BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>001283
MSTDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYA
TSEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIV
LKEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATT
DAVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRAR
TISVQSSGAISASGMGCTGGVGRGKVIGNGVGSGGGHGGKGGLGCFNDSCVEGGISYGNA
NLPCELGSGSGNDTSGNSTAGGGIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYV
VRNGSIGGAGGGSGGTILLFLHTLDIGDSAVLSSVGGYGSHMGGGGGGGGRIHFHWSDIP
TGDVYQPIASVRGSIRIGGGLGGHELGGGENGTTTGKACPKGLYGIFCEECPVGTYKNVT
GSDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGG
PWLFCLLLVGLLILLALVLSVARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLET
NRAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWW
EGAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAA
TPDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQ
LVPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQAT
ACGYCQYGLLVYAVGGENEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQ
RSSESYMKRKRSHGGIIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQDLVGLVISVLLL
GDFSLVLLTLLQLYSISLVDVFLVLFILPLGILLPFPAGINALFSHGPRRSVGLARVYAL
WNVTSLINVGVAFLCGYVHYSSGSSPNKKVPNFQPWNFSMDESEWWIFPAGLVLCKIFQS
QLVNWHVANLEIQDRTLYSNDFELFWQS

High Scoring Gene Products

Symbol, full name Information P value
AT4G32920 protein from Arabidopsis thaliana 0.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  001283
        (1108 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2123762 - symbol:AT4G32920 "AT4G32920" species...  2997  0.        2


>TAIR|locus:2123762 [details] [associations]
            symbol:AT4G32920 "AT4G32920" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] [GO:0005773 "vacuole" evidence=IDA] [GO:0006486
            "protein glycosylation" evidence=RCA] GO:GO:0005773 EMBL:CP002687
            IPI:IPI00546159 RefSeq:NP_001190893.1 RefSeq:NP_001190894.1
            RefSeq:NP_567910.1 UniGene:At.26242 UniGene:At.67561
            ProteinModelPortal:F4JV81 PRIDE:F4JV81 EnsemblPlants:AT4G32920.1
            EnsemblPlants:AT4G32920.2 EnsemblPlants:AT4G32920.3 GeneID:829429
            KEGG:ath:AT4G32920 OMA:DENEWWI ArrayExpress:F4JV81 Uniprot:F4JV81
        Length = 1432

 Score = 2997 (1060.1 bits), Expect = 0., Sum P(2) = 0.
 Identities = 574/948 (60%), Positives = 684/948 (72%)

Query:     2 STDTETLLLEFPNQPLWTNVYVQNCARATVPLLWSRVQVQGQISLSCGGVLSFGLAHYAT 61
             +T T+TLLLEFPN  L+TN+Y++N A+  VPL WSRVQVQG ISLS GG L+FGL  YA+
Sbjct:   342 TTYTDTLLLEFPNHRLFTNLYIRNMAKVAVPLRWSRVQVQGLISLSNGGELNFGLPRYAS 401

Query:    62 SEFELLAEELLMSDSVIKVYGALRMTVKIFLMWNSEMLVDGGGDATVATSLLEASNLIVL 121
             SEFEL AEELLMS+S IKVYGALRMTVK+FLM  S M +DGGG   + TS+LE SNL+VL
Sbjct:   402 SEFELFAEELLMSNSAIKVYGALRMTVKVFLMLKSRMFIDGGGVTILGTSMLEISNLLVL 461

Query:   122 KEFSIIHSNANLEVHGQGLLNLSGPGDRIEAQRLVLALFYSIHVGPGSVLRSPLENATTD 181
             KE S+I SN NL VHGQGLLNL+G GD IEAQRL+L+LFYSI VG G+VLR PL+NA+T 
Sbjct:   462 KESSVIQSNGNLGVHGQGLLNLTGTGDTIEAQRLILSLFYSIQVGAGAVLRGPLQNASTG 521

Query:   182 AVTPRLYCEIQDCPVELLHPPEDCNVNSSLSFTLQICRVEDIVVDGLVEGSVVHFHRART 241
              +TP+LYC+ QDCPVELLHPPEDCNVNSSL FTLQICRVEDI V+GL++GSV+ FH ART
Sbjct:   522 GLTPKLYCQRQDCPVELLHPPEDCNVNSSLPFTLQICRVEDITVEGLIKGSVIQFHLART 581

Query:   242 ISVQSSGAISASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCFNDSCVEGGISYGNAN 301
             + V+SSG ISA                                C+N +C+EGG SYGNA+
Sbjct:   582 VLVRSSGTISADGMGCKGGVGTGRFLRSGIGSGGGHGGKGGSGCYNHTCIEGGESYGNAD 641

Query:   302 LPCELXXXXXXXXXXXXXXXXXIIVMGSFEHPLSSLSVEGSVKADGQSFEDLSTKKNYVV 361
             LPCEL                 IIV+GS EHPLSSLS+EGS+  DG+S      +K    
Sbjct:   642 LPCELGSGSGNEESTDSVAGGGIIVLGSLEHPLSSLSLEGSITTDGES-----PRKTLKG 696

Query:   362 RNXXXXXXXXXXXXTILLFLHTLDIGDSAVLSSVXXXXXXXXXXXXXXXRIHFHWSDIPT 421
              +            T+LLFL TL+IG SA+LSS+               RIHFHWSDIPT
Sbjct:   697 LSNSSLGPGGGSGGTVLLFLRTLEIGRSAILSSIGGNGSLKGGGGGSGGRIHFHWSDIPT 756

Query:   422 GDVYQPIASVRGSIRIXXXXXXXXXXXXXXXXXXXKACPKGLYGIFCEECPVGTYKNVTG 481
             GDVY P+A V+G + +                   KACP+GLYG+FCEECP GTYKNVTG
Sbjct:   757 GDVYHPVAIVKGRVYVRGGMGIIEDNIGGNGTLTGKACPEGLYGLFCEECPSGTYKNVTG 816

Query:   482 SDKSLCHQCPPQEFPHRAVYISVRGGIAETPCPYRCISERYHMPHCYTALEELIYTFGGP 541
             SDK+LCH CP  + PHRAVY++VRGG+AETPCPY+CIS+RYHMPHCYT LEELIYTFGGP
Sbjct:   817 SDKALCHLCPANDIPHRAVYVTVRGGVAETPCPYKCISDRYHMPHCYTTLEELIYTFGGP 876

Query:   542 WXXXXXXXXXXXXXXXXXXXARMKFVGVDELPGPAPTQHGSQIDHSFPFLESLNEVLETN 601
             W                   ARMKFV  DEL G APTQHGSQIDHSFPFLESLNEV+ET+
Sbjct:   877 WLFGVLLVVVLLLLALVFSVARMKFVSGDELHGSAPTQHGSQIDHSFPFLESLNEVMETS 936

Query:   602 RAEESHSHVHRMYFMGPNTFSQPWHLPHTPPEQIKEIVYEGAFNSFVDEINAIATYHWWE 661
             R EES  H+HR+YF+GPNTFS+PWHL HTPPE+IKEIVYE AFN FVDE+N IA Y WWE
Sbjct:   937 RVEESQGHMHRIYFLGPNTFSEPWHLSHTPPEEIKEIVYEAAFNGFVDEVNVIAAYQWWE 996

Query:   662 GAIYSILAILAYPLAWSWQQWRRRMKLQRLREYVRSEYDHACLRSCRSRALYEGLKVAAT 721
             GAIY +L++L YPLAWSWQQ RRR+K Q+LR++VRSEYDH+CLRSCRSRALYEGLKVAAT
Sbjct:   997 GAIYIMLSVLVYPLAWSWQQSRRRLKFQKLRDFVRSEYDHSCLRSCRSRALYEGLKVAAT 1056

Query:   722 PDLMLAYLDFFLGGDEKRTDLPPCLHHRFPMSLIFGGDGSYMAPFSLQNDNILTSLMSQL 781
             PDLMLA+LDFFLGGDEKR+DLPP +H R PM LIFGGDGSYMA +SLQ+D+ILTSL+SQL
Sbjct:  1057 PDLMLAHLDFFLGGDEKRSDLPPQVHQRLPMPLIFGGDGSYMAYYSLQSDDILTSLLSQL 1116

Query:   782 VPPTICYRLVAGLNAQLRLVRRGRLRATFRPVLRWLETHANPTLQLHGLRVDLAWFQATA 841
             VPPT  YR VAGLNAQLRLV++G+LR+TFR V+RW+ETH NP L+ HG+RVDLA FQA +
Sbjct:  1117 VPPTTWYRFVAGLNAQLRLVQQGKLRSTFRSVMRWIETHGNPALKRHGVRVDLARFQALS 1176

Query:   842 CGYCQYGLLVYAVGGENEPTSIGSFDRGRLIERESRVKSIDMENPSGRLREETLLTRAQR 901
                CQYG+LV+ +   +E  S  S D       +       +EN SG  RE     +  R
Sbjct:  1177 SSSCQYGILVHTIA--DEVASTRSDDE----TEQQHPWGTQIENHSGDFRENF---QPLR 1227

Query:   902 SSESYMKRKRSHGGIIDTNNVQMLEERRDIFYFLSFIVHNTKPVGHQD 949
             S  ++++ +   G IID  ++Q L+E +D+   +SF++HNTKPVGHQD
Sbjct:  1228 SEINHVRHQEC-GEIIDIGSLQFLKEEKDVLSLISFLIHNTKPVGHQD 1274

 Score = 454 (164.9 bits), Expect = 0., Sum P(2) = 0.
 Identities = 82/108 (75%), Positives = 90/108 (83%)

Query:  1001 NALFSHGPRRSVGLARVYALWNVTSLINVGVAFLCGYVHYSSGSSPNKKVPNFQPWNFSM 1060
             +ALFSHGPRRS    RVYALWNVTSL+NV VAF+CGYVHY  GSS  KK+P  QPWN SM
Sbjct:  1326 SALFSHGPRRSASRTRVYALWNVTSLVNVVVAFVCGYVHYH-GSSSGKKIPYLQPWNISM 1384

Query:  1061 DESEWWIFPAGLVLCKIFQSQLVNWHVANLEIQDRTLYSNDFELFWQS 1108
             DE+EWWIFP  L LCK+ QSQLVNWHVANLEIQD +LYS+D ELFWQS
Sbjct:  1385 DENEWWIFPVALFLCKVLQSQLVNWHVANLEIQDYSLYSDDSELFWQS 1432

 Score = 40 (19.1 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
 Identities = 9/16 (56%), Positives = 11/16 (68%)

Query:   334 LSSLSVEGSVKADGQS 349
             L  +S+ GSV ADG S
Sbjct:   236 LGYISLNGSVLADGAS 251

 Score = 37 (18.1 bits), Expect = 1.3e-36, Sum P(3) = 1.3e-36
 Identities = 8/19 (42%), Positives = 12/19 (63%)

Query:    95 NSEMLVDGGGDATVATSLL 113
             ++E+   GGG  TVA  +L
Sbjct:   218 SNEVDYGGGGGGTVAIEIL 236


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1108       946   0.00093  122 3  11 22  0.36    34
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  630 (67 KB)
  Total size of DFA:  507 KB (2233 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  67.59u 0.11s 67.70t   Elapsed:  00:00:04
  Total cpu time:  67.59u 0.11s 67.70t   Elapsed:  00:00:04
  Start:  Sat May 11 06:43:36 2013   End:  Sat May 11 06:43:40 2013

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