382)
T ss_pred cceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHH
Confidence 44555555555554322 22334445566666666655421 123455566666666666666521 2334
Q ss_pred cccccccceeeccCcccCCCCCcccc-----CCCCccEEEccCcccccc----CchHHHhhcccceeeccCCcc
Q 001275 331 LGKCKYLTVLHLYANQLEGEIPDELG-----QLSNLQDLELFDNRLTGE----FPVSIWRIASLEYLLVYNNNL 395 (1109)
Q Consensus 331 l~~l~~L~~L~L~~N~l~~~~p~~l~-----~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l 395 (1109)
+..+++|+.|+++++.+......+|. ..++|+.|.|.+|.|+.. +...+...+.|+.|+|++|++
T Consensus 237 L~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 237 LSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred hcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 55566666777776666654443332 256777777777776632 222334467777777777777
No 473
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=6.6e-11 Score=128.35 Aligned_cols=188 Identities=26% Similarity=0.293 Sum_probs=113.2
Q ss_pred CCCCceEEeecCccCCCCC--CcccccccccEEeccCCcccCCcc--hhhhcccccceeecccccccccCCccc-cCCCC
Q 001275 501 NPVLSHLDVSRNNISGAIP--SSIGNSINLTSIDFSSNKFSGLMP--QELGNLVSLVTLNISLNHVEGSLPSQL-SKCKN 575 (1109)
Q Consensus 501 ~~~L~~L~Ls~N~i~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~~ 575 (1109)
+.+|+...|.+.... ..+ .....+++++.||||+|-|....| .-...|++|+.|+|+.|++........ ..+++
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~ 198 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSH 198 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhh
Confidence 344555555555543 222 244556777777777776664333 224557777777777777653222211 13567
Q ss_pred ccEEEecCccccCC-CCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCC--CCchhhhhhhhhh
Q 001275 576 LEVFDVSFNLLNGS-IPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIP--PSIGALQDLSYAL 652 (1109)
Q Consensus 576 L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip--~~~~~l~~l~~~L 652 (1109)
|+.|.|+.+.|+-. +-.....+++|..|+|+.|...+.-.....-++.|++|||++|++. ..+ .-++.++.|. .|
T Consensus 199 lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li-~~~~~~~~~~l~~L~-~L 276 (505)
T KOG3207|consen 199 LKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLI-DFDQGYKVGTLPGLN-QL 276 (505)
T ss_pred hheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccc-ccccccccccccchh-hh
Confidence 77777777777621 1123345677788888877533233334455677888888888876 344 4466777773 68
Q ss_pred ccccccccc-ccCcc-----hhhcccCCeEEccCCcccccCCCCCc
Q 001275 653 NLSKNGLTG-RIPSD-----LEKLSKLEQLDISSNNLTGTLSPLSN 692 (1109)
Q Consensus 653 ~L~~N~l~g-~ip~~-----l~~l~~L~~L~Ls~N~l~g~~~~l~~ 692 (1109)
+++.+.++. .+|+. ...+++|++|+++.|++. .++.+.+
T Consensus 277 nls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~ 321 (505)
T KOG3207|consen 277 NLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNH 321 (505)
T ss_pred hccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccch
Confidence 888888774 23444 456778888888888886 4554433
No 474
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.03 E-value=1.3e-09 Score=125.57 Aligned_cols=167 Identities=15% Similarity=0.150 Sum_probs=126.7
Q ss_pred EeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEeccCCCHHHHHhccCCCCCCCH
Q 001275 839 SLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEW 918 (1109)
Q Consensus 839 ~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~ 918 (1109)
+..++.+|.|........ .......+.++.++.++||+|+++++.+..++..|+|+|-+. .|..+++.. ..
T Consensus 33 ~k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------~~ 103 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------GK 103 (690)
T ss_pred eeccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------HH
Confidence 455688888887754433 334557888999999999999999999999999999999884 677777763 34
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCCCCCCceeeecccCccccccccccc
Q 001275 919 NVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDKSPASTTSISVVGTIGYIAPENAFT 998 (1109)
Q Consensus 919 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 998 (1109)
..+.-.+.||+.||.+||+ +.+++|++|.-..|+|++.|+.||++|-++........ ......--..|..|+.+..
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCc
Confidence 5666678999999999986 56899999999999999999999999988764432211 1111222234666664322
Q ss_pred CCCCccCcchhhHHHHHHHHhC
Q 001275 999 TAKSKESDVYSYGVVLLELITR 1020 (1109)
Q Consensus 999 ~~~~~~sDvwSlGvil~elltg 1020 (1109)
.. -..|.|-||+++||++.|
T Consensus 180 s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCc
Confidence 22 346999999999999999
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.01 E-value=1.1e-10 Score=116.76 Aligned_cols=126 Identities=28% Similarity=0.361 Sum_probs=40.1
Q ss_pred CCCCCCCCceEEeecCccCCCCCCccc-ccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCccc-cCCC
Q 001275 497 EFSKNPVLSHLDVSRNNISGAIPSSIG-NSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQL-SKCK 574 (1109)
Q Consensus 497 ~~~~~~~L~~L~Ls~N~i~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~ 574 (1109)
.+.+...+++|+|++|+|+ .+ +.++ .+.+|+.||||+|+|+.. ..+..++.|++|++++|+|+ .++..+ ..++
T Consensus 14 ~~~n~~~~~~L~L~~n~I~-~I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 14 QYNNPVKLRELNLRGNQIS-TI-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp ------------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-T
T ss_pred ccccccccccccccccccc-cc-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 3444555677777777776 23 2344 356677777777777643 24666777777777777777 343333 3467
Q ss_pred CccEEEecCccccCCCC-cccccccccceeccccccccCCCcc----hhhhhhhhhhhh
Q 001275 575 NLEVFDVSFNLLNGSIP-SSLRSWKSLSILKLSENHFTGGIPT----FISELEKLLELQ 628 (1109)
Q Consensus 575 ~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~ 628 (1109)
+|+.|+|++|+|...-- ..+..+++|+.|+|.+|.++.. +. .+..+++|+.||
T Consensus 89 ~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 89 NLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp T--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEET
T ss_pred cCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeC
Confidence 77777777777763211 3455677777777777777632 22 345566666665
No 476
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.01 E-value=3.2e-09 Score=108.49 Aligned_cols=137 Identities=12% Similarity=0.157 Sum_probs=98.7
Q ss_pred ceeecccCeEEEEEEeCC-------CcEEEEEEeeeccc-----------c---------cC-hHHH----HHHHHHHhc
Q 001275 825 HVIGRGAHGIVYKASLGP-------NAVFAVKKLAFRGH-----------K---------RG-SLSM----KREIQTIGK 872 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-----------~---------~~-~~~~----~~E~~~l~~ 872 (1109)
..||.|.-+.||.|...+ +..+|||..+.... + .. ...+ ++|++.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999996543 57899998743210 0 01 1122 389999999
Q ss_pred CCC--CceeeEeeEEecCCceeEEEEeccCCCHHH-HHhccCCCCCCCHHHHHHHHHHHHHHHHHh-hcCCCCCeEEecc
Q 001275 873 IRH--RNLVRLEDFWLRKDCGIIMYRYMENGSLRD-VLHSITPPPTLEWNVRYKIALGAAHALAYL-HYDCDPPIVHRDI 948 (1109)
Q Consensus 873 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~~L~~L-H~~~~~~ivH~Dl 948 (1109)
+.. -++.+++++ ...++||||+.++.+.. .++.. .++.+....+..+++.++.++ | ..+|||||+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----KLNDEEMKNAYYQVLSMMKQLYK---ECNLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----ccCHHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 853 456666654 46789999998754422 22221 244455667889999999999 7 889999999
Q ss_pred CCCCeeeCCCCcEEEecccCCcccC
Q 001275 949 KPENILLDSEMEPHISDFGIAKLLD 973 (1109)
Q Consensus 949 k~~NIll~~~~~~kl~DfGla~~~~ 973 (1109)
++.||+++ ++.++++|||.+...+
T Consensus 152 s~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 152 SEYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred CHHHEEEE-CCcEEEEECCCceeCC
Confidence 99999997 4689999999887654
No 477
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.99 E-value=2.1e-10 Score=131.07 Aligned_cols=250 Identities=19% Similarity=0.186 Sum_probs=172.6
Q ss_pred HHhhCCCCCceeecccCeEEEEEEe--CCCcEEEEEEeeecccccCh-HHHHHHHHHHhcC-CCCceeeEeeEEecCCce
Q 001275 816 EATENLNAKHVIGRGAHGIVYKASL--GPNAVFAVKKLAFRGHKRGS-LSMKREIQTIGKI-RHRNLVRLEDFWLRKDCG 891 (1109)
Q Consensus 816 ~~~~~~~~~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 891 (1109)
....+|..+..||.|.|+.|++... .++..|++|........... ..-..|+.+...+ .|.++++.+..|...+..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 3345788889999999999999844 46888999977443222211 2234566666666 589999988888888888
Q ss_pred eEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC-CcEEEecccCCc
Q 001275 892 IIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE-MEPHISDFGIAK 970 (1109)
Q Consensus 892 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfGla~ 970 (1109)
|+--||+++++....... ...++...++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||.+.
T Consensus 342 ~ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred cCchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccc
Confidence 999999999988776632 223677788899999999999999 9999999999999999886 788999999986
Q ss_pred ccCCCCCCceeeecccCccc-ccccccccCCCCccCcchhhHHHHHHHHhCCCCCCCCccccccHHHHHHHhhcCccccc
Q 001275 971 LLDKSPASTTSISVVGTIGY-IAPENAFTTAKSKESDVYSYGVVLLELITRKKALDPSYKERTDIVGWVRSVWSDTEEIN 1049 (1109)
Q Consensus 971 ~~~~~~~~~~~~~~~gt~~y-~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 1049 (1109)
.+.... .....++..| .+|+......+..++|+||||.-+.+.+++..--.... .|......
T Consensus 416 ~~~~~~----~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~-------~~~~i~~~------ 478 (524)
T KOG0601|consen 416 RLAFSS----GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV-------QSLTIRSG------ 478 (524)
T ss_pred ccceec----ccccccccccccchhhccccccccccccccccccccccccCcccCcccc-------cceeeecc------
Confidence 432111 1111223333 35666666778899999999999999999875322110 01000000
Q ss_pred cccchhhhHHhhhchhHHHHHHHHHHHHhccCCCCCCCCCHHHHHHHhhh
Q 001275 1050 DIVDLSLMEEMLVSSIRDQVIDVLLVALRCTEKKPSNRPNMRDVVRQLVD 1099 (1109)
Q Consensus 1050 ~~~d~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~evl~~L~~ 1099 (1109)
.. +. .......+..+...+...++..||.+.+...+...
T Consensus 479 ~~--p~---------~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 479 DT--PN---------LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred cc--cC---------CCchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 00 00 00111233445557888999999999888766543
No 478
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=98.97 E-value=8.2e-11 Score=127.64 Aligned_cols=160 Identities=21% Similarity=0.201 Sum_probs=83.6
Q ss_pred CCCcccceeecccccCCCCcc--cccccccCccEEEeccccccCcCc--hhcccccccccccccCcccCCcccccccCCC
Q 001275 188 GDLKEVEALWLFSNRLSGTIP--ESIGNCYRLQELYLNENKLMGFLP--ESLSNLENLVYLDVGDNNLEGRINFGSEKCK 263 (1109)
Q Consensus 188 ~~l~~L~~L~L~~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~~~~~--~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 263 (1109)
+++++|+...|.+.... ..+ +....+++++.|+|++|-+....+ .....|++|+.|+|+.|++.......
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~----- 191 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSN----- 191 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcccc-----
Confidence 35667777777776665 222 245566677777777776654322 22344555555555555554221111
Q ss_pred CcchhccccccccCCCCcccccccCCcEEEeecCCCCCc-CCccccccccccEEEcCCCCCCCCCCCccccccccceeec
Q 001275 264 NLTFLDLSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGS-IPSSFGLLARLSSLDLSENQLSGKIPPELGKCKYLTVLHL 342 (1109)
Q Consensus 264 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L 342 (1109)
.-..++.|+.|.|+.|.++.. +-.....+++|+.|+|..|..-..-......+..|+.|||
T Consensus 192 ------------------~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdL 253 (505)
T KOG3207|consen 192 ------------------TTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDL 253 (505)
T ss_pred ------------------chhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccc
Confidence 011345566666666666521 1222344566666666666422233333444556666666
Q ss_pred cCcccCCCCC--ccccCCCCccEEEccCcccc
Q 001275 343 YANQLEGEIP--DELGQLSNLQDLELFDNRLT 372 (1109)
Q Consensus 343 ~~N~l~~~~p--~~l~~l~~L~~L~L~~N~l~ 372 (1109)
++|++.. .+ ...+.++.|+.|+++.+.+.
T Consensus 254 s~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~ 284 (505)
T KOG3207|consen 254 SNNNLID-FDQGYKVGTLPGLNQLNLSSTGIA 284 (505)
T ss_pred cCCcccc-cccccccccccchhhhhccccCcc
Confidence 6666653 22 23455666666666666655
No 479
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.96 E-value=4.7e-09 Score=102.77 Aligned_cols=133 Identities=25% Similarity=0.347 Sum_probs=100.7
Q ss_pred ceeecccCeEEEEEEeCCCcEEEEEEe-eeccccc------ChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEEEe
Q 001275 825 HVIGRGAHGIVYKASLGPNAVFAVKKL-AFRGHKR------GSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMYRY 897 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~~~vavK~~-~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 897 (1109)
..+++|+-+.+|.+.+.+ ..+++|.- ++...-. ...+..+|+.++.+.+--.|.-..-+..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~g-~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLG-LPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeeccC-cceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 357899999999997764 34555533 2222111 123567899999998766665555566677888999999
Q ss_pred ccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCccc
Q 001275 898 MENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLL 972 (1109)
Q Consensus 898 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 972 (1109)
++|..|.+.+... ...++..+-+-+.-|| ..+|||+|+.++||.+..+. +.++|||++.+-
T Consensus 81 I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 81 IEGELLKDALEEA----------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred eCChhHHHHHHhc----------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999999888763 2467777888889999 99999999999999998765 999999999743
No 480
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.95 E-value=7.3e-10 Score=137.97 Aligned_cols=151 Identities=25% Similarity=0.323 Sum_probs=88.0
Q ss_pred CCCCccEeecCCCcccccCCCCCCCCCCCcEeeccCcc--ccCCCCccccccCccceeccccccccccCCcccccccccc
Q 001275 93 HLSKLQTIDLSSNNFSGNIPPKLGNCSALEYLDLSTNG--FTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQ 170 (1109)
Q Consensus 93 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~--l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~ 170 (1109)
.....+...+.+|.+. .++.... .+.|+.|-+..|. +....++.|..++.|++|||++|.=-+.+|..++++-+||
T Consensus 521 ~~~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lr 598 (889)
T KOG4658|consen 521 SWNSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLR 598 (889)
T ss_pred chhheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhh
Confidence 3345556666666554 3333322 2356666666664 4433333466677777777776654456777777777777
Q ss_pred eecccccccccccccccCCCcccceeecccccCCCCcccccccccCccEEEeccccc--cCcCchhcccccccccccc
Q 001275 171 YVFLNNNSLSGSIPRNVGDLKEVEALWLFSNRLSGTIPESIGNCYRLQELYLNENKL--MGFLPESLSNLENLVYLDV 246 (1109)
Q Consensus 171 ~L~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l--~~~~~~~l~~l~~L~~L~L 246 (1109)
+|++++..++ .+|..+++|+.|.+|++..+.-...+|..+..+++|++|.+..-.. +...-..+.++++|+.+..
T Consensus 599 yL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 599 YLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSI 675 (889)
T ss_pred cccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhhee
Confidence 7777777766 6666777777777777776665555555666677777776665442 2222333444555555544
No 481
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.94 E-value=4.7e-09 Score=112.28 Aligned_cols=142 Identities=18% Similarity=0.250 Sum_probs=108.5
Q ss_pred ceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCC--ceeeEeeEEecCC---ceeEEEEecc
Q 001275 825 HVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHR--NLVRLEDFWLRKD---CGIIMYRYME 899 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~e~~~ 899 (1109)
+.++.|.++.||+++..+|+.+++|.............+.+|++++..+++. .+.+++.+....+ ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 5689999999999988777889999864333222455788999999999753 4566777765532 5689999999
Q ss_pred CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------------
Q 001275 900 NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYD----------------------------------------- 938 (1109)
Q Consensus 900 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------- 938 (1109)
|+++.+.+.. ..++......++.++++++.+||..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888765432 2366777778888888888888842
Q ss_pred ------------CCCCeEEeccCCCCeeeCC--CCcEEEecccCCc
Q 001275 939 ------------CDPPIVHRDIKPENILLDS--EMEPHISDFGIAK 970 (1109)
Q Consensus 939 ------------~~~~ivH~Dlk~~NIll~~--~~~~kl~DfGla~ 970 (1109)
....++|+|+++.||+++. ++.+.++||+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 0245799999999999998 6678999999876
No 482
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.92 E-value=7.7e-10 Score=110.75 Aligned_cols=16 Identities=31% Similarity=0.420 Sum_probs=4.6
Q ss_pred ccCCCCeEEccCCcCc
Q 001275 405 ELKQLKNISLYNNQFS 420 (1109)
Q Consensus 405 ~l~~L~~L~L~~N~l~ 420 (1109)
.+++|+.|+|.+|+++
T Consensus 111 ~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 111 SLPKLRVLSLEGNPVC 126 (175)
T ss_dssp G-TT--EEE-TT-GGG
T ss_pred cCCCcceeeccCCccc
Confidence 3444444444444443
No 483
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.92 E-value=1.3e-08 Score=98.83 Aligned_cols=144 Identities=22% Similarity=0.312 Sum_probs=106.8
Q ss_pred CCceeecccCeEEEEEEeCCCcEEEEEEeeecccc-------cChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 823 AKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHK-------RGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 823 ~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
....+-+|+-+.|+++.+. |+...||.-..+... -..++..+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4567889999999999887 666666643222211 12356788999999987555554444566667778999
Q ss_pred EeccC-CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCC---cEEEecccCCcc
Q 001275 896 RYMEN-GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEM---EPHISDFGIAKL 971 (1109)
Q Consensus 896 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~DfGla~~ 971 (1109)
||+++ .++.+++......+. +.+.....+..|-+.+.-|| ..+|+|+||..+||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99977 488888877654332 23333678889999999999 99999999999999996654 468999999864
No 484
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.89 E-value=8.1e-10 Score=137.56 Aligned_cols=250 Identities=24% Similarity=0.240 Sum_probs=148.2
Q ss_pred CCccEeecCCCc--ccccCCCCCCCCCCCcEeeccCccccCCCCccccccCccceeccccccccccCCccccccccccee
Q 001275 95 SKLQTIDLSSNN--FSGNIPPKLGNCSALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYV 172 (1109)
Q Consensus 95 ~~L~~L~L~~n~--l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 172 (1109)
+.|++|-+.+|. +....++.|..++.|++||||+|.=-+.+|..+++|-+||+|+|+++.++ .+|.++.++.+|.+|
T Consensus 545 ~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~L 623 (889)
T KOG4658|consen 545 PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYL 623 (889)
T ss_pred CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhhee
Confidence 368888888886 54344455888999999999998777789999999999999999999998 899999999999999
Q ss_pred cccccccccccccccCCCcccceeecccccCC--CCcccccccccCccEEEeccccccCcCchhcccccccc----cccc
Q 001275 173 FLNNNSLSGSIPRNVGDLKEVEALWLFSNRLS--GTIPESIGNCYRLQELYLNENKLMGFLPESLSNLENLV----YLDV 246 (1109)
Q Consensus 173 ~Ls~n~l~~~~p~~l~~l~~L~~L~L~~N~l~--~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~----~L~L 246 (1109)
++..+.-...+|..+..|.+|++|.+..-... ...-..+.++.+|+.+....... .+-..+..++.|. .+.+
T Consensus 624 nl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~ 701 (889)
T KOG4658|consen 624 NLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSI 701 (889)
T ss_pred ccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhh
Confidence 99998876677777788999999998876522 22333445555666555543332 1122233333333 2222
Q ss_pred cCcccCCcccccccCCCCcchhccccccccCCCCccccc------ccCCcEEEeecCCCCCcCCccccccccccEEEcCC
Q 001275 247 GDNNLEGRINFGSEKCKNLTFLDLSYNRFSGGISPNLGN------CSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSE 320 (1109)
Q Consensus 247 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~------l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 320 (1109)
..+... ..+..+..+.+|+.|.+.++.+.......... ++++..+...++..- ..+.+.-..++|+.|++..
T Consensus 702 ~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~ 779 (889)
T KOG4658|consen 702 EGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVS 779 (889)
T ss_pred cccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEec
Confidence 222211 22333455566666666665554322211111 111111111111111 1122222345666666666
Q ss_pred CCCCCCCCCccccccccceeeccCcccCC
Q 001275 321 NQLSGKIPPELGKCKYLTVLHLYANQLEG 349 (1109)
Q Consensus 321 N~l~~~~p~~l~~l~~L~~L~L~~N~l~~ 349 (1109)
+.....+.+....+..++.+-+..+.+.+
T Consensus 780 ~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 780 CRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred ccccccCCCHHHHhhhcccEEeccccccc
Confidence 55544444444444455544455555544
No 485
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.85 E-value=1.9e-09 Score=81.10 Aligned_cols=41 Identities=46% Similarity=0.944 Sum_probs=31.5
Q ss_pred hhhHHHHHHHHHhccCCCCcccCCCCCCC-CCCceeeeEEec
Q 001275 27 NGDGVALLSLMRHWNSVPPLIISSWNSSD-STPCQWVGIECD 67 (1109)
Q Consensus 27 ~~~~~all~~~~~~~~~~~~~l~sW~~~~-~~~c~w~gv~C~ 67 (1109)
+.|++||++||+++..+|...+.+|+.+. .+||.|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 57999999999999887888999999874 689999999996
No 486
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.80 E-value=7.3e-08 Score=104.56 Aligned_cols=193 Identities=13% Similarity=0.188 Sum_probs=127.8
Q ss_pred CCCceeecccCeEEEEEEeCCCcEEEEEEeeecccccChHHHHHHHHHHhcC-CCCceeeEeeE------EecC-CceeE
Q 001275 822 NAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKI-RHRNLVRLEDF------WLRK-DCGII 893 (1109)
Q Consensus 822 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~------~~~~-~~~~l 893 (1109)
...+.||+|+.+.+|-.-.-.+. +.|++.... ...-.+.+..|... .||-+-.-+.| .-+. ....+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~d~--VAKIYh~Pp----pa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVRDQ--VAKIYHAPP----PAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecchhhch--hheeecCCC----chHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 34567999999999975222121 345552221 11122334445454 46544331222 1111 22456
Q ss_pred EEEeccCC-CHHHHHh---ccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCC
Q 001275 894 MYRYMENG-SLRDVLH---SITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIA 969 (1109)
Q Consensus 894 v~e~~~~g-sL~~~l~---~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 969 (1109)
+|..+.+. ...+++. +.+.-+..+|...++++..++.+.+-|| ..|.+-+|+.++|+|+++++.+.+.|-..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccce
Confidence 77766653 2333332 2233456899999999999999999999 889999999999999999999999986544
Q ss_pred cccCCCCCCceeeecccCcccccccccc-----cCCCCccCcchhhHHHHHHHHhC-CCCCCC
Q 001275 970 KLLDKSPASTTSISVVGTIGYIAPENAF-----TTAKSKESDVYSYGVVLLELITR-KKALDP 1026 (1109)
Q Consensus 970 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~sDvwSlGvil~elltg-~~p~~~ 1026 (1109)
.... ........+|...|.+||.-. +...+...|-|.+||++++++.| ++||.+
T Consensus 165 qi~~---ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysG 224 (637)
T COG4248 165 QINA---NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSG 224 (637)
T ss_pred eecc---CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCc
Confidence 4332 222333467899999999443 44557899999999999999987 899865
No 487
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.72 E-value=3.6e-09 Score=126.73 Aligned_cols=203 Identities=22% Similarity=0.270 Sum_probs=143.5
Q ss_pred hCCCCCceeecccCeEEEEEEeC-CCcEEEEEEeeec--ccccChHHHHHHHHHHhcCCCCceeeEeeEEecCCceeEEE
Q 001275 819 ENLNAKHVIGRGAHGIVYKASLG-PNAVFAVKKLAFR--GHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLRKDCGIIMY 895 (1109)
Q Consensus 819 ~~~~~~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 895 (1109)
+.+...+-+-+|.++.++.+.-. .|...++|..... -.........++-.+.-..+||-+++...-+......++|+
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~ 883 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVG 883 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhh
Confidence 45556667888999998877432 2333333332111 11111222233333333345677777666555667889999
Q ss_pred EeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCcccCC-
Q 001275 896 RYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLLDK- 974 (1109)
Q Consensus 896 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~- 974 (1109)
+|..++++...++... ..+.+.....+..+..+.+||| ...+.|||++|.|.+...++..+++|||......-
T Consensus 884 ~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 884 HYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred HHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccc
Confidence 9999999999998755 2444455566777889999999 77799999999999999999999999984322110
Q ss_pred --------------------CC----CC----ceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCCCCCC
Q 001275 975 --------------------SP----AS----TTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKKALDP 1026 (1109)
Q Consensus 975 --------------------~~----~~----~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~p~~~ 1026 (1109)
.. .. .......||+.|.|||...+......+|.|+.|++++|.++|..||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 00 00 112345799999999999999999999999999999999999999975
Q ss_pred C
Q 001275 1027 S 1027 (1109)
Q Consensus 1027 ~ 1027 (1109)
.
T Consensus 1038 ~ 1038 (1205)
T KOG0606|consen 1038 E 1038 (1205)
T ss_pred c
Confidence 4
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.69 E-value=1.8e-07 Score=101.43 Aligned_cols=142 Identities=17% Similarity=0.142 Sum_probs=100.1
Q ss_pred ceeecccCeEEEEEEeCCCcEEEEEEeeecccc----------cChHHHHHHHHHHhcCCCCc--eeeEeeEEec-----
Q 001275 825 HVIGRGAHGIVYKASLGPNAVFAVKKLAFRGHK----------RGSLSMKREIQTIGKIRHRN--LVRLEDFWLR----- 887 (1109)
Q Consensus 825 ~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~----- 887 (1109)
+.+-......|++.... |+.|.||+....... .....+.+|+..+.++...+ +.+++++...
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 34444444457777664 778999976332211 11224789999998884333 3344555433
Q ss_pred CCceeEEEEeccCC-CHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCC-------CC
Q 001275 888 KDCGIIMYRYMENG-SLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDS-------EM 959 (1109)
Q Consensus 888 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-------~~ 959 (1109)
....++|+|++++. +|.+++.... ....+...+..++.++++.+.-|| ..+|+|+|++++|||++. +.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCc
Confidence 23468999999986 8999885322 123456677789999999999999 999999999999999975 46
Q ss_pred cEEEecccCCcc
Q 001275 960 EPHISDFGIAKL 971 (1109)
Q Consensus 960 ~~kl~DfGla~~ 971 (1109)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 799999998864
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.65 E-value=1.3e-07 Score=96.45 Aligned_cols=127 Identities=23% Similarity=0.212 Sum_probs=82.6
Q ss_pred EEEEEEeCCCcEEEEEEeeeccc------------cc-------------ChHHHHHHHHHHhcCCCC--ceeeEeeEEe
Q 001275 834 IVYKASLGPNAVFAVKKLAFRGH------------KR-------------GSLSMKREIQTIGKIRHR--NLVRLEDFWL 886 (1109)
Q Consensus 834 ~Vy~~~~~~~~~vavK~~~~~~~------------~~-------------~~~~~~~E~~~l~~l~h~--niv~l~~~~~ 886 (1109)
.||.|...+|..+|+|....... .. .....++|++.|.++... ++.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 48999999999999998743210 00 012467899999999765 45666654
Q ss_pred cCCceeEEEEecc--CCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHH-hhcCCCCCeEEeccCCCCeeeCCCCcEEE
Q 001275 887 RKDCGIIMYRYME--NGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAY-LHYDCDPPIVHRDIKPENILLDSEMEPHI 963 (1109)
Q Consensus 887 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~-LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 963 (1109)
...++||||++ |..+....... ++.+....++.++++.+.. +| ..+|||||+.+.||+++++ .+.+
T Consensus 79 --~~~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp --ETTEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE
T ss_pred --eCCEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEE
Confidence 24589999998 65554433321 1123345667777774444 57 8899999999999999888 9999
Q ss_pred ecccCCcccC
Q 001275 964 SDFGIAKLLD 973 (1109)
Q Consensus 964 ~DfGla~~~~ 973 (1109)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999887554
No 490
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.64 E-value=2e-08 Score=82.60 Aligned_cols=61 Identities=44% Similarity=0.645 Sum_probs=47.4
Q ss_pred CCccEeecCCCcccccCCCCCCCCCCCcEeeccCccccCCCCccccccCccceeccccccc
Q 001275 95 SKLQTIDLSSNNFSGNIPPKLGNCSALEYLDLSTNGFTGDIPDNFENLQNLQYLNLYGNLL 155 (1109)
Q Consensus 95 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~L~~L~~L~L~~n~l 155 (1109)
++|++|++++|+++...+..|.++++|++|++++|.++...|..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4677888888888866666778888888888888888877777788888888888888764
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.64 E-value=1.8e-08 Score=82.83 Aligned_cols=59 Identities=34% Similarity=0.521 Sum_probs=27.7
Q ss_pred CCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeeccccc
Q 001275 503 VLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNH 561 (1109)
Q Consensus 503 ~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 561 (1109)
+|++|++++|+|+...+..|.++++|++|++++|+++...|..|..+++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34455555555553333444445555555555555544434444444444444444443
No 492
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.57 E-value=2.1e-07 Score=96.86 Aligned_cols=136 Identities=20% Similarity=0.194 Sum_probs=95.9
Q ss_pred CCCceeecccCeEEEEEEeCCCcEEEEEEeeecc-----------------cc----cChHHHHHHHHHHhcCCCC--ce
Q 001275 822 NAKHVIGRGAHGIVYKASLGPNAVFAVKKLAFRG-----------------HK----RGSLSMKREIQTIGKIRHR--NL 878 (1109)
Q Consensus 822 ~~~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~-----------------~~----~~~~~~~~E~~~l~~l~h~--ni 878 (1109)
.+...||.|.-+.||.|....|.++|||.-.... .. ......++|+++|.++... .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 4567899999999999999999999999532111 00 1123567899999999654 67
Q ss_pred eeEeeEEecCCceeEEEEeccCCCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCC
Q 001275 879 VRLEDFWLRKDCGIIMYRYMENGSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSE 958 (1109)
Q Consensus 879 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 958 (1109)
.+.+++ +...+||||++|-.|...- ++.+..-.++..|++-+...- ..||||+|+++-||++++|
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~d 238 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTED 238 (304)
T ss_pred CCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEecC
Confidence 777665 5668999999986654421 112222233444444444433 4689999999999999999
Q ss_pred CcEEEecccCCccc
Q 001275 959 MEPHISDFGIAKLL 972 (1109)
Q Consensus 959 ~~~kl~DfGla~~~ 972 (1109)
|.+.++||--+...
T Consensus 239 g~~~vIDwPQ~v~~ 252 (304)
T COG0478 239 GDIVVIDWPQAVPI 252 (304)
T ss_pred CCEEEEeCcccccC
Confidence 99999999766543
No 493
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.56 E-value=1.9e-06 Score=96.53 Aligned_cols=169 Identities=20% Similarity=0.299 Sum_probs=126.1
Q ss_pred cCeEEEEEE-eCCCcEEEEEEeeecccccChHHHHHHHHHHhcCCCCceeeEeeEEec----CCceeEEEEeccC-CCHH
Q 001275 831 AHGIVYKAS-LGPNAVFAVKKLAFRGHKRGSLSMKREIQTIGKIRHRNLVRLEDFWLR----KDCGIIMYRYMEN-GSLR 904 (1109)
Q Consensus 831 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~ 904 (1109)
.-.+.||+. ..+|..|+.|++.-..... ...-..-+++++++.|.|+|++.+++.. +...++||+|.++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~-~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQS-TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccC-cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence 346789994 4579999999983322221 2123456889999999999999998763 3357899999986 4787
Q ss_pred HHHhccC------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCcEEEecccCCccc
Q 001275 905 DVLHSIT------------PPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEMEPHISDFGIAKLL 972 (1109)
Q Consensus 905 ~~l~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 972 (1109)
++.-... .....++...|.++.|+..||.++| +.|..-+-|.+++|+++.+.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeee
Confidence 7553211 1224678899999999999999999 889999999999999999999999988877666
Q ss_pred CCCCCCceeeecccCcccccccccccCCCCccCcchhhHHHHHHHHhCCC
Q 001275 973 DKSPASTTSISVVGTIGYIAPENAFTTAKSKESDVYSYGVVLLELITRKK 1022 (1109)
Q Consensus 973 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~sDvwSlGvil~elltg~~ 1022 (1109)
..++. +| +. --.+-|.=.+|.+++.+.||..
T Consensus 444 ~~d~~--------------~~--le---~~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 444 QEDPT--------------EP--LE---SQQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred cCCCC--------------cc--hh---HHhhhhHHHHHHHHHHHhhccc
Confidence 54331 00 11 1236788889999999999964
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.50 E-value=5.3e-09 Score=119.80 Aligned_cols=126 Identities=30% Similarity=0.396 Sum_probs=78.3
Q ss_pred CcchhccccccccCCCCcccccccCCcEEEeecCCCCCcCCccccccccccEEEcCCCCCCCCCCC-ccccccccceeec
Q 001275 264 NLTFLDLSYNRFSGGISPNLGNCSSLTHLDIVGSKLTGSIPSSFGLLARLSSLDLSENQLSGKIPP-ELGKCKYLTVLHL 342 (1109)
Q Consensus 264 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~l~~l~~L~~L~L 342 (1109)
.|.+.+.++|++. ....++.-++.|+.|+|++|+++... .+..+++|++|||++|.++ .+|. ...++. |..|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 4666677777776 44455666677777777777776432 5666777777777777776 3332 223333 777777
Q ss_pred cCcccCCCCCccccCCCCccEEEccCcccccc-CchHHHhhcccceeeccCCccC
Q 001275 343 YANQLEGEIPDELGQLSNLQDLELFDNRLTGE-FPVSIWRIASLEYLLVYNNNLL 396 (1109)
Q Consensus 343 ~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~ 396 (1109)
++|.++.. ..+.+|.+|+.||+++|-|.+- --..++.+..|+.|+|.+|.+-
T Consensus 240 rnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 240 RNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred cccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 77776632 3456677777777777766542 1123556667777777777664
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.43 E-value=5e-08 Score=89.75 Aligned_cols=109 Identities=22% Similarity=0.277 Sum_probs=52.6
Q ss_pred cceeecccccccccCCcccc-CCCCccEEEecCccccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcc
Q 001275 552 LVTLNISLNHVEGSLPSQLS-KCKNLEVFDVSFNLLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLG 630 (1109)
Q Consensus 552 L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~ 630 (1109)
|+..+|++|.+. ..|..|. +.+.++.|+|++|.|+ .+|.++..|+.|+.|+++.|.+. ..|..+..|.+|-.||..
T Consensus 55 l~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~ 131 (177)
T KOG4579|consen 55 LTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSP 131 (177)
T ss_pred EEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCC
Confidence 333345555554 3333333 2335555555555555 45555555555555555555555 455555555566666666
Q ss_pred cCcCCCCCCCCchhhhhhhhhhcccccccccccCc
Q 001275 631 GNQLGGEIPPSIGALQDLSYALNLSKNGLTGRIPS 665 (1109)
Q Consensus 631 ~N~l~g~ip~~~~~l~~l~~~L~L~~N~l~g~ip~ 665 (1109)
+|.+. +||-.+..- .+.....+.++.+.+.-|.
T Consensus 132 ~na~~-eid~dl~~s-~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 132 ENARA-EIDVDLFYS-SLPALIKLGNEPLGDETKK 164 (177)
T ss_pred CCccc-cCcHHHhcc-ccHHHHHhcCCcccccCcc
Confidence 65554 444332111 1112234455555544443
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.43 E-value=2.4e-08 Score=114.59 Aligned_cols=127 Identities=28% Similarity=0.353 Sum_probs=100.9
Q ss_pred CCCceEEeecCccCCCCCCcccccccccEEeccCCcccCCcchhhhcccccceeecccccccccCCcc-ccCCCCccEEE
Q 001275 502 PVLSHLDVSRNNISGAIPSSIGNSINLTSIDFSSNKFSGLMPQELGNLVSLVTLNISLNHVEGSLPSQ-LSKCKNLEVFD 580 (1109)
Q Consensus 502 ~~L~~L~Ls~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-l~~l~~L~~L~ 580 (1109)
..|...+.++|.++ ....++.-++.|+.||||+|+++.. +.+..|+.|++|||++|++. .+|.. ...+. |+.|.
T Consensus 164 n~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 164 NKLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hhHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhh-heeee
Confidence 35778889999998 6778888889999999999999854 47888999999999999998 56642 33344 99999
Q ss_pred ecCccccCCCCcccccccccceeccccccccCCC-cchhhhhhhhhhhhcccCcCC
Q 001275 581 VSFNLLNGSIPSSLRSWKSLSILKLSENHFTGGI-PTFISELEKLLELQLGGNQLG 635 (1109)
Q Consensus 581 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~ 635 (1109)
+++|.++.. ..+.++++|+-|||++|-+.+.- -..++.|..|+.|.|.||.+-
T Consensus 239 lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 239 LRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 999998732 45778899999999999887642 224577888999999999875
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.41 E-value=2.7e-08 Score=102.87 Aligned_cols=64 Identities=30% Similarity=0.375 Sum_probs=34.7
Q ss_pred CCCCCcEeeccCcccc--CCCCccccccCccceeccccccccccCCcccccccccceecccccccc
Q 001275 117 NCSALEYLDLSTNGFT--GDIPDNFENLQNLQYLNLYGNLLDGEIPEPLFRILGLQYVFLNNNSLS 180 (1109)
Q Consensus 117 ~l~~L~~L~Ls~n~l~--~~~p~~l~~L~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~ 180 (1109)
..+.+++|||.+|.|+ ..+-..+.+|+.|++|+|+.|++...|-..=..+.+|+.|.|.+..+.
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~ 134 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLS 134 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCC
Confidence 3466677777777766 233344566677777777777666332111123345555555554443
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.40 E-value=3.1e-08 Score=91.11 Aligned_cols=136 Identities=26% Similarity=0.381 Sum_probs=89.3
Q ss_pred CceEEeecCccCCCCCCccc---ccccccEEeccCCcccCCcchhhh-cccccceeecccccccccCCccccCCCCccEE
Q 001275 504 LSHLDVSRNNISGAIPSSIG---NSINLTSIDFSSNKFSGLMPQELG-NLVSLVTLNISLNHVEGSLPSQLSKCKNLEVF 579 (1109)
Q Consensus 504 L~~L~Ls~N~i~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 579 (1109)
+..++|+++++- .+++... ....|+..+|++|.+... |..|. ..+.+++|||++|+|+ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~f-p~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKF-PKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhC-CHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 445666666664 3444433 334566667777777743 44443 3457778888888887 677778888888888
Q ss_pred EecCccccCCCCcccccccccceeccccccccCCCcchhhhhhhhhhhhcccCcCCCCCCCCchh
Q 001275 580 DVSFNLLNGSIPSSLRSWKSLSILKLSENHFTGGIPTFISELEKLLELQLGGNQLGGEIPPSIGA 644 (1109)
Q Consensus 580 ~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~g~ip~~~~~ 644 (1109)
++++|.|. ..|..|..+.+|-.|+..+|.+. .+|..+-.-++.-..++.++.+.+.-|.....
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~klqa 168 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKKKLQA 168 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcccccc
Confidence 88888887 67777777888888888888877 56654322233334456777888777654433
No 499
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.35 E-value=2.4e-06 Score=89.76 Aligned_cols=108 Identities=23% Similarity=0.320 Sum_probs=84.6
Q ss_pred ChHHHHHHHHHHhcCCC--CceeeEeeEEecCC----ceeEEEEeccCC-CHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001275 859 GSLSMKREIQTIGKIRH--RNLVRLEDFWLRKD----CGIIMYRYMENG-SLRDVLHSITPPPTLEWNVRYKIALGAAHA 931 (1109)
Q Consensus 859 ~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~~ 931 (1109)
......+|...+.++.. -.+.+.+++..... ..++|+|++++. +|.+++..... .+......++.++++.
T Consensus 54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~ 130 (206)
T PF06293_consen 54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARL 130 (206)
T ss_pred cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHH
Confidence 34467889888888843 33455666655432 358999999984 89998876332 4556678899999999
Q ss_pred HHHhhcCCCCCeEEeccCCCCeeeCCCC---cEEEecccCCccc
Q 001275 932 LAYLHYDCDPPIVHRDIKPENILLDSEM---EPHISDFGIAKLL 972 (1109)
Q Consensus 932 L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~DfGla~~~ 972 (1109)
++-|| ..+|+|+|+++.|||++.+. .+.++||+-++..
T Consensus 131 i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 131 IAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99999 99999999999999998887 8999999987754
No 500
>PRK09902 hypothetical protein; Provisional
Probab=98.26 E-value=1.5e-05 Score=81.81 Aligned_cols=139 Identities=15% Similarity=0.070 Sum_probs=102.5
Q ss_pred eecccCeEEEEEEeCCCcEEEEEEeeec--c---cccChHHHHHHHHHHhcCCC--CceeeEeeEEecC----CceeEEE
Q 001275 827 IGRGAHGIVYKASLGPNAVFAVKKLAFR--G---HKRGSLSMKREIQTIGKIRH--RNLVRLEDFWLRK----DCGIIMY 895 (1109)
Q Consensus 827 lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~---~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~----~~~~lv~ 895 (1109)
-|+||-+.|++...++. .+-+|+-... . .+-....|.+|+..+.++.. -.+.+.+.+.... ...++|+
T Consensus 26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 46789999999887744 6888876311 1 13466789999999999953 3345554222221 2358999
Q ss_pred EeccC-CCHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEeccCCCCeeeCCCCc--EEEecccCCc
Q 001275 896 RYMEN-GSLRDVLHSITPPPTLEWNVRYKIALGAAHALAYLHYDCDPPIVHRDIKPENILLDSEME--PHISDFGIAK 970 (1109)
Q Consensus 896 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~DfGla~ 970 (1109)
|-+++ -+|.+++.... ....+...+..++.+++++++-|| ..++.|+|+-+.||+++.++. ++++||--++
T Consensus 105 e~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r 178 (216)
T PRK09902 105 EDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR 178 (216)
T ss_pred EeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence 97764 48999886532 224567777899999999999999 999999999999999986666 9999997665
Done!