Query 001291
Match_columns 1106
No_of_seqs 692 out of 5704
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 20:56:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001291.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001291hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 4E-190 8E-195 1718.3 71.7 1005 36-1102 12-1037(1391)
2 PLN03140 ABC transporter G fam 100.0 2E-176 4E-181 1714.0 107.6 1094 4-1100 5-1124(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 9E-136 2E-140 1338.4 102.4 952 94-1098 3-1004(1394)
4 KOG0061 Transporter, ABC super 100.0 6.6E-84 1.4E-88 783.9 57.7 585 114-775 21-608 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 1.8E-82 3.8E-87 781.1 60.6 570 162-775 35-613 (617)
6 PLN03211 ABC transporter G-25; 100.0 6.2E-82 1.3E-86 774.8 64.6 609 114-775 35-658 (659)
7 PLN03140 ABC transporter G fam 100.0 1.8E-80 3.8E-85 811.5 64.6 595 111-776 860-1467(1470)
8 KOG0055 Multidrug/pheromone ex 100.0 2.4E-79 5.2E-84 750.4 44.2 792 158-1082 360-1209(1228)
9 KOG0054 Multidrug resistance-a 100.0 2.6E-77 5.6E-82 750.3 48.4 780 164-1084 533-1360(1381)
10 KOG0065 Pleiotropic drug resis 100.0 1.1E-77 2.4E-82 733.1 35.9 584 116-776 779-1384(1391)
11 TIGR00956 3a01205 Pleiotropic 100.0 3.4E-74 7.3E-79 756.5 62.2 559 164-774 775-1389(1394)
12 TIGR01257 rim_protein retinal- 100.0 6E-72 1.3E-76 730.3 69.8 798 165-1082 943-2155(2272)
13 PLN03130 ABC transporter C fam 100.0 6.8E-71 1.5E-75 731.9 52.8 213 842-1083 1236-1458(1622)
14 PLN03232 ABC transporter C fam 100.0 5.3E-70 1.2E-74 724.1 49.5 212 843-1083 1234-1455(1495)
15 COG1123 ATPase components of v 100.0 9.1E-68 2E-72 610.3 49.8 475 165-1082 22-515 (539)
16 PTZ00265 multidrug resistance 100.0 9.3E-68 2E-72 695.7 56.7 217 843-1082 1165-1448(1466)
17 TIGR00957 MRP_assoc_pro multi 100.0 4.7E-68 1E-72 706.4 51.2 213 842-1083 1283-1505(1522)
18 PRK13549 xylose transporter AT 100.0 4.2E-66 9.1E-71 625.0 51.4 459 165-1084 18-492 (506)
19 PRK10261 glutathione transport 100.0 6E-66 1.3E-70 635.3 53.3 503 165-1097 29-569 (623)
20 PRK10762 D-ribose transporter 100.0 8.6E-66 1.9E-70 621.6 50.4 451 165-1084 17-482 (501)
21 PTZ00243 ABC transporter; Prov 100.0 7.2E-66 1.6E-70 683.3 54.3 213 842-1083 1307-1530(1560)
22 TIGR01271 CFTR_protein cystic 100.0 1.6E-65 3.5E-70 680.1 55.3 211 842-1082 1216-1436(1490)
23 PRK09700 D-allose transporter 100.0 1.1E-65 2.4E-70 622.4 48.1 458 165-1081 18-493 (510)
24 PRK15134 microcin C ABC transp 100.0 4E-65 8.7E-70 619.8 51.8 464 165-1082 22-511 (529)
25 PRK15439 autoinducer 2 ABC tra 100.0 5.8E-65 1.3E-69 614.7 50.1 454 165-1083 24-489 (510)
26 TIGR03269 met_CoM_red_A2 methy 100.0 7.3E-65 1.6E-69 616.7 49.3 445 165-1081 13-512 (520)
27 PRK11288 araG L-arabinose tran 100.0 1.6E-64 3.4E-69 610.6 50.3 453 165-1085 17-484 (501)
28 TIGR02633 xylG D-xylose ABC tr 100.0 2.5E-64 5.3E-69 609.6 48.7 458 165-1082 14-488 (500)
29 PRK10982 galactose/methyl gala 100.0 1.8E-63 3.9E-68 600.4 47.9 453 165-1085 11-479 (491)
30 PRK10938 putative molybdenum t 100.0 6.3E-62 1.4E-66 587.1 45.2 446 166-1078 17-484 (490)
31 PRK11819 putative ABC transpor 100.0 1.7E-59 3.8E-64 572.3 53.8 201 843-1080 324-527 (556)
32 COG4172 ABC-type uncharacteriz 100.0 7.8E-60 1.7E-64 510.4 44.8 472 163-1082 21-512 (534)
33 PRK15064 ABC transporter ATP-b 100.0 8.4E-60 1.8E-64 573.3 47.2 198 843-1081 319-520 (530)
34 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.1E-58 2.5E-63 565.2 52.9 201 843-1080 322-525 (552)
35 PRK13409 putative ATPase RIL; 100.0 8.6E-58 1.9E-62 554.8 43.8 214 843-1099 340-557 (590)
36 PRK10636 putative ABC transpor 100.0 3.1E-56 6.7E-61 549.3 54.2 198 843-1082 312-513 (638)
37 PRK11147 ABC transporter ATPas 100.0 1.7E-55 3.8E-60 544.2 57.3 202 843-1081 319-523 (635)
38 COG1129 MglA ABC-type sugar tr 100.0 8.1E-56 1.8E-60 508.3 43.0 450 163-1080 19-484 (500)
39 PLN03073 ABC transporter F fam 100.0 6.4E-54 1.4E-58 529.4 47.2 199 843-1080 508-708 (718)
40 COG0488 Uup ATPase components 100.0 1.4E-52 3.1E-57 495.3 45.8 220 164-413 15-239 (530)
41 COG3845 ABC-type uncharacteriz 100.0 2.8E-51 6.1E-56 459.7 40.1 458 164-1083 16-489 (501)
42 COG1126 GlnQ ABC-type polar am 100.0 3.2E-46 7E-51 377.9 22.7 215 844-1082 3-221 (240)
43 COG1126 GlnQ ABC-type polar am 100.0 2.7E-45 5.8E-50 371.3 20.5 220 164-435 14-238 (240)
44 KOG0061 Transporter, ABC super 100.0 9.7E-45 2.1E-49 441.3 25.4 243 840-1095 22-265 (613)
45 KOG0927 Predicted transporter 100.0 1.3E-43 2.7E-48 398.4 30.9 202 843-1083 389-593 (614)
46 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 5.3E-43 1.1E-47 372.0 24.9 219 843-1084 4-225 (254)
47 COG1135 AbcC ABC-type metal io 100.0 1.7E-43 3.6E-48 375.8 20.9 220 844-1083 2-228 (339)
48 COG1120 FepC ABC-type cobalami 100.0 3.5E-43 7.5E-48 375.6 22.7 227 844-1092 3-236 (258)
49 COG3839 MalK ABC-type sugar tr 100.0 3.2E-43 7E-48 389.9 20.8 217 167-434 18-235 (338)
50 COG1127 Ttg2A ABC-type transpo 100.0 7.5E-43 1.6E-47 358.9 21.8 234 843-1100 8-253 (263)
51 COG1135 AbcC ABC-type metal io 100.0 7.9E-43 1.7E-47 370.7 22.5 224 163-437 17-246 (339)
52 COG1116 TauB ABC-type nitrate/ 100.0 1.1E-42 2.5E-47 363.9 22.4 207 843-1075 3-211 (248)
53 COG3842 PotA ABC-type spermidi 100.0 5.6E-43 1.2E-47 390.0 20.1 224 164-437 17-241 (352)
54 COG1125 OpuBA ABC-type proline 100.0 1.1E-42 2.4E-47 358.3 20.0 208 164-414 13-225 (309)
55 COG1125 OpuBA ABC-type proline 100.0 1.3E-42 2.9E-47 357.7 18.9 215 844-1083 2-222 (309)
56 PLN03211 ABC transporter G-25; 100.0 2.6E-41 5.6E-46 415.8 29.9 253 840-1098 36-304 (659)
57 COG3638 ABC-type phosphate/pho 100.0 5.8E-42 1.3E-46 351.5 20.0 225 843-1088 3-239 (258)
58 COG1118 CysA ABC-type sulfate/ 100.0 5.4E-42 1.2E-46 363.2 19.7 225 163-436 13-241 (345)
59 COG1136 SalX ABC-type antimicr 100.0 1.9E-41 4E-46 355.4 23.4 193 869-1073 18-219 (226)
60 COG1120 FepC ABC-type cobalami 100.0 7.3E-42 1.6E-46 365.4 20.6 210 164-413 14-227 (258)
61 COG1131 CcmA ABC-type multidru 100.0 2.3E-41 4.9E-46 378.1 25.2 212 868-1095 17-231 (293)
62 COG1117 PstB ABC-type phosphat 100.0 9E-42 1.9E-46 343.5 18.4 220 843-1083 7-234 (253)
63 COG1131 CcmA ABC-type multidru 100.0 2.7E-41 5.9E-46 377.4 24.2 212 164-418 17-230 (293)
64 COG2884 FtsE Predicted ATPase 100.0 1.7E-41 3.7E-46 335.6 19.1 215 844-1082 2-222 (223)
65 COG1116 TauB ABC-type nitrate/ 100.0 2.1E-41 4.6E-46 354.4 19.9 194 165-403 16-211 (248)
66 COG1127 Ttg2A ABC-type transpo 100.0 6.3E-41 1.4E-45 344.7 22.7 210 163-414 19-235 (263)
67 COG4555 NatA ABC-type Na+ tran 100.0 1E-41 2.2E-46 339.8 15.8 202 870-1083 16-219 (245)
68 COG4555 NatA ABC-type Na+ tran 100.0 1.7E-41 3.6E-46 338.2 17.1 211 160-414 10-222 (245)
69 COG1118 CysA ABC-type sulfate/ 100.0 2.2E-41 4.8E-46 358.5 18.8 207 867-1083 13-224 (345)
70 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.3E-40 2.8E-45 353.8 23.3 208 166-414 18-227 (254)
71 COG3839 MalK ABC-type sugar tr 100.0 1E-40 2.2E-45 369.9 22.0 229 843-1096 3-237 (338)
72 TIGR00955 3a01204 The Eye Pigm 100.0 1.6E-40 3.5E-45 409.3 25.1 224 867-1095 36-261 (617)
73 COG3842 PotA ABC-type spermidi 100.0 1.1E-40 2.4E-45 371.6 20.6 227 843-1093 5-237 (352)
74 COG1136 SalX ABC-type antimicr 100.0 3.7E-40 7.9E-45 345.7 22.3 196 164-403 17-220 (226)
75 COG3638 ABC-type phosphate/pho 100.0 2.4E-40 5.3E-45 339.5 19.7 217 163-414 15-237 (258)
76 COG1117 PstB ABC-type phosphat 100.0 1.3E-40 2.8E-45 335.2 17.3 222 164-433 19-248 (253)
77 PRK13537 nodulation ABC transp 100.0 2.1E-39 4.5E-44 365.8 26.5 215 843-1082 7-223 (306)
78 TIGR02314 ABC_MetN D-methionin 100.0 3.5E-39 7.5E-44 366.8 27.4 206 165-413 18-229 (343)
79 TIGR03265 PhnT2 putative 2-ami 100.0 2.9E-39 6.2E-44 370.1 26.6 207 165-414 17-224 (353)
80 TIGR02314 ABC_MetN D-methionin 100.0 2.7E-39 5.7E-44 367.7 26.1 218 844-1082 2-226 (343)
81 TIGR03258 PhnT 2-aminoethylpho 100.0 4E-39 8.6E-44 369.4 27.2 208 165-414 18-228 (362)
82 PRK11432 fbpC ferric transport 100.0 3.6E-39 7.8E-44 368.6 26.7 206 165-413 19-225 (351)
83 COG1122 CbiO ABC-type cobalt t 100.0 1.3E-39 2.7E-44 348.9 21.3 214 844-1081 4-223 (235)
84 PRK11650 ugpC glycerol-3-phosp 100.0 3.1E-39 6.6E-44 370.3 24.7 206 165-413 17-223 (356)
85 KOG0058 Peptide exporter, ABC 100.0 8.3E-39 1.8E-43 374.2 27.7 215 842-1083 464-688 (716)
86 COG1122 CbiO ABC-type cobalt t 100.0 3.9E-39 8.4E-44 345.2 22.9 207 165-414 17-228 (235)
87 PRK09452 potA putrescine/sperm 100.0 7.3E-39 1.6E-43 368.4 26.8 218 165-433 27-245 (375)
88 PRK11650 ugpC glycerol-3-phosp 100.0 9.7E-39 2.1E-43 366.2 25.2 216 844-1083 4-221 (356)
89 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-38 3.1E-43 347.2 25.4 214 845-1082 2-222 (235)
90 TIGR01186 proV glycine betaine 100.0 1.1E-38 2.3E-43 364.5 25.4 208 164-414 5-219 (363)
91 COG3840 ThiQ ABC-type thiamine 100.0 3.2E-39 6.9E-44 316.5 17.5 201 170-413 17-218 (231)
92 TIGR03265 PhnT2 putative 2-ami 100.0 1.4E-38 3E-43 364.5 25.6 215 843-1082 4-220 (353)
93 PRK11432 fbpC ferric transport 100.0 1.4E-38 2.9E-43 363.9 25.5 215 843-1082 6-222 (351)
94 PRK13537 nodulation ABC transp 100.0 2.7E-38 5.8E-43 356.8 27.2 206 165-414 20-227 (306)
95 TIGR03258 PhnT 2-aminoethylpho 100.0 2.1E-38 4.5E-43 363.4 25.8 215 843-1082 5-224 (362)
96 PRK13536 nodulation factor exp 100.0 3.2E-38 7E-43 359.6 26.9 216 842-1082 40-257 (340)
97 TIGR01257 rim_protein retinal- 100.0 4.6E-36 1E-40 394.1 50.8 216 842-1081 927-1144(2272)
98 PRK10851 sulfate/thiosulfate t 100.0 3.4E-38 7.3E-43 361.3 26.9 210 165-413 15-225 (353)
99 COG3840 ThiQ ABC-type thiamine 100.0 8.5E-39 1.8E-43 313.5 18.5 213 844-1083 2-216 (231)
100 COG2274 SunT ABC-type bacterio 100.0 2.8E-37 6.2E-42 376.7 36.2 216 840-1083 468-693 (709)
101 COG2884 FtsE Predicted ATPase 100.0 1.2E-38 2.6E-43 315.5 19.0 201 163-407 13-219 (223)
102 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.8E-38 1E-42 339.6 25.5 200 869-1081 17-218 (220)
103 cd03259 ABC_Carb_Solutes_like 100.0 2.9E-38 6.4E-43 339.6 23.7 210 845-1079 2-213 (213)
104 TIGR00960 3a0501s02 Type II (G 100.0 3.3E-38 7.1E-43 339.9 23.7 207 844-1072 2-214 (216)
105 TIGR01188 drrA daunorubicin re 100.0 3E-38 6.5E-43 356.7 24.0 203 868-1082 5-209 (302)
106 PRK10851 sulfate/thiosulfate t 100.0 5.1E-38 1.1E-42 359.8 25.8 217 844-1082 3-222 (353)
107 cd03261 ABC_Org_Solvent_Resist 100.0 7.9E-38 1.7E-42 341.4 25.9 207 165-413 13-225 (235)
108 TIGR01186 proV glycine betaine 100.0 4.9E-38 1.1E-42 359.1 25.0 205 867-1083 4-216 (363)
109 PRK11000 maltose/maltodextrin 100.0 7.9E-38 1.7E-42 361.1 27.0 206 165-413 16-222 (369)
110 COG1124 DppF ABC-type dipeptid 100.0 3.9E-38 8.4E-43 326.2 21.8 205 165-414 20-231 (252)
111 PRK11607 potG putrescine trans 100.0 4.7E-38 1E-42 362.4 24.8 206 165-413 32-238 (377)
112 COG1124 DppF ABC-type dipeptid 100.0 2.4E-38 5.2E-43 327.8 20.0 217 844-1083 4-228 (252)
113 PRK09452 potA putrescine/sperm 100.0 7.4E-38 1.6E-42 360.1 26.0 215 843-1082 14-230 (375)
114 COG1137 YhbG ABC-type (unclass 100.0 5.2E-39 1.1E-43 320.0 13.9 208 866-1083 14-225 (243)
115 KOG0058 Peptide exporter, ABC 100.0 1.8E-38 3.9E-43 371.4 20.7 214 158-414 475-691 (716)
116 cd03265 ABC_DrrA DrrA is the A 100.0 8.4E-38 1.8E-42 337.7 24.4 212 845-1081 2-216 (220)
117 COG0411 LivG ABC-type branched 100.0 1.8E-38 3.9E-43 329.1 18.3 221 163-414 15-239 (250)
118 PRK11153 metN DL-methionine tr 100.0 1.4E-37 3E-42 356.3 27.3 206 165-413 18-229 (343)
119 PRK11153 metN DL-methionine tr 100.0 1.1E-37 2.4E-42 357.1 26.1 218 844-1082 2-226 (343)
120 cd03269 ABC_putative_ATPase Th 100.0 1.2E-37 2.7E-42 334.0 24.6 209 845-1079 2-210 (210)
121 TIGR01288 nodI ATP-binding ABC 100.0 1.2E-37 2.7E-42 351.9 25.8 215 843-1082 4-220 (303)
122 TIGR01188 drrA daunorubicin re 100.0 7.5E-38 1.6E-42 353.5 23.9 206 165-414 6-213 (302)
123 cd03301 ABC_MalK_N The N-termi 100.0 1.2E-37 2.7E-42 334.7 24.4 210 845-1079 2-213 (213)
124 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-37 2.5E-42 360.3 25.8 218 844-1083 4-225 (402)
125 KOG0055 Multidrug/pheromone ex 100.0 7E-38 1.5E-42 385.7 25.3 218 839-1083 346-573 (1228)
126 COG0410 LivF ABC-type branched 100.0 6.3E-38 1.4E-42 322.6 20.7 207 164-414 15-226 (237)
127 PRK11000 maltose/maltodextrin 100.0 1.3E-37 2.9E-42 359.2 26.0 214 844-1082 4-219 (369)
128 PRK11607 potG putrescine trans 100.0 2.1E-37 4.5E-42 357.1 27.3 216 843-1083 19-236 (377)
129 cd03266 ABC_NatA_sodium_export 100.0 1.2E-37 2.5E-42 336.2 23.4 215 844-1079 2-218 (218)
130 cd03219 ABC_Mj1267_LivG_branch 100.0 1.8E-37 4E-42 338.9 24.8 215 845-1081 2-227 (236)
131 PRK13637 cbiO cobalt transport 100.0 1.8E-37 3.8E-42 347.7 25.1 219 844-1082 3-230 (287)
132 PRK13536 nodulation factor exp 100.0 3.4E-37 7.3E-42 351.3 27.7 206 165-414 54-261 (340)
133 cd03296 ABC_CysA_sulfate_impor 100.0 2.8E-37 6E-42 337.9 25.6 218 843-1082 2-222 (239)
134 cd03260 ABC_PstB_phosphate_tra 100.0 1.8E-37 3.9E-42 336.9 24.0 214 845-1082 2-225 (227)
135 cd03218 ABC_YhbG The ABC trans 100.0 2.1E-37 4.7E-42 337.4 24.6 213 845-1082 2-218 (232)
136 cd03226 ABC_cobalt_CbiO_domain 100.0 1.1E-37 2.4E-42 332.9 21.8 192 869-1076 13-205 (205)
137 cd03268 ABC_BcrA_bacitracin_re 100.0 1.9E-37 4.2E-42 332.0 23.3 206 845-1079 2-208 (208)
138 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.8E-37 3.9E-42 334.7 23.2 207 845-1072 2-216 (218)
139 COG4152 ABC-type uncharacteriz 100.0 4.4E-38 9.6E-43 322.2 17.4 224 866-1102 12-247 (300)
140 TIGR03522 GldA_ABC_ATP gliding 100.0 2.8E-37 6.1E-42 348.5 25.6 214 844-1083 3-218 (301)
141 COG0411 LivG ABC-type branched 100.0 5.5E-38 1.2E-42 325.5 18.0 209 866-1083 14-236 (250)
142 cd03258 ABC_MetN_methionine_tr 100.0 2.4E-37 5.2E-42 337.2 24.1 217 844-1081 2-225 (233)
143 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.5E-37 5.4E-42 343.7 24.5 205 866-1082 34-246 (269)
144 cd03256 ABC_PhnC_transporter A 100.0 2.5E-37 5.4E-42 339.0 24.0 205 869-1082 14-230 (241)
145 COG4988 CydD ABC-type transpor 100.0 1.2E-36 2.6E-41 350.3 29.9 217 840-1084 317-541 (559)
146 PRK13647 cbiO cobalt transport 100.0 3.4E-37 7.4E-42 343.3 24.8 216 843-1082 4-223 (274)
147 PRK09493 glnQ glutamine ABC tr 100.0 4.8E-37 1E-41 336.3 25.4 215 844-1082 2-221 (240)
148 TIGR02673 FtsE cell division A 100.0 2.7E-37 5.9E-42 332.3 23.1 206 844-1072 2-213 (214)
149 PRK13651 cobalt transporter AT 100.0 3.2E-37 7E-42 347.2 24.4 220 844-1083 3-251 (305)
150 PRK11629 lolD lipoprotein tran 100.0 6.7E-37 1.5E-41 333.5 26.2 216 844-1081 6-229 (233)
151 cd03258 ABC_MetN_methionine_tr 100.0 6E-37 1.3E-41 334.1 25.7 205 166-413 19-229 (233)
152 PRK13634 cbiO cobalt transport 100.0 5.5E-37 1.2E-41 344.2 26.0 218 165-425 20-249 (290)
153 PRK13637 cbiO cobalt transport 100.0 4.5E-37 9.7E-42 344.4 25.2 218 165-425 20-248 (287)
154 PRK11248 tauB taurine transpor 100.0 6E-37 1.3E-41 337.7 25.8 212 844-1081 2-215 (255)
155 PRK13634 cbiO cobalt transport 100.0 3.8E-37 8.2E-42 345.6 24.4 219 844-1082 3-231 (290)
156 PRK13643 cbiO cobalt transport 100.0 8E-37 1.7E-41 342.6 27.0 224 166-433 20-255 (288)
157 cd03259 ABC_Carb_Solutes_like 100.0 3.2E-37 6.9E-42 331.6 22.7 200 165-407 13-213 (213)
158 cd03292 ABC_FtsE_transporter F 100.0 3.8E-37 8.3E-42 331.2 23.4 205 845-1072 2-212 (214)
159 TIGR01288 nodI ATP-binding ABC 100.0 7.7E-37 1.7E-41 345.4 26.7 206 165-414 17-224 (303)
160 cd03234 ABCG_White The White s 100.0 7.3E-37 1.6E-41 331.7 25.4 221 844-1079 4-226 (226)
161 cd03265 ABC_DrrA DrrA is the A 100.0 4.1E-37 9E-42 332.3 23.3 205 165-412 13-219 (220)
162 cd03296 ABC_CysA_sulfate_impor 100.0 9.5E-37 2.1E-41 333.7 26.3 210 165-413 15-225 (239)
163 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.5E-37 1.2E-41 336.2 24.4 214 845-1082 2-221 (242)
164 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.5E-37 1.8E-41 329.9 25.5 200 165-409 17-218 (220)
165 TIGR02315 ABC_phnC phosphonate 100.0 2.9E-37 6.3E-42 338.8 22.1 219 844-1083 2-232 (243)
166 PRK13631 cbiO cobalt transport 100.0 5.2E-37 1.1E-41 347.5 24.8 219 843-1082 21-261 (320)
167 PRK11264 putative amino-acid A 100.0 7.8E-37 1.7E-41 336.8 25.4 215 844-1082 4-229 (250)
168 cd03263 ABC_subfamily_A The AB 100.0 5.6E-37 1.2E-41 331.4 23.6 213 845-1081 2-216 (220)
169 COG0410 LivF ABC-type branched 100.0 3.3E-37 7.2E-42 317.3 20.5 204 867-1083 14-223 (237)
170 PRK13643 cbiO cobalt transport 100.0 7.1E-37 1.5E-41 343.0 24.9 220 844-1083 2-230 (288)
171 COG4559 ABC-type hemin transpo 100.0 2.8E-37 6E-42 310.4 19.1 208 165-414 14-230 (259)
172 TIGR00960 3a0501s02 Type II (G 100.0 5.4E-37 1.2E-41 330.5 22.8 195 165-403 16-216 (216)
173 COG1137 YhbG ABC-type (unclass 100.0 4.8E-38 1E-42 313.2 13.4 210 163-414 15-228 (243)
174 PRK10908 cell division protein 100.0 8.7E-37 1.9E-41 330.2 24.5 208 844-1075 2-215 (222)
175 cd03224 ABC_TM1139_LivF_branch 100.0 6E-37 1.3E-41 331.6 23.2 199 869-1081 13-216 (222)
176 PRK13650 cbiO cobalt transport 100.0 1.4E-36 3E-41 339.4 26.7 216 165-424 20-242 (279)
177 cd03294 ABC_Pro_Gly_Bertaine T 100.0 9.3E-37 2E-41 339.1 25.1 207 164-413 36-249 (269)
178 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-36 2.6E-41 332.2 25.5 213 844-1082 2-217 (236)
179 COG4175 ProV ABC-type proline/ 100.0 1.8E-37 3.8E-42 328.6 18.2 222 164-436 40-268 (386)
180 COG4559 ABC-type hemin transpo 100.0 3E-37 6.6E-42 310.1 18.9 217 844-1083 2-227 (259)
181 cd03235 ABC_Metallic_Cations A 100.0 5.3E-37 1.1E-41 329.8 22.3 199 869-1079 12-213 (213)
182 cd03219 ABC_Mj1267_LivG_branch 100.0 8.2E-37 1.8E-41 333.7 23.9 215 165-413 13-231 (236)
183 TIGR03522 GldA_ABC_ATP gliding 100.0 1.4E-36 2.9E-41 342.9 26.4 205 165-414 15-221 (301)
184 PRK11831 putative ABC transpor 100.0 1.3E-36 2.9E-41 338.0 25.9 228 843-1094 7-245 (269)
185 PRK13646 cbiO cobalt transport 100.0 7.7E-37 1.7E-41 342.6 24.0 219 844-1082 3-231 (286)
186 PRK13636 cbiO cobalt transport 100.0 1.1E-36 2.5E-41 340.7 25.2 217 843-1083 5-228 (283)
187 PRK10895 lipopolysaccharide AB 100.0 1.1E-36 2.4E-41 333.7 24.4 216 844-1083 4-223 (241)
188 cd03262 ABC_HisP_GlnQ_permease 100.0 8.4E-37 1.8E-41 328.3 23.1 205 845-1072 2-211 (213)
189 cd03264 ABC_drug_resistance_li 100.0 9.5E-37 2.1E-41 327.4 23.4 208 845-1079 2-211 (211)
190 PRK10619 histidine/lysine/argi 100.0 1.8E-36 3.9E-41 335.1 26.2 216 843-1082 5-237 (257)
191 COG2274 SunT ABC-type bacterio 100.0 3.4E-37 7.4E-42 376.0 22.3 207 166-414 487-696 (709)
192 PRK15079 oligopeptide ABC tran 100.0 1.6E-36 3.6E-41 344.8 26.3 245 843-1097 8-267 (331)
193 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 8.4E-37 1.8E-41 329.5 22.7 195 165-403 17-218 (218)
194 PRK13650 cbiO cobalt transport 100.0 9.8E-37 2.1E-41 340.5 23.8 217 843-1082 4-225 (279)
195 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-36 2.4E-41 331.0 23.6 217 844-1079 2-228 (228)
196 cd03225 ABC_cobalt_CbiO_domain 100.0 8.5E-37 1.8E-41 327.8 22.2 193 869-1072 14-210 (211)
197 PRK13647 cbiO cobalt transport 100.0 2.5E-36 5.5E-41 336.3 26.8 203 166-412 19-225 (274)
198 PRK14268 phosphate ABC transpo 100.0 2.4E-36 5.1E-41 334.2 26.3 215 843-1082 12-238 (258)
199 PRK13651 cobalt transporter AT 100.0 1.7E-36 3.6E-41 341.5 25.5 216 165-424 20-267 (305)
200 cd03301 ABC_MalK_N The N-termi 100.0 1.3E-36 2.8E-41 326.9 23.4 200 165-407 13-213 (213)
201 PRK11629 lolD lipoprotein tran 100.0 3E-36 6.5E-41 328.5 26.3 201 165-409 22-229 (233)
202 cd03218 ABC_YhbG The ABC trans 100.0 1.5E-36 3.3E-41 330.7 24.0 205 165-413 13-221 (232)
203 PRK10070 glycine betaine trans 100.0 1.4E-36 3E-41 351.1 25.0 206 165-413 41-253 (400)
204 PRK11247 ssuB aliphatic sulfon 100.0 1.5E-36 3.3E-41 334.0 24.1 207 843-1082 12-219 (257)
205 TIGR03740 galliderm_ABC gallid 100.0 2.7E-36 5.8E-41 326.7 25.4 207 869-1093 13-219 (223)
206 cd03266 ABC_NatA_sodium_export 100.0 1.8E-36 3.9E-41 327.0 23.8 198 166-407 19-218 (218)
207 TIGR02211 LolD_lipo_ex lipopro 100.0 2.1E-36 4.7E-41 327.1 24.4 211 844-1076 2-220 (221)
208 PRK13641 cbiO cobalt transport 100.0 1.8E-36 3.9E-41 339.8 24.6 219 844-1082 3-230 (287)
209 cd03263 ABC_subfamily_A The AB 100.0 1.3E-36 2.8E-41 328.5 22.5 203 165-412 15-219 (220)
210 TIGR00972 3a0107s01c2 phosphat 100.0 2.9E-36 6.4E-41 331.5 25.5 215 844-1082 2-228 (247)
211 TIGR03005 ectoine_ehuA ectoine 100.0 2.6E-36 5.6E-41 332.9 25.1 215 844-1082 1-232 (252)
212 PRK11831 putative ABC transpor 100.0 4.2E-36 9.1E-41 334.0 26.8 207 165-413 20-232 (269)
213 COG4525 TauB ABC-type taurine 100.0 8.3E-37 1.8E-41 302.4 18.5 201 869-1082 18-220 (259)
214 TIGR03415 ABC_choXWV_ATP choli 100.0 2E-36 4.2E-41 347.3 24.6 208 163-413 35-253 (382)
215 PRK11300 livG leucine/isoleuci 100.0 2.7E-36 5.9E-41 333.5 24.9 219 843-1083 5-240 (255)
216 TIGR03411 urea_trans_UrtD urea 100.0 3.2E-36 6.9E-41 330.3 25.0 226 844-1092 3-239 (242)
217 PRK13644 cbiO cobalt transport 100.0 2.1E-36 4.6E-41 336.9 23.7 214 844-1082 2-220 (274)
218 PRK13646 cbiO cobalt transport 100.0 3.8E-36 8.3E-41 337.0 25.8 206 165-413 20-234 (286)
219 cd03224 ABC_TM1139_LivF_branch 100.0 2.2E-36 4.9E-41 327.2 23.0 203 165-413 13-220 (222)
220 PRK11614 livF leucine/isoleuci 100.0 2.3E-36 5.1E-41 330.2 23.2 214 843-1083 5-223 (237)
221 PRK13652 cbiO cobalt transport 100.0 3.6E-36 7.8E-41 335.8 25.1 216 844-1083 4-224 (277)
222 cd03269 ABC_putative_ATPase Th 100.0 1.9E-36 4.2E-41 324.7 22.0 198 165-407 13-210 (210)
223 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3E-36 6.6E-41 330.3 24.0 206 165-413 14-224 (242)
224 PRK14247 phosphate ABC transpo 100.0 5.1E-36 1.1E-40 330.3 25.8 217 844-1082 4-230 (250)
225 TIGR01978 sufC FeS assembly AT 100.0 4.1E-36 8.9E-41 329.7 25.0 218 845-1081 2-229 (243)
226 cd03256 ABC_PhnC_transporter A 100.0 2.6E-36 5.6E-41 330.9 23.3 214 165-413 14-233 (241)
227 PRK09536 btuD corrinoid ABC tr 100.0 3.4E-36 7.3E-41 348.1 25.4 209 165-413 16-227 (402)
228 PRK11124 artP arginine transpo 100.0 4.4E-36 9.5E-41 329.2 25.0 214 844-1082 3-226 (242)
229 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.5E-36 1.6E-40 326.0 26.6 206 165-414 14-221 (236)
230 cd03298 ABC_ThiQ_thiamine_tran 100.0 3E-36 6.5E-41 323.5 23.1 194 874-1079 16-211 (211)
231 PRK09493 glnQ glutamine ABC tr 100.0 6.4E-36 1.4E-40 327.4 26.1 205 165-413 14-224 (240)
232 PRK10070 glycine betaine trans 100.0 3E-36 6.5E-41 348.3 24.6 204 867-1082 39-250 (400)
233 PRK11231 fecE iron-dicitrate t 100.0 4.3E-36 9.2E-41 331.7 24.7 228 844-1093 3-236 (255)
234 PRK13548 hmuV hemin importer A 100.0 4.7E-36 1E-40 331.5 25.1 215 844-1083 3-227 (258)
235 PRK14267 phosphate ABC transpo 100.0 5.7E-36 1.2E-40 330.5 25.4 218 843-1082 4-233 (253)
236 PRK14273 phosphate ABC transpo 100.0 6.1E-36 1.3E-40 330.4 25.6 216 843-1082 7-234 (254)
237 cd03260 ABC_PstB_phosphate_tra 100.0 1.9E-36 4.2E-41 328.7 21.3 204 165-411 13-226 (227)
238 PRK13631 cbiO cobalt transport 100.0 3.6E-36 7.9E-41 340.7 24.2 218 165-426 39-280 (320)
239 cd03234 ABCG_White The White s 100.0 4.5E-36 9.8E-41 325.5 24.0 203 164-407 19-226 (226)
240 PRK11264 putative amino-acid A 100.0 6.5E-36 1.4E-40 329.5 25.4 204 166-413 17-232 (250)
241 PRK11022 dppD dipeptide transp 100.0 8.8E-36 1.9E-40 338.8 27.1 224 844-1082 4-239 (326)
242 TIGR03415 ABC_choXWV_ATP choli 100.0 4.4E-36 9.5E-41 344.4 24.7 205 867-1083 35-251 (382)
243 PRK09984 phosphonate/organopho 100.0 6.2E-36 1.3E-40 331.7 25.0 221 843-1083 4-239 (262)
244 PRK13635 cbiO cobalt transport 100.0 7.6E-36 1.7E-40 333.1 25.8 216 165-424 20-242 (279)
245 PRK13635 cbiO cobalt transport 100.0 4.4E-36 9.5E-41 335.1 23.8 215 844-1082 6-225 (279)
246 PRK15079 oligopeptide ABC tran 100.0 5.1E-36 1.1E-40 340.7 24.7 208 165-413 34-250 (331)
247 cd03268 ABC_BcrA_bacitracin_re 100.0 3.3E-36 7.2E-41 322.4 21.7 195 165-407 13-208 (208)
248 PRK14245 phosphate ABC transpo 100.0 1.1E-35 2.3E-40 327.7 26.1 220 843-1082 3-230 (250)
249 KOG0062 ATPase component of AB 100.0 5E-36 1.1E-40 335.6 23.7 204 841-1081 360-564 (582)
250 PRK13639 cbiO cobalt transport 100.0 7.2E-36 1.6E-40 333.1 24.9 215 844-1082 2-222 (275)
251 PRK14241 phosphate transporter 100.0 1.1E-35 2.3E-40 329.1 26.0 218 843-1082 4-238 (258)
252 PRK14237 phosphate transporter 100.0 1.5E-35 3.3E-40 329.2 27.2 223 840-1082 17-247 (267)
253 TIGR02315 ABC_phnC phosphonate 100.0 3.2E-36 6.8E-41 330.6 21.5 213 165-412 15-233 (243)
254 PRK13636 cbiO cobalt transport 100.0 1E-35 2.2E-40 333.1 26.0 207 165-414 19-231 (283)
255 PRK10575 iron-hydroxamate tran 100.0 7.4E-36 1.6E-40 331.4 24.7 219 843-1083 11-234 (265)
256 PRK10253 iron-enterobactin tra 100.0 7.1E-36 1.5E-40 331.6 24.4 219 843-1083 7-230 (265)
257 cd03232 ABC_PDR_domain2 The pl 100.0 6.9E-36 1.5E-40 315.4 23.1 190 843-1079 3-192 (192)
258 PRK11308 dppF dipeptide transp 100.0 1.1E-35 2.5E-40 337.7 26.5 226 843-1082 5-240 (327)
259 cd03233 ABC_PDR_domain1 The pl 100.0 6.8E-36 1.5E-40 317.9 23.2 180 163-407 18-202 (202)
260 TIGR02211 LolD_lipo_ex lipopro 100.0 9.2E-36 2E-40 322.1 24.5 196 165-404 18-220 (221)
261 PRK13638 cbiO cobalt transport 100.0 6E-36 1.3E-40 333.3 23.7 214 844-1082 2-221 (271)
262 PRK10584 putative ABC transpor 100.0 1.2E-35 2.7E-40 322.6 25.6 213 843-1077 6-226 (228)
263 PRK15093 antimicrobial peptide 100.0 1.1E-35 2.4E-40 339.1 26.4 241 844-1097 4-264 (330)
264 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6E-35 1.3E-39 366.4 35.6 209 843-1082 451-669 (686)
265 PRK10744 pstB phosphate transp 100.0 1.3E-35 2.8E-40 328.7 25.9 217 842-1082 12-240 (260)
266 TIGR01277 thiQ thiamine ABC tr 100.0 8E-36 1.7E-40 320.5 23.6 198 871-1080 13-212 (213)
267 PRK11248 tauB taurine transpor 100.0 1.3E-35 2.8E-40 327.2 25.7 201 165-410 14-216 (255)
268 PRK13649 cbiO cobalt transport 100.0 9.1E-36 2E-40 333.6 24.9 219 844-1082 3-230 (280)
269 cd03226 ABC_cobalt_CbiO_domain 100.0 3.3E-36 7.1E-41 321.7 20.3 192 165-404 13-205 (205)
270 PRK14256 phosphate ABC transpo 100.0 2.2E-35 4.8E-40 325.5 27.5 236 843-1097 4-252 (252)
271 TIGR03410 urea_trans_UrtE urea 100.0 5.7E-36 1.2E-40 325.7 22.5 212 845-1084 2-219 (230)
272 COG4988 CydD ABC-type transpor 100.0 2.9E-36 6.3E-41 347.1 21.2 200 166-414 335-543 (559)
273 PRK09473 oppD oligopeptide tra 100.0 1.3E-35 2.9E-40 337.5 26.4 225 843-1082 12-247 (330)
274 PRK10771 thiQ thiamine transpo 100.0 7.4E-36 1.6E-40 325.2 23.2 225 844-1095 2-230 (232)
275 PRK11308 dppF dipeptide transp 100.0 1.5E-35 3.3E-40 336.6 26.7 208 165-414 28-244 (327)
276 TIGR02769 nickel_nikE nickel i 100.0 1.1E-35 2.4E-40 330.0 25.0 224 844-1082 3-236 (265)
277 cd03257 ABC_NikE_OppD_transpor 100.0 1.4E-35 3E-40 322.4 25.2 201 166-407 19-228 (228)
278 cd03300 ABC_PotA_N PotA is an 100.0 1.2E-35 2.6E-40 323.4 24.8 212 845-1081 2-215 (232)
279 TIGR02673 FtsE cell division A 100.0 9.9E-36 2.1E-40 320.2 23.7 194 165-402 15-214 (214)
280 KOG0057 Mitochondrial Fe/S clu 100.0 1.6E-36 3.6E-41 342.9 18.3 212 841-1082 349-570 (591)
281 PRK14242 phosphate transporter 100.0 1.5E-35 3.3E-40 327.1 25.7 220 843-1082 6-233 (253)
282 TIGR03873 F420-0_ABC_ATP propo 100.0 9.6E-36 2.1E-40 329.1 24.1 218 844-1083 2-223 (256)
283 cd03264 ABC_drug_resistance_li 100.0 5.6E-36 1.2E-40 321.4 21.5 196 166-407 14-211 (211)
284 COG4175 ProV ABC-type proline/ 100.0 2.6E-36 5.6E-41 319.7 18.3 203 869-1083 41-251 (386)
285 PRK09473 oppD oligopeptide tra 100.0 1.9E-35 4E-40 336.3 26.6 214 165-414 29-251 (330)
286 PRK14269 phosphate ABC transpo 100.0 1.5E-35 3.2E-40 325.6 24.8 220 844-1082 3-226 (246)
287 PRK13632 cbiO cobalt transport 100.0 1.6E-35 3.6E-40 329.6 25.5 205 165-413 22-230 (271)
288 PRK11247 ssuB aliphatic sulfon 100.0 1.1E-35 2.4E-40 327.2 23.6 194 166-410 26-219 (257)
289 PRK13633 cobalt transporter AT 100.0 1.9E-35 4.1E-40 330.5 25.9 206 165-414 23-233 (280)
290 PRK11022 dppD dipeptide transp 100.0 1.8E-35 3.9E-40 336.2 26.0 211 165-414 20-243 (326)
291 COG0444 DppD ABC-type dipeptid 100.0 1.7E-35 3.6E-40 320.4 24.4 209 868-1082 17-239 (316)
292 PRK11614 livF leucine/isoleuci 100.0 1.4E-35 3E-40 324.1 24.2 203 165-413 18-225 (237)
293 cd03233 ABC_PDR_domain1 The pl 100.0 1.4E-35 3.1E-40 315.4 23.6 196 843-1079 3-202 (202)
294 cd03267 ABC_NatA_like Similar 100.0 1.7E-35 3.7E-40 322.8 24.7 202 163-407 32-236 (236)
295 PRK14257 phosphate ABC transpo 100.0 2E-35 4.4E-40 335.5 26.3 223 843-1083 80-310 (329)
296 PRK15112 antimicrobial peptide 100.0 1.3E-35 2.9E-40 329.6 24.2 242 844-1100 5-258 (267)
297 KOG0057 Mitochondrial Fe/S clu 100.0 4.2E-36 9.1E-41 339.6 20.2 229 110-414 343-574 (591)
298 PRK13549 xylose transporter AT 100.0 1.2E-35 2.6E-40 359.7 25.7 221 844-1084 6-230 (506)
299 PRK14250 phosphate ABC transpo 100.0 1.1E-35 2.4E-40 325.4 23.1 210 843-1082 3-217 (241)
300 cd03292 ABC_FtsE_transporter F 100.0 7.2E-36 1.6E-40 321.3 21.2 195 165-403 14-214 (214)
301 TIGR00968 3a0106s01 sulfate AB 100.0 1.4E-35 3.1E-40 323.7 23.8 229 845-1098 2-233 (237)
302 PRK13640 cbiO cobalt transport 100.0 1.2E-35 2.6E-40 332.3 23.6 218 843-1082 5-228 (282)
303 TIGR00972 3a0107s01c2 phosphat 100.0 2.6E-35 5.5E-40 324.0 25.8 206 166-413 15-231 (247)
304 PRK10584 putative ABC transpor 100.0 3E-35 6.5E-40 319.6 26.1 198 165-406 23-227 (228)
305 COG4181 Predicted ABC-type tra 100.0 7.6E-36 1.6E-40 289.6 18.8 198 867-1077 21-226 (228)
306 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.9E-35 1.5E-39 367.5 33.3 211 842-1082 476-696 (710)
307 COG4525 TauB ABC-type taurine 100.0 9.3E-36 2E-40 294.9 19.8 205 165-414 18-224 (259)
308 PRK13644 cbiO cobalt transport 100.0 1.6E-35 3.6E-40 329.8 24.4 204 165-413 15-223 (274)
309 TIGR01184 ntrCD nitrate transp 100.0 9.3E-36 2E-40 323.6 21.9 198 872-1081 1-199 (230)
310 PRK14235 phosphate transporter 100.0 2.7E-35 5.8E-40 327.2 26.0 217 843-1082 19-247 (267)
311 PRK13641 cbiO cobalt transport 100.0 1.2E-35 2.5E-40 333.2 23.2 205 165-413 20-233 (287)
312 PRK11144 modC molybdate transp 100.0 9E-36 1.9E-40 342.5 22.8 195 170-413 16-217 (352)
313 PRK13648 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 328.5 25.0 217 843-1083 7-228 (269)
314 PRK14259 phosphate ABC transpo 100.0 1.5E-35 3.3E-40 329.3 23.8 216 843-1083 13-250 (269)
315 PRK13633 cobalt transporter AT 100.0 1.5E-35 3.3E-40 331.3 23.9 220 843-1082 4-229 (280)
316 PRK13649 cbiO cobalt transport 100.0 4.7E-35 1E-39 327.8 27.9 205 165-413 20-233 (280)
317 PRK13547 hmuV hemin importer A 100.0 1.9E-35 4E-40 328.1 24.4 220 844-1083 2-241 (272)
318 PRK13548 hmuV hemin importer A 100.0 2.7E-35 5.8E-40 325.5 25.3 206 165-413 15-229 (258)
319 TIGR03005 ectoine_ehuA ectoine 100.0 2.7E-35 5.9E-40 324.8 25.3 206 165-413 13-235 (252)
320 PRK13632 cbiO cobalt transport 100.0 1.7E-35 3.7E-40 329.4 23.8 216 843-1082 7-227 (271)
321 PRK13645 cbiO cobalt transport 100.0 1.8E-35 3.8E-40 332.5 24.1 220 843-1082 6-236 (289)
322 PRK14274 phosphate ABC transpo 100.0 3.1E-35 6.7E-40 325.6 25.6 216 843-1082 12-239 (259)
323 PRK14268 phosphate ABC transpo 100.0 4.2E-35 9.1E-40 324.2 26.6 206 165-413 25-241 (258)
324 PRK00635 excinuclease ABC subu 100.0 5.4E-34 1.2E-38 369.0 41.0 134 941-1082 760-902 (1809)
325 PRK14270 phosphate ABC transpo 100.0 3E-35 6.5E-40 324.2 25.2 228 843-1094 4-248 (251)
326 cd03267 ABC_NatA_like Similar 100.0 2.4E-35 5.2E-40 321.6 24.1 202 866-1079 31-236 (236)
327 PRK11300 livG leucine/isoleuci 100.0 4.3E-35 9.3E-40 324.0 26.3 221 165-413 18-242 (255)
328 PRK14260 phosphate ABC transpo 100.0 3.3E-35 7.1E-40 325.3 25.3 217 843-1082 7-239 (259)
329 PRK10895 lipopolysaccharide AB 100.0 1.9E-35 4.1E-40 323.9 23.1 206 165-413 16-225 (241)
330 TIGR03608 L_ocin_972_ABC putat 100.0 2E-35 4.3E-40 316.0 22.6 189 869-1069 11-206 (206)
331 TIGR02142 modC_ABC molybdenum 100.0 2.1E-35 4.6E-40 340.0 24.3 199 170-413 15-220 (354)
332 PRK13638 cbiO cobalt transport 100.0 5.1E-35 1.1E-39 325.8 26.5 205 165-413 14-224 (271)
333 PRK11124 artP arginine transpo 100.0 3.4E-35 7.4E-40 322.1 24.7 203 166-412 16-228 (242)
334 PRK13642 cbiO cobalt transport 100.0 2.4E-35 5.3E-40 329.1 23.9 217 843-1082 4-225 (277)
335 TIGR02770 nickel_nikD nickel i 100.0 2.3E-35 5E-40 320.7 23.0 204 167-413 1-214 (230)
336 COG1245 Predicted ATPase, RNas 100.0 1.6E-34 3.4E-39 318.2 29.6 173 872-1070 357-530 (591)
337 PRK14239 phosphate transporter 100.0 3.8E-35 8.3E-40 323.8 25.1 217 843-1083 5-233 (252)
338 PRK13652 cbiO cobalt transport 100.0 2.3E-35 5.1E-40 329.3 23.6 205 166-413 18-226 (277)
339 PRK11174 cysteine/glutathione 100.0 1.7E-35 3.8E-40 365.5 25.0 207 165-414 363-572 (588)
340 PRK13640 cbiO cobalt transport 100.0 4.4E-35 9.6E-40 327.7 25.8 209 165-414 20-232 (282)
341 TIGR03410 urea_trans_UrtE urea 100.0 2E-35 4.3E-40 321.5 22.4 202 165-412 13-219 (230)
342 PRK10619 histidine/lysine/argi 100.0 5E-35 1.1E-39 323.6 25.9 205 165-413 18-240 (257)
343 PRK14273 phosphate ABC transpo 100.0 5.2E-35 1.1E-39 322.9 25.8 206 166-413 21-237 (254)
344 PRK14250 phosphate ABC transpo 100.0 4.1E-35 8.8E-40 321.0 24.7 200 166-413 17-220 (241)
345 cd03299 ABC_ModC_like Archeal 100.0 4.5E-35 9.7E-40 319.4 24.7 200 871-1082 14-215 (235)
346 COG0444 DppD ABC-type dipeptid 100.0 4.8E-35 1E-39 316.9 24.6 215 164-413 17-242 (316)
347 TIGR03411 urea_trans_UrtD urea 100.0 3.7E-35 8E-40 321.9 24.1 212 165-413 15-230 (242)
348 PRK10908 cell division protein 100.0 2.6E-35 5.7E-40 318.7 22.5 196 165-404 15-216 (222)
349 TIGR01184 ntrCD nitrate transp 100.0 2.2E-35 4.7E-40 320.7 21.9 202 168-412 1-202 (230)
350 PRK11144 modC molybdate transp 100.0 3.4E-35 7.5E-40 337.7 24.7 192 874-1083 16-215 (352)
351 TIGR01193 bacteriocin_ABC ABC- 100.0 7.3E-35 1.6E-39 366.9 29.9 210 843-1081 473-692 (708)
352 PRK14240 phosphate transporter 100.0 5.7E-35 1.2E-39 321.9 25.4 216 843-1082 3-230 (250)
353 PRK13639 cbiO cobalt transport 100.0 4.9E-35 1.1E-39 326.3 25.1 204 166-413 16-225 (275)
354 PRK14247 phosphate ABC transpo 100.0 7.4E-35 1.6E-39 321.0 26.2 209 165-413 16-233 (250)
355 PRK14242 phosphate transporter 100.0 7.9E-35 1.7E-39 321.4 26.4 203 166-413 20-236 (253)
356 PRK14244 phosphate ABC transpo 100.0 5.4E-35 1.2E-39 322.2 25.0 219 845-1082 7-233 (251)
357 TIGR02769 nickel_nikE nickel i 100.0 4.2E-35 9E-40 325.4 24.1 208 164-413 23-239 (265)
358 cd03300 ABC_PotA_N PotA is an 100.0 8.3E-35 1.8E-39 316.8 26.0 206 165-413 13-219 (232)
359 PRK15093 antimicrobial peptide 100.0 6E-35 1.3E-39 333.1 26.0 214 165-413 20-247 (330)
360 PRK14272 phosphate ABC transpo 100.0 7.3E-35 1.6E-39 321.5 25.7 217 843-1082 4-232 (252)
361 cd03213 ABCG_EPDR ABCG transpo 100.0 4.9E-35 1.1E-39 309.4 23.2 190 843-1079 3-194 (194)
362 TIGR02142 modC_ABC molybdenum 100.0 3E-35 6.5E-40 338.7 23.5 195 874-1082 15-217 (354)
363 PRK13648 cbiO cobalt transport 100.0 5.1E-35 1.1E-39 325.4 24.4 215 166-424 23-244 (269)
364 COG4604 CeuD ABC-type enteroch 100.0 2.4E-36 5.2E-41 299.8 12.1 218 866-1093 11-234 (252)
365 PRK14248 phosphate ABC transpo 100.0 5.6E-35 1.2E-39 325.1 24.5 229 843-1095 21-266 (268)
366 PRK10575 iron-hydroxamate tran 100.0 5E-35 1.1E-39 324.8 24.0 209 166-413 25-236 (265)
367 cd03225 ABC_cobalt_CbiO_domain 100.0 3E-35 6.5E-40 315.8 21.5 194 165-402 14-211 (211)
368 PRK14267 phosphate ABC transpo 100.0 8.3E-35 1.8E-39 321.2 25.6 208 166-413 18-236 (253)
369 PRK14271 phosphate ABC transpo 100.0 1.3E-34 2.9E-39 322.6 27.4 238 843-1100 21-270 (276)
370 PRK10762 D-ribose transporter 100.0 4.4E-35 9.5E-40 354.3 25.5 227 844-1092 5-237 (501)
371 PRK11174 cysteine/glutathione 100.0 1.1E-35 2.4E-40 367.3 20.7 211 842-1082 348-568 (588)
372 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 6.3E-35 1.4E-39 315.7 23.8 194 865-1079 31-224 (224)
373 cd03297 ABC_ModC_molybdenum_tr 100.0 4.6E-35 1E-39 314.9 22.6 195 868-1079 12-214 (214)
374 PRK13642 cbiO cobalt transport 100.0 1.2E-34 2.5E-39 323.7 26.6 205 165-413 20-228 (277)
375 PRK00349 uvrA excinuclease ABC 100.0 1.1E-33 2.4E-38 353.9 38.3 123 944-1082 792-923 (943)
376 PRK14262 phosphate ABC transpo 100.0 9.7E-35 2.1E-39 320.1 25.6 215 844-1082 4-230 (250)
377 PRK14258 phosphate ABC transpo 100.0 9.5E-35 2.1E-39 321.8 25.7 222 843-1082 7-241 (261)
378 PRK11701 phnK phosphonate C-P 100.0 8.6E-35 1.9E-39 321.9 25.0 216 843-1082 6-237 (258)
379 TIGR03740 galliderm_ABC gallid 100.0 6.1E-35 1.3E-39 316.1 23.2 197 165-410 13-209 (223)
380 TIGR02982 heterocyst_DevA ABC 100.0 7E-35 1.5E-39 314.8 23.5 211 844-1075 2-219 (220)
381 PRK14253 phosphate ABC transpo 100.0 1E-34 2.2E-39 319.7 25.2 220 843-1082 3-229 (249)
382 PRK10253 iron-enterobactin tra 100.0 8.6E-35 1.9E-39 322.9 24.7 210 165-413 20-232 (265)
383 PRK10418 nikD nickel transport 100.0 9.9E-35 2.1E-39 320.5 25.1 215 842-1082 3-226 (254)
384 PRK09984 phosphonate/organopho 100.0 7.9E-35 1.7E-39 322.9 24.4 216 165-412 17-240 (262)
385 PRK14249 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 319.2 25.9 220 843-1082 4-231 (251)
386 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.2E-35 9E-40 314.6 21.3 195 170-407 16-211 (211)
387 cd03299 ABC_ModC_like Archeal 100.0 9.6E-35 2.1E-39 316.8 24.4 204 167-413 14-218 (235)
388 TIGR02770 nickel_nikD nickel i 100.0 5.9E-35 1.3E-39 317.5 22.5 202 871-1082 1-211 (230)
389 PRK15056 manganese/iron transp 100.0 7.5E-35 1.6E-39 324.5 23.9 219 843-1083 6-227 (272)
390 TIGR01978 sufC FeS assembly AT 100.0 1.2E-34 2.6E-39 318.2 25.1 213 165-413 13-233 (243)
391 PRK10419 nikE nickel transport 100.0 1.9E-34 4.2E-39 320.3 27.0 225 844-1083 4-238 (268)
392 cd03235 ABC_Metallic_Cations A 100.0 3.6E-35 7.8E-40 315.6 20.4 200 165-407 12-213 (213)
393 PRK14236 phosphate transporter 100.0 1.8E-34 3.9E-39 321.5 26.6 216 843-1082 25-252 (272)
394 PRK09700 D-allose transporter 100.0 6.3E-35 1.4E-39 353.9 25.0 218 844-1083 6-231 (510)
395 PRK14257 phosphate ABC transpo 100.0 1.4E-34 3E-39 328.8 26.1 211 165-413 95-312 (329)
396 PRK10744 pstB phosphate transp 100.0 1.5E-34 3.4E-39 320.1 25.9 205 166-413 27-243 (260)
397 TIGR03375 type_I_sec_LssB type 100.0 4.7E-34 1E-38 358.7 33.5 212 842-1081 462-683 (694)
398 PRK14235 phosphate transporter 100.0 1.6E-34 3.4E-39 321.0 25.8 207 166-413 33-250 (267)
399 PRK11231 fecE iron-dicitrate t 100.0 1E-34 2.2E-39 320.8 24.0 209 165-413 15-226 (255)
400 TIGR03873 F420-0_ABC_ATP propo 100.0 1.3E-34 2.7E-39 320.2 24.8 208 165-413 14-225 (256)
401 PRK14263 phosphate ABC transpo 100.0 1.8E-34 4E-39 319.1 26.0 220 842-1082 7-241 (261)
402 PRK13543 cytochrome c biogenes 100.0 9.2E-35 2E-39 312.4 23.0 201 843-1070 11-211 (214)
403 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.7E-35 5.8E-40 326.3 19.2 212 843-1083 2-222 (275)
404 PRK13645 cbiO cobalt transport 100.0 6.5E-35 1.4E-39 327.9 22.6 206 165-413 24-239 (289)
405 PRK14251 phosphate ABC transpo 100.0 1.6E-34 3.5E-39 318.6 25.1 216 843-1082 4-231 (251)
406 PRK14238 phosphate transporter 100.0 1.2E-34 2.6E-39 322.5 24.3 216 843-1082 24-251 (271)
407 PRK14255 phosphate ABC transpo 100.0 2E-34 4.3E-39 318.0 25.8 216 843-1082 5-232 (252)
408 PRK14275 phosphate ABC transpo 100.0 1.7E-34 3.6E-39 323.5 25.5 216 843-1082 39-266 (286)
409 TIGR00958 3a01208 Conjugate Tr 100.0 5.2E-34 1.1E-38 357.8 32.8 211 843-1082 478-698 (711)
410 PRK14265 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 322.3 24.6 217 842-1083 19-255 (274)
411 PRK14270 phosphate ABC transpo 100.0 2.5E-34 5.4E-39 317.0 26.2 207 165-413 17-234 (251)
412 PRK14254 phosphate ABC transpo 100.0 2.9E-34 6.2E-39 321.2 27.0 214 843-1082 39-265 (285)
413 PRK15112 antimicrobial peptide 100.0 1.1E-34 2.4E-39 322.3 23.5 207 165-413 26-238 (267)
414 TIGR02633 xylG D-xylose ABC tr 100.0 1.2E-34 2.7E-39 350.7 25.9 220 844-1083 2-227 (500)
415 PRK14261 phosphate ABC transpo 100.0 2E-34 4.3E-39 318.1 25.3 216 843-1082 6-233 (253)
416 TIGR01277 thiQ thiamine ABC tr 100.0 1.3E-34 2.9E-39 311.0 23.2 199 167-408 13-212 (213)
417 PRK10771 thiQ thiamine transpo 100.0 1.1E-34 2.5E-39 315.8 22.8 202 170-414 17-219 (232)
418 TIGR01846 type_I_sec_HlyB type 100.0 1E-33 2.3E-38 355.4 34.8 213 842-1082 454-676 (694)
419 PRK14241 phosphate transporter 100.0 2.4E-34 5.3E-39 318.3 25.7 207 166-413 18-241 (258)
420 cd03252 ABCC_Hemolysin The ABC 100.0 3.5E-35 7.6E-40 321.0 18.8 210 845-1082 2-221 (237)
421 TIGR00968 3a0106s01 sulfate AB 100.0 1.8E-34 3.8E-39 315.2 24.1 206 165-413 13-219 (237)
422 COG4148 ModC ABC-type molybdat 100.0 1.4E-35 3E-40 309.1 14.4 196 170-414 16-218 (352)
423 cd03262 ABC_HisP_GlnQ_permease 100.0 7.2E-35 1.6E-39 313.3 20.4 195 165-403 13-213 (213)
424 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-34 2.8E-39 350.4 25.1 212 843-1083 11-226 (510)
425 PRK14237 phosphate transporter 100.0 4.5E-34 9.8E-39 317.4 27.4 211 165-413 33-250 (267)
426 PRK14269 phosphate ABC transpo 100.0 3E-34 6.5E-39 315.3 25.6 205 165-413 15-229 (246)
427 cd03231 ABC_CcmA_heme_exporter 100.0 1E-34 2.3E-39 308.8 21.1 184 869-1069 13-198 (201)
428 PRK10418 nikD nickel transport 100.0 4.1E-34 9E-39 315.6 26.6 203 166-413 17-229 (254)
429 PRK14256 phosphate ABC transpo 100.0 4E-34 8.6E-39 315.5 26.4 208 165-413 17-235 (252)
430 COG1132 MdlB ABC-type multidru 100.0 2.8E-35 6E-40 361.8 19.0 213 842-1083 327-549 (567)
431 PRK11701 phnK phosphonate C-P 100.0 3.7E-34 8E-39 316.8 26.1 207 165-413 19-240 (258)
432 PRK13538 cytochrome c biogenes 100.0 1.3E-34 2.9E-39 308.8 21.8 199 844-1069 2-202 (204)
433 PRK14245 phosphate ABC transpo 100.0 3.4E-34 7.4E-39 315.7 25.7 206 165-413 16-233 (250)
434 PRK11288 araG L-arabinose tran 100.0 1.7E-34 3.7E-39 349.1 25.4 215 844-1080 5-223 (501)
435 COG1132 MdlB ABC-type multidru 100.0 1.1E-34 2.3E-39 356.6 23.9 209 164-414 341-552 (567)
436 CHL00131 ycf16 sulfate ABC tra 100.0 3.3E-34 7.1E-39 316.3 25.4 221 843-1082 7-237 (252)
437 COG1129 MglA ABC-type sugar tr 100.0 1.3E-34 2.7E-39 333.5 22.9 216 867-1091 19-241 (500)
438 PRK10982 galactose/methyl gala 100.0 1.6E-34 3.6E-39 348.7 25.0 207 868-1083 10-220 (491)
439 PRK14239 phosphate transporter 100.0 5.2E-34 1.1E-38 314.8 26.7 206 166-413 19-235 (252)
440 PRK14274 phosphate ABC transpo 100.0 4.2E-34 9.2E-39 316.5 26.0 206 166-413 26-242 (259)
441 cd03230 ABC_DR_subfamily_A Thi 100.0 1.6E-34 3.5E-39 299.9 21.2 168 845-1072 2-171 (173)
442 PRK10247 putative ABC transpor 100.0 1.6E-34 3.6E-39 312.9 22.1 210 843-1080 7-221 (225)
443 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.3E-35 1.4E-39 366.2 21.6 205 165-414 466-673 (686)
444 PRK14264 phosphate ABC transpo 100.0 3.7E-34 8E-39 323.5 25.5 232 843-1096 45-304 (305)
445 PRK14259 phosphate ABC transpo 100.0 3.3E-34 7E-39 318.7 24.3 202 166-414 27-253 (269)
446 PRK14243 phosphate transporter 100.0 3.4E-34 7.5E-39 317.8 24.4 219 843-1082 10-244 (264)
447 PRK14240 phosphate transporter 100.0 5.5E-34 1.2E-38 314.1 25.7 206 166-413 17-233 (250)
448 PRK14262 phosphate ABC transpo 100.0 5.1E-34 1.1E-38 314.4 25.3 207 165-413 16-233 (250)
449 PRK13547 hmuV hemin importer A 100.0 3.8E-34 8.2E-39 317.7 24.1 213 165-413 14-243 (272)
450 PRK14266 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 314.5 24.9 220 843-1082 3-230 (250)
451 cd03297 ABC_ModC_molybdenum_tr 100.0 3.4E-34 7.3E-39 308.3 22.8 192 170-407 16-214 (214)
452 PRK14252 phosphate ABC transpo 100.0 8.8E-34 1.9E-38 315.0 26.7 217 842-1082 15-245 (265)
453 KOG0066 eIF2-interacting prote 100.0 6.7E-34 1.4E-38 309.2 25.0 210 841-1090 584-795 (807)
454 COG4598 HisP ABC-type histidin 100.0 4.5E-35 9.7E-40 285.9 14.2 207 866-1083 16-238 (256)
455 cd03245 ABCC_bacteriocin_expor 100.0 1.6E-34 3.4E-39 312.2 20.2 209 844-1079 3-220 (220)
456 TIGR02323 CP_lyasePhnK phospho 100.0 5.2E-34 1.1E-38 314.9 24.6 215 844-1082 4-234 (253)
457 PRK03695 vitamin B12-transport 100.0 4.4E-34 9.5E-39 314.0 23.6 198 871-1082 11-218 (248)
458 TIGR01166 cbiO cobalt transpor 100.0 2E-34 4.3E-39 304.1 20.0 179 868-1056 4-188 (190)
459 PRK10790 putative multidrug tr 100.0 1E-34 2.3E-39 358.7 20.5 211 842-1082 339-559 (592)
460 PRK14248 phosphate ABC transpo 100.0 1.5E-33 3.3E-38 313.6 27.8 204 165-413 34-251 (268)
461 PRK10790 putative multidrug tr 100.0 2.7E-34 5.8E-39 355.0 24.1 199 166-414 355-563 (592)
462 PRK11176 lipid transporter ATP 100.0 1.1E-34 2.3E-39 358.2 20.5 214 842-1082 340-563 (582)
463 cd03229 ABC_Class3 This class 100.0 2.6E-34 5.6E-39 299.8 19.9 170 845-1072 2-177 (178)
464 cd03251 ABCC_MsbA MsbA is an e 100.0 1.3E-34 2.8E-39 316.0 18.3 195 870-1081 16-220 (234)
465 PRK14251 phosphate ABC transpo 100.0 9.7E-34 2.1E-38 312.3 25.5 207 165-413 17-234 (251)
466 TIGR00630 uvra excinuclease AB 100.0 8.7E-33 1.9E-37 345.2 37.1 104 971-1081 808-920 (924)
467 COG4987 CydC ABC-type transpor 100.0 4.6E-35 9.9E-40 331.2 15.0 213 843-1083 336-558 (573)
468 PRK09544 znuC high-affinity zi 100.0 5.3E-34 1.2E-38 313.2 23.0 209 843-1092 4-217 (251)
469 PRK13539 cytochrome c biogenes 100.0 3.6E-34 7.8E-39 306.1 21.1 197 844-1070 3-199 (207)
470 PRK13546 teichoic acids export 100.0 1.4E-33 3E-38 311.6 26.3 206 867-1094 35-240 (264)
471 PRK14246 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 311.9 25.7 217 843-1082 10-237 (257)
472 PRK11160 cysteine/glutathione 100.0 1.3E-34 2.7E-39 355.5 19.9 213 842-1082 337-558 (574)
473 COG4618 ArpD ABC-type protease 100.0 2E-34 4.2E-39 322.8 19.5 213 163-416 347-562 (580)
474 COG4181 Predicted ABC-type tra 100.0 3.2E-34 7E-39 278.3 18.4 201 161-405 19-226 (228)
475 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 1.5E-34 3.4E-39 316.1 18.4 197 869-1081 16-221 (238)
476 PRK09580 sufC cysteine desulfu 100.0 1E-33 2.2E-38 311.7 24.8 219 844-1081 2-230 (248)
477 TIGR02982 heterocyst_DevA ABC 100.0 9E-34 2E-38 306.2 23.8 196 165-403 18-219 (220)
478 PRK14260 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 313.0 25.1 206 166-413 21-242 (259)
479 COG4604 CeuD ABC-type enteroch 100.0 3.9E-35 8.4E-40 291.3 11.9 211 163-414 12-225 (252)
480 PRK14244 phosphate ABC transpo 100.0 6.6E-34 1.4E-38 313.6 22.9 212 165-413 18-236 (251)
481 COG4161 ArtP ABC-type arginine 100.0 3.1E-34 6.6E-39 275.2 17.3 216 843-1082 2-226 (242)
482 PRK13545 tagH teichoic acids e 100.0 8.8E-34 1.9E-38 329.8 24.8 226 843-1100 21-246 (549)
483 TIGR01189 ccmA heme ABC export 100.0 5.6E-34 1.2E-38 302.7 21.2 184 868-1068 12-197 (198)
484 PRK14236 phosphate transporter 100.0 2E-33 4.4E-38 313.0 26.7 206 166-413 39-255 (272)
485 PRK14261 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 310.7 25.6 207 165-413 19-236 (253)
486 PRK03695 vitamin B12-transport 100.0 7.4E-34 1.6E-38 312.2 22.6 201 167-413 11-221 (248)
487 PRK14272 phosphate ABC transpo 100.0 1.2E-33 2.5E-38 312.0 24.2 208 165-413 17-235 (252)
488 cd03254 ABCC_Glucan_exporter_l 100.0 2.2E-34 4.7E-39 313.2 18.1 211 843-1081 2-221 (229)
489 COG4152 ABC-type uncharacteriz 100.0 2.8E-34 6E-39 294.4 17.7 209 163-416 13-221 (300)
490 PRK14255 phosphate ABC transpo 100.0 2.6E-33 5.6E-38 309.1 26.9 207 165-413 18-235 (252)
491 TIGR03269 met_CoM_red_A2 methy 100.0 8.4E-34 1.8E-38 344.9 25.2 215 845-1082 2-254 (520)
492 PRK11176 lipid transporter ATP 100.0 3E-34 6.5E-39 354.3 21.5 209 165-414 356-567 (582)
493 PRK14258 phosphate ABC transpo 100.0 2.3E-33 5E-38 310.8 26.2 208 166-413 21-244 (261)
494 TIGR02203 MsbA_lipidA lipid A 100.0 2.3E-33 5.1E-38 345.9 29.1 213 843-1082 330-552 (571)
495 cd03213 ABCG_EPDR ABCG transpo 100.0 1.5E-33 3.2E-38 298.1 23.4 170 165-407 22-194 (194)
496 TIGR02324 CP_lyasePhnL phospho 100.0 1.1E-33 2.5E-38 306.4 23.1 210 844-1070 2-223 (224)
497 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.8E-34 6.1E-39 361.9 21.3 206 165-414 492-700 (710)
498 TIGR00958 3a01208 Conjugate Tr 100.0 3.9E-34 8.4E-39 358.9 22.2 206 165-414 494-702 (711)
499 PRK14275 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 319.8 20.7 204 165-413 52-269 (286)
500 PRK11160 cysteine/glutathione 100.0 5E-34 1.1E-38 350.2 22.5 201 165-414 353-562 (574)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-190 Score=1718.29 Aligned_cols=1005 Identities=55% Similarity=0.926 Sum_probs=934.0
Q ss_pred cchHHHhHHHHHhhCCChhhhhhcccccCCCCcceecccCcChHHHHHHHHHhhhcccccHHHHHHHHHHHHHhcCCCCC
Q 001291 36 EDDEEALKWAAIEKLPTYNRLKKGLLTTSQGEAFEVDVSNLGLQERQRLINKLVTVTEVDNEKFLLKLKNRIERVGIVLP 115 (1106)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 115 (1106)
+||||+|+|||+|||||++| +++.+... .++|+.+++..+++.++++..+..++|+++++.++++|++++ ++|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p 84 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELP 84 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCC
Confidence 34999999999999999999 66543211 179999999999999999999999999999999999999998 899
Q ss_pred cceEEEeeeEEEEEEecccccCCChhhHhHHHHHHHhhhhhcCCCccccceeeeceeEEEeCceEEEEEcCCCCCHHHHH
Q 001291 116 TVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLL 195 (1106)
Q Consensus 116 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 195 (1106)
.++++++++.+++++..| ||+.|...+.++.++...+.. ++....||+|+||.++||+|++++|||||||||||
T Consensus 85 ~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttll 158 (1391)
T KOG0065|consen 85 TIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLL 158 (1391)
T ss_pred ceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHH
Confidence 999999999999998766 999999999998887766544 55667899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCC
Q 001291 196 LALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGI 275 (1106)
Q Consensus 196 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~ 275 (1106)
++|+|.++...+..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +..|+|++.
T Consensus 159 kal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~-- 233 (1391)
T KOG0065|consen 159 KALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA-- 233 (1391)
T ss_pred HHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH--
Confidence 999999988777789999999999999889999999999999999999999999999999999887 666666542
Q ss_pred CCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCC
Q 001291 276 KPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1106)
Q Consensus 276 ~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD 355 (1106)
..+|++++++||++|+||+||++++||+||||||||+||+++++++++++|||+|+|||
T Consensus 234 ---------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLD 292 (1391)
T KOG0065|consen 234 ---------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLD 292 (1391)
T ss_pred ---------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccccccc
Confidence 26899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHh
Q 001291 356 SSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQE 435 (1106)
Q Consensus 356 ~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 435 (1106)
++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||+++
T Consensus 293 SsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~ 372 (1391)
T KOG0065|consen 293 SSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTE 372 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcCCccccccccccccCCcccccHHHHHHHHHHHHHHH
Q 001291 436 VTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLL 515 (1106)
Q Consensus 436 v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~ 515 (1106)
+++++++.++|..+..++.+.++.++.+.|.+++.+.++..+++.|+++++.++.++..++|.++.|+|+++|+.|++++
T Consensus 373 vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l 452 (1391)
T KOG0065|consen 373 VTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLL 452 (1391)
T ss_pred hhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCc
Q 001291 516 MKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFF 595 (1106)
Q Consensus 516 ~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y 595 (1106)
++||.+++++++++.+++++++|++|+++.+ .+..+...+.|++||++++.++++++++++++.++|||+|||+..||
T Consensus 453 ~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY 530 (1391)
T KOG0065|consen 453 MKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFY 530 (1391)
T ss_pred HhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhccccc
Confidence 9999999999999999999999999999985 45667888999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q 001291 596 PPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAV 675 (1106)
Q Consensus 596 ~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~ 675 (1106)
++|||+++++++++|+.++++++|.+|+||++|+.+++++||.+|+++++.+++++++|++++++++++.+|+.++.+.+
T Consensus 531 ~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~ 610 (1391)
T KOG0065|consen 531 PPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILL 610 (1391)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCCccccc------------CC---CccchHHHHhhcc
Q 001291 676 LVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKKFT------------PT---STESLGVQVLESR 740 (1106)
Q Consensus 676 l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~~~~~~------------~~---~~~~~g~~~l~~~ 740 (1106)
+++.+++||+|++.+||+||+|++|++|++|++++++.|||++++|.|.. .. ...+.|..+++.+
T Consensus 611 L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~ 690 (1391)
T KOG0065|consen 611 LVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGR 690 (1391)
T ss_pred HHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEecc
Confidence 99999999999999999999999999999999999999999999999971 11 1356788899988
Q ss_pred ccc-----ccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCcccccCCCCCCCCCcc
Q 001291 741 EFF-----AHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGTVQLSNCGESGNDNRE 815 (1106)
Q Consensus 741 ~~~-----~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1106)
++. +..+|+|+++|+++||.++|++++.+++.|+++..+.+..+..+...+...... ... ...
T Consensus 691 ~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~-------~~~----~~~- 758 (1391)
T KOG0065|consen 691 DYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS-------AGS----SSE- 758 (1391)
T ss_pred cccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh-------ccc----ccc-
Confidence 887 778999999999999999999999999999999888777765544332211100 000 000
Q ss_pred cCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCH
Q 001291 816 RNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGK 895 (1106)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGK 895 (1106)
.. ...+.....++++.+|++|..++++||.|.+++|-+++.+| +++++|+|||+.++||.++||||+|||||
T Consensus 759 ----~~-~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGK 830 (1391)
T KOG0065|consen 759 ----IE-KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGK 830 (1391)
T ss_pred ----cc-ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCch
Confidence 00 00011111356788999999999999999999999998887 67889999999999999999999999999
Q ss_pred HHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHH
Q 001291 896 TTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVM 975 (1106)
Q Consensus 896 STLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l 975 (1106)
|||||+|+||+++|+++|+|.|||+|+.+.+|+|.+|||+|+|.|.+.+||+|.|.|+|++|++.+++.+++.++|++++
T Consensus 831 TTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi 910 (1391)
T KOG0065|consen 831 TTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVI 910 (1391)
T ss_pred HHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999998999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCC-CeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecC
Q 001291 976 ELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1054 (1106)
Q Consensus 976 ~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p-~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~ 1054 (1106)
+.++|++++|.++|.|| .+||++|||||+||++|++|| .||||||||||||++++..|++++|+++++|+|||||+||
T Consensus 911 ~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQ 989 (1391)
T KOG0065|consen 911 ELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQ 989 (1391)
T ss_pred HHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecC
Confidence 99999999999999999 899999999999999999999 8999999999999999999999999999999999999999
Q ss_pred ccHHHHHhcCeEEEEecCCEEEEEecCCCchhHHHHHHHhCCCCcccc
Q 001291 1055 PSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEVCPDAHFHI 1102 (1106)
Q Consensus 1055 ~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~yf~~~~g~~~~~ 1102 (1106)
||.++++.||++++|++||++||+|++|++|+++|+|||+++||+++.
T Consensus 990 PS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~~~~ 1037 (1391)
T KOG0065|consen 990 PSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVKCIS 1037 (1391)
T ss_pred CcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCccCCC
Confidence 999999999999999999999999999999999999999999999854
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.7e-176 Score=1714.04 Aligned_cols=1094 Identities=61% Similarity=1.014 Sum_probs=956.5
Q ss_pred cccchhccccccccccccccCCCCccCCC-------CCCcchHHHhHHHHHhhCCChhhhhhcccccC-----CCC---c
Q 001291 4 SHEIYLASTTSHRSHSRWRTGSVGAFSMS-------SREEDDEEALKWAAIEKLPTYNRLKKGLLTTS-----QGE---A 68 (1106)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~ 68 (1106)
|++..|..|.+.+ .++|.. +++|++. +..|||||+|+|||+||||||+|+|++++.+. .|+ .
T Consensus 5 ~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (1470)
T PLN03140 5 GGSMRRSISRSVS-RSSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLH 81 (1470)
T ss_pred cccHHHHHHHHhh-hhhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccc
Confidence 3445555554443 345633 6888542 13578999999999999999999999999652 122 2
Q ss_pred ceecccCcChHHHHHHHHHhhhcccccHHHHHHHHHHHHHhcCCCCCcceEEEeeeEEEEEEecccccCCChhhHhHHHH
Q 001291 69 FEVDVSNLGLQERQRLINKLVTVTEVDNEKFLLKLKNRIERVGIVLPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIF 148 (1106)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 148 (1106)
.|+|+++|+.++++.+++++++++++|+++|+.++++|.+++|+++|+++|+|+||+|++++.++++.+||++|...+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~ 161 (1470)
T PLN03140 82 KEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIA 161 (1470)
T ss_pred cccccccCChHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHhhhhhcCCCccccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceE
Q 001291 149 EDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTA 228 (1106)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~ 228 (1106)
+.+.+..+...+++.+++||+|+||.++|||+++|+||||||||||||+|+|+++|+.+++|+|+|||+++++..+++.+
T Consensus 162 ~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i 241 (1470)
T PLN03140 162 ESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTS 241 (1470)
T ss_pred HHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhccccee
Confidence 87776555444555678899999999999999999999999999999999999998778899999999998776667889
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCC
Q 001291 229 AYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL 308 (1106)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1106)
+||+|+|.|++++||+|||.|+++|++.+.++++..++++++++.++.|+.+++.+|++...++.+.+..++.+++.+||
T Consensus 242 ~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL 321 (1470)
T PLN03140 242 AYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGL 321 (1470)
T ss_pred EEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCC
Confidence 99999999999999999999999999877777666677788888888899999999998888877778889999999999
Q ss_pred cccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHH
Q 001291 309 DICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPET 388 (1106)
Q Consensus 309 ~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~ 388 (1106)
++|+||.||+++.+||||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.+++
T Consensus 322 ~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i 401 (1470)
T PLN03140 322 DICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPET 401 (1470)
T ss_pred ccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998766889999999999999
Q ss_pred HhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhc
Q 001291 389 YNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSF 468 (1106)
Q Consensus 389 ~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1106)
+++||+|++|++|+++|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|+++
T Consensus 402 ~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s 481 (1470)
T PLN03140 402 FDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSF 481 (1470)
T ss_pred HHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999988888887666777778999999999999
Q ss_pred hhhhhhhhhhcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCC
Q 001291 469 HVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHK 548 (1106)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~ 548 (1106)
+.++.+.++++.|.+++..++.....+.|..++++|++.|++|++++++||+..+++|+++.+++|+++|++||+++.+.
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~ 561 (1470)
T PLN03140 482 HVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHT 561 (1470)
T ss_pred HHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99988888877776665556666666789999999999999999999999999999999999999999999999998766
Q ss_pred CcccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhcc
Q 001291 549 DSVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIG 628 (1106)
Q Consensus 549 ~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g 628 (1106)
.+..++..+.|++||++++.+++++++++.++.++|+|+|||+.+||++|+|++|+++.++|+.++++++|++|+|||+|
T Consensus 562 ~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~G 641 (1470)
T PLN03140 562 RNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIG 641 (1470)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Confidence 55567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHH
Q 001291 629 YDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQ 708 (1106)
Q Consensus 629 ~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~ 708 (1106)
|.+++++||.|++++++.++++.++|++++++++++.+|+.+++++++++++|+||++++++||+||+|++|+||++|++
T Consensus 642 l~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~ 721 (1470)
T PLN03140 642 FAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGF 721 (1470)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCccccc-CCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccc
Q 001291 709 NGILANEFLGHSWKKFT-PTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEE 787 (1106)
Q Consensus 709 ~al~~nef~~~~~~~~~-~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~ 787 (1106)
+++++|||.+..|.+.. .......|.++|+.+++.....|+|++++++++|+++|+++++++|+|.++.......+..+
T Consensus 722 eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~ 801 (1470)
T PLN03140 722 NALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEE 801 (1470)
T ss_pred HHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCcccccc
Confidence 99999999998886432 23345789999999999988899999999999999999999999999998766655544322
Q ss_pred cccccccccccC--cccccCCCC---CC---CCCccc-C-CCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccc
Q 001291 788 FESDEQDNRIGG--TVQLSNCGE---SG---NDNRER-N-SSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQ 857 (1106)
Q Consensus 788 ~~~~~~~~~~~~--~~~~~~~~~---~~---~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~ 857 (1106)
............ ......... .. ...... . ..............++++.+|+.|.+++|+||+|+|++|.
T Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~ 881 (1470)
T PLN03140 802 TAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPA 881 (1470)
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCc
Confidence 111000000000 000000000 00 000000 0 0000000000112345677899999999999999999998
Q ss_pred hhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccC
Q 001291 858 QMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQN 937 (1106)
Q Consensus 858 ~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~ 937 (1106)
+++..+..++++.+|+|||++++||+++||+|||||||||||++|+|+.++|+.+|+|.++|.+..+..+++.+|||+|+
T Consensus 882 ~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~ 961 (1470)
T PLN03140 882 EMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQN 961 (1470)
T ss_pred cccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccc
Confidence 87766666677789999999999999999999999999999999999987777899999999887655566789999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeE
Q 001291 938 DIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSII 1017 (1106)
Q Consensus 938 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~il 1017 (1106)
+.+++.+||+|++.|++.++.+.....+++++.++++++.++|.++.+..+|.+++++|||||||||+||+||+.+|+||
T Consensus 962 d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL 1041 (1470)
T PLN03140 962 DIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSII 1041 (1470)
T ss_pred cccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999998887665555566667899999999999999999988887889999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCchhHHHHHHHhCCC
Q 001291 1018 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEVCPD 1097 (1106)
Q Consensus 1018 lLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~yf~~~~g 1097 (1106)
||||||+|||+.++..+++.|++++++|+||||++|||+.++++.||++++|++||+++|.|+.+++++++++||++++|
T Consensus 1042 ~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g 1121 (1470)
T PLN03140 1042 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPG 1121 (1470)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCC
Confidence 99999999999999999999999998899999999999977889999999999889999999999999999999999999
Q ss_pred Ccc
Q 001291 1098 AHF 1100 (1106)
Q Consensus 1098 ~~~ 1100 (1106)
+|+
T Consensus 1122 ~~~ 1124 (1470)
T PLN03140 1122 VPK 1124 (1470)
T ss_pred CCC
Confidence 864
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=9.4e-136 Score=1338.42 Aligned_cols=952 Identities=33% Similarity=0.547 Sum_probs=770.5
Q ss_pred ccHHHHHHHHHHHHHhcCCCCC--cceEEEeeeEEEEEEecccccCCChhhHhHHHHHHHhhhhhcCCCccccceeeece
Q 001291 94 VDNEKFLLKLKNRIERVGIVLP--TVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDV 171 (1106)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 171 (1106)
.|++++++.++++.++.+...| +++|+|+||+|++ ...+....||+.|.+.+....+..... ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 5677777766666666666666 9999999999999 344566789999998876664433221 12334567899999
Q ss_pred eEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCC-CceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCCHHHHHH
Q 001291 172 SGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL-KVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMTVRETLA 248 (1106)
Q Consensus 172 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1106)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||.++.+.. .++.++||+|+|.|++++||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974211 24999999998875432 2456999999999999999999999
Q ss_pred HHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhh
Q 001291 249 FAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQ 328 (1106)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGq 328 (1106)
|+++++....+.. ...+.+ ..+..++.+++.+||++++||.||+++.+||||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9988764211100 000000 11233567899999999999999999999999999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEcC
Q 001291 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 408 (1106)
Q Consensus 329 kqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 408 (1106)
||||+||++|+.+|+|+||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999876678999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcCCcccc---
Q 001291 409 RELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFDKS--- 485 (1106)
Q Consensus 409 ~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 485 (1106)
++++.+||+++||.||++.++|||+.+++++.++ +++... +.....+.+++.++|+.++.++++.++++.+.+..
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~-e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGY-EKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccc-cccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999887543 222111 11123568899999999887776665544322110
Q ss_pred ------------ccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccc
Q 001291 486 ------------KSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTD 553 (1106)
Q Consensus 486 ------------~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~ 553 (1106)
...+.....+.|..++|.|+++|++|+++.++||+..++.++++.+++|+++|++||+++.+ ..+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~---~~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN---TSD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---chh
Confidence 00011223456889999999999999999999999999999999999999999999987643 235
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCch
Q 001291 554 GGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNA 633 (1106)
Q Consensus 554 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 633 (1106)
.+.+.|++||++++.++.++.++..++.+|++|+|||..++|++++|++|+.+.++|+.++.+++|++|+|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 67789999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHH
Q 001291 634 GRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILA 713 (1106)
Q Consensus 634 ~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~ 713 (1106)
++||.+++++++...++.++++++++++++..+|+.+++++++++++|+||+++.++||+||+|++|+||+.|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCccccc--C----------------------CCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 001291 714 NEFLGHSWKKFT--P----------------------TSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFAL 769 (1106)
Q Consensus 714 nef~~~~~~~~~--~----------------------~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l 769 (1106)
|||.+..+.|.. | +.....|.++|+. .+.....|+|.+++++++|+++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887741 1 0123478888885 33445678999999999999999999999
Q ss_pred HHHhccccCCCccccccccccccccccccCcccccCCCCCCCCCcccCCCCc--ccccccCCCccCCCcCC--CCCceee
Q 001291 770 ALTFLNQFEKPRAVITEEFESDEQDNRIGGTVQLSNCGESGNDNRERNSSSS--LTEAEASHPKKRGMVLP--FEPYSLT 845 (1106)
Q Consensus 770 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~--~~~~~l~ 845 (1106)
++.|.++.......+.......... .+.....+......++..... ....+..... .....| .....+.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ 761 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRA------KKAGETSASNKNDIEAGEVLGSTDLTDESDDVN-DEKDMEKESGEDIFH 761 (1394)
T ss_pred HHHhccccCCCCceEeeccccccch------hhcccccccccccccccccCCCCcccccccccc-ccccccccCCCceEE
Confidence 9999886544332222111000000 000000000000111110000 0000000000 000001 1123578
Q ss_pred ecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc-eeEEEEEEcCccCCh
Q 001291 846 FDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYPKKQ 924 (1106)
Q Consensus 846 f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~~~ 924 (1106)
|+|++|.++.+ .+++.+|+|||+++++||++||+||||||||||+++|+|+.+++ +.+|+|.+||.+...
T Consensus 762 ~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~ 832 (1394)
T TIGR00956 762 WRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS 832 (1394)
T ss_pred EEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh
Confidence 99999987532 13457999999999999999999999999999999999987643 457999999998753
Q ss_pred hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 001291 925 ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRL 1004 (1106)
Q Consensus 925 ~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl 1004 (1106)
.+++.+|||+|++.+.+.+||+|++.|++.++.+.....+++++.++++++.++|.++.|+.++.++. +|||||||||
T Consensus 833 -~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl 910 (1394)
T TIGR00956 833 -SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRL 910 (1394)
T ss_pred -hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHH
Confidence 46778999999999999999999999998888665555666677899999999999999999886654 7999999999
Q ss_pred HHHHHHhcCCC-eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1005 TIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1005 ~iA~aL~~~p~-illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
+||+||+.+|+ ||||||||||||+.++..|+++|++++++|+|||+|+|||+..+++.||++++|++||+++|.|+.++
T Consensus 911 ~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 911 TIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99999999997 99999999999999999999999999888999999999999656788999999999889999999999
Q ss_pred chhHHHHHHHhCCCC
Q 001291 1084 HSCHLISYFEVCPDA 1098 (1106)
Q Consensus 1084 ~~~~~~~yf~~~~g~ 1098 (1106)
+++++++||++ .|+
T Consensus 991 ~~~~~~~yf~~-~G~ 1004 (1394)
T TIGR00956 991 NSHTIINYFEK-HGA 1004 (1394)
T ss_pred ccchHHHHHHh-cCC
Confidence 99999999996 565
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.6e-84 Score=783.89 Aligned_cols=585 Identities=30% Similarity=0.492 Sum_probs=491.8
Q ss_pred CCcceEEEeeeEEEEEEecccccCCChhhHhHHHHHHHhhhhhcCCCccccceeeeceeEEEeCceEEEEEcCCCCCHHH
Q 001291 114 LPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTT 193 (1106)
Q Consensus 114 ~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1106)
...++++|+|+++++... .+ ..+++|+||||+++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 346789999999997642 11 4578999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhc
Q 001291 194 LLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAA 273 (1106)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~ 273 (1106)
||++|+|+..+...++|+|++||++......++.+|||.|+|.++|++||+|+|.|++.++-.. +++
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~-------~~~------ 138 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPS-------SLS------ 138 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCC-------CCC------
Confidence 9999999998766789999999988776667889999999999999999999999999987431 111
Q ss_pred CCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 001291 274 GIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1106)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsg 353 (1106)
.++.+.+++.+++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 139 ------------------~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 139 ------------------KEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 23345689999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHH
Q 001291 354 LDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1106)
Q Consensus 354 LD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1106)
||+.++.++++.|+++|+. |+|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcCCccccccccccccCCcccccHHHHHHHHHHHHH
Q 001291 434 QEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSREL 513 (1106)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~ 513 (1106)
.++.+..++.+..... .........++......+.......... + ..........++|.|+..+++|.+
T Consensus 280 l~l~s~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~s~~~q~~~L~~R~~ 348 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA------VRIAKLINKFSQTDNLKKTLEALEKSLS----T-SKKVEIGTSPSWWTQFKILLKRSL 348 (613)
T ss_pred HHHHccCCCchhHHhH------HHHHHHhhhccccchhhhhHHHHhhhcc----c-ccccccccCCcHHHHHHHHHHHHh
Confidence 9987743110000000 0000001111100000000000000000 0 000001116789999999999999
Q ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHHHHHHHHHHHHhHHH-HHHHHhhhchhhHHhhhc
Q 001291 514 LLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFA-EISMTIVKLPVFYKQRDF 592 (1106)
Q Consensus 514 l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~kqr~~ 592 (1106)
...+|++..+..|++|.+.+++++|++||+.+.... ......|++||.+.+..+.... .++.+..++++|.||+..
T Consensus 349 ~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~~ 425 (613)
T KOG0061|consen 349 KNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETSS 425 (613)
T ss_pred HHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHhc
Confidence 999999999999999999999999999998754332 3346788888888888776655 588899999999999999
Q ss_pred CCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Q 001291 593 KFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGS 672 (1106)
Q Consensus 593 ~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~ 672 (1106)
++|+.++|++++.+.++|+.++.+++|++++|||+|+.++..+|+.++++.++..+++.+++.+++++.++...|.++++
T Consensus 426 ~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~~ 505 (613)
T KOG0061|consen 426 GLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLGP 505 (613)
T ss_pred CchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCCcccccC--CCccchHHHHhhcccccccchhhH
Q 001291 673 FAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKKFTP--TSTESLGVQVLESREFFAHAYWYW 750 (1106)
Q Consensus 673 ~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~l~~~~~~~~~~~~w 750 (1106)
.+++.+++|+||+++.+.||.||.|+.|+|+++|++++++.|+|.+....|... ..+...+.++++..++... ..|
T Consensus 506 ~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~ 583 (613)
T KOG0061|consen 506 VLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--SFW 583 (613)
T ss_pred HHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--ccc
Confidence 999999999999999999999999999999999999999999999743444332 3456678888888887544 467
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Q 001291 751 LGLGALFGFILLLNVGFALALTFLN 775 (1106)
Q Consensus 751 ~~~~~l~~~~~~f~i~~~l~L~~~~ 775 (1106)
.++.++++++++|.++++++|++..
T Consensus 584 ~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 584 LDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 8999999999999999999998764
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.8e-82 Score=781.08 Aligned_cols=570 Identities=25% Similarity=0.401 Sum_probs=481.1
Q ss_pred cccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCC
Q 001291 162 KKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1106)
+.++++|+|+|++++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44678999999999999999999999999999999999998876556899999999876444467899999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc-
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM- 320 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1106)
||+|||.|+++++.... .. .++....++.+++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~-------~~------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRR-------VT------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCC-------CC------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 99999999987753210 00 11223468889999999999999999864
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
.+||||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 689999999999999999999999999999999999999999999999875 5889999999999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcC
Q 001291 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1106)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1106)
|+++|+|+++++.+||+++||+||++.+++||+.++.+...... .......+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSE-------NESRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCcccc-------cchHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 99999999999999999999999999999999999876432210 00112234555666655544443332221
Q ss_pred Cccccc---cccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhH
Q 001291 481 PFDKSK---SHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIY 557 (1106)
Q Consensus 481 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~ 557 (1106)
....+. ..........|..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+ ..+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHHH
Confidence 111000 0000112245778999999999999999999999999999999999999999999976543 2345566
Q ss_pred HHHHHHHHHHHHHhHH-HHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHH
Q 001291 558 AGALFFTIVMPLFSGF-AEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRF 636 (1106)
Q Consensus 558 ~g~lff~l~~~~~~~~-~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf 636 (1106)
.|++|+.++...+.++ ..+..+..++++|+|||..++|++++|++++.+.++|+.++.+++|++++|||+|+.+++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 8899999888887765 445667789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhh
Q 001291 637 FKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEF 716 (1106)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef 716 (1106)
|.++++.+++..++.++++++++++++..+|..+++++++++++|+||+++.++||.||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCc-ccccCCC---ccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 001291 717 LGHSW-KKFTPTS---TESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLN 775 (1106)
Q Consensus 717 ~~~~~-~~~~~~~---~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~ 775 (1106)
.+..+ .|...+. +...|.++++.+++... ++|.+++++++++++|.++++++|++..
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~~ 613 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIRI 613 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98765 3432111 23458899998887653 4588999999999999999999998753
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=6.2e-82 Score=774.82 Aligned_cols=609 Identities=21% Similarity=0.350 Sum_probs=470.5
Q ss_pred CCcceEEEeeeEEEEEEecccccCCChhhHhHHHHHHHhhhhhcCCCccccceeeeceeEEEeCceEEEEEcCCCCCHHH
Q 001291 114 LPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTT 193 (1106)
Q Consensus 114 ~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1106)
.++++++|.|++|.+.......+... .......-....++..+. ..+++|+|+|++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~-~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDETRQI-QERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----cccccccccccccccccC-CCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45799999999999864310111100 000000000000111111 2467999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhc
Q 001291 194 LLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAA 273 (1106)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~ 273 (1106)
||++|+|+++|+ ..+|+|.+||+++... .++.++||+|+|.+++.+||+||+.|++.++.... ..
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~------ 174 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LT------ 174 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CC------
Confidence 999999998874 3589999999987532 23569999999999999999999999876542100 00
Q ss_pred CCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 001291 274 GIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1106)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsg 353 (1106)
.++....++++++.+||++++||.||+...++|||||||||+||++|+.+|+||||||||+|
T Consensus 175 ------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 175 ------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 01123457889999999999999999988999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHH
Q 001291 354 LDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1106)
Q Consensus 354 LD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1106)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+++++.+||+++||.||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999876 5788999888888889999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcC---Cccccc-----cccc-cccCCcccccHHHH
Q 001291 434 QEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT---PFDKSK-----SHRA-ALTTKVYGVGKREL 504 (1106)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~-~~~~~~~~~~~~~~ 504 (1106)
.++.+...+.+.....+.+ ...+.+.+.|+... .....+.... +..... ..+. ......+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998754321100000001 11223333443211 1111000000 000000 0000 00112345689999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHHHHHHHHHHHH-hHHHHHHHHhhhc
Q 001291 505 LKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLF-SGFAEISMTIVKL 583 (1106)
Q Consensus 505 ~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~lff~l~~~~~-~~~~~~~~~~~~~ 583 (1106)
+..+++|.++. +|+..+...|+++.+++|+++|++||+.+ ..+.+...|++||++++.++ ..+..++.+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999763 23467788999999877665 5567788888999
Q ss_pred hhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 001291 584 PVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRN 663 (1106)
Q Consensus 584 ~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~ 663 (1106)
++|+|||.+++|++++|++|+.+.++|+.++.+++|++++|||+|+.+++++||.++++++++..++++++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCCc-----ccccCCCccchHHHHhh
Q 001291 664 LVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSW-----KKFTPTSTESLGVQVLE 738 (1106)
Q Consensus 664 ~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~~-----~~~~~~~~~~~g~~~l~ 738 (1106)
+.+|+.+++++++++++|+||+++ +||.||+|++|+||++|++++++.|||.+.+. .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999996 79999999999999999999999999976532 33221100000011222
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 001291 739 SREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLN 775 (1106)
Q Consensus 739 ~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~ 775 (1106)
...+. ....|.+++++++++++|+++++++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 11221 234788999999999999999999997654
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.8e-80 Score=811.52 Aligned_cols=595 Identities=22% Similarity=0.376 Sum_probs=497.8
Q ss_pred CCCCCcceEEEeeeEEEEEEecccccCCChhhHhHHHHHHHhhhhhcCCCccccceeeeceeEEEeCceEEEEEcCCCCC
Q 001291 111 GIVLPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSG 190 (1106)
Q Consensus 111 ~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsG 190 (1106)
.++..++.+.|+||+|+++.....+. ......++.+|+|||+.++||++++|+||||||
T Consensus 860 ~~~~~~~~~~~~~v~y~v~~~~~~~~---------------------~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaG 918 (1470)
T PLN03140 860 VLPFTPLAMSFDDVNYFVDMPAEMKE---------------------QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAG 918 (1470)
T ss_pred ccCCCcceEEEEEEEEEEccCccccc---------------------cccCcCCceEeeCcEEEEECCeEEEEECCCCCC
Confidence 34566678999999999875321000 011123457999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHH
Q 001291 191 KTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRRE 270 (1106)
Q Consensus 191 KSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e 270 (1106)
|||||++|+|+.++ ...+|+|.+||++......++.+|||+|+|.|++.+||+|||.|++.++.... ..
T Consensus 919 KTTLL~~LaG~~~~-g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~-------~~--- 987 (1470)
T PLN03140 919 KTTLMDVLAGRKTG-GYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKE-------VS--- 987 (1470)
T ss_pred HHHHHHHHcCCCCC-CcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCC-------CC---
Confidence 99999999999764 24589999999887543345679999999999999999999999876542100 00
Q ss_pred HhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecC
Q 001291 271 KAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEI 350 (1106)
Q Consensus 271 k~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEp 350 (1106)
.++....++++++.+||++++|+.||+...+||||||||||+||++|+.+|++||||||
T Consensus 988 ---------------------~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEP 1046 (1470)
T PLN03140 988 ---------------------KEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEP 1046 (1470)
T ss_pred ---------------------HHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCC
Confidence 01123457889999999999999999877789999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC-CeEEEEcCH----HHHHHHHHhc-CC-CC
Q 001291 351 STGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD-GQIVYQGPR----ELVLEFFESM-GF-KC 423 (1106)
Q Consensus 351 tsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~~ 423 (1106)
|+|||+.++..+++.|++++. .++|+|+++|||..+++++||++++|++ |+++|+||. +++.+||+++ |+ +|
T Consensus 1047 TsgLD~~~a~~v~~~L~~l~~-~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~ 1125 (1470)
T PLN03140 1047 TSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKI 1125 (1470)
T ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCC
Confidence 999999999999999999875 4789999999998889999999999996 899999996 6899999998 66 49
Q ss_pred CCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhh---cCCccccccccccccCCccccc
Q 001291 424 PKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDEL---QTPFDKSKSHRAALTTKVYGVG 500 (1106)
Q Consensus 424 p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 500 (1106)
|+..|||||+.++++..... ....++++.|+.++..+...+.+ ..+... .+.......|..+
T Consensus 1126 p~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~s 1190 (1470)
T PLN03140 1126 KEKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPG---ASDLYFATQYSQS 1190 (1470)
T ss_pred CCCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCC---ccccccCccccCC
Confidence 99999999999987643211 11235778888777665554333 222111 1111123568899
Q ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHHHHHHHHHHHHhHHH-HHHHH
Q 001291 501 KRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFA-EISMT 579 (1106)
Q Consensus 501 ~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~ 579 (1106)
+|.|++.|++|+++.++|++.++..|+++.+++|+++|++||+.+.+..+..+.+...|++|+++++..+.... .++.+
T Consensus 1191 ~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~ 1270 (1470)
T PLN03140 1191 TWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMV 1270 (1470)
T ss_pred HHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988765555566667789999988887776554 45677
Q ss_pred hhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001291 580 IVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGA 659 (1106)
Q Consensus 580 ~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~ 659 (1106)
..+|++|+|||..++|++++|++|+.+.++|+.++.+++|++++|||+||.++++.||.++++.++...++.++++++++
T Consensus 1271 ~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a 1350 (1470)
T PLN03140 1271 AVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVS 1350 (1470)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCCcccccCCC-ccchHHHH-h
Q 001291 660 IGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKKFTPTS-TESLGVQV-L 737 (1106)
Q Consensus 660 i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~~~~~~~~~-~~~~g~~~-l 737 (1106)
++++..+|..+++++..++++|+||++++++||.||+|+||+||+.|++++++.|||.+....|.+++. ....+.++ +
T Consensus 1351 ~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 1430 (1470)
T PLN03140 1351 LTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQ 1430 (1470)
T ss_pred HCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988776655542 12234444 6
Q ss_pred hcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 001291 738 ESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQ 776 (1106)
Q Consensus 738 ~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~ 776 (1106)
+.+|+. ..|.|.+++++++|+++|.+++++++++++.
T Consensus 1431 ~~~g~~--~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1431 DHYGYD--PDFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred HhcCcC--cccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 667775 4578889999999999999999999999875
No 8
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-79 Score=750.35 Aligned_cols=792 Identities=21% Similarity=0.267 Sum_probs=433.9
Q ss_pred CCCccccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCC
Q 001291 158 LPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
+|+| ++..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.++|.++.++.. +.++|.|+|+
T Consensus 360 YPsR-pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Qe 435 (1228)
T KOG0055|consen 360 YPSR-PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQE 435 (1228)
T ss_pred CCCC-CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeec
Confidence 3454 3678999999999999999999999999999999999999998 9999999999987654 4789999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccc
Q 001291 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
|.+| ..||+|||.|+.. |.+.+...+++ +.++..--+..|++..||
T Consensus 436 PvlF-~~tI~eNI~~G~~-------------------------dat~~~i~~a~--------k~ana~~fi~~lp~g~~T 481 (1228)
T KOG0055|consen 436 PVLF-ATTIRENIRYGKP-------------------------DATREEIEEAA--------KAANAHDFILKLPDGYDT 481 (1228)
T ss_pred hhhh-cccHHHHHhcCCC-------------------------cccHHHHHHHH--------HHccHHHHHHhhHHhhcc
Confidence 9665 5799999999742 11111111111 112222334568888999
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.||+.. -.|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|.+.. .|+|+|+ +.|..+.+-+ +|+
T Consensus 482 ~vge~g-~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~ 556 (1228)
T KOG0055|consen 482 LVGERG-VQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADK 556 (1228)
T ss_pred cccCCC-CCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCE
Confidence 999833 3399999999999999999999999999999999999999999998753 4667766 4566665555 999
Q ss_pred EEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCCh-hHHH--HhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhh
Q 001291 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGV-ADFL--QEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVG 471 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~-ad~l--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1106)
|++|++|+||+.|.++|+... . +. ++.+ |+....++. ..+..+ . .++.....+.+...
T Consensus 557 I~v~~~G~IvE~G~h~ELi~~----------~-G~Y~~lv~~Q~~~~~~~~-~~~~~~-~------~~~~~~s~~~s~~~ 617 (1228)
T KOG0055|consen 557 IAVMEEGKIVEQGTHDELIAL----------G-GIYSSLVRLQELEKAAED-EEEEES-L------KEERSRSLKSSSSS 617 (1228)
T ss_pred EEEEECCEEEEecCHHHHHhc----------c-chHHHHHHHHhhhhhhhc-cccccc-h------hhhhhhcccccccc
Confidence 999999999999999999862 1 11 2221 111111110 000000 0 00000000000000
Q ss_pred hhhhh------hh-cCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHH-------HHHHHHH
Q 001291 472 QKLSD------EL-QTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQI-------GSITLVY 537 (1106)
Q Consensus 472 ~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~-------~~~~li~ 537 (1106)
..... .. ..+.+.....+. .......+++..++ ..+.++.+.+.-.+.. .+.++++
T Consensus 618 ~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~s~~~i~k--------~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~ 687 (1228)
T KOG0055|consen 618 PSLSRGSNRSNLLSVKPEGEDPEEPV--SEEDEKVSFWRIFK--------LNKPEWPYLLLGSLGAAIRGATYPLFAYVF 687 (1228)
T ss_pred ccccCCcccccccccccccccccccc--ccccccccHHHHHH--------hccchhHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 00000 00 000000000000 00112233333333 2223322222222221 2222333
Q ss_pred HHH---HccccCCCCcccchhhHHHHHHHHHHHHHHh--HHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHH
Q 001291 538 MTL---FFRTKMHKDSVTDGGIYAGALFFTIVMPLFS--GFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPIS 612 (1106)
Q Consensus 538 g~~---f~~~~~~~~~~~~~~~~~g~lff~l~~~~~~--~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~ 612 (1106)
+.+ |+..+ .+..........++|.++....+- .+......+. --.+..++-.
T Consensus 688 s~~~~~f~~~~--~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~--------------------ge~Lt~R~R~- 744 (1228)
T KOG0055|consen 688 SQVLEAFYPPD--DDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIA--------------------GEKLTKRLRS- 744 (1228)
T ss_pred HHHHHHHhCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHH-
Confidence 322 22111 111111111122222222111110 0000000000 0011111111
Q ss_pred HHHHhhHHhhhhhhcccc---CchhHHHHHHH-----HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhc
Q 001291 613 FLEPAVWVFLSYYVIGYD---PNAGRFFKQYL-----LLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGF 684 (1106)
Q Consensus 613 ~~~~~i~~~i~Y~~~g~~---~~~~rf~~~~l-----~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf 684 (1106)
..|..+++.=+++- .+.++...++. +--++..-+..++..++++...+.+|..++|-+.++++.+..+
T Consensus 745 ----~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pl 820 (1228)
T KOG0055|consen 745 ----MMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPL 820 (1228)
T ss_pred ----HHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222333323321 11244444432 2223444455566667777777788888888777666654433
Q ss_pred ccCccchhhHHHHHHhhcH---HHHHHHHHHHHhhcCCCcccccCCCccchHHHHhhccccc-------ccchhhHHHHH
Q 001291 685 VLSREEVKKWWKWAYWSSP---VMYAQNGILANEFLGHSWKKFTPTSTESLGVQVLESREFF-------AHAYWYWLGLG 754 (1106)
Q Consensus 685 ~i~~~~ip~~~~w~~~isP---~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~-------~~~~~~w~~~~ 754 (1106)
++-...+.. .++.-.+. -.|.-.+.+.+|-..+-.... .......+++.+.-. ......|.+++
T Consensus 821 l~~~~~~~~--~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~----al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~ 894 (1228)
T KOG0055|consen 821 LILSGYLQK--KFLKGFSKDDKKAYEEASKIAIEAVSNIRTVA----ALCAEEKFMELYKEELEKPRKSSFKRGLISGLG 894 (1228)
T ss_pred HHHHHHHHH--HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 321110000 00000000 001111122222211100000 000011111111000 00111233322
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCCCccccccccccc----c-ccccccCcccccCCCCCCCCCcccCCCCcccccccCC
Q 001291 755 ALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESD----E-QDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASH 829 (1106)
Q Consensus 755 ~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 829 (1106)
.-+...++| +.++++++|...+-.......+..... . .....+....+.|+...+..+.......-...+..+.
T Consensus 895 f~~sqs~~~-~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~ 973 (1228)
T KOG0055|consen 895 FGFSQSLLF-FVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPTIDP 973 (1228)
T ss_pred HHHHHHHHH-HHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 222221111 122223333221111111100000000 0 0000001111111111110000000000000000000
Q ss_pred CccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc
Q 001291 830 PKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG 909 (1106)
Q Consensus 830 ~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~ 909 (1106)
....+...|-....+.|+||.|+||..+ +.++|+|+|++|++|+.+||||||||||||++.+|-+...
T Consensus 974 ~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd-- 1041 (1228)
T KOG0055|consen 974 DSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD-- 1041 (1228)
T ss_pred CCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--
Confidence 0112222333445799999999998753 5679999999999999999999999999999999987655
Q ss_pred eeEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-----
Q 001291 910 YITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----- 981 (1106)
Q Consensus 910 ~~~G~i~i~g~~~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~----- 981 (1106)
+..|.|.|||.+++. ...|+++|.|.|+|.++. .|++||+.|+. . +.+ .+.+.++++..+..
T Consensus 1042 p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~--~---~vs----~~eIi~Aak~ANaH~FI~s 1111 (1228)
T KOG0055|consen 1042 PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS--E---EVS----EEEIIEAAKLANAHNFISS 1111 (1228)
T ss_pred CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC--C---CCC----HHHHHHHHHHhhhHHHHhc
Confidence 468999999999865 356788999999999875 79999999982 1 122 22344555554433
Q ss_pred --cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHH
Q 001291 982 --PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDI 1059 (1106)
Q Consensus 982 --~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~ 1059 (1106)
+=.|..+|..|. +||||||||++|||||++||+||||||+||+||.++.+.|+++|++.. .|||.|+|+|++| .
T Consensus 1112 LP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRLS--T 1187 (1228)
T KOG0055|consen 1112 LPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRLS--T 1187 (1228)
T ss_pred CcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecchh--h
Confidence 334566666665 599999999999999999999999999999999999999999999874 6999999999997 4
Q ss_pred HHhcCeEEEEecCCEEEEEecCC
Q 001291 1060 FEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1060 ~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
.+.||.|.++++ |++++.|+-.
T Consensus 1188 IqnaD~I~Vi~~-G~VvE~GtH~ 1209 (1228)
T KOG0055|consen 1188 IQNADVIAVLKN-GKVVEQGTHD 1209 (1228)
T ss_pred hhcCCEEEEEEC-CEEEecccHH
Confidence 689999999985 7999999743
No 9
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-77 Score=750.34 Aligned_cols=780 Identities=21% Similarity=0.247 Sum_probs=452.2
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCH
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1106)
..+.|+|||+.|++|+++||+||.|||||+||.+|.|+++.. +|+|.++| .+|||+|.++ +.+.||
T Consensus 533 ~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pW-I~ngTv 598 (1381)
T KOG0054|consen 533 PEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPW-IQNGTV 598 (1381)
T ss_pred CcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccH-hhCCcH
Confidence 344899999999999999999999999999999999999876 99999999 5999999975 567899
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
||||.|+..+. ..||+.+.+.|.+++|.+++|++| .|.||+ .+-.
T Consensus 599 reNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGE-rGin 643 (1381)
T KOG0054|consen 599 RENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGE-RGIN 643 (1381)
T ss_pred HHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecC-CccC
Confidence 99999998775 379999999999999999999998 499997 3445
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHH-HHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIV-NCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~-~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||++|||++++++|++||+|.|++|+++..+|+ ++++.+ ..++|+|+ ++| .-+..+.+|.|++|++|+
T Consensus 644 LSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~--L~~KT~IL-VTH-ql~~L~~ad~Iivl~~G~ 719 (1381)
T KOG0054|consen 644 LSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGL--LRGKTVIL-VTH-QLQFLPHADQIIVLKDGK 719 (1381)
T ss_pred CcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhh--hcCCEEEE-EeC-chhhhhhCCEEEEecCCe
Confidence 9999999999999999999999999999999999999999 467543 23455555 455 567889999999999999
Q ss_pred EEEEcCHHHHHH---HHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhc
Q 001291 403 IVYQGPRELVLE---FFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQ 479 (1106)
Q Consensus 403 iv~~G~~~~~~~---~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1106)
|+..|+++|+.+ .|+.+ ...+. ...+.. .....+.......+. +. +.........+...
T Consensus 720 I~~~Gty~el~~~~~~~~~l-~~~~~------------~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~ 781 (1381)
T KOG0054|consen 720 IVESGTYEELLKSGGDFAEL-AHEEE------------SEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEKSK 781 (1381)
T ss_pred EecccCHHHHHhcchhHHHH-hhccc------------hhhccc---cccccccccccccch-hh-hhhhhhcccccccc
Confidence 999999999983 33332 00000 000000 000000000000000 00 00000000000000
Q ss_pred CCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHH-HHHHHH----HHHHHHHHHHccccCCCCcc---
Q 001291 480 TPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIF-KLIQIG----SITLVYMTLFFRTKMHKDSV--- 551 (1106)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~-~~~~~~----~~~li~g~~f~~~~~~~~~~--- 551 (1106)
.................+.-.|...+..+ ..........+ -+.+.. .++.-++.-|| ++......
T Consensus 782 -~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~-----~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W-~~~~~~~~~~~ 854 (1381)
T KOG0054|consen 782 -DEKEEEDKLVQEEERETGKVSWSVYKKYI-----KAAGGFLLVLLILLLFVLTQVLQIASNYWLSYW-TDDGEDNGTTT 854 (1381)
T ss_pred -cccchhhHHHHHHHHhcCEeeHHHHHHHH-----HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccccccC
Confidence 00000000000000001111111111100 00000010110 011111 11111122222 22111111
Q ss_pred cchh----hHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhc
Q 001291 552 TDGG----IYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVI 627 (1106)
Q Consensus 552 ~~~~----~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~ 627 (1106)
.+.. .|....+...++.++.++....+.+.....++. -+-+.+++.||+||++
T Consensus 855 ~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~------------~ml~~Ilrapm~FFdt----------- 911 (1381)
T KOG0054|consen 855 VSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHD------------KLLNSILRAPMSFFDT----------- 911 (1381)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHhCcchhcCC-----------
Confidence 1222 233333333333333333332223222222222 2456788889999775
Q ss_pred cccCchhHHHHHH---------HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhc---c-cCccchhhH
Q 001291 628 GYDPNAGRFFKQY---------LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGF---V-LSREEVKKW 694 (1106)
Q Consensus 628 g~~~~~~rf~~~~---------l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf---~-i~~~~ip~~ 694 (1106)
...||.+++| .+.+.+..++..+..+++.++....+...+..+++.+++++..+ + -...++++.
T Consensus 912 ---TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRL 988 (1381)
T KOG0054|consen 912 ---TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRL 988 (1381)
T ss_pred ---CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 3357777665 45666666677777766666544343333333333333332211 1 111122211
Q ss_pred HHHHHhhcHHHHHHHHHHHHhhcCCCcccccCCCccchHHHHhhc--------ccccccchhhHHHHHHHHHHHHHHHHH
Q 001291 695 WKWAYWSSPVMYAQNGILANEFLGHSWKKFTPTSTESLGVQVLES--------REFFAHAYWYWLGLGALFGFILLLNVG 766 (1106)
Q Consensus 695 ~~w~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~--------~~~~~~~~~~w~~~~~l~~~~~~f~i~ 766 (1106)
- ..-.||++.++...+..--.-+.|.... ..-.+.... +-+.....|+.+.+-.+..+++++..+
T Consensus 989 e--sitRSPi~sh~~Etl~GlsTIRAf~~~~-----rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al 1061 (1381)
T KOG0054|consen 989 E--SITRSPIYSHFSETLQGLSTIRAFGKEE-----RFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAAL 1061 (1381)
T ss_pred h--hcccchHHHhHHHHhcCcceeeeccccH-----HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1124677766665554333333332210 000000000 001112234333333333322222222
Q ss_pred HHHHHHhccccCCCccccccccccccccccccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCC--CCcee
Q 001291 767 FALALTFLNQFEKPRAVITEEFESDEQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPF--EPYSL 844 (1106)
Q Consensus 767 ~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~l 844 (1106)
+++... -.. ..+..+.-...+...-.....+.++...+.|..+.+.+|..++...+.++++....+...+- ....+
T Consensus 1062 ~~vl~~-~~~-~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I 1139 (1381)
T KOG0054|consen 1062 FAVLLP-SGL-ISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEI 1139 (1381)
T ss_pred HHHHcc-CCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeE
Confidence 211110 000 00000000000000000000012222222233334444443332211121111111100111 22368
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.|+|++-+|. .+-..|||||||+|+|||++||||++|||||||+++|.+...+ .+|+|.|||.++.+
T Consensus 1140 ~f~~~~~RYr-----------p~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~--~~G~I~IDgvdI~~ 1206 (1381)
T KOG0054|consen 1140 EFEDLSLRYR-----------PNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEP--AEGEILIDGVDISK 1206 (1381)
T ss_pred EEEEeEEEeC-----------CCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCc--cCCeEEEcCeeccc
Confidence 9999764442 1223699999999999999999999999999999999997653 58999999999865
Q ss_pred ---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccC------CCCCCC
Q 001291 925 ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVG------LPGVNG 995 (1106)
Q Consensus 925 ---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~------~~g~~~ 995 (1106)
.+.|++++.+||+|.++. -|+|.|| |+..+..++.++++||.++|++......+ .+|+.+
T Consensus 1207 igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N 1275 (1381)
T KOG0054|consen 1207 IGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGEN 1275 (1381)
T ss_pred ccHHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCcc
Confidence 457888999999998764 4665554 77778888899999999999865533221 135567
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 996 LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
+|.||||.+||||||+++++||+|||+|+++|+++...|+++||+.++ +||||+|+|+++. + ..+|||+||++ |++
T Consensus 1276 ~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~T-V-md~DrVlVld~-G~v 1351 (1381)
T KOG0054|consen 1276 FSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLNT-V-MDSDRVLVLDA-GRV 1351 (1381)
T ss_pred CChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccch-h-hhcCeEEEeeC-CeE
Confidence 999999999999999999999999999999999999999999999875 7999999999974 4 56899999986 799
Q ss_pred EEEecCCCc
Q 001291 1076 VYVGPLGHH 1084 (1106)
Q Consensus 1076 ~~~G~~~~~ 1084 (1106)
+++|++.+.
T Consensus 1352 ~EfdsP~~L 1360 (1381)
T KOG0054|consen 1352 VEFDSPAEL 1360 (1381)
T ss_pred eecCChHHH
Confidence 999998753
No 10
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-77 Score=733.07 Aligned_cols=584 Identities=24% Similarity=0.360 Sum_probs=488.1
Q ss_pred cceEEEeeeEEEEEEecccccCCChhhHhHHHHHHHhhhhhcCCCccccceeeeceeEEEeCceEEEEEcCCCCCHHHHH
Q 001291 116 TVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLL 195 (1106)
Q Consensus 116 ~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 195 (1106)
+..+.++|+.+-.+.... .+.+..++.+|+||||.++||.+|||||+|||||||||
T Consensus 779 ~~~~~~~~V~~w~dl~~~------------------------~~~qG~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLL 834 (1391)
T KOG0065|consen 779 PLSLTFKDVFYWVDLPYE------------------------MPIQGGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLL 834 (1391)
T ss_pred cccccccceEEEEeCCcc------------------------ccccccceEhhhcCceEecCCceeehhcCCCCchHHHH
Confidence 356777887777765321 12233567899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCC
Q 001291 196 LALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGI 275 (1106)
Q Consensus 196 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~ 275 (1106)
++|||+... +.++|+|.+||.+.++...+|.+|||.|+|.|.+++||||.|.|+|.++... ++
T Consensus 835 dvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~-------~v--------- 897 (1391)
T KOG0065|consen 835 DVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPK-------EV--------- 897 (1391)
T ss_pred HHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCC-------cC---------
Confidence 999999755 4689999999999987677899999999999999999999999999887321 12
Q ss_pred CCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhhhhHHHHHHHHhcCC-ccceeecCCCCC
Q 001291 276 KPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPA-LALFMDEISTGL 354 (1106)
Q Consensus 276 ~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p-~vllLDEptsgL 354 (1106)
..++..+.||++++.|+|++++|.+||..+ .|||..||||++||..|+.+| .|||||||||||
T Consensus 898 ---------------~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGL 961 (1391)
T KOG0065|consen 898 ---------------SDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGL 961 (1391)
T ss_pred ---------------CHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCc
Confidence 122344689999999999999999999877 999999999999999999999 999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec-CCeEEEEcCHH----HHHHHHHhcC-CCCCCCCC
Q 001291 355 DSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS-DGQIVYQGPRE----LVLEFFESMG-FKCPKRKG 428 (1106)
Q Consensus 355 D~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~-~G~iv~~G~~~----~~~~~f~~~G-~~~p~~~~ 428 (1106)
|+.++..|++.+|+++. .|+|++|+||||+.++++.||++++|+ +|++||.||.. .+++||++.| .+||...|
T Consensus 962 DsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~~~~~~N 1040 (1391)
T KOG0065|consen 962 DSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVKCISDEN 1040 (1391)
T ss_pred cHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCccCCCCCC
Confidence 99999999999999987 799999999999999999999999995 79999999974 5678999987 89999999
Q ss_pred hhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhc---CCccccccccccccCCcccccHHHHH
Q 001291 429 VADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQ---TPFDKSKSHRAALTTKVYGVGKRELL 505 (1106)
Q Consensus 429 ~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (1106)
||||+.|+++...+.. ...++++.|+.+...++..++++ .+.+. ........+.|..++|.|+
T Consensus 1041 PA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~ 1106 (1391)
T KOG0065|consen 1041 PAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRNKELVKELSQPPPG--FSTDLEFKTRFAQSLWYQF 1106 (1391)
T ss_pred hHHHHHhhcccccccc------------cCccHHHHHhccHHHHHHHHHHHHHhcCCcc--CCcccccccccchhHHHHH
Confidence 9999999987543321 12378899999988877766543 33332 1223344566999999999
Q ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHHHHHHHHHHHHhHHH-HHHHHhhhch
Q 001291 506 KACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFA-EISMTIVKLP 584 (1106)
Q Consensus 506 ~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~ 584 (1106)
+.|++|++...||++.+...|++..++.++++|..||+++ .+.++.++.++++|.++++...+... ..+..-.++-
T Consensus 1107 k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g---~~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~ 1183 (1391)
T KOG0065|consen 1107 KLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVG---HNVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERL 1183 (1391)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecC---CcHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhh
Confidence 9999999999999999999999999999999999999887 34667788889988887766554333 3444556888
Q ss_pred hhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccH
Q 001291 585 VFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNL 664 (1106)
Q Consensus 585 vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~ 664 (1106)
+++|||..++|+..+|+++..++++|+.++.+++|.+++||++||..++.+|+.+++..+++......++.++.+++|+.
T Consensus 1184 y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~ 1263 (1391)
T KOG0065|consen 1184 YEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNL 1263 (1391)
T ss_pred heeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCCccccc-------CCCccchHHHHh
Q 001291 665 VVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKKFT-------PTSTESLGVQVL 737 (1106)
Q Consensus 665 ~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~~~~~~-------~~~~~~~g~~~l 737 (1106)
.+|..+.+++..++.+|+||+++++.||.||+|+||+||+.|..++++...+++..-.|.. |....+.|....
T Consensus 1264 ~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~ 1343 (1391)
T KOG0065|consen 1264 QTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFME 1343 (1391)
T ss_pred hHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999977655533 223345666555
Q ss_pred hccc----ccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 001291 738 ESRE----FFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQ 776 (1106)
Q Consensus 738 ~~~~----~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~ 776 (1106)
..++ +..+... ....+.+++.+.+.+++.+.++|.+.
T Consensus 1344 ~~~~~~~Gy~~n~~a--~~~c~~c~y~v~~~~l~~f~~~y~~~ 1384 (1391)
T KOG0065|consen 1344 DFFGEGTGYLHNPLA--TTACVYCAYTVADAFLAAFNIKYLNF 1384 (1391)
T ss_pred HHhccCcceeccCcc--eeEEEEeeeehHHHHHHHHHHHHHHH
Confidence 5445 2211110 11122344556666677777777654
No 11
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.4e-74 Score=756.47 Aligned_cols=559 Identities=24% Similarity=0.341 Sum_probs=458.8
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCH
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1106)
++.+|+|||+.++||++++|+|||||||||||++|+|+.++....+|+|.+||+++.. ..++.++||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 3579999999999999999999999999999999999987321237999999998753 246789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+|||.|+++++.... .. .++....++++++.+||++++|+.||+. ..+
T Consensus 854 ~E~L~~~a~l~~~~~-------~~------------------------~~~~~~~v~~~l~~l~L~~~~d~~v~~~-~~~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKS-------VS------------------------KSEKMEYVEEVIKLLEMESYADAVVGVP-GEG 901 (1394)
T ss_pred HHHHHHHHHhCCCCC-------CC------------------------HHHHHHHHHHHHHHcCChhhCCCeeCCC-CCC
Confidence 999999987652110 00 1112346788999999999999999964 347
Q ss_pred CChhhhhHHHHHHHHhcCCc-cceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC-
Q 001291 324 VSGGQKKRVTTGEMMVGPAL-ALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG- 401 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~-vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G- 401 (1106)
|||||||||+||++|+.+|+ ||||||||||||+.++..+++.|+++++ .++|+|+++|||...+++.||+|++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999997 9999999999999999999999999875 57899999999988888999999999987
Q ss_pred eEEEEcCH----HHHHHHHHhcCC-CCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhh
Q 001291 402 QIVYQGPR----ELVLEFFESMGF-KCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSD 476 (1106)
Q Consensus 402 ~iv~~G~~----~~~~~~f~~~G~-~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1106)
+++|+|+. +++.+||++.|+ +||++.|||||+.++.+...... ...++.+.|+.+...+...+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 678999999996 99999999999999876422110 01234556665554443332
Q ss_pred hhc---CCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccc
Q 001291 477 ELQ---TPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTD 553 (1106)
Q Consensus 477 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~ 553 (1106)
++. .+.............+.|..+++.|++.+++|.++..+|++.+.+.|+++.+++|+++|++||+.+.+ ..+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHH
Confidence 221 11110000001112246889999999999999999999999999999999999999999999987643 345
Q ss_pred hhhHHHHHHHHHHHHHHhHHHHHHHHhhhchhh-HHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCc
Q 001291 554 GGIYAGALFFTIVMPLFSGFAEISMTIVKLPVF-YKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPN 632 (1106)
Q Consensus 554 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf-~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~ 632 (1106)
.+..+|++|+.+++..+.....++.++.++++| +|||.+++|++++|++++.+.++|+.++.+++|.+++|||+|+.++
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 677888888887766555445566677777764 9999999999999999999999999999999999999999999987
Q ss_pred hhH-------HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHH
Q 001291 633 AGR-------FFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVM 705 (1106)
Q Consensus 633 ~~r-------f~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~ 705 (1106)
+.. |+.++++.+++..++.+++.++++++++..+|..++++++.++++|+||++++++||.||+|++|+||++
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 755 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCcccccC-------------------------------CC---c----cchHHHHhhcccccccch
Q 001291 706 YAQNGILANEFLGHSWKKFTP-------------------------------TS---T----ESLGVQVLESREFFAHAY 747 (1106)
Q Consensus 706 y~~~al~~nef~~~~~~~~~~-------------------------------~~---~----~~~g~~~l~~~~~~~~~~ 747 (1106)
|++++++.|||.+....|... +. + ...|.++|+..++....
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~- 1364 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSG- 1364 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccc-
Confidence 999999999999877655320 00 1 23677788877765444
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001291 748 WYWLGLGALFGFILLLNVGFALALTFL 774 (1106)
Q Consensus 748 ~~w~~~~~l~~~~~~f~i~~~l~L~~~ 774 (1106)
.|.+++++++|++++ ++.++++.|.
T Consensus 1365 -~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1365 -RWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred -cccchhhhhHHHHHH-HHHHHhhheE
Confidence 578888899888777 6666777665
No 12
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=6e-72 Score=730.26 Aligned_cols=798 Identities=20% Similarity=0.271 Sum_probs=482.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 943 k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~Pt---sG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LT 1019 (2272)
T TIGR01257 943 RPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPT---SGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLT 1019 (2272)
T ss_pred ceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCC---ceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCC
Confidence 56999999999999999999999999999999999999998 999999999875321 2467999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+|||.|.++.++... .+.+..++.+++.+||++..|+.+++
T Consensus 1020 V~E~L~f~~~lkg~~~----------------------------------~~~~~~v~~lL~~vgL~~~~~~~~~~---- 1061 (2272)
T TIGR01257 1020 VAEHILFYAQLKGRSW----------------------------------EEAQLEMEAMLEDTGLHHKRNEEAQD---- 1061 (2272)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCChhh----
Confidence 9999999877654210 01123467789999999999988876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+++|+|++|||||+|||+.++..+++.|+++. . +++|+.++|+.+++..++|+|++|++|+
T Consensus 1062 -LSGGqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~--~-g~TIIltTHdmdea~~laDrI~iL~~Gk 1137 (2272)
T TIGR01257 1062 -LSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR--S-GRTIIMSTHHMDEADLLGDRIAIISQGR 1137 (2272)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--C-CCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999873 3 4556668899999999999999999999
Q ss_pred EEEEcCHHHHHHHHHhcCCC-------------------------------CCCCC-----------C---hhHHHHhhc
Q 001291 403 IVYQGPRELVLEFFESMGFK-------------------------------CPKRK-----------G---VADFLQEVT 437 (1106)
Q Consensus 403 iv~~G~~~~~~~~f~~~G~~-------------------------------~p~~~-----------~---~ad~l~~v~ 437 (1106)
+++.|+.+++.+.|.. ||. ||... + +.++++...
T Consensus 1138 L~~~Gs~~~Lk~~~g~-gy~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~i 1216 (2272)
T TIGR01257 1138 LYCSGTPLFLKNCFGT-GFYLTLVRKMKNIQSQRGGCEGTCSCTSKGFSTRCPARVDEITPEQVLDGDVNELMDLVYHHV 1216 (2272)
T ss_pred EEEecCHHHHHHhcCC-cEEEEEEecccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHhC
Confidence 9999999999876532 332 11000 1 112222211
Q ss_pred Cchhhhhhhh---ccCCCCcccCHHHHHHHHhhchhh------------hhhhhh--------hcC--------------
Q 001291 438 SKKDQEQYWA---HKDRPYRFVKVQEFVAAFQSFHVG------------QKLSDE--------LQT-------------- 480 (1106)
Q Consensus 438 s~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~--------~~~-------------- 480 (1106)
.......... .-..|........|...|+.-+.. ....++ ...
T Consensus 1217 P~a~l~~~~g~el~y~LP~~~~~~~~f~~lf~~Le~~~~~lgi~sygis~tTLEeVFlkv~~~~~~~~~~~~~~~~~~~~ 1296 (2272)
T TIGR01257 1217 PEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDADSGSLFAGGAQQKREN 1296 (2272)
T ss_pred CCcEEEeccCCEEEEEecccccccchHHHHHHHHHhhHhhCCCceEEeecCCHHHHHHHhhhhccccccccccccccccc
Confidence 0000000000 000011111001232322211100 000000 000
Q ss_pred ---------Ccccccc-cc-------c--------------cccCCcc---cccHHHHHHHHHHHHHHHHhcChHHHHHH
Q 001291 481 ---------PFDKSKS-HR-------A--------------ALTTKVY---GVGKRELLKACTSRELLLMKRNSFVYIFK 526 (1106)
Q Consensus 481 ---------~~~~~~~-~~-------~--------------~~~~~~~---~~~~~~~~~~l~~R~~l~~~R~~~~~~~~ 526 (1106)
+.+.... .. . ....... ..-++.|+++++...++..+|++...++.
T Consensus 1297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~L~~qQf~All~KR~~~~~Rd~k~~~~q 1376 (2272)
T TIGR01257 1297 ANLRHPCSGPTEKAGQTPQASHTCSPGQPAAHPEGQPPPEPEDPGVPLNTGARLILQHVQALLVKRFQHTIRSHKDFLAQ 1376 (2272)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 0000000 00 0 0000000 01256789999999999999998877666
Q ss_pred HHHHHH---HHHHHHHH----------------H------cccc------------------------------------
Q 001291 527 LIQIGS---ITLVYMTL----------------F------FRTK------------------------------------ 545 (1106)
Q Consensus 527 ~~~~~~---~~li~g~~----------------f------~~~~------------------------------------ 545 (1106)
++.-++ +++++..+ | +..+
T Consensus 1377 illPi~fv~lal~~~~~~~~~~~~p~l~Ls~~~Y~~~~~~~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1456 (2272)
T TIGR01257 1377 IVLPATFVFLALMLSIIIPPFGEYPALTLHPWMYGQQYTFFSMDEPNSEHLEVLADVLLNKPGFGNRCLKEEWLPEYPCG 1456 (2272)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCeecchhhccCcceeccccccccccccchhhhhhccccccccccccccccccccc
Confidence 553322 22221110 0 0000
Q ss_pred C------C----------------------------------------------C--------C---ccc--chhhH---
Q 001291 546 M------H----------------------------------------------K--------D---SVT--DGGIY--- 557 (1106)
Q Consensus 546 ~------~----------------------------------------------~--------~---~~~--~~~~~--- 557 (1106)
. + + + ... +...|
T Consensus 1457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~n~sdyll~ 1536 (2272)
T TIGR01257 1457 NSTPWKTPSVSPNITHLFQKQKWTAAHPSPSCRCSTREKLTMLPECPEGAGGLPPPQRTQRSTEILQDLTDRNISDFLVK 1536 (2272)
T ss_pred ccccccccchhHHHHHHHhhccccccccccccccccccccccccccccccccCCCcccccccchhhhhhcccchHHHHhh
Confidence 0 0 0 0 000 00000
Q ss_pred ----------------------------------------HHHH------------------------H-----------
Q 001291 558 ----------------------------------------AGAL------------------------F----------- 562 (1106)
Q Consensus 558 ----------------------------------------~g~l------------------------f----------- 562 (1106)
.++. |
T Consensus 1537 ~~~~~~~~~~~~~~~~~~~ry~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1616 (2272)
T TIGR01257 1537 TYPALIRSSLKSKFWVNEQRYGGISIGGKLPAIPITGEALVGFLSDLGQMMNVSGGPVTREASKEMPDFLKHLETEDNIK 1616 (2272)
T ss_pred hhhhhhccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccccccchhhhhhhccccCcceE
Confidence 0000 0
Q ss_pred --H---------HHHHHHHhHH----------------------------------------------------HHHHHH
Q 001291 563 --F---------TIVMPLFSGF----------------------------------------------------AEISMT 579 (1106)
Q Consensus 563 --f---------~l~~~~~~~~----------------------------------------------------~~~~~~ 579 (1106)
| ..+..+.+++ +-++..
T Consensus 1617 vwfNn~~~Hs~p~~lN~l~NaiLr~~~~~~~~~~~~~I~v~N~Plp~t~~~~~~~~~~~~~~~~~iai~ii~~~sfi~as 1696 (2272)
T TIGR01257 1617 VWFNNKGWHALVSFLNVAHNAILRASLPKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPAS 1696 (2272)
T ss_pred EEEcCCcccHHHHHHHHHHHHHHHHhcccccCCccceEEEEecCCCCchhhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Confidence 0 0000000000 000001
Q ss_pred hhhchhhHHhhhcC--------CcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhh--ccccCchhHHHHHHHHHHHHHHH
Q 001291 580 IVKLPVFYKQRDFK--------FFPPWAYAIPSWILKIPISFLEPAVWVFLSYYV--IGYDPNAGRFFKQYLLLLAFNQM 649 (1106)
Q Consensus 580 ~~~~~vf~kqr~~~--------~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~--~g~~~~~~rf~~~~l~~~~~~~~ 649 (1106)
+.-.+| +||..+ =-++.+|++++++.++.+-++..++..++++.. -+|. +...+...++++++...+
T Consensus 1697 fv~~~V--~ER~skaK~lQ~vSGv~~~~YWls~fl~D~~~y~i~~~~~i~i~~~f~~~~~~-~~~~l~~~~lll~lyG~a 1773 (2272)
T TIGR01257 1697 FVLYLI--QERVNKAKHLQFISGVSPTTYWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYT-SPENLPALVALLMLYGWA 1773 (2272)
T ss_pred Hheeee--hHHhhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhc-CcchHHHHHHHHHHHHHH
Confidence 111111 222221 126788999999999888777666555444322 1222 223454555667777777
Q ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHH---HHHHHhhc----ccC---ccchhhHHHHHHhhcHHHHHHHHHHH---Hhh
Q 001291 650 ISGLFRFLGAIGRNLVVAYTFGSFAVL---VLLALGGF----VLS---REEVKKWWKWAYWSSPVMYAQNGILA---NEF 716 (1106)
Q Consensus 650 ~~~l~~~i~~i~~~~~ia~~~~~~~~l---~~~l~~Gf----~i~---~~~ip~~~~w~~~isP~~y~~~al~~---nef 716 (1106)
+..+.++++-++.+...|+....++.+ ++..+..| +-. ...+...+.|++.+.|.+---+++.. +..
T Consensus 1774 ~ip~tYl~SflF~~~~~A~~~~~~in~~~G~~~~i~~~il~~~~~~~~~~~~~~~l~~if~i~P~f~lg~gl~~l~~~~~ 1853 (2272)
T TIGR01257 1774 VIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFVLELFENNRTLLRFNAMLRKLLIVFPHFCLGRGLIDLALSQA 1853 (2272)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHeeCchhhhHHHHHHHHHhHH
Confidence 777778877777766555443221111 11111112 111 12234677888888886544344321 111
Q ss_pred cCCCcccccCCCccchHHHHhhcccccccchhhHHHHH----HHHHH-HHHHHHHHHHHHHhccccCCCccccccccccc
Q 001291 717 LGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLG----ALFGF-ILLLNVGFALALTFLNQFEKPRAVITEEFESD 791 (1106)
Q Consensus 717 ~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~----~l~~~-~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~ 791 (1106)
....+.. .+.. .....|-|-.+| +++.. +++|.++..+-..+... +....... .
T Consensus 1854 ~~~~~~~--------~~~~-------~~~~~~~~~~~g~~ll~m~~~~iv~flLl~~ie~~~~~~----~~~~~~~~--~ 1912 (2272)
T TIGR01257 1854 VTDVYAQ--------FGEE-------HSANPFQWDLIGKNLVAMAVEGVVYFLLTLLIQHHFFLS----RWIAEPAK--E 1912 (2272)
T ss_pred HHHHHHh--------hccc-------ccCCccchhhccHHHHHHHHHHHHHHHHHHHHHhhhhhh----hhccccCc--C
Confidence 0000000 0000 000112222111 11111 11111111111111100 00000000 0
Q ss_pred cccccccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEE
Q 001291 792 EQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVL 871 (1106)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~ 871 (1106)
. ... +..+...+.. ....+ ......+.++|+++.++. +++.+
T Consensus 1913 -------~------------~~~----eD~DV~~Er~-rV~~~---~~~~~~L~v~nLsK~Y~~-----------~~~~a 1954 (2272)
T TIGR01257 1913 -------P------------IFD----EDDDVAEERQ-RIISG---GNKTDILRLNELTKVYSG-----------TSSPA 1954 (2272)
T ss_pred -------c------------CCC----chhHHHHHHH-HHhcc---CCCCceEEEEEEEEEECC-----------CCceE
Confidence 0 000 0000000000 00000 001124788898877641 12569
Q ss_pred eeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCHHHH
Q 001291 872 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVTVYES 949 (1106)
Q Consensus 872 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~g~v~q~~~~~~~~tv~e~ 949 (1106)
|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+|||+|++.+.+.+|++|+
T Consensus 1955 L~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~ 2032 (2272)
T TIGR01257 1955 VDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREH 2032 (2272)
T ss_pred EEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEECcchHHHHhhhEEEEeccccCCCCCCHHHH
Confidence 9999999999999999999999999999999998764 48999999988642 2235679999999999999999999
Q ss_pred HHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHH
Q 001291 950 LFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1106)
Q Consensus 950 l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~ 1029 (1106)
+.+.+.++. ...++.++.++++++.++|.+..++.++ +|||||||||+||+||+.+|+||||||||+|||+.
T Consensus 2033 L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGLDp~ 2104 (2272)
T TIGR01257 2033 LYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQ 2104 (2272)
T ss_pred HHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHH
Confidence 988766553 2334445668899999999988887753 69999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1030 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1030 ~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
+++.+++.|++++++|+|||+|||+++ ++...|||+++|++ |++++.|+..
T Consensus 2105 sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs~q 2155 (2272)
T TIGR01257 2105 ARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGTIQ 2155 (2272)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999878999999999997 67888999999985 7999998764
No 13
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.8e-71 Score=731.92 Aligned_cols=213 Identities=24% Similarity=0.320 Sum_probs=178.5
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..+.|+||+++|+. +..++|+||||+|+|||++||+|+||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEe
Confidence 36999999998842 123699999999999999999999999999999999998764 58999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccc-------cccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-------SLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~~~~ 991 (1106)
+++ ..+|+.++||||++.++. -|++|||.++. +..++.++++++.+++.+..+ ..++..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~-GTIreNLd~~~----------~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFS-GTVRFNLDPFN----------EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCcccc-ccHHHHhCcCC----------CCCHHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 754 456788999999999886 59999996531 113445788888888865443 333433
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
| .+||||||||++|||||+++|+||+||||||+||.++.+.|++.|++.. +++|||+|+|+++. ...||+|++|++
T Consensus 1372 G-~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~t--I~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 G-ENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLNT--IIDCDRILVLDA 1447 (1622)
T ss_pred C-CCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChHH--HHhCCEEEEEEC
Confidence 3 4699999999999999999999999999999999999999999999985 48999999999973 567999999985
Q ss_pred CCEEEEEecCCC
Q 001291 1072 GGREVYVGPLGH 1083 (1106)
Q Consensus 1072 gG~~~~~G~~~~ 1083 (1106)
|++++.|++.+
T Consensus 1448 -G~IvE~Gt~~e 1458 (1622)
T PLN03130 1448 -GRVVEFDTPEN 1458 (1622)
T ss_pred -CEEEEeCCHHH
Confidence 79999998653
No 14
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.3e-70 Score=724.11 Aligned_cols=212 Identities=21% Similarity=0.287 Sum_probs=177.9
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.++|+||+++|+. +..++|+||||+|+|||++||+|+||||||||+++|.|..++ .+|+|.|||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEEh
Confidence 6899999998841 124699999999999999999999999999999999998764 589999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccc-------cccCCCC
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-------SLVGLPG 992 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~~~~g 992 (1106)
++ ..+++.++||||++.+++ -|++|||.++. + ..++.++++++..++.+..+ ..++..|
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~-gTIr~NL~~~~------~----~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1369 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFS-GTVRFNIDPFS------E----HNDADLWEALERAHIKDVIDRNPFGLDAEVSEGG 1369 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeC-ccHHHHcCCCC------C----CCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCC
Confidence 54 456788999999998886 59999996431 1 22345788899888876443 3334333
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
.+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+|+|+++ ....||+|++|++
T Consensus 1370 -~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~- 1444 (1495)
T PLN03232 1370 -ENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS- 1444 (1495)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-
Confidence 4699999999999999999999999999999999999999999999875 4899999999986 3567999999985
Q ss_pred CEEEEEecCCC
Q 001291 1073 GREVYVGPLGH 1083 (1106)
Q Consensus 1073 G~~~~~G~~~~ 1083 (1106)
|++++.|++.+
T Consensus 1445 G~ivE~Gt~~e 1455 (1495)
T PLN03232 1445 GQVLEYDSPQE 1455 (1495)
T ss_pred CEEEEECCHHH
Confidence 79999998653
No 15
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=9.1e-68 Score=610.29 Aligned_cols=475 Identities=28% Similarity=0.345 Sum_probs=362.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC-CCceeEEEECCccCCCCCc-------cceEEEEcCCC-
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS-LKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD- 235 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1106)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999886 4568999999997654432 26799999995
Q ss_pred -CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccc
Q 001291 236 -NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1106)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
.+-|-+||.+.|.-..+.++... .++...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 46677999998887665543211 12234567788999999987665
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
+.+...|||||||||.||+||+.+|++|++||||++||..++.+|++.|+++.+ ..++.++.++|+..-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCe
Confidence 345567999999999999999999999999999999999999999999999875 4678888899999999999999
Q ss_pred EEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhh
Q 001291 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKL 474 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1106)
|+||.+|++|+.|+.++++.. |. .||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p~-------------------------hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------PQ-------------------------HPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------cC-------------------------CcccH-----------------HH
Confidence 999999999999999998641 11 01100 00
Q ss_pred hhhhcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccch
Q 001291 475 SDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDG 554 (1106)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~ 554 (1106)
.+
T Consensus 255 l~------------------------------------------------------------------------------ 256 (539)
T COG1123 255 LA------------------------------------------------------------------------------ 256 (539)
T ss_pred Hh------------------------------------------------------------------------------
Confidence 00
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchh
Q 001291 555 GIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAG 634 (1106)
Q Consensus 555 ~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 634 (1106)
..|.....
T Consensus 257 ---------------------------a~p~~~~~--------------------------------------------- 264 (539)
T COG1123 257 ---------------------------AVPRLGDE--------------------------------------------- 264 (539)
T ss_pred ---------------------------hCCCcccc---------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHH
Q 001291 635 RFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILAN 714 (1106)
Q Consensus 635 rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~n 714 (1106)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccc
Q 001291 715 EFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQD 794 (1106)
Q Consensus 715 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~ 794 (1106)
..
T Consensus 265 -------~~----------------------------------------------------------------------- 266 (539)
T COG1123 265 -------KI----------------------------------------------------------------------- 266 (539)
T ss_pred -------cc-----------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeee
Q 001291 795 NRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNG 874 (1106)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~ 874 (1106)
. . ... . . . .+ ...-++.+|++-.|..+..+- +...+...+++|
T Consensus 267 --~-~------------~~~-----~----~--~--------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~ 309 (539)
T COG1123 267 --I-R------------LPR-----R----G--P--------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDD 309 (539)
T ss_pred --c-c------------ccc-----c----c--c--------cc-cCceeEeeeeeeeeccccccc--cccccceeeeee
Confidence 0 0 000 0 0 0 00 001234445443333322110 000123569999
Q ss_pred eeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC--C---hhcccceEEEEccCCC--CCCCCCHH
Q 001291 875 VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK--K---QETFARISGYCEQNDI--HSPFVTVY 947 (1106)
Q Consensus 875 vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~g~v~q~~~--~~~~~tv~ 947 (1106)
|||++++||++||||+||||||||.++|+|..++ ..|.|.++|.+. . ....++.+-+++|++. +.|.+||.
T Consensus 310 VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~ 387 (539)
T COG1123 310 VSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVG 387 (539)
T ss_pred eeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHH
Confidence 9999999999999999999999999999998774 589999999762 1 1224456778888775 56889999
Q ss_pred HHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001291 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1106)
Q Consensus 948 e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgL 1026 (1106)
+.+.-...... .....++++++.++++.++|.+ +.++. +.+||||||||++|||||+.+|++|++|||||.|
T Consensus 388 ~~i~epL~~~~--~~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaL 460 (539)
T COG1123 388 DILAEPLRIHG--GGSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSAL 460 (539)
T ss_pred HHHHhHHhhhc--ccchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCcccc
Confidence 99876544332 2224566678999999999986 45554 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1027 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1027 D~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
|+..++.|.++|+++.++ |.|.|+||||+.. +...|||+++|++ |++|+.|+..
T Consensus 461 Dvsvqa~VlnLl~~lq~e~g~t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~~ 515 (539)
T COG1123 461 DVSVQAQVLNLLKDLQEELGLTYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPTE 515 (539)
T ss_pred CHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCHH
Confidence 999999999999999765 9999999999985 7788999999985 7999999643
No 16
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=9.3e-68 Score=695.70 Aligned_cols=217 Identities=18% Similarity=0.312 Sum_probs=179.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc-------------
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------- 909 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~------------- 909 (1106)
.+.|+||+|+|+.. ++.++|+|+||+|+||+++||+||||||||||+++|+|...+.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 69999999998642 1246999999999999999999999999999999999976541
Q ss_pred ---------------------------------------eeEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHH
Q 001291 910 ---------------------------------------YITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVTVY 947 (1106)
Q Consensus 910 ---------------------------------------~~~G~i~i~g~~~~~---~~~~~~~g~v~q~~~~~~~~tv~ 947 (1106)
+.+|.|.+||.++++ ..+++.+|||+|++.++ ..|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHH
Confidence 148999999998754 45678899999999887 48999
Q ss_pred HHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEe
Q 001291 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1020 (1106)
Q Consensus 948 e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLD 1020 (1106)
|||.|+. .+. .++.++++++..++.++. |..+|..| ..||||||||++|||||+++|+|||||
T Consensus 1314 eNI~~g~-----~~a----t~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK-----EDA----TREDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC-----CCC----CHHHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9999872 122 233477788887776543 44555444 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hCCceEEEEecCccHHHHHhcCeEEEEecC---CE-EEEEecCC
Q 001291 1021 EPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GR-EVYVGPLG 1082 (1106)
Q Consensus 1021 EPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g---G~-~~~~G~~~ 1082 (1106)
||||+||+++++.|++.|+++. .+|+|+|+|+|+++ ..+.||+|++|++| |+ +++.|+..
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth~ 1448 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTHE 1448 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCHH
Confidence 9999999999999999999985 35899999999986 46789999999973 66 45788743
No 17
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.7e-68 Score=706.43 Aligned_cols=213 Identities=18% Similarity=0.230 Sum_probs=178.3
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..+.|+||+++|+.. ..++|+||||+|+|||++||+|+||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~--~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES--AEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC--CCCeEEECCEE
Confidence 369999999988531 23599999999999999999999999999999999998763 57999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~~~ 991 (1106)
+++ ..+++.++||||++.++. -|++|||.... +..++.++++++.+++.+.. |..++..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~-gTIr~NLdp~~----------~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFS-GSLRMNLDPFS----------QYSDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccC-ccHHHHcCccc----------CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 764 456788999999999886 59999995211 12234578899998887644 3334433
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
| .+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|++
T Consensus 1419 G-~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 G-ENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred C-CcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 3 4699999999999999999999999999999999999999999999875 4899999999986 4577999999985
Q ss_pred CCEEEEEecCCC
Q 001291 1072 GGREVYVGPLGH 1083 (1106)
Q Consensus 1072 gG~~~~~G~~~~ 1083 (1106)
|++++.|++.+
T Consensus 1495 -G~IvE~G~~~e 1505 (1522)
T TIGR00957 1495 -GEVAEFGAPSN 1505 (1522)
T ss_pred -CEEEEECCHHH
Confidence 79999998654
No 18
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-66 Score=625.03 Aligned_cols=459 Identities=22% Similarity=0.308 Sum_probs=349.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEECCccCCCCCc----cceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALV 94 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccC
Confidence 3699999999999999999999999999999999999986 5 8999999998764332 35699999998889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.|+......+. .. ..+....++.+++.+||++..++.+++
T Consensus 95 ~~~tv~e~l~~~~~~~~~~~-------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 143 (506)
T PRK13549 95 KELSVLENIFLGNEITPGGI-------MD------------------------YDAMYLRAQKLLAQLKLDINPATPVGN 143 (506)
T ss_pred CCCcHHHHhhhcccccccCC-------cC------------------------HHHHHHHHHHHHHHcCCCCCcccchhh
Confidence 99999999998753211000 00 001123467789999999888888766
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||+|++|
T Consensus 144 -----LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l 216 (506)
T PRK13549 144 -----LGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVI 216 (506)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999998853 3 456677889999999999999999
Q ss_pred cCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhh
Q 001291 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDEL 478 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1106)
++|++++.|+.+++.. .+..
T Consensus 217 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~---------------- 236 (506)
T PRK13549 217 RDGRHIGTRPAAGMTE--------------------------------------------DDII---------------- 236 (506)
T ss_pred ECCEEeeecccccCCH--------------------------------------------HHHH----------------
Confidence 9999998876432200 0000
Q ss_pred cCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHH
Q 001291 479 QTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYA 558 (1106)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~ 558 (1106)
+ .++ + ..
T Consensus 237 --------------------------------~----------------------------~~~--~--~~--------- 243 (506)
T PRK13549 237 --------------------------------T----------------------------MMV--G--RE--------- 243 (506)
T ss_pred --------------------------------H----------------------------Hhh--C--cC---------
Confidence 0 000 0 00
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHH
Q 001291 559 GALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFK 638 (1106)
Q Consensus 559 g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~ 638 (1106)
.
T Consensus 244 ------------------------------------------------------------------------~------- 244 (506)
T PRK13549 244 ------------------------------------------------------------------------L------- 244 (506)
T ss_pred ------------------------------------------------------------------------c-------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcC
Q 001291 639 QYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLG 718 (1106)
Q Consensus 639 ~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~ 718 (1106)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccccc
Q 001291 719 HSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIG 798 (1106)
Q Consensus 719 ~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1106)
. . ...
T Consensus 245 ---~------~----------------------------------------------~~~-------------------- 249 (506)
T PRK13549 245 ---T------A----------------------------------------------LYP-------------------- 249 (506)
T ss_pred ---c------c----------------------------------------------ccc--------------------
Confidence 0 0 000
Q ss_pred CcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeee
Q 001291 799 GTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGA 878 (1106)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~ 878 (1106)
. . . . .. + .+ .+.++|+++.++. .+++.+|+|+||+
T Consensus 250 ~------------~-------~----~----~~--~-----~~-~l~~~~l~~~~~~----------~~~~~vl~~vsl~ 284 (506)
T PRK13549 250 R------------E-------P----H----TI--G-----EV-ILEVRNLTAWDPV----------NPHIKRVDDVSFS 284 (506)
T ss_pred c------------c-------c----c----CC--C-----Cc-eEEEecCcccccc----------ccccccccceeeE
Confidence 0 0 0 0 00 0 00 2456666654421 0123589999999
Q ss_pred eeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHH
Q 001291 879 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESLF 951 (1106)
Q Consensus 879 i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~---~~~~~~tv~e~l~ 951 (1106)
|++||++||+||||||||||+++|+|..++ +.+|+|.++|.+... ...++.+||++|++ .+++.+|+.||+.
T Consensus 285 i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~ 363 (506)
T PRK13549 285 LRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNIT 363 (506)
T ss_pred EcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhh
Confidence 999999999999999999999999997642 147999999976532 12244689999985 3567899999998
Q ss_pred HhhhhcCC--CCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCH
Q 001291 952 YSAWLRLP--PEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1106)
Q Consensus 952 ~~~~~~~~--~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~ 1028 (1106)
++...... .....+..++.++++++.+++. +..+..+ .+|||||||||+|||||+.+|+||||||||+|||+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~ 438 (506)
T PRK13549 364 LAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDV 438 (506)
T ss_pred hhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCH
Confidence 75321111 0012233445688999999996 4566654 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCc
Q 001291 1029 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHH 1084 (1106)
Q Consensus 1029 ~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~ 1084 (1106)
.+++.++++|++++++|+|||++|||++ ++.+.||++++|++ |+++..|+..+.
T Consensus 439 ~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 492 (506)
T PRK13549 439 GAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHNL 492 (506)
T ss_pred hHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEeccccC
Confidence 9999999999999888999999999997 57788999999985 789998877654
No 19
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-66 Score=635.27 Aligned_cols=503 Identities=22% Similarity=0.249 Sum_probs=361.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCC----------CCC------c-cce
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMD----------EFV------P-ERT 227 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 227 (1106)
.++|+||||++++|++++|+||||||||||+++|+|.++|+ +|+|.++|..+. ... . .+.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 999999986431 111 1 246
Q ss_pred EEEEcCCC--CCCCCCCHHHHHHHHHHhc-CCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHH
Q 001291 228 AAYISQHD--NHIGEMTVRETLAFAARCQ-GVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLK 304 (1106)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1106)
++||+|++ .+++.+||+||+.++.+.. +.. . .+....++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------R------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHH
Confidence 99999987 5788899999999986532 110 0 011234677899
Q ss_pred HcCCcc---cccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEE
Q 001291 305 VLGLDI---CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISL 381 (1106)
Q Consensus 305 ~lgL~~---~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i 381 (1106)
.+||++ ..+..+.+ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+.. +++|+.+
T Consensus 152 ~~gL~~~~~~~~~~~~~-----LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSRYPHQ-----LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhCCCcc-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 45666655 99999999999999999999999999999999999999999999986533 4567778
Q ss_pred ecChhHHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHH
Q 001291 382 LQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEF 461 (1106)
Q Consensus 382 ~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 461 (1106)
+|+..++.++||+|++|++|++++.|+++++.. .|.+....+++.
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~~--------------------------- 270 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALLA--------------------------- 270 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhhh---------------------------
Confidence 999999999999999999999999998876531 000000000000
Q ss_pred HHHHhhchhhhhhhhhhcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 001291 462 VAAFQSFHVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLF 541 (1106)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f 541 (1106)
. .|
T Consensus 271 --~---------------~~------------------------------------------------------------ 273 (623)
T PRK10261 271 --A---------------VP------------------------------------------------------------ 273 (623)
T ss_pred --c---------------cC------------------------------------------------------------
Confidence 0 00
Q ss_pred ccccCCCCcccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHh
Q 001291 542 FRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVF 621 (1106)
Q Consensus 542 ~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~ 621 (1106)
.... .
T Consensus 274 ---~~~~--~---------------------------------------------------------------------- 278 (623)
T PRK10261 274 ---QLGA--M---------------------------------------------------------------------- 278 (623)
T ss_pred ---cccc--c----------------------------------------------------------------------
Confidence 0000 0
Q ss_pred hhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhh
Q 001291 622 LSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWS 701 (1106)
Q Consensus 622 i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~i 701 (1106)
T Consensus 279 -------------------------------------------------------------------------------- 278 (623)
T PRK10261 279 -------------------------------------------------------------------------------- 278 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHhhcCCCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCc
Q 001291 702 SPVMYAQNGILANEFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPR 781 (1106)
Q Consensus 702 sP~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~ 781 (1106)
.+.......+. . .
T Consensus 279 ---------------~~~~~~~~~~~----~----------------------------------------------~-- 291 (623)
T PRK10261 279 ---------------KGLDYPRRFPL----I----------------------------------------------S-- 291 (623)
T ss_pred ---------------ccccCCccccc----c----------------------------------------------c--
Confidence 00000000000 0 0
Q ss_pred cccccccccccccccccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhh
Q 001291 782 AVITEEFESDEQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKL 861 (1106)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~ 861 (1106)
. .... . . ... . . ......+ .+ .+.++|+++.++..... .
T Consensus 292 --------~-~~~~-~-~------------~~~-----~---~---~~~~~~~-----~~-~L~~~~l~~~y~~~~~~-~ 330 (623)
T PRK10261 292 --------L-EHPA-K-Q------------EPP-----I---E---QDTVVDG-----EP-ILQVRNLVTRFPLRSGL-L 330 (623)
T ss_pred --------c-cccc-c-c------------Ccc-----c---c---cccccCC-----Cc-eEEEeeeEEEEcCCCcc-c
Confidence 0 0000 0 0 000 0 0 0000000 11 37788888776421000 0
Q ss_pred cccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh------hcccceEEEEc
Q 001291 862 QGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ------ETFARISGYCE 935 (1106)
Q Consensus 862 ~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~g~v~ 935 (1106)
.. ..+...+|+||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++.. ..+++.++|++
T Consensus 331 ~~-~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~ 407 (623)
T PRK10261 331 NR-VTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRIDTLSPGKLQALRRDIQFIF 407 (623)
T ss_pred cc-cCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEECCcCCHHHHHHhcCCeEEEe
Confidence 00 00124699999999999999999999999999999999998653 47999999986532 12345799999
Q ss_pred cCC--CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 001291 936 QND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVA 1012 (1106)
Q Consensus 936 q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~ 1012 (1106)
|++ .+.+.+||.|++.+....+. ....+..++.+.++++.++|. +..+..+ .+|||||||||+|||||+.
T Consensus 408 Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~-----~~LSgGqrQRv~iAraL~~ 480 (623)
T PRK10261 408 QDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYP-----HEFSGGQRQRICIARALAL 480 (623)
T ss_pred cCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHHHHHHHHHHHHHhc
Confidence 997 47788999999987643321 112334456788999999996 4556553 4699999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCc----h-h
Q 001291 1013 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHH----S-C 1086 (1106)
Q Consensus 1013 ~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~----~-~ 1086 (1106)
+|+||||||||+|||+.++..|+++|++++++ |.|||++|||++ .+...||++++|++ |++++.|+..+. . .
T Consensus 481 ~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~~i~~~p~~~ 558 (623)
T PRK10261 481 NPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRRAVFENPQHP 558 (623)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHHHHhcCCCCH
Confidence 99999999999999999999999999999765 899999999997 47788999999985 799999875531 1 1
Q ss_pred HHHHHHHhCCC
Q 001291 1087 HLISYFEVCPD 1097 (1106)
Q Consensus 1087 ~~~~yf~~~~g 1097 (1106)
....+++++|+
T Consensus 559 ~~~~l~~~~~~ 569 (623)
T PRK10261 559 YTRKLMAAVPV 569 (623)
T ss_pred HHHHHHhhCCC
Confidence 23456777775
No 20
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8.6e-66 Score=621.59 Aligned_cols=451 Identities=21% Similarity=0.327 Sum_probs=346.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999998 9999999988753221 3569999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.|+...... +. ... ..+....++++++.+||++..|..+++
T Consensus 94 ~tv~e~l~~~~~~~~~---~~---~~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 141 (501)
T PRK10762 94 LTIAENIFLGREFVNR---FG---RID------------------------WKKMYAEADKLLARLNLRFSSDKLVGE-- 141 (501)
T ss_pred CcHHHHhhhccccccc---cC---ccC------------------------HHHHHHHHHHHHHHcCCCCCccCchhh--
Confidence 9999999986432100 00 000 001123467789999999888888876
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.. . +++|+.++|+.+++..+||+|++|++
T Consensus 142 ---LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 142 ---LSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998754 3 45677788999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcC
Q 001291 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1106)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1106)
|+++..|+.+++.. ++..+.
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~---------------- 236 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEM---------------- 236 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHH----------------
Confidence 99998775432200 000000
Q ss_pred CccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHH
Q 001291 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1106)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1106)
++ .
T Consensus 237 ------------------------------------------------------------~~--~--------------- 239 (501)
T PRK10762 237 ------------------------------------------------------------MV--G--------------- 239 (501)
T ss_pred ------------------------------------------------------------hc--C---------------
Confidence 00 0
Q ss_pred HHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHH
Q 001291 561 LFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQY 640 (1106)
Q Consensus 561 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~ 640 (1106)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK10762 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCC
Q 001291 641 LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS 720 (1106)
Q Consensus 641 l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~ 720 (1106)
..
T Consensus 240 ------------------------------------------------------------------------------~~ 241 (501)
T PRK10762 240 ------------------------------------------------------------------------------RK 241 (501)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred cccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCc
Q 001291 721 WKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGT 800 (1106)
Q Consensus 721 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1106)
... .. + .
T Consensus 242 ~~~----------------------------------------------------~~--~------------------~- 248 (501)
T PRK10762 242 LED----------------------------------------------------QY--P------------------R- 248 (501)
T ss_pred ccc----------------------------------------------------cc--c------------------c-
Confidence 000 00 0 0
Q ss_pred ccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeee
Q 001291 801 VQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFR 880 (1106)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~ 880 (1106)
. .. +. .+..+.++|++. .+|+|+||+|+
T Consensus 249 -------------------~---~~----~~--------~~~~l~~~~l~~------------------~~l~~vsl~i~ 276 (501)
T PRK10762 249 -------------------L---DK----AP--------GEVRLKVDNLSG------------------PGVNDVSFTLR 276 (501)
T ss_pred -------------------c---cc----CC--------CCcEEEEeCccc------------------CCcccceEEEc
Confidence 0 00 00 001245555541 26999999999
Q ss_pred CCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHh
Q 001291 881 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESLFYS 953 (1106)
Q Consensus 881 ~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~---~~~~~~tv~e~l~~~ 953 (1106)
+||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++ .+++.+|+.||+.+.
T Consensus 277 ~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~ 354 (501)
T PRK10762 277 KGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLT 354 (501)
T ss_pred CCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhh
Confidence 9999999999999999999999998653 47999999976532 12345699999996 466789999999875
Q ss_pred hhhcCC---CCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHH
Q 001291 954 AWLRLP---PEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1106)
Q Consensus 954 ~~~~~~---~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~ 1029 (1106)
...... .....+..++.++++++.+++. +..++.+ .+|||||||||+|||||+.+|+||||||||+|||+.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~ 429 (501)
T PRK10762 355 ALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVG 429 (501)
T ss_pred hhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHh
Confidence 321110 0012223345688999999995 5666654 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCc
Q 001291 1030 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHH 1084 (1106)
Q Consensus 1030 ~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~ 1084 (1106)
++..+++.|++++++|+|||++|||++ .+.+.||++++|++ |++++.|+....
T Consensus 430 ~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~~ 482 (501)
T PRK10762 430 AKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQA 482 (501)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEeccccC
Confidence 999999999999878999999999997 57889999999985 789999987754
No 21
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=7.2e-66 Score=683.32 Aligned_cols=213 Identities=24% Similarity=0.282 Sum_probs=178.4
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..+.|+||+++|+. +..++|+||||+|+|||++||+|+||||||||+++|.|...+ .+|.|.|||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p--~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEV--CGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEE
Confidence 36999999998852 223599999999999999999999999999999999998763 58999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~~~ 991 (1106)
++. ..+++.+|||||++.++. -|++|||... .+..++.++++++.+++.+.. |..++..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~-gTIreNIdp~----------~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFD-GTVRQNVDPF----------LEASSAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCcccc-ccHHHHhCcc----------cCCCHHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 456788999999998876 5999999431 112245688999999987653 3334443
Q ss_pred CCCCCCHHHHHHHHHHHHHhcC-CCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 992 GVNGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~-p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
| .+||||||||++|||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|+
T Consensus 1443 G-~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 G-SNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred c-CcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 3 46999999999999999996 89999999999999999999999999875 4799999999986 467899999998
Q ss_pred cCCEEEEEecCCC
Q 001291 1071 RGGREVYVGPLGH 1083 (1106)
Q Consensus 1071 ~gG~~~~~G~~~~ 1083 (1106)
+ |++++.|+..+
T Consensus 1519 ~-G~VvE~Gt~~e 1530 (1560)
T PTZ00243 1519 H-GAVAEMGSPRE 1530 (1560)
T ss_pred C-CEEEEECCHHH
Confidence 5 79999998643
No 22
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.6e-65 Score=680.08 Aligned_cols=211 Identities=19% Similarity=0.248 Sum_probs=177.5
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..+.|+||+++|+. +..++|+||||+|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 36999999998853 12469999999999999999999999999999999999764 37999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~~~ 991 (1106)
+.. ..+++.++||||++.+++ -|++|||... .+..++.++++++.+++.+.. |..++.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~-GTIR~NLdp~----------~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFS-GTFRKNLDPY----------EQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCc-cCHHHHhCcc----------cCCCHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 754 456788999999999886 5999999421 112345688999999987543 333443
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
+..+||||||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+|+|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 334699999999999999999999999999999999999999999999875 4799999999986 4567999999985
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|++++.|++.
T Consensus 1427 -G~ivE~g~p~ 1436 (1490)
T TIGR01271 1427 -SSVKQYDSIQ 1436 (1490)
T ss_pred -CEEEEeCCHH
Confidence 7999999864
No 23
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-65 Score=622.40 Aligned_cols=458 Identities=22% Similarity=0.307 Sum_probs=347.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 35999999999999999999999999999999999999997 9999999998765432 2469999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++..... ..+.. ... ...+....++.+++.+||.+..|+.+++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~-~~~------------------------~~~~~~~~~~~~l~~~gl~~~~~~~~~~-- 145 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV-NII------------------------DWREMRVRAAMMLLRVGLKVDLDEKVAN-- 145 (510)
T ss_pred CcHHHHhhhcccccc--ccccc-ccc------------------------CHHHHHHHHHHHHHHcCCCCCcccchhh--
Confidence 999999987532100 00000 000 0011223467789999999888888876
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.++||+|++|++
T Consensus 146 ---LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 146 ---LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999864 3 45667788999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcC
Q 001291 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1106)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1106)
|++++.|+++++.. .+..+.
T Consensus 221 G~i~~~g~~~~~~~--------------------------------------------~~~~~~---------------- 240 (510)
T PRK09700 221 GSSVCSGMVSDVSN--------------------------------------------DDIVRL---------------- 240 (510)
T ss_pred CEEeeecchhhCCH--------------------------------------------HHHHHH----------------
Confidence 99999887654310 000000
Q ss_pred CccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHH
Q 001291 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1106)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1106)
++ . .. .
T Consensus 241 ------------------------------------------------------------~~--~--~~-~--------- 246 (510)
T PRK09700 241 ------------------------------------------------------------MV--G--RE-L--------- 246 (510)
T ss_pred ------------------------------------------------------------hc--C--CC-c---------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHH
Q 001291 561 LFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQY 640 (1106)
Q Consensus 561 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~ 640 (1106)
.
T Consensus 247 ---------------------------------------------------------------------~---------- 247 (510)
T PRK09700 247 ---------------------------------------------------------------------Q---------- 247 (510)
T ss_pred ---------------------------------------------------------------------c----------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCC
Q 001291 641 LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS 720 (1106)
Q Consensus 641 l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~ 720 (1106)
..+
T Consensus 248 -------------------------------------------------------------------------~~~---- 250 (510)
T PRK09700 248 -------------------------------------------------------------------------NRF---- 250 (510)
T ss_pred -------------------------------------------------------------------------ccc----
Confidence 000
Q ss_pred cccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCc
Q 001291 721 WKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGT 800 (1106)
Q Consensus 721 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1106)
.. . . .
T Consensus 251 -~~------------------~----------------------------------~---------------------~- 255 (510)
T PRK09700 251 -NA------------------M----------------------------------K---------------------E- 255 (510)
T ss_pred -cc------------------c----------------------------------c---------------------c-
Confidence 00 0 0 0
Q ss_pred ccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeee
Q 001291 801 VQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFR 880 (1106)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~ 880 (1106)
.. . . .. .+..+.++|+++.+ + .+|+|+||+|+
T Consensus 256 -----------~~------~---~-----~~--------~~~~l~~~~l~~~~-------------~--~~l~~isl~i~ 287 (510)
T PRK09700 256 -----------NV------S---N-----LA--------HETVFEVRNVTSRD-------------R--KKVRDISFSVC 287 (510)
T ss_pred -----------cc------c---c-----CC--------CCcEEEEeCccccC-------------C--CcccceeEEEc
Confidence 00 0 0 00 00125666665421 1 27999999999
Q ss_pred CCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHHHHh
Q 001291 881 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESLFYS 953 (1106)
Q Consensus 881 ~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~---~~~~~~tv~e~l~~~ 953 (1106)
+|++++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++ .+++.+||.||+.+.
T Consensus 288 ~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~ 365 (510)
T PRK09700 288 RGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAIS 365 (510)
T ss_pred CCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccc
Confidence 9999999999999999999999998653 47999999976532 12345689999983 467789999999875
Q ss_pred hhhc---CCC--C-CChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001291 954 AWLR---LPP--E-VNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1106)
Q Consensus 954 ~~~~---~~~--~-~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgL 1026 (1106)
...+ ... . ...+..+..++++++.+++. +..+..+ .+|||||||||+|||||+.+|+||||||||+||
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~L 440 (510)
T PRK09700 366 RSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGI 440 (510)
T ss_pred cccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCc
Confidence 3211 000 0 11222334578999999996 6666654 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1027 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1027 D~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
|+.++..++++|++++++|.|||++|||++ .+.+.||++++|++ |++++.++.
T Consensus 441 D~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 441 DVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 999999999999999878999999999987 57789999999985 688888865
No 24
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=4e-65 Score=619.78 Aligned_cols=464 Identities=22% Similarity=0.291 Sum_probs=346.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEECCccCCCCCc-------cceEEEEcCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEFVP-------ERTAAYISQHD 235 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1106)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 469999999999999999999999999999999999998610 128999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHHHHHhc-CCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc--
Q 001291 236 N--HIGEMTVRETLAFAARCQ-GVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI-- 310 (1106)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 310 (1106)
. +++.+||+|++.+..... +. . ..+....++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGM----------R------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCC----------C------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 4 567789999988754321 10 0 0011234678899999975
Q ss_pred -cccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHH
Q 001291 311 -CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETY 389 (1106)
Q Consensus 311 -~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 389 (1106)
..|+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+.+|++++|+..++.
T Consensus 148 ~~~~~~~~~-----LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYPHQ-----LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhCCcc-----cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCCeEEEEcCcHHHHH
Confidence 35777765 9999999999999999999999999999999999999999999997653 3456667889999999
Q ss_pred hhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhch
Q 001291 390 NLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFH 469 (1106)
Q Consensus 390 ~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1106)
.+||+|++|++|++++.|+++++... |.. +
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~-------------------------~----------------- 251 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH-------------------------P----------------- 251 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC-------------------------H-----------------
Confidence 99999999999999999887655210 000 0
Q ss_pred hhhhhhhhhcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCC
Q 001291 470 VGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKD 549 (1106)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~ 549 (1106)
+ . +.+ +...
T Consensus 252 ---------------------------~-------~-----~~~----------------------------~~~~---- 260 (529)
T PRK15134 252 ---------------------------Y-------T-----QKL----------------------------LNSE---- 260 (529)
T ss_pred ---------------------------H-------H-----HHH----------------------------HHhC----
Confidence 0 0 000 0000
Q ss_pred cccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccc
Q 001291 550 SVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGY 629 (1106)
Q Consensus 550 ~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~ 629 (1106)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHH
Q 001291 630 DPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQN 709 (1106)
Q Consensus 630 ~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~ 709 (1106)
|
T Consensus 261 -------------------------------------------------------------------------~------ 261 (529)
T PRK15134 261 -------------------------------------------------------------------------P------ 261 (529)
T ss_pred -------------------------------------------------------------------------c------
Confidence 0
Q ss_pred HHHHHhhcCCCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccc
Q 001291 710 GILANEFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFE 789 (1106)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~ 789 (1106)
.. .+
T Consensus 262 -----------------~~----------------------------------------------~~------------- 265 (529)
T PRK15134 262 -----------------SG----------------------------------------------DP------------- 265 (529)
T ss_pred -----------------cc----------------------------------------------cc-------------
Confidence 00 00
Q ss_pred cccccccccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccch-hhhcccCCCc
Q 001291 790 SDEQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQ-MKLQGVPEDK 868 (1106)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~-~~~~~~~~~~ 868 (1106)
. . . . .. + .+ .+.++|+++.++.+.+ .+ -..+.
T Consensus 266 ---------~------------~-------~----~----~~--~-----~~-~l~~~~l~~~~~~~~~~~~---~~~~~ 298 (529)
T PRK15134 266 ---------V------------P-------L----P----EP--A-----SP-LLDVEQLQVAFPIRKGILK---RTVDH 298 (529)
T ss_pred ---------c------------c-------c----C----CC--C-----CC-cccccCcEEEeecCccccc---ccccc
Confidence 0 0 0 0 00 0 00 2455666655531100 00 00012
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh------cccceEEEEccCC--CC
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE------TFARISGYCEQND--IH 940 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~g~v~q~~--~~ 940 (1106)
+.+|+||||+|++||++||+||||||||||+++|+|..+ .+|+|.++|.+.... .+++.+||++|++ .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999763 379999999765321 1245689999997 36
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001291 941 SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1106)
Q Consensus 941 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illL 1019 (1106)
++.+||.||+.++...+.. .......++.+.++++.+++. +..+..+ .+|||||||||+|||||+.+|++|||
T Consensus 376 ~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llll 449 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYP-----AEFSGGQRQRIAIARALILKPSLIIL 449 (529)
T ss_pred CCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCC-----ccCCHHHHHHHHHHHHHhCCCCEEEe
Confidence 6779999999886433211 122333455688999999997 4556553 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1020 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
||||+|||+.++..+++.|++++++ |+|||++|||++ .+.+.||++++|++ |++++.|+..
T Consensus 450 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 511 (529)
T PRK15134 450 DEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDCE 511 (529)
T ss_pred eCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCHH
Confidence 9999999999999999999999865 899999999997 47788999999985 6899888753
No 25
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.8e-65 Score=614.72 Aligned_cols=454 Identities=20% Similarity=0.272 Sum_probs=344.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999998 9999999988754332 2469999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.|+.... . +....++.+++.+||++..++.+++
T Consensus 101 ~tv~e~l~~~~~~~--------------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (510)
T PRK15439 101 LSVKENILFGLPKR--------------Q------------------------ASMQKMKQLLAALGCQLDLDSSAGS-- 140 (510)
T ss_pred CcHHHHhhcccccc--------------h------------------------HHHHHHHHHHHHcCCCccccCChhh--
Confidence 99999998853100 0 0112356789999999888888876
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||++|+.+|++|||||||+|||+.++.++.+.|+++++ . +++|+.++|+..++.++||+|++|++
T Consensus 141 ---LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 141 ---LEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 3 45677788999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcC
Q 001291 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1106)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1106)
|++++.|+++++... +..+.+
T Consensus 216 G~i~~~g~~~~~~~~--------------------------------------------~~~~~~--------------- 236 (510)
T PRK15439 216 GTIALSGKTADLSTD--------------------------------------------DIIQAI--------------- 236 (510)
T ss_pred CEEEEecChHHcCHH--------------------------------------------HHHHHH---------------
Confidence 999999887654210 000000
Q ss_pred CccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHH
Q 001291 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1106)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1106)
........ ..
T Consensus 237 -------------------------------------------------------------~~~~~~~~-~~-------- 246 (510)
T PRK15439 237 -------------------------------------------------------------TPAAREKS-LS-------- 246 (510)
T ss_pred -------------------------------------------------------------hCcccccc-cc--------
Confidence 00000000 00
Q ss_pred HHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHH
Q 001291 561 LFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQY 640 (1106)
Q Consensus 561 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~ 640 (1106)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK15439 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCC
Q 001291 641 LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS 720 (1106)
Q Consensus 641 l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~ 720 (1106)
. .. .
T Consensus 247 -----------------------------------------------~--~~---------------------------~ 250 (510)
T PRK15439 247 -----------------------------------------------A--SQ---------------------------K 250 (510)
T ss_pred -----------------------------------------------c--cc---------------------------c
Confidence 0 00 0
Q ss_pred cccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCc
Q 001291 721 WKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGT 800 (1106)
Q Consensus 721 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1106)
.. .. +.
T Consensus 251 ~~-----------------~~-----------------------------------~~---------------------- 256 (510)
T PRK15439 251 LW-----------------LE-----------------------------------LP---------------------- 256 (510)
T ss_pred cc-----------------cc-----------------------------------cc----------------------
Confidence 00 00 00
Q ss_pred ccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeee
Q 001291 801 VQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFR 880 (1106)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~ 880 (1106)
.. . . .. + .+ +..+.++|++. .+|+||||+|+
T Consensus 257 -----------~~------~----~-~~-~--~~------~~~l~~~~l~~------------------~~l~~isl~i~ 287 (510)
T PRK15439 257 -----------GN------R----R-QQ-A--AG------APVLTVEDLTG------------------EGFRNISLEVR 287 (510)
T ss_pred -----------cc------c----c-cc-C--CC------CceEEEeCCCC------------------CCccceeEEEc
Confidence 00 0 0 00 0 00 01255566541 15899999999
Q ss_pred CCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh----cccceEEEEccCC---CCCCCCCHHHHHHHh
Q 001291 881 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESLFYS 953 (1106)
Q Consensus 881 ~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~g~v~q~~---~~~~~~tv~e~l~~~ 953 (1106)
+|+++||+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++ .+++.+|+.|++...
T Consensus 288 ~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~ 365 (510)
T PRK15439 288 AGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCAL 365 (510)
T ss_pred CCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhh
Confidence 9999999999999999999999997653 479999999765321 1234689999984 366778999998542
Q ss_pred hhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHH
Q 001291 954 AWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1032 (1106)
Q Consensus 954 ~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~ 1032 (1106)
...+..........++.++++++.+++. +..+..+ .+|||||||||+|||||+.+|+||||||||+|||+.+++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~ 440 (510)
T PRK15439 366 THNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARN 440 (510)
T ss_pred hhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHH
Confidence 1111110011122345678999999996 5666654 469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1033 IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1033 ~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
.+++.|++++++|.|||++|||++ ++.+.||++++|++ |++++.|....
T Consensus 441 ~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 441 DIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred HHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 999999999888999999999997 57788999999984 79999987765
No 26
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=7.3e-65 Score=616.69 Aligned_cols=445 Identities=23% Similarity=0.319 Sum_probs=342.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEECC-----------------------ccC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKL--DPSLKVSGRVTYNG-----------------------HNM 219 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G-----------------------~~~ 219 (1106)
+++|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999996 577 89999973 211
Q ss_pred C-------CC------CccceEEEEcCC-CCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHH
Q 001291 220 D-------EF------VPERTAAYISQH-DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFM 285 (1106)
Q Consensus 220 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~ 285 (1106)
. .. ..++.++||+|+ +.+++.+||+||+.|+....+.. .
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------~----------------- 142 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE----------G----------------- 142 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------H-----------------
Confidence 0 00 013569999997 67888899999999875432210 0
Q ss_pred HhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHH
Q 001291 286 KAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNC 365 (1106)
Q Consensus 286 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~ 365 (1106)
.+....++.+++.+||++..+..+++ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.
T Consensus 143 -------~~~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 143 -------KEAVGRAVDLIEMVQLSHRITHIARD-----LSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred -------HHHHHHHHHHHHHcCChhhhhcCccc-----CCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 01123467789999999888877765 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhh
Q 001291 366 FKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQY 445 (1106)
Q Consensus 366 l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~ 445 (1106)
|+++++.. +++|++++|+...+.++||+|++|++|++++.|+++++.+.+.
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~---------------------------- 261 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM---------------------------- 261 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH----------------------------
Confidence 99986533 4567778899999999999999999999998876554311000
Q ss_pred hhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHH
Q 001291 446 WAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIF 525 (1106)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~ 525 (1106)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHccccCCCCcccchhhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHH
Q 001291 526 KLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSW 605 (1106)
Q Consensus 526 ~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~ 605 (1106)
. ...
T Consensus 262 ----------------~--~~~---------------------------------------------------------- 265 (520)
T TIGR03269 262 ----------------E--GVS---------------------------------------------------------- 265 (520)
T ss_pred ----------------h--hch----------------------------------------------------------
Confidence 0 000
Q ss_pred HHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcc
Q 001291 606 ILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFV 685 (1106)
Q Consensus 606 l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~ 685 (1106)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Q 001291 686 LSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNV 765 (1106)
Q Consensus 686 i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i 765 (1106)
+ .
T Consensus 266 -----------------~------------~------------------------------------------------- 267 (520)
T TIGR03269 266 -----------------E------------V------------------------------------------------- 267 (520)
T ss_pred -----------------h------------h-------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHhccccCCCccccccccccccccccccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceee
Q 001291 766 GFALALTFLNQFEKPRAVITEEFESDEQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLT 845 (1106)
Q Consensus 766 ~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 845 (1106)
.+. . . . . . + ...+.
T Consensus 268 ------------~~~------------------~-------------~------~---~------~--~------~~~l~ 281 (520)
T TIGR03269 268 ------------EKE------------------C-------------E------V---E------V--G------EPIIK 281 (520)
T ss_pred ------------ccc------------------c-------------c------c---C------C--C------CceEE
Confidence 000 0 0 0 0 0 0 00256
Q ss_pred ecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEc-Ccc---
Q 001291 846 FDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRIS-GYP--- 921 (1106)
Q Consensus 846 f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~-g~~--- 921 (1106)
++|+++.++.. ..+++.+|+|+||+|++|+++||+||||||||||+++|+|..++ .+|+|.++ |.+
T Consensus 282 ~~~l~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~~~ 351 (520)
T TIGR03269 282 VRNVSKRYISV--------DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEWVD 351 (520)
T ss_pred EeccEEEeccC--------CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCcccc
Confidence 67777665310 01224699999999999999999999999999999999998653 47999996 532
Q ss_pred CCh------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-----ccccccCC
Q 001291 922 KKQ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-----LRQSLVGL 990 (1106)
Q Consensus 922 ~~~------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-----~~~~~~~~ 990 (1106)
... ...++.+||++|++.+++.+||.||+.+...+. ...+..+..+.++++.+++.+ ..++.
T Consensus 352 ~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~--- 424 (520)
T TIGR03269 352 MTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY--- 424 (520)
T ss_pred ccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC---
Confidence 111 112456899999988888899999998753221 122333456788999999975 34444
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEE
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLM 1069 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l 1069 (1106)
+.+|||||||||+|||||+.+|+||||||||+|||+.++..+++.|++++++ |.|||++|||++ .+.+.||++++|
T Consensus 425 --~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l 501 (520)
T TIGR03269 425 --PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALM 501 (520)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEE
Confidence 3469999999999999999999999999999999999999999999999764 899999999997 477889999999
Q ss_pred ecCCEEEEEecC
Q 001291 1070 KRGGREVYVGPL 1081 (1106)
Q Consensus 1070 ~~gG~~~~~G~~ 1081 (1106)
++ |++++.|+.
T Consensus 502 ~~-G~i~~~g~~ 512 (520)
T TIGR03269 502 RD-GKIVKIGDP 512 (520)
T ss_pred EC-CEEEEECCH
Confidence 85 788888764
No 27
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-64 Score=610.61 Aligned_cols=453 Identities=22% Similarity=0.316 Sum_probs=344.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999997 9999999988753221 3579999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++......+. .. ..+....++.+++.+||++..++.+++
T Consensus 94 ~tv~~~l~~~~~~~~~~~-------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-------VN------------------------RRLLNYEAREQLEHLGVDIDPDTPLKY-- 140 (501)
T ss_pred CCHHHHHHhcccccccCC-------CC------------------------HHHHHHHHHHHHHHcCCCCCcCCchhh--
Confidence 999999998632110000 00 001123466789999998877777765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++..+||+|++|++
T Consensus 141 ---LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 141 ---LSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 3 45677788999999999999999999
Q ss_pred CeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhcC
Q 001291 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQT 480 (1106)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1106)
|+++..++.... .+.++.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~------------------- 233 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQL------------------- 233 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHH-------------------
Confidence 999854421000 000000
Q ss_pred CccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHHH
Q 001291 481 PFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAGA 560 (1106)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g~ 560 (1106)
. . .+. .
T Consensus 234 ------------------------~-----~----------------------------~~~--~--------------- 239 (501)
T PRK11288 234 ------------------------V-----Q----------------------------AMV--G--------------- 239 (501)
T ss_pred ------------------------H-----H----------------------------Hhc--C---------------
Confidence 0 0 000 0
Q ss_pred HHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHHH
Q 001291 561 LFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQY 640 (1106)
Q Consensus 561 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~~ 640 (1106)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK11288 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCCC
Q 001291 641 LLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGHS 720 (1106)
Q Consensus 641 l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~~ 720 (1106)
..
T Consensus 240 ------------------------------------------------------------------------------~~ 241 (501)
T PRK11288 240 ------------------------------------------------------------------------------RE 241 (501)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 00
Q ss_pred cccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccCc
Q 001291 721 WKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGGT 800 (1106)
Q Consensus 721 ~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1106)
.. .. . .
T Consensus 242 ~~------------------~~----------------------------------~---------------------~- 247 (501)
T PRK11288 242 IG------------------DI----------------------------------Y---------------------G- 247 (501)
T ss_pred cc------------------cc----------------------------------c---------------------c-
Confidence 00 00 0 0
Q ss_pred ccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeee
Q 001291 801 VQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFR 880 (1106)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~ 880 (1106)
.. . . . . .+..+.++|+++ ..+++|+||+|+
T Consensus 248 ------------~~-----~----~----~--~------~~~~l~~~~~~~-----------------~~~l~~isl~i~ 277 (501)
T PRK11288 248 ------------YR-----P----R----P--L------GEVRLRLDGLKG-----------------PGLREPISFSVR 277 (501)
T ss_pred ------------cc-----c----c----C--C------CCcEEEEecccc-----------------CCcccceeEEEe
Confidence 00 0 0 0 0 001345556542 138999999999
Q ss_pred CCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCCC---CCCCCCHHHHHHHh
Q 001291 881 PGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQNDI---HSPFVTVYESLFYS 953 (1106)
Q Consensus 881 ~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~~---~~~~~tv~e~l~~~ 953 (1106)
+||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++. +++.+|+.||+.++
T Consensus 278 ~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~ 355 (501)
T PRK11288 278 AGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINIS 355 (501)
T ss_pred CCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccc
Confidence 999999999999999999999999865 358999999976532 122456899999863 67889999999775
Q ss_pred hhhcCCC-C--CChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHH
Q 001291 954 AWLRLPP-E--VNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1106)
Q Consensus 954 ~~~~~~~-~--~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~ 1029 (1106)
....... . ......++.++++++.+++. +..++.+ ..|||||||||+|||||+.+|+||||||||+|||+.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~ 430 (501)
T PRK11288 356 ARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVG 430 (501)
T ss_pred cchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHh
Confidence 3221100 0 01222335678999999994 5666654 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCch
Q 001291 1030 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHS 1085 (1106)
Q Consensus 1030 ~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~ 1085 (1106)
++..++++|++++++|.|||++|||++ ++.+.||++++|++ |++++.|..++..
T Consensus 431 ~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~~ 484 (501)
T PRK11288 431 AKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQAT 484 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccCC
Confidence 999999999999888999999999997 57889999999985 7899999887543
No 28
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.5e-64 Score=609.59 Aligned_cols=458 Identities=19% Similarity=0.273 Sum_probs=344.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEECCccCCCCCc----cceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.++
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLV 90 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccC
Confidence 4699999999999999999999999999999999999886 5 8999999998764332 34699999998889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccc-ccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICA-DTMVG 317 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg 317 (1106)
+.+||+||+.++......+.. . ...+....++.+++.+||.+.. ++.++
T Consensus 91 ~~~tv~~~l~~~~~~~~~~~~------~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (500)
T TIGR02633 91 PELSVAENIFLGNEITLPGGR------M------------------------AYNAMYLRAKNLLRELQLDADNVTRPVG 140 (500)
T ss_pred CCCcHHHHHHhhccccccccc------c------------------------CHHHHHHHHHHHHHHcCCCCCcccCchh
Confidence 999999999986432100000 0 0001123467789999998764 45566
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
+ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.++||+|++
T Consensus 141 ~-----LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~ 213 (500)
T TIGR02633 141 D-----YGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICV 213 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEE
Confidence 5 999999999999999999999999999999999999999999998754 3 55677788999999999999999
Q ss_pred ecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhh
Q 001291 398 LSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDE 477 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (1106)
|++|++++.|+.+++.. ..
T Consensus 214 l~~G~i~~~~~~~~~~~--------------------------------------------~~----------------- 232 (500)
T TIGR02633 214 IRDGQHVATKDMSTMSE--------------------------------------------DD----------------- 232 (500)
T ss_pred EeCCeEeeecCcccCCH--------------------------------------------HH-----------------
Confidence 99999987654321100 00
Q ss_pred hcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhH
Q 001291 478 LQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIY 557 (1106)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~ 557 (1106)
.. . .+. + .
T Consensus 233 -----------------------------------~~-----------------------~-~~~--~--~--------- 240 (500)
T TIGR02633 233 -----------------------------------II-----------------------T-MMV--G--R--------- 240 (500)
T ss_pred -----------------------------------HH-----------------------H-HHh--C--c---------
Confidence 00 0 000 0 0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHH
Q 001291 558 AGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFF 637 (1106)
Q Consensus 558 ~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~ 637 (1106)
+
T Consensus 241 --------------------------~----------------------------------------------------- 241 (500)
T TIGR02633 241 --------------------------E----------------------------------------------------- 241 (500)
T ss_pred --------------------------c-----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhc
Q 001291 638 KQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFL 717 (1106)
Q Consensus 638 ~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~ 717 (1106)
.
T Consensus 242 -----------------------------------------------------~-------------------------- 242 (500)
T TIGR02633 242 -----------------------------------------------------I-------------------------- 242 (500)
T ss_pred -----------------------------------------------------c--------------------------
Confidence 0
Q ss_pred CCCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccc
Q 001291 718 GHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRI 797 (1106)
Q Consensus 718 ~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1106)
.. ...
T Consensus 243 ----~~----------------------------------------------------~~~------------------- 247 (500)
T TIGR02633 243 ----TS----------------------------------------------------LYP------------------- 247 (500)
T ss_pred ----cc----------------------------------------------------ccc-------------------
Confidence 00 000
Q ss_pred cCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeee
Q 001291 798 GGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSG 877 (1106)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~ 877 (1106)
. . . . +. . ...+.++|+++.++. .++..+|+|+||
T Consensus 248 -~------------~-------~----~----~~-~-------~~~l~~~~l~~~~~~----------~~~~~~l~~is~ 281 (500)
T TIGR02633 248 -H------------E-------P----H----EI-G-------DVILEARNLTCWDVI----------NPHRKRVDDVSF 281 (500)
T ss_pred -c------------c-------c----c----CC-C-------CceEEEeCCcccccc----------ccccccccccee
Confidence 0 0 0 0 00 0 002556666544310 012358999999
Q ss_pred eeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCC---CCCCCCCHHHHH
Q 001291 878 AFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESL 950 (1106)
Q Consensus 878 ~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~---~~~~~~tv~e~l 950 (1106)
+|++||++||+||||||||||+++|+|..++ +.+|+|.++|.+... ...++.+||++|++ .+++.+|++||+
T Consensus 282 ~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~ 360 (500)
T TIGR02633 282 SLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNI 360 (500)
T ss_pred EEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHh
Confidence 9999999999999999999999999998652 147999999976532 12345689999996 467889999999
Q ss_pred HHhhhhcCC--CCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCC
Q 001291 951 FYSAWLRLP--PEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1027 (1106)
Q Consensus 951 ~~~~~~~~~--~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD 1027 (1106)
.++..-... ........+..++++++.+++.+ ..+..+ ..||||||||++|||||+.+|++|||||||+|||
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD 435 (500)
T TIGR02633 361 TLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVD 435 (500)
T ss_pred cchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcC
Confidence 875321110 01122334456889999999964 456553 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1028 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1028 ~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
+.++..+++.|++++++|.|||++|||++ ++.+.||++++|++ |+++..++..
T Consensus 436 ~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 436 VGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred HhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999999888999999999997 57789999999985 7888877654
No 29
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-63 Score=600.38 Aligned_cols=453 Identities=18% Similarity=0.275 Sum_probs=343.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999998 9999999998754321 3569999999888899
Q ss_pred CCHHHHHHHHHH-hcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 241 MTVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
+||+||+.++.. ..+.. .. ..+....++.+++.+||++..++.+++
T Consensus 88 ~tv~~~l~~~~~~~~~~~--------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~- 134 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMF--------VD------------------------QDKMYRDTKAIFDELDIDIDPRAKVAT- 134 (491)
T ss_pred CCHHHHhhcccccccccc--------cC------------------------HHHHHHHHHHHHHHcCCCCCccCchhh-
Confidence 999999988532 11100 00 001123467789999999888887765
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|++++. . +.+|+.++|+..++.++||+|++|+
T Consensus 135 ----LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 135 ----LSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999998754 3 4566778899999999999999999
Q ss_pred CCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhc
Q 001291 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQ 479 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1106)
+|+++..|+++++.. ++..+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~---------------- 228 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIA---------------- 228 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHH----------------
Confidence 999998776543200 00000
Q ss_pred CCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHH
Q 001291 480 TPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAG 559 (1106)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g 559 (1106)
.++ + ..
T Consensus 229 ------------------------------------------------------------~~~--~--~~---------- 234 (491)
T PRK10982 229 ------------------------------------------------------------MMV--G--RS---------- 234 (491)
T ss_pred ------------------------------------------------------------HHh--C--CC----------
Confidence 000 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHH
Q 001291 560 ALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQ 639 (1106)
Q Consensus 560 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~ 639 (1106)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 001291 640 YLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGH 719 (1106)
Q Consensus 640 ~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~ 719 (1106)
+
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred CcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccC
Q 001291 720 SWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGG 799 (1106)
Q Consensus 720 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1106)
. ..+ .
T Consensus 236 --~----------------------------------------------------~~~---------------------~ 240 (491)
T PRK10982 236 --T----------------------------------------------------QRF---------------------P 240 (491)
T ss_pred --c----------------------------------------------------ccc---------------------c
Confidence 0 000 0
Q ss_pred cccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeee
Q 001291 800 TVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAF 879 (1106)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i 879 (1106)
.. . . .. .+..+.++|+++.. +.+|+||||+|
T Consensus 241 ------------~~------~----~----~~--------~~~~i~~~~l~~~~---------------~~~l~~vsl~i 271 (491)
T PRK10982 241 ------------DK------E----N----KP--------GEVILEVRNLTSLR---------------QPSIRDVSFDL 271 (491)
T ss_pred ------------cc------c----C----CC--------CCcEEEEeCccccc---------------CcccceeeEEE
Confidence 00 0 0 00 00135667766531 24899999999
Q ss_pred eCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh----cccceEEEEccCCC---CCCCCCHHHHHHH
Q 001291 880 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQNDI---HSPFVTVYESLFY 952 (1106)
Q Consensus 880 ~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~g~v~q~~~---~~~~~tv~e~l~~ 952 (1106)
++||++||+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.+||++|++. +++.+|+.+|..+
T Consensus 272 ~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~ 349 (491)
T PRK10982 272 HKGEILGIAGLVGAKRTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLI 349 (491)
T ss_pred eCCcEEEEecCCCCCHHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheeh
Confidence 99999999999999999999999998763 589999999765321 12445899999853 5677888777433
Q ss_pred hhh--hcCCCC-CChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCH
Q 001291 953 SAW--LRLPPE-VNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1106)
Q Consensus 953 ~~~--~~~~~~-~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~ 1028 (1106)
... ...... ......+..+.++++.+++. +..+..+ .+|||||||||+|||||+.+|+||||||||+|||+
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~ 424 (491)
T PRK10982 350 SNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQI-----GSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDV 424 (491)
T ss_pred hhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCccccc-----ccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccCh
Confidence 211 000001 11223345678899999985 4455553 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCch
Q 001291 1029 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHS 1085 (1106)
Q Consensus 1029 ~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~ 1085 (1106)
.++..++++|+++.++|+|||++|||++ ++.+.||++++|++ |+++..++.+...
T Consensus 425 ~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~~~~ 479 (491)
T PRK10982 425 GAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTKTTT 479 (491)
T ss_pred hHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccccCC
Confidence 9999999999999888999999999997 57789999999985 7888887765443
No 30
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=6.3e-62 Score=587.13 Aligned_cols=446 Identities=19% Similarity=0.255 Sum_probs=329.4
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCC--C--
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNH--I-- 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~--~-- 238 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 5999999999999999999999999999999999999998 9999999977643221 2458999997532 1
Q ss_pred ----CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccc
Q 001291 239 ----GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1106)
Q Consensus 239 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
..+||+|++.+.. +....++.+++.+||++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1457777664310 001235678999999988888
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.+++ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++ . +.+|+.++|+..++.++||+
T Consensus 132 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFKY-----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-S-GITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCeEEEEeCCHHHHHhhCCE
Confidence 8876 999999999999999999999999999999999999999999998764 3 45566688899999999999
Q ss_pred EEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhh
Q 001291 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKL 474 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1106)
|++|++|+++++|+++++... +.+..
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~~~--------------------------------------- 230 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALVAQ--------------------------------------- 230 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhhhh---------------------------------------
Confidence 999999999998886654210 00000
Q ss_pred hhhhcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccch
Q 001291 475 SDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDG 554 (1106)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~ 554 (1106)
. ... + ....
T Consensus 231 ---~------------------------------~~~------~--------------------------~~~~------ 239 (490)
T PRK10938 231 ---L------------------------------AHS------E--------------------------QLEG------ 239 (490)
T ss_pred ---h------------------------------hhh------h--------------------------ccCc------
Confidence 0 000 0 0000
Q ss_pred hhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchh
Q 001291 555 GIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAG 634 (1106)
Q Consensus 555 ~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 634 (1106)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHH
Q 001291 635 RFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILAN 714 (1106)
Q Consensus 635 rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~n 714 (1106)
T Consensus 240 -------------------------------------------------------------------------------- 239 (490)
T PRK10938 240 -------------------------------------------------------------------------------- 239 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccc
Q 001291 715 EFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQD 794 (1106)
Q Consensus 715 ef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~ 794 (1106)
. . .+..
T Consensus 240 ----~--~--~~~~------------------------------------------------------------------ 245 (490)
T PRK10938 240 ----V--Q--LPEP------------------------------------------------------------------ 245 (490)
T ss_pred ----c--c--cCcc------------------------------------------------------------------
Confidence 0 0 0000
Q ss_pred ccccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeee
Q 001291 795 NRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNG 874 (1106)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~ 874 (1106)
. . .. . .. .... ....+.++|+++.++ ++.+|+|
T Consensus 246 --~-~------------~~------~---~~--~~~~--------~~~~l~~~~l~~~~~-------------~~~il~~ 278 (490)
T PRK10938 246 --D-E------------PS------A---RH--ALPA--------NEPRIVLNNGVVSYN-------------DRPILHN 278 (490)
T ss_pred --c-c------------cc------c---cc--ccCC--------CCceEEEeceEEEEC-------------CeeEEee
Confidence 0 0 00 0 00 0000 001367888877653 2469999
Q ss_pred eeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCCCCCC--CCCHHH
Q 001291 875 VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQNDIHSP--FVTVYE 948 (1106)
Q Consensus 875 vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~~~~~--~~tv~e 948 (1106)
+||+|++||++||+||||||||||+++|+|..+. ..+|+|.++|.+... ...++.+||++|++...+ ..++.+
T Consensus 279 vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~ 357 (490)
T PRK10938 279 LSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRN 357 (490)
T ss_pred ceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHH
Confidence 9999999999999999999999999999996431 147999999976421 123456999999875533 246766
Q ss_pred HHHHhhhh--cCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCC
Q 001291 949 SLFYSAWL--RLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1106)
Q Consensus 949 ~l~~~~~~--~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsg 1025 (1106)
++.++... ...... ....++.++++++.+++.+ ..+..+ .+|||||||||+|||||+.+|++|||||||+|
T Consensus 358 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEPt~g 431 (490)
T PRK10938 358 VILSGFFDSIGIYQAV-SDRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEPLQG 431 (490)
T ss_pred HHHhccccccccccCC-CHHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCcccc
Confidence 66443211 000111 1223456889999999986 666653 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCc-eEEEEecCccHHHHH-hcCeEEEEecCCEEEEE
Q 001291 1026 LDARAAAIVMRTVRNTVDTGR-TVVCTIHQPSIDIFE-AFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 1026 LD~~~~~~i~~~l~~~~~~g~-tvi~~tH~~~~~~~~-~~D~v~~l~~gG~~~~~ 1078 (1106)
||+.++..+++.|++++++|. |||++|||++ ++.+ .||++++|++ |++++.
T Consensus 432 LD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 432 LDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred CCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 999999999999999987764 6999999987 4655 5899999986 566654
No 31
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.7e-59 Score=572.32 Aligned_cols=201 Identities=21% Similarity=0.308 Sum_probs=163.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECC-c-
Confidence 478888887653 34699999999999999999999999999999999997653 479999843 2
Q ss_pred ChhcccceEEEEccCC-CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHH
Q 001291 923 KQETFARISGYCEQND-IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~LS~Gq 1000 (1106)
..+||++|++ .+.+.+||.|++.+...... .... ...+.++++.+++.+ ..++.+ .+|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKV-----GVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 56778999999987642221 1111 123457899999964 445553 4699999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEE-EEe
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YVG 1079 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~-~~G 1079 (1106)
|||++|||||+.+|++|||||||+|||+.++..+++.|+++. | |||++|||++ .+...||++++|++||+++ +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 4 8999999997 4778899999998777776 444
Q ss_pred c
Q 001291 1080 P 1080 (1106)
Q Consensus 1080 ~ 1080 (1106)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 32
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=7.8e-60 Score=510.40 Aligned_cols=472 Identities=25% Similarity=0.335 Sum_probs=364.2
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEECCccCCCCCcc-------ceEEEEcC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEFVPE-------RTAAYISQ 233 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 233 (1106)
..+.++++|||.+++||.+||+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|++|+|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 446799999999999999999999999999999999999875 345689999999997544321 36999999
Q ss_pred CC--CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccc
Q 001291 234 HD--NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC 311 (1106)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1106)
++ .+.|-.|+...|.-..+++.. + ...+.+.++-+.|+..|+.+.
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------~------------------------~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------L------------------------SRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------c------------------------cHHHHHHHHHHHHHHcCCCch
Confidence 96 466777888888777665421 1 111234456778999999876
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001291 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1106)
Q Consensus 312 ~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1106)
...+ +.+...|||||||||.||.||+.+|++|+-||||++||-....+|+++|+++... .+..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHh
Confidence 5544 3456679999999999999999999999999999999999999999999998664 466777899999999999
Q ss_pred cCeEEEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhh
Q 001291 392 FDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVG 471 (1106)
Q Consensus 392 ~D~vilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1106)
+|+|+||.+|+++++|+.+.+.. .|.+ |
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------p------------------- 252 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------P------------------- 252 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------h-------------------
Confidence 99999999999999999877632 1111 0
Q ss_pred hhhhhhhcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcc
Q 001291 472 QKLSDELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSV 551 (1106)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~ 551 (1106)
|. |.++ .
T Consensus 253 -------------------------YT------------r~Ll------------------------------~------ 259 (534)
T COG4172 253 -------------------------YT------------RKLL------------------------------A------ 259 (534)
T ss_pred -------------------------HH------------HHHH------------------------------h------
Confidence 00 0000 0
Q ss_pred cchhhHHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccC
Q 001291 552 TDGGIYAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDP 631 (1106)
Q Consensus 552 ~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 631 (1106)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHH
Q 001291 632 NAGRFFKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGI 711 (1106)
Q Consensus 632 ~~~rf~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al 711 (1106)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccc
Q 001291 712 LANEFLGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESD 791 (1106)
Q Consensus 712 ~~nef~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~ 791 (1106)
.|-.+.
T Consensus 260 --aeP~g~------------------------------------------------------------------------ 265 (534)
T COG4172 260 --AEPSGD------------------------------------------------------------------------ 265 (534)
T ss_pred --cCCCCC------------------------------------------------------------------------
Confidence 000000
Q ss_pred cccccccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEE
Q 001291 792 EQDNRIGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVL 871 (1106)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~ 871 (1106)
. . +.+ +-.|..+.-+|+.-.++.+..+-. -..+...+
T Consensus 266 ----------------------------~----~--p~~-------~~~~~ll~~~~v~v~f~i~~g~~~--r~~~~~~A 302 (534)
T COG4172 266 ----------------------------P----P--PLP-------EDAPVLLEVEDLRVWFPIKGGFLR--RTVDHLRA 302 (534)
T ss_pred ----------------------------C----C--CCC-------CCCCceEEecceEEEEecCCcccc--ccchheEE
Confidence 0 0 000 001123344444433333322100 01133569
Q ss_pred eeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh------hcccceEEEEccCCC--CCCC
Q 001291 872 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ------ETFARISGYCEQNDI--HSPF 943 (1106)
Q Consensus 872 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~g~v~q~~~--~~~~ 943 (1106)
+++||+++++||.+||||.||||||||-.+|.+...+ +|.|.++|.++.. ...++.+-.|+|+|. +.|.
T Consensus 303 Vd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPR 379 (534)
T COG4172 303 VDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPR 379 (534)
T ss_pred eccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcc
Confidence 9999999999999999999999999999999997763 5999999988753 235677899999986 5789
Q ss_pred CCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCC
Q 001291 944 VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1023 (1106)
Q Consensus 944 ~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPT 1023 (1106)
+||.+-+.=+.....+ ..+..++++++.++|+.+||++-...+ . +.++|||||||++||||++.+|++++|||||
T Consensus 380 mtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~R--Y--PhEFSGGQRQRIAIARAliLkP~~i~LDEPT 454 (534)
T COG4172 380 MTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNR--Y--PHEFSGGQRQRIAIARALILKPELILLDEPT 454 (534)
T ss_pred cCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhc--C--CcccCcchhhHHHHHHHHhcCCcEEEecCCc
Confidence 9999988777655543 466788899999999999998643222 2 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1024 SGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1024 sgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
|+||..-+++|.++|+++.+ .|.+-++||||+.. +...||++++|++ |++|+.|+..
T Consensus 455 SALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~V-vrAl~~~viVm~~-GkiVE~G~~~ 512 (534)
T COG4172 455 SALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAV-VRALCHRVIVMRD-GKIVEQGPTE 512 (534)
T ss_pred hHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHHhhceEEEEeC-CEEeeeCCHH
Confidence 99999999999999999964 59999999999974 7778999999985 7999999865
No 33
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-60 Score=573.29 Aligned_cols=198 Identities=18% Similarity=0.257 Sum_probs=162.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 478899887763 24699999999999999999999999999999999997653 4799999873
Q ss_pred ChhcccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHH
Q 001291 923 KQETFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~G 999 (1106)
+.+||++|++. +.+.+|+.|++.+.. .. ...+..++++++.+++. +..+..+ .+||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-----~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-----GDDEQAVRGTLGRLLFSQDDIKKSV-----KVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-----CccHHHHHHHHHHcCCChhHhcCcc-----cccCHH
Confidence 35899999864 445689999985421 11 11234578899999984 5556553 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEE-EE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YV 1078 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~-~~ 1078 (1106)
||||++|||||+.+|+||||||||+|||+.+...+++.|+++ +.|||++|||++ .+...||++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999997 47788999999986 5666 76
Q ss_pred ecC
Q 001291 1079 GPL 1081 (1106)
Q Consensus 1079 G~~ 1081 (1106)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 653
No 34
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.1e-58 Score=565.18 Aligned_cols=201 Identities=19% Similarity=0.281 Sum_probs=162.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++|+++||+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECC-c-
Confidence 478888887653 34699999999999999999999999999999999998653 479999843 2
Q ss_pred ChhcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHH
Q 001291 923 KQETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~LS~Gq 1000 (1106)
..+||++|++. +++.+|+.|++.++..... .... +..+.++++.+++.+ ..+..+ .+|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 14899999863 6778999999987642211 1111 123457899999964 445553 4699999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEE-EEe
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YVG 1079 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~-~~G 1079 (1106)
||||+|||||+.+|++|||||||+|||+.++..+++.|+++. .|||++|||++ .+...||++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999997 4778899999998777876 444
Q ss_pred c
Q 001291 1080 P 1080 (1106)
Q Consensus 1080 ~ 1080 (1106)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 35
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=8.6e-58 Score=554.78 Aligned_cols=214 Identities=20% Similarity=0.226 Sum_probs=174.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ + ..|+++||+|++||++||+||||||||||+++|+|..++ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 367788876553 2 248999999999999999999999999999999998653 47999875
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
..+||++|+..+.+.+||+|++.+.... ... ...++++++.+++.+..++.+ .+|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 1489999998877889999999875211 111 124678999999987777664 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
||+|||||+.+|+||||||||+|||+.++..++++|++++++ |+|||++|||++ .+...||++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999987 4778899999996 3 77777775
Q ss_pred CCc---hhHHHHHHHhCCCCc
Q 001291 1082 GHH---SCHLISYFEVCPDAH 1099 (1106)
Q Consensus 1082 ~~~---~~~~~~yf~~~~g~~ 1099 (1106)
... ...+-.|++.+ ||.
T Consensus 538 ~~~~~~~~~~~~~l~~~-~i~ 557 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL-GIT 557 (590)
T ss_pred CCchhHHHHHHHHHHHc-CCE
Confidence 432 12345667766 665
No 36
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-56 Score=549.33 Aligned_cols=198 Identities=21% Similarity=0.345 Sum_probs=159.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++|+++||+||||||||||+++|+|...+ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 478888887763 34699999999999999999999999999999999997653 4799998641
Q ss_pred ChhcccceEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHH
Q 001291 923 KQETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~LS~G 999 (1106)
..+||++|+. .+.+..|+.+++.. . . .......+.++++.+++.. ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~----~~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--A----PQELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--C----chhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 23455677776531 1 1 1122345788999999963 455554 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEE-EE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YV 1078 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~-~~ 1078 (1106)
|||||+||++|+.+|++|||||||+|||+.+...+.++|+++ . .|||+||||+. .+...||++++|++ |+++ +.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999987 47788999999985 6776 77
Q ss_pred ecCC
Q 001291 1079 GPLG 1082 (1106)
Q Consensus 1079 G~~~ 1082 (1106)
|++.
T Consensus 510 g~~~ 513 (638)
T PRK10636 510 GDLE 513 (638)
T ss_pred CCHH
Confidence 7653
No 37
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.7e-55 Score=544.17 Aligned_cols=202 Identities=24% Similarity=0.337 Sum_probs=161.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++|+++||+||||||||||+++|+|..++ ..|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQA--DSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEE-CCCc
Confidence 478888887663 34699999999999999999999999999999999997653 4799988 4321
Q ss_pred ChhcccceEEEEccCC-CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCHHH
Q 001291 923 KQETFARISGYCEQND-IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~-~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~Gq 1000 (1106)
.+||++|+. .+.+.+||.|++.+..... ... .....+.++++.+++. +..++.+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVN--GRPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---ccc--chHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 4678899999997653211 111 1123467889899885 3455553 4699999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEE-EEe
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YVG 1079 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~-~~G 1079 (1106)
||||+||++|+.+|++|||||||+|||+.+...+.++|+++ +.|||+||||++ .+...||++++|+++|++. |.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999987 4778899999997335554 555
Q ss_pred cC
Q 001291 1080 PL 1081 (1106)
Q Consensus 1080 ~~ 1081 (1106)
++
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 54
No 38
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-56 Score=508.26 Aligned_cols=450 Identities=23% Similarity=0.359 Sum_probs=348.7
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCcc----ceEEEEcCCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHI 238 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1106)
..+++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.++|.+.....++ .-|+.|.|+..++
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 3467999999999999999999999999999999999999998 99999999987655543 4589999999999
Q ss_pred CCCCHHHHHHHHHHhcC-CCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 239 GEMTVRETLAFAARCQG-VGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~-~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
|+|||.|||.++..... .+- + ...+....+..+|+.+|+....++.|+
T Consensus 96 p~LsVaeNifLgre~~~~~g~-------i------------------------d~~~m~~~A~~~l~~lg~~~~~~~~v~ 144 (500)
T COG1129 96 PNLSVAENIFLGREPTRRFGL-------I------------------------DRKAMRRRARELLARLGLDIDPDTLVG 144 (500)
T ss_pred CCccHHHHhhcccccccCCCc-------c------------------------CHHHHHHHHHHHHHHcCCCCChhhhhh
Confidence 99999999988754332 110 0 011123456778999999766899998
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
+ ||+||||-|.||||+..+++|++||||||+|+...+..+++.++++. ..+..|+.|+|..+|++++||+|.|
T Consensus 145 ~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritV 217 (500)
T COG1129 145 D-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITV 217 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEE
Confidence 7 99999999999999999999999999999999999999999999985 4577888899999999999999999
Q ss_pred ecCCeEEEEcCH-HHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhh
Q 001291 398 LSDGQIVYQGPR-ELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSD 476 (1106)
Q Consensus 398 L~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1106)
|.+|+++..++. .+.- .++.
T Consensus 218 lRDG~~v~~~~~~~~~~--------------------------------------------~~~l--------------- 238 (500)
T COG1129 218 LRDGRVVGTRPTAAETS--------------------------------------------EDEL--------------- 238 (500)
T ss_pred EeCCEEeeecccccCCC--------------------------------------------HHHH---------------
Confidence 999999876542 2110 0000
Q ss_pred hhcCCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhh
Q 001291 477 ELQTPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGI 556 (1106)
Q Consensus 477 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~ 556 (1106)
.
T Consensus 239 ----------------------------v--------------------------------------------------- 239 (500)
T COG1129 239 ----------------------------V--------------------------------------------------- 239 (500)
T ss_pred ----------------------------H---------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHH
Q 001291 557 YAGALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRF 636 (1106)
Q Consensus 557 ~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf 636 (1106)
-.|+|-.
T Consensus 240 -------------------------------------------------------------------~~MvGr~------ 246 (500)
T COG1129 240 -------------------------------------------------------------------RLMVGRE------ 246 (500)
T ss_pred -------------------------------------------------------------------HHhhCcc------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhh
Q 001291 637 FKQYLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEF 716 (1106)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef 716 (1106)
+
T Consensus 247 -------------------------------------------------------------------------------~ 247 (500)
T COG1129 247 -------------------------------------------------------------------------------L 247 (500)
T ss_pred -------------------------------------------------------------------------------h
Confidence 0
Q ss_pred cCCCcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCcccccccccccccccc
Q 001291 717 LGHSWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNR 796 (1106)
Q Consensus 717 ~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1106)
.. . +.
T Consensus 248 -----~~------------------~----------------------------------~~------------------ 252 (500)
T COG1129 248 -----ED------------------L----------------------------------FP------------------ 252 (500)
T ss_pred -----hh------------------h----------------------------------cc------------------
Confidence 00 0 00
Q ss_pred ccCcccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeee
Q 001291 797 IGGTVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVS 876 (1106)
Q Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs 876 (1106)
. . . .. ...+..+++++++- ...++|+|
T Consensus 253 ---------------------------~-~-~-~~------~~~~~~l~v~~l~~-----------------~~~~~dvS 279 (500)
T COG1129 253 ---------------------------E-P-P-EE------GIGEPVLEVRNLSG-----------------GGKVRDVS 279 (500)
T ss_pred ---------------------------c-c-c-cc------CCCCcEEEEecCCC-----------------CCceeCce
Confidence 0 0 0 00 00011233443321 11578999
Q ss_pred eeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCCC---CCCCCCHHHH
Q 001291 877 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQNDI---HSPFVTVYES 949 (1106)
Q Consensus 877 ~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~~---~~~~~tv~e~ 949 (1106)
|++++||++||.|-=|||+|-|+++|.|... ...|+|.++|.+... ...+..++||+.+.. ++..++|.+|
T Consensus 280 f~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~N 357 (500)
T COG1129 280 FTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAEN 357 (500)
T ss_pred eEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHh
Confidence 9999999999999999999999999999544 347999999997643 234557999998754 5678999999
Q ss_pred HHHhhhhcCC-C-CCChHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001291 950 LFYSAWLRLP-P-EVNSETRKMFIEEVMELVELKPLR-QSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1106)
Q Consensus 950 l~~~~~~~~~-~-~~~~~~~~~~v~~~l~~~~l~~~~-~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgL 1026 (1106)
+.++...+.. . -.+....++.+++..+.++++... +.. +..||||.+|||.|||.|+.+|+||||||||.|+
T Consensus 358 i~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGI 432 (500)
T COG1129 358 ITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGI 432 (500)
T ss_pred eehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCc
Confidence 9887332221 1 244555566788899999986432 222 3469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1027 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1027 D~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|..+++.|.++|++++++|++||++|-++. |+...||||++|++ |+++-.=+
T Consensus 433 DVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~ 484 (500)
T COG1129 433 DVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELD 484 (500)
T ss_pred ccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEec
Confidence 999999999999999999999999999987 79999999999985 78776433
No 39
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=6.4e-54 Score=529.42 Aligned_cols=199 Identities=18% Similarity=0.274 Sum_probs=155.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.|+ ++..+|+|+||+|++|++++|+||||||||||+++|+|..++ ..|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 478899988763 123599999999999999999999999999999999997653 4799988652
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHHHH
Q 001291 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~LS~Gqr 1001 (1106)
..+||++|++. ..+++.++..+......+ .. .+..+.++++.+++.+ ..+..+ ..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~----~~~~i~~~L~~~gl~~~~~~~~~-----~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GV----PEQKLRAHLGSFGVTGNLALQPM-----YTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CC----CHHHHHHHHHHCCCChHHhcCCc-----cccCHHHH
Confidence 35899999752 334555554322111111 11 1245778999999974 445443 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEE-EEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV-YVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~-~~G~ 1080 (1106)
|||+|||+|+.+|++|||||||+|||+.+...+.+.|++. . .|||+||||+. .+...||++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 3 49999999997 47778999999985 6777 6664
No 40
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.4e-52 Score=495.35 Aligned_cols=220 Identities=29% Similarity=0.353 Sum_probs=171.3
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCH
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1106)
.+++|+|+|+.+.+|+.++|+|+|||||||||++|+|...|+ +|+|...+ .-+++|++|+....+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 457999999999999999999999999999999999999998 99998865 2379999999998889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHh----hcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKA----ASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~----~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+.+.-+..- .+++..+. +......++++.....+. ...++-+.+.++..++..||++.. ++.+++
T Consensus 84 ~~~v~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~- 153 (530)
T COG0488 84 LDYVIEGFGE-----LRELLAEL---EEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSS- 153 (530)
T ss_pred HHHHHhhhHH-----HHHHHHHH---HHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhh-
Confidence 9999876531 11111111 111111222211111100 011112344677888999999887 888876
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
||||||.||++|++|+.+|++|+|||||++||..+..++-+.|++. .+ ++|+++|++..+-+.|++|+-++
T Consensus 154 ----LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 154 ----LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred ----cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 9999999999999999999999999999999999999999999852 34 67778999999999999999999
Q ss_pred CCeEE-EEcCHHHHH
Q 001291 400 DGQIV-YQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv-~~G~~~~~~ 413 (1106)
.|++. |.|..+...
T Consensus 225 ~g~l~~y~Gny~~~~ 239 (530)
T COG0488 225 RGKLTPYKGNYSSYL 239 (530)
T ss_pred CCceeEecCCHHHHH
Confidence 99875 777776554
No 41
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=2.8e-51 Score=459.66 Aligned_cols=458 Identities=21% Similarity=0.294 Sum_probs=356.2
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCcc----ceEEEEcCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHIG 239 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1106)
...+++|||++|++||+.||+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ --||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 467999999999999999999999999999999999999999 99999999998765553 35999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
++||.|||..+..-... .+ + ...+...+++.+.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~------~------------------------~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GL------I------------------------DRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-cc------c------------------------CHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999988642110 00 0 1112334678889999999999999998
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
||=||||||.|-++|+.+|++|+|||||+-|-|....++++.+++++. .+.+|+.|+|-..|+.++||++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999864 45667778999999999999999999
Q ss_pred CCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCcccCHHHHHHHHhhchhhhhhhhhhc
Q 001291 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSKKDQEQYWAHKDRPYRFVKVQEFVAAFQSFHVGQKLSDELQ 479 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1106)
.|+++-.-++ . . + .+.+++++
T Consensus 215 ~Gkvvgt~~~--~------------~--------------------------~---~t~~ela~---------------- 235 (501)
T COG3845 215 RGKVVGTVDP--V------------A--------------------------E---TTEEELAE---------------- 235 (501)
T ss_pred CCeEEeeecC--C------------C--------------------------C---CCHHHHHH----------------
Confidence 9998743210 0 0 0 00000000
Q ss_pred CCccccccccccccCCcccccHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHccccCCCCcccchhhHHH
Q 001291 480 TPFDKSKSHRAALTTKVYGVGKRELLKACTSRELLLMKRNSFVYIFKLIQIGSITLVYMTLFFRTKMHKDSVTDGGIYAG 559 (1106)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~~l~~~R~~~~~~~~~~~~~~~~li~g~~f~~~~~~~~~~~~~~~~~g 559 (1106)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhchhhHHhhhcCCcChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhccccCchhHHHHH
Q 001291 560 ALFFTIVMPLFSGFAEISMTIVKLPVFYKQRDFKFFPPWAYAIPSWILKIPISFLEPAVWVFLSYYVIGYDPNAGRFFKQ 639 (1106)
Q Consensus 560 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf~~~ 639 (1106)
+ |+|-..
T Consensus 236 --------l---------------------------------------------------------MvG~~v-------- 242 (501)
T COG3845 236 --------L---------------------------------------------------------MVGREV-------- 242 (501)
T ss_pred --------H---------------------------------------------------------hcCCcc--------
Confidence 0 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCccchhhHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 001291 640 YLLLLAFNQMISGLFRFLGAIGRNLVVAYTFGSFAVLVLLALGGFVLSREEVKKWWKWAYWSSPVMYAQNGILANEFLGH 719 (1106)
Q Consensus 640 ~l~~~~~~~~~~~l~~~i~~i~~~~~ia~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isP~~y~~~al~~nef~~~ 719 (1106)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T COG3845 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccCCCccchHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccccccccccccccccC
Q 001291 720 SWKKFTPTSTESLGVQVLESREFFAHAYWYWLGLGALFGFILLLNVGFALALTFLNQFEKPRAVITEEFESDEQDNRIGG 799 (1106)
Q Consensus 720 ~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~w~~~~~l~~~~~~f~i~~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1106)
.. .
T Consensus 243 --~~---------------------------------------------------------------------------~ 245 (501)
T COG3845 243 --VL---------------------------------------------------------------------------R 245 (501)
T ss_pred --cc---------------------------------------------------------------------------c
Confidence 00 0
Q ss_pred cccccCCCCCCCCCcccCCCCcccccccCCCccCCCcCCCCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeee
Q 001291 800 TVQLSNCGESGNDNRERNSSSSLTEAEASHPKKRGMVLPFEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAF 879 (1106)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i 879 (1106)
.. ..+...| +..+.++|++-.-+ .+...+++|||+|
T Consensus 246 ------------~~--------------~~~~~pg------~~vL~V~~L~v~~~------------~~~~~v~~vs~~V 281 (501)
T COG3845 246 ------------VV--------------KPPSTPG------EVVLEVEDLSVKDR------------RGVTAVKDVSFEV 281 (501)
T ss_pred ------------cc--------------cCCCCCC------CeEEEEeeeEeecC------------CCCceeeeeeeEE
Confidence 00 0000000 12456666653221 1246899999999
Q ss_pred eCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC-C---hh-cccceEEEEccCCC---CCCCCCHHHHHH
Q 001291 880 RPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK-K---QE-TFARISGYCEQNDI---HSPFVTVYESLF 951 (1106)
Q Consensus 880 ~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~-~---~~-~~~~~~g~v~q~~~---~~~~~tv~e~l~ 951 (1106)
++||++||.|..|-|-+.|+.+|+|..+. ..|.|.++|.+. . .. ..+..+||||.+.. +.+.+|+.||+.
T Consensus 282 r~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~v 359 (501)
T COG3845 282 RAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLV 359 (501)
T ss_pred ecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhh
Confidence 99999999999999999999999997653 359999999985 2 12 22346899999874 467899999998
Q ss_pred Hhhhhc----CCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCC
Q 001291 952 YSAWLR----LPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1027 (1106)
Q Consensus 952 ~~~~~~----~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD 1027 (1106)
+...-+ ...-.+....+.+..++++.++.....-.. ....||||++||+-+||+|.++|++|++.+||.|||
T Consensus 360 L~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLD 435 (501)
T COG3845 360 LGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTRGLD 435 (501)
T ss_pred hhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCcccc
Confidence 765321 111345566778889999999987322111 134699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1028 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1028 ~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
..+.+.|.+.|.+.++.|++|+++|-|++ ++++.||||.+|.+ |+++...+..+
T Consensus 436 vgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 436 VGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 99999999999999999999999999998 79999999999985 79988887764
No 42
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-46 Score=377.95 Aligned_cols=215 Identities=25% Similarity=0.356 Sum_probs=189.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++.+| ++..+|+|||++|++||+++|+|||||||||||+||.|+..+ .+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~--~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEP--DSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCC--CCceEEECCEecc
Confidence 5667776554 467899999999999999999999999999999999998763 5899999996542
Q ss_pred ----hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 ----QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ----~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
-...|+.+|+|+|+..++|.+||.||+.++...- ...++++.++.+.+.|+.+||.+.++... .+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcH
Confidence 2346778999999999999999999999875432 24567778888999999999999988874 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|||||+|||||+.+|+++++|||||+|||+....+.+++++++++|.|+||+||++.+ ..+.+|||++|+ +|+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999986 678899999998 57999999
Q ss_pred cCC
Q 001291 1080 PLG 1082 (1106)
Q Consensus 1080 ~~~ 1082 (1106)
++.
T Consensus 219 ~p~ 221 (240)
T COG1126 219 PPE 221 (240)
T ss_pred CHH
Confidence 765
No 43
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-45 Score=371.28 Aligned_cols=220 Identities=27% Similarity=0.417 Sum_probs=190.9
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC----CccceEEEEcCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF----VPERTAAYISQHDNHIG 239 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 239 (1106)
...+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..++.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 467999999999999999999999999999999999999998 99999999765321 23578999999999999
Q ss_pred CCCHHHHHHHHHHh-cCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 240 EMTVRETLAFAARC-QGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
++||.||+..+... ++. ..++.+..+..+|+.+||.+.+|.+...
T Consensus 91 HlTvleNv~lap~~v~~~----------------------------------~k~eA~~~A~~lL~~VGL~~ka~~yP~q 136 (240)
T COG1126 91 HLTVLENVTLAPVKVKKL----------------------------------SKAEAREKALELLEKVGLADKADAYPAQ 136 (240)
T ss_pred cchHHHHHHhhhHHHcCC----------------------------------CHHHHHHHHHHHHHHcCchhhhhhCccc
Confidence 99999999987532 111 1223445677889999999999988765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++ .+.++++++|....+-+.+|||+.|
T Consensus 137 -----LSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~--eGmTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 137 -----LSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE--EGMTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred -----cCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH--cCCeEEEEechhHHHHHhhheEEEe
Confidence 999999999999999999999999999999999999999999999986 3466666899999999999999999
Q ss_pred cCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHh
Q 001291 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQE 435 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 435 (1106)
++|+++.+|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999987 456766666777754
No 44
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.7e-45 Score=441.34 Aligned_cols=243 Identities=44% Similarity=0.783 Sum_probs=225.7
Q ss_pred CCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc-eeEEEEEEc
Q 001291 840 EPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRIS 918 (1106)
Q Consensus 840 ~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~ 918 (1106)
.+..+.|+|+++..+.+.. ..+++|+|||+.++|||++|||||+||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3457899999988775431 3468999999999999999999999999999999999988764 689999999
Q ss_pred CccCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 919 GYPKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 919 g~~~~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
|++.....+++.+|||.|+|.+.+.+||+|.+.|++.+|++.....++++++|+++++.++|.+++|.++|.++.+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98887778889999999999999999999999999999999888889999999999999999999999999888889999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||||||+||.+|+.||+||||||||||||..++..++++|++++++|+||||++|||+.++++.||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 599999
Q ss_pred ecCCCchhHHHHHHHhC
Q 001291 1079 GPLGHHSCHLISYFEVC 1095 (1106)
Q Consensus 1079 G~~~~~~~~~~~yf~~~ 1095 (1106)
|+. +++++||+.+
T Consensus 253 G~~----~~~~~ff~~~ 265 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL 265 (613)
T ss_pred cCH----HHHHHHHHhC
Confidence 986 6799999875
No 45
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.3e-43 Score=398.39 Aligned_cols=202 Identities=18% Similarity=0.223 Sum_probs=154.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.|+||.|.|+. +..++++++|.|.+++.+|+||||||||||||++++|...+ ..|.+.-.-+.
T Consensus 389 vi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~- 453 (614)
T KOG0927|consen 389 VIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN- 453 (614)
T ss_pred eEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc-
Confidence 5788899887753 22589999999999999999999999999999999997663 46766532221
Q ss_pred ChhcccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCCHH
Q 001291 923 KQETFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-QSLVGLPGVNGLSTE 999 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-~~~~~~~g~~~LS~G 999 (1106)
++++..|+.. +.-..++.|+++=. ...+...+.+..++..+||+... +.+ ..+||+|
T Consensus 454 -------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p-----~~~LS~G 513 (614)
T KOG0927|consen 454 -------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVP-----MSQLSDG 513 (614)
T ss_pred -------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccc-----hhhcccc
Confidence 1233344322 11234555654311 11134455678899999998433 333 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||+||.+|+.++..|.||+|||||+|||..+...+.++|.+. ..+||+||||..+ |.+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999875 4689999999875 788899999999998889988
Q ss_pred cCCC
Q 001291 1080 PLGH 1083 (1106)
Q Consensus 1080 ~~~~ 1083 (1106)
++..
T Consensus 590 ~i~~ 593 (614)
T KOG0927|consen 590 DIEI 593 (614)
T ss_pred cHHH
Confidence 7653
No 46
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-43 Score=372.03 Aligned_cols=219 Identities=25% Similarity=0.390 Sum_probs=187.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|++++|+ +.++|+||||+|++|++++|+||||||||||+|+|+|..++ .+|+|.+.|.+.
T Consensus 4 ~i~v~nl~v~y~-------------~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p--~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG-------------NRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKP--SSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC-------------CEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CcceEEEccccc
Confidence 478899998875 22599999999999999999999999999999999997663 589999999887
Q ss_pred ChhcccceEEEEccCCCC--CCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 923 KQETFARISGYCEQNDIH--SPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~--~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
.+...+..+|||||.... ...+||+|-+..+...+.. .....+..++.++++|+.+|+.+++++.++ +||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 654445679999996532 2348999999887544322 111233446789999999999999999875 59999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|+||+.|||||+++|++|+|||||+|+|+.++..++++|++++++|+|||+|+||++ .+.++||+++.|+ +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999998 5899999999996 4799999
Q ss_pred cCCCc
Q 001291 1080 PLGHH 1084 (1106)
Q Consensus 1080 ~~~~~ 1084 (1106)
++.+-
T Consensus 221 ~~~~~ 225 (254)
T COG1121 221 PPEEV 225 (254)
T ss_pred Chhhc
Confidence 98863
No 47
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-43 Score=375.81 Aligned_cols=220 Identities=24% Similarity=0.333 Sum_probs=190.7
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.+++|+..+... ..+...+|+|||++|++||++||+|.||||||||++++.++..+ .+|.|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecc
Confidence 4567776444320 11235799999999999999999999999999999999998764 5899999997653
Q ss_pred h------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 Q------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
. ...|+.+|+++|++.++...||+||+.|...+.. .++++.++++.++++.+||.+..+... .+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcC
Confidence 2 3467789999999999999999999999877653 567888899999999999998888763 4799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
|||||||+|||||+.+|+|||+|||||+|||++.+.|.++|+++.++ |.|||+|||+|+. +.+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999654 9999999999984 7889999999985 7999
Q ss_pred EEecCCC
Q 001291 1077 YVGPLGH 1083 (1106)
Q Consensus 1077 ~~G~~~~ 1083 (1106)
+.|+..+
T Consensus 222 E~G~v~~ 228 (339)
T COG1135 222 EEGTVSE 228 (339)
T ss_pred EeccHHH
Confidence 9998764
No 48
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.5e-43 Score=375.60 Aligned_cols=227 Identities=27% Similarity=0.398 Sum_probs=194.5
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+..+|+++.|+ ++.+|+||||+|++|++++|+|||||||||||++|+|..++ .+|.|.++|.++.
T Consensus 3 L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i~ 67 (258)
T COG1120 3 LEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDIA 67 (258)
T ss_pred eEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCchh
Confidence 56788888774 46799999999999999999999999999999999997763 4899999999875
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCC-CCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP-EVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ..+++.+||+||.+...+.+||+|-+.++..-+... ....++.++.++++|+.+++.+++++.+ .+||||
T Consensus 68 ~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGG 142 (258)
T COG1120 68 SLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGG 142 (258)
T ss_pred hcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChh
Confidence 4 456789999999998888899999999886543322 1234444557999999999999999875 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||||+.|||||+++|+||+||||||+||...+..++++++++. ++|.|||+++||++. ...+||++++|++ |+++..
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a~ 220 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVAQ 220 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEee
Confidence 9999999999999999999999999999999999999999998 459999999999985 7789999999985 799999
Q ss_pred ecCCCc--hhHHHHHH
Q 001291 1079 GPLGHH--SCHLISYF 1092 (1106)
Q Consensus 1079 G~~~~~--~~~~~~yf 1092 (1106)
|++.+- ...+-+.|
T Consensus 221 G~p~evlT~e~l~~Vy 236 (258)
T COG1120 221 GTPEEVLTEENLREVY 236 (258)
T ss_pred cCcchhcCHHHHHHHh
Confidence 998753 34455555
No 49
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.2e-43 Score=389.87 Aligned_cols=217 Identities=30% Similarity=0.438 Sum_probs=196.9
Q ss_pred eeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCcc-ceEEEEcCCCCCCCCCCHHH
Q 001291 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE-RTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1106)
+|+|+|++|+.||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..+||+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 999999999999999999999999999999999999998 99999999999998774 88999999999999999999
Q ss_pred HHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCC
Q 001291 246 TLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLS 325 (1106)
||+|+.+.++.. .++.+.+++++.+.|+|++..|+.+.. ||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~P~~-----LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRKPLQ-----LS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 999999887541 123456788999999999999998765 99
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEE
Q 001291 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 405 (1106)
|||||||++||||+.+|++++||||+|.||...+.++...++++. ..-+++++.++|+..|++.++|+|++|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh-~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLH-ERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHH-HhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999999999864 4556778889999999999999999999999999
Q ss_pred EcCHHHHHHHHHhcCCCCCCCCChhHHHH
Q 001291 406 QGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1106)
Q Consensus 406 ~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ 434 (1106)
.|++.++ |..|.+.-+|.|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999999 45677777777764
No 50
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.5e-43 Score=358.92 Aligned_cols=234 Identities=25% Similarity=0.368 Sum_probs=202.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.+++|+.++ +++.+++||||+|++||+++|+||||+||||||++|.|..++ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 47777777553 567899999999999999999999999999999999998774 589999999986
Q ss_pred Ch------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc-cccccCCCCCCC
Q 001291 923 KQ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNG 995 (1106)
Q Consensus 923 ~~------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~-~~~~~~~~g~~~ 995 (1106)
.+ ...++++|+++|.-.++..+||+||+.|.. |.....+.+..++.+..-|+.+||... .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 43 235678999999999999999999999864 334456677777788888999999876 5554 457
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 996 LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
||||++||++|||||+.+|+|||+||||+||||.+...+-++|+++.++ |.|+++||||++ +++..|||+++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999866 999999999998 58999999999985 79
Q ss_pred EEEEecCCC----chhHHHHHHHhCCCCcc
Q 001291 1075 EVYVGPLGH----HSCHLISYFEVCPDAHF 1100 (1106)
Q Consensus 1075 ~~~~G~~~~----~~~~~~~yf~~~~g~~~ 1100 (1106)
++..|++.+ +...+-+||.+.++=|-
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~gpi 253 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRDGPI 253 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCCCce
Confidence 999999875 34558899998887654
No 51
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-43 Score=370.69 Aligned_cols=224 Identities=28% Similarity=0.373 Sum_probs=196.2
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc------cceEEEEcCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1106)
...++|+|||++|++|++.+|+|+||||||||++++.++..|+ +|+|.++|.++..... ++.||+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 4567999999999999999999999999999999999999999 9999999988765532 478999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
++...||.||++|..+..+.. .++.+.++.++++.+||++.+|.+.
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccCc
Confidence 999999999999998876531 1234567889999999999999887
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
.. |||||||||+|||||+.+|+||+.|||||+|||.|+..|+++|+++.+. -+.+|+.++|.++-+-++||||.
T Consensus 140 ~q-----LSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~-lglTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 140 AQ-----LSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRE-LGLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred hh-----cCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHH-cCCEEEEEechHHHHHHHhhhhe
Confidence 65 9999999999999999999999999999999999999999999998765 46677778999999999999999
Q ss_pred EecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhc
Q 001291 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVT 437 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~ 437 (1106)
+|++|+++++|+..++ |..|.+.-..+|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999988 34565555555665543
No 52
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=363.85 Aligned_cols=207 Identities=26% Similarity=0.383 Sum_probs=180.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++++++++. ...+|+||||+|.+||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 356777776653 35799999999999999999999999999999999998774 589999999887
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
.. ....+|||+|++.++|..||+||+.|+...+. ...+++++++.++++.+||.++.++. +.+|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 24568999999999999999999999876653 34556667899999999999999987 4579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecC-CEE
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG-GRE 1075 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~g-G~~ 1075 (1106)
||+|||||+.+|+||+||||+++||+.++..+++.+.++.+ .++|||+||||.+ |....+|||++|.++ |++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCCCcce
Confidence 99999999999999999999999999999999999999864 5899999999998 577789999999875 544
No 53
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.6e-43 Score=389.98 Aligned_cols=224 Identities=29% Similarity=0.427 Sum_probs=201.5
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1106)
...+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|.+++...+ +|.+++|+|+..+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 467999999999999999999999999999999999999999 9999999999998766 578999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||++|+.+.++.. ..++...+++++++.++|++.+++.+..
T Consensus 94 V~~NVafGLk~~~~~---------------------------------~~~~i~~rv~e~L~lV~L~~~~~R~p~q---- 136 (352)
T COG3842 94 VEENVAFGLKVRKKL---------------------------------KKAEIKARVEEALELVGLEGFADRKPHQ---- 136 (352)
T ss_pred HHHHhhhhhhhcCCC---------------------------------CHHHHHHHHHHHHHHcCchhhhhhChhh----
Confidence 999999998744311 1122446789999999999999988865
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||+|||++||||+.+|++||||||.|+||..-+.++...++++.+.. +.+.|.++|+..|++.++|+|++|++|+
T Consensus 137 -LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 137 -LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred -hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 99999999999999999999999999999999999999999999987655 6777779999999999999999999999
Q ss_pred EEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhhc
Q 001291 403 IVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVT 437 (1106)
Q Consensus 403 iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~ 437 (1106)
|...|+++++ |..|...-+|+|+-+..
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~N 241 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGESN 241 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcce
Confidence 9999999999 56788888899987643
No 54
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=358.26 Aligned_cols=208 Identities=27% Similarity=0.416 Sum_probs=186.9
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1106)
++.+++|+|++|++||+++++|||||||||+||+|.+++.|+ +|+|.+||.++.+... +|.+|||-|.-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 567999999999999999999999999999999999999998 9999999999877544 6899999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc--cccccccC
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI--CADTMVGD 318 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~ 318 (1106)
+||.|||++-..+.+.. .++.+.+++++|+.+||+. .++++..+
T Consensus 90 ~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~~~~~RyP~e 135 (309)
T COG1125 90 LTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPSEYADRYPHE 135 (309)
T ss_pred ccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHHHHhhcCchh
Confidence 99999999987776542 1234567899999999974 77777655
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++-+.. +++|+.++|+..|++.++|||++|
T Consensus 136 -----LSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm 209 (309)
T COG1125 136 -----LSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVM 209 (309)
T ss_pred -----cCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEe
Confidence 99999999999999999999999999999999999999999998875544 566677899999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 001291 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
++|+++..+++++++.
T Consensus 210 ~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 210 DAGEIVQYDTPDEILA 225 (309)
T ss_pred cCCeEEEeCCHHHHHh
Confidence 9999999999999974
No 55
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-42 Score=357.72 Aligned_cols=215 Identities=26% Similarity=0.358 Sum_probs=189.4
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
++|+||+..| +++.+++|+||+|++||+++++|||||||||+|++|.+...+ .+|+|+|+|.++.
T Consensus 2 I~~~nvsk~y-------------~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRY-------------GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhc-------------CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 4677777544 356799999999999999999999999999999999998774 5899999999876
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCH
Q 001291 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP--LRQSLVGLPGVNGLST 998 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~--~~~~~~~~~g~~~LS~ 998 (1106)
. ...||.+|||-|...++|.+||.||+.+--.+. ..++++.+++++|+|++++|.+ +.++. +++|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 457889999999999999999999998765443 4567778889999999999975 66665 467999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
||+|||.+||||+++|+||+||||+++|||-++..+++.+.++.++ |+|||+||||++ +.+.++|||.+|+ +|+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999999754 999999999998 6889999999998 689999
Q ss_pred EecCCC
Q 001291 1078 VGPLGH 1083 (1106)
Q Consensus 1078 ~G~~~~ 1083 (1106)
.+++.+
T Consensus 217 ~~~P~~ 222 (309)
T COG1125 217 YDTPDE 222 (309)
T ss_pred eCCHHH
Confidence 998764
No 56
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.6e-41 Score=415.75 Aligned_cols=253 Identities=33% Similarity=0.592 Sum_probs=215.3
Q ss_pred CCceeeecceeeeeeccch----------------hhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhh
Q 001291 840 EPYSLTFDEVVYSVDMPQQ----------------MKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 903 (1106)
Q Consensus 840 ~~~~l~f~~v~y~v~~p~~----------------~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~ 903 (1106)
.+.++.|.++.|.++.... .+.....++++.+|+|||+++++||++||+||||||||||+++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 3678999999999875531 011112345678999999999999999999999999999999999
Q ss_pred CCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc
Q 001291 904 GRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL 983 (1106)
Q Consensus 904 g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~ 983 (1106)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|.+.++.+.....+++++.++++++.++|.+.
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999876432 345689999999999999999999998877655444455566778999999999998
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhc
Q 001291 984 RQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1063 (1106)
Q Consensus 984 ~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~ 1063 (1106)
.+..++.....+||||||||++||+||+.+|+||||||||+|||+.++..+++.|++++++|+|||+++||++.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 88887765567899999999999999999999999999999999999999999999998889999999999986688999
Q ss_pred CeEEEEecCCEEEEEecCCCchhHHHHHHHhCCCC
Q 001291 1064 DELFLMKRGGREVYVGPLGHHSCHLISYFEVCPDA 1098 (1106)
Q Consensus 1064 D~v~~l~~gG~~~~~G~~~~~~~~~~~yf~~~~g~ 1098 (1106)
|++++|++ |+++|.|+. .++++||+++.-.
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G~~ 304 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVGFS 304 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCCCC
Confidence 99999984 799999985 5899999998543
No 57
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-42 Score=351.46 Aligned_cols=225 Identities=26% Similarity=0.322 Sum_probs=191.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.+++++-.|| +++++|+||||+|++||++||+|+|||||||||++|.|... +.+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 467788775553 46789999999999999999999999999999999999765 3589999999764
Q ss_pred Ch------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-----CCCChHHHHHHHHHHHHHcCCCcccccccCCC
Q 001291 923 KQ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-----PEVNSETRKMFIEEVMELVELKPLRQSLVGLP 991 (1106)
Q Consensus 923 ~~------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-----~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~ 991 (1106)
.. ..+++.+|+++|++.+.+.++|.+|++.+..-+.+ .....++.+..+-++|+.+|+.+.+..+.
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 34577899999999999999999999887533321 23344566667889999999999887775
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
++|||||+|||+|||||+++|+|||.|||+++|||.+++.||+.|+++.+ +|.|||++.|+.++ ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 46999999999999999999999999999999999999999999999974 59999999999986 678999999998
Q ss_pred cCCEEEEEecCCCchhHH
Q 001291 1071 RGGREVYVGPLGHHSCHL 1088 (1106)
Q Consensus 1071 ~gG~~~~~G~~~~~~~~~ 1088 (1106)
. |+++|.|+..+.....
T Consensus 223 ~-G~ivfDg~~~el~~~~ 239 (258)
T COG3638 223 A-GRIVFDGPASELTDEA 239 (258)
T ss_pred C-CcEEEeCChhhhhHHH
Confidence 5 7999999988754443
No 58
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-42 Score=363.17 Aligned_cols=225 Identities=28% Similarity=0.453 Sum_probs=192.2
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCc---cCCCCCc-cceEEEEcCCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGH---NMDEFVP-ERTAAYISQHDNHI 238 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~~ 238 (1106)
....+++|||+.|+.||+++|+|||||||||||++|||+..|+ +|.|.+||. +.+.... .|.||||+|+..+|
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3456899999999999999999999999999999999999998 999999999 5555333 47899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
++|||.+||+|+.+++.. .| ...+.+.+++++|+.+.|++.++.+.-
T Consensus 90 ~HmtVa~NIAFGl~~~~~-------------------~p-------------~~~~~r~rv~elL~lvqL~~la~ryP~- 136 (345)
T COG1118 90 PHMTVADNIAFGLKVRKE-------------------RP-------------SEAEIRARVEELLRLVQLEGLADRYPA- 136 (345)
T ss_pred ccchHHhhhhhccccccc-------------------CC-------------ChhhHHHHHHHHHHHhcccchhhcCch-
Confidence 999999999999877521 01 112234568889999999999988765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
+|||||||||++||||+..|+||+||||+++||...+.++-+.|+++.... +.+.+.++|+..|++++||+|++|
T Consensus 137 ----QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl 211 (345)
T COG1118 137 ----QLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVL 211 (345)
T ss_pred ----hcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEe
Confidence 499999999999999999999999999999999999999999999875543 556666899999999999999999
Q ss_pred cCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhh
Q 001291 399 SDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 436 (1106)
++|+|...||++++. ..|...-++.|+-++
T Consensus 212 ~~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~~ 241 (345)
T COG1118 212 NQGRIEQVGPPDEVY--------DHPASRFVARFLGEV 241 (345)
T ss_pred cCCeeeeeCCHHHHh--------cCCCccceecccccc
Confidence 999999999999984 446555566665543
No 59
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-41 Score=355.44 Aligned_cols=193 Identities=29% Similarity=0.432 Sum_probs=166.7
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh------hcc-cceEEEEccCCCCC
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ------ETF-ARISGYCEQNDIHS 941 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~-~~~~g~v~q~~~~~ 941 (1106)
..+|++|||+|++||++||+|||||||||||++|.|...+ .+|.+.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998764 58999999976532 223 34699999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccc-cccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEe
Q 001291 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-SLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1020 (1106)
Q Consensus 942 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~-~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLD 1020 (1106)
|.+||.||+.+...+... .....++.++++++.+||.+..+ .. +.+|||||||||+|||||+.+|+|||.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~---~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGK---SAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCC---ChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 999999999987655432 22245667889999999986665 44 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 1021 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 1021 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
|||.+||.++.+.|+++++++.++ |+|||++|||+. +...|||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~--lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPE--LAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHH--HHHhCCEEEEEeCCe
Confidence 999999999999999999999765 999999999984 678999999998754
No 60
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.3e-42 Score=365.44 Aligned_cols=210 Identities=32% Similarity=0.468 Sum_probs=183.3
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1106)
++++|+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|.++.+... .|.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 457999999999999999999999999999999999999998 9999999999877654 3789999999888889
Q ss_pred CCHHHHHHHHHHhc-CCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 241 MTVRETLAFAARCQ-GVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
+||+|-+.++..-. +. ++ ...++....++.+|+.+|+.+.+++.+.+
T Consensus 91 ~tV~d~V~~GR~p~~~~-------------------~~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~~- 138 (258)
T COG1120 91 LTVYELVLLGRYPHLGL-------------------FG------------RPSKEDEEIVEEALELLGLEHLADRPVDE- 138 (258)
T ss_pred cEEeehHhhcCCccccc-------------------cc------------CCCHhHHHHHHHHHHHhCcHHHhcCcccc-
Confidence 99999999975321 10 00 01112234688899999999999999877
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
|||||||||.||+||+.+|++|+||||||+||...+.++++.++++.+.. +.+++.++|+...+..+||++++|+
T Consensus 139 ----LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk 213 (258)
T COG1120 139 ----LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLK 213 (258)
T ss_pred ----cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999998754 4555667899999999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 001291 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|+++.+|++++++
T Consensus 214 ~G~i~a~G~p~evl 227 (258)
T COG1120 214 DGKIVAQGTPEEVL 227 (258)
T ss_pred CCeEEeecCcchhc
Confidence 99999999998875
No 61
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-41 Score=378.06 Aligned_cols=212 Identities=32% Similarity=0.444 Sum_probs=185.2
Q ss_pred ceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCC
Q 001291 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVT 945 (1106)
Q Consensus 868 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~g~v~q~~~~~~~~t 945 (1106)
++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT 94 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELT 94 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCCcccc
Confidence 46799999999999999999999999999999999998764 58999999987654 456678999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCC
Q 001291 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1106)
Q Consensus 946 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsg 1025 (1106)
|+|++.|.+.++.... ...++.++++++.++|.+..++.+ .+||+||||||.||+||+.+|++|||||||+|
T Consensus 95 ~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~-----~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~G 166 (293)
T COG1131 95 VRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKV-----RTLSGGMKQRLSIALALLHDPELLILDEPTSG 166 (293)
T ss_pred HHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcch-----hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcC
Confidence 9999999998886432 445567899999999998555553 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCC-ceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCchhHHHHHHHhC
Q 001291 1026 LDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEVC 1095 (1106)
Q Consensus 1026 LD~~~~~~i~~~l~~~~~~g-~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~yf~~~ 1095 (1106)
||+.++..+++.|++++++| +||+++||+++ ++...||+|++|++ |++++.|+.. .+.+.|...
T Consensus 167 LDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~~----~l~~~~~~~ 231 (293)
T COG1131 167 LDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTPE----ELKEKFGGK 231 (293)
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCHH----HHHHhhccC
Confidence 99999999999999999887 89999999998 68888999999985 7999999653 355554443
No 62
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-42 Score=343.55 Aligned_cols=220 Identities=23% Similarity=0.301 Sum_probs=187.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCC---CCCceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR---KTGGYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~---~~~~~~~G~i~i~g 919 (1106)
.+..+|++.+|. ++.+|+|||+.|++++++||||||||||||||+++.+. .++-..+|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 577888887764 46799999999999999999999999999999999984 33456789999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.++.. ..+|+.+|.|+|.|.-+| +|++||+.|+.++....+ ++.++.|++.|+...|++-........+ .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~sa-~ 148 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKSA-L 148 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCCc-c
Confidence 88643 346788999999999998 999999999987764332 6677889999999999864333333222 3
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+|||||+|||||||||+.+|+|||||||||+|||.+...|-++|.+++ +.-|||+|||.|. ......|+..++.. |+
T Consensus 149 ~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~ 225 (253)
T COG1117 149 GLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GE 225 (253)
T ss_pred CCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cE
Confidence 599999999999999999999999999999999999999999999997 4699999999997 46778999999986 69
Q ss_pred EEEEecCCC
Q 001291 1075 EVYVGPLGH 1083 (1106)
Q Consensus 1075 ~~~~G~~~~ 1083 (1106)
++++|+...
T Consensus 226 LvE~g~T~~ 234 (253)
T COG1117 226 LVEFGPTDK 234 (253)
T ss_pred EEEEcCHHh
Confidence 999998753
No 63
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.7e-41 Score=377.43 Aligned_cols=212 Identities=33% Similarity=0.464 Sum_probs=186.3
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC--CccceEEEEcCCCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF--VPERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1106)
.+.+|+|||+++++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 468999999999999999999999999999999999999998 99999999887652 3357899999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+|||.|.+++.+... ......++++++.+||++.+++.++
T Consensus 94 T~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~---- 135 (293)
T COG1131 94 TVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKANKKVR---- 135 (293)
T ss_pred cHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhhCcchh----
Confidence 99999999998876421 0122457889999999986666665
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
+||+|||||++||.||+++|++|||||||+|||+.++.++++.|++++.. ++++|+..+|...++..+||+|++|++|
T Consensus 136 -~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 136 -TLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred -hcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 49999999999999999999999999999999999999999999998764 4466666788899999999999999999
Q ss_pred eEEEEcCHHHHHHHHHh
Q 001291 402 QIVYQGPRELVLEFFES 418 (1106)
Q Consensus 402 ~iv~~G~~~~~~~~f~~ 418 (1106)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998765543
No 64
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.7e-41 Score=335.61 Aligned_cols=215 Identities=27% Similarity=0.333 Sum_probs=184.6
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.|++|+-.|+. +.++|+||||+|++||++-|+||||||||||+++|++...+ ..|.|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~p--t~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERP--TRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcC--CCceEEECCeecc
Confidence 567888765542 35699999999999999999999999999999999997653 5899999999864
Q ss_pred h------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 Q------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
. .-.+|++|+|+|+..+.+..||+||+.|...... ....+.++++.++|+.+||.+..+.. +.+||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 3 1257889999999999999999999999876553 34566778899999999999988876 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
||||||++||||++.+|++|+.||||.+|||..+..||+++.++.+.|.|||+.|||.++ +...-.|++.|.+ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999999899999999999764 5555678888875 78887
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
....|
T Consensus 218 d~~~g 222 (223)
T COG2884 218 DESRG 222 (223)
T ss_pred ccccC
Confidence 65443
No 65
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-41 Score=354.36 Aligned_cols=194 Identities=27% Similarity=0.402 Sum_probs=173.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
..+|+|+|++|.+||+++|+|||||||||||++|+|+..|+ +|+|.++|.++. .+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999998 999999999883 4567899999999999999999
Q ss_pred HHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCC
Q 001291 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgL 324 (1106)
||+.|+....+.. ..+...+++.+|+.+||....|..... |
T Consensus 91 ~NV~l~l~~~~~~----------------------------------~~e~~~~a~~~L~~VgL~~~~~~~P~q-----L 131 (248)
T COG1116 91 DNVALGLELRGKS----------------------------------KAEARERAKELLELVGLAGFEDKYPHQ-----L 131 (248)
T ss_pred hhheehhhccccc----------------------------------hHhHHHHHHHHHHHcCCcchhhcCccc-----c
Confidence 9999998776421 111233678899999999999988765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC--Ce
Q 001291 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD--GQ 402 (1106)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~--G~ 402 (1106)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+.. +.+|+.++|+.+|+..++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCCCcc
Confidence 9999999999999999999999999999999999999999998887654 56677789999999999999999998 44
Q ss_pred E
Q 001291 403 I 403 (1106)
Q Consensus 403 i 403 (1106)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 4
No 66
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.3e-41 Score=344.75 Aligned_cols=210 Identities=27% Similarity=0.390 Sum_probs=181.5
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc------cceEEEEcCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1106)
..+.||+|||++|++||+++|+|||||||||||+.|.|+++|+ +|+|.++|.++..... ++++|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 3467999999999999999999999999999999999999998 9999999999865532 467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccc-cccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC-ADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-~dt~ 315 (1106)
+|..+||+||+.|..+-.. .+ | ....+..+..-|+..||... +|.+
T Consensus 96 LFssltV~eNVafplre~~---------~l----------p--------------~~~i~~lv~~KL~~VGL~~~~~~~~ 142 (263)
T COG1127 96 LFSSLTVFENVAFPLREHT---------KL----------P--------------ESLIRELVLMKLELVGLRGAAADLY 142 (263)
T ss_pred cccccchhHhhheehHhhc---------cC----------C--------------HHHHHHHHHHHHHhcCCChhhhhhC
Confidence 9999999999999765321 01 1 11123345555888999877 7777
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
..+ ||||++||+++|||++.+|+++|+||||+||||.++..+.++++++.+.. +.++++++|+.++++..+|+|
T Consensus 143 PsE-----LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv 216 (263)
T COG1127 143 PSE-----LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRV 216 (263)
T ss_pred chh-----hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceE
Confidence 765 99999999999999999999999999999999999999999999987654 556666899999999999999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|.+|+|+.+|+++++.+
T Consensus 217 ~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 217 AVLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999864
No 67
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-41 Score=339.78 Aligned_cols=202 Identities=28% Similarity=0.371 Sum_probs=183.9
Q ss_pred EEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCHH
Q 001291 870 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVTVY 947 (1106)
Q Consensus 870 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~g~v~q~~~~~~~~tv~ 947 (1106)
++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|.++|.+... ...++.+|.++.+..++..+|++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 489999999999999999999999999999999998764 58999999998643 34578899999877888899999
Q ss_pred HHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCC
Q 001291 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1027 (1106)
Q Consensus 948 e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD 1027 (1106)
|||.|.+.+. +...++.+++++++.+.++|.++.|+.++ +||.||||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 9999998886 34567778889999999999999999975 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1028 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1028 ~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
..+.+.+.+.++++.++|++||++||.++ ++...||+++++++ |++++.|+...
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~~ 219 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIEA 219 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHHH
Confidence 99999999999999999999999999997 78889999999986 78999998764
No 68
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-41 Score=338.21 Aligned_cols=211 Identities=31% Similarity=0.363 Sum_probs=186.5
Q ss_pred CccccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCC
Q 001291 160 STKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNH 237 (1106)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~ 237 (1106)
+.+....+++||||.++.|++++|+|||||||||+|++|++++.|+ +|+|+++|.+..... .++.+|.++.+..+
T Consensus 10 ~y~~~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~gl 86 (245)
T COG4555 10 SYGSKVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGL 86 (245)
T ss_pred hccCHHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcCh
Confidence 3344456999999999999999999999999999999999999999 999999999875432 36889999987889
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
+..||++|||.|.+++.+.. ..+.+.+++.+.+.|+|..|.|+.+|
T Consensus 87 Y~RlT~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~ 132 (245)
T COG4555 87 YARLTARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVG 132 (245)
T ss_pred hhhhhHHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHh
Confidence 99999999999999876532 12234567889999999999999998
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
+ +|-|+||||+|||||+.+|++++|||||||||..++..+.+.++++. ..+.+|+..+|..+|+..+||+|++
T Consensus 133 ~-----~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrviv 205 (245)
T COG4555 133 E-----FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIV 205 (245)
T ss_pred h-----hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEE
Confidence 7 99999999999999999999999999999999999999999999863 3456677789999999999999999
Q ss_pred ecCCeEEEEcCHHHHHH
Q 001291 398 LSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+.|+++++.+
T Consensus 206 lh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 206 LHKGEVVLEGSIEALDA 222 (245)
T ss_pred EecCcEEEcCCHHHHHH
Confidence 99999999999988764
No 69
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=358.51 Aligned_cols=207 Identities=30% Similarity=0.455 Sum_probs=185.3
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCc---cCCh-hcccceEEEEccCCCCCC
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY---PKKQ-ETFARISGYCEQNDIHSP 942 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~g~v~q~~~~~~ 942 (1106)
+...+++|||++|+.||++||.|||||||||||++|+|..++ ..|.|.++|. +.++ ....|.+|||+|+..+++
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 456789999999999999999999999999999999998874 5899999998 5444 334578999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCC
Q 001291 943 FVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1022 (1106)
Q Consensus 943 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEP 1022 (1106)
.|||.+|+.|+...+ ....+..+.+.+++++|+.++|.++.+... .+|||||||||++||||+.+|++||||||
T Consensus 91 HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~vLLLDEP 164 (345)
T COG1118 91 HMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDEP 164 (345)
T ss_pred cchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCCeEeecCC
Confidence 999999999998776 233456677888999999999999998874 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1023 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1023 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
+++||+.-++.+.+.|+++.++ |.|+|+||||++ +..+.||||++|++ |+|...|+..+
T Consensus 165 f~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~e 224 (345)
T COG1118 165 FGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPDE 224 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHHH
Confidence 9999999999999999999876 999999999998 79999999999986 78999998764
No 70
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=353.82 Aligned_cols=208 Identities=28% Similarity=0.437 Sum_probs=177.8
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCC--CCCCCCCH
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHD--NHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 243 (1106)
++|+|||+.+++|++++|+||||||||||+|+|+|++.|. +|+|.++|.+......+..||||||.. .+-..+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 5999999999999999999999999999999999999998 999999999887766667899999953 33445899
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+|.+..+..-+. + + .... ..+.+..++++|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~~-g-~---~~~~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGKK-G-W---FRRL-------------------------NKKDKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCcccc-c-c---cccc-------------------------cHHHHHHHHHHHHHcCchhhhCCcccc-----
Confidence 999998732211 0 0 0000 111245688999999999999999998
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||+|||-|||||+.+|++|+|||||+|+|+.++..|++.|+++.+. +.+|++++|+...+.++||+|+.| ++++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~L-n~~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICL-NRHL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEE-cCee
Confidence 9999999999999999999999999999999999999999999998764 566777899999999999999999 5778
Q ss_pred EEEcCHHHHHH
Q 001291 404 VYQGPRELVLE 414 (1106)
Q Consensus 404 v~~G~~~~~~~ 414 (1106)
++.|+++++..
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999998753
No 71
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-40 Score=369.90 Aligned_cols=229 Identities=28% Similarity=0.380 Sum_probs=198.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|++-++. +..+++|||++|+.||+++|+|||||||||||++|+|+.. +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 466777765543 2229999999999999999999999999999999999876 3589999999987
Q ss_pred Ch-hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 923 KQ-ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 923 ~~-~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
+. ....|.+++|+|+..++|.|||+||+.|+...+. ..+++.+++++++.+.++|.++.++.. .+||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhH
Confidence 66 3456789999999999999999999999987763 456777889999999999999999874 57999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||+|||||+++|++++||||.|+||++.+..+...|+++.++ |.|+|.+|||.. +.+..+||+.+|+ +|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998754 899999999975 7888999999998 689999998
Q ss_pred CCC----chhHHHHHHHhCC
Q 001291 1081 LGH----HSCHLISYFEVCP 1096 (1106)
Q Consensus 1081 ~~~----~~~~~~~yf~~~~ 1096 (1106)
+.+ -.+..+.-|-+.|
T Consensus 218 p~ely~~P~n~fVA~FiG~p 237 (338)
T COG3839 218 PLELYERPANLFVAGFIGSP 237 (338)
T ss_pred hHHHhhCccchhhhhhcCCh
Confidence 764 2445666666544
No 72
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.6e-40 Score=409.27 Aligned_cols=224 Identities=41% Similarity=0.709 Sum_probs=202.6
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc-eeEEEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYPKKQETFARISGYCEQNDIHSPFVT 945 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~t 945 (1106)
+++++|+|||+++++||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|++.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999986543 358999999998765566778999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCC-CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCC
Q 001291 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1024 (1106)
Q Consensus 946 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g-~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTs 1024 (1106)
|+||+.|++.++.+.....+++++.++++++.++|.+..|..+|.++ ..+||||||||++||+||+.+|+||+|||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999988876666666777789999999999999999988654 45799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCchhHHHHHHHhC
Q 001291 1025 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEVC 1095 (1106)
Q Consensus 1025 gLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~yf~~~ 1095 (1106)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||+++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~ 261 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL 261 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc
Confidence 9999999999999999988899999999999877899999999998 5799999986 5789999997
No 73
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=371.55 Aligned_cols=227 Identities=26% Similarity=0.386 Sum_probs=195.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++||+-.| ++..+++|||++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~i~~v~k~y-------------g~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSF-------------GDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeec-------------CCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 46777776444 456899999999999999999999999999999999998774 589999999988
Q ss_pred Chh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 923 ~~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
... ..+|.+|+|+|+..++|.+||.||+.|+..++ .....++.+++++++++.++|.++.++.+ .+||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHH
Confidence 653 34678999999999999999999999997643 23445667788999999999999988874 57999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||+|||||+.+|++||||||.|+||.+-+..++.-++++.+ .|.|.|++|||.+ +.+..+|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 999999999999999999999999999999999999999865 4999999999987 68889999999975 79999998
Q ss_pred CCC----chhHHHHHHH
Q 001291 1081 LGH----HSCHLISYFE 1093 (1106)
Q Consensus 1081 ~~~----~~~~~~~yf~ 1093 (1106)
+.+ ..+..+..|=
T Consensus 221 P~eiY~~P~~~fVA~Fi 237 (352)
T COG3842 221 PEEIYERPATRFVADFI 237 (352)
T ss_pred HHHHhhCcchHHHHHHh
Confidence 774 2344555543
No 74
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.7e-40 Score=345.69 Aligned_cols=196 Identities=28% Similarity=0.438 Sum_probs=168.9
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1106)
..++|++||+.|++||+++|+|||||||||||++|.|...|+ +|.|.++|.++..... ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 378999999999999999999999999999999999999998 9999999988876542 357999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccc-cc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICAD-TM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d-t~ 315 (1106)
++|++||+||+...+.+.+.... .....++.+++.+||++..+ ..
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~~~ 139 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLKKK 139 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhccCC
Confidence 99999999999998766543110 12335677899999997666 66
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+.+ |||||||||+|||||+.+|+++|.||||.+||+.++..|++.++++.+.. ++++++++|+ +++...|||+
T Consensus 140 p~e-----LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd-~~lA~~~dr~ 212 (226)
T COG1136 140 PSE-----LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHD-PELAKYADRV 212 (226)
T ss_pred chh-----cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCC-HHHHHhCCEE
Confidence 765 99999999999999999999999999999999999999999999987654 4555556776 4677899999
Q ss_pred EEecCCeE
Q 001291 396 ILLSDGQI 403 (1106)
Q Consensus 396 ilL~~G~i 403 (1106)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999994
No 75
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-40 Score=339.53 Aligned_cols=217 Identities=25% Similarity=0.358 Sum_probs=182.7
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc------cceEEEEcCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDN 236 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1106)
..+++|+|||+.|++|||++|+|||||||||||++|.|..+|+ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 4467999999999999999999999999999999999999998 9999999988765432 468999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
+.+.+||.+|+..+...+. .. ...-.++.+ ++.+..+-..|+.+|+.+.+.+..
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~---------~~slfglfs---------------k~dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--ST---------WRSLFGLFS---------------KEDKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hH---------HHHHhCCCC---------------HHHHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998754221 01 111112221 122334566799999999999888
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
+. |||||+|||+|||||+.+|+++|-|||+++||+.++.++++.|+++....+.|+|+ .+|..+-+.++||||+
T Consensus 146 ~~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~-nLH~vdlA~~Y~~Rii 219 (258)
T COG3638 146 ST-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIV-NLHQVDLAKKYADRII 219 (258)
T ss_pred cc-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEE-EechHHHHHHHHhhhe
Confidence 76 99999999999999999999999999999999999999999999998766555555 5567889999999999
Q ss_pred EecCCeEEEEcCHHHHHH
Q 001291 397 LLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1106)
-|++|+|+|+||++++-+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988654
No 76
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-40 Score=335.18 Aligned_cols=222 Identities=26% Similarity=0.396 Sum_probs=182.5
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCccCCCC-----CccceEEEEcCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDN 236 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~ 236 (1106)
.+.+|+|||+.|+++++||++|||||||||||+++..+.+ |..+++|+|.++|+++.+. ..++++|+|+|.+.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 3569999999999999999999999999999999998754 4578899999999998553 23689999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-cccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
-|| +|++||++|+.+.+|... + +.+.+++..|+.-+|- ...|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~--------------------------------~ldeiVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--K--------------------------------ELDEIVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--H--------------------------------HHHHHHHHHHHHhHhHHHhHHHh
Confidence 999 999999999999887522 1 1123445555555553 233333
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
= ....+|||||+||++|||||+-+|+|||||||||+|||.++..|-+++.++. ..-+|++++|.+..+.+..|+.
T Consensus 144 ~--~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~t 218 (253)
T COG1117 144 H--KSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYT 218 (253)
T ss_pred h--CCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhh
Confidence 2 2235699999999999999999999999999999999999999999999874 3566777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHH
Q 001291 396 ILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1106)
..+..|++|+.|+.+++ |..|.++...||+
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999988 4566666555554
No 77
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.1e-39 Score=365.80 Aligned_cols=215 Identities=27% Similarity=0.404 Sum_probs=185.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|++..++ +..+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 578888887663 34699999999999999999999999999999999998763 589999999886
Q ss_pred Ch--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 001291 923 KQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 923 ~~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gq 1000 (1106)
.. ...++.+|||+|++.+++.+|++||+.|.+.++. ....+....++++++.+++.+..++.+ .+||+||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2345779999999999999999999987665432 223344556789999999988777765 3699999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999997 57888999999985 79999987
Q ss_pred CC
Q 001291 1081 LG 1082 (1106)
Q Consensus 1081 ~~ 1082 (1106)
+.
T Consensus 222 ~~ 223 (306)
T PRK13537 222 PH 223 (306)
T ss_pred HH
Confidence 64
No 78
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.5e-39 Score=366.79 Aligned_cols=206 Identities=24% Similarity=0.353 Sum_probs=179.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc------cceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1106)
+++|+|||+++++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++..... ++.++||+|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999998865432 45799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.|+....+.. ..+...++.++++.+||++..|..++.
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~v~e~l~~vgL~~~~~~~~~~ 140 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP----------------------------------KDEIKRKVTELLALVGLGDKHDSYPSN 140 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhCChhh
Confidence 9999999999976543210 011223567789999999988888765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+|||||+.+|++|+|||||++||+.++..+++.|+++.+.. +.+|+.++|+.+.+.++||+|++|
T Consensus 141 -----LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999986543 455666889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 001291 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 79
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.9e-39 Score=370.14 Aligned_cols=207 Identities=27% Similarity=0.404 Sum_probs=181.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.++||+|+..+||++||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999998 9999999998865443 4789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.|+.+.++.. ..+....++.+++.+||++..|+.+.+
T Consensus 94 ~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~L~~~~~~~~~~----- 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------------------------------RAEVAERVAELLDLVGLPGSERKYPGQ----- 134 (353)
T ss_pred HHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhCChhh-----
Confidence 99999987543210 011234578899999999999887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+. .+++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRR-LGVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987653 355667788999999999999999999999
Q ss_pred EEEcCHHHHHH
Q 001291 404 VYQGPRELVLE 414 (1106)
Q Consensus 404 v~~G~~~~~~~ 414 (1106)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999998853
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.7e-39 Score=367.73 Aligned_cols=218 Identities=22% Similarity=0.289 Sum_probs=185.2
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++.+ .....+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 5678888776421 0124699999999999999999999999999999999998764 5899999998764
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. ..++.+||++|+..+++..||+||+.|....+ ....++.++++.++++.++|.+..+..+ .+||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 23567999999999998999999999875433 2334455667899999999998877764 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
|||||||+|||||+.+|++|+||||||+||+.++..++++|+++.++ |.|||++||+++ .+.+.||++++|+ +|+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~-~G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVIS-NGELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEE
Confidence 99999999999999999999999999999999999999999999765 999999999997 4778899999998 47999
Q ss_pred EEecCC
Q 001291 1077 YVGPLG 1082 (1106)
Q Consensus 1077 ~~G~~~ 1082 (1106)
+.|+..
T Consensus 221 ~~g~~~ 226 (343)
T TIGR02314 221 EQGTVS 226 (343)
T ss_pred EEcCHH
Confidence 999864
No 81
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4e-39 Score=369.36 Aligned_cols=208 Identities=23% Similarity=0.343 Sum_probs=182.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCce--eEEEECCccCCCCCc-cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVS--GRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 241 (1106)
..+|+|+|+++++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+|+++
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35999999999999999999999999999999999999998 8 999999998865443 46799999999999999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.|+.+..+.. ..+....++++++.+||++..|+.+++
T Consensus 95 tv~enl~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~~gL~~~~~~~~~~--- 137 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP----------------------------------KADIAERVADALKLVGLGDAAAHLPAQ--- 137 (362)
T ss_pred cHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHhcCCCchhhCChhh---
Confidence 9999999987643211 011223577889999999999988865
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 138 --LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 138 --LSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999998765432567777899999999999999999999
Q ss_pred eEEEEcCHHHHHH
Q 001291 402 QIVYQGPRELVLE 414 (1106)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1106)
+++..|+++++.+
T Consensus 216 ~i~~~g~~~~~~~ 228 (362)
T TIGR03258 216 RLAAHGEPQALYD 228 (362)
T ss_pred EEEEEcCHHHHHh
Confidence 9999999998853
No 82
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-39 Score=368.61 Aligned_cols=206 Identities=22% Similarity=0.364 Sum_probs=181.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
..+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..+||++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999998876544 4789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.|+.+.++.. ..+....++++++.+||.+..|..+.+
T Consensus 96 ~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~~gl~~~~~r~~~~----- 136 (351)
T PRK11432 96 GENVGYGLKMLGVP----------------------------------KEERKQRVKEALELVDLAGFEDRYVDQ----- 136 (351)
T ss_pred HHHHHHHHhHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99999987644321 011234577889999999988887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+|||||+.+|++||||||+++||+.++.++.+.|+++.+. .+++++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQ-FNITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987653 355667789999999999999999999999
Q ss_pred EEEcCHHHHH
Q 001291 404 VYQGPRELVL 413 (1106)
Q Consensus 404 v~~G~~~~~~ 413 (1106)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999999874
No 83
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=348.90 Aligned_cols=214 Identities=23% Similarity=0.334 Sum_probs=187.7
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.+++++|+|+. +..+|+|+|++|++|+.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 567888888752 25799999999999999999999999999999999998764 4799999998854
Q ss_pred ----hhcccceEEEEccCCCCC-CCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 924 ----QETFARISGYCEQNDIHS-PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 924 ----~~~~~~~~g~v~q~~~~~-~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
...+++.+|||+|++..+ ..-||.|.+.|+.... ..+.++.+++++++++.+++.+++++. +.+|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 345678899999999765 4579999999986433 445566888999999999999998876 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
||||||+||.+|+.+|++|+|||||||||+.+++.+++.++++..+ |.|||++|||++ .+.++||++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 689999999998 58888999999985 78999
Q ss_pred EecC
Q 001291 1078 VGPL 1081 (1106)
Q Consensus 1078 ~G~~ 1081 (1106)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 84
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-39 Score=370.32 Aligned_cols=206 Identities=25% Similarity=0.354 Sum_probs=181.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999998 9999999998865443 4789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.|+.+..+.. ..+....++++++.+||++..+..+++
T Consensus 94 ~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~----- 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------------------------------KAEIEERVAEAARILELEPLLDRKPRE----- 134 (356)
T ss_pred HHHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhhCChhh-----
Confidence 99999987543210 011223567889999999999888765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~-~g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRR-LKTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999987653 356677788999999999999999999999
Q ss_pred EEEcCHHHHH
Q 001291 404 VYQGPRELVL 413 (1106)
Q Consensus 404 v~~G~~~~~~ 413 (1106)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999999874
No 85
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.3e-39 Score=374.16 Aligned_cols=215 Identities=27% Similarity=0.438 Sum_probs=180.6
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++|+||+|+||..+ +.++|+|+||+|+|||.||||||||+||||+.++|..... |.+|.|.+||+|
T Consensus 464 G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~~ 531 (716)
T KOG0058|consen 464 GVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGVP 531 (716)
T ss_pred ceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCee
Confidence 4799999999999753 5689999999999999999999999999999999998766 458999999999
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHc-------CCCcccccccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELV-------ELKPLRQSLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~-------~l~~~~~~~~~~~ 991 (1106)
+++ ..+++++|+|.|+|.++. -||+|||.|+.. ....++ ++++.+.. ++.+-.|..+|..
T Consensus 532 i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~----i~~AAk~ANah~FI~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 532 ISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEE----IEAAAKMANAHEFITNFPDGYNTVVGEK 601 (716)
T ss_pred hhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHH----HHHHHHHhChHHHHHhCccccccccCCc
Confidence 865 446788999999999875 699999999853 222222 22332222 3444566777777
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
|. +||||||||++|||||++||.||||||+||+||++++..|+++|.++.+ ++|||+|+|+++ ..+.+|+|+++++
T Consensus 602 G~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~ 677 (716)
T KOG0058|consen 602 GS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK 677 (716)
T ss_pred cc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC
Confidence 65 5999999999999999999999999999999999999999999998865 699999999997 4689999999985
Q ss_pred CCEEEEEecCCC
Q 001291 1072 GGREVYVGPLGH 1083 (1106)
Q Consensus 1072 gG~~~~~G~~~~ 1083 (1106)
|++++.|...+
T Consensus 678 -G~V~E~G~h~e 688 (716)
T KOG0058|consen 678 -GRVVEMGTHDE 688 (716)
T ss_pred -CeEEecccHHH
Confidence 79999986543
No 86
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-39 Score=345.16 Aligned_cols=207 Identities=28% Similarity=0.407 Sum_probs=183.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCC----CCCccceEEEEcCCC-CCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMD----EFVPERTAAYISQHD-NHIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1106)
..+|+|+|+.+++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+.. ....++.+|||+|++ .++.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999998 899999998865 223468899999995 5677
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.-||.|.++|+..+.+... ++...+++.+++.+||.+.++..+.+
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r~p~~- 138 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDRPPFN- 138 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccCCccc-
Confidence 8899999999998776421 12345788899999999999988866
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++.. .++.++|.++|+...+.+++|++++|+
T Consensus 139 ----LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 139 ----LSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred ----cCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999865 445667778999999999999999999
Q ss_pred CCeEEEEcCHHHHHH
Q 001291 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 87
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.3e-39 Score=368.42 Aligned_cols=218 Identities=27% Similarity=0.374 Sum_probs=187.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998865443 4779999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.|+.+.++.. ..+....++++++.+||++..|+.+..
T Consensus 104 ~eNi~~~l~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~p~~----- 144 (375)
T PRK09452 104 FENVAFGLRMQKTP----------------------------------AAEITPRVMEALRMVQLEEFAQRKPHQ----- 144 (375)
T ss_pred HHHHHHHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 99999986543210 011223567889999999999888765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+|||||+.+|++||||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999886643 55667789999999999999999999999
Q ss_pred EEEcCHHHHHHHHHhcCCCCCCCCChhHHH
Q 001291 404 VYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1106)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1106)
+..|+++++. ..|....+|+|+
T Consensus 224 ~~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHH--------hCcccHHHHHhc
Confidence 9999999884 345544455554
No 88
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-39 Score=366.16 Aligned_cols=216 Identities=25% Similarity=0.365 Sum_probs=185.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++..++ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p--~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERI--TSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEECC
Confidence 67788876652 134699999999999999999999999999999999998764 5899999998764
Q ss_pred hh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 924 QE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 924 ~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
.. ..++.+|||+|++.++|.+||+||+.|+...+ .....+.+..++++++.++|.++.++.+ .+|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 32 23467999999999999999999999986433 2334455667899999999998888764 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
||+|||||+.+|++||||||||+||+.++..+.+.|+++.++ |.|+|++|||++ ++.+.||++++|+ +|+++..|++
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCH
Confidence 999999999999999999999999999999999999998765 899999999987 6889999999997 5799999986
Q ss_pred CC
Q 001291 1082 GH 1083 (1106)
Q Consensus 1082 ~~ 1083 (1106)
.+
T Consensus 220 ~~ 221 (356)
T PRK11650 220 VE 221 (356)
T ss_pred HH
Confidence 53
No 89
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-38 Score=347.20 Aligned_cols=214 Identities=25% Similarity=0.355 Sum_probs=178.9
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 4667776653 34699999999999999999999999999999999998663 48999999987532
Q ss_pred ------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 925 ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 925 ------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
..+++.+||++|++.+++.+||.||+.+....+. ....+...+.+.++++.+++.+..++.+ .+|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 2245679999999988888999999988643221 1233344566888999999987766653 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
||||||+|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999997 47788999999985 78999
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
.|+..
T Consensus 218 ~g~~~ 222 (235)
T cd03261 218 EGTPE 222 (235)
T ss_pred ecCHH
Confidence 88753
No 90
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.1e-38 Score=364.53 Aligned_cols=208 Identities=20% Similarity=0.305 Sum_probs=182.2
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1106)
.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 356999999999999999999999999999999999999998 9999999999876543 467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
+++++||+||+.|+.+..+.. ..+...++.++++.+||+...++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWP----------------------------------EQERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHhcCCchhhhCCh
Confidence 999999999999987654321 0112235678899999998888887
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
++ |||||||||+|||||+.+|++|||||||+|||+.++.++.+.++++.+. .+.+|+.++|+..++..++|+|+
T Consensus 128 ~~-----LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~-~~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 DE-----LSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQAT-LQKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred hh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 76 9999999999999999999999999999999999999999999987543 34566778999999999999999
Q ss_pred EecCCeEEEEcCHHHHHH
Q 001291 397 LLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1106)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 91
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.2e-39 Score=316.49 Aligned_cols=201 Identities=25% Similarity=0.394 Sum_probs=175.6
Q ss_pred ceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 001291 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1106)
.+++.|.+||++||+||||||||||||+|+|+..|. +|+|.+||.+.+...| +|-+++++|+.++|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478899999999999999999999999999999998 9999999999876655 578999999999999999999999
Q ss_pred HHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhh
Q 001291 249 FAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQ 328 (1106)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGq 328 (1106)
++..- +-+ +. ++.++.++.++..+||..+.++..+. |||||
T Consensus 94 LGl~P---~Lk------L~-------------------------a~~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGq 134 (231)
T COG3840 94 LGLSP---GLK------LN-------------------------AEQREKVEAAAAQVGLAGFLKRLPGE-----LSGGQ 134 (231)
T ss_pred ccCCc---ccc------cC-------------------------HHHHHHHHHHHHHhChhhHhhhCccc-----cCchH
Confidence 87531 110 11 11234578889999999999999887 99999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEcC
Q 001291 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 408 (1106)
Q Consensus 329 kqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 408 (1106)
||||++||+|+++.+||+||||+|+||+.-+.++...+.+++...+.|++ .++|+.+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tll-mVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLL-MVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEE-EEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 99999999999999999999999999999999999999998776555555 46666788999999999999999999999
Q ss_pred HHHHH
Q 001291 409 RELVL 413 (1106)
Q Consensus 409 ~~~~~ 413 (1106)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98875
No 92
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.4e-38 Score=364.52 Aligned_cols=215 Identities=26% Similarity=0.364 Sum_probs=186.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.++++|+++.++ +..+|+|+||++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p--~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQ--TAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 367888887653 34699999999999999999999999999999999998763 589999999876
Q ss_pred Ch-hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 923 KQ-ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 923 ~~-~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
.. ...+|.+|||+|++.++|.+||+||+.|+...+ .....+.+..++++++.++|.++.+..+ .+||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHH
Confidence 43 223567999999999999999999999986543 2334556678999999999998888764 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.++ |.|+|++|||++ ++...||++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999997 68889999999985 79999998
Q ss_pred CC
Q 001291 1081 LG 1082 (1106)
Q Consensus 1081 ~~ 1082 (1106)
+.
T Consensus 219 ~~ 220 (353)
T TIGR03265 219 PQ 220 (353)
T ss_pred HH
Confidence 65
No 93
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=363.88 Aligned_cols=215 Identities=24% Similarity=0.379 Sum_probs=187.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ +..+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 477888887663 34699999999999999999999999999999999998764 589999999876
Q ss_pred Chh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 923 ~~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
... ..+|.+|||+|++.++|.+||+||+.|+...+. ....+.+++++++++.++|.++.++.. .+||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 542 234679999999999999999999999865432 334556678899999999998877763 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999997 68889999999985 79999998
Q ss_pred CC
Q 001291 1081 LG 1082 (1106)
Q Consensus 1081 ~~ 1082 (1106)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 65
No 94
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.7e-38 Score=356.79 Aligned_cols=206 Identities=27% Similarity=0.397 Sum_probs=179.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999875432 2467999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.|.++..+... .+....++.+++.+||.+.+++.++.
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 138 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVGE---- 138 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchhh----
Confidence 9999998765543210 01123456789999999999998865
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|...++.++||+|++|++|+
T Consensus 139 -LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 -LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred -CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998753 3 5667778899999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 95
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.1e-38 Score=363.40 Aligned_cols=215 Identities=25% Similarity=0.330 Sum_probs=186.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeE--EEEEEcCc
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GDIRISGY 920 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~--G~i~i~g~ 920 (1106)
.+.++|++++++ +..+|+|+||+|++||+++|+|||||||||||++|+|..++ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 477888887763 24699999999999999999999999999999999998764 46 99999998
Q ss_pred cCCh-hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 921 PKKQ-ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 921 ~~~~-~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
+... ...++.+|||+|++.++|.+||+||+.|+...+ .....+.+..++++++.++|.++.++.+ .+||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 7643 123567999999999999999999999986443 2334555667899999999998888764 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999997 57889999999985 79999
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99865
No 96
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.2e-38 Score=359.63 Aligned_cols=216 Identities=25% Similarity=0.372 Sum_probs=185.5
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..+.++|++..++ ++.+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 3588899887763 35699999999999999999999999999999999998764 58999999987
Q ss_pred CCh--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 922 KKQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 922 ~~~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
... ...++.+||++|++.+++.+|+.||+.|.+..+. ....+..+.++++++.++|.+..++.+ .+||+|
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2345679999999999899999999987654432 223334456788999999998877765 369999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||++||+||+.+|++|||||||+|||+.++..++++|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999997 67889999999985 7999999
Q ss_pred cCC
Q 001291 1080 PLG 1082 (1106)
Q Consensus 1080 ~~~ 1082 (1106)
++.
T Consensus 255 ~~~ 257 (340)
T PRK13536 255 RPH 257 (340)
T ss_pred CHH
Confidence 764
No 97
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.6e-36 Score=394.13 Aligned_cols=216 Identities=23% Similarity=0.356 Sum_probs=185.0
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++++|+++.++. +++.+|+|+||++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 36888898876631 235699999999999999999999999999999999998764 58999999988
Q ss_pred CCh--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 922 KKQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 922 ~~~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.++.++++++.++|.+..++.+ .+||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999998765542 223344567899999999998887764 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|||||+||+||+.+|+||||||||+|||+.+++.++++|++++ +|+|||++||+++ ++...|||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999985 6999999999997 57778999999985 7899988
Q ss_pred cC
Q 001291 1080 PL 1081 (1106)
Q Consensus 1080 ~~ 1081 (1106)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 64
No 98
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.4e-38 Score=361.31 Aligned_cols=210 Identities=25% Similarity=0.379 Sum_probs=180.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|+++....+ ++.++||+|++.+++++||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999998 9999999998865433 3679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.|+.+....... . ...+....++.+++.+||++..|+.+.+
T Consensus 92 ~eni~~~~~~~~~~~~------~------------------------~~~~~~~~~~~~l~~~~L~~~~~~~~~~----- 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------P------------------------NAAAIKAKVTQLLEMVQLAHLADRYPAQ----- 136 (353)
T ss_pred HHHHHhhhhhcccccC------C------------------------CHHHHHHHHHHHHHHcCCchhhhCChhh-----
Confidence 9999998653210000 0 0011233567889999999888888765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+ ..+.+++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998765 3355677789999999999999999999999
Q ss_pred EEEcCHHHHH
Q 001291 404 VYQGPRELVL 413 (1106)
Q Consensus 404 v~~G~~~~~~ 413 (1106)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999999885
No 99
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=8.5e-39 Score=313.51 Aligned_cols=213 Identities=26% Similarity=0.330 Sum_probs=181.5
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+..++|+|+|..- =-..+++|++||++||+||||||||||+++|+|...+ .+|.|+|+|.+..
T Consensus 2 l~L~~V~~~y~~~---------------~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t 64 (231)
T COG3840 2 LALDDVRFSYGHL---------------PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHT 64 (231)
T ss_pred ccccceEEeeCcc---------------eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecC
Confidence 3456777776532 1256789999999999999999999999999998774 4899999999875
Q ss_pred hh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 924 QE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 924 ~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
.. ...|-++.++|+..++..+||.+|+.++....+ .-....++.++.++..+||..+.+++. .+|||||||
T Consensus 65 ~~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~L---kL~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQ 136 (231)
T COG3840 65 ASPPAERPVSMLFQENNLFAHLTVAQNIGLGLSPGL---KLNAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQ 136 (231)
T ss_pred cCCcccCChhhhhhccccchhhhhhhhhcccCCccc---ccCHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHH
Confidence 43 345668999999999999999999988753221 223456677999999999999988874 369999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
|++|||+|+++-+||+||||+|+|||.-+..+..++.++++ ++.|+++|||+|+ |....+|+++++.+ |++.+.|+.
T Consensus 137 RvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 137 RVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999999999999999999999999999999999975 5899999999998 78999999999986 799999986
Q ss_pred CC
Q 001291 1082 GH 1083 (1106)
Q Consensus 1082 ~~ 1083 (1106)
.+
T Consensus 215 ~~ 216 (231)
T COG3840 215 QE 216 (231)
T ss_pred HH
Confidence 53
No 100
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.8e-37 Score=376.71 Aligned_cols=216 Identities=28% Similarity=0.427 Sum_probs=178.6
Q ss_pred CCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcC
Q 001291 840 EPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISG 919 (1106)
Q Consensus 840 ~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g 919 (1106)
-+..++|+||+|.|+. ++..+|+|+|++|+|||.+||+|+||||||||+|+|+|..++ ..|.|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p--~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP--QQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECC
Confidence 3457999999999863 223699999999999999999999999999999999998774 589999999
Q ss_pred ccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccC
Q 001291 920 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVG 989 (1106)
Q Consensus 920 ~~~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~ 989 (1106)
+++.+ ..+|+.+|||+|++.++ .-|++||+.++. ++.+ .+.+.+++...+..+.. +..++
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~-----p~~~----~e~i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGN-----PEAT----DEEIIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCC-----CCCC----HHHHHHHHHHhCcHHHHHhcccccccccc
Confidence 99754 56788999999999876 479999998763 2222 22345555555554432 33344
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEE
Q 001291 990 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1106)
Q Consensus 990 ~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l 1069 (1106)
..| .+||||||||++|||||+++|+||+||||||+||+++++.|++.|.+.. .|+|+|+++|+++ ..+.||+|++|
T Consensus 605 E~G-~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl 680 (709)
T COG2274 605 EGG-ANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVL 680 (709)
T ss_pred cCC-CCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEc
Confidence 434 4699999999999999999999999999999999999999999999985 5899999999986 57899999999
Q ss_pred ecCCEEEEEecCCC
Q 001291 1070 KRGGREVYVGPLGH 1083 (1106)
Q Consensus 1070 ~~gG~~~~~G~~~~ 1083 (1106)
+ +|+++..|+..+
T Consensus 681 ~-~Gkiv~~gs~~e 693 (709)
T COG2274 681 D-QGKIVEQGSHEE 693 (709)
T ss_pred c-CCceeccCCHHH
Confidence 7 579999998543
No 101
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.2e-38 Score=315.47 Aligned_cols=201 Identities=26% Similarity=0.395 Sum_probs=179.1
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDN 236 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~ 236 (1106)
....+|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++.... .+|+||+|+|+..
T Consensus 13 ~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~r 89 (223)
T COG2884 13 GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFR 89 (223)
T ss_pred CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecc
Confidence 3356999999999999999999999999999999999999998 999999999986543 2589999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
++++.||.||++|+.+..|.. ..+.+.++.++|+..||.+.++...
T Consensus 90 LL~~~tvyeNVA~pL~v~G~~----------------------------------~~~i~~rV~~~L~~VgL~~k~~~lP 135 (223)
T COG2884 90 LLPDRTVYENVALPLRVIGKP----------------------------------PREIRRRVSEVLDLVGLKHKARALP 135 (223)
T ss_pred ccccchHhhhhhhhhhccCCC----------------------------------HHHHHHHHHHHHHHhccchhhhcCc
Confidence 999999999999998876642 1234567888999999999998776
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
-. |||||||||+||||++.+|++|+-||||-.||+..+.+|++++.++.+ .+|+|++.+|+..-+..+-.+++
T Consensus 136 ~~-----LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl 208 (223)
T COG2884 136 SQ-----LSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVL 208 (223)
T ss_pred cc-----cCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEE
Confidence 54 999999999999999999999999999999999999999999998754 46777788999998888999999
Q ss_pred EecCCeEEEEc
Q 001291 397 LLSDGQIVYQG 407 (1106)
Q Consensus 397 lL~~G~iv~~G 407 (1106)
.|++|+++...
T Consensus 209 ~l~~Grl~~d~ 219 (223)
T COG2884 209 ALEDGRLVRDE 219 (223)
T ss_pred EEeCCEEEecc
Confidence 99999998754
No 102
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-38 Score=339.61 Aligned_cols=200 Identities=28% Similarity=0.404 Sum_probs=171.4
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYE 948 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~tv~e 948 (1106)
+++|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+... .++.++|++|++.+++..|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 4699999999999999999999999999999999998653 58999999987642 3467999999998888899999
Q ss_pred HHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCH
Q 001291 949 SLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1106)
Q Consensus 949 ~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~ 1028 (1106)
|+.+....+. ...+...+.++++++.+++.+..++.+ .+||||||||++|||||+.+|++|||||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9987654331 223334566889999999987766653 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEec-CCEEEEEecC
Q 001291 1029 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGREVYVGPL 1081 (1106)
Q Consensus 1029 ~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~-gG~~~~~G~~ 1081 (1106)
.++..+++.|+++.+ .|+|||++||+++ ++.+.||++++|++ .|++++.+++
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999864 4899999999987 47788999999985 4899988765
No 103
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-38 Score=339.56 Aligned_cols=210 Identities=29% Similarity=0.409 Sum_probs=174.7
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERP--DSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcCc
Confidence 4567766553 24699999999999999999999999999999999997653 58999999987643
Q ss_pred h-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 001291 925 E-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1106)
Q Consensus 925 ~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqr 1003 (1106)
. ..++.++|++|++.+++.+|++||+.+..... ....+..++.++++++.+++.+..+..+ .+||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLR---GVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 2 23456999999988888899999998764322 1223334456789999999987766653 4699999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1004 l~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
++|||||+.+|++|||||||+|||+.++..+++.|+++++ .|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999987 47788999999985 6777654
No 104
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.3e-38 Score=339.94 Aligned_cols=207 Identities=24% Similarity=0.321 Sum_probs=173.2
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++. +.+.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 467788877631 123699999999999999999999999999999999998653 5899999998753
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. .+++.++|++|++.+++.+|+.||+.+....+. ...+..++.++++++.+++.+..+..+ .+||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 235679999999988888999999988654321 223334556889999999988776653 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
||||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++|||++ .+.+.||++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999777999999999987 467789999999864
No 105
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3e-38 Score=356.74 Aligned_cols=203 Identities=28% Similarity=0.385 Sum_probs=175.9
Q ss_pred ceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCC
Q 001291 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVT 945 (1106)
Q Consensus 868 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~g~v~q~~~~~~~~t 945 (1106)
++.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 45799999999999999999999999999999999998763 58999999987643 234567999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCC
Q 001291 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1106)
Q Consensus 946 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsg 1025 (1106)
|+||+.+.+.++. ......++.++++++.++|.+..++.+ .+|||||||||+||+||+.+|++|||||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999988765432 223344556889999999988777764 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1026 LD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 209 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTPE 209 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 9999999999999999878999999999997 57788999999985 7999988754
No 106
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.1e-38 Score=359.82 Aligned_cols=217 Identities=26% Similarity=0.384 Sum_probs=184.7
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ +..+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 56778876653 34699999999999999999999999999999999998764 5899999998764
Q ss_pred hh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 924 QE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 924 ~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
.. ..++.+|||+|++.+++.+||.||+.|+...+.. .....++.++.+.++++.++|.++.++.+ .+||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987543211 12334455667899999999988877764 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||+|||||+.+|++|||||||+|||+.++..+++.|+++.++ |.|+|++|||++ ++...||++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999997 58889999999985 79999998
Q ss_pred CC
Q 001291 1081 LG 1082 (1106)
Q Consensus 1081 ~~ 1082 (1106)
..
T Consensus 221 ~~ 222 (353)
T PRK10851 221 PD 222 (353)
T ss_pred HH
Confidence 65
No 107
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-38 Score=341.39 Aligned_cols=207 Identities=30% Similarity=0.397 Sum_probs=175.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 36999999999999999999999999999999999999998 999999998875432 245799999999889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++...... ... .+....++.+++.+||++..++.+++
T Consensus 90 ~~~tv~~~l~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (235)
T cd03261 90 DSLTVFENVAFPLREHTR---------LSE------------------------EEIREIVLEKLEAVGLRGAEDLYPAE 136 (235)
T ss_pred CCCcHHHHHHHHHhhccC---------CCH------------------------HHHHHHHHHHHHHcCCchhhcCChhh
Confidence 999999999987532110 000 01123456789999998888887765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.++||+|++|
T Consensus 137 -----LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 137 -----LSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999987643 2456666788889999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 001291 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999988763
No 108
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.9e-38 Score=359.13 Aligned_cols=205 Identities=25% Similarity=0.299 Sum_probs=178.3
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh---cc----cceEEEEccCCC
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE---TF----ARISGYCEQNDI 939 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~g~v~q~~~ 939 (1106)
+++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... .. ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456799999999999999999999999999999999998764 589999999886532 22 567999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001291 940 HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1106)
Q Consensus 940 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illL 1019 (1106)
+++.+||+||+.|+.... ....++..+++.++++.++|.+..+..+ .+|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 2334556677899999999988777764 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1020 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
||||++||+.++..+++.++++.++ |+|||++|||++ ++.+.||++++|++ |+++..|++.+
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~e 216 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPDE 216 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHHH
Confidence 9999999999999999999998754 899999999997 57889999999975 79999997553
No 109
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-38 Score=361.11 Aligned_cols=206 Identities=26% Similarity=0.383 Sum_probs=179.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 35999999999999999999999999999999999999998 9999999998765433 4679999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.|+.+..+.. . .+....++.+++.+||++..++.+++
T Consensus 93 ~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~lgL~~~~~~~~~~----- 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------K------------------------EEINQRVNQVAEVLQLAHLLDRKPKA----- 133 (369)
T ss_pred HHHHHhHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCChhh-----
Confidence 99999986543210 0 01123467789999999888888765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..+||+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999876533 45666788999999999999999999999
Q ss_pred EEEcCHHHHH
Q 001291 404 VYQGPRELVL 413 (1106)
Q Consensus 404 v~~G~~~~~~ 413 (1106)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 110
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-38 Score=326.23 Aligned_cols=205 Identities=26% Similarity=0.329 Sum_probs=177.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC----ccceEEEEcCCC--CCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV----PERTAAYISQHD--NHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~ 238 (1106)
.++|+|||+++.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+||+ .+.
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 37999999999999999999999999999999999999998 999999998775542 346799999996 578
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc-ccccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI-CADTMVG 317 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 317 (1106)
|..||++.|.-+.+..+.+. ...++.++++.+||+. .++...-
T Consensus 97 P~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l~R~P~ 140 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFLDRRPH 140 (252)
T ss_pred cchhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHHhcCch
Confidence 99999999987765433211 1123677899999975 5555554
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
.|||||||||+|||||+.+|++|++|||||+||++...+|++.|.++.+ ..+.+++.++|+..-+..+||||++
T Consensus 141 -----eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~V 214 (252)
T COG1124 141 -----ELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAV 214 (252)
T ss_pred -----hcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheee
Confidence 3999999999999999999999999999999999999999999998865 4567788899999999999999999
Q ss_pred ecCCeEEEEcCHHHHHH
Q 001291 398 LSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1106)
|++|++++.++.+++..
T Consensus 215 m~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 215 MDNGQIVEIGPTEELLS 231 (252)
T ss_pred eeCCeEEEeechhhhhc
Confidence 99999999999999864
No 111
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-38 Score=362.44 Aligned_cols=206 Identities=23% Similarity=0.324 Sum_probs=180.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
..+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|++.+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35999999999999999999999999999999999999998 9999999998865433 4789999999999999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
.||+.|+.+..+.. ..+....++.+++.+||.+..++.+..
T Consensus 109 ~eNi~~~l~~~~~~----------------------------------~~~~~~~v~~~l~~l~L~~~~~~~~~~----- 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------------------------------KAEIASRVNEMLGLVHMQEFAKRKPHQ----- 149 (377)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 99999986543210 011223567889999999888887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+|||||+.+|++||||||+++||..++.++.+.|+++.+.. +.+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999998876544 46667789999999999999999999999
Q ss_pred EEEcCHHHHH
Q 001291 404 VYQGPRELVL 413 (1106)
Q Consensus 404 v~~G~~~~~~ 413 (1106)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999999885
No 112
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-38 Score=327.78 Aligned_cols=217 Identities=27% Similarity=0.356 Sum_probs=176.6
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+..+|++..++... ....+|+||||+|.+||++||+|+||||||||.++|+|...+ ..|+|.++|.+..
T Consensus 4 l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~~ 72 (252)
T COG1124 4 LSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPLA 72 (252)
T ss_pred EEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCcccC
Confidence 56677765554321 112599999999999999999999999999999999998764 5899999997754
Q ss_pred hh----cccceEEEEccCCCC--CCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCC
Q 001291 924 QE----TFARISGYCEQNDIH--SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGL 996 (1106)
Q Consensus 924 ~~----~~~~~~g~v~q~~~~--~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~L 996 (1106)
.. .+++.+.+|+|++.- -|..||++.|.=.... ....+ .++++.++++.+||.+ ..++. +.+|
T Consensus 73 ~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~--~~~~i~~~L~~VgL~~~~l~R~-----P~eL 142 (252)
T COG1124 73 PKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSK--SQQRIAELLDQVGLPPSFLDRR-----PHEL 142 (252)
T ss_pred ccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccH--HHHHHHHHHHHcCCCHHHHhcC-----chhc
Confidence 32 467789999999874 5888999887544322 12222 2333899999999975 33433 4579
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 997 S~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
|||||||+||||||+.+|++|+||||||+||+..++.|++++.++.++ |-|+|+||||++. +...|||+++|++ |++
T Consensus 143 SGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~i 220 (252)
T COG1124 143 SGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQI 220 (252)
T ss_pred ChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-CeE
Confidence 999999999999999999999999999999999999999999999754 7899999999984 7778999999986 799
Q ss_pred EEEecCCC
Q 001291 1076 VYVGPLGH 1083 (1106)
Q Consensus 1076 ~~~G~~~~ 1083 (1106)
++.++.+.
T Consensus 221 vE~~~~~~ 228 (252)
T COG1124 221 VEIGPTEE 228 (252)
T ss_pred EEeechhh
Confidence 99998764
No 113
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7.4e-38 Score=360.07 Aligned_cols=215 Identities=23% Similarity=0.328 Sum_probs=186.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ +..+|+|+||+|++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478888887763 34699999999999999999999999999999999998764 589999999876
Q ss_pred Chh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 923 ~~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
... ..+|.+||++|++.++|.+||+||+.|+...+ .....+.++.++++++.++|.++.++.+ .+||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 432 23467999999999999999999999986433 1234445567899999999998888764 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 999999999997 68889999999985 79999998
Q ss_pred CC
Q 001291 1081 LG 1082 (1106)
Q Consensus 1081 ~~ 1082 (1106)
+.
T Consensus 229 ~~ 230 (375)
T PRK09452 229 PR 230 (375)
T ss_pred HH
Confidence 65
No 114
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.2e-39 Score=320.03 Aligned_cols=208 Identities=26% Similarity=0.351 Sum_probs=182.1
Q ss_pred CCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhc----ccceEEEEccCCCCC
Q 001291 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQET----FARISGYCEQNDIHS 941 (1106)
Q Consensus 866 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~g~v~q~~~~~ 941 (1106)
+++++++++|||.|++||++||+|||||||||.+.++.|...+ .+|.|.++|.++.... .+..+||+||++..+
T Consensus 14 y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 14 YKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred hCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4567899999999999999999999999999999999998764 4899999999876422 233589999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001291 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1106)
Q Consensus 942 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDE 1021 (1106)
..+||+||+..-...+.. +....+++..++++|+.+++.++++.+. ..||||||+|+.|||||+.+|+.++|||
T Consensus 92 r~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDE 165 (243)
T COG1137 92 RKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDE 165 (243)
T ss_pred hcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecC
Confidence 999999999876555431 2233456667889999999999998763 3599999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1022 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
|++|+||-+-..|+++++.++++|..|++|-|+.. +....|||.+++.+ |++...|++.+
T Consensus 166 PFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~e 225 (243)
T COG1137 166 PFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPEE 225 (243)
T ss_pred CccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHHH
Confidence 99999999999999999999999999999999987 68899999999985 79999998754
No 115
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-38 Score=371.37 Aligned_cols=214 Identities=23% Similarity=0.413 Sum_probs=175.3
Q ss_pred CCCccccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCC
Q 001291 158 LPSTKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
||.+ ++.+||+|+|++|+|||.|||+|||||||||+.++|..+++|+ +|+|++||+|+.+.++ ++.||+|.|+
T Consensus 475 YP~R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QE 550 (716)
T KOG0058|consen 475 YPTR-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQE 550 (716)
T ss_pred cCCC-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeecc
Confidence 3444 4578999999999999999999999999999999999999998 9999999999988776 5889999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccc
Q 001291 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
|.+|. -||+|||.|+... .+.+..+.++.. .+.-=-+.++++..||
T Consensus 551 PvLFs-~sI~eNI~YG~~~-------------------------~t~e~i~~AAk~--------ANah~FI~~~p~gY~T 596 (716)
T KOG0058|consen 551 PVLFS-GSIRENIAYGLDN-------------------------ATDEEIEAAAKM--------ANAHEFITNFPDGYNT 596 (716)
T ss_pred ceeec-ccHHHHHhcCCCC-------------------------CCHHHHHHHHHH--------hChHHHHHhCcccccc
Confidence 98886 5999999998641 111111111111 1111124578999999
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.||+ .+..||||||||++|||||+.+|.||||||.||+||+.+...+.+.|.++.+ ++|+++ |.|. -.+.+.+|+
T Consensus 597 ~VGE-kG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAHR-LSTV~~Ad~ 671 (716)
T KOG0058|consen 597 VVGE-KGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAHR-LSTVRHADQ 671 (716)
T ss_pred ccCC-ccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eehh-hhHhhhccE
Confidence 9997 3445999999999999999999999999999999999999999999987643 455544 5554 457789999
Q ss_pred EEEecCCeEEEEcCHHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~ 414 (1106)
|+++++|++++.|+++|+++
T Consensus 672 Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 672 IVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEEcCCeEEecccHHHHhh
Confidence 99999999999999999975
No 116
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.4e-38 Score=337.70 Aligned_cols=212 Identities=28% Similarity=0.384 Sum_probs=177.9
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCc
Confidence 4667776653 34699999999999999999999999999999999998653 58999999976532
Q ss_pred --hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 925 --~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
...++.++|++|++.+++.+|++||+.+....+. ...+..++.++++++.+++.+..+..+ .+|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 2234579999999988888999999988654331 223334556889999999987766654 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
|++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999999876 899999999997 57788999999985 788888764
No 117
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-38 Score=329.06 Aligned_cols=221 Identities=28% Similarity=0.378 Sum_probs=190.2
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCcc----ceEEEEcCCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHI 238 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1106)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|.+++...+. .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4567999999999999999999999999999999999999998 99999999999887664 4578899999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
++|||.||+..++..+.. +....... ....+..+...++..+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~~-------------------~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGRP-------------------RARKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhccc-------------------cchhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999998765421 00000000 00012233456778899999999999999987
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+ .++.+|+.|.|+..-++.+||||+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999864 45688888999999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 001291 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 118
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=356.29 Aligned_cols=206 Identities=26% Similarity=0.379 Sum_probs=178.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc------cceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999998 9999999998765322 35799999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.|+....+.. . .+....++.+++.+||++..++.+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~ 140 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTP----------K------------------------AEIKARVTELLELVGLSDKADRYPAQ 140 (343)
T ss_pred CCCcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCChhh
Confidence 9999999999976543210 0 01123467789999999888887765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||+|++|
T Consensus 141 -----LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999987653 3456667888999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 001291 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 119
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=357.06 Aligned_cols=218 Identities=23% Similarity=0.296 Sum_probs=182.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++++++.. ..++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5678888776411 1135799999999999999999999999999999999998763 5899999998764
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. ..++.+||++|++.+++.+||.||+.+....+ ....+..++.++++++.++|.+..+..+ .+||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELA---GTPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 21 23567999999999888899999998875433 1233444567889999999988777653 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999997 57788999999985 7899
Q ss_pred EEecCC
Q 001291 1077 YVGPLG 1082 (1106)
Q Consensus 1077 ~~G~~~ 1082 (1106)
+.|+..
T Consensus 221 ~~g~~~ 226 (343)
T PRK11153 221 EQGTVS 226 (343)
T ss_pred EEcCHH
Confidence 988754
No 120
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-37 Score=334.00 Aligned_cols=209 Identities=26% Similarity=0.426 Sum_probs=175.4
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILP--DSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCCchhH
Confidence 4667776553 34699999999999999999999999999999999997653 58999999987643
Q ss_pred hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHH
Q 001291 925 ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRL 1004 (1106)
Q Consensus 925 ~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl 1004 (1106)
..++.++|++|++.+++.+|++||+.+....+. ......++.+.++++.+++.+..+..+ .+||+|||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHH
Confidence 335679999999988888999999987654331 223334556889999999987666553 46999999999
Q ss_pred HHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1005 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1005 ~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
+||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998877899999999987 46778999999985 6777654
No 121
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.2e-37 Score=351.90 Aligned_cols=215 Identities=27% Similarity=0.365 Sum_probs=181.5
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ +..+|+||||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 467888887663 34699999999999999999999999999999999997653 489999999875
Q ss_pred Ch--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 001291 923 KQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 923 ~~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gq 1000 (1106)
.. ...++.+||++|++.+++.+|++||+.+.+..+. ...+.....++++++.+++.+..+..+ .+|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2235679999999988888999999986543321 223334456788999999988777664 4699999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999997 57788999999985 78999887
Q ss_pred CC
Q 001291 1081 LG 1082 (1106)
Q Consensus 1081 ~~ 1082 (1106)
..
T Consensus 219 ~~ 220 (303)
T TIGR01288 219 PH 220 (303)
T ss_pred HH
Confidence 54
No 122
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=7.5e-38 Score=353.54 Aligned_cols=206 Identities=27% Similarity=0.381 Sum_probs=178.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999998875421 1457999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.|.+++.+... .+....++.+++.+||++..++.++.
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 124 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVGT---- 124 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchhh----
Confidence 9999998765543200 01123467789999999988888876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++.+ . +++|+.++|...++.++||+|++|++|+
T Consensus 125 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 125 -YSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998754 3 4566778899999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+++.|+++++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999998764
No 123
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.2e-37 Score=334.74 Aligned_cols=210 Identities=26% Similarity=0.393 Sum_probs=175.4
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++++|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCc
Confidence 4677776653 24699999999999999999999999999999999998653 58999999987643
Q ss_pred h-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 001291 925 E-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1106)
Q Consensus 925 ~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqr 1003 (1106)
. ..++.++|++|++.+++..|++||+.+....+ ....++.++.++++++.+++.+..+..+ .+||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLR---KVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 2 12356999999998888899999998764332 1223344556788999999987777654 4699999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1004 l~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998764 899999999987 57788999999985 7888765
No 124
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-37 Score=360.29 Aligned_cols=218 Identities=27% Similarity=0.362 Sum_probs=184.7
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.|+ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEcC
Confidence 67788877653 35799999999999999999999999999999999998763 5899999998764
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ...++.+||++|++.+++.+||+||+.++...+.. .....+..++.++++++.+++.++.++.+ .+||+|
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 3 34567799999999888889999999886432211 11112344567899999999998887764 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||+.|||||+++|+||||||||+|||+.++..++++|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G 221 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999877999999999998 57789999999985 7899999
Q ss_pred cCCC
Q 001291 1080 PLGH 1083 (1106)
Q Consensus 1080 ~~~~ 1083 (1106)
++.+
T Consensus 222 ~~~e 225 (402)
T PRK09536 222 PPAD 225 (402)
T ss_pred CHHH
Confidence 8653
No 125
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-38 Score=385.66 Aligned_cols=218 Identities=30% Similarity=0.424 Sum_probs=179.7
Q ss_pred CCCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEc
Q 001291 839 FEPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRIS 918 (1106)
Q Consensus 839 ~~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~ 918 (1106)
.....++|+||+|+||..+ +..+|+|+||.|++|+.+||+|||||||||++.+|.+... |.+|+|.||
T Consensus 346 ~~~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~id 413 (1228)
T KOG0055|consen 346 SIKGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLID 413 (1228)
T ss_pred ccccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEc
Confidence 3445799999999998753 4579999999999999999999999999999999999876 468999999
Q ss_pred CccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-------ccccccc
Q 001291 919 GYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-------PLRQSLV 988 (1106)
Q Consensus 919 g~~~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-------~~~~~~~ 988 (1106)
|.+++. ..++.++|.|.|+|.++ ..|++||+.|+. ++. .++.++++.+..+.. +-.+..+
T Consensus 414 G~di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~-----~da----t~~~i~~a~k~ana~~fi~~lp~g~~T~v 483 (1228)
T KOG0055|consen 414 GEDIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGK-----PDA----TREEIEEAAKAANAHDFILKLPDGYDTLV 483 (1228)
T ss_pred CccchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCC-----Ccc----cHHHHHHHHHHccHHHHHHhhHHhhcccc
Confidence 998754 45677899999999765 589999999873 121 122344555444433 3345556
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEE
Q 001291 989 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1068 (1106)
Q Consensus 989 ~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~ 1068 (1106)
|..|+ +||||||||++|||||+++|+|||||||||+||+++++.|+++|++.. .|+|.|+|+|++|. + +.+|++++
T Consensus 484 ge~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLSt-I-rnaD~I~v 559 (1228)
T KOG0055|consen 484 GERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLST-I-RNADKIAV 559 (1228)
T ss_pred cCCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehhh-h-hccCEEEE
Confidence 66665 499999999999999999999999999999999999999999998864 69999999999983 4 56999999
Q ss_pred EecCCEEEEEecCCC
Q 001291 1069 MKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1069 l~~gG~~~~~G~~~~ 1083 (1106)
|++ |++++.|...+
T Consensus 560 ~~~-G~IvE~G~h~E 573 (1228)
T KOG0055|consen 560 MEE-GKIVEQGTHDE 573 (1228)
T ss_pred EEC-CEEEEecCHHH
Confidence 986 79999998543
No 126
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-38 Score=322.63 Aligned_cols=207 Identities=25% Similarity=0.382 Sum_probs=175.8
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCcc----ceEEEEcCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHIG 239 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1106)
+.++|++||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.+++...+. +-++||||....|+
T Consensus 15 ~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 15 KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 367999999999999999999999999999999999999987 99999999999877653 56999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHc-CCcccccccccC
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVL-GLDICADTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~ 318 (1106)
.|||+|||..++..... .. . .....+.+.+.| .|..-.+..-|.
T Consensus 92 ~LTVeENL~~g~~~~~~-~~----------~------------------------~~~~~e~v~~lFP~Lker~~~~aG~ 136 (237)
T COG0410 92 RLTVEENLLLGAYARRD-KE----------A------------------------QERDLEEVYELFPRLKERRNQRAGT 136 (237)
T ss_pred hCcHHHHHhhhhhcccc-cc----------c------------------------ccccHHHHHHHChhHHHHhcCcccC
Confidence 99999999988643310 00 0 000023344444 355555666665
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||+|.++|||||+++|++|+|||||.||-|.-..+|.+.++++.+. ++.+|+.+.|....+.+++|+.++|
T Consensus 137 -----LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvl 210 (237)
T COG0410 137 -----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVL 210 (237)
T ss_pred -----CChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEE
Confidence 9999999999999999999999999999999999999999999998653 4577888999999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 001291 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
.+|+|++.|+.+++..
T Consensus 211 e~Griv~~G~~~eL~~ 226 (237)
T COG0410 211 ENGRIVLSGTAAELLA 226 (237)
T ss_pred eCCEEEEecCHHHHhc
Confidence 9999999999998864
No 127
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=359.23 Aligned_cols=214 Identities=26% Similarity=0.360 Sum_probs=183.2
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 4 l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i~ 68 (369)
T PRK11000 4 VTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRMN 68 (369)
T ss_pred EEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 67788877653 34699999999999999999999999999999999998763 5899999998764
Q ss_pred hh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 924 QE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 924 ~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
.. ..++.+||++|++.+++.+||+||+.|+...+. ...++.++.++++++.++|.+..++.+ .+|||||||
T Consensus 69 ~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~Q 140 (369)
T PRK11000 69 DVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQ 140 (369)
T ss_pred CCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHH
Confidence 31 234679999999999999999999998764331 233445567899999999988777664 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
||+|||||+.+|++|||||||+|||+.++..+++.|+++.++ |.|||++|||++ ++...||++++|++ |+++..|++
T Consensus 141 RvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~ 218 (369)
T PRK11000 141 RVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKP 218 (369)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999998764 899999999997 57889999999985 799999976
Q ss_pred C
Q 001291 1082 G 1082 (1106)
Q Consensus 1082 ~ 1082 (1106)
.
T Consensus 219 ~ 219 (369)
T PRK11000 219 L 219 (369)
T ss_pred H
Confidence 5
No 128
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=357.07 Aligned_cols=216 Identities=24% Similarity=0.359 Sum_probs=186.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.++++|++..++ +..+|+|+||+|++||+++|+|||||||||||++|+|..++ ..|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478888887653 34699999999999999999999999999999999998764 589999999876
Q ss_pred Ch-hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 923 KQ-ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 923 ~~-~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
.. ...+|.+||++|++.++|.+||.||+.|+...+ .....+.++++.++++.++|.++.+..+ .+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 43 234578999999999999999999999976433 2234555667899999999998877764 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||+|||||+.+|++|||||||++||+.++..+.+.|+++.+ .|.|+|++|||++ ++...+|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999997 68899999999985 79999998
Q ss_pred CCC
Q 001291 1081 LGH 1083 (1106)
Q Consensus 1081 ~~~ 1083 (1106)
+.+
T Consensus 234 ~~~ 236 (377)
T PRK11607 234 PEE 236 (377)
T ss_pred HHH
Confidence 653
No 129
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.2e-37 Score=336.19 Aligned_cols=215 Identities=28% Similarity=0.422 Sum_probs=177.8
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++.. ....++|+|+||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 4567777766421 0112699999999999999999999999999999999998653 4899999998764
Q ss_pred h--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 924 Q--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 924 ~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
. ..+++.+||++|++.+++.+|+.||+.+....+ ........+.++++++.+++.+..++.+ .+||+|||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLY---GLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 234567999999998888899999998765432 1223344567889999999987777654 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999987 57788999999985 6777653
No 130
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.8e-37 Score=338.86 Aligned_cols=215 Identities=27% Similarity=0.350 Sum_probs=177.5
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ +.++|+|+||+|++|+++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRP--TSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEECCC
Confidence 4567776553 34699999999999999999999999999999999998653 58999999987643
Q ss_pred h---c-ccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCC-------CChHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 001291 925 E---T-FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPE-------VNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1106)
Q Consensus 925 ~---~-~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~-------~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~ 993 (1106)
. . .++.++|++|++.+++.+||+||+.+......... .........+.++++.+++.+..+..+
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 1 1 23468999999998888999999988654321110 012334456889999999987766653
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
.+||||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 469999999999999999999999999999999999999999999998877999999999997 57788999999985 7
Q ss_pred EEEEEecC
Q 001291 1074 REVYVGPL 1081 (1106)
Q Consensus 1074 ~~~~~G~~ 1081 (1106)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 89888764
No 131
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=347.74 Aligned_cols=219 Identities=21% Similarity=0.299 Sum_probs=179.8
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.+++|++.++... ...+++|+||||+|++||++||+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 67888888764210 0124699999999999999999999999999999999998763 5899999998764
Q ss_pred h-----hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC--cccccccCCCCCCC
Q 001291 924 Q-----ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK--PLRQSLVGLPGVNG 995 (1106)
Q Consensus 924 ~-----~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~--~~~~~~~~~~g~~~ 995 (1106)
. ...++.+||++|++. .....||+||+.|+.... ....++..+.++++++.++|. +..+..+ ..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSP-----FE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCc-----cc
Confidence 3 134567999999874 234579999998865332 234455556789999999996 5555543 46
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 996 LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
||||||||++|||||+.+|++|||||||+|||+.++..++++|++++++ |+|||++|||++ ++.+.||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999987 46788999999985 79
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (287)
T PRK13637 223 CELQGTPR 230 (287)
T ss_pred EEEECCHH
Confidence 99988754
No 132
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.4e-37 Score=351.29 Aligned_cols=206 Identities=27% Similarity=0.387 Sum_probs=178.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+||++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999998 999999999875432 2467999999998999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.|.....+... .+....++.+++.+||++..++.+++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~~---- 172 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVSD---- 172 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChhh----
Confidence 9999998654432100 00112356678999999989988876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++.++++.|+++.. . +++|+.++|...++.++||+|++|++|+
T Consensus 173 -LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 173 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998854 3 5567778899999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
++++|+++++..
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 133
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-37 Score=337.91 Aligned_cols=218 Identities=28% Similarity=0.389 Sum_probs=179.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 2 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 66 (239)
T cd03296 2 SIEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDA 66 (239)
T ss_pred EEEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 367788887663 24699999999999999999999999999999999998653 589999999875
Q ss_pred Chh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCC-CCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 001291 923 KQE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP-EVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 923 ~~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gq 1000 (1106)
... ..++.++|++|++.+++..||.||+.++...+... ........+.++++++.+++.+..+..+ .+||+||
T Consensus 67 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 141 (239)
T cd03296 67 TDVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQ 141 (239)
T ss_pred CcCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHH
Confidence 432 12356999999998888899999998764332110 0122233456788999999987766653 4699999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 142 ~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 219 (239)
T cd03296 142 RQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVG 219 (239)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEec
Confidence 99999999999999999999999999999999999999999765 899999999987 47788999999975 7899988
Q ss_pred cCC
Q 001291 1080 PLG 1082 (1106)
Q Consensus 1080 ~~~ 1082 (1106)
+..
T Consensus 220 ~~~ 222 (239)
T cd03296 220 TPD 222 (239)
T ss_pred CHH
Confidence 754
No 134
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.8e-37 Score=336.86 Aligned_cols=214 Identities=24% Similarity=0.287 Sum_probs=175.4
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCC-----CCceeEEEEEEcC
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGDIRISG 919 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~-----~~~~~~G~i~i~g 919 (1106)
.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|.. + +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 4567766553 246999999999999999999999999999999999976 4 4589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.+... ..+++.+||++|++.++ .+||+||+.+....+. .......++.++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87532 22356799999998877 7899999987654321 11122234567899999999876555420 24
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||||||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ +|||++||+++ ++.+.||++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 69999999999999999999999999999999999999999999999876 99999999987 47788999999985 78
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 218 i~~~g~~~ 225 (227)
T cd03260 218 LVEFGPTE 225 (227)
T ss_pred EEEecCcc
Confidence 99988753
No 135
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.1e-37 Score=337.43 Aligned_cols=213 Identities=26% Similarity=0.356 Sum_probs=178.0
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++.+|+|+||++++|++++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 4667776653 34699999999999999999999999999999999998653 57999999987532
Q ss_pred h---c-ccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 001291 925 E---T-FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 925 ~---~-~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gq 1000 (1106)
. . .++.++|++|++.+++.+|++||+.+....+. .........++++++.+++.+..+..+ ..||+||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHH
Confidence 1 1 23468999999988888999999987643321 222334456788999999987666653 4699999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
|||++|||||+.+|++|+|||||+|||+.+++.+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999998877999999999997 57889999999985 78998887
Q ss_pred CC
Q 001291 1081 LG 1082 (1106)
Q Consensus 1081 ~~ 1082 (1106)
..
T Consensus 217 ~~ 218 (232)
T cd03218 217 PE 218 (232)
T ss_pred HH
Confidence 64
No 136
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.1e-37 Score=332.93 Aligned_cols=192 Identities=29% Similarity=0.387 Sum_probs=162.5
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCC-CCCCCCHH
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDI-HSPFVTVY 947 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~-~~~~~tv~ 947 (1106)
+.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+......++.+||++|++. .....|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKE--SSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 4699999999999999999999999999999999998653 58999999987644344567999999974 23457999
Q ss_pred HHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCC
Q 001291 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1027 (1106)
Q Consensus 948 e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD 1027 (1106)
||+.+..... . . ....+.++++.+++.+..+..+ .+||+|||||++|||||+.+|++|||||||+|||
T Consensus 91 e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL---D--A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc---C--c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 1 1245789999999988777664 4699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 1028 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 1028 ~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999997 46778999999985 5653
No 137
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.9e-37 Score=331.96 Aligned_cols=206 Identities=29% Similarity=0.397 Sum_probs=173.3
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
+++|+++.++ ++++|+|+||++++|++++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKP--DSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCCcccc
Confidence 4667776553 24699999999999999999999999999999999998653 58999999987643
Q ss_pred -hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 001291 925 -ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1106)
Q Consensus 925 -~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqr 1003 (1106)
...++.++|++|++.+++..|+.||+.+....+. . .+..++++++.+++.+..+..+ .+||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2334579999999988888999999987653321 1 1345788999999987776653 4699999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1004 l~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
++|||||+.+|++|+|||||+|||+.+++.+++.|+++.++|+|||++|||++ ++.+.||++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877999999999987 46778999999985 6887754
No 138
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.8e-37 Score=334.74 Aligned_cols=207 Identities=29% Similarity=0.402 Sum_probs=170.5
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++.. ...+.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP--TSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCC--CceeEEECCEehhh
Confidence 467777665310 0014699999999999999999999999999999999998653 58999999987542
Q ss_pred hc-------ccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 925 ET-------FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 925 ~~-------~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. .++.++|++|++.+++.+|++||+.+....+. ......++.++++++.+++.+..+..+ .+||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcC
Confidence 11 23579999999988888999999988754331 222334456889999999987766653 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++ +.||++++|++|
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~G 216 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRDG 216 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeCC
Confidence 9999999999999999999999999999999999999999999976 5899999999987 35 489999999864
No 139
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.4e-38 Score=322.22 Aligned_cols=224 Identities=23% Similarity=0.340 Sum_probs=198.0
Q ss_pred CCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCC
Q 001291 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVT 945 (1106)
Q Consensus 866 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~t 945 (1106)
.+++.+++||||.++||+++|++|+|||||||++++|.|...+ .+|.|.++|.+.++.. +.+|||.|.+.-+++.+|
T Consensus 12 Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 12 FGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMT 88 (300)
T ss_pred cCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcchhhhh-hhhcccChhhhccCccCc
Confidence 4667899999999999999999999999999999999998774 5899999999987643 456899999999999999
Q ss_pred HHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCC
Q 001291 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1106)
Q Consensus 946 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsg 1025 (1106)
|.|.+.|.+.+. .++.++.+..++.+|+.+++.....+++ .+||-|++|++.+-.+++++|++++||||+||
T Consensus 89 v~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlILDEPFSG 160 (300)
T COG4152 89 VEDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLILDEPFSG 160 (300)
T ss_pred HHHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEecCCccC
Confidence 999999998876 4567778888999999999998888775 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCc------------hhHHHHHHH
Q 001291 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHH------------SCHLISYFE 1093 (1106)
Q Consensus 1026 LD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~------------~~~~~~yf~ 1093 (1106)
|||.+.+.+.+.+.+++++|.|||++||+++ .+.++||++++|++ |+.|..|++..- +..-.+-..
T Consensus 161 LDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~~ir~~~Gkk~~~ies~~s~eeL~ 238 (300)
T COG4152 161 LDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVEDIRRSFGKKRLVIESDLSLEELA 238 (300)
T ss_pred CChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHHHHHHhcCCceEEEeccCchHHHh
Confidence 9999999999999999999999999999998 68999999999985 788888986531 112234588
Q ss_pred hCCCCcccc
Q 001291 1094 VCPDAHFHI 1102 (1106)
Q Consensus 1094 ~~~g~~~~~ 1102 (1106)
.+|||-+..
T Consensus 239 ~ipgi~~~~ 247 (300)
T COG4152 239 NIPGILKIT 247 (300)
T ss_pred cCCCceeee
Confidence 999998754
No 140
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.8e-37 Score=348.46 Aligned_cols=214 Identities=24% Similarity=0.369 Sum_probs=182.6
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++++++.++ ++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~--~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPP--DSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 56777776653 34699999999999999999999999999999999998663 5899999998764
Q ss_pred h--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 924 Q--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 924 ~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
. ...++.+||++|++.+++.+|+.||+.|.+.++. ...++..+.++++++.++|.+..++.+ ..||+|||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999998899999999988765432 223344556889999999998877764 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
||++||+||+.+|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999997 58889999999985 799998886
Q ss_pred CC
Q 001291 1082 GH 1083 (1106)
Q Consensus 1082 ~~ 1083 (1106)
.+
T Consensus 217 ~~ 218 (301)
T TIGR03522 217 DE 218 (301)
T ss_pred HH
Confidence 53
No 141
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-38 Score=325.52 Aligned_cols=209 Identities=27% Similarity=0.367 Sum_probs=181.3
Q ss_pred CCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhc----ccceEEEEccCCCCC
Q 001291 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQET----FARISGYCEQNDIHS 941 (1106)
Q Consensus 866 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~g~v~q~~~~~ 941 (1106)
.++..+++||||++++||++||+||||||||||+|+|+|..++ ..|.|.++|.++.... .+..++..+|...++
T Consensus 14 FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 14 FGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred cCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4678899999999999999999999999999999999998774 5899999999875422 234578889999999
Q ss_pred CCCCHHHHHHHhhhhcC--------CC-CCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhc
Q 001291 942 PFVTVYESLFYSAWLRL--------PP-EVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVA 1012 (1106)
Q Consensus 942 ~~~tv~e~l~~~~~~~~--------~~-~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~ 1012 (1106)
+.+||.||++.++..+. +. ....++..+++.++|+.++|.+.++.+.+ +||+||||||.|||||+.
T Consensus 92 ~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~ 166 (250)
T COG0411 92 PGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALAT 166 (250)
T ss_pred CCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhc
Confidence 99999999988754321 11 11234556778899999999999998864 599999999999999999
Q ss_pred CCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1013 NPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1013 ~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
+|++|+||||.+||.+.....+.+.|+++.+ .|.||++|.||++. ++.+||||++|+. |+++..|++.+
T Consensus 167 ~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~e 236 (250)
T COG0411 167 QPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPEE 236 (250)
T ss_pred CCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHHH
Confidence 9999999999999999999999999999987 47999999999995 8999999999985 79999999875
No 142
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-37 Score=337.20 Aligned_cols=217 Identities=25% Similarity=0.308 Sum_probs=179.0
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++.. .+..++|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 4567777665310 0112699999999999999999999999999999999998763 5899999998764
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. ..++.++|++|++.+++.+|+.||+.+....+. .........++++++.+++.+..+..+ .+||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCC
Confidence 21 224679999999988888999999987654331 223344556889999999987766653 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
+|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999987 47788999999975 7899
Q ss_pred EEecC
Q 001291 1077 YVGPL 1081 (1106)
Q Consensus 1077 ~~G~~ 1081 (1106)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88764
No 143
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-37 Score=343.67 Aligned_cols=205 Identities=26% Similarity=0.312 Sum_probs=173.2
Q ss_pred CCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh---c----ccceEEEEccCC
Q 001291 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE---T----FARISGYCEQND 938 (1106)
Q Consensus 866 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~g~v~q~~ 938 (1106)
+++..+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+.... . .++.+||++|++
T Consensus 34 ~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 34 TGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred cCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 4556799999999999999999999999999999999998763 489999999875421 1 134699999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEE
Q 001291 939 IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIF 1018 (1106)
Q Consensus 939 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~ill 1018 (1106)
.+++.+|+.||+.+..... ........+.+.++++.++|.+..+..+ .+||+|||||++|||||+.+|+|||
T Consensus 112 ~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~ill 183 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQ---GVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILL 183 (269)
T ss_pred ccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 8888899999998864332 1223334456789999999987777664 4699999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1019 MDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1019 LDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 184 LDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 246 (269)
T cd03294 184 MDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTPE 246 (269)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 99999999999999999999998754 899999999987 47788999999975 7899988754
No 144
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-37 Score=338.98 Aligned_cols=205 Identities=29% Similarity=0.341 Sum_probs=170.0
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh------hcccceEEEEccCCCCCC
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ------ETFARISGYCEQNDIHSP 942 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~g~v~q~~~~~~ 942 (1106)
+.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 4699999999999999999999999999999999998653 47999999987542 123467999999998888
Q ss_pred CCCHHHHHHHhhhhcC-----CCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeE
Q 001291 943 FVTVYESLFYSAWLRL-----PPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSII 1017 (1106)
Q Consensus 943 ~~tv~e~l~~~~~~~~-----~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~il 1017 (1106)
.+||+||+.+...... ..........+.+.++++.+++.+..+..+ .+||+|||||++|||||+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA-----DQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8999999987532110 001112233456788999999987666553 469999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1018 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1018 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
||||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 230 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPPA 230 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCHH
Confidence 999999999999999999999998764 899999999997 47779999999985 7899988754
No 145
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-36 Score=350.33 Aligned_cols=217 Identities=26% Similarity=0.418 Sum_probs=183.1
Q ss_pred CCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcC
Q 001291 840 EPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISG 919 (1106)
Q Consensus 840 ~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g 919 (1106)
.+..+..+|++|.++. ++++++|+||++++|+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 4556777899988763 33799999999999999999999999999999999998774 589999999
Q ss_pred ccCC---hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCC-----C
Q 001291 920 YPKK---QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGL-----P 991 (1106)
Q Consensus 920 ~~~~---~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~-----~ 991 (1106)
.+.. ...++++++||+|++.+++ -|++||+.++. .+. .++.+.++++..++.++.+...|. .
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~----s~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDA----SDEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcC----CHHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8864 4568899999999998775 69999998763 112 234578889999988776653222 2
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
|..+|||||+|||++||||+.+++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|++
T Consensus 453 ~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld~ 529 (559)
T COG4988 453 GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLDN 529 (559)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEecC
Confidence 4467999999999999999999999999999999999999999999999976 599999999985 5678999999985
Q ss_pred CCEEEEEecCCCc
Q 001291 1072 GGREVYVGPLGHH 1084 (1106)
Q Consensus 1072 gG~~~~~G~~~~~ 1084 (1106)
|++++.|...+.
T Consensus 530 -G~l~~~g~~~~L 541 (559)
T COG4988 530 -GRLVEQGTHEEL 541 (559)
T ss_pred -CceeccCCHHHH
Confidence 799999987643
No 146
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=343.27 Aligned_cols=216 Identities=25% Similarity=0.331 Sum_probs=179.9
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++. +..+|+|+||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 3678888877631 23599999999999999999999999999999999998653 589999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.. ...++.+||++|++. ..+..||.||+.|+.... ....+..++.+.++++.++|.+..++.+ .+|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCH
Confidence 43 223457999999873 345679999998864321 2333444566889999999987777664 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.||++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999987 46788999999975 789999
Q ss_pred ecCC
Q 001291 1079 GPLG 1082 (1106)
Q Consensus 1079 G~~~ 1082 (1106)
|+..
T Consensus 220 g~~~ 223 (274)
T PRK13647 220 GDKS 223 (274)
T ss_pred CCHH
Confidence 8754
No 147
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.8e-37 Score=336.35 Aligned_cols=215 Identities=22% Similarity=0.335 Sum_probs=179.6
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 45777776653 2469999999999999999999999999999999999865 35899999998754
Q ss_pred h-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 924 Q-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 924 ~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
. ...++.++|++|++..++.+||.||+.+...... .......++.+.++++.+++.+..+..+ ..||+
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCH
Confidence 2 2335579999999988888999999987542111 1223344556789999999987766653 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..++++|++++++|+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999998877999999999997 47778999999985 789999
Q ss_pred ecCC
Q 001291 1079 GPLG 1082 (1106)
Q Consensus 1079 G~~~ 1082 (1106)
|+..
T Consensus 218 g~~~ 221 (240)
T PRK09493 218 GDPQ 221 (240)
T ss_pred CCHH
Confidence 8765
No 148
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.7e-37 Score=332.33 Aligned_cols=206 Identities=26% Similarity=0.347 Sum_probs=172.0
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ +++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 45677776652 124699999999999999999999999999999999998653 5899999998764
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. .+++.++|++|++.+++..|+.||+.+....+. ......++.++++++.+++.+..+..+ .+||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 235679999999988888999999988654321 223334567889999999987666553 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++...||++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999997 577789999999864
No 149
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-37 Score=347.24 Aligned_cols=220 Identities=24% Similarity=0.293 Sum_probs=179.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++... .....+|+||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 67888888874210 0123599999999999999999999999999999999998764 4799999876531
Q ss_pred ---------------------------hhcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHH
Q 001291 924 ---------------------------QETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVM 975 (1106)
Q Consensus 924 ---------------------------~~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l 975 (1106)
....++.+||++|++. .+...||+||+.|+.... ....+..++++.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 1224567999999863 344579999998875432 234445566789999
Q ss_pred HHcCCC-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecC
Q 001291 976 ELVELK-PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1054 (1106)
Q Consensus 976 ~~~~l~-~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~ 1054 (1106)
+.++|. ++.+..+ .+||||||||++||+||+.+|++|||||||+|||+.++..+++.|+++.+.|+|||++|||
T Consensus 150 ~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 5666553 4699999999999999999999999999999999999999999999998779999999999
Q ss_pred ccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1055 PSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1055 ~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
++ .+.+.|||+++|++ |++++.|+..+
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~~~ 251 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDTYD 251 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCHHH
Confidence 87 47789999999975 78999987653
No 150
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-37 Score=333.55 Aligned_cols=216 Identities=25% Similarity=0.339 Sum_probs=177.5
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++.. ....++|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i~ 74 (233)
T PRK11629 6 LQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTP--TSGDVIFNGQPMS 74 (233)
T ss_pred EEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcC
Confidence 7788888876421 0114699999999999999999999999999999999998653 5899999998764
Q ss_pred hhc------c-cceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 001291 924 QET------F-ARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGL 996 (1106)
Q Consensus 924 ~~~------~-~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~L 996 (1106)
... . ++.++|++|++.+++.+|++||+.+....+ ....+..++.++++++.+++.+..+..+ .+|
T Consensus 75 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 146 (233)
T PRK11629 75 KLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SEL 146 (233)
T ss_pred cCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhC
Confidence 311 2 256999999988888899999998864332 1223344567889999999987766653 469
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 997 S~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
|||||||++|||||+.+|+||||||||+|||+.++..+.+.|+++++ +|+|||++||+++. + +.+|++++|++ |++
T Consensus 147 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~~~~l~~-G~i 223 (233)
T PRK11629 147 SGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSRQLEMRD-GRL 223 (233)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999875 58999999999863 4 45689999975 789
Q ss_pred EEEecC
Q 001291 1076 VYVGPL 1081 (1106)
Q Consensus 1076 ~~~G~~ 1081 (1106)
++.|++
T Consensus 224 ~~~~~~ 229 (233)
T PRK11629 224 TAELSL 229 (233)
T ss_pred EEEecc
Confidence 988875
No 151
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-37 Score=334.07 Aligned_cols=205 Identities=28% Similarity=0.385 Sum_probs=174.4
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc------cceEEEEcCCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999997 9999999998754321 357999999998899
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.+.....+.. ..+....++.+++.+||++..++.+.+
T Consensus 96 ~~t~~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~- 140 (233)
T cd03258 96 SRTVFENVALPLEIAGVP----------------------------------KAEIEERVLELLELVGLEDKADAYPAQ- 140 (233)
T ss_pred CCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhhhhcChhh-
Confidence 999999999875432210 000122456789999999888877654
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++... .+++|++++|+..++.+++|++++|+
T Consensus 141 ----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 141 ----LSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRE-LGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999987543 34566667888889999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 001291 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 152
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=344.22 Aligned_cols=218 Identities=24% Similarity=0.360 Sum_probs=178.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-------CccceEEEEcCCC-C
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHD-N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 236 (1106)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999998 99999999987531 1135799999985 2
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-cccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
.+...||+||+.|+....+.. ..+....++.+++.+||+ ...++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------------------------------EEDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCChhhhhCC
Confidence 344679999999876433210 001123467789999997 567777
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+.. |||||||||+||++|+.+|++|||||||+|||+.++.++.+.|+++... .+++|++++|+.+++.++||+|
T Consensus 143 ~~~-----LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 PFE-----LSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 665 9999999999999999999999999999999999999999999987653 3556777889999999999999
Q ss_pred EEecCCeEEEEcCHHHHHH---HHHhcCCCCCC
Q 001291 396 ILLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1106)
++|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999988742 34444555443
No 153
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-37 Score=344.44 Aligned_cols=218 Identities=27% Similarity=0.399 Sum_probs=179.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC-----ccceEEEEcCCCC-CC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDN-HI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1106)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999998 999999999876432 2467999999853 44
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc--ccccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD--ICADTMV 316 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1106)
..+||+||+.|+....+.. .++....++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccCCc
Confidence 5689999999875432210 011223467889999997 5677766
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
.. ||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+++|+.++|+..++..+||+|+
T Consensus 143 ~~-----LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 143 FE-----LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred cc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 54 9999999999999999999999999999999999999999999988653 35667778899999999999999
Q ss_pred EecCCeEEEEcCHHHHHH---HHHhcCCCCCC
Q 001291 397 LLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1106)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999998753 23345665543
No 154
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-37 Score=337.69 Aligned_cols=212 Identities=27% Similarity=0.349 Sum_probs=177.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 45677776553 24699999999999999999999999999999999998653 4899999998764
Q ss_pred hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 001291 924 QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1106)
Q Consensus 924 ~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqr 1003 (1106)
. ....+||++|++.+++..|+.||+.+....+ ........+.+.++++.+++.+..+..+ .+||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLA---GVEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHH
Confidence 3 2245899999998888899999998764332 1223334456889999999987666553 4699999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEec-CCEEEEEecC
Q 001291 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGREVYVGPL 1081 (1106)
Q Consensus 1004 l~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~-gG~~~~~G~~ 1081 (1106)
++|||||+.+|++|||||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++...||++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999997 57788999999985 6899988754
No 155
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-37 Score=345.55 Aligned_cols=219 Identities=25% Similarity=0.287 Sum_probs=179.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.|+... ....++|+||||+|++||++||+|+||||||||+++|+|...+ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67889988874211 0124599999999999999999999999999999999998663 4899999998763
Q ss_pred h-------hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 001291 924 Q-------ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~-------~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~ 994 (1106)
. ..+++.+|||+|++. .+...||.||+.|+.... ....++.++.++++++.++|. ...+..+ .
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP-----F 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----c
Confidence 1 234567999999863 233479999998875322 223444456789999999996 5555543 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
+||+|||||++|||||+.+|++|||||||+|||+.++..++++|+++.++ |.|||++|||++ ++.+.||++++|+ +|
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KG 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CC
Confidence 69999999999999999999999999999999999999999999999764 899999999997 5778899999997 57
Q ss_pred EEEEEecCC
Q 001291 1074 REVYVGPLG 1082 (1106)
Q Consensus 1074 ~~~~~G~~~ 1082 (1106)
++++.|+..
T Consensus 223 ~i~~~g~~~ 231 (290)
T PRK13634 223 TVFLQGTPR 231 (290)
T ss_pred EEEEECCHH
Confidence 999998754
No 156
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-37 Score=342.58 Aligned_cols=224 Identities=28% Similarity=0.391 Sum_probs=182.5
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-------CccceEEEEcCCC-CC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHD-NH 237 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 237 (1106)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999998 99999999987521 1245799999985 24
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-ccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMV 316 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1106)
+...||.||+.|+....+.. ..+....+..+++.+||. ...++.+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~~ 142 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIP----------------------------------KEKAEKIAAEKLEMVGLADEFWEKSP 142 (288)
T ss_pred cccchHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhccCCc
Confidence 44579999999986543210 001123467789999996 4667666
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
.. ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.++||+|+
T Consensus 143 ~~-----LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 143 FE-----LSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred cc-----CCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 54 999999999999999999999999999999999999999999998754 3 4567778888999999999999
Q ss_pred EecCCeEEEEcCHHHHH---HHHHhcCCCCCCCCChhHHH
Q 001291 397 LLSDGQIVYQGPRELVL---EFFESMGFKCPKRKGVADFL 433 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~ad~l 433 (1106)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999875 34556777776554444433
No 157
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-37 Score=331.56 Aligned_cols=200 Identities=29% Similarity=0.440 Sum_probs=169.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999998 9999999988754322 3579999999888889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.++....+.. . .+....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------K------------------------AEIRARVRELLELVGLEGLLNRYPHE----- 130 (213)
T ss_pred HHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhcChhh-----
Confidence 99999865432110 0 00112356788999999888887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.++||+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999987643 345666788888999999999999999999
Q ss_pred EEEc
Q 001291 404 VYQG 407 (1106)
Q Consensus 404 v~~G 407 (1106)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 158
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.8e-37 Score=331.25 Aligned_cols=205 Identities=26% Similarity=0.369 Sum_probs=170.9
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ +++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELP--TSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEccc
Confidence 4567776653 124699999999999999999999999999999999998653 58999999986532
Q ss_pred ------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 925 ------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 925 ------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
...++.++|++|++.+++.+|+.||+.+....+. ...+..++.++++++.+++.+..+..+ .+||+
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1234679999999988888999999988654321 223344556889999999987666553 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ .+.+.||++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999998777999999999987 466789999999854
No 159
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.7e-37 Score=345.42 Aligned_cols=206 Identities=27% Similarity=0.392 Sum_probs=176.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 35999999999999999999999999999999999999998 999999998864321 2467999999998899999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.+.....+... .+....++.+++.+||++..++.+++
T Consensus 94 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~~---- 135 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVAL---- 135 (303)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchhh----
Confidence 9999987544322100 00112356678999999988888865
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.++||+|++|++|+
T Consensus 136 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 136 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998754 3 4567778899999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+++.|+++++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988754
No 160
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=7.3e-37 Score=331.67 Aligned_cols=221 Identities=38% Similarity=0.617 Sum_probs=178.0
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC-CceeEEEEEEcCccC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYITGDIRISGYPK 922 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~-~~~~~G~i~i~g~~~ 922 (1106)
+.|+||.|.++.. ...+++|+|+||+|++||+++|+||||||||||+++|+|..+ +.+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4567777766421 013579999999999999999999999999999999999764 123589999999876
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHH-HHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEE-VMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~-~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
.....++.++|++|++..++.+|+.||+.|..................+++ .++.+++.+..+..+ .+||+|||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHH
Confidence 544456779999999988888999999988754332211122222234455 888999887666543 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||++..++.+.||++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777999999999984357889999999985 7888765
No 161
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-37 Score=332.29 Aligned_cols=205 Identities=30% Similarity=0.390 Sum_probs=174.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999998 999999998764321 1357999999998899999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.+.....+.. ..+....++.+++.+||++..++.+++
T Consensus 90 v~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (220)
T cd03265 90 GWENLYIHARLYGVP----------------------------------GAERRERIDELLDFVGLLEAADRLVKT---- 131 (220)
T ss_pred HHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCChhh----
Confidence 999999875433210 001123467789999999888888765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.+++|+|++|.+|+
T Consensus 132 -LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 132 -YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEE-FGMTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999987653 24566778899999999999999999999
Q ss_pred EEEEcCHHHH
Q 001291 403 IVYQGPRELV 412 (1106)
Q Consensus 403 iv~~G~~~~~ 412 (1106)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987753
No 162
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-37 Score=333.69 Aligned_cols=210 Identities=28% Similarity=0.411 Sum_probs=174.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 35999999999999999999999999999999999999987 9999999988754322 3579999999888889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.|+....+...+ + + ..+....++.+++.+||++..++.+++
T Consensus 92 ~e~l~~~~~~~~~~~~-----------------~--~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (239)
T cd03296 92 FDNVAFGLRVKPRSER-----------------P--P-----------EAEIRAKVHELLKLVQLDWLADRYPAQ----- 136 (239)
T ss_pred HHHHhhhhhhcccccc-----------------C--C-----------HHHHHHHHHHHHHHcCChhhhhcChhh-----
Confidence 9999987543211000 0 0 001122456789999998888877765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++... +++|+.++|+..++.+++|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 99999999999999999999999999999999999999999999876532 45566678888889999999999999999
Q ss_pred EEEcCHHHHH
Q 001291 404 VYQGPRELVL 413 (1106)
Q Consensus 404 v~~G~~~~~~ 413 (1106)
++.|+++++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999988763
No 163
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-37 Score=336.19 Aligned_cols=214 Identities=27% Similarity=0.372 Sum_probs=177.6
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++. .+.+|+|+||+|++|++++|+||||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCc
Confidence 45677766531 14699999999999999999999999999999999998653 57999999987532
Q ss_pred ---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc--ccccccCCCCCCCCCHH
Q 001291 925 ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP--LRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 925 ---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~--~~~~~~~~~g~~~LS~G 999 (1106)
...++.++|++|++.+++.+|++||+.+....+ ....+...+.+.++++.+++.+ ..+..+ .+||+|
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLL---KWPKEKIRERADELLALVGLDPAEFADRYP-----HELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHH
Confidence 233457899999998888899999998765432 1223344556889999999985 555543 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999998764 899999999987 47788999999985 789998
Q ss_pred ecCC
Q 001291 1079 GPLG 1082 (1106)
Q Consensus 1079 G~~~ 1082 (1106)
|+..
T Consensus 218 ~~~~ 221 (242)
T cd03295 218 GTPD 221 (242)
T ss_pred cCHH
Confidence 8754
No 164
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-37 Score=329.87 Aligned_cols=200 Identities=29% Similarity=0.403 Sum_probs=170.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999987 9999999988753 246799999998888889999
Q ss_pred HHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCC
Q 001291 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgL 324 (1106)
||+.++....+.. . .+....++.+++.+||++..++.+++ |
T Consensus 92 e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----L 132 (220)
T cd03293 92 DNVALGLELQGVP----------K------------------------AEARERAEELLELVGLSGFENAYPHQ-----L 132 (220)
T ss_pred HHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCCccc-----C
Confidence 9999875433210 0 00112456789999998888877765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec--CCe
Q 001291 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS--DGQ 402 (1106)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 402 (1106)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.++||++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999875433 4556667888888999999999999 799
Q ss_pred EEEEcCH
Q 001291 403 IVYQGPR 409 (1106)
Q Consensus 403 iv~~G~~ 409 (1106)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988764
No 165
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.9e-37 Score=338.81 Aligned_cols=219 Identities=25% Similarity=0.279 Sum_probs=177.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ .++++|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhh
Confidence 45677776553 024599999999999999999999999999999999998653 5899999998753
Q ss_pred h------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcC-----CCCCChHHHHHHHHHHHHHcCCCcccccccCCCC
Q 001291 924 Q------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRL-----PPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG 992 (1106)
Q Consensus 924 ~------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~-----~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g 992 (1106)
. ..+++.+||++|++.+++.+|+.||+.++..... .........++++.++++.+++.+..+..+
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 143 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA---- 143 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 2 1235679999999988888999999976532100 001112233456788999999987666553
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEec
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
.+||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.||++++|++
T Consensus 144 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 144 -DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 469999999999999999999999999999999999999999999998754 899999999997 46788999999985
Q ss_pred CCEEEEEecCCC
Q 001291 1072 GGREVYVGPLGH 1083 (1106)
Q Consensus 1072 gG~~~~~G~~~~ 1083 (1106)
|++++.|+..+
T Consensus 222 -G~i~~~~~~~~ 232 (243)
T TIGR02315 222 -GEIVFDGAPSE 232 (243)
T ss_pred -CEEEecCCHHH
Confidence 78998887643
No 166
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-37 Score=347.55 Aligned_cols=219 Identities=24% Similarity=0.332 Sum_probs=179.7
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.|+... .....+|+||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 488999998875210 0123599999999999999999999999999999999998763 589999999765
Q ss_pred Ch-------------------hcccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC
Q 001291 923 KQ-------------------ETFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK 981 (1106)
Q Consensus 923 ~~-------------------~~~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~ 981 (1106)
.. ...++.+|||+|++. +++ .|++||+.|+.... ....++....+.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 234567999999873 444 59999998874322 223444556788999999996
Q ss_pred -cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHH
Q 001291 982 -PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1060 (1106)
Q Consensus 982 -~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~ 1060 (1106)
...+.. +.+||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++|+|||++|||++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455544 3469999999999999999999999999999999999999999999998777999999999987 477
Q ss_pred HhcCeEEEEecCCEEEEEecCC
Q 001291 1061 EAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1061 ~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
+.||++++|++ |++++.|+..
T Consensus 241 ~~adri~vl~~-G~i~~~g~~~ 261 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTPY 261 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCHH
Confidence 88999999985 7999998764
No 167
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.8e-37 Score=336.83 Aligned_cols=215 Identities=28% Similarity=0.371 Sum_probs=178.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 67788877663 24699999999999999999999999999999999998653 4799999997653
Q ss_pred h-----------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCC
Q 001291 924 Q-----------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG 992 (1106)
Q Consensus 924 ~-----------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g 992 (1106)
. ...++.++|++|++.+++..|+.||+.++..... ....+...+.+.++++.+++.+..+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 142 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP---- 142 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh----
Confidence 2 1234579999999988888999999987542211 1223344556789999999987666543
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
.+||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++
T Consensus 143 -~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 143 -RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred -hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999999877999999999987 47788999999985
Q ss_pred CEEEEEecCC
Q 001291 1073 GREVYVGPLG 1082 (1106)
Q Consensus 1073 G~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 220 G~i~~~~~~~ 229 (250)
T PRK11264 220 GRIVEQGPAK 229 (250)
T ss_pred CEEEEeCCHH
Confidence 7899988754
No 168
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=5.6e-37 Score=331.37 Aligned_cols=213 Identities=25% Similarity=0.388 Sum_probs=176.6
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++. +.+++|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRP--TSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 46677766531 114699999999999999999999999999999999998653 58999999987642
Q ss_pred --hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 925 --~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
...++.+||++|++.+++..|++||+.+....+. .......+.++++++.+++.+..+..+ .+||+||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHH
Confidence 2345679999999988888999999987654331 222334456789999999987666653 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
|++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ .+.+.||++++|++ |++++.|+.
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999875 699999999997 47778999999985 789888764
No 169
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-37 Score=317.31 Aligned_cols=204 Identities=28% Similarity=0.410 Sum_probs=172.3
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh----cccceEEEEccCCCCCC
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE----TFARISGYCEQNDIHSP 942 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~g~v~q~~~~~~ 942 (1106)
++.++|++|||++++||+++|+|+|||||||||++|+|..+. .+|+|.++|.++... ..++.++||||....++
T Consensus 14 G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 14 GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 567899999999999999999999999999999999998763 489999999987542 34557999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001291 943 FVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVE-LKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1106)
Q Consensus 943 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDE 1021 (1106)
.+||+|||..++..+.. ++..+..++++.+.+- |.+.++.+.| .|||||||.++|||||+.+|++|+|||
T Consensus 92 ~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLDE 162 (237)
T COG0410 92 RLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLDE 162 (237)
T ss_pred hCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEecC
Confidence 99999999988654421 1112222677777764 5555665543 599999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1022 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
||.||-|.-.+.|.++|+++.++ |.||+++-++... ..+.+||.++|.+ |++++.|+..+
T Consensus 163 Ps~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~-Al~iaDr~yvle~-Griv~~G~~~e 223 (237)
T COG0410 163 PSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARF-ALEIADRGYVLEN-GRIVLSGTAAE 223 (237)
T ss_pred CccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHH-HHHhhCEEEEEeC-CEEEEecCHHH
Confidence 99999999999999999999865 7799999998874 6789999999985 79999998654
No 170
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-37 Score=343.03 Aligned_cols=220 Identities=24% Similarity=0.328 Sum_probs=179.5
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++|.++... ...+.+|+||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 56888888874210 0113599999999999999999999999999999999998763 5899999998763
Q ss_pred h-------hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 001291 924 Q-------ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~-------~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~ 994 (1106)
. ..+++.+||++|++. .+...||.||+.|+.... ....++.+..+.++++.++|. .+.+.. +.
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 143 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----PF 143 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcccchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----cc
Confidence 1 234567999999873 233469999998875332 223445566788999999996 455554 34
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
.||||||||++|||||+.+|+||||||||+|||+.++..+.+.|++++++|+|||++|||++ ++.+.||++++|++ |+
T Consensus 144 ~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G~ 221 (288)
T PRK13643 144 ELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-GH 221 (288)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CE
Confidence 69999999999999999999999999999999999999999999999877999999999997 47788999999985 79
Q ss_pred EEEEecCCC
Q 001291 1075 EVYVGPLGH 1083 (1106)
Q Consensus 1075 ~~~~G~~~~ 1083 (1106)
+++.|++.+
T Consensus 222 i~~~g~~~~ 230 (288)
T PRK13643 222 IISCGTPSD 230 (288)
T ss_pred EEEECCHHH
Confidence 999987643
No 171
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-37 Score=310.40 Aligned_cols=208 Identities=30% Similarity=0.421 Sum_probs=178.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCcc---ceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE---RTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1106)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+|++||.+++.+.+. +.-|..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45999999999999999999999999999999999999998 99999999999887663 5678999998887788
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+|-+.++..-.+.|.. ..+...+++.+|...++.+.+.+..-
T Consensus 91 tv~eVV~mGr~p~~~g~~--------------------------------~~e~~~i~~~ala~~d~~~la~R~y~---- 134 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE--------------------------------PEEDERIAAQALAATDLSGLAGRDYR---- 134 (259)
T ss_pred EHHHHHHhcccccccCCC--------------------------------chhhHHHHHHHHHHcChhhhhccchh----
Confidence 999999998754322210 11233457788888999888876653
Q ss_pred CCCChhhhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 322 RGVSGGQKKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~------~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
.|||||||||.+||.|+. ++++||||||||+||......++++.|++++. + ..|+.+.|+..-+..+||+|
T Consensus 135 -~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 135 -TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred -hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhhee
Confidence 499999999999999963 44588999999999999999999999999874 3 56667889999999999999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++||++..|++++++.
T Consensus 212 vll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 212 VLLHQGRVIASGSPQDVLT 230 (259)
T ss_pred eeeeCCeEeecCCHHHhcC
Confidence 9999999999999998863
No 172
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.4e-37 Score=330.51 Aligned_cols=195 Identities=24% Similarity=0.378 Sum_probs=166.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999997 999999998875432 235799999999889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++.+..+.. . .+....++.+++.+||++..++.+++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 138 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVP----------P------------------------RDANERVSAALEKVGLEGKAHALPMQ 138 (216)
T ss_pred ccccHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCChhh
Confidence 9999999999876532210 0 01123456789999999888887765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+.+++..+||+|++|
T Consensus 139 -----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 139 -----LSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998753 3 455677888889999999999999
Q ss_pred cCCeE
Q 001291 399 SDGQI 403 (1106)
Q Consensus 399 ~~G~i 403 (1106)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 173
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.8e-38 Score=313.17 Aligned_cols=210 Identities=22% Similarity=0.369 Sum_probs=183.0
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCcc----ceEEEEcCCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE----RTAAYISQHDNHI 238 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1106)
+++++++|||+.+++||+++|+|||||||||.+.++.|+..|+ +|+|.++|.+++..... .-+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 3467999999999999999999999999999999999999999 99999999999876543 3589999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
-.+||+|||.-....+... ....+.+...+.+|+.|+|.+++|..-..
T Consensus 92 r~LtV~dNi~~vlE~~~~d--------------------------------~~~~~~~~~l~~LL~ef~i~hlr~~~a~s 139 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKD--------------------------------LKKAERKEELDALLEEFHITHLRDSKAYS 139 (243)
T ss_pred hcCcHHHHHHHHHhhhhcc--------------------------------hhHHHHHHHHHHHHHHhchHHHhcCcccc
Confidence 9999999999776543210 01112344578899999999999987554
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
||||||+|+-|||||+.+|+.++||||++|.||-+..+|.+.++.+.. .+.-|++.-|...|+..+|||.+++
T Consensus 140 -----LSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 140 -----LSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred -----cccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEEE
Confidence 999999999999999999999999999999999999999999998864 3555666789999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 001291 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999999864
No 174
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.7e-37 Score=330.24 Aligned_cols=208 Identities=24% Similarity=0.312 Sum_probs=173.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ +++.+|+|+||+|++|+++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERP--SAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 46778877662 123699999999999999999999999999999999998653 5899999998653
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. .+++.++|++|++.+++..|+.||+.+....+ ....++....++++++.+++.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCC
Confidence 21 13567999999998878899999998865432 1223344456788999999987666553 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|.|||++||+++ ++...||++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777899999999997 47778999999986 565
No 175
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6e-37 Score=331.63 Aligned_cols=199 Identities=31% Similarity=0.449 Sum_probs=166.3
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh---c-ccceEEEEccCCCCCCCC
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE---T-FARISGYCEQNDIHSPFV 944 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~g~v~q~~~~~~~~ 944 (1106)
+++|+|+||+|++|+++||+||||||||||+++|+|..++ ..|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 4699999999999999999999999999999999998663 589999999875431 1 245699999999888889
Q ss_pred CHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCC
Q 001291 945 TVYESLFYSAWLRLPPEVNSETRKMFIEEVMELV-ELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1023 (1106)
Q Consensus 945 tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~-~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPT 1023 (1106)
|++||+.+....+. .......+.++++.+ ++.+..+..+ .+||+|||||++|||||+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLA-----GTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988653321 122334566778877 4665555543 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1024 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1024 sgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
+|||+.++..+++.|++++++|+|||++||+++ ++...||++++|++ |++++.|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999877899999999987 47788999999985 788888764
No 176
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=339.35 Aligned_cols=216 Identities=24% Similarity=0.336 Sum_probs=177.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCC-CCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHD-NHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1106)
..+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35999999999999999999999999999999999999998 9999999998764322 35799999986 36778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+|||.|+.+..+.. .++....++.+++.+||++..+..+++
T Consensus 97 ~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------------------------------HEEMKERVNEALELVGMQDFKEREPAR-- 140 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999999875432210 011123467789999999888887765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++ ..||+|++|++
T Consensus 141 ---LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 141 ---LSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999886533 45566677777777 58999999999
Q ss_pred CeEEEEcCHHHHHH---HHHhcCCCCC
Q 001291 401 GQIVYQGPRELVLE---FFESMGFKCP 424 (1106)
Q Consensus 401 G~iv~~G~~~~~~~---~f~~~G~~~p 424 (1106)
|+++..|+++++.. .++..|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCc
Confidence 99999999988753 2344455433
No 177
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.3e-37 Score=339.08 Aligned_cols=207 Identities=25% Similarity=0.351 Sum_probs=176.5
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1106)
.+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 457999999999999999999999999999999999999998 9999999988754321 246999999998
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
+++.+||+||+.++....+.. . .+....++.+++.+||++..++.+
T Consensus 113 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 158 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQGVP----------R------------------------AEREERAAEALELVGLEGWEHKYP 158 (269)
T ss_pred cCCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhCCc
Confidence 898999999999875432210 0 001124567899999998888887
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
++ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+. .+.+|++++|+..++.+++|+++
T Consensus 159 ~~-----LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiii~tH~~~~~~~~~d~v~ 232 (269)
T cd03294 159 DE-----LSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAE-LQKTIVFITHDLDEALRLGDRIA 232 (269)
T ss_pred cc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEE
Confidence 65 9999999999999999999999999999999999999999999987653 34566667888889999999999
Q ss_pred EecCCeEEEEcCHHHHH
Q 001291 397 LLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++++.|+++++.
T Consensus 233 ~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 233 IMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988774
No 178
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-36 Score=332.20 Aligned_cols=213 Identities=28% Similarity=0.389 Sum_probs=175.7
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 45677776653 34699999999999999999999999999999999998653 4899999998753
Q ss_pred hh--cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 924 QE--TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 924 ~~--~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
.. ...+.++|++|++.+++..|++||+.+....+ ....+...+.+.++++.+++.+..+..+ .+||+|||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 21 22346899999988878899999998765332 1223334456788999999987666653 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++. + ..||++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999874 58999999999973 5 45999999985 78998887
Q ss_pred CC
Q 001291 1081 LG 1082 (1106)
Q Consensus 1081 ~~ 1082 (1106)
..
T Consensus 216 ~~ 217 (236)
T TIGR03864 216 AA 217 (236)
T ss_pred HH
Confidence 54
No 179
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-37 Score=328.62 Aligned_cols=222 Identities=25% Similarity=0.350 Sum_probs=195.8
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1106)
...-++|+|+.++.||+..|||=||||||||+++|.++.+|+ .|+|.++|.++..... ++.+++|+|+..
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345789999999999999999999999999999999999998 9999999999866543 367999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
++|+.||.||..|+.+.+|++. ++++.++.+.|+..||+..++.++
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~----------------------------------~er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPK----------------------------------AEREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCH----------------------------------HHHHHHHHHHHHHcCchhhhhcCc
Confidence 9999999999999999988632 123456778899999999999988
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
.+ ||||+||||.+||||+.+|+|||||||+|+|||--+.++.+.|.++-... +.+|++++|+.+|++.+.|||.
T Consensus 163 ~e-----LSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l-~KTIvFitHDLdEAlriG~rIa 236 (386)
T COG4175 163 NE-----LSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKL-KKTIVFITHDLDEALRIGDRIA 236 (386)
T ss_pred cc-----ccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHh-CCeEEEEecCHHHHHhccceEE
Confidence 76 99999999999999999999999999999999999999998887775544 5566778999999999999999
Q ss_pred EecCCeEEEEcCHHHHHHHHHhcCCCCCCCCChhHHHHhh
Q 001291 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 436 (1106)
+|.+|+||..|+++|++. .|.+.-+++|..++
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 46666667777665
No 180
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-37 Score=310.11 Aligned_cols=217 Identities=26% Similarity=0.383 Sum_probs=183.2
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
++.+|++|++. ++.+|++||++++|||++||+|||||||||||+.|+|...+ ..|.+.++|.+..
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 45678888763 56799999999999999999999999999999999997764 4799999999876
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 001291 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gq 1000 (1106)
+ ...++..+.++|+..+.+..||+|-+.++..-... .....+..+.++++|+..++..+..... ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 5 33456779999999888778999999998643211 1122244455789999999998877653 4699999
Q ss_pred HHHHHHHHHHhc------CCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 1001 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 1001 rqrl~iA~aL~~------~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
||||.+||.|++ ++++||||||||+||...+..++++.|+++++|..|++|-||++. ...+||||++|+ +|+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCe
Confidence 999999999986 446899999999999999999999999999999999999999996 678999999998 579
Q ss_pred EEEEecCCC
Q 001291 1075 EVYVGPLGH 1083 (1106)
Q Consensus 1075 ~~~~G~~~~ 1083 (1106)
++..|++.+
T Consensus 219 v~a~g~p~~ 227 (259)
T COG4559 219 VIASGSPQD 227 (259)
T ss_pred EeecCCHHH
Confidence 999998875
No 181
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.3e-37 Score=329.84 Aligned_cols=199 Identities=27% Similarity=0.420 Sum_probs=164.0
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCC--CCCCH
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHS--PFVTV 946 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~--~~~tv 946 (1106)
..+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.. ..++.++|++|++.+. +..|+
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999998653 5899999998653 2456799999998653 33799
Q ss_pred HHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCC
Q 001291 947 YESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1106)
Q Consensus 947 ~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsg 1025 (1106)
.||+.+....+.. .....+..++.++++++.+++.+..++.+ .+||||||||++|||||+.+|++|||||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 00112234456889999999987666653 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1026 LD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999998777999999999987 47788999999975 4 66654
No 182
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8.2e-37 Score=333.75 Aligned_cols=215 Identities=28% Similarity=0.401 Sum_probs=175.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 35999999999999999999999999999999999999987 9999999998765432 2469999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++....+... ... .. . .....+....++++++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~---~~---~-----------~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLL---AR---A-----------RREEREARERAEELLERVGLADLADRPAGE-- 143 (236)
T ss_pred CCHHHHHHHHHhhccccc-------ccc---cc---c-----------cccHHHHHHHHHHHHHHcCccchhhCChhh--
Confidence 999999998754321100 000 00 0 000011223467789999998888877765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.++||+|++|++
T Consensus 144 ---LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 144 ---LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998764 3 45566778888999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 001291 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 183
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.4e-36 Score=342.89 Aligned_cols=205 Identities=26% Similarity=0.382 Sum_probs=178.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999998875422 2457999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|.||+.|.+++.+... .+....++.+++.+||++..|+.++.
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~---- 133 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIGQ---- 133 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchhh----
Confidence 9999998765543210 01122467789999999998888765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+++|++|||||||+|||+.++..+.+.++++. .+ ++|+.++|..+++.++||+|++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 134 -LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999874 24 667778899999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998764
No 184
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.3e-36 Score=337.96 Aligned_cols=228 Identities=19% Similarity=0.285 Sum_probs=185.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+||||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 478888887663 34699999999999999999999999999999999998653 589999999875
Q ss_pred Chh------cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 001291 923 KQE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGL 996 (1106)
Q Consensus 923 ~~~------~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~L 996 (1106)
... ..++.++|++|++.+++.+|+.||+.+...... ....+..+..+.++++.+++.+..+..+ .+|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 321 134569999999888888999999987543211 1223334456788999999987776653 469
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 997 S~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
|||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999987 57788999999975 799
Q ss_pred EEEecCCCc----hhHHHHHHHh
Q 001291 1076 VYVGPLGHH----SCHLISYFEV 1094 (1106)
Q Consensus 1076 ~~~G~~~~~----~~~~~~yf~~ 1094 (1106)
++.|+..+. ....-.|++.
T Consensus 223 ~~~g~~~~~~~~~~~~~~~~~~~ 245 (269)
T PRK11831 223 VAHGSAQALQANPDPRVRQFLDG 245 (269)
T ss_pred EEeCCHHHHhcCCcHHHHHHHHH
Confidence 999876531 1234567764
No 185
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-37 Score=342.59 Aligned_cols=219 Identities=22% Similarity=0.308 Sum_probs=178.6
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++... ...+++|+||||+|++||++||+|+||||||||+++|+|..++ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67888888874210 0123599999999999999999999999999999999998764 4799999998763
Q ss_pred h-------hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 001291 924 Q-------ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~-------~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~ 994 (1106)
. ...++.+|||+|++. .....|+.||+.|+.... ....++..+.+.++++.++|. +..+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----PF 144 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccchhhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----cc
Confidence 2 134567999999863 222359999998864322 233444556788999999996 555554 34
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
+||||||||++|||||+.+|+||||||||+|||+.++..++++|+++.+ .|+|||++||+++ ++.+.||++++|++ |
T Consensus 145 ~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~-G 222 (286)
T PRK13646 145 QMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE-G 222 (286)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 6999999999999999999999999999999999999999999999875 4899999999987 47788999999985 7
Q ss_pred EEEEEecCC
Q 001291 1074 REVYVGPLG 1082 (1106)
Q Consensus 1074 ~~~~~G~~~ 1082 (1106)
++++.|+..
T Consensus 223 ~i~~~g~~~ 231 (286)
T PRK13646 223 SIVSQTSPK 231 (286)
T ss_pred EEEEECCHH
Confidence 999998754
No 186
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=340.68 Aligned_cols=217 Identities=25% Similarity=0.376 Sum_probs=180.9
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++. ++.+|+|+||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p--~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYSD------------GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKP--SSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeCC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CccEEEECCEEC
Confidence 5788999887631 24699999999999999999999999999999999998663 589999999876
Q ss_pred C-----hhcccceEEEEccCCCC-CCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 001291 923 K-----QETFARISGYCEQNDIH-SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGL 996 (1106)
Q Consensus 923 ~-----~~~~~~~~g~v~q~~~~-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~L 996 (1106)
. ...+++.+||++|++.. ....|++||+.++.... ....+...+.++++++.++|.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccC
Confidence 3 12345679999998743 34579999998764322 2233444567889999999988777653 469
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 997 S~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
|+|||||++|||||+.+|+||+|||||+|||+.++..++++|+++.++ |+|||++||+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999997 46678999999985 689
Q ss_pred EEEecCCC
Q 001291 1076 VYVGPLGH 1083 (1106)
Q Consensus 1076 ~~~G~~~~ 1083 (1106)
++.|+..+
T Consensus 221 ~~~g~~~~ 228 (283)
T PRK13636 221 ILQGNPKE 228 (283)
T ss_pred EEeCCHHH
Confidence 99997653
No 187
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=333.72 Aligned_cols=216 Identities=26% Similarity=0.368 Sum_probs=179.4
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++++++.++ ++.+|+|+||++++|+++||+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 56777776653 34699999999999999999999999999999999998653 5899999998753
Q ss_pred h----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 Q----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ...++.++|++|++..++.+|+.||+.+....+. ....+..+..++++++.+++.+..+..+ .+||+|
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHH
Confidence 2 1134569999999988888999999987543221 1223344556889999999987665543 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||++|||||+.+|++|+|||||+|||+.++..+.+.++++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999986 57788999999975 7899988
Q ss_pred cCCC
Q 001291 1080 PLGH 1083 (1106)
Q Consensus 1080 ~~~~ 1083 (1106)
+..+
T Consensus 220 ~~~~ 223 (241)
T PRK10895 220 TPTE 223 (241)
T ss_pred CHHH
Confidence 7653
No 188
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=8.4e-37 Score=328.32 Aligned_cols=205 Identities=24% Similarity=0.338 Sum_probs=171.1
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++.+|+++||++++|+++||+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCc
Confidence 4667776653 24699999999999999999999999999999999998653 58999999987531
Q ss_pred -----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 925 -----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 925 -----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
...++.++|++|++.+++.+|+.||+.+...... ....+..++.++++++.+++.+..+..+ .+||+|
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2345679999999988888999999987642111 1223344556789999999987666653 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
||||++|||||+.+|++|+|||||+|||+.+++.+.+.|++++++|+|||++||+++ ++.+.||++++|++|
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877999999999987 577889999999864
No 189
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.5e-37 Score=327.36 Aligned_cols=208 Identities=34% Similarity=0.487 Sum_probs=173.0
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ +.++|+|+||+|++| +++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCcccc
Confidence 4667776553 346999999999999 9999999999999999999998653 58999999987543
Q ss_pred --hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 925 --~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
...++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.+++.+..+..+ .+||+||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 2235679999999988888999999987654331 222333456789999999987766553 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|++|||||+.+|++|||||||+|||+.++..+.+.|+++++ +.|||++||+++ .+.+.+|++++|++ |++++.|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999875 599999999987 46678999999985 6887654
No 190
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=335.07 Aligned_cols=216 Identities=20% Similarity=0.257 Sum_probs=179.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 367888887763 34699999999999999999999999999999999998653 479999999765
Q ss_pred Ch----------------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-c
Q 001291 923 KQ----------------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-Q 985 (1106)
Q Consensus 923 ~~----------------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-~ 985 (1106)
.. ..+++.++|++|++.+++.+|++||+.++..... .......+.++.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1335679999999988888999999987532111 122344456788999999997653 4
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCe
Q 001291 986 SLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1065 (1106)
Q Consensus 986 ~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~ 1065 (1106)
.. +.+||+|||||++|||||+.+|++|+|||||+|||+.+++.+.+.|++++++|+|||++||+++ ++...||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 43 3469999999999999999999999999999999999999999999999877999999999987 46778999
Q ss_pred EEEEecCCEEEEEecCC
Q 001291 1066 LFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1066 v~~l~~gG~~~~~G~~~ 1082 (1106)
+++|++ |++++.|+..
T Consensus 222 i~~l~~-G~i~~~~~~~ 237 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAPE 237 (257)
T ss_pred EEEEEC-CEEEEeCCHH
Confidence 999985 7899988754
No 191
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.4e-37 Score=376.00 Aligned_cols=207 Identities=29% Similarity=0.434 Sum_probs=172.9
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||.++..... ++.++||+|++.+| +.|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCc
Confidence 6999999999999999999999999999999999999998 9999999999887654 68999999987555 679
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.++.. +.+.+..+.|+...+.. -.+..++...||.||+ ++.
T Consensus 563 I~eNi~l~~p-------------------------~~~~e~i~~A~~~ag~~--------~fI~~lP~gy~t~v~E-~G~ 608 (709)
T COG2274 563 IRENIALGNP-------------------------EATDEEIIEAAQLAGAH--------EFIENLPMGYDTPVGE-GGA 608 (709)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhCcH--------HHHHhccccccccccc-CCC
Confidence 9999998642 22222333333222211 1234688899999995 677
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++. .++|+|++.|+ ..+.+.||+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaHR--l~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAHR--LSTIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEcc--chHhhhccEEEEccCCc
Confidence 899999999999999999999999999999999999999999999864 35666665443 45789999999999999
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
|+.+|+++++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999976
No 192
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.6e-36 Score=344.77 Aligned_cols=245 Identities=20% Similarity=0.231 Sum_probs=189.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
-+.++|++.+++............+...+++||||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 477888887665321100000011235799999999999999999999999999999999998764 489999999876
Q ss_pred Chh------cccceEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 001291 923 KQE------TFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGV 993 (1106)
Q Consensus 923 ~~~------~~~~~~g~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~ 993 (1106)
... .+++.++||+|++ .+.|.+|+.||+.+...... .....++.++.+.++++.+++. +..+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 421 2356799999997 46788999999987644321 1234455566788999999995 344544 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
.+||||||||++|||||+.+|++|||||||+|||+.++..|+++|+++.++ |.|||+||||++ .+.+.||++++|++
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999999764 899999999997 47778999999985
Q ss_pred CEEEEEecCCCc----h-hHHHHHHHhCCC
Q 001291 1073 GREVYVGPLGHH----S-CHLISYFEVCPD 1097 (1106)
Q Consensus 1073 G~~~~~G~~~~~----~-~~~~~yf~~~~g 1097 (1106)
|++++.|+..+. . ...-.+.+++|.
T Consensus 238 G~ive~g~~~~i~~~~~~py~~~l~~~~~~ 267 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTKALMSAVPI 267 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHHHHHhhCCC
Confidence 799999975431 1 123345667764
No 193
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=8.4e-37 Score=329.54 Aligned_cols=195 Identities=27% Similarity=0.406 Sum_probs=164.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999997 9999999988754321 3579999999989
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.++....+.. . .+....++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVP----------K------------------------KERRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhcChh
Confidence 99999999999876433210 0 0012245678999999988887776
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
+ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++. +||++++
T Consensus 140 ~-----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 140 E-----LSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEA-GTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred h-----cCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHh-hhcEEEE
Confidence 5 99999999999999999999999999999999999999999999876423 455666777777776 9999999
Q ss_pred ecCCeE
Q 001291 398 LSDGQI 403 (1106)
Q Consensus 398 L~~G~i 403 (1106)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 194
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-37 Score=340.53 Aligned_cols=217 Identities=23% Similarity=0.303 Sum_probs=181.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++.+ ....+|+|+||+|++||++||+|+||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 37788998877421 123599999999999999999999999999999999998663 589999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.. ...++.+||++|++. .++..||+||+.|+.... ....++.++.++++++.++|.+..+..+ .+|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 234567999999974 566789999998874322 2334445567899999999987777654 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||++|||||+.+|+||||||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..||++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999987 35 68999999975 79999
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
.|+..
T Consensus 221 ~g~~~ 225 (279)
T PRK13650 221 TSTPR 225 (279)
T ss_pred ECCHH
Confidence 88764
No 195
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-36 Score=331.00 Aligned_cols=217 Identities=24% Similarity=0.283 Sum_probs=170.7
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++.. .....+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKP--TSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 4677887765310 0013699999999999999999999999999999999998653 5899999998764
Q ss_pred h------hcccceEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 001291 924 Q------ETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~------~~~~~~~g~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~ 994 (1106)
. ..+++.+||++|++ .+.+.+|++||+.+....... ....+..+..++++++.+++. ...+..+ .
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRYP-----H 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCCc-----h
Confidence 3 23456799999998 355679999999876433211 111111122235788999985 4555543 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
+||+|||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++...||++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 69999999999999999999999999999999999999999999999765 899999999997 46678999999985 6
Q ss_pred EEEEEe
Q 001291 1074 REVYVG 1079 (1106)
Q Consensus 1074 ~~~~~G 1079 (1106)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 887654
No 196
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.5e-37 Score=327.77 Aligned_cols=193 Identities=26% Similarity=0.381 Sum_probs=162.2
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh---hcccceEEEEccCCC-CCCCC
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDI-HSPFV 944 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~g~v~q~~~-~~~~~ 944 (1106)
+.+|+|+||+|++|+++||+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++. .++..
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGP--TSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 4699999999999999999999999999999999997653 58999999986532 234567999999975 35678
Q ss_pred CHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCC
Q 001291 945 TVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1024 (1106)
Q Consensus 945 tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTs 1024 (1106)
|+.||+.+..... .......+..++++++.+++.+..++.+ ..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998764322 1222334456788999999987666653 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 1025 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 1025 gLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
|||+.++..+++.|++++++|+|||++||+++ ++...||++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999987 477779999999864
No 197
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=336.30 Aligned_cols=203 Identities=26% Similarity=0.331 Sum_probs=172.7
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCC-CCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5999999999999999999999999999999999999998 9999999998764322 357999999863 45678
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.|+....+.. ..+....++.+++.+||.+..++.+.+
T Consensus 96 tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~~~--- 138 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD----------------------------------KDEVERRVEEALKAVRMWDFRDKPPYH--- 138 (274)
T ss_pred cHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCChhh---
Confidence 9999999875432110 001123467789999999888888765
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++. . +.+|+.++|+.+++.++||+|++|++|
T Consensus 139 --LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 139 --LSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999998764 3 456677889999999999999999999
Q ss_pred eEEEEcCHHHH
Q 001291 402 QIVYQGPRELV 412 (1106)
Q Consensus 402 ~iv~~G~~~~~ 412 (1106)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998754
No 198
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-36 Score=334.19 Aligned_cols=215 Identities=24% Similarity=0.287 Sum_probs=176.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 478888887653 24699999999999999999999999999999999997653 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ..+++.+||++|++.+++ .|++||+.|....+ ....+..++.++++++.+++.+ ..+..
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 124567999999988777 89999998865332 1223334456788999998842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+..||+|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.+ |+|||++||+++ ++.+.||++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999864 899999999987 4778899999997
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++++.|+..
T Consensus 228 ~-G~i~~~~~~~ 238 (258)
T PRK14268 228 M-GELIEFGQTR 238 (258)
T ss_pred C-CEEEEeCCHH
Confidence 5 7999998764
No 199
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=341.45 Aligned_cols=216 Identities=25% Similarity=0.370 Sum_probs=176.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCC-----------------------
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE----------------------- 221 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----------------------- 221 (1106)
..+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999998 8999999875421
Q ss_pred ----CCccceEEEEcCCC-CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHh
Q 001291 222 ----FVPERTAAYISQHD-NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEAN 296 (1106)
Q Consensus 222 ----~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~ 296 (1106)
...++.++||+|++ ..+...||+|||.|+....+.. .++..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------------------------------KEEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------------------------------HHHHH
Confidence 01145799999985 3455689999999976543210 01122
Q ss_pred HHHHHHHHHcCCc-ccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 001291 297 VITDYYLKVLGLD-ICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSG 375 (1106)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~ 375 (1106)
..++.+++.+||+ +..++.+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~~~-----LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSPFE-----LSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3467789999996 677777665 999999999999999999999999999999999999999999998753 3 5
Q ss_pred eEEEEEecChhHHHhhcCeEEEecCCeEEEEcCHHHHHH---HHHhcCCCCC
Q 001291 376 TAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE---FFESMGFKCP 424 (1106)
Q Consensus 376 t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~---~f~~~G~~~p 424 (1106)
.+|+.++|+.+++.++||+|++|++|+++++|+++++.. .+...|...|
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p 267 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDILSDNKFLIENNMEPP 267 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHhcCHHHHHHCCCCCC
Confidence 567778899999999999999999999999999988752 2334455444
No 200
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.3e-36 Score=326.91 Aligned_cols=200 Identities=30% Similarity=0.432 Sum_probs=170.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 35999999999999999999999999999999999999987 9999999988754322 3579999999888889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.++.+..+.. ..+....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03301 90 YDNIAFGLKLRKVP----------------------------------KDEIDERVREVAELLQIEHLLDRKPKQ----- 130 (213)
T ss_pred HHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHHhCChhh-----
Confidence 99999875432210 001123456789999999888888765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|++++... +.+|+.++|+..++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 99999999999999999999999999999999999999999999876533 45566678888899999999999999999
Q ss_pred EEEc
Q 001291 404 VYQG 407 (1106)
Q Consensus 404 v~~G 407 (1106)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 201
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-36 Score=328.46 Aligned_cols=201 Identities=23% Similarity=0.341 Sum_probs=168.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999987 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.+.....+.. . .+....++.+++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------P------------------------AEINSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCchhhhCChh
Confidence 99999999999875432110 0 0112346678999999888777765
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
+ ||||||||++||++++.+|++|||||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++.. +|++++
T Consensus 145 ~-----LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 145 E-----LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 5 9999999999999999999999999999999999999999999987543 34556667788777765 589999
Q ss_pred ecCCeEEEEcCH
Q 001291 398 LSDGQIVYQGPR 409 (1106)
Q Consensus 398 L~~G~iv~~G~~ 409 (1106)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 202
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.5e-36 Score=330.73 Aligned_cols=205 Identities=22% Similarity=0.375 Sum_probs=174.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 36999999999999999999999999999999999999998 9999999988754322 2469999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.+.....+.. . .+....++.+++.+||++..++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 133 (232)
T cd03218 90 LTVEENILAVLEIRGLS----------K------------------------KEREEKLEELLEEFHITHLRKSKASS-- 133 (232)
T ss_pred CcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCChhh--
Confidence 99999999864322110 0 01122456789999999888887765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|+|++|++
T Consensus 134 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 134 ---LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 3 45667778888899999999999999
Q ss_pred CeEEEEcCHHHHH
Q 001291 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999988763
No 203
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=351.09 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=177.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
..+|+|+|++|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|+..+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 46899999999999999999999999999999999999998 9999999998765432 2479999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.|+....+... .+....++++++.+||++..++.+.
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~~ 163 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYPD 163 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCcc
Confidence 999999999999865433210 0112345678999999988888776
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
+ |||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.... +++|++++|+.+++.+++|+|++
T Consensus 164 ~-----LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 164 E-----LSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred c-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEEE
Confidence 5 99999999999999999999999999999999999999999999875433 45666788999999999999999
Q ss_pred ecCCeEEEEcCHHHHH
Q 001291 398 LSDGQIVYQGPRELVL 413 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1106)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999998874
No 204
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=333.97 Aligned_cols=207 Identities=22% Similarity=0.280 Sum_probs=175.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 478899988763 23699999999999999999999999999999999998653 489999998764
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
. ..++.++|++|++.+++..||+||+.+... . ..+..+.++++.+++.+..+..+ .+|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~-----~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK-----G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc-----c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 3 235679999999988888999999987521 0 12345788999999987766653 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
|++|||||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++|||++ ++.+.||++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999864 5899999999987 46788999999985 789998875
Q ss_pred C
Q 001291 1082 G 1082 (1106)
Q Consensus 1082 ~ 1082 (1106)
.
T Consensus 219 ~ 219 (257)
T PRK11247 219 D 219 (257)
T ss_pred c
Confidence 4
No 205
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.7e-36 Score=326.69 Aligned_cols=207 Identities=25% Similarity=0.348 Sum_probs=173.4
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYE 948 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~tv~e 948 (1106)
+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++..|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 469999999999999999999999999999999999865 35899999998754322 256899999998888899999
Q ss_pred HHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCH
Q 001291 949 SLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1106)
Q Consensus 949 ~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~ 1028 (1106)
|+.+....+. .. +..+.++++.+++.+..+..+ ..||+|||||++||||++.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654321 11 234678999999987776653 46999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCchhHHHHHHH
Q 001291 1029 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFE 1093 (1106)
Q Consensus 1029 ~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~yf~ 1093 (1106)
.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|++.+ ...+-+.|.
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~~-~~~~~~~~~ 219 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKINK-SENLEKLFV 219 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChhh-cccHHHHHH
Confidence 9999999999999777999999999987 47788999999985 78999998754 223334443
No 206
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.8e-36 Score=326.97 Aligned_cols=198 Identities=31% Similarity=0.457 Sum_probs=168.7
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC--CccceEEEEcCCCCCCCCCCH
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF--VPERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 243 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999998 99999999887532 124579999999988899999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.+.....+.. ..+....++.+++.+||++..+..+++
T Consensus 96 ~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------------------------------GDELTARLEELADRLGMEELLDRRVGG----- 136 (218)
T ss_pred HHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHHhhhhhh-----
Confidence 99998865432210 001123467789999999888887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
||||||||++||+|++.+|++|+|||||+|||+.++..+.+.|+++.. . +.+++.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 45666678888899999999999999999
Q ss_pred EEEc
Q 001291 404 VYQG 407 (1106)
Q Consensus 404 v~~G 407 (1106)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 207
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.1e-36 Score=327.06 Aligned_cols=211 Identities=24% Similarity=0.319 Sum_probs=171.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++.. .+.+++|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 4567787766421 0124699999999999999999999999999999999998653 5899999998753
Q ss_pred hh---c---cc-ceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 001291 924 QE---T---FA-RISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGL 996 (1106)
Q Consensus 924 ~~---~---~~-~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~L 996 (1106)
.. . ++ +.++|++|++.+++.+|++||+.+....+. .......+.+.++++.+++.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 21 1 22 569999999888888999999987653321 122333456788999999987666653 469
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 997 S~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
|||||||++|||||+.+|+||||||||+|||+.++..+.+.|++++++ |+|||++|||++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999998754 899999999986 34 56899999985 565
Q ss_pred E
Q 001291 1076 V 1076 (1106)
Q Consensus 1076 ~ 1076 (1106)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 208
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-36 Score=339.76 Aligned_cols=219 Identities=23% Similarity=0.287 Sum_probs=178.7
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++.+. ...+.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 56788887764210 0013599999999999999999999999999999999998764 5899999998753
Q ss_pred h-------hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 001291 924 Q-------ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~-------~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~ 994 (1106)
. ...++.+||++|++. ....+|+.||+.|+...+ ....+...+.++++++.++|. +..+..+ .
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSP-----F 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCc-----c
Confidence 2 223457999999973 233579999998764332 223344556788999999997 5666653 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||+|||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.||++++|++ |+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~ 222 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GK 222 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 69999999999999999999999999999999999999999999999777999999999997 47789999999985 78
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (287)
T PRK13641 223 LIKHASPK 230 (287)
T ss_pred EEEeCCHH
Confidence 99988755
No 209
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.3e-36 Score=328.55 Aligned_cols=203 Identities=30% Similarity=0.422 Sum_probs=173.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999998 999999998875321 2356999999988888999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.+..+..+... .+....++.+++.+||++..++.+++
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 133 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRART---- 133 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChhhh----
Confidence 9999998755432100 00112356788999999888887765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+..++.+++|++++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 134 -LSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999998743 3 567778888889999999999999999
Q ss_pred EEEEcCHHHH
Q 001291 403 IVYQGPRELV 412 (1106)
Q Consensus 403 iv~~G~~~~~ 412 (1106)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 210
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.9e-36 Score=331.47 Aligned_cols=215 Identities=24% Similarity=0.303 Sum_probs=176.3
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcCc
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISGY 920 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~ 920 (1106)
+.++|+++.++ +..+++|+||+|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 46778876653 245999999999999999999999999999999999976532 12799999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC----cccccccCCC
Q 001291 921 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----PLRQSLVGLP 991 (1106)
Q Consensus 921 ~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~~ 991 (1106)
+... ...++.++|++|++.+++ .|++||+.+....+. ........+.++++++.+++. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 233567999999988887 999999988654321 122334455688999999997 444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
+.+||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 346999999999999999999999999999999999999999999999876 489999999997 47788999999985
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 219 -G~i~~~~~~~ 228 (247)
T TIGR00972 219 -GELVEYGPTE 228 (247)
T ss_pred -CEEEEeCCHH
Confidence 7899988754
No 211
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.6e-36 Score=332.91 Aligned_cols=215 Identities=24% Similarity=0.304 Sum_probs=178.6
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ +..+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35677877663 24699999999999999999999999999999999998653 5899999997653
Q ss_pred h----------------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccc
Q 001291 924 Q----------------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSL 987 (1106)
Q Consensus 924 ~----------------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~ 987 (1106)
. ...++.++|++|++.+++..|+.||+.++.... ........+..+.++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 1 123567999999998888899999998753211 1123334455688999999998776655
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeE
Q 001291 988 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1066 (1106)
Q Consensus 988 ~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v 1066 (1106)
. .+||+|||||++|||||+.+|++|||||||+|||+.++..+.++|+++.++ |.|||++||+++ ++...||++
T Consensus 144 ~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 P-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred h-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3 469999999999999999999999999999999999999999999998764 899999999997 477889999
Q ss_pred EEEecCCEEEEEecCC
Q 001291 1067 FLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1067 ~~l~~gG~~~~~G~~~ 1082 (1106)
++|++ |++++.|+..
T Consensus 218 ~~l~~-G~i~~~g~~~ 232 (252)
T TIGR03005 218 CFFDK-GRIVEQGKPD 232 (252)
T ss_pred EEEEC-CEEEEeCCHH
Confidence 99985 7899988754
No 212
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.2e-36 Score=333.99 Aligned_cols=207 Identities=23% Similarity=0.362 Sum_probs=174.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|+..++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35999999999999999999999999999999999999997 999999998875432 135699999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||.||+.++...... ... .+....+..+++.+||++..++.+++
T Consensus 97 ~~~tv~enl~~~~~~~~~---------~~~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~ 143 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---------LPA------------------------PLLHSTVMMKLEAVGLRGAAKLMPSE 143 (269)
T ss_pred CCCCHHHHHHHHHHHccC---------CCH------------------------HHHHHHHHHHHHHcCChhhhhCChhh
Confidence 999999999986432100 000 00112356678999999888888765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|++++|+..++.++||+|++|
T Consensus 144 -----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 144 -----LSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSA-LGVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhhCEEEEE
Confidence 9999999999999999999999999999999999999999999987643 3456666788899999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 001291 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 213
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-37 Score=302.39 Aligned_cols=201 Identities=27% Similarity=0.410 Sum_probs=177.4
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHH
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYE 948 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~tv~e 948 (1106)
..+|+|+|++|.+||.++++||||||||||+|+++|..++ ..|.|.+||.++....-. -|.|+|++.+.|.+++.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPgae--rgvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGAE--RGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCcc--ceeEeccCccchhhHHHH
Confidence 3599999999999999999999999999999999998874 589999999987543222 389999999999999999
Q ss_pred HHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCH
Q 001291 949 SLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1028 (1106)
Q Consensus 949 ~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~ 1028 (1106)
|+.|+..++ .+.+.++.+.+.+++..+||.+..++.+ .+||||||||+.|||||+.+|+.|+||||++.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 4667888889999999999999887764 57999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCceEEEEecCccHHHHHhcCeEEEEecC-CEEEEEecCC
Q 001291 1029 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG-GREVYVGPLG 1082 (1106)
Q Consensus 1029 ~~~~~i~~~l~~~~-~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g-G~~~~~G~~~ 1082 (1106)
-+++.++++|-++. ++|+.+++|||+.+ +..-.++++++|..| |+++..=+++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999999886 46999999999987 455578999999854 7888765554
No 214
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2e-36 Score=347.33 Aligned_cols=208 Identities=24% Similarity=0.300 Sum_probs=178.5
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCc----cCCCCCc-------cceEEEE
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGH----NMDEFVP-------ERTAAYI 231 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 231 (1106)
....+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3332211 2479999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccc
Q 001291 232 SQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC 311 (1106)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1106)
+|++.+++.+||+||+.|+....+... .+....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865433210 1112346778999999998
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001291 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1106)
Q Consensus 312 ~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1106)
.|+.+++ |||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++... .+++|++++|+..++.++
T Consensus 158 ~~~~~~~-----LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~-~~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKPGE-----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAK-LNKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHh
Confidence 8888776 9999999999999999999999999999999999999999999987543 356667788999999999
Q ss_pred cCeEEEecCCeEEEEcCHHHHH
Q 001291 392 FDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 392 ~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 215
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-36 Score=333.52 Aligned_cols=219 Identities=22% Similarity=0.258 Sum_probs=179.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ +.++|+|+||+|++|++++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKP--TGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CcceEEECCEEC
Confidence 377888887653 34699999999999999999999999999999999998653 589999999875
Q ss_pred Chh---c-ccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC----------C--CCChHHHHHHHHHHHHHcCCCccccc
Q 001291 923 KQE---T-FARISGYCEQNDIHSPFVTVYESLFYSAWLRLP----------P--EVNSETRKMFIEEVMELVELKPLRQS 986 (1106)
Q Consensus 923 ~~~---~-~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~----------~--~~~~~~~~~~v~~~l~~~~l~~~~~~ 986 (1106)
... . .+..++|++|++.+++.+|+.||+.++...+.. . ..........+.++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 223589999999988889999999886431110 0 00111233467888999999877666
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCe
Q 001291 987 LVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1065 (1106)
Q Consensus 987 ~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~ 1065 (1106)
.+ .+||+|||||++||+||+.+|++|||||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 53 469999999999999999999999999999999999999999999998765 899999999997 57788999
Q ss_pred EEEEecCCEEEEEecCCC
Q 001291 1066 LFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1066 v~~l~~gG~~~~~G~~~~ 1083 (1106)
+++|++ |++++.|+..+
T Consensus 224 i~~l~~-g~i~~~~~~~~ 240 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPEE 240 (255)
T ss_pred EEEEEC-CeEEecCCHHH
Confidence 999985 78999888654
No 216
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.2e-36 Score=330.31 Aligned_cols=226 Identities=25% Similarity=0.299 Sum_probs=181.4
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++++|+|+||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 56777776653 34699999999999999999999999999999999998653 5899999998754
Q ss_pred hh----cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-----CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 924 QE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-----PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~~----~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-----~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.. ..++.++|++|++.+++.+|++||+.+....... .....+..+..++++++.+++.+..+..+ .
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----G 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 21 1234699999999988889999999875421100 00112334556889999999987766653 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
.||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 6999999999999999999999999999999999999999999999865 799999999987 47788999999985 78
Q ss_pred EEEEecCCCc--hhHHHHHH
Q 001291 1075 EVYVGPLGHH--SCHLISYF 1092 (1106)
Q Consensus 1075 ~~~~G~~~~~--~~~~~~yf 1092 (1106)
+++.|+..+. ...+.++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~ 239 (242)
T TIGR03411 220 VLAEGSLDQVQADPRVIEVY 239 (242)
T ss_pred EEeeCCHHHHhcCHHHHHHh
Confidence 9988875432 22355555
No 217
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=336.95 Aligned_cols=214 Identities=23% Similarity=0.314 Sum_probs=177.6
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++..+|+||||+|++||++||+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRP--QKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEECC
Confidence 45677776653 123599999999999999999999999999999999998663 5899999998764
Q ss_pred h----hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 924 Q----ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 924 ~----~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
. ...++.+||++|++. .+...|+.||+.|..... .......++.++++++.+++.+..+..+ ..||+
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 2 233567999999975 355689999998765322 1234444567889999999988777653 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ ++ +.||++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999998877999999999997 45 67999999985 789998
Q ss_pred ecCC
Q 001291 1079 GPLG 1082 (1106)
Q Consensus 1079 G~~~ 1082 (1106)
|+..
T Consensus 217 g~~~ 220 (274)
T PRK13644 217 GEPE 220 (274)
T ss_pred CCHH
Confidence 8754
No 218
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=336.98 Aligned_cols=206 Identities=20% Similarity=0.300 Sum_probs=172.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC-------ccceEEEEcCCC-C
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHD-N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 236 (1106)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999998 999999999875321 245799999985 2
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-cccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
.+...||.||+.|+....+.. ..+....++.+++.+||+ ...++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMN----------------------------------LDEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhCC
Confidence 333469999999875432210 001123467789999997 677776
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+.+ |||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++... .+++|++++|+.+++.+++|+|
T Consensus 143 ~~~-----LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 PFQ-----MSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred ccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 654 9999999999999999999999999999999999999999999987543 4566777889999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998865
No 219
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.2e-36 Score=327.17 Aligned_cols=203 Identities=25% Similarity=0.401 Sum_probs=170.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999999998 9999999988754332 3569999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHc-CCcccccccccCc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVL-GLDICADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 319 (1106)
+||+||+.++....+. . +....++.+++.+ ++++..++.+++
T Consensus 90 ~t~~~~l~~~~~~~~~--~----------------------------------~~~~~~~~~l~~~~~l~~~~~~~~~~- 132 (222)
T cd03224 90 LTVEENLLLGAYARRR--A----------------------------------KRKARLERVYELFPRLKERRKQLAGT- 132 (222)
T ss_pred CcHHHHHHHHhhhcCc--h----------------------------------hHHHHHHHHHHHHHhhhhhhhCchhh-
Confidence 9999999987543210 0 0011234556666 577667776655
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+|++|+
T Consensus 133 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 133 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEee
Confidence 999999999999999999999999999999999999999999998754 3 4566677888899999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 001291 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987763
No 220
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-36 Score=330.24 Aligned_cols=214 Identities=23% Similarity=0.324 Sum_probs=176.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
-+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 377888887663 24699999999999999999999999999999999998653 589999999875
Q ss_pred Chh----cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHc-CCCcccccccCCCCCCCCC
Q 001291 923 KQE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELV-ELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 923 ~~~----~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~-~l~~~~~~~~~~~g~~~LS 997 (1106)
... ..++.++|++|++..++..||.||+.++.... ..+.....++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 13457999999998888899999998764221 1122334567777777 465544443 34699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
+|||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999998877999999999987 57889999999985 78999
Q ss_pred EecCCC
Q 001291 1078 VGPLGH 1083 (1106)
Q Consensus 1078 ~G~~~~ 1083 (1106)
.|+..+
T Consensus 218 ~~~~~~ 223 (237)
T PRK11614 218 EDTGDA 223 (237)
T ss_pred eCCHHH
Confidence 998653
No 221
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=335.82 Aligned_cols=216 Identities=25% Similarity=0.360 Sum_probs=179.4
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++++++. +..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 567888877631 2359999999999999999999999999999999999866 35899999998754
Q ss_pred h---hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 Q---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ...++.+||++|++. .+...||.||+.+..... ....+..++.++++++.+++.+..+..+ ..||+|
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 2 234567899999974 334579999998765322 2334444566889999999987777664 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999997 57789999999985 689999
Q ss_pred ecCCC
Q 001291 1079 GPLGH 1083 (1106)
Q Consensus 1079 G~~~~ 1083 (1106)
|+..+
T Consensus 220 g~~~~ 224 (277)
T PRK13652 220 GTVEE 224 (277)
T ss_pred CCHHH
Confidence 87653
No 222
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-36 Score=324.71 Aligned_cols=198 Identities=28% Similarity=0.410 Sum_probs=169.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 35999999999999999999999999999999999999987 9999999987653 2346799999999888999999
Q ss_pred HHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCC
Q 001291 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgL 324 (1106)
||+.+.....+... .+....++++++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRVEE-----L 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcHhh-----C
Confidence 99998654332100 00123456789999999888877765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEE
Q 001291 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 404 (1106)
||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998754 3 456677888889999999999999999998
Q ss_pred EEc
Q 001291 405 YQG 407 (1106)
Q Consensus 405 ~~G 407 (1106)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 223
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=330.32 Aligned_cols=206 Identities=28% Similarity=0.424 Sum_probs=173.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999999997 9999999988754322 35799999999899999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc--cccccccCc
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI--CADTMVGDE 319 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 319 (1106)
||+||+.++.+..+... .+....+..+++.+||+. ..++.+.+
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~~~~~- 135 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADRYPHE- 135 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhcChhh-
Confidence 99999998754322100 001224567899999985 66666654
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++... .+++|++++|+..++.+++|+|++|+
T Consensus 136 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~-~g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 136 ----LSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQE-LGKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999987653 34566667888888999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 001291 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999988764
No 224
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-36 Score=330.28 Aligned_cols=217 Identities=23% Similarity=0.274 Sum_probs=177.2
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcCc
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISGY 920 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~ 920 (1106)
+.++|+++.++ +..+|+|+||+|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67788877653 246999999999999999999999999999999999976431 35899999998
Q ss_pred cCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc----cccccCCCCC
Q 001291 921 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGLPGV 993 (1106)
Q Consensus 921 ~~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~----~~~~~~~~g~ 993 (1106)
++.. ..+++.+||++|++.+++.+|+.||+.++...+.. ........+.++++++.+++.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7642 23456799999999888889999999876433211 11223345568899999998542 2333 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
.+||||||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.||++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 46999999999999999999999999999999999999999999999864 899999999987 47788999999985 7
Q ss_pred EEEEEecCC
Q 001291 1074 REVYVGPLG 1082 (1106)
Q Consensus 1074 ~~~~~G~~~ 1082 (1106)
++++.|+..
T Consensus 222 ~i~~~g~~~ 230 (250)
T PRK14247 222 QIVEWGPTR 230 (250)
T ss_pred eEEEECCHH
Confidence 899988754
No 225
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.1e-36 Score=329.73 Aligned_cols=218 Identities=22% Similarity=0.249 Sum_probs=173.7
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 5677776653 346999999999999999999999999999999999974111458999999987543
Q ss_pred h---cc-cceEEEEccCCCCCCCCCHHHHHHHhhhhcCCC----CCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCC
Q 001291 925 E---TF-ARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP----EVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNG 995 (1106)
Q Consensus 925 ~---~~-~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~----~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~ 995 (1106)
. .. +..++|++|++..++.+|++|++.+........ ....+...+.+.++++.+++. ...+..+. .+
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 12 234899999999889999999997754322110 012223345678899999997 34454421 24
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHh-cCeEEEEecCCE
Q 001291 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGGR 1074 (1106)
Q Consensus 996 LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~-~D~v~~l~~gG~ 1074 (1106)
||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+... ||++++|++ |+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~ 222 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GR 222 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877999999999997 46666 799999985 78
Q ss_pred EEEEecC
Q 001291 1075 EVYVGPL 1081 (1106)
Q Consensus 1075 ~~~~G~~ 1081 (1106)
+++.|+.
T Consensus 223 i~~~g~~ 229 (243)
T TIGR01978 223 IVKSGDV 229 (243)
T ss_pred EEEecCH
Confidence 9988864
No 226
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-36 Score=330.94 Aligned_cols=214 Identities=29% Similarity=0.397 Sum_probs=174.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999987 999999998876432 135799999999889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++..... +.. ..+ .+.. .......++.+++.+||.+..++.+++
T Consensus 91 ~~~tv~~~l~~~~~~~~-~~~----~~~------~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-STW----RSL------FGLF---------------PKEEKQRALAALERVGLLDKAYQRADQ 144 (241)
T ss_pred ccCcHHHHHHhhhcccc-hhh----hhh------cccC---------------cHHHHHHHHHHHHHcCChhhhCCCccc
Confidence 99999999988643110 000 000 0000 001123456788999998877777654
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++... +++|++++|+.+++.+++|+|++|
T Consensus 145 -----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 145 -----LSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999876433 455666888889999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 001291 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 227
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.4e-36 Score=348.07 Aligned_cols=209 Identities=26% Similarity=0.430 Sum_probs=177.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|.++..... ++.++||+|+..+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999998 9999999998765432 46799999999888999
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++..... + +.. . ...+....++++++.+||.+..++.+.+
T Consensus 93 tv~e~v~~~~~~~~-~-~~~----------------~------------~~~~~~~~v~~~le~vgl~~~~~~~~~~--- 139 (402)
T PRK09536 93 DVRQVVEMGRTPHR-S-RFD----------------T------------WTETDRAAVERAMERTGVAQFADRPVTS--- 139 (402)
T ss_pred CHHHHHHhccchhc-c-ccc----------------C------------CCHHHHHHHHHHHHHcCCchhhcCChhh---
Confidence 99999998642110 0 000 0 0011224578899999999988888765
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
|||||||||.|||||+.+|++|||||||+|||+.++.++.+.|+++++ . +++|+.++|+.+++.++||++++|++|
T Consensus 140 --LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 140 --LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999864 3 456777889999999999999999999
Q ss_pred eEEEEcCHHHHH
Q 001291 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999999864
No 228
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-36 Score=329.16 Aligned_cols=214 Identities=24% Similarity=0.320 Sum_probs=177.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecc
Confidence 56788877663 24699999999999999999999999999999999998653 5899999998642
Q ss_pred ---------hhcccceEEEEccCCCCCCCCCHHHHHHHhh-hhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 001291 924 ---------QETFARISGYCEQNDIHSPFVTVYESLFYSA-WLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1106)
Q Consensus 924 ---------~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~-~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~ 993 (1106)
....++.++|++|++.+++.+|+.||+.+.. ... ..........+.++++.+++.+..+..+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 1123457899999998888899999996532 111 1222334456788999999987766653
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
.+||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 469999999999999999999999999999999999999999999998777999999999987 46778999999985 7
Q ss_pred EEEEEecCC
Q 001291 1074 REVYVGPLG 1082 (1106)
Q Consensus 1074 ~~~~~G~~~ 1082 (1106)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (242)
T PRK11124 218 HIVEQGDAS 226 (242)
T ss_pred EEEEeCCHH
Confidence 899988754
No 229
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.5e-36 Score=325.98 Aligned_cols=206 Identities=26% Similarity=0.377 Sum_probs=172.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc--cceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP--ERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999998 9999999988754322 257999999988888999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.+.....+.. . .+....++.+++.+||+...++.+++
T Consensus 91 ~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~---- 132 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------R------------------------AEARERIAALLARLGLAERADDKVRE---- 132 (236)
T ss_pred HHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhcCChhh----
Confidence 999998765432110 0 00112356788999999888887765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++.. +.+++.++|+.+++. .+|++++|++|+
T Consensus 133 -LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 133 -LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHh-hCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999876433 445666778888876 499999999999
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+++.|+.+++..
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999887754
No 230
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=323.50 Aligned_cols=194 Identities=27% Similarity=0.349 Sum_probs=163.1
Q ss_pred eeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHHHHH
Q 001291 874 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE-TFARISGYCEQNDIHSPFVTVYESLFY 952 (1106)
Q Consensus 874 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~ 952 (1106)
|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.+||++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETP--QSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 99999999999999999999999999999998653 589999999876431 234579999999988888999999987
Q ss_pred hhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHH
Q 001291 953 SAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1032 (1106)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~ 1032 (1106)
....+. .. .+..++.++++++.+++.+..+..+ .+||+|||||++|||||+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 1234456889999999987766653 469999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1033 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1033 ~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
.+++.|+++++ .|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999875 4899999999987 47788999999985 6777643
No 231
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.4e-36 Score=327.44 Aligned_cols=205 Identities=20% Similarity=0.353 Sum_probs=173.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC-----ccceEEEEcCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNHIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 239 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 35999999999999999999999999999999999999988 999999998875421 1357999999988889
Q ss_pred CCCHHHHHHHHHH-hcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 240 EMTVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
.+||+||+.|+.. ..+.. . .+....++++++.+||+...|..+.+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~ 136 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------K------------------------EEAEKQARELLAKVGLAERAHHYPSE 136 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChHHHhcChhh
Confidence 9999999988642 11100 0 01123456788999998877777654
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.. . +++++.++|+.+++.++||++++|
T Consensus 137 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 137 -----LSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998753 3 456667788889999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 001291 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 232
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-36 Score=348.30 Aligned_cols=204 Identities=25% Similarity=0.296 Sum_probs=174.3
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh---c----ccceEEEEccCCC
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE---T----FARISGYCEQNDI 939 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~g~v~q~~~ 939 (1106)
+...+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.++... . .++.+||++|++.
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 344689999999999999999999999999999999998763 589999999876421 1 1346999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001291 940 HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1106)
Q Consensus 940 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illL 1019 (1106)
+++.+||.||+.|....+. ...+..++.+.++++.++|.+..++.+ .+||||||||++|||||+.+|+||||
T Consensus 117 l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999998754431 223444567889999999988777664 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1020 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
||||+|||+.++..+++.|+++.+ .|+|||++|||++ ++.+.||++++|++ |+++..|+..
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~~ 250 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTPD 250 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCHH
Confidence 999999999999999999999875 4899999999997 57788999999985 7899988754
No 233
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-36 Score=331.71 Aligned_cols=228 Identities=25% Similarity=0.327 Sum_probs=182.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTP--QSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCcEEEECCEEhH
Confidence 56778776653 34699999999999999999999999999999999997653 5899999998653
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ...++.++|++|++..++.+|+.||+.++...... .....+.....++++++.+++.+..+..+ ..||+|
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHH
Confidence 2 22345699999998877788999999875321100 01112233456788999999987766653 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777999999999997 57889999999985 6899988
Q ss_pred cCCCc--hhHHHHHHH
Q 001291 1080 PLGHH--SCHLISYFE 1093 (1106)
Q Consensus 1080 ~~~~~--~~~~~~yf~ 1093 (1106)
+..+. ...+.++|+
T Consensus 221 ~~~~~~~~~~~~~~~~ 236 (255)
T PRK11231 221 TPEEVMTPGLLRTVFD 236 (255)
T ss_pred CHHHhcCHHHHHHHhC
Confidence 76542 223445553
No 234
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-36 Score=331.53 Aligned_cols=215 Identities=27% Similarity=0.367 Sum_probs=178.0
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56778877653 3469999999999999999999999999999999999865 35899999998653
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 001291 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gq 1000 (1106)
. ...++.++|++|++.+.+.+|++||+.+..... ....+..+..++++++.+++.+..+..+ .+|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 223456899999988877899999998754221 1122333456789999999987766654 4699999
Q ss_pred HHHHHHHHHHh------cCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 1001 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 1001 rqrl~iA~aL~------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
|||++|||||+ .+|++|+|||||+|||+.++..+++.|+++. ++|+|||++||+++ ++...||++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 67899999999987 47778999999985 7
Q ss_pred EEEEEecCCC
Q 001291 1074 REVYVGPLGH 1083 (1106)
Q Consensus 1074 ~~~~~G~~~~ 1083 (1106)
++++.|+..+
T Consensus 218 ~i~~~~~~~~ 227 (258)
T PRK13548 218 RLVADGTPAE 227 (258)
T ss_pred EEEeeCCHHH
Confidence 8998887643
No 235
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-36 Score=330.51 Aligned_cols=218 Identities=23% Similarity=0.268 Sum_probs=177.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
.++++|+++.++ +..+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 367888887763 246999999999999999999999999999999999986542 3589999999
Q ss_pred ccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKK-----QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~-----~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.++. ...+++.++|++|++.+++.+|+.||+.++...+.. ....+.....++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8753 123456799999999888889999999876533211 1122334456788999998853 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++...||++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 699999999997 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++++.|+..
T Consensus 223 ~-G~i~~~~~~~ 233 (253)
T PRK14267 223 L-GKLIEVGPTR 233 (253)
T ss_pred C-CEEEEeCCHH
Confidence 5 7999998764
No 236
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-36 Score=330.37 Aligned_cols=216 Identities=21% Similarity=0.230 Sum_probs=175.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
.+.++|+++.++ +..+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 478899987763 235999999999999999999999999999999999976532 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC----cccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----PLRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~ 990 (1106)
.++.. ...++.+||++|++..++ .||+||+.++..... .......++.+.++++.+++. +..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999987774 899999988653321 112233455678889998874 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.||++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 35799999999999999999999999999999999999999999999996 4799999999997 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |+++..|+..
T Consensus 224 ~-G~i~~~g~~~ 234 (254)
T PRK14273 224 N-GCIEEESSTD 234 (254)
T ss_pred C-CEEEEeCCHH
Confidence 5 7899988754
No 237
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.9e-36 Score=328.74 Aligned_cols=204 Identities=24% Similarity=0.354 Sum_probs=169.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCC-----CCCCCceeEEEECCccCCCCC-----ccceEEEEcCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKL-----DPSLKVSGRVTYNGHNMDEFV-----PERTAAYISQH 234 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~ 234 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|.++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999999 777 999999998875432 24579999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccc
Q 001291 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.++ .+||+||+.++....+... . .+....++.+++.+||.+..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~----------~-----------------------~~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL----------K-----------------------EELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc----------H-----------------------HHHHHHHHHHHHHcCCChHHhc
Confidence 8777 8999999998754322100 0 0012345678899999877666
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.+. ...|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . ++|++++|+.+++.++||+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 530 134999999999999999999999999999999999999999999998754 3 6677788888999999999
Q ss_pred EEEecCCeEEEEcCHHH
Q 001291 395 IILLSDGQIVYQGPREL 411 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~ 411 (1106)
|++|++|++++.|++++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998764
No 238
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=340.68 Aligned_cols=218 Identities=22% Similarity=0.390 Sum_probs=176.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-------------------Ccc
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------------------VPE 225 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 225 (1106)
.++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++... ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999998 99999999876432 114
Q ss_pred ceEEEEcCCCC-CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHH
Q 001291 226 RTAAYISQHDN-HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLK 304 (1106)
Q Consensus 226 ~~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1106)
+.++||+|++. .+...||+||+.|+....+.. ..+....++.+++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK----------------------------------KSEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 67999999862 333469999999875432110 0011234667899
Q ss_pred HcCCc-ccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEec
Q 001291 305 VLGLD-ICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQ 383 (1106)
Q Consensus 305 ~lgL~-~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q 383 (1106)
.+||+ ...++.+. .|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|++++|
T Consensus 162 ~~gL~~~~~~~~~~-----~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLERSPF-----GLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhcCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 45666554 4999999999999999999999999999999999999999999998753 3 456667888
Q ss_pred ChhHHHhhcCeEEEecCCeEEEEcCHHHHH---HHHHhcCCCCCCC
Q 001291 384 PAPETYNLFDDIILLSDGQIVYQGPRELVL---EFFESMGFKCPKR 426 (1106)
Q Consensus 384 ~~~~~~~~~D~vilL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~ 426 (1106)
+..++.++||+|++|++|++++.|+++++. ..++..|+.+|..
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~ 280 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPRV 280 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCChH
Confidence 888999999999999999999999999875 3345566665543
No 239
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.5e-36 Score=325.48 Aligned_cols=203 Identities=32% Similarity=0.493 Sum_probs=165.9
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC---CCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD---PSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGE 240 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 240 (1106)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|.++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3579999999999999999999999999999999999998 76 99999999887543345679999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHH-HHHHcCCcccccccccCc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDY-YLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~ 319 (1106)
+||+||+.|+......... .. ......++. .++.+++++..++.+++
T Consensus 96 ~tv~enl~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~- 143 (226)
T cd03234 96 LTVRETLTYTAILRLPRKS---SD----------------------------AIRKKRVEDVLLRDLALTRIGGNLVKG- 143 (226)
T ss_pred CcHHHHHHHHHHhhccccc---ch----------------------------HHHHHHHHHHHHHhhcchhhhcccccC-
Confidence 9999999987653321000 00 000112233 78888998777776655
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh-hHHHhhcCeEEEe
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPA-PETYNLFDDIILL 398 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~-~~~~~~~D~vilL 398 (1106)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.++++.+ .+.|+++ ++|.. .++.++||++++|
T Consensus 144 ----LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~i~~l 217 (226)
T cd03234 144 ----ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVIL-TIHQPRSDLFRLFDRILLL 217 (226)
T ss_pred ----cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEE-EecCCCHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998754 3455555 55554 6899999999999
Q ss_pred cCCeEEEEc
Q 001291 399 SDGQIVYQG 407 (1106)
Q Consensus 399 ~~G~iv~~G 407 (1106)
++|+++++|
T Consensus 218 ~~G~i~~~g 226 (226)
T cd03234 218 SSGEIVYSG 226 (226)
T ss_pred eCCEEEecC
Confidence 999999876
No 240
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.5e-36 Score=329.48 Aligned_cols=204 Identities=25% Similarity=0.353 Sum_probs=172.5
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-----------CccceEEEEcCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-----------VPERTAAYISQH 234 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 234 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5999999999999999999999999999999999999987 99999999886532 113579999999
Q ss_pred CCCCCCCCHHHHHHHHHHh-cCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccc
Q 001291 235 DNHIGEMTVRETLAFAARC-QGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICAD 313 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
+.+++.+||+||+.++... .+. . ..+....++.+++.+||+...|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE--P--------------------------------KEEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC--C--------------------------------HHHHHHHHHHHHHHcCCcchhh
Confidence 8888899999999886431 110 0 0011234567889999988777
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
+.+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|++++|+..++.+++|
T Consensus 140 ~~~~~-----LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SYPRR-----LSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVAD 212 (250)
T ss_pred CChhh-----CChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcC
Confidence 77655 999999999999999999999999999999999999999999998754 3 4556667888999999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988764
No 241
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-36 Score=338.75 Aligned_cols=224 Identities=19% Similarity=0.238 Sum_probs=178.4
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC-c-eeEEEEEEcCcc
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGDIRISGYP 921 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~-~-~~~G~i~i~g~~ 921 (1106)
+.++|++..++.+ .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888776432 1124699999999999999999999999999999999997642 2 358999999987
Q ss_pred CChh---cc----cceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCC
Q 001291 922 KKQE---TF----ARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG 992 (1106)
Q Consensus 922 ~~~~---~~----~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g 992 (1106)
+... .. ++.++|++|++. +.|.+|+.+++........ ....++.++.+.++++.++|.+..+.....
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 6421 11 236999999984 6788999988765543221 123445567789999999997532211111
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
+.+|||||||||+|||||+.+|++||+||||+|||+.++..++++|+++.+ .|.|||+||||++ .+.+.||++++|+
T Consensus 151 p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~- 228 (326)
T PRK11022 151 PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMY- 228 (326)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-
Confidence 357999999999999999999999999999999999999999999999976 5899999999997 4678899999998
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
+|++++.|+..
T Consensus 229 ~G~ive~g~~~ 239 (326)
T PRK11022 229 AGQVVETGKAH 239 (326)
T ss_pred CCEEEEECCHH
Confidence 47999999754
No 242
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=4.4e-36 Score=344.44 Aligned_cols=205 Identities=20% Similarity=0.300 Sum_probs=175.6
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCc----cCCh---h---cc-cceEEEEc
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY----PKKQ---E---TF-ARISGYCE 935 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~----~~~~---~---~~-~~~~g~v~ 935 (1106)
+...+|+|+||+|++||+++|+|+||||||||+++|+|...+ ..|+|.++|. +... . .. ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 456799999999999999999999999999999999998763 5899999995 2211 1 12 24699999
Q ss_pred cCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001291 936 QNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPS 1015 (1106)
Q Consensus 936 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~ 1015 (1106)
|++.+++.+||+||+.|+...+ .....+.+..+.++++.++|.+..+..+ .+||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999885433 2334555667899999999988777664 4699999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1016 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1016 illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
||||||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.||++++|++ |+++..|+..+
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~e 251 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPEE 251 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHHH
Confidence 99999999999999999999999999764 899999999997 57889999999985 79999998653
No 243
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.2e-36 Score=331.74 Aligned_cols=221 Identities=26% Similarity=0.349 Sum_probs=180.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc-eeEEEEEEcCcc
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYP 921 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~ 921 (1106)
-+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 367888877653 346999999999999999999999999999999999986542 236999999976
Q ss_pred CCh--------hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-----CCCChHHHHHHHHHHHHHcCCCccccccc
Q 001291 922 KKQ--------ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-----PEVNSETRKMFIEEVMELVELKPLRQSLV 988 (1106)
Q Consensus 922 ~~~--------~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-----~~~~~~~~~~~v~~~l~~~~l~~~~~~~~ 988 (1106)
... ...++.++|++|++.+++.+|+.||+.+......+ .....+..+..++++++.+++.+..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999888889999999875321100 01112334456889999999987666653
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEE
Q 001291 989 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELF 1067 (1106)
Q Consensus 989 ~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~ 1067 (1106)
.+||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ .|.|||++||+++ .+.+.||+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 46999999999999999999999999999999999999999999999975 4899999999997 4778899999
Q ss_pred EEecCCEEEEEecCCC
Q 001291 1068 LMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1068 ~l~~gG~~~~~G~~~~ 1083 (1106)
+|++ |++++.|+..+
T Consensus 225 ~l~~-g~i~~~g~~~~ 239 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQQ 239 (262)
T ss_pred EEEC-CEEEEeCCHHH
Confidence 9985 78999988654
No 244
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-36 Score=333.14 Aligned_cols=216 Identities=27% Similarity=0.383 Sum_probs=177.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCC-CCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1106)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35999999999999999999999999999999999999998 9999999998765322 357999999863 6777
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||.|||.++....+.. ..+....++++++.+||++..++.++.
T Consensus 97 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------------------------------REEMVERVDQALRQVGMEDFLNREPHR-- 140 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCCccc--
Confidence 89999999875432210 001123467789999999888888765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++... .+++|++++|+.+++. .||+|++|++
T Consensus 141 ---LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~-~~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 141 ---LSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQ-KGITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHc-CCCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999987643 3456666777777776 5999999999
Q ss_pred CeEEEEcCHHHHHH---HHHhcCCCCC
Q 001291 401 GQIVYQGPRELVLE---FFESMGFKCP 424 (1106)
Q Consensus 401 G~iv~~G~~~~~~~---~f~~~G~~~p 424 (1106)
|++++.|+.+++.. .+...|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999988753 3444455443
No 245
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-36 Score=335.09 Aligned_cols=215 Identities=25% Similarity=0.298 Sum_probs=179.3
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++. ..+.+|+|+||+|++||++||+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 678888877631 123599999999999999999999999999999999998764 5899999998764
Q ss_pred h---hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 Q---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ...++.+||++|++. .++..||.||+.++.... ....++.++.+.++++.++|.+..+..+ ..||+|
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHH
Confidence 3 233567999999974 556689999998865332 1233444567899999999988777664 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++ ..||++++|++ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999875 899999999987 35 46999999985 789999
Q ss_pred ecCC
Q 001291 1079 GPLG 1082 (1106)
Q Consensus 1079 G~~~ 1082 (1106)
|+..
T Consensus 222 g~~~ 225 (279)
T PRK13635 222 GTPE 225 (279)
T ss_pred CCHH
Confidence 8754
No 246
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5.1e-36 Score=340.74 Aligned_cols=208 Identities=22% Similarity=0.246 Sum_probs=176.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc------cceEEEEcCCC--C
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP------ERTAAYISQHD--N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1106)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 57999999999999999999999999999999999999987 9999999998865431 35799999996 5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-cccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
++|.+||.||+.+..+....+ +. ..+....++.+++.+||. ...++.
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~--------~~------------------------~~~~~~~~~~~l~~vgl~~~~~~~~ 158 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPK--------LS------------------------RQEVKDRVKAMMLKVGLLPNLINRY 158 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccC--------CC------------------------HHHHHHHHHHHHHHcCCChHHhcCC
Confidence 788999999999875432100 00 011223466789999994 466776
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+++ |||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+. .+.+++.++|+...+.+++|+|
T Consensus 159 p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 159 PHE-----FSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 655 9999999999999999999999999999999999999999999988653 3567777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 247
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.3e-36 Score=322.41 Aligned_cols=195 Identities=27% Similarity=0.381 Sum_probs=167.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-CccceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-VPERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999987 99999999876532 123579999999888899999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.+.....+. ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG----- 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh-----
Confidence 9999886532210 012356678999998888887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. . +.+++.++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 45566678888999999999999999999
Q ss_pred EEEc
Q 001291 404 VYQG 407 (1106)
Q Consensus 404 v~~G 407 (1106)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 248
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=327.69 Aligned_cols=220 Identities=22% Similarity=0.282 Sum_probs=174.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCC---CCCceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR---KTGGYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~---~~~~~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|. .++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467788887653 24699999999999999999999999999999999995 22212479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.+... ...++.++|++|++.+++ .|+.||+.++...+. ....+...+.++++++.+++.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNG--VKDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 233557999999988776 699999987653331 111223445678899999986421111111 134
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++.+.||++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 699999999999999999999999999999999999999999999985 5899999999997 47788999999985 78
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 223 ~~~~~~~~ 230 (250)
T PRK14245 223 MVEYDDTK 230 (250)
T ss_pred EEEECCHH
Confidence 99998754
No 249
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5e-36 Score=335.60 Aligned_cols=204 Identities=21% Similarity=0.235 Sum_probs=150.0
Q ss_pred CceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCc
Q 001291 841 PYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY 920 (1106)
Q Consensus 841 ~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 920 (1106)
|-.+.+.+|.+.++- +.-+++.++++.++.-...+++|+||+||||+++++.|...+ ..|.+.+.+
T Consensus 360 ~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~- 425 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP- 425 (582)
T ss_pred CCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc-
Confidence 335777787766541 111688999999999999999999999999999999986542 356555543
Q ss_pred cCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCCCCCHH
Q 001291 921 PKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 921 ~~~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~~LS~G 999 (1106)
+++++|-.|...-+-.+.|.+-- +-...+ +.. .++.+++.+..+||.. ++... ..+||||
T Consensus 426 -------r~ri~~f~Qhhvd~l~~~v~~vd-~~~~~~--pG~----~~ee~r~hl~~~Gl~g~la~~s-----i~~LSGG 486 (582)
T KOG0062|consen 426 -------RLRIKYFAQHHVDFLDKNVNAVD-FMEKSF--PGK----TEEEIRRHLGSFGLSGELALQS-----IASLSGG 486 (582)
T ss_pred -------cceecchhHhhhhHHHHHhHHHH-HHHHhC--CCC----CHHHHHHHHHhcCCCchhhhcc-----ccccCCc
Confidence 45689999976544334443322 212222 111 2334567888999864 33222 3569999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||-||++|.....+|.+|+|||||+.||..+-..+-++|++. +..||+||||.++ +-..|+++.+.++|.-.-..|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999876 4689999999875 777899999998754334455
Q ss_pred cC
Q 001291 1080 PL 1081 (1106)
Q Consensus 1080 ~~ 1081 (1106)
..
T Consensus 563 ~~ 564 (582)
T KOG0062|consen 563 GI 564 (582)
T ss_pred cH
Confidence 43
No 250
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=333.05 Aligned_cols=215 Identities=27% Similarity=0.357 Sum_probs=177.8
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ +++.+|+|+||+|++||++||+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 46778887663 123599999999999999999999999999999999997653 4899999998763
Q ss_pred h-----hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 Q-----ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~-----~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
. ...++.++|++|++. .....|+.||+.++.... ....++....+.++++.++|.++.+..+ .+||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999963 334479999998764321 1223344556889999999988777664 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|.|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999987 47778999999985 78999
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
.|+..
T Consensus 218 ~g~~~ 222 (275)
T PRK13639 218 EGTPK 222 (275)
T ss_pred eCCHH
Confidence 88765
No 251
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=329.14 Aligned_cols=218 Identities=20% Similarity=0.250 Sum_probs=177.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
.+.++|+++.++ +..+|+|+||+|++||++||+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367888887763 246999999999999999999999999999999999976432 2589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.+||++|++.+++..|++||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999888888999999987654321 1123344556788999998842 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 346999999999999999999999999999999999999999999999864 689999999987 4778899999997
Q ss_pred c-----CCEEEEEecCC
Q 001291 1071 R-----GGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~-----gG~~~~~G~~~ 1082 (1106)
+ .|++++.|+..
T Consensus 222 ~~~~~~~g~i~~~~~~~ 238 (258)
T PRK14241 222 LEATGKPGRLVEIDDTE 238 (258)
T ss_pred cccCCCCceEEecCCHH
Confidence 3 58999998754
No 252
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=329.17 Aligned_cols=223 Identities=21% Similarity=0.239 Sum_probs=178.7
Q ss_pred CCceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEE
Q 001291 840 EPYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIR 916 (1106)
Q Consensus 840 ~~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~ 916 (1106)
.+..+.++|++++++ .+++|+|+||+|++||++||+|+||||||||+++|+|...+ .+.+|+|.
T Consensus 17 ~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~ 83 (267)
T PRK14237 17 EEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQIL 83 (267)
T ss_pred CCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEE
Confidence 344689999988763 24699999999999999999999999999999999997642 13589999
Q ss_pred EcCccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCC
Q 001291 917 ISGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLP 991 (1106)
Q Consensus 917 i~g~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~ 991 (1106)
++|.+... ...++.++|++|++.+++ .|++||+.++.... .....+..+..+.++++.+++.+..+.....
T Consensus 84 ~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~- 159 (267)
T PRK14237 84 YRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLHK- 159 (267)
T ss_pred ECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhcC-
Confidence 99987632 123557999999987776 69999998764321 1112334456678899999985321111111
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
.+.+||+|||||++|||||+.+|++|+|||||+|||+.++..+.++|+++. ++.|||++||+++ ++.+.||++++|+
T Consensus 160 ~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~- 236 (267)
T PRK14237 160 SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFY- 236 (267)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEE-
Confidence 235799999999999999999999999999999999999999999999985 4799999999997 5778999999997
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
+|++++.|+..
T Consensus 237 ~G~i~~~g~~~ 247 (267)
T PRK14237 237 LGDLIEYDKTR 247 (267)
T ss_pred CCEEEEeCCHH
Confidence 47999998865
No 253
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.2e-36 Score=330.61 Aligned_cols=213 Identities=27% Similarity=0.362 Sum_probs=173.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999987 999999998875432 145799999998889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++...... .. ... .+. ...+....++.+++.+||.+..+..+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~--~~---~~~------~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKP--TW---RSL------LGR---------------FSEEDKERALSALERVGLADKAYQRADQ 145 (243)
T ss_pred ccccHHHHHhhccccccc--ch---hhh------hcc---------------ccHHHHHHHHHHHHHcCcHhhhcCCccc
Confidence 999999999875321100 00 000 000 0001123466789999998877777654
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||+|++|
T Consensus 146 -----LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 146 -----LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEE
Confidence 9999999999999999999999999999999999999999999987543 3456666888889999999999999
Q ss_pred cCCeEEEEcCHHHH
Q 001291 399 SDGQIVYQGPRELV 412 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1106)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998775
No 254
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=333.06 Aligned_cols=207 Identities=26% Similarity=0.354 Sum_probs=173.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCC--C---CccceEEEEcCCCC-CC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE--F---VPERTAAYISQHDN-HI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 238 (1106)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999998 9999999998741 1 12357999999863 34
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
...||+||+.++....+.. . .+....++++++.+||.+..++.+++
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~ 141 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------E------------------------DEVRKRVDNALKRTGIEHLKDKPTHC 141 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHCCChhhhhCCccc
Confidence 5689999999865432210 0 01123467789999999888887765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+.+++..+||+|++|
T Consensus 142 -----LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 142 -----LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999987653 2456666789999999999999999
Q ss_pred cCCeEEEEcCHHHHHH
Q 001291 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 255
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-36 Score=331.45 Aligned_cols=219 Identities=27% Similarity=0.374 Sum_probs=179.5
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPP--SEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEeh
Confidence 478888887653 24699999999999999999999999999999999998653 579999999765
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.. ..+++.++|++|++.+++.+|+.||+.+....... ........++.++++++.+++.+..+..+ .+|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23455799999998888889999999875321110 00112233456789999999987666653 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999997 57788999999985 78999
Q ss_pred EecCCC
Q 001291 1078 VGPLGH 1083 (1106)
Q Consensus 1078 ~G~~~~ 1083 (1106)
.|+..+
T Consensus 229 ~~~~~~ 234 (265)
T PRK10575 229 QGTPAE 234 (265)
T ss_pred ecCHHH
Confidence 887653
No 256
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-36 Score=331.60 Aligned_cols=219 Identities=22% Similarity=0.296 Sum_probs=180.9
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|++++++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEh
Confidence 578889988764 24699999999999999999999999999999999998653 479999999875
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.. ...++.++|++|++..++..|++||+.++.....+ .....+..+..++++++.+++.+..++.+ ..||+
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCh
Confidence 32 22345699999999888889999999775321110 00112233456789999999987766653 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||++||+++ ++.+.||++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999997 57889999999985 78999
Q ss_pred EecCCC
Q 001291 1078 VGPLGH 1083 (1106)
Q Consensus 1078 ~G~~~~ 1083 (1106)
.|+..+
T Consensus 225 ~g~~~~ 230 (265)
T PRK10253 225 QGAPKE 230 (265)
T ss_pred eCCHHH
Confidence 988654
No 257
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-36 Score=315.41 Aligned_cols=190 Identities=59% Similarity=0.939 Sum_probs=160.5
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.++++|+++.++.+ ..++++|+|+||+|++|++++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 46788888877421 012469999999999999999999999999999999999643224689999999876
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
. ...++.++|++|++.+++.+|++||+.+.... + +||+||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhH
Confidence 4 33456799999998888889999999764210 0 39999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|++|||||+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+++.++...||++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998633567899999998658998865
No 258
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=337.67 Aligned_cols=226 Identities=25% Similarity=0.279 Sum_probs=181.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+..+|++++++...... ...+...+|+||||+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 478888887775321100 001234799999999999999999999999999999999998653 489999999876
Q ss_pred Ch------hcccceEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCC
Q 001291 923 KQ------ETFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGV 993 (1106)
Q Consensus 923 ~~------~~~~~~~g~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~ 993 (1106)
.. ..+++.++|++|++ .+.+.+|+.+++.+..... .....+..++.+.++++.++|.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 32 12456799999998 4678899999987654332 12334455667899999999963 44544 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
.+||||||||++|||||+.+|+|||+||||++||..++..|+++|+++.++ |.|||+||||++ .+.+.||++++|++
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 479999999999999999999999999999999999999999999999764 999999999997 46678999999985
Q ss_pred CEEEEEecCC
Q 001291 1073 GREVYVGPLG 1082 (1106)
Q Consensus 1073 G~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 7999999754
No 259
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-36 Score=317.93 Aligned_cols=180 Identities=43% Similarity=0.745 Sum_probs=155.8
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC---CCCCceeEEEECCccCCCC--CccceEEEEcCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD---PSLKVSGRVTYNGHNMDEF--VPERTAAYISQHDNH 237 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~ 237 (1106)
..+.+|+|+|+.+++|++++|+||||||||||+++|+|.++ |+ +|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 34579999999999999999999999999999999999998 66 99999999987543 224679999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.++.+.. .+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~---------------------------------------------------------~~~~~- 116 (202)
T cd03233 95 FPTLTVRETLDFALRCK---------------------------------------------------------GNEFV- 116 (202)
T ss_pred CCCCcHHHHHhhhhhhc---------------------------------------------------------cccch-
Confidence 99999999998764210 12223
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.++++....+.++++++||+.+++.+++|++++
T Consensus 117 ----~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 117 ----RGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred ----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 3499999999999999999999999999999999999999999999876543567777788888899999999999
Q ss_pred ecCCeEEEEc
Q 001291 398 LSDGQIVYQG 407 (1106)
Q Consensus 398 L~~G~iv~~G 407 (1106)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 260
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9.2e-36 Score=322.13 Aligned_cols=196 Identities=23% Similarity=0.357 Sum_probs=162.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999997 9999999988754322 1469999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.+........ . .+....+..+++.+||++..++.++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------V------------------------KEAKERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCChh
Confidence 88999999999865422110 0 0011235678999999887787776
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
. |||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.+..+ .+|+.++|+..++. .+|+|++
T Consensus 141 ~-----LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 141 E-----LSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELN-TSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred h-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHh-hcCEEEE
Confidence 5 999999999999999999999999999999999999999999998765334 45566677777774 5799999
Q ss_pred ecCCeEE
Q 001291 398 LSDGQIV 404 (1106)
Q Consensus 398 L~~G~iv 404 (1106)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 261
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-36 Score=333.25 Aligned_cols=214 Identities=24% Similarity=0.371 Sum_probs=175.8
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcc
Confidence 45677777653 23599999999999999999999999999999999997663 5899999998753
Q ss_pred h-----hcccceEEEEccCCCC-CCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 Q-----ETFARISGYCEQNDIH-SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~-----~~~~~~~g~v~q~~~~-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
. ...++.+||++|++.. ....|+.||+.+....+ ....+.....++++++.+++.+..+..+ .+||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPI-----QCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCc-----hhCC
Confidence 1 1234579999998753 34468999998764322 1223334456788999999987766553 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
||||||++|||||+.+|+||||||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998877999999999987 47788999999985 78999
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
.|+..
T Consensus 217 ~g~~~ 221 (271)
T PRK13638 217 HGAPG 221 (271)
T ss_pred eCCHH
Confidence 88754
No 262
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.2e-35 Score=322.63 Aligned_cols=213 Identities=25% Similarity=0.364 Sum_probs=174.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++.. .....+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 47888988776421 0113599999999999999999999999999999999998653 589999999875
Q ss_pred Chhc------c-cceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 001291 923 KQET------F-ARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNG 995 (1106)
Q Consensus 923 ~~~~------~-~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~ 995 (1106)
.... . ++.++|++|++.+++.+|+.||+.+....+ .......++.+.++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLR---GESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4211 1 246999999998888899999998764332 1223344567889999999987666653 46
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 996 LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
||+|||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++ |.|||++|||++ .+ +.||++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999987 34 56999999985 67
Q ss_pred EEE
Q 001291 1075 EVY 1077 (1106)
Q Consensus 1075 ~~~ 1077 (1106)
+++
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 764
No 263
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=339.07 Aligned_cols=241 Identities=17% Similarity=0.208 Sum_probs=183.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC--ceeEEEEEEcCcc
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGDIRISGYP 921 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~~~~G~i~i~g~~ 921 (1106)
+.++|++.+|+.+ .+...+|+||||+|++||++||+|+||||||||+++|+|..++ .+..|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788888776432 1235699999999999999999999999999999999997642 2457999999987
Q ss_pred CCh---hc----ccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCC---CChHHHHHHHHHHHHHcCCCcccccccC
Q 001291 922 KKQ---ET----FARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPE---VNSETRKMFIEEVMELVELKPLRQSLVG 989 (1106)
Q Consensus 922 ~~~---~~----~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~---~~~~~~~~~v~~~l~~~~l~~~~~~~~~ 989 (1106)
+.. .. .++.++|++|++. +.+.+||.+++.+......... ......++.+.++++.++|.+..+..-.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 532 11 1246999999986 4677899999875422110000 1112345568899999999753221111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEE
Q 001291 990 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFL 1068 (1106)
Q Consensus 990 ~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~ 1068 (1106)
. +.+|||||||||+|||||+.+|+||||||||+|||+.++..++++|+++.++ |.|||+||||++ .+.+.||++++
T Consensus 155 ~--p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~v 231 (330)
T PRK15093 155 F--PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINV 231 (330)
T ss_pred C--chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEE
Confidence 1 3479999999999999999999999999999999999999999999999864 899999999997 47788999999
Q ss_pred EecCCEEEEEecCCCc----h-hHHHHHHHhCCC
Q 001291 1069 MKRGGREVYVGPLGHH----S-CHLISYFEVCPD 1097 (1106)
Q Consensus 1069 l~~gG~~~~~G~~~~~----~-~~~~~yf~~~~g 1097 (1106)
|++ |++++.|+..+. . ...-.|++++|.
T Consensus 232 m~~-G~ive~g~~~~i~~~p~~~y~~~ll~~~~~ 264 (330)
T PRK15093 232 LYC-GQTVETAPSKELVTTPHHPYTQALIRAIPD 264 (330)
T ss_pred EEC-CEEEEECCHHHHHhCCCCHHHHHHHHhCCc
Confidence 984 799999975431 1 112346677664
No 264
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6e-35 Score=366.40 Aligned_cols=209 Identities=29% Similarity=0.383 Sum_probs=176.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.++|+||+|+|+. +++++|+|+||+|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEc
Confidence 6899999999852 134699999999999999999999999999999999998764 589999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccc-------cccCCCC
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-------SLVGLPG 992 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~~~~g 992 (1106)
++ ..+++.+|||+|++.+++ -|++||+.++.. . .++.++++++.+++.+..+ ..++..|
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~~------~----~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGAP------L----TLDEAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCCC------C----CHHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 54 456788999999998875 699999987521 1 1344778888888876543 3344333
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|++||+++ ..+.||+|++|++
T Consensus 587 -~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~- 659 (686)
T TIGR03797 587 -GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA- 659 (686)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-
Confidence 569999999999999999999999999999999999999999999876 589999999986 4578999999985
Q ss_pred CEEEEEecCC
Q 001291 1073 GREVYVGPLG 1082 (1106)
Q Consensus 1073 G~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 660 G~iv~~G~~~ 669 (686)
T TIGR03797 660 GRVVQQGTYD 669 (686)
T ss_pred CEEEEECCHH
Confidence 7999999854
No 265
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=328.72 Aligned_cols=217 Identities=20% Similarity=0.246 Sum_probs=176.5
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--C-ceeEEEEEEc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRIS 918 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~ 918 (1106)
..+.++|+++.++ +..+|+|+||+|++||+++|+||||||||||+++|+|... + .+.+|+|.++
T Consensus 12 ~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~ 78 (260)
T PRK10744 12 SKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLD 78 (260)
T ss_pred ceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEEC
Confidence 3578899988763 2369999999999999999999999999999999999753 1 1358999999
Q ss_pred CccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccC
Q 001291 919 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVG 989 (1106)
Q Consensus 919 g~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~ 989 (1106)
|.+... ...++.++|++|++.+++ .|++||+.+...... ....+..+++++++++.+++.+ ..+..
T Consensus 79 g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 153 (260)
T PRK10744 79 GENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS-- 153 (260)
T ss_pred CEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC--
Confidence 987531 234567999999988776 899999987643221 1223344456889999999843 23332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEE
Q 001291 990 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1106)
Q Consensus 990 ~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l 1069 (1106)
+.+||+|||||++|||||+.+|+||||||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|
T Consensus 154 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 228 (260)
T PRK10744 154 ---GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFM 228 (260)
T ss_pred ---CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEE
Confidence 34699999999999999999999999999999999999999999999986 4789999999987 477889999999
Q ss_pred ecCCEEEEEecCC
Q 001291 1070 KRGGREVYVGPLG 1082 (1106)
Q Consensus 1070 ~~gG~~~~~G~~~ 1082 (1106)
++ |+++..|+..
T Consensus 229 ~~-G~i~~~g~~~ 240 (260)
T PRK10744 229 YL-GELIEFGNTD 240 (260)
T ss_pred EC-CEEEEeCCHH
Confidence 85 7899988754
No 266
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=8e-36 Score=320.53 Aligned_cols=198 Identities=23% Similarity=0.295 Sum_probs=166.3
Q ss_pred EeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh-hcccceEEEEccCCCCCCCCCHHHH
Q 001291 871 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-ETFARISGYCEQNDIHSPFVTVYES 949 (1106)
Q Consensus 871 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~g~v~q~~~~~~~~tv~e~ 949 (1106)
+++|+||++++|++++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 35799999999999999999999999999999998763 48999999987643 2245679999999988888999999
Q ss_pred HHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHH
Q 001291 950 LFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1106)
Q Consensus 950 l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~ 1029 (1106)
+.+....+. . .....+..++++++.+++.+..++.+ .+||+|||||++|||||+.+|++|+|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 976532211 1 11223456788999999987776653 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec
Q 001291 1030 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP 1080 (1106)
Q Consensus 1030 ~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~ 1080 (1106)
++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999987 46778999999974 78988764
No 267
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=327.16 Aligned_cols=201 Identities=25% Similarity=0.367 Sum_probs=169.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999998 99999999887542 34689999998888899999
Q ss_pred HHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCC
Q 001291 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgL 324 (1106)
||+.++....+.. . .+....++.+++.+||++..++.+++ |
T Consensus 89 e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~-----L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------K------------------------MQRLEIAHQMLKKVGLEGAEKRYIWQ-----L 129 (255)
T ss_pred HHHHhHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHhhCChhh-----C
Confidence 9998865432110 0 00122466789999998877777655 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec--CCe
Q 001291 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS--DGQ 402 (1106)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 402 (1106)
||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.... +++|+.++|+..++..+||+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 9999999999999999999999999999999999999999999875433 4556667888999999999999998 599
Q ss_pred EEEEcCHH
Q 001291 403 IVYQGPRE 410 (1106)
Q Consensus 403 iv~~G~~~ 410 (1106)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99987653
No 268
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-36 Score=333.57 Aligned_cols=219 Identities=24% Similarity=0.323 Sum_probs=175.8
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++... ...+++|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67788887764210 0013599999999999999999999999999999999998653 5899999998753
Q ss_pred h-------hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccccCCCCCC
Q 001291 924 Q-------ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~-------~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~~~~g~~ 994 (1106)
. ...++.++|++|++. .....|++||+.|..... ....+..++.++++++.+++.+ ..+..+ .
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 144 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNP-----F 144 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc-----c
Confidence 2 224567999999863 223469999998764322 1223344456788999999963 445543 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||+|||||++|||||+.+|++|||||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |+
T Consensus 145 ~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 222 (280)
T PRK13649 145 ELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-GK 222 (280)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-CE
Confidence 69999999999999999999999999999999999999999999999777999999999987 47788999999985 78
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (280)
T PRK13649 223 LVLSGKPK 230 (280)
T ss_pred EEEeCCHH
Confidence 99888754
No 269
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.3e-36 Score=321.65 Aligned_cols=192 Identities=28% Similarity=0.355 Sum_probs=162.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCC-CCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDN-HIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 243 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999998 9999999988754223467999999863 3557899
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.++....+. ....++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (205)
T cd03226 90 REELLLGLKELDA--------------------------------------GNEQAETVLKDLDLYALKERHPLS----- 126 (205)
T ss_pred HHHHhhhhhhcCc--------------------------------------cHHHHHHHHHHcCCchhcCCCchh-----
Confidence 9999886432100 012356789999999888887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+++.++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 45566678888899999999999999997
Q ss_pred E
Q 001291 404 V 404 (1106)
Q Consensus 404 v 404 (1106)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 270
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=325.50 Aligned_cols=236 Identities=21% Similarity=0.241 Sum_probs=183.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--Cc-eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 467888887763 2469999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.++.. ..+++.++|++|++.+++..|+.||+.++..... .......++.++++++.+++.......... .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87532 2345679999999988888999999987543221 112223345678889999985421111111 135
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+ +|+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY-MGD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-CCE
Confidence 6999999999999999999999999999999999999999999999975 689999999997 5778999999997 479
Q ss_pred EEEEecCCCc-----hhHHHHHHHhCCC
Q 001291 1075 EVYVGPLGHH-----SCHLISYFEVCPD 1097 (1106)
Q Consensus 1075 ~~~~G~~~~~-----~~~~~~yf~~~~g 1097 (1106)
+++.|+..+. ....-+||...+|
T Consensus 225 i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (252)
T PRK14256 225 LVECGETKKIFTTPEKKQTEDYITGRFG 252 (252)
T ss_pred EEEeCCHHHHHhCCCcHHHHHHHhhccC
Confidence 9999875421 1234567765443
No 271
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.7e-36 Score=325.74 Aligned_cols=212 Identities=26% Similarity=0.317 Sum_probs=172.5
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++++|+|+||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPV--KSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECCC
Confidence 4667776553 34699999999999999999999999999999999998653 58999999987542
Q ss_pred h----cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcC-CCcccccccCCCCCCCCCHH
Q 001291 925 E----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVE-LKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 925 ~----~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~-l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ..++.++|++|++.+++.+|+.||+.+....+. .. ..+..+++++.++ +.+..+.. +.+||+|
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHH
Confidence 1 124569999999988888999999987643321 11 1223567777776 45545554 3469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++...||++++|++ |++++.
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999998764 899999999987 47778999999975 789999
Q ss_pred ecCCCc
Q 001291 1079 GPLGHH 1084 (1106)
Q Consensus 1079 G~~~~~ 1084 (1106)
|+..+.
T Consensus 214 ~~~~~~ 219 (230)
T TIGR03410 214 GAGDEL 219 (230)
T ss_pred CCHHHc
Confidence 886543
No 272
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.9e-36 Score=347.12 Aligned_cols=200 Identities=30% Similarity=0.453 Sum_probs=165.9
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+... +++++||+|++.+| .-|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf-~gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLF-AGT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCccc-ccc
Confidence 7999999999999999999999999999999999999998 9999999999877654 68999999998655 469
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCC------cccccccc
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL------DICADTMV 316 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 316 (1106)
+||||.++.... + ++.+.++++.-|| +...||.+
T Consensus 411 ireNi~l~~~~~-------------------------s---------------~e~i~~al~~a~l~~~v~~p~GLdt~i 450 (559)
T COG4988 411 IRENILLARPDA-------------------------S---------------DEEIIAALDQAGLLEFVPKPDGLDTVI 450 (559)
T ss_pred HHHHhhccCCcC-------------------------C---------------HHHHHHHHHHhcHHHhhcCCCcccchh
Confidence 999999974211 0 0111222333332 45678999
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
|+ .++||||||+|||++|||++.+++++++||||++||.++...|.+.|.++++ ++|+++ ++|.. +...-+|+|+
T Consensus 451 ge-~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHrl-~~~~~~D~I~ 525 (559)
T COG4988 451 GE-GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHRL-EDAADADRIV 525 (559)
T ss_pred cc-CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcCh-HHHhcCCEEE
Confidence 95 6788999999999999999999999999999999999999999999998764 355554 55544 4556789999
Q ss_pred EecCCeEEEEcCHHHHHH
Q 001291 397 LLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1106)
+|++|+++.+|.++++.+
T Consensus 526 vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 526 VLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EecCCceeccCCHHHHhh
Confidence 999999999999999864
No 273
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-35 Score=337.50 Aligned_cols=225 Identities=20% Similarity=0.294 Sum_probs=180.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc-eeEEEEEEcCcc
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYP 921 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~ 921 (1106)
.+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47888888766431 12356999999999999999999999999999999999976532 237999999987
Q ss_pred CCh---hc---cc-ceEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCC
Q 001291 922 KKQ---ET---FA-RISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPG 992 (1106)
Q Consensus 922 ~~~---~~---~~-~~~g~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g 992 (1106)
+.. .. ++ +.++|++|++ .+.+.+|+.+++.+...... ....++..+++.++++.++|.+..+.....
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~-- 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMKMY-- 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhcCC--
Confidence 642 11 22 4699999998 56788999999876543321 223444556788999999997533221112
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEec
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
+.+||||||||++|||||+.+|+|||+||||++||+.++..|+++|+++.++ |.|||+||||++ .+.+.||++++|+
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~- 236 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY- 236 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-
Confidence 3579999999999999999999999999999999999999999999999765 899999999997 4667899999997
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
+|++++.|+..
T Consensus 237 ~G~ive~g~~~ 247 (330)
T PRK09473 237 AGRTMEYGNAR 247 (330)
T ss_pred CCEEEEECCHH
Confidence 57999999754
No 274
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-36 Score=325.16 Aligned_cols=225 Identities=21% Similarity=0.248 Sum_probs=180.8
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++. . ..||||+|++|+++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTP--ASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCeecC
Confidence 467788877641 1 1389999999999999999999999999999998653 5799999998754
Q ss_pred hh-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 924 QE-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 924 ~~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
.. ..++.++|++|++.+++.+|+.||+.+..... .. ..+..+..++++++.+++.+..++.+ ..||+||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~-~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LK-LNAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cC-CCHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 12356999999998888899999997753211 11 12234556889999999988777764 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
|++||||++.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998754 899999999997 47788999999985 789999876
Q ss_pred CC--chhHHHHHHHhC
Q 001291 1082 GH--HSCHLISYFEVC 1095 (1106)
Q Consensus 1082 ~~--~~~~~~~yf~~~ 1095 (1106)
.+ ....+.++|..|
T Consensus 215 ~~~~~~~~~~~~~~~~ 230 (232)
T PRK10771 215 DELLSGKASASALLGI 230 (232)
T ss_pred HHHHhChhHHHHhhcc
Confidence 53 223455666443
No 275
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=336.59 Aligned_cols=208 Identities=20% Similarity=0.236 Sum_probs=176.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCC--C
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHD--N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 236 (1106)
+.+|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999999987 999999999876542 135799999997 5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-cccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
+.+.+||.+++.+..+.... .. ..+....+.++++.+||+ ...++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LS------------------------AAERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CC------------------------HHHHHHHHHHHHHHCCCChHHhcCC
Confidence 88999999999876543210 00 011223567889999996 466777
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+++ |||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+. .+++++.++|+...+..++|+|
T Consensus 152 p~~-----LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 PHM-----FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred Ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 655 9999999999999999999999999999999999999999999987653 3566777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999998853
No 276
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.1e-35 Score=330.03 Aligned_cols=224 Identities=23% Similarity=0.296 Sum_probs=178.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++.....+ ..+++.+|+|+||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKP--AQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 56788887764210000 01235799999999999999999999999999999999998663 5899999998754
Q ss_pred hh------cccceEEEEccCC--CCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 001291 924 QE------TFARISGYCEQND--IHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~--~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~ 994 (1106)
.. ..++.++|++|++ .+.+..|++||+.+...... .......++.+.++++.+++. ...+..+ .
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKLP-----R 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCCh-----h
Confidence 21 1345799999997 35567899999976543211 122233445688999999995 5555543 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
+||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++|||++ .+.+.||++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 69999999999999999999999999999999999999999999998765 899999999997 47778999999984 7
Q ss_pred EEEEEecCC
Q 001291 1074 REVYVGPLG 1082 (1106)
Q Consensus 1074 ~~~~~G~~~ 1082 (1106)
++++.|+..
T Consensus 228 ~i~~~g~~~ 236 (265)
T TIGR02769 228 QIVEECDVA 236 (265)
T ss_pred EEEEECCHH
Confidence 999998764
No 277
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.4e-35 Score=322.35 Aligned_cols=201 Identities=26% Similarity=0.355 Sum_probs=164.7
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCC--CC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHD--NH 237 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999998 999999999876532 235799999997 46
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-ccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMV 316 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1106)
++.+||+||+.+.....+.... + .......+.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~----------~----------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK----------K----------------------EARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH----------H----------------------HHHHHHHHHHHHHCCCChhHhhCCc
Confidence 6789999999986543211000 0 00011124678889995 5667766
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++. ..+.+|+.++|+..++..++|+|+
T Consensus 144 ~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 HE-----LSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQE-ELGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCeEE
Confidence 55 999999999999999999999999999999999999999999998764 324566667888888989999999
Q ss_pred EecCCeEEEEc
Q 001291 397 LLSDGQIVYQG 407 (1106)
Q Consensus 397 lL~~G~iv~~G 407 (1106)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 278
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=323.38 Aligned_cols=212 Identities=27% Similarity=0.395 Sum_probs=177.7
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ .+.+++|+||+|++|++++|+|+||||||||+++|+|..++ ..|.|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 4677776653 24699999999999999999999999999999999998763 47999999987643
Q ss_pred h-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 001291 925 E-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1106)
Q Consensus 925 ~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqr 1003 (1106)
. ..++.+||++|++..++.+|+.||+.+....+. .........++++++.+++.+..+..+ .+||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 1 124578999999988888999999987654321 223334556788999999988777653 4699999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1004 l~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
++|||||+.+|++|+|||||+|||+.++..++++|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999987 47788999999985 789888764
No 279
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.9e-36 Score=320.25 Aligned_cols=194 Identities=29% Similarity=0.416 Sum_probs=164.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35999999999999999999999999999999999999987 999999999876432 135799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++....+.. .......++.+++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 137 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK----------------------------------EREIQRRVGAALRQVGLEHKADAFPEQ 137 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCChhh
Confidence 8999999999875432210 000123456789999998877777765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.++||++++|
T Consensus 138 -----LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 138 -----LSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred -----CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEe
Confidence 999999999999999999999999999999999999999999998753 3 456666788889999999999999
Q ss_pred cCCe
Q 001291 399 SDGQ 402 (1106)
Q Consensus 399 ~~G~ 402 (1106)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 280
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-36 Score=342.93 Aligned_cols=212 Identities=26% Similarity=0.421 Sum_probs=177.2
Q ss_pred CceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCc
Q 001291 841 PYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY 920 (1106)
Q Consensus 841 ~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 920 (1106)
+.+++|+||+++|. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|.|||+
T Consensus 349 ~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~ 413 (591)
T KOG0057|consen 349 GGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQ 413 (591)
T ss_pred CCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCe
Confidence 34699999999885 24469999999999999999999999999999999999765 4799999999
Q ss_pred cCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccccc-------ccCC
Q 001291 921 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQS-------LVGL 990 (1106)
Q Consensus 921 ~~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~~~ 990 (1106)
+++. +.+|+.+|||||+..++. -||.+|+.|+. .... .+++-++.+..++.+...+ .+|.
T Consensus 414 dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas----~eeV~e~~k~a~~hd~i~~l~~GY~T~VGe 483 (591)
T KOG0057|consen 414 DIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSAS----DEEVVEACKRAGLHDVISRLPDGYQTLVGE 483 (591)
T ss_pred eHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcC----HHHHHHHHHHcCcHHHHHhccccchhhHhh
Confidence 8754 567889999999887764 69999999873 2222 2345667777777654333 3454
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
.|- .|||||||||+||||++.+|+|+++|||||+||.++.+.+++.+.+. ..|+|+|+|.|+++ ..+.||+|++|+
T Consensus 484 rG~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l~--ll~~~DkI~~l~ 559 (591)
T KOG0057|consen 484 RGL-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRLD--LLKDFDKIIVLD 559 (591)
T ss_pred ccc-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecch--hHhcCCEEEEEE
Confidence 443 59999999999999999999999999999999999999999999984 46899999999985 578999999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++.+.|+..
T Consensus 560 n-G~v~e~gth~ 570 (591)
T KOG0057|consen 560 N-GTVKEYGTHS 570 (591)
T ss_pred C-CeeEEeccHH
Confidence 6 6899988754
No 281
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=327.09 Aligned_cols=220 Identities=23% Similarity=0.305 Sum_probs=175.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC---CceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~---~~~~~G~i~i~g 919 (1106)
.+.++|++++++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|... +.+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 578899987763 2359999999999999999999999999999999999642 113589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.+... ...++.++|++|++..++ .|+.||+.++...+. ....+..++.++++++.+++.+........ .+.
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 148 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLHE-SAL 148 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-Ccc
Confidence 87532 133567999999988777 599999988653321 112233445678899999985421111111 134
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++. +|+|||++||+++ ++.+.||++++|++ |+
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-GK 225 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-CE
Confidence 699999999999999999999999999999999999999999999985 4799999999997 47788999999985 78
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 226 i~~~g~~~ 233 (253)
T PRK14242 226 LIEVGPTE 233 (253)
T ss_pred EEEeCCHH
Confidence 99888754
No 282
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9.6e-36 Score=329.10 Aligned_cols=218 Identities=28% Similarity=0.389 Sum_probs=177.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ +..+|+|+||+|++||+++|+|+||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcc
Confidence 45677776653 34699999999999999999999999999999999997653 4799999998754
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ...++.++|++|++...+..|+.||+.++...... .........+.+.++++.+++.+..+..+ ..||+|
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 22345689999998777788999999875321100 00112233456789999999987766653 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||++|||||+.+|++++|||||+|||+.+...+++.|+++.++|.|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999997 57789999999985 6899988
Q ss_pred cCCC
Q 001291 1080 PLGH 1083 (1106)
Q Consensus 1080 ~~~~ 1083 (1106)
+..+
T Consensus 220 ~~~~ 223 (256)
T TIGR03873 220 PPRE 223 (256)
T ss_pred CHHH
Confidence 7653
No 283
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-36 Score=321.39 Aligned_cols=196 Identities=30% Similarity=0.446 Sum_probs=167.8
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--ccceEEEEcCCCCCCCCCCH
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--PERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1106)
++|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 6999999999999 99999999999999999999999998 999999998875432 24679999999988999999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.+.....+.. . .+....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (211)
T cd03264 90 REFLDYIAWLKGIP----------S------------------------KEVKARVDEVLELVNLGDRAKKKIGS----- 130 (211)
T ss_pred HHHHHHHHHHhCCC----------H------------------------HHHHHHHHHHHHHCCCHHHHhCchhh-----
Confidence 99999865432210 0 00122456789999999888887765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. + ++++.++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 5677788999999999999999999999
Q ss_pred EEEc
Q 001291 404 VYQG 407 (1106)
Q Consensus 404 v~~G 407 (1106)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 284
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-36 Score=319.75 Aligned_cols=203 Identities=26% Similarity=0.319 Sum_probs=182.7
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh------hcc-cceEEEEccCCCCC
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ------ETF-ARISGYCEQNDIHS 941 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~------~~~-~~~~g~v~q~~~~~ 941 (1106)
..-++|+||+|+.||++.|||-||||||||+++|.++..+ ..|+|.++|.++.. ..+ ++.++.|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiep--t~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEP--TRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCC--CCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 4568999999999999999999999999999999998774 58999999987632 123 35699999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001291 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1106)
Q Consensus 942 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDE 1021 (1106)
|..||.||+.|+..++ ..+++++++++.++++.+||..+.++.+ ++|||||||||.|||||+.+|+||||||
T Consensus 119 PhrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecC
Confidence 9999999999998776 4677889999999999999999998874 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1022 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
|+|+|||--+..+++-|.++.++ .+|||+||||++ +.+.+-|||.+|+ +|+++..|++.+
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 99999999999999999988644 899999999998 6889999999997 689999999875
No 285
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.9e-35 Score=336.32 Aligned_cols=214 Identities=21% Similarity=0.242 Sum_probs=175.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCC--
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHD-- 235 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1106)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742238999999998765432 14799999997
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccc
Q 001291 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+.+.+||.+++.+.....+. .. ..+....+..+++.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~---------~~------------------------~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG---------MS------------------------KAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CC------------------------HHHHHHHHHHHHHHcCCCChHHH-
Confidence 678999999999876543210 00 01112346677899999754322
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
. +.....|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 1 2334569999999999999999999999999999999999999999999988653 3567777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|++++.|+.+++..
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 286
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=325.64 Aligned_cols=220 Identities=20% Similarity=0.255 Sum_probs=174.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC-ceeEEEEEEcCccC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGDIRISGYPK 922 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~-~~~~G~i~i~g~~~ 922 (1106)
+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56777877663 24699999999999999999999999999999999997532 24589999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
.. ...++.++|++|++.+++ .|++||+.++...+.. .......++.++++++.+++.+........ .+.+||+|
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGM-IKNKDEEEALVVDCLQKVGLFEEVKDKLKQ-NALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCc-ccChHHHHHHHHHHHHHcCCChhhhHHhcC-CcccCCHH
Confidence 43 234567999999988776 6999999886543311 011233445678899999995321111111 13469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999987 47788999999985 7999988
Q ss_pred cCC
Q 001291 1080 PLG 1082 (1106)
Q Consensus 1080 ~~~ 1082 (1106)
+..
T Consensus 224 ~~~ 226 (246)
T PRK14269 224 ESK 226 (246)
T ss_pred CHH
Confidence 754
No 287
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=329.61 Aligned_cols=205 Identities=26% Similarity=0.359 Sum_probs=170.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC---ccceEEEEcCCCC-CCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35999999999999999999999999999999999999997 999999999875432 2457999999863 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++....+.. ..+....++++++.+||++..++.++.
T Consensus 99 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 142 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------------------------------PKKMKDIIDDLAKKVGMEDYLDKEPQN-- 142 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCCccc--
Confidence 99999999865422110 001123467789999999888887765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.. .++++|++++|+..++. .+|+|++|++
T Consensus 143 ---LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 143 ---LSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK-TRKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998764 33355555666767764 7999999999
Q ss_pred CeEEEEcCHHHHH
Q 001291 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999988764
No 288
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=327.20 Aligned_cols=194 Identities=22% Similarity=0.303 Sum_probs=166.8
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHH
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5999999999999999999999999999999999999998 9999999976542 2467999999988888899999
Q ss_pred HHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCC
Q 001291 246 TLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLS 325 (1106)
|+.++... . ....++.+++.+||.+..+..+++ ||
T Consensus 101 nl~~~~~~-----------~-----------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS 135 (257)
T PRK11247 101 NVGLGLKG-----------Q-----------------------------WRDAALQALAAVGLADRANEWPAA-----LS 135 (257)
T ss_pred HHHhcccc-----------h-----------------------------HHHHHHHHHHHcCChhHhcCChhh-----CC
Confidence 99875210 0 011345678899998877777655 99
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEE
Q 001291 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 405 (1106)
|||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++.... +.+|++++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999875433 4556667888889999999999999999999
Q ss_pred EcCHH
Q 001291 406 QGPRE 410 (1106)
Q Consensus 406 ~G~~~ 410 (1106)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 289
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=330.49 Aligned_cols=206 Identities=27% Similarity=0.354 Sum_probs=172.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC----ccceEEEEcCCCC-CCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV----PERTAAYISQHDN-HIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999998 999999998875421 2467999999863 344
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
..||.||+.|+....+.. ..+....++++++.+||+...++.++.
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~~~- 144 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------------------------------PEEIRERVDESLKKVGMYEYRRHAPHL- 144 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------------------------------HHHHHHHHHHHHHHCCCHhHhhCCccc-
Confidence 579999999875432210 001123467889999999988888765
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.. +|++++|+
T Consensus 145 ----LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 145 ----LSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 9999999999999999999999999999999999999999999987643 34556666777778765 99999999
Q ss_pred CCeEEEEcCHHHHHH
Q 001291 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998753
No 290
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=336.22 Aligned_cols=211 Identities=20% Similarity=0.229 Sum_probs=173.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCC-ceeEEEECCccCCCCCc-------cceEEEEcCCC-
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLK-VSGRVTYNGHNMDEFVP-------ERTAAYISQHD- 235 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~-~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1106)
.++|+||||+|++||+++|+||||||||||+++|+|++++... .+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 5699999999999999999999999999999999999874221 38999999998765432 13699999987
Q ss_pred -CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc---c
Q 001291 236 -NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI---C 311 (1106)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~ 311 (1106)
.+.|.+||.+++......... . ...+....++.+++.+||++ .
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~---------~------------------------~~~~~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG---------G------------------------NKKTRRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC---------C------------------------CHHHHHHHHHHHHHHCCCCChHHH
Confidence 478999999998776543210 0 00112245677899999974 3
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001291 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1106)
Q Consensus 312 ~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1106)
.+..++ .|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++... .+.+++.++|+...+.++
T Consensus 147 l~~~p~-----~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~ 220 (326)
T PRK11022 147 LDVYPH-----QLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEA 220 (326)
T ss_pred HhCCch-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHh
Confidence 455554 49999999999999999999999999999999999999999999998653 356677789999999999
Q ss_pred cCeEEEecCCeEEEEcCHHHHHH
Q 001291 392 FDDIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 392 ~D~vilL~~G~iv~~G~~~~~~~ 414 (1106)
+|+|++|++|++++.|+.+++.+
T Consensus 221 adri~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 221 AHKIIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred CCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999998853
No 291
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-35 Score=320.44 Aligned_cols=209 Identities=24% Similarity=0.358 Sum_probs=172.2
Q ss_pred ceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC-C--ceeEEEEEEcCccCCh---h---cc-cceEEEEccC
Q 001291 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYITGDIRISGYPKKQ---E---TF-ARISGYCEQN 937 (1106)
Q Consensus 868 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~-~--~~~~G~i~i~g~~~~~---~---~~-~~~~g~v~q~ 937 (1106)
...+++||||++++||++||+|.|||||||+.++|+|..+ + ....|+|.++|.++.. . .+ -+.+++++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 3579999999999999999999999999999999999765 2 3567899999986532 2 22 2469999999
Q ss_pred CC--CCCCCCHHHHHHHhhhhcCCCCC-ChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCC
Q 001291 938 DI--HSPFVTVYESLFYSAWLRLPPEV-NSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANP 1014 (1106)
Q Consensus 938 ~~--~~~~~tv~e~l~~~~~~~~~~~~-~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p 1014 (1106)
+. +.|.+||.+-+.-....+. .. ..++..+.+.++|+.+++.+-....... +.+|||||||||.||.||+.+|
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~--~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y--PhelSGGMrQRV~IAmala~~P 172 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHG--KGLSKKEAKERAIELLELVGIPDPERRLKSY--PHELSGGMRQRVMIAMALALNP 172 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhh--cchhhHHHHHHHHHHHHHcCCCCHHHHHhhC--CcccCCcHHHHHHHHHHHhCCC
Confidence 86 4577888776644333221 12 3455677889999999998754333333 3579999999999999999999
Q ss_pred CeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1015 SIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1015 ~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
++||.||||++||...+++|+++|+++.+ .|.|+|+||||+.. +.+.||||+||+ .|++|+.|+..
T Consensus 173 ~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMY-aG~iVE~g~~~ 239 (316)
T COG0444 173 KLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMY-AGRIVEEGPVE 239 (316)
T ss_pred CEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEE-CcEEEEeCCHH
Confidence 99999999999999999999999999986 69999999999985 889999999998 58999999865
No 292
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=324.10 Aligned_cols=203 Identities=25% Similarity=0.405 Sum_probs=168.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999998 9999999988765432 3569999999888999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHc-CCcccccccccCc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVL-GLDICADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 319 (1106)
+||+||+.++..... . + +....++.+++.+ ++.+..++.++.
T Consensus 95 ~tv~~~l~~~~~~~~---~-~--------------------------------~~~~~~~~~l~~~~~l~~~~~~~~~~- 137 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D--------------------------------QFQERIKWVYELFPRLHERRIQRAGT- 137 (237)
T ss_pred CcHHHHHHHhhhccC---h-h--------------------------------HHHHHHHHHHHHHHHHHHHHhCchhh-
Confidence 999999988642110 0 0 0011234456666 466656665544
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|++++|+
T Consensus 138 ----LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 138 ----MSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-Q-GMTIFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHhhCCEEEEEe
Confidence 999999999999999999999999999999999999999999998754 3 4455667888899999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 001291 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+++++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999998774
No 293
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=315.44 Aligned_cols=196 Identities=31% Similarity=0.590 Sum_probs=161.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc-eeEEEEEEcCcc
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGDIRISGYP 921 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~~~G~i~i~g~~ 921 (1106)
.+.|+|++|.|+.+. +++.+|+|+||+|++||++||+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~~---------~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKGR---------SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccCC---------CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 578999999997541 3457999999999999999999999999999999999976532 568999999987
Q ss_pred CCh--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 922 KKQ--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 922 ~~~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
... ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999998888899999997653210 1222 2469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||||++|||||+.+|++|||||||+|||+.+++.+++.|+++.++ +.|+|+++|+...++.+.||++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 677776665532257789999999985 788775
Q ss_pred e
Q 001291 1079 G 1079 (1106)
Q Consensus 1079 G 1079 (1106)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 4
No 294
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.7e-35 Score=322.80 Aligned_cols=202 Identities=25% Similarity=0.316 Sum_probs=168.4
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC--CccceEEEEc-CCCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF--VPERTAAYIS-QHDNHIG 239 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 239 (1106)
..+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3457999999999999999999999999999999999999998 99999999875332 1245799997 5566778
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.+.....+... ++....++.+++.+||++..|+.+++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~~- 153 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVRQ- 153 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChhh-
Confidence 9999999998654332100 00112356788899999988888765
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+. ++.+|+.++|+.+++.+++|++++|.
T Consensus 154 ----LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 154 ----LSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRE-RGTTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEEecCHHHHHHhCCEEEEEe
Confidence 9999999999999999999999999999999999999999999987653 34556667888889999999999999
Q ss_pred CCeEEEEc
Q 001291 400 DGQIVYQG 407 (1106)
Q Consensus 400 ~G~iv~~G 407 (1106)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 295
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=335.55 Aligned_cols=223 Identities=19% Similarity=0.224 Sum_probs=178.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 919 (1106)
.+.|+|+++.++. +...+|+||||+|++||++||+|+||||||||+++|+|.... .+..|.|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5889999887742 124699999999999999999999999999999999997531 24579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.++.. ...++.++||+|++.+++ .|++||+.|+.... .....+..++.+.++++.++|.+-.+..++.. +.
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~--~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~~ 224 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN--GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-GN 224 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc--CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-cc
Confidence 98742 234567999999988774 79999998864321 11112223344678889888754222223322 34
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||||||||++|||||+.+|+||||||||+|||+.+...+++.|+++++ ++|||++||+++ .+.+.||++++|++ |+
T Consensus 225 ~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G~ 301 (329)
T PRK14257 225 ALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-GW 301 (329)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 6999999999999999999999999999999999999999999999875 799999999997 46778999999985 79
Q ss_pred EEEEecCCC
Q 001291 1075 EVYVGPLGH 1083 (1106)
Q Consensus 1075 ~~~~G~~~~ 1083 (1106)
+++.|++.+
T Consensus 302 i~e~g~~~~ 310 (329)
T PRK14257 302 IEEAGETKT 310 (329)
T ss_pred EEEeCCHHH
Confidence 999998764
No 296
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.3e-35 Score=329.61 Aligned_cols=242 Identities=19% Similarity=0.217 Sum_probs=185.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++++++.+.. +...+..++|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 678899887742110 0000124699999999999999999999999999999999998763 5899999998764
Q ss_pred h---hcccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCC
Q 001291 924 Q---ETFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS 997 (1106)
. ...++.++|++|++. +.+..|+.+++.++...+. ........+.++++++.+++. ...+.. +.+||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 2 122346999999875 4567899999887644321 122334445688999999994 455544 24699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
+|||||++|||||+.+|+||||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++...||++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999997 57778999999984 7899
Q ss_pred EEecCCCc-----hhHHHHHHHhCCCCcc
Q 001291 1077 YVGPLGHH-----SCHLISYFEVCPDAHF 1100 (1106)
Q Consensus 1077 ~~G~~~~~-----~~~~~~yf~~~~g~~~ 1100 (1106)
+.|+..+. ....-.|+++..|..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (267)
T PRK15112 230 ERGSTADVLASPLHELTKRLIAGHFGEAL 258 (267)
T ss_pred ecCCHHHHhcCCCCHHHHHHHHhccCCcc
Confidence 88875431 1223355666555544
No 297
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.2e-36 Score=339.64 Aligned_cols=229 Identities=24% Similarity=0.348 Sum_probs=183.5
Q ss_pred cCCCCCcceEEEeeeEEEEEEecccccCCChhhHhHHHHHHHhhhhhcCCCccccceeeeceeEEEeCceEEEEEcCCCC
Q 001291 110 VGIVLPTVEVRFEHLTIEAEAFLASKALPSFTKFFTTIFEDLLNYLHILPSTKKHLTILKDVSGIVKPGRLTLLLGPPSS 189 (1106)
Q Consensus 110 ~~~~~p~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 189 (1106)
..+..|.=.++|+|++.+-. ++++||+++||+|++|+-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 35566666799999887731 234599999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHh
Q 001291 190 GKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMTVRETLAFAARCQGVGTRYEMLTEL 266 (1106)
Q Consensus 190 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 266 (1106)
||||+|++|.++++ . +|+|.+||.++.+... |+.||||||+..+| +-||.+||.++..-. .++.+.++
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~sa----s~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNPSA----SDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCCCc----CHHHHHHH
Confidence 99999999999998 4 8999999999876554 57899999976555 569999999985321 23334444
Q ss_pred hHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhhhhHHHHHHHHhcCCccce
Q 001291 267 SRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALF 346 (1106)
Q Consensus 267 ~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vll 346 (1106)
|++-. + .|. ...|++..+|.||+.+ +-|||||||||++|||++.+|+|++
T Consensus 461 ~k~a~---~-----------------------hd~---i~~l~~GY~T~VGerG-~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAG---L-----------------------HDV---ISRLPDGYQTLVGERG-LMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcC---c-----------------------HHH---HHhccccchhhHhhcc-cccccchHHHHHHHHHHhcCCCeEE
Confidence 43321 1 111 2357888999999833 3399999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEcCHHHHHH
Q 001291 347 MDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 347 LDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~~~~~~~ 414 (1106)
+|||||.||+.|..++++.+.+. ..++|+|++ .|.. .+..-||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~I-vH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMI-VHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEE-Eecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999873 345565554 4544 4678899999999999999999999975
No 298
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=359.69 Aligned_cols=221 Identities=21% Similarity=0.305 Sum_probs=183.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++++++ ++.+|+||||+|++||++||+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 6 l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 72 (506)
T PRK13549 6 LEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQ 72 (506)
T ss_pred EEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 77888887763 34699999999999999999999999999999999997664335899999998764
Q ss_pred hh----cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 QE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~~----~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
.. ..++.+||++|++.+++.+||+||+.++...+.......+...+.++++++.+++.+..+..+ .+||||
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 147 (506)
T PRK13549 73 ASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLG 147 (506)
T ss_pred CCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHH
Confidence 21 123569999999988888999999988653321111122334456889999999987777664 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||++|||||+.+|+||||||||+|||+.++..+++.|++++++|.|||++|||++ .+.+.||++++|++ |++++.|
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~ 225 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTR 225 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeec
Confidence 999999999999999999999999999999999999999999878999999999987 47788999999985 7899999
Q ss_pred cCCCc
Q 001291 1080 PLGHH 1084 (1106)
Q Consensus 1080 ~~~~~ 1084 (1106)
+..+.
T Consensus 226 ~~~~~ 230 (506)
T PRK13549 226 PAAGM 230 (506)
T ss_pred ccccC
Confidence 87653
No 299
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=325.44 Aligned_cols=210 Identities=26% Similarity=0.337 Sum_probs=173.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ +..+|+|+||+|++|++++|+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDP--TEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEh
Confidence 367888887663 24699999999999999999999999999999999997653 589999999875
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~ 998 (1106)
.. ...++.++|++|++.+++ .|++||+.+....+ . .....+.++++.+++. +..++. +..||+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 32 234567999999987776 69999987653221 1 1124577889999996 455544 346999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 999999999997 47788999999985 78998
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
.|+..
T Consensus 213 ~~~~~ 217 (241)
T PRK14250 213 YAKTY 217 (241)
T ss_pred eCCHH
Confidence 88764
No 300
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=7.2e-36 Score=321.31 Aligned_cols=195 Identities=26% Similarity=0.389 Sum_probs=165.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 46999999999999999999999999999999999999997 999999998875432 235799999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.+.....+.. ..+....++.+++.+||++..++.+++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP----------------------------------PREIRKRVPAALELVGLSHKHRALPAE 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCChhh
Confidence 9999999999875432210 001122456788999999888877765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ . ++++++++|+..++.++||++++|
T Consensus 137 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 137 -----LSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred -----cCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998754 3 456667788888999999999999
Q ss_pred cCCeE
Q 001291 399 SDGQI 403 (1106)
Q Consensus 399 ~~G~i 403 (1106)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 301
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.4e-35 Score=323.73 Aligned_cols=229 Identities=25% Similarity=0.359 Sum_probs=183.7
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++.+|+|+||++.+||+++|+||||||||||+++|+|..++ ..|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 4667766653 24699999999999999999999999999999999998653 58999999987643
Q ss_pred h-cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 001291 925 E-TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1106)
Q Consensus 925 ~-~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqr 1003 (1106)
. ..++.++|++|++..++..|+.||+.+....+. .......+.++++++.+++.+..++.. ..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 224579999999988888999999987654321 222333456789999999987777653 4699999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1004 l~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
++|||||+.+|++++|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|+ .|++++.|+..
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~~ 216 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMS-NGKIEQIGSPD 216 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEecCHH
Confidence 99999999999999999999999999999999999998765 899999999987 4778899999998 47899988865
Q ss_pred Cc-hhHHHHHHHhCCCC
Q 001291 1083 HH-SCHLISYFEVCPDA 1098 (1106)
Q Consensus 1083 ~~-~~~~~~yf~~~~g~ 1098 (1106)
.. .....+|.....|+
T Consensus 217 ~~~~~~~~~~~~~~~~~ 233 (237)
T TIGR00968 217 EVYDHPANPFVMSFLGE 233 (237)
T ss_pred HHHcCCCcHHHHHhccc
Confidence 32 12233444444443
No 302
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=332.31 Aligned_cols=218 Identities=23% Similarity=0.269 Sum_probs=179.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCce-eEEEEEEcCcc
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGDIRISGYP 921 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~-~~G~i~i~g~~ 921 (1106)
.++++|+++.++. ..+++|+||||+|++||++||+||||||||||+++|+|..++.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4778888877631 12359999999999999999999999999999999999765321 13899999987
Q ss_pred CCh---hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 922 KKQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
... ...++.+||++|++. .++..||+||+.|....+ ....++.++.+.++++.++|.+..+..+ ..||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 643 234567999999974 556789999998764322 2234445567889999999988777663 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
+|||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++. + +.||++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 8999999999873 5 67999999985 7999
Q ss_pred EEecCC
Q 001291 1077 YVGPLG 1082 (1106)
Q Consensus 1077 ~~G~~~ 1082 (1106)
+.|+..
T Consensus 223 ~~g~~~ 228 (282)
T PRK13640 223 AQGSPV 228 (282)
T ss_pred EeCCHH
Confidence 998764
No 303
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.6e-35 Score=324.03 Aligned_cols=206 Identities=23% Similarity=0.359 Sum_probs=171.1
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5999999999999999999999999999999999999863 22389999999987532 1245799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----ccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1106)
+ +||+||+.+.....+... ..+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKD---------------------------------KKELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 999999998754322100 001123456788999997 66666
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+..++.+++|+
T Consensus 141 ~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 SALG-----LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 6654 999999999999999999999999999999999999999999998754 3 5667788888999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|+++++|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 304
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3e-35 Score=319.62 Aligned_cols=198 Identities=28% Similarity=0.350 Sum_probs=164.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35999999999999999999999999999999999999998 9999999998765322 2469999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||.||+.+.....+.. ..+....++.+++.+||.+..++.++
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGES----------------------------------SRQSRNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhCChh
Confidence 89999999999865332110 00112346778999999988887776
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
+ ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++... +++|+.++|+..++ +.+|++++
T Consensus 146 ~-----LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~-~~~d~i~~ 218 (228)
T PRK10584 146 Q-----LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREH-GTTLILVTHDLQLA-ARCDRRLR 218 (228)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEE
Confidence 5 99999999999999999999999999999999999999999999875433 44555567777776 55999999
Q ss_pred ecCCeEEEE
Q 001291 398 LSDGQIVYQ 406 (1106)
Q Consensus 398 L~~G~iv~~ 406 (1106)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 305
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.6e-36 Score=289.59 Aligned_cols=198 Identities=28% Similarity=0.401 Sum_probs=169.1
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh------cc-cceEEEEccCCC
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE------TF-ARISGYCEQNDI 939 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~------~~-~~~~g~v~q~~~ 939 (1106)
+...+|++|++.|++||.+|||||||||||||+-+++|...+ .+|+|.+.|+++.+. .+ .+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 456799999999999999999999999999999999998764 489999999986431 22 357999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001291 940 HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1106)
Q Consensus 940 ~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illL 1019 (1106)
+.|++|..||+.....++... .........+.|+.+||.+-.+... .+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGES---SADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEec
Confidence 999999999999888776532 2223345678899999987655543 46999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 1020 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
||||-+||.++...|.+++-.+. +.|.|.|++||||. +...|||.+-|.. |+++.
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 99999999999999999998885 45999999999986 5788999999985 67764
No 306
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.9e-35 Score=367.46 Aligned_cols=211 Identities=27% Similarity=0.395 Sum_probs=175.6
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++|+||+|+|+. .++++|+|+||+|++||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 36899999999863 124699999999999999999999999999999999998764 58999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccc-------cccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-------SLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~~~~ 991 (1106)
.++ ..+++.+|||+|++.++. .|++||+.++. .+.+ ++.++++++..++.+..+ ..++..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 754 456788999999998875 69999997642 1122 334677888888766443 334433
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
| .+||||||||++|||||+++|+||+||||||+||+++++.+++.|++ .++|+|++||+++ ....||++++|++
T Consensus 613 G-~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 G-ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred C-CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 3 56999999999999999999999999999999999999999999976 4899999999986 4577999999985
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 687 -G~i~~~G~~~ 696 (710)
T TIGR03796 687 -GKVVQRGTHE 696 (710)
T ss_pred -CEEEEecCHH
Confidence 7999998753
No 307
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-36 Score=294.93 Aligned_cols=205 Identities=25% Similarity=0.374 Sum_probs=179.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
..+|+|||+.|.+|+.++++||||||||||||+++|+.+|+ .|+|.+||.+++.- ...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~gP--gaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEGP--GAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccCC--CccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999998 99999999987643 34568999999999999999
Q ss_pred HHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCC
Q 001291 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgL 324 (1106)
+|++|+.++.|+++. ++..++.+.+...||+...+.+|-. |
T Consensus 93 dNvafgL~l~Gi~k~----------------------------------~R~~~a~q~l~~VgL~~~~~~~i~q-----L 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA----------------------------------QRREIAHQMLALVGLEGAEHKYIWQ-----L 133 (259)
T ss_pred HHHHHHHHhcCCCHH----------------------------------HHHHHHHHHHHHhCcccccccceEe-----e
Confidence 999999999886421 2234567789999999988888765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec--CCe
Q 001291 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS--DGQ 402 (1106)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~--~G~ 402 (1106)
||||||||.|||||..+|+.|+||||+++||.-++.++..+|-++.+..+ .-++.++|+.+|+.-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tg-k~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETG-KQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhC-CeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 99999999999999999999999999999999999999999988877554 556668999999999999999998 589
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
|+..=+++-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998766654333
No 308
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=329.77 Aligned_cols=204 Identities=26% Similarity=0.380 Sum_probs=171.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCC-CCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDN-HIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~ 239 (1106)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFV 91 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhcc
Confidence 35999999999999999999999999999999999999997 9999999998754321 357999999864 467
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||.||+.|+....+.. ..+....++.+++.+||++..++.+++
T Consensus 92 ~~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~~~- 136 (274)
T PRK13644 92 GRTVEEDLAFGPENLCLP----------------------------------PIEIRKRVDRALAEIGLEKYRHRSPKT- 136 (274)
T ss_pred cchHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCCccc-
Confidence 789999999875432210 001123466789999999888887765
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
|||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++ ..+|+|++|+
T Consensus 137 ----LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~ 209 (274)
T PRK13644 137 ----LSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMD 209 (274)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEE
Confidence 999999999999999999999999999999999999999999998753 3 45566678888887 5799999999
Q ss_pred CCeEEEEcCHHHHH
Q 001291 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 210 ~G~i~~~g~~~~~~ 223 (274)
T PRK13644 210 RGKIVLEGEPENVL 223 (274)
T ss_pred CCEEEEECCHHHHh
Confidence 99999999998864
No 309
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=9.3e-36 Score=323.61 Aligned_cols=198 Identities=24% Similarity=0.377 Sum_probs=165.7
Q ss_pred eeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHH
Q 001291 872 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLF 951 (1106)
Q Consensus 872 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~tv~e~l~ 951 (1106)
|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..... ...+|++|++.+++.+|+.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQP--TSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 5789999999999999999999999999999998653 5899999998764321 12489999998888899999998
Q ss_pred HhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHH
Q 001291 952 YSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1031 (1106)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~ 1031 (1106)
+...... .....+..++.+.++++.+++.+..+..+ .+||||||||++|||||+.+|++|||||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7532111 12223344556789999999987666653 46999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1032 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1032 ~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
..+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999997 57788999999985 788888864
No 310
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=327.16 Aligned_cols=217 Identities=24% Similarity=0.263 Sum_probs=176.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc----cccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~----~~~~~~~ 990 (1106)
.+... ..+++.+||++|++..++ .|+.||+.++...+.. ........+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFP-KSIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCC-CcHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87632 234567999999988776 4999999886543311 11223334567889999999642 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.||++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 789999999987 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++++.|+..
T Consensus 237 ~-G~i~~~g~~~ 247 (267)
T PRK14235 237 L-GNLVEVGDTE 247 (267)
T ss_pred C-CEEEEeCCHH
Confidence 5 7899988753
No 311
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=333.24 Aligned_cols=205 Identities=25% Similarity=0.360 Sum_probs=172.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-------CccceEEEEcCCCC-
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHDN- 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 46999999999999999999999999999999999999998 99999999887432 11357999999862
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-cccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
.+..+||+||+.|+....+.. ..+....++.+++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------------------------------EDEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHhhCC
Confidence 344689999999875432110 001123467789999997 577777
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .+++|+.++|+.+++.++||+|
T Consensus 143 ~~~-----LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~--~g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 PFE-----LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK--AGHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh--CCCEEEEEeCCHHHHHHhCCEE
Confidence 765 999999999999999999999999999999999999999999998743 3566777899999999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988775
No 312
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-36 Score=342.52 Aligned_cols=195 Identities=24% Similarity=0.378 Sum_probs=171.2
Q ss_pred ceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-------CccceEEEEcCCCCCCCCCC
Q 001291 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1106)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|+..+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999886431 12467999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.|+.+.. ....++.+++.+||++..++.+++
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 128 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYPGS---- 128 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCccc----
Confidence 999999863200 012356789999999888887765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++..++|+|++|++|+
T Consensus 129 -LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999987653 34566778899999999999999999999
Q ss_pred EEEEcCHHHHH
Q 001291 403 IVYQGPRELVL 413 (1106)
Q Consensus 403 iv~~G~~~~~~ 413 (1106)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999885
No 313
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=328.50 Aligned_cols=217 Identities=24% Similarity=0.291 Sum_probs=179.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++. ..+.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 4788999877641 113589999999999999999999999999999999998663 589999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.. ...++.++|++|++. .++..|+.+|+.|..... ....+...+.++++++.+++.+..+..+ .+||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 42 234567999999975 566789999998764322 1223344556789999999987766653 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++. .||++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999997 455 4999999985 79999
Q ss_pred EecCCC
Q 001291 1078 VGPLGH 1083 (1106)
Q Consensus 1078 ~G~~~~ 1083 (1106)
.|+..+
T Consensus 223 ~g~~~~ 228 (269)
T PRK13648 223 EGTPTE 228 (269)
T ss_pred ecCHHH
Confidence 988654
No 314
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=329.35 Aligned_cols=216 Identities=22% Similarity=0.253 Sum_probs=175.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 919 (1106)
.+.++|+++.++ +..+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 13 ~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999987763 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKK-----QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~-----~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+.. ....++.++|++|++.+++ .|++||+.+....+. .. ...++.+.++++.+++.. ..+..
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 151 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES--- 151 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC---
Confidence 8653 1234557999999988777 599999988654321 11 223445677888888742 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|||||||+|||+.++..++++|+++++ ++|||++||+++ ++.+.||++++|+
T Consensus 152 --~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 227 (269)
T PRK14259 152 --GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFN 227 (269)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 346999999999999999999999999999999999999999999999854 799999999997 5788999999998
Q ss_pred c----------CCEEEEEecCCC
Q 001291 1071 R----------GGREVYVGPLGH 1083 (1106)
Q Consensus 1071 ~----------gG~~~~~G~~~~ 1083 (1106)
+ +|++++.|+.++
T Consensus 228 ~~~~~~~~~g~~g~~~~~~~~~~ 250 (269)
T PRK14259 228 AEEVEGGSGGKVGYLVEFNETKK 250 (269)
T ss_pred ccccccccccccceEEEeCCHHH
Confidence 5 367999988653
No 315
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=331.32 Aligned_cols=220 Identities=21% Similarity=0.286 Sum_probs=179.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
-+.++|+++.++... ....+.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEec
Confidence 367888888774210 00124699999999999999999999999999999999998663 589999999876
Q ss_pred Ch----hcccceEEEEccCCCC-CCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 923 KQ----ETFARISGYCEQNDIH-SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 923 ~~----~~~~~~~g~v~q~~~~-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. ...++.+||++|++.. ....|+.|++.|+.... .......++.++++++.++|.+..+..+ .+||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 146 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLS 146 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCC
Confidence 43 2345679999999742 33468999998875322 2233444567899999999988777664 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++. .||++++|++ |+++
T Consensus 147 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~ 223 (280)
T PRK13633 147 GGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVV 223 (280)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999975 4999999999997 354 4999999985 7899
Q ss_pred EEecCC
Q 001291 1077 YVGPLG 1082 (1106)
Q Consensus 1077 ~~G~~~ 1082 (1106)
+.|+..
T Consensus 224 ~~g~~~ 229 (280)
T PRK13633 224 MEGTPK 229 (280)
T ss_pred EecCHH
Confidence 988754
No 316
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-35 Score=327.79 Aligned_cols=205 Identities=24% Similarity=0.353 Sum_probs=169.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC-------ccceEEEEcCCCC-
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDN- 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1106)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999998 999999998875421 1356999999862
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-cccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
.+...||+||+.|.....+.. . .+....++.+++.+||. ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS----------Q------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 333479999999865432110 0 01122356778899997 456666
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+++ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|++++|+..++.+++|++
T Consensus 143 ~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 PFE-----LSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 654 999999999999999999999999999999999999999999998754 3 456666788888999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999998774
No 317
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=328.10 Aligned_cols=220 Identities=26% Similarity=0.349 Sum_probs=177.0
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc------eeEEEEEE
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGDIRI 917 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~------~~~G~i~i 917 (1106)
+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 45677776553 346999999999999999999999999999999999976532 12799999
Q ss_pred cCccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 001291 918 SGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1106)
Q Consensus 918 ~g~~~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~ 993 (1106)
+|.+... ..+++.++|++|++...+.+|+.||+.+....+.. .....+..++.++++++.+++.+..+..+
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~----- 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV----- 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 9987532 23445689999998766668999999875321110 11111234456789999999987766553
Q ss_pred CCCCHHHHHHHHHHHHHh---------cCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhc
Q 001291 994 NGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1063 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~---------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~ 1063 (1106)
..||+|||||++|||||+ .+|++|+|||||+|||+.++..+++.|+++.++ |.|||++||+++ ++.+.|
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 469999999999999999 599999999999999999999999999998765 899999999987 477789
Q ss_pred CeEEEEecCCEEEEEecCCC
Q 001291 1064 DELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1064 D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
|++++|++ |++++.|+..+
T Consensus 223 d~i~~l~~-G~i~~~g~~~~ 241 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPAD 241 (272)
T ss_pred CEEEEEEC-CeEEEecCHHH
Confidence 99999985 78999987653
No 318
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=325.52 Aligned_cols=206 Identities=33% Similarity=0.510 Sum_probs=173.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999999987 9999999987654322 35699999998887889
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++....+. . . .+....++.+++.+||++..++.+++
T Consensus 92 tv~e~l~~~~~~~~~-~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~--- 134 (258)
T PRK13548 92 TVEEVVAMGRAPHGL-S---------R------------------------AEDDALVAAALAQVDLAHLAGRDYPQ--- 134 (258)
T ss_pred CHHHHHHhhhcccCC-C---------c------------------------HHHHHHHHHHHHHcCCHhHhcCCccc---
Confidence 999999986432110 0 0 00112356789999999888887765
Q ss_pred CCCChhhhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 322 RGVSGGQKKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~------~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
|||||||||+||+||+ .+|++|+|||||+|||+.++..+.+.|+++.+.. +.+|++++|+..++.++||+|
T Consensus 135 --LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 135 --LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred --CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEE
Confidence 9999999999999999 5999999999999999999999999999876333 456666788889999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999988764
No 319
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.7e-35 Score=324.80 Aligned_cols=206 Identities=23% Similarity=0.314 Sum_probs=173.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC----------------ccceE
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV----------------PERTA 228 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~ 228 (1106)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 36999999999999999999999999999999999999997 999999998774321 14579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHh-cCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcC
Q 001291 229 AYISQHDNHIGEMTVRETLAFAARC-QGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLG 307 (1106)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1106)
+|++|++.+++.+||.||+.++... .+.. ..+....++.+++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------------------------------RAEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 9999999889999999999886421 1100 0011123567889999
Q ss_pred CcccccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhH
Q 001291 308 LDICADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPE 387 (1106)
Q Consensus 308 L~~~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~ 387 (1106)
|++..+..+.+ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++++.++|+..+
T Consensus 136 l~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHMPAQ-----LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcChhh-----cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHH
Confidence 98887776654 9999999999999999999999999999999999999999999987653 35667778888899
Q ss_pred HHhhcCeEEEecCCeEEEEcCHHHHH
Q 001291 388 TYNLFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 388 ~~~~~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999988764
No 320
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=329.44 Aligned_cols=216 Identities=23% Similarity=0.309 Sum_probs=178.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++. +++++|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 4788888877631 134699999999999999999999999999999999998653 489999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.. ..+++.+||++|++. .++..|++||+.+..... ....+..+..+.++++.+++.+..+..+ ..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567999999974 556789999998764321 1223344556889999999987777654 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ ++|||++||+++. + ..||++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998766 5999999999973 5 57999999985 78988
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
.|+..
T Consensus 223 ~g~~~ 227 (271)
T PRK13632 223 QGKPK 227 (271)
T ss_pred ecCHH
Confidence 88754
No 321
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=332.50 Aligned_cols=220 Identities=20% Similarity=0.290 Sum_probs=176.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++... .....+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 478899988774210 0013599999999999999999999999999999999998653 579999999765
Q ss_pred C--------hhcccceEEEEccCCCC-CCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCC
Q 001291 923 K--------QETFARISGYCEQNDIH-SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPG 992 (1106)
Q Consensus 923 ~--------~~~~~~~~g~v~q~~~~-~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g 992 (1106)
. ....++.++|++|++.. ....|++||+.|..... ....+.....+.++++.++|. +..+..+
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~---- 148 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP---- 148 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh----
Confidence 2 12345679999999742 22369999998764321 122334445678899999994 5555543
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
..||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.||++++|++
T Consensus 149 -~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 149 -FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999875 4899999999997 57789999999985
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 227 -G~i~~~g~~~ 236 (289)
T PRK13645 227 -GKVISIGSPF 236 (289)
T ss_pred -CEEEEeCCHH
Confidence 7899888754
No 322
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=325.62 Aligned_cols=216 Identities=21% Similarity=0.263 Sum_probs=174.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--Cc-eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 378889887663 2469999999999999999999999999999999999754 21 1479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc----cccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~----~~~~~~~ 990 (1106)
.+... ...++.+||++|++.+++. |++||+.|...... ....++..+.++++++.+++.+. .+..
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87531 2335679999999887774 99999987643321 11223344567788999988542 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
..+||+|||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 799999999997 5778899999997
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |+++..|+..
T Consensus 229 ~-G~i~~~g~~~ 239 (259)
T PRK14274 229 M-GELVECNDTN 239 (259)
T ss_pred C-CEEEEECCHH
Confidence 5 7999998754
No 323
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=324.24 Aligned_cols=206 Identities=19% Similarity=0.296 Sum_probs=167.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 35999999999999999999999999999999999998751 01289999999886432 123579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----cccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1106)
++ +||+||+.|+.+..+.. . .+....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN----------K------------------------KDLDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCCcchhhhhc
Confidence 77 89999999875432210 0 00112356678888884 3455
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
+.+++ |||||||||+||+||+.+|+++||||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.++||
T Consensus 150 ~~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~~-~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 SPALS-----LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--KD-YTIVIVTHNMQQAARISD 221 (258)
T ss_pred CChhh-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--hC-CEEEEEECCHHHHHHhCC
Confidence 55544 99999999999999999999999999999999999999999999874 23 566778888999999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|++++.|+++++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 324
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=5.4e-34 Score=369.03 Aligned_cols=134 Identities=20% Similarity=0.236 Sum_probs=107.5
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHh---cCCCe
Q 001291 941 SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNGLSTEQRKRLTIAVELV---ANPSI 1016 (1106)
Q Consensus 941 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~-~~~~~~~~g~~~LS~Gqrqrl~iA~aL~---~~p~i 1016 (1106)
+...||.|+|.++..-........++..+.+ ++++.++|..+ .+... .+||||||||++||++|+ .+|++
T Consensus 760 ~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~L 833 (1809)
T PRK00635 760 YKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPTL 833 (1809)
T ss_pred cCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCCE
Confidence 4457899999877542211112233344455 58889999875 45553 469999999999999998 69999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe-----cCCEEEEEecCC
Q 001291 1017 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGREVYVGPLG 1082 (1106)
Q Consensus 1017 llLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~-----~gG~~~~~G~~~ 1082 (1106)
|||||||+|||+.+...++++|++++++|.|||+++|+++. + +.+|++++|. .||+++..|++.
T Consensus 834 LILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~-i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 834 YVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHV-V-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999998889999999999873 5 8999999995 368999999764
No 325
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-35 Score=324.24 Aligned_cols=228 Identities=20% Similarity=0.215 Sum_probs=180.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
-+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 367788877653 246999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.+||++|++.+++ .|++||+.|...... ..........++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHG--IKDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 123567999999988776 899999987653321 1122334456788999998753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 346999999999999999999999999999999999999999999999876 699999999997 5778899999997
Q ss_pred cCCEEEEEecCCCc-----hhHHHHHHHh
Q 001291 1071 RGGREVYVGPLGHH-----SCHLISYFEV 1094 (1106)
Q Consensus 1071 ~gG~~~~~G~~~~~-----~~~~~~yf~~ 1094 (1106)
+ |++++.|+..+. ...+.+||+.
T Consensus 221 ~-G~i~~~~~~~~~~~~~~~~~~~~~~~~ 248 (251)
T PRK14270 221 M-GDLIEFNKTEKIFLEPQKKETEDYISG 248 (251)
T ss_pred C-CeEEEeCCHHHHhcCCCChHHHHhhcc
Confidence 5 789999876532 1234556644
No 326
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.4e-35 Score=321.63 Aligned_cols=202 Identities=30% Similarity=0.426 Sum_probs=167.5
Q ss_pred CCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh--hcccceEEEEc-cCCCCCC
Q 001291 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCE-QNDIHSP 942 (1106)
Q Consensus 866 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~g~v~-q~~~~~~ 942 (1106)
++.+++|+|+||+|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++ |.+.+++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 31 YREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3456799999999999999999999999999999999997653 58999999976432 23455789997 5556677
Q ss_pred CCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCC
Q 001291 943 FVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1022 (1106)
Q Consensus 943 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEP 1022 (1106)
.+|++|++.+....+ ....+.....+.++++.+++.+..+..+ .+||+|||||++||+||+.+|++|+||||
T Consensus 109 ~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEP 180 (236)
T cd03267 109 DLPVIDSFYLLAAIY---DLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEP 180 (236)
T ss_pred CCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 899999998765432 1223334456788999999987777654 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1023 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1023 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|+|||+.+++.+.+.|++++++ |+|||++||+++ ++.+.||++++|.+ |++++.|
T Consensus 181 t~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 181 TIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999998764 899999999987 47788999999985 6887654
No 327
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=323.96 Aligned_cols=221 Identities=23% Similarity=0.312 Sum_probs=175.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 36999999999999999999999999999999999999998 9999999998754322 2358999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++....... +...... + .+. . .....+....++.+++.+||+...++.+++
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~------~-~~~--~-------~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~-- 153 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLL------K-TPA--F-------RRAESEALDRAATWLERVGLLEHANRQAGN-- 153 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhc------c-ccc--c-------ccchhHHHHHHHHHHHhCChhhhhhCChhh--
Confidence 99999999864321000 0000000 0 000 0 000011223466788999998888877765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+ ..+++|+.++|+..++.++||++++|++
T Consensus 154 ---LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 154 ---LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998754 3345666778889999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 001291 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+++++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999988764
No 328
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=325.27 Aligned_cols=217 Identities=22% Similarity=0.281 Sum_probs=176.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc-e--eEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~-~--~~G~i~i~g 919 (1106)
.+.++|+++.++ +..+|+|+||+|++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478889887763 246999999999999999999999999999999999975532 2 479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.++|++|++.+++ .|++||+.++...+. .......++.+.++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 223457999999988877 899999987654331 1122333456778899988843 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 357999999999999999999999999999999999999999999999865 699999999998 5788999999997
Q ss_pred c----CCEEEEEecCC
Q 001291 1071 R----GGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~----gG~~~~~G~~~ 1082 (1106)
. .|++++.|+..
T Consensus 224 ~~~~~~G~i~~~~~~~ 239 (259)
T PRK14260 224 TDESRIGQMVEFGVTT 239 (259)
T ss_pred ccCCCCceEEEeCCHH
Confidence 3 48999998865
No 329
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-35 Score=323.90 Aligned_cols=206 Identities=21% Similarity=0.355 Sum_probs=173.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 36999999999999999999999999999999999999998 9999999988754332 3569999999988899
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.+..+..+. .. ..+....++.+++.+||++..+..++.
T Consensus 93 ~tv~enl~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (241)
T PRK10895 93 LSVYDNLMAVLQIRDD---------LS------------------------AEQREDRANELMEEFHIEHLRDSMGQS-- 137 (241)
T ss_pred CcHHHHHhhhhhcccc---------cC------------------------HHHHHHHHHHHHHHcCCHHHhhcchhh--
Confidence 9999999876432110 00 001123456788999998877776654
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||++++.+|++|+|||||+|||+.++..+.+.++.+.. . +.+++.++|+..++.+++|++++|++
T Consensus 138 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 138 ---LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeC
Confidence 999999999999999999999999999999999999999999988753 3 45566677888899999999999999
Q ss_pred CeEEEEcCHHHHH
Q 001291 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 330
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=2e-35 Score=315.99 Aligned_cols=189 Identities=23% Similarity=0.346 Sum_probs=160.5
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC---h----hcccceEEEEccCCCCC
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK---Q----ETFARISGYCEQNDIHS 941 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~g~v~q~~~~~ 941 (1106)
+++|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKF--DSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 4699999999999999999999999999999999998663 5899999998742 1 12346799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001291 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1106)
Q Consensus 942 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDE 1021 (1106)
+..|++||+.+....+ ........+.++++++.+++.+..+..+ .+||+|||||++|||||+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8899999998865332 1223344556889999999987766653 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEE
Q 001291 1022 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1106)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l 1069 (1106)
||+|||+.++..+.+.|+++.++|.|||++||+++ ..+.||++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999986 34689999875
No 331
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.1e-35 Score=339.96 Aligned_cols=199 Identities=25% Similarity=0.419 Sum_probs=171.9
Q ss_pred ceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-------CccceEEEEcCCCCCCCCCC
Q 001291 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-------VPERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1106)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999998 99999999887432 12467999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.|+.+... . .+....++++++.+||++..|+.+++
T Consensus 92 v~enl~~~~~~~~------------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~~~---- 131 (354)
T TIGR02142 92 VRGNLRYGMKRAR------------P------------------------SERRISFERVIELLGIGHLLGRLPGR---- 131 (354)
T ss_pred HHHHHHHHhhccC------------h------------------------hHHHHHHHHHHHHcCChhHhcCChhh----
Confidence 9999998753210 0 00122457789999999888888765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 132 -LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 132 -LSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999999999999876533 4566678889999999999999999999
Q ss_pred EEEEcCHHHHH
Q 001291 403 IVYQGPRELVL 413 (1106)
Q Consensus 403 iv~~G~~~~~~ 413 (1106)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999998874
No 332
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=325.83 Aligned_cols=205 Identities=27% Similarity=0.353 Sum_probs=171.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCC--C---CccceEEEEcCCCC-CC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE--F---VPERTAAYISQHDN-HI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 238 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35999999999999999999999999999999999999998 9999999998742 1 11357999999864 34
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
...|+.||+.+.....+.. . .+....++.+++.+||++..++.+++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 136 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP----------E------------------------AEITRRVDEALTLVDAQHFRHQPIQC 136 (271)
T ss_pred ccccHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhcCCchh
Confidence 5678999998865432110 0 01112356788999998888887765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|++++|
T Consensus 137 -----LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 137 -----LSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998754 3 455667889999999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 001291 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998764
No 333
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=322.08 Aligned_cols=203 Identities=26% Similarity=0.346 Sum_probs=170.3
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCC------C---CccceEEEEcCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE------F---VPERTAAYISQHDN 236 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 236 (1106)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999999987 9999999987631 0 11357999999998
Q ss_pred CCCCCCHHHHHHHHH-HhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccc
Q 001291 237 HIGEMTVRETLAFAA-RCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
+++.+||+||+.+.. ...+.. . .+....++.+++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS----------K------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 999999999997532 221110 0 00122456788999998888877
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+++ ||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. . +++++.++|+..++.+++|++
T Consensus 139 ~~~-----LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 PLH-----LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred hhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEE
Confidence 765 999999999999999999999999999999999999999999998743 3 456667788888999999999
Q ss_pred EEecCCeEEEEcCHHHH
Q 001291 396 ILLSDGQIVYQGPRELV 412 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~ 412 (1106)
++|.+|+++++|+++++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999998764
No 334
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=329.14 Aligned_cols=217 Identities=23% Similarity=0.297 Sum_probs=179.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++.. ....+|+|+||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEE--FEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCCEEEECCEEC
Confidence 47788988876420 123599999999999999999999999999999999998763 589999999876
Q ss_pred Ch---hcccceEEEEccCCC-CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDI-HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~-~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.. ...++.+||++|++. .++..|+.||+.++.... ....+...+.++++++.+++.+..+..+ ..||+
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567999999974 566789999998764322 1223344456789999999987766653 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||++|||||+.+|+||||||||+|||+.++..+++.|++++++ |+|||++||+++. + ..||++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 9999999999874 5 46999999985 68999
Q ss_pred EecCC
Q 001291 1078 VGPLG 1082 (1106)
Q Consensus 1078 ~G~~~ 1082 (1106)
.|+..
T Consensus 221 ~g~~~ 225 (277)
T PRK13642 221 EAAPS 225 (277)
T ss_pred eCCHH
Confidence 88754
No 335
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.3e-35 Score=320.71 Aligned_cols=204 Identities=23% Similarity=0.298 Sum_probs=169.2
Q ss_pred eeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCC----CCCceeEEEECCccCCCCCc-cceEEEEcCCCC--CCC
Q 001291 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP----SLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDN--HIG 239 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 239 (1106)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|.++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999988 6 9999999988754322 257999999974 556
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc---ccccccc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD---ICADTMV 316 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~---~~~dt~v 316 (1106)
.+|+.|++.+.....+.. . .+....++.+++.+||+ +..++.+
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCchHHHHhCCh
Confidence 789999998764322110 0 01123467789999998 3456655
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
++ |||||||||+||++++.+|++|+|||||+|||..+...+.+.|+++.+ ..+++|++++|+.+++..++|+|+
T Consensus 124 ~~-----LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~ 197 (230)
T TIGR02770 124 FQ-----LSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVA 197 (230)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 54 999999999999999999999999999999999999999999998754 234566677888899999999999
Q ss_pred EecCCeEEEEcCHHHHH
Q 001291 397 LLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1106)
+|++|+++..|+++++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988874
No 336
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.6e-34 Score=318.19 Aligned_cols=173 Identities=24% Similarity=0.297 Sum_probs=135.3
Q ss_pred eeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCCHHHHHH
Q 001291 872 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTVYESLF 951 (1106)
Q Consensus 872 L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~tv~e~l~ 951 (1106)
|+==.++|..||+++++||||-||||+.++|+|..++ .+|. .. .-.++|=||...-....||++.+.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 3334577888999999999999999999999997664 3454 11 123678888655556789998764
Q ss_pred HhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHH
Q 001291 952 YSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1031 (1106)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~ 1031 (1106)
-...-+.. ..-+..|+++-++|.++.++.+ .+|||||.|||+||.+|.++.++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~-------~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFG-------SSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhcc-------cchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 32211111 1123467888899999888875 46999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 1032 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 1032 ~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
..+-++||+... .++|.+++-||+.+ +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999999874 47899999999864 445689988875
No 337
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-35 Score=323.75 Aligned_cols=217 Identities=25% Similarity=0.291 Sum_probs=174.5
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--Cc-eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 367888887763 2469999999999999999999999999999999999632 21 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ....+..+..+.++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87532 223567999999988776 899999987643321 1112233456788899988753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|||||||+|||+.++..++++|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 699999999987 5778899999998
Q ss_pred cCCEEEEEecCCC
Q 001291 1071 RGGREVYVGPLGH 1083 (1106)
Q Consensus 1071 ~gG~~~~~G~~~~ 1083 (1106)
+ |++++.|+..+
T Consensus 222 ~-G~i~~~g~~~~ 233 (252)
T PRK14239 222 D-GDLIEYNDTKQ 233 (252)
T ss_pred C-CEEEEeCCHHH
Confidence 5 78999987653
No 338
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=329.27 Aligned_cols=205 Identities=25% Similarity=0.351 Sum_probs=173.4
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCC-CCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1106)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4999999999999999999999999999999999999998 9999999988754221 356999999863 34568
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||.||+.++....+.. .++....++.+++.+||.+..++.++.
T Consensus 95 tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (277)
T PRK13652 95 TVEQDIAFGPINLGLD----------------------------------EETVAHRVSSALHMLGLEELRDRVPHH--- 137 (277)
T ss_pred cHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCccc---
Confidence 9999998865432210 001123467789999999888888765
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++... .+++|+.++|+.+++.++||+|++|++|
T Consensus 138 --LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 138 --LSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999987653 3456677888889999999999999999
Q ss_pred eEEEEcCHHHHH
Q 001291 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 339
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.7e-35 Score=365.52 Aligned_cols=207 Identities=25% Similarity=0.377 Sum_probs=165.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+++|+|+|++++||+.++|+||||||||||+++|+|++ |. +|+|.+||.++.+... ++.++||+|++.+|. .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 36999999999999999999999999999999999999 86 9999999999877654 578999999886664 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
|++|||.++... .+.+...++....+ .+..+ -.|++..||.||+. +
T Consensus 438 TI~eNI~~g~~~-------------------------~~~eei~~al~~a~------l~~~i--~~lp~G~dT~vge~-G 483 (588)
T PRK11174 438 TLRDNVLLGNPD-------------------------ASDEQLQQALENAW------VSEFL--PLLPQGLDTPIGDQ-A 483 (588)
T ss_pred CHHHHhhcCCCC-------------------------CCHHHHHHHHHHhC------HHHHH--HhcccccccccccC-C
Confidence 999999986310 11111111111000 11112 24666789999974 5
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
..||||||||++||||++++|+||+||||||+||+.++..|.+.|+++. .++|+|++ +|.. +....||+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiI-tHrl-~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMV-THQL-EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEE-ecCh-HHHHhCCEEEEEeCC
Confidence 5699999999999999999999999999999999999999999998763 35566554 4444 456789999999999
Q ss_pred eEEEEcCHHHHHH
Q 001291 402 QIVYQGPRELVLE 414 (1106)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1106)
+++..|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999864
No 340
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=327.70 Aligned_cols=209 Identities=25% Similarity=0.337 Sum_probs=171.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC---ccceEEEEcCCCC-CCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++||+|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999887112399999999876432 2357999999864 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.|..+..+.. .++....++.+++.+||+...++.+..
T Consensus 100 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~~~-- 143 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSEPAN-- 143 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCccc--
Confidence 99999999865432210 011123467789999999888877754
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.... +++|+.++|+..++ ..||++++|++
T Consensus 144 ---LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~-~~~d~i~~l~~ 218 (282)
T PRK13640 144 ---LSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKN-NLTVISITHDIDEA-NMADQVLVLDD 218 (282)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999876533 45556667777777 57999999999
Q ss_pred CeEEEEcCHHHHHH
Q 001291 401 GQIVYQGPRELVLE 414 (1106)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1106)
|++++.|+++++..
T Consensus 219 G~i~~~g~~~~~~~ 232 (282)
T PRK13640 219 GKLLAQGSPVEIFS 232 (282)
T ss_pred CEEEEeCCHHHHhc
Confidence 99999999988753
No 341
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2e-35 Score=321.47 Aligned_cols=202 Identities=26% Similarity=0.349 Sum_probs=169.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 36999999999999999999999999999999999999997 9999999988754322 3569999999989999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcC-CcccccccccCc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLG-LDICADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1106)
+||+||+.++....+.. .....+.+++.++ ++...++.+++
T Consensus 90 ~tv~~~l~~~~~~~~~~-------------------------------------~~~~~~~~l~~~~~l~~~~~~~~~~- 131 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR-------------------------------------SRKIPDEIYELFPVLKEMLGRRGGD- 131 (230)
T ss_pred CcHHHHHHHHHHhcCcc-------------------------------------hHHHHHHHHHHHHhHHHHhhCChhh-
Confidence 99999999875432100 0012344566665 56656666654
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.+. .+++++.++|+..++.+++|+|++|+
T Consensus 132 ----LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 132 ----LSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999987542 34566667888899999999999999
Q ss_pred CCeEEEEcCHHHH
Q 001291 400 DGQIVYQGPRELV 412 (1106)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1106)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998876
No 342
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5e-35 Score=323.59 Aligned_cols=205 Identities=25% Similarity=0.338 Sum_probs=171.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC----------------CccceE
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF----------------VPERTA 228 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~ 228 (1106)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 35999999999999999999999999999999999999987 99999999876421 113579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHH-hcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcC
Q 001291 229 AYISQHDNHIGEMTVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLG 307 (1106)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1106)
+||+|++.+++.+||+||+.++.. ..+.. ..+....+.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcC
Confidence 999999988999999999987542 11100 0011234567899999
Q ss_pred Ccccc-cccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChh
Q 001291 308 LDICA-DTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAP 386 (1106)
Q Consensus 308 L~~~~-dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~ 386 (1106)
|.+.. +..++ .||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|++++|+..
T Consensus 141 l~~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGKYPV-----HLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHH
Confidence 98753 55554 4999999999999999999999999999999999999999999998754 3 556667888889
Q ss_pred HHHhhcCeEEEecCCeEEEEcCHHHHH
Q 001291 387 ETYNLFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 387 ~~~~~~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
++..+||+|++|++|++++.|+++++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 999999999999999999999988764
No 343
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=322.94 Aligned_cols=206 Identities=21% Similarity=0.291 Sum_probs=166.8
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 59999999999999999999999999999999999998621 1289999999876421 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCC----cccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL----DICADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL----~~~~dt 314 (1106)
+ +||+||+.|+....+... ..+....++.+++.+|+ .+..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKD---------------------------------KKKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCC---------------------------------HHHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 899999998754321100 00011235566777777 344566
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.++ .|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++. .+ ++++.++|+..++.+++|+
T Consensus 147 ~~~-----~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 NAL-----SLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 554 499999999999999999999999999999999999999999999874 23 5666788888999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|+++.+|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 344
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-35 Score=321.01 Aligned_cols=200 Identities=24% Similarity=0.374 Sum_probs=168.1
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC---ccceEEEEcCCCCCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1106)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5999999999999999999999999999999999999998 999999998875432 2457999999987776 69
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-ccccccccCccC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMVGDEMR 321 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1106)
|+||+.++....+. ....++.+++.+||+ +..++.+.+
T Consensus 93 v~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~~--- 131 (241)
T PRK14250 93 VKDNIEYGPMLKGE--------------------------------------KNVDVEYYLSIVGLNKEYATRDVKN--- 131 (241)
T ss_pred HHHHHhcchhhcCc--------------------------------------HHHHHHHHHHHcCCCHHHhhCCccc---
Confidence 99999875322100 011345678889996 456666554
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+.+++.+++|+|++|++|
T Consensus 132 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 132 --LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKM-NLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhC-CCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999875433 455666888889999999999999999
Q ss_pred eEEEEcCHHHHH
Q 001291 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 345
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-35 Score=319.45 Aligned_cols=200 Identities=27% Similarity=0.388 Sum_probs=170.3
Q ss_pred EeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChh-cccceEEEEccCCCCCCCCCHHHH
Q 001291 871 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQE-TFARISGYCEQNDIHSPFVTVYES 949 (1106)
Q Consensus 871 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~g~v~q~~~~~~~~tv~e~ 949 (1106)
+|+|+||+|++||+++|+|+||||||||+++|+|..++ ..|+|.++|.+.... ..++.++|++|++.+++..|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p--~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKP--DSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 79999999999999999999999999999999997653 589999999876431 124579999999988888999999
Q ss_pred HHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHH
Q 001291 950 LFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1029 (1106)
Q Consensus 950 l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~ 1029 (1106)
+.+..... ........+.+.++++.+++.+..+..+ ..||+|||||++|||||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999987777664 469999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1030 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1030 ~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
+++.+.+.|+++..+ |+|||++||++. ++.+.||++++|++ |++++.|+..
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 215 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKPE 215 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999998764 999999999997 47788999999985 7899888754
No 346
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-35 Score=316.92 Aligned_cols=215 Identities=25% Similarity=0.333 Sum_probs=178.8
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC-C-CCCceeEEEECCccCCCCCc-------cceEEEEcCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-P-SLKVSGRVTYNGHNMDEFVP-------ERTAAYISQH 234 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1106)
..++++||||.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++..... .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 33467999999998755432 2579999999
Q ss_pred C--CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccc
Q 001291 235 D--NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICA 312 (1106)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1106)
+ .+.|.+||.+.+.-..+...... ..++....+.++|+.+||++..
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 5 67899999999887665431100 0112334567789999998642
Q ss_pred cccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhc
Q 001291 313 DTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLF 392 (1106)
Q Consensus 313 dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 392 (1106)
.. -+.+...|||||||||.||.||+.+|++|+.|||||+||..++.+|++.|+++.+ ..++.++.|+|+..-+.++|
T Consensus 145 ~~--~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 RR--LKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred HH--HhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 11 1233445999999999999999999999999999999999999999999999876 56788888999999999999
Q ss_pred CeEEEecCCeEEEEcCHHHHH
Q 001291 393 DDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~ 413 (1106)
|+|+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999884
No 347
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.7e-35 Score=321.89 Aligned_cols=212 Identities=24% Similarity=0.347 Sum_probs=174.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999999998 9999999988754322 2469999999999999
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++..... ..+...... ...+....++.+++.+||++..++.+++
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLAGL-- 143 (242)
T ss_pred CCHHHHHHHhhhccc--ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCChhh--
Confidence 999999998643210 000000000 0001223467789999999888877765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.++||+|++|++
T Consensus 144 ---LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 144 ---LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998753 3 4666678888999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 001291 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|+++++|+.+++.
T Consensus 218 g~~~~~~~~~~~~ 230 (242)
T TIGR03411 218 GSVLAEGSLDQVQ 230 (242)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988763
No 348
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.6e-35 Score=318.71 Aligned_cols=196 Identities=24% Similarity=0.338 Sum_probs=166.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 36999999999999999999999999999999999999987 999999998875432 135799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.+.....+... .+....++.+++.+||.+..++.+++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 137 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFPIQ 137 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCchh
Confidence 99999999998754322100 01112356678999998877777665
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
||||||||++||+|++.+|++|+|||||+|||+.++..+.+.|+++.. . ++++++++|+..++..++|+|++|
T Consensus 138 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 138 -----LSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998754 3 456777889999999999999999
Q ss_pred cCCeEE
Q 001291 399 SDGQIV 404 (1106)
Q Consensus 399 ~~G~iv 404 (1106)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 349
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=2.2e-35 Score=320.71 Aligned_cols=202 Identities=28% Similarity=0.347 Sum_probs=168.0
Q ss_pred eeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHH
Q 001291 168 LKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVRETL 247 (1106)
Q Consensus 168 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1106)
|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999987 9999999998765322 358999999889999999999
Q ss_pred HHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChh
Q 001291 248 AFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGG 327 (1106)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGG 327 (1106)
.++......+ .. ..+....++.+++.+||++..++.+++ ||||
T Consensus 76 ~~~~~~~~~~--------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--------LS------------------------KSERRAIVEEHIALVGLTEAADKRPGQ-----LSGG 118 (230)
T ss_pred HHHHHhcccC--------CC------------------------HHHHHHHHHHHHHHcCCHHHHcCChhh-----CCHH
Confidence 8863210000 00 001123456789999999888887765 9999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEc
Q 001291 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQG 407 (1106)
Q Consensus 328 qkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 407 (1106)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +.+|+.++|+..++.+++|+|++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999876533 456666788889999999999999999999988
Q ss_pred CHHHH
Q 001291 408 PRELV 412 (1106)
Q Consensus 408 ~~~~~ 412 (1106)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65443
No 350
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=337.69 Aligned_cols=192 Identities=23% Similarity=0.376 Sum_probs=166.8
Q ss_pred eeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh-------hcccceEEEEccCCCCCCCCCH
Q 001291 874 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 946 (1106)
Q Consensus 874 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~g~v~q~~~~~~~~tv 946 (1106)
|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998663 58999999976532 1235679999999999999999
Q ss_pred HHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001291 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1106)
Q Consensus 947 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgL 1026 (1106)
+||+.|+.. ...++.++++++.+++.+..+..+ .+||||||||++|||||+.+|++|||||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987631 112345789999999988777664 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1027 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1027 D~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
|+.++..+++.|+++.++ |+|||++|||++ ++...||++++|++ |+++..|+..+
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 215 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLEE 215 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHHH
Confidence 999999999999998765 899999999997 57889999999985 78999987653
No 351
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.3e-35 Score=366.89 Aligned_cols=210 Identities=24% Similarity=0.390 Sum_probs=174.9
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.|+||+|+|+. ++++|+|+|++|++|+.+||+|+||||||||+++|+|...+ .+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEEH
Confidence 6899999999851 23599999999999999999999999999999999998764 589999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccCCCC
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLPG 992 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~~~g 992 (1106)
++ ..+++.+|||+|++.+++ .|++||+.++.. .+.+ ++.+.++++..++.+.. |..++..|
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G 609 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEEG 609 (708)
T ss_pred HHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCCC
Confidence 43 456778999999998875 599999987521 1122 23467777777776543 33344433
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
.+||||||||++|||||+++|+||+||||||+||+++++.+++.|+++ +|+|+|++||+++ ..+.||++++|++
T Consensus 610 -~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~- 683 (708)
T TIGR01193 610 -SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH- 683 (708)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-
Confidence 569999999999999999999999999999999999999999999875 4899999999986 4578999999985
Q ss_pred CEEEEEecC
Q 001291 1073 GREVYVGPL 1081 (1106)
Q Consensus 1073 G~~~~~G~~ 1081 (1106)
|++++.|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 799999874
No 352
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-35 Score=321.93 Aligned_cols=216 Identities=21% Similarity=0.280 Sum_probs=174.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++++|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367888887763 236999999999999999999999999999999999964321 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.++|++|++.+++ .|+.||+.++...+. ....+..++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 224567999999988777 899999988653321 1122334556788888888753 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.||++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 34699999999999999999999999999999999999999999999985 4899999999987 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++++.|+..
T Consensus 220 ~-G~i~~~~~~~ 230 (250)
T PRK14240 220 N-GEIVEFGDTV 230 (250)
T ss_pred C-CEEEEeCCHH
Confidence 5 7899888643
No 353
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=326.35 Aligned_cols=204 Identities=28% Similarity=0.396 Sum_probs=171.8
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC--C---ccceEEEEcCCCC-CCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF--V---PERTAAYISQHDN-HIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~~ 239 (1106)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... . .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5999999999999999999999999999999999999998 99999999887421 1 1357999999863 344
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||.||+.|+....+. .. .+....+..+++.+||++..++.+++
T Consensus 93 ~~tv~e~i~~~~~~~~~----------~~------------------------~~~~~~~~~~l~~~~L~~~~~~~~~~- 137 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL----------SK------------------------EEVEKRVKEALKAVGMEGFENKPPHH- 137 (275)
T ss_pred cccHHHHHHHHHHHcCC----------CH------------------------HHHHHHHHHHHHHCCCchhhcCChhh-
Confidence 67999999886432111 00 01122456789999999888888765
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||++++|+
T Consensus 138 ----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 138 ----LSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999998754 3 5667778889999999999999999
Q ss_pred CCeEEEEcCHHHHH
Q 001291 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999999875
No 354
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-35 Score=321.02 Aligned_cols=209 Identities=24% Similarity=0.317 Sum_probs=170.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCCC---ccceEEEEcCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEFV---PERTAAYISQHDNHIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 239 (1106)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35999999999999999999999999999999999998741 013899999998875432 2357999999988889
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----ccccc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADTM 315 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt~ 315 (1106)
.+||+||+.++.+..+.... ..+....++.+++.+||.+ ..|+.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhhhcCC
Confidence 99999999987543211000 0011234567888999854 34555
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+. .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++. .+ ++++.++|+..++.+++|+|
T Consensus 144 ~~-----~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i 215 (250)
T PRK14247 144 AG-----KLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYV 215 (250)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEE
Confidence 54 499999999999999999999999999999999999999999999874 23 56677888888999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999998774
No 355
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-35 Score=321.39 Aligned_cols=203 Identities=23% Similarity=0.307 Sum_probs=165.1
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC-----CCCCceeEEEECCccCCCC-----CccceEEEEcCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHD 235 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.+. |+ +|+|.++|+++... ..++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 59999999999999999999999999999999999864 34 89999999887531 1145799999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----c
Q 001291 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----C 311 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~ 311 (1106)
.+++ .||+||+.|+....+.... .+....++.+++.+||.. .
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 5999999987543221000 001123556788888854 2
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001291 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1106)
Q Consensus 312 ~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1106)
.+..+ +.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.++
T Consensus 143 ~~~~~-----~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~ 214 (253)
T PRK14242 143 LHESA-----LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARV 214 (253)
T ss_pred hhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHh
Confidence 34444 4499999999999999999999999999999999999999999999873 23 5666688888999999
Q ss_pred cCeEEEecCCeEEEEcCHHHHH
Q 001291 392 FDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 392 ~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|+|++|++|++++.|+++++.
T Consensus 215 ~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 215 SDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988763
No 356
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-35 Score=322.23 Aligned_cols=219 Identities=20% Similarity=0.258 Sum_probs=172.2
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--Cc-eeEEEEEEcCcc
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISGYP 921 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g~~ 921 (1106)
.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.+
T Consensus 7 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 73 (251)
T PRK14244 7 SVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID 73 (251)
T ss_pred EeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe
Confidence 4667776553 2469999999999999999999999999999999999754 11 358999999987
Q ss_pred CCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCC
Q 001291 922 KKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGL 996 (1106)
Q Consensus 922 ~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~L 996 (1106)
... ...++.++|++|++.+++. |+.||+.+....+. ........+..++++++.+++.+........ .+.+|
T Consensus 74 i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~L 150 (251)
T PRK14244 74 VYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFEL 150 (251)
T ss_pred hHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhC
Confidence 532 1245679999999887775 99999987643321 1112233445678899999986521111111 13469
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001291 997 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREV 1076 (1106)
Q Consensus 997 S~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~ 1076 (1106)
|+|||||++|||||+.+|+||||||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.||++++|++ |+++
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~ 227 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIV 227 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999985 4899999999997 57788999999985 7899
Q ss_pred EEecCC
Q 001291 1077 YVGPLG 1082 (1106)
Q Consensus 1077 ~~G~~~ 1082 (1106)
+.|+..
T Consensus 228 ~~~~~~ 233 (251)
T PRK14244 228 EYNTTQ 233 (251)
T ss_pred EeCCHH
Confidence 888753
No 357
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.2e-35 Score=325.44 Aligned_cols=208 Identities=24% Similarity=0.310 Sum_probs=172.6
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCC--
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHD-- 235 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d-- 235 (1106)
.+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999998 999999998875432 135699999986
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-ccccc
Q 001291 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADT 314 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1106)
.+++.+||+||+.+....... .. ..+....++.+++.+||+ ...+.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTS---------LD------------------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CC------------------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 466789999999876432100 00 001123456789999996 56777
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.++. |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+...+.+++|+
T Consensus 147 ~~~~-----LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 LPRQ-----LSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQA-FGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred Chhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHHHHhcE
Confidence 6654 9999999999999999999999999999999999999999999987653 345677788999999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
+++|++|++++.|+++++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998874
No 358
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-35 Score=316.82 Aligned_cols=206 Identities=26% Similarity=0.348 Sum_probs=174.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC-ccceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-PERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|.++.... .++.++|++|++..++.+|+
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999997 999999999876432 24679999999988889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.+.....+... ......++.+++.+||++..++.+.+
T Consensus 90 ~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (232)
T cd03300 90 FENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKPSQ----- 130 (232)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCChhh-----
Confidence 999998754322100 00112456789999999888877754
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.... +.+|++++|...++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~-~~tiii~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKEL-GITFVFVTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999876432 45555677888889999999999999999
Q ss_pred EEEcCHHHHH
Q 001291 404 VYQGPRELVL 413 (1106)
Q Consensus 404 v~~G~~~~~~ 413 (1106)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999887664
No 359
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-35 Score=333.05 Aligned_cols=214 Identities=17% Similarity=0.187 Sum_probs=171.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCC-CceeEEEECCccCCCCCc-------cceEEEEcCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL-KVSGRVTYNGHNMDEFVP-------ERTAAYISQHDN 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1106)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|.++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 569999999999999999999999999999999999986411 128999999998765432 246999999874
Q ss_pred --CCCCCCHHHHHHHHHHhcCC-CcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc---
Q 001291 237 --HIGEMTVRETLAFAARCQGV-GTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI--- 310 (1106)
Q Consensus 237 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--- 310 (1106)
+.+.+||.+++.+....... +..+ + ...+....+..+++.+||.+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~-------------~~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------Q-------------RFGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------c-------------cHHHHHHHHHHHHHHCCCCChHH
Confidence 57889999999864321100 0000 0 00011234677899999975
Q ss_pred cccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHh
Q 001291 311 CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYN 390 (1106)
Q Consensus 311 ~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 390 (1106)
..++.+. .|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+.++++++|+...+.+
T Consensus 151 ~~~~~p~-----~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~~ 224 (330)
T PRK15093 151 AMRSFPY-----ELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLSQ 224 (330)
T ss_pred HHhCCch-----hCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHH
Confidence 3455554 4999999999999999999999999999999999999999999999764 335677778999999999
Q ss_pred hcCeEEEecCCeEEEEcCHHHHH
Q 001291 391 LFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 391 ~~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
++|+|++|++|+|++.|+.+++.
T Consensus 225 ~~dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 225 WADKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred hCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999998874
No 360
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-35 Score=321.54 Aligned_cols=217 Identities=24% Similarity=0.266 Sum_probs=173.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCce---eEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~---~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 467788887653 3469999999999999999999999999999999999765322 379999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.++|++|++.+++..|+.||+.+...... ....+...+.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 2345579999999988888999999987643221 1112233445667777776642 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+..||+|||||++|||||+.+|+||+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999864 799999999997 4777899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++++.|+..
T Consensus 222 ~-G~i~~~~~~~ 232 (252)
T PRK14272 222 V-GDLVEHGPTD 232 (252)
T ss_pred C-CEEEEeCCHH
Confidence 5 7899988754
No 361
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.9e-35 Score=309.36 Aligned_cols=190 Identities=49% Similarity=0.851 Sum_probs=160.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCC--CCceeEEEEEEcCc
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGDIRISGY 920 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~--~~~~~~G~i~i~g~ 920 (1106)
.+.++++++.++... ....+.+|+|+||+|++|++++|+||||||||||+++|+|.. + +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 477888888775210 001246999999999999999999999999999999999986 5 45899999998
Q ss_pred cCChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 001291 921 PKKQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 921 ~~~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gq 1000 (1106)
+......++.++|++|++.+++.+|+.||+.+....+ .||+||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445667999999988888899999997642100 399999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|||++|||||+.+|++|+|||||+|||+.+++.+.+.|+++.++|+|||++||+++.++.+.||++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998777999999999986456778999999985 6887654
No 362
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=3e-35 Score=338.72 Aligned_cols=195 Identities=25% Similarity=0.388 Sum_probs=167.8
Q ss_pred eeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh-------hcccceEEEEccCCCCCCCCCH
Q 001291 874 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 946 (1106)
Q Consensus 874 ~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~g~v~q~~~~~~~~tv 946 (1106)
|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 99999999999999999999999999999998663 58999999987532 1235679999999999999999
Q ss_pred HHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001291 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1106)
Q Consensus 947 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgL 1026 (1106)
+||+.|+.... .....++.++++++.++|.+..++.+ .+||||||||++|||||+.+|++|||||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12233456889999999988777664 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1027 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1027 D~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
|+.++..+++.|+++.++ |+|||++||+++ ++...||++++|++ |+++..|+..
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 217 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPIA 217 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCHH
Confidence 999999999999998765 899999999997 57788999999985 7899988754
No 363
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=325.45 Aligned_cols=215 Identities=22% Similarity=0.315 Sum_probs=174.5
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC---ccceEEEEcCCCC-CCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1106)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999999998 999999998875432 2457999999874 67888
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
|+++|+.|.....+.. ..+....++.+++.+||.+..++.+++
T Consensus 100 ~v~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 142 (269)
T PRK13648 100 IVKYDVAFGLENHAVP----------------------------------YDEMHRRVSEALKQVDMLERADYEPNA--- 142 (269)
T ss_pred cHHHHHHhhHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCchhhhCCccc---
Confidence 9999999875432110 001122456789999998888877654
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++.. +|+|++|++|
T Consensus 143 --LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 143 --LSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS-EHNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 999999999999999999999999999999999999999999998754 324455556777777765 9999999999
Q ss_pred eEEEEcCHHHHHH---HHHhcCCCCC
Q 001291 402 QIVYQGPRELVLE---FFESMGFKCP 424 (1106)
Q Consensus 402 ~iv~~G~~~~~~~---~f~~~G~~~p 424 (1106)
++++.|+++++.+ .+...|+.+|
T Consensus 219 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 244 (269)
T PRK13648 219 TVYKEGTPTEIFDHAEELTRIGLDLP 244 (269)
T ss_pred EEEEecCHHHHhcCHHHHHhcCCCCC
Confidence 9999999988743 3333444443
No 364
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-36 Score=299.84 Aligned_cols=218 Identities=24% Similarity=0.365 Sum_probs=187.1
Q ss_pred CCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh---hcccceEEEEccCCCCCC
Q 001291 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDIHSP 942 (1106)
Q Consensus 866 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~g~v~q~~~~~~ 942 (1106)
++++.+++++|+.|++|.+++++|||||||||||.+++++.+ ..+|+|+++|.++.. ...++.++..-|+.....
T Consensus 11 y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~ 88 (252)
T COG4604 11 YGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHINS 88 (252)
T ss_pred hCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhhh
Confidence 356789999999999999999999999999999999998765 358999999998753 345677788888887777
Q ss_pred CCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCC
Q 001291 943 FVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1022 (1106)
Q Consensus 943 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEP 1022 (1106)
.+||+|-+.|+...+. .....++.+..++++++.++|.++.++.. .+||||||||..||+.|+++.+.++||||
T Consensus 89 rlTV~dLv~FGRfPYS-qGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEP 162 (252)
T COG4604 89 RLTVRDLVGFGRFPYS-QGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEP 162 (252)
T ss_pred eeEHHHHhhcCCCccc-CCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCc
Confidence 8999999999865442 23345566778999999999999999875 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC--chhHHHHHHH
Q 001291 1023 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH--HSCHLISYFE 1093 (1106)
Q Consensus 1023 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~--~~~~~~~yf~ 1093 (1106)
.++||.+....+|+.|++++++ |+|||+|.||.++ ..-++|.|+-|++ |+++..|++.+ ..+.|-+.|+
T Consensus 163 LNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~eii~~~~L~eiyd 234 (252)
T COG4604 163 LNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDEIIQPEILSEIYD 234 (252)
T ss_pred ccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHHhcCHHHHHHHhc
Confidence 9999999999999999999876 9999999999986 5567899999985 79999999876 3445556554
No 365
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=325.09 Aligned_cols=229 Identities=20% Similarity=0.235 Sum_probs=179.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--C-ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478899987763 2469999999999999999999999999999999999642 1 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.++|++|++.+++ .|++||+.+..... ........++.+.++++.+++.. ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFP-KSIYNNITHALKYA--GERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCc-ccHHHHHHHHHHhc--CCCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87532 123567999999988777 49999998764222 11112233455778888888752 22332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 689999999987 4778899999998
Q ss_pred cCCEEEEEecCCCc-----hhHHHHHHHhC
Q 001291 1071 RGGREVYVGPLGHH-----SCHLISYFEVC 1095 (1106)
Q Consensus 1071 ~gG~~~~~G~~~~~-----~~~~~~yf~~~ 1095 (1106)
+ |++++.|+..+. .....+||.+.
T Consensus 238 ~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (268)
T PRK14248 238 N-GDLVEYDQTEQIFTSPKQQKTEDYINGR 266 (268)
T ss_pred C-CEEEEeCCHHHHHhCCCChHHHHHHhcc
Confidence 5 789999875421 12345666543
No 366
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=324.83 Aligned_cols=209 Identities=25% Similarity=0.387 Sum_probs=172.9
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 6999999999999999999999999999999999999987 9999999987643321 357999999988889999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|.||+.++.... .+. . +. + .......++.+++.+||++..++.+++
T Consensus 102 v~e~l~~~~~~~-~~~-------~-------~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 147 (265)
T PRK10575 102 VRELVAIGRYPW-HGA-------L-------GR-F--------------GAADREKVEEAISLVGLKPLAHRLVDS---- 147 (265)
T ss_pred HHHHHHhCcccc-ccc-------c-------cC-C--------------CHHHHHHHHHHHHHcCCHHHhcCCccc----
Confidence 999998753210 000 0 00 0 000123456789999998888888765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+.+|++|||||||+|||..++..+.+.|++++... +++|+.++|+.+++.+++|+|++|++|+
T Consensus 148 -LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 148 -LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 99999999999999999999999999999999999999999999876432 4556677888899999999999999999
Q ss_pred EEEEcCHHHHH
Q 001291 403 IVYQGPRELVL 413 (1106)
Q Consensus 403 iv~~G~~~~~~ 413 (1106)
+++.|+.+++.
T Consensus 226 i~~~~~~~~~~ 236 (265)
T PRK10575 226 MIAQGTPAELM 236 (265)
T ss_pred EEEecCHHHhc
Confidence 99999987763
No 367
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3e-35 Score=315.80 Aligned_cols=194 Identities=30% Similarity=0.443 Sum_probs=162.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC---ccceEEEEcCCCC-CCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999997 999999998875432 1357999999864 4678
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++....+.. . .+....++.+++.+||+...++.+++
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 134 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------E------------------------EEIEERVEEALELVGLEGLRDRSPFT-- 134 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCcHhhhcCCccc--
Confidence 99999998865322110 0 00112456788999998877877765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++..+||+|++|++
T Consensus 135 ---LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 135 ---LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998764 3 45677788889999999999999999
Q ss_pred Ce
Q 001291 401 GQ 402 (1106)
Q Consensus 401 G~ 402 (1106)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 368
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-35 Score=321.20 Aligned_cols=208 Identities=21% Similarity=0.308 Sum_probs=168.7
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCC--C---CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDE--F---VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5999999999999999999999999999999999998762 0138999999998752 1 1235799999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----cccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1106)
+.+||.||+.++....+.... ..+....++.+++.+||.. ..++
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKS--------------------------------KKELDERVEWALKKAALWDEVKDRLND 145 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCC--------------------------------HHHHHHHHHHHHHHcCCccchhhhhcc
Confidence 999999999987543211000 0001123566788888742 3444
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.++ .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|++++|+..++..+||+
T Consensus 146 ~~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~ 217 (253)
T PRK14267 146 YPS-----NLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDY 217 (253)
T ss_pred Chh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCE
Confidence 444 4999999999999999999999999999999999999999999998743 3 5667778888999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|++++.|+++++.
T Consensus 218 i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 218 VAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 369
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=322.62 Aligned_cols=238 Identities=22% Similarity=0.259 Sum_probs=186.7
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 919 (1106)
.+.++|++++++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478899988764 34699999999999999999999999999999999997653 14589999999
Q ss_pred ccCCh----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 001291 920 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNG 995 (1106)
Q Consensus 920 ~~~~~----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~ 995 (1106)
.+... ...++.++|++|++.+++ .|++||+.+...... ....+..+..+.++++.+++......... ..+.+
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234567999999988777 899999987643221 12233344456788899988643211111 12356
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 996 LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
||+|||||++|||||+.+|+||+|||||+|||+.+++.+.+.|+++.+ ++|||++||+++ ++.+.||++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999987 57788999999985 799
Q ss_pred EEEecCCCc-----hhHHHHHHHhCCCCcc
Q 001291 1076 VYVGPLGHH-----SCHLISYFEVCPDAHF 1100 (1106)
Q Consensus 1076 ~~~G~~~~~-----~~~~~~yf~~~~g~~~ 1100 (1106)
++.|+..+. .....+|+++.+|=-+
T Consensus 241 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (276)
T PRK14271 241 VEEGPTEQLFSSPKHAETARYVAGLSGDVK 270 (276)
T ss_pred EEeCCHHHHHhCcCcHHHHHHHhhcCCccc
Confidence 999876531 1235678888776443
No 370
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.4e-35 Score=354.30 Aligned_cols=227 Identities=24% Similarity=0.320 Sum_probs=185.4
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++++++ ++.+|+|+||+|.+|+++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67888887663 34699999999999999999999999999999999998653 4899999998753
Q ss_pred hh----cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 924 QE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 924 ~~----~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.. ..++.+||++|++.+++.+||+||+.|+...+.. ........++.+.++++.+++.+..++.+ .+|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1235699999999888899999999886432210 11122334456889999999988777664 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|.|||++|||++ ++.+.||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999997 57788999999985 789999
Q ss_pred ecCCCc-hhHHHHHH
Q 001291 1079 GPLGHH-SCHLISYF 1092 (1106)
Q Consensus 1079 G~~~~~-~~~~~~yf 1092 (1106)
|+..+. ...+++++
T Consensus 223 ~~~~~~~~~~~~~~~ 237 (501)
T PRK10762 223 REVADLTEDSLIEMM 237 (501)
T ss_pred cCcCcCCHHHHHHHh
Confidence 887653 23344443
No 371
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.1e-35 Score=367.26 Aligned_cols=211 Identities=24% Similarity=0.394 Sum_probs=175.1
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..+.|+||+|+++ +++++|+|+||+|+||+++||+|+||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3689999986542 1246999999999999999999999999999999999987 4 48999999988
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~~~ 991 (1106)
+++ ..+++.++||+|++.++. .|++||+.++. ++.+ ++.++++++..++.+.. |..+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~----~eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDAS----DEQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCC----HHHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 754 456788999999998875 69999998862 1222 34567777777776533 3345544
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
| .+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|++||+++ ..+.||+|++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 4699999999999999999999999999999999999999999999875 5899999999986 4678999999985
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 559 -G~i~e~G~~~ 568 (588)
T PRK11174 559 -GQIVQQGDYA 568 (588)
T ss_pred -CeEeecCCHH
Confidence 7999998754
No 372
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=6.3e-35 Score=315.67 Aligned_cols=194 Identities=25% Similarity=0.345 Sum_probs=159.4
Q ss_pred CCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCC
Q 001291 865 PEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFV 944 (1106)
Q Consensus 865 ~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~ 944 (1106)
.++++++|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+
T Consensus 31 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~ 99 (224)
T cd03220 31 EVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPEL 99 (224)
T ss_pred hcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCC
Confidence 3456789999999999999999999999999999999999765 358999999975421 11112344678
Q ss_pred CHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCC
Q 001291 945 TVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1024 (1106)
Q Consensus 945 tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTs 1024 (1106)
||.||+.+....+. ......++.+.++++.+++.+..+..+ .+||+|||||++|||||+.+|++|||||||+
T Consensus 100 tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~ 171 (224)
T cd03220 100 TGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLA 171 (224)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 99999987654321 222334456788999999987777654 4699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1025 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1025 gLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 172 gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 172 VGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999998777899999999987 46778999999975 7887754
No 373
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-35 Score=314.94 Aligned_cols=195 Identities=25% Similarity=0.380 Sum_probs=163.4
Q ss_pred ceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh-------hcccceEEEEccCCCC
Q 001291 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-------ETFARISGYCEQNDIH 940 (1106)
Q Consensus 868 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~g~v~q~~~~ 940 (1106)
++.+ |+||+|++ |+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+
T Consensus 12 ~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 86 (214)
T cd03297 12 DFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYAL 86 (214)
T ss_pred Ceee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCcc
Confidence 3445 99999999 99999999999999999999998653 58999999976531 1234579999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEe
Q 001291 941 SPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1020 (1106)
Q Consensus 941 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLD 1020 (1106)
++.+|+.||+.+..... .....++.+.++++.+++.+..+..+ .+||+|||||++|||||+.+|++|+||
T Consensus 87 ~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllD 156 (214)
T cd03297 87 FPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLLD 156 (214)
T ss_pred CCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 88899999998764221 12234456788999999987666553 469999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1021 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1021 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|||+|||+.+++.+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 157 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 157 EPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999999999765 899999999987 47788999999985 6887754
No 374
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=323.66 Aligned_cols=205 Identities=22% Similarity=0.292 Sum_probs=171.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC---ccceEEEEcCCCC-CCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDN-HIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1106)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 45999999999999999999999999999999999999998 999999998875422 2457999999864 6778
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
.||.||+.++....+.. . .+....++.+++.+||....++.+..
T Consensus 97 ~tv~eni~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------R------------------------EEMIKRVDEALLAVNMLDFKTREPAR-- 140 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------H------------------------HHHHHHHHHHHHHCCCHhHhhCCccc--
Confidence 89999998865422110 0 01112467788999998888877654
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|++++. ..+++|+.++|+..++. .+|+|++|++
T Consensus 141 ---LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tiil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 141 ---LSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKE-KYQLTVLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHH-hCCEEEEEEC
Confidence 999999999999999999999999999999999999999999998765 32455666788888876 6999999999
Q ss_pred CeEEEEcCHHHHH
Q 001291 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998875
No 375
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.1e-33 Score=353.89 Aligned_cols=123 Identities=24% Similarity=0.290 Sum_probs=100.8
Q ss_pred CCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCC---CeEEE
Q 001291 944 VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLPGVNGLSTEQRKRLTIAVELVANP---SIIFM 1019 (1106)
Q Consensus 944 ~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~-~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p---~illL 1019 (1106)
+|+.|++.|...+. . .....+.++.++|..+ .+... .+||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~------~---i~~~l~~L~~vgL~~l~l~~~~-----~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP------K---IARKLQTLVDVGLGYIKLGQPA-----TTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch------h---hhHHHHHHHHCCCCcccccCCc-----ccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 67888877654321 0 1123578889999753 34442 469999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe-----cCCEEEEEecCC
Q 001291 1020 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGREVYVGPLG 1082 (1106)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~-----~gG~~~~~G~~~ 1082 (1106)
||||+|||+.....+++.|+++.++|.|||+|+|+++ ..+.+|+++.|. +||++++.|+..
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~ 923 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTPE 923 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCHH
Confidence 9999999999999999999999888999999999986 346899999995 579999999754
No 376
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-35 Score=320.10 Aligned_cols=215 Identities=22% Similarity=0.309 Sum_probs=174.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcCc
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISGY 920 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g~ 920 (1106)
++++|+++.++ +..+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887653 246999999999999999999999999999999999975421 25899999998
Q ss_pred cCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc----cccccCCC
Q 001291 921 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL----RQSLVGLP 991 (1106)
Q Consensus 921 ~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~----~~~~~~~~ 991 (1106)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+. .+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 143 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP---- 143 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC----
Confidence 7532 123567999999988777 899999987643221 11222344557888999888542 2332
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
+.+||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++
T Consensus 144 -~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~ 220 (250)
T PRK14262 144 -GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR 220 (250)
T ss_pred -hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 346999999999999999999999999999999999999999999999865 799999999987 47788999999985
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|+++..|+..
T Consensus 221 -G~i~~~g~~~ 230 (250)
T PRK14262 221 -GELIEYGPTR 230 (250)
T ss_pred -CEEEEecCHH
Confidence 7899888753
No 377
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-35 Score=321.82 Aligned_cols=222 Identities=22% Similarity=0.257 Sum_probs=176.9
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
.+.++|+++.++ +..+|+|+||++++|+++||+|+||||||||+++|+|..++. ...|.|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478899988764 235999999999999999999999999999999999976532 1368999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.+... ...++.++|++|++.+++ .|+.||+.+...... .....+..+.+.++++.+++.+..+..... .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVG--WRPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 77521 234567999999988777 899999987643221 012223345678899999885422111111 134
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecC-
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1072 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~g- 1072 (1106)
.||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++|||++ ++.+.||++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 6999999999999999999999999999999999999999999999865 4899999999997 578899999999863
Q ss_pred ---CEEEEEecCC
Q 001291 1073 ---GREVYVGPLG 1082 (1106)
Q Consensus 1073 ---G~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 229 ~~~G~i~~~~~~~ 241 (261)
T PRK14258 229 NRIGQLVEFGLTK 241 (261)
T ss_pred CcCceEEEeCCHH
Confidence 8999998764
No 378
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=8.6e-35 Score=321.87 Aligned_cols=216 Identities=25% Similarity=0.265 Sum_probs=174.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc-
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP- 921 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~- 921 (1106)
.+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|..++ ..|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 378888887763 23699999999999999999999999999999999998653 47999999986
Q ss_pred ----CChh---c----ccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-ccccc
Q 001291 922 ----KKQE---T----FARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSL 987 (1106)
Q Consensus 922 ----~~~~---~----~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~ 987 (1106)
+... . .++.++|++|++. +.+.+|+.||+.+...... .......+..+.++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 1346999999974 4566899999876432211 1112234556788999999963 44444
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeE
Q 001291 988 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1066 (1106)
Q Consensus 988 ~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v 1066 (1106)
+.+||+|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3469999999999999999999999999999999999999999999998764 899999999987 466789999
Q ss_pred EEEecCCEEEEEecCC
Q 001291 1067 FLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1067 ~~l~~gG~~~~~G~~~ 1082 (1106)
++|++ |++++.|+..
T Consensus 223 ~~l~~-g~i~~~~~~~ 237 (258)
T PRK11701 223 LVMKQ-GRVVESGLTD 237 (258)
T ss_pred EEEEC-CEEEEeCCHH
Confidence 99985 7999998754
No 379
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.1e-35 Score=316.06 Aligned_cols=197 Identities=25% Similarity=0.336 Sum_probs=169.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999998 999999998765322 35799999998888899999
Q ss_pred HHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCC
Q 001291 245 ETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGV 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgL 324 (1106)
||+.+.....+. ....+..+++.+||++..|..+++ |
T Consensus 89 ~~~~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------------------------PDSRIDEVLNIVDLTNTGKKKAKQ-----F 125 (223)
T ss_pred HHHHHHHHHcCC--------------------------------------CHHHHHHHHHHcCCcHHHhhhHhh-----C
Confidence 999886543210 001245678899999888877765 9
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEE
Q 001291 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv 404 (1106)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998753 3 445666778888899999999999999999
Q ss_pred EEcCHH
Q 001291 405 YQGPRE 410 (1106)
Q Consensus 405 ~~G~~~ 410 (1106)
+.|++.
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999865
No 380
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=7e-35 Score=314.84 Aligned_cols=211 Identities=23% Similarity=0.343 Sum_probs=173.4
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
++++|+++.++.. .+...+|+|+||++++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5677887765310 012579999999999999999999999999999999999765 35899999998753
Q ss_pred hh------cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCC
Q 001291 924 QE------TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS 997 (1106)
.. ..++.++|++|++.+++..|+.||+.+...... ....++....+.++++.+++.+..+..+ .+||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCC
Confidence 21 235679999999988888999999988654321 1223444567889999999987766653 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||++||+++ +.+.||++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 4578999999985 553
No 381
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=319.70 Aligned_cols=220 Identities=22% Similarity=0.235 Sum_probs=173.7
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367788877653 246999999999999999999999999999999999975531 3579999999
Q ss_pred ccCC----hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 001291 920 YPKK----QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNG 995 (1106)
Q Consensus 920 ~~~~----~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~ 995 (1106)
.+.. ....++.++|++|++.+++ .|+.||+.+...... ....+..++.+.++++.+++.+........ .+.+
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 7653 1234567999999988777 899999987643221 111223345677888888875321111111 1346
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 996 LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
||+|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 699999999997 57888999999985 789
Q ss_pred EEEecCC
Q 001291 1076 VYVGPLG 1082 (1106)
Q Consensus 1076 ~~~G~~~ 1082 (1106)
++.|+..
T Consensus 223 ~~~g~~~ 229 (249)
T PRK14253 223 VEHDDTQ 229 (249)
T ss_pred EEeCCHH
Confidence 9988754
No 382
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-35 Score=322.92 Aligned_cols=210 Identities=22% Similarity=0.377 Sum_probs=173.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 35999999999999999999999999999999999999987 9999999988754322 35699999999888899
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++..-.. + .. .. ........++.+++.+||++..++.+.+
T Consensus 97 tv~~~~~~~~~~~~-~----~~-------------~~------------~~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (265)
T PRK10253 97 TVQELVARGRYPHQ-P----LF-------------TR------------WRKEDEEAVTKAMQATGITHLADQSVDT--- 143 (265)
T ss_pred cHHHHHHhCccccc-c----cc-------------cC------------CCHHHHHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987531000 0 00 00 0000122456789999998877877765
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|+|++|++|
T Consensus 144 --LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~-~~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 144 --LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNRE-KGYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred --CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999987643 3456677788889999999999999999
Q ss_pred eEEEEcCHHHHH
Q 001291 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 383
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=9.9e-35 Score=320.52 Aligned_cols=215 Identities=22% Similarity=0.276 Sum_probs=173.7
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc--eeEEEEEEcC
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGDIRISG 919 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~--~~~G~i~i~g 919 (1106)
..+.++|+++.++ +++|+|+||+|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3578889887652 25899999999999999999999999999999999976531 1579999999
Q ss_pred ccCChhcc-cceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc---ccccccCCCCC
Q 001291 920 YPKKQETF-ARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP---LRQSLVGLPGV 993 (1106)
Q Consensus 920 ~~~~~~~~-~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~---~~~~~~~~~g~ 993 (1106)
.++..... ++.++|++|++. +.+..|+.+++.+...... .. ..++.++++++.+++.+ ..+.. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KP--ADDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CC--hHHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87643222 356999999974 3456799898866432211 11 12356789999999976 23443 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
.+||+|||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 469999999999999999999999999999999999999999999998764 899999999987 47788999999975
Q ss_pred CEEEEEecCC
Q 001291 1073 GREVYVGPLG 1082 (1106)
Q Consensus 1073 G~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 217 G~i~~~~~~~ 226 (254)
T PRK10418 217 GRIVEQGDVE 226 (254)
T ss_pred CEEEEecCHH
Confidence 7899988754
No 384
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.9e-35 Score=322.90 Aligned_cols=216 Identities=22% Similarity=0.307 Sum_probs=174.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC--------ccceEEEEcCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV--------PERTAAYISQHDN 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~ 236 (1106)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 35999999999999999999999999999999999999875223699999998764321 1356999999988
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
+++.+||+||+.++..... . ..... ... ...+....++.+++.+||++..|+.+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-------~~~~~--~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-------FWRTC--FSW---------------FTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-------chhhh--ccc---------------ccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 8999999999988642100 0 00000 000 00011235677899999998888877
Q ss_pred cCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
++ |||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+. .+++|+.++|+..++.+++|+|+
T Consensus 151 ~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 ST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred cc-----cCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 65 9999999999999999999999999999999999999999999987653 34667778888899999999999
Q ss_pred EecCCeEEEEcCHHHH
Q 001291 397 LLSDGQIVYQGPRELV 412 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~ 412 (1106)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 385
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=319.19 Aligned_cols=220 Identities=20% Similarity=0.237 Sum_probs=173.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++|+++||+||||||||||+++|+|..++. +..|.|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 367788887653 246999999999999999999999999999999999976532 2369999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.+... ...++.++|++|++.+++. |+.||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 87532 1345679999999988774 999999886543211 11222344567788888875321111111 134
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||+|||||++|||||+.+|++|+|||||+|||+.++..+.++|+++. +|+|||++||+++ ++.+.||++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 699999999999999999999999999999999999999999999985 5899999999997 47788999999975 78
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 224 i~~~~~~~ 231 (251)
T PRK14249 224 LVEYGRTG 231 (251)
T ss_pred EEEeCCHH
Confidence 99988765
No 386
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-35 Score=314.63 Aligned_cols=195 Identities=25% Similarity=0.388 Sum_probs=164.9
Q ss_pred ceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 001291 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1106)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999998 9999999988754332 357999999998899999999998
Q ss_pred HHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhh
Q 001291 249 FAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQ 328 (1106)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGq 328 (1106)
++...... . . .+....++.+++.+||++..++.+.. |||||
T Consensus 93 ~~~~~~~~-~--------~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 133 (211)
T cd03298 93 LGLSPGLK-L--------T-------------------------AEDRQAIEVALARVGLAGLEKRLPGE-----LSGGE 133 (211)
T ss_pred cccccccC-c--------c-------------------------HHHHHHHHHHHHHcCCHHHHhCCccc-----CCHHH
Confidence 75421100 0 0 00122456789999999888887754 99999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEc
Q 001291 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQG 407 (1106)
Q Consensus 329 kqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G 407 (1106)
|||++||++++.+|++++|||||+|||..++..+.+.|+++... .+.+|+.++|+..++.++||++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAE-TKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999999987543 3456666889999999999999999999998764
No 387
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-35 Score=316.84 Aligned_cols=204 Identities=27% Similarity=0.434 Sum_probs=173.8
Q ss_pred eeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCHHH
Q 001291 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
+|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765322 457999999998899999999
Q ss_pred HHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCC
Q 001291 246 TLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLS 325 (1106)
|+.++....+.. . .+....+..+++.+||.+..++.+.+ ||
T Consensus 91 ~l~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 131 (235)
T cd03299 91 NIAYGLKKRKVD----------K------------------------KEIERKVLEIAEMLGIDHLLNRKPET-----LS 131 (235)
T ss_pred HHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 999865332110 0 00112356688899999888888765 99
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEE
Q 001291 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 405 (1106)
||||||++||+|++.+|++++|||||+|||..++..+.+.|+++.... +++++.++|..+++.+++|+|++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEF-GVTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999875533 4556667788889999999999999999999
Q ss_pred EcCHHHHH
Q 001291 406 QGPRELVL 413 (1106)
Q Consensus 406 ~G~~~~~~ 413 (1106)
.|+++++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99988764
No 388
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=5.9e-35 Score=317.52 Aligned_cols=202 Identities=25% Similarity=0.318 Sum_probs=165.7
Q ss_pred EeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc--eeEEEEEEcCccCChhcc-cceEEEEccCCC--CCCCCC
Q 001291 871 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGDIRISGYPKKQETF-ARISGYCEQNDI--HSPFVT 945 (1106)
Q Consensus 871 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~g~v~q~~~--~~~~~t 945 (1106)
+|+|+||+|++|++++|+||||||||||+++|+|..++. +.+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999976531 158999999987654322 357999999984 446689
Q ss_pred HHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC---cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCC
Q 001291 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK---PLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1022 (1106)
Q Consensus 946 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~---~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEP 1022 (1106)
+.|++.+...... ...+..++.+.++++.+++. +..+..+ ..||+||||||+|||||+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG---KLSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC---ccHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999876543221 11233445688999999997 3444442 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1023 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1023 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
|+|||+.++..+.+.|++++++ |+|||++||+++ ++...||++++|++ |+++..|+..
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 211 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTVK 211 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999998764 899999999997 57788999999975 7899888754
No 389
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-35 Score=324.47 Aligned_cols=219 Identities=23% Similarity=0.376 Sum_probs=174.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ +++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 478889887763 124699999999999999999999999999999999998653 589999999876
Q ss_pred ChhcccceEEEEccCCCCC--CCCCHHHHHHHhhhhcCC-CCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 923 KQETFARISGYCEQNDIHS--PFVTVYESLFYSAWLRLP-PEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~--~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
.....++.++|++|++.+. ...++.+++.++...... ........+..++++++.+++.+..+..+ .+||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997643 234688887654211000 01112233445788999999987776654 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||++|||||+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999987 477889999766 4 7999998
Q ss_pred cCCC
Q 001291 1080 PLGH 1083 (1106)
Q Consensus 1080 ~~~~ 1083 (1106)
+..+
T Consensus 224 ~~~~ 227 (272)
T PRK15056 224 PTET 227 (272)
T ss_pred CHHh
Confidence 8654
No 390
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.2e-34 Score=318.17 Aligned_cols=213 Identities=25% Similarity=0.314 Sum_probs=170.7
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEECCccCCCCCc----cceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKL--DPSLKVSGRVTYNGHNMDEFVP----ERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|++..+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 566 9999999988754322 23489999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-cccccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMVG 317 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg 317 (1106)
+.+|++|++.+......... +.... ...+....++.+++.+||+ ...++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~------------------~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSAR------------------GEEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhccc------------------ccccc---------cHHHHHHHHHHHHHHcCCchhhcccccc
Confidence 99999999998654221000 00000 0011123467789999997 45666554
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh-cCeEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL-FDDII 396 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~-~D~vi 396 (1106)
. .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++... +|+++
T Consensus 143 ~----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 E----GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-P-DRSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred c----CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CcEEEEEEecHHHHHhhcCCeEE
Confidence 1 3999999999999999999999999999999999999999999998753 3 45666678888888888 89999
Q ss_pred EecCCeEEEEcCHHHHH
Q 001291 397 LLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++++.|+++++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999988654
No 391
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.9e-34 Score=320.35 Aligned_cols=225 Identities=25% Similarity=0.323 Sum_probs=177.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++... ..| ...++.+|+|+||+|++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~-~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSG-KHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESP--SQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---ccc-ccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecc
Confidence 67788887764100 000 00135699999999999999999999999999999999997653 5899999998753
Q ss_pred hh------cccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 001291 924 QE------TFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~~------~~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~ 994 (1106)
.. ..++.++|++|++. +.+..|+.|++.+..... ...........++++++.+++. ...+... .
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRP-----P 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCC-----c
Confidence 21 23567999999973 556789999987643211 1122334445688999999996 4555543 4
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
.||+|||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.||++++|+ +|
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~-~G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMD-NG 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEE-CC
Confidence 69999999999999999999999999999999999999999999998764 899999999987 4777899999997 47
Q ss_pred EEEEEecCCC
Q 001291 1074 REVYVGPLGH 1083 (1106)
Q Consensus 1074 ~~~~~G~~~~ 1083 (1106)
++++.|+..+
T Consensus 229 ~i~~~g~~~~ 238 (268)
T PRK10419 229 QIVETQPVGD 238 (268)
T ss_pred EEeeeCChhh
Confidence 9999998765
No 392
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.6e-35 Score=315.60 Aligned_cols=200 Identities=27% Similarity=0.430 Sum_probs=162.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCC--CCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHI--GEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1106)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999998 9999999987642 346799999987653 3489
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+||+.++...... .+.. + ..+....++.+++.+||++..++.+++
T Consensus 87 v~e~l~~~~~~~~~--~~~~--------------~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 132 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR--------------L--------------SKADKAKVDEALERVGLSELADRQIGE---- 132 (213)
T ss_pred HHHHHHhccccccc--cccC--------------C--------------CHHHHHHHHHHHHHcCCHHHHhCCccc----
Confidence 99999886431100 0000 0 001123467789999998878887765
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++++.++|+..++.+++|+|++|++|
T Consensus 133 -LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 133 -LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 999999999999999999999999999999999999999999998764 3 456777888899999999999999886
Q ss_pred EEEEc
Q 001291 403 IVYQG 407 (1106)
Q Consensus 403 iv~~G 407 (1106)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 393
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=321.47 Aligned_cols=216 Identities=24% Similarity=0.271 Sum_probs=175.9
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 919 (1106)
.++++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ..+++.++|++|++.+++. |+.||+.+...... ....+..++.++++++.+++.+ ..+..
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 165 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN--- 165 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC---
Confidence 87532 2345679999999887775 99999987643321 1112233456788899988853 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.+ +.|||++||+++ ++.+.||++++|+
T Consensus 166 --~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 241 (272)
T PRK14236 166 --AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY 241 (272)
T ss_pred --cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999975 799999999987 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++++.|+..
T Consensus 242 ~-G~i~~~g~~~ 252 (272)
T PRK14236 242 M-GKLVEYGDTD 252 (272)
T ss_pred C-CEEEecCCHH
Confidence 5 7899988754
No 394
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-35 Score=353.88 Aligned_cols=218 Identities=26% Similarity=0.309 Sum_probs=181.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++++++ ++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 70 (510)
T PRK09700 6 ISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINYN 70 (510)
T ss_pred EEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEECC
Confidence 67888887663 34699999999999999999999999999999999998653 4899999998764
Q ss_pred hh----cccceEEEEccCCCCCCCCCHHHHHHHhhhhc---CCC-CCChHHHHHHHHHHHHHcCCCcccccccCCCCCCC
Q 001291 924 QE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLR---LPP-EVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNG 995 (1106)
Q Consensus 924 ~~----~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~---~~~-~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~ 995 (1106)
.. ..++.+||++|++.+++.+||+||+.++.... ... ....+..++.+.++++.+++.+..+..+ .+
T Consensus 71 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 145 (510)
T PRK09700 71 KLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----AN 145 (510)
T ss_pred CCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----hh
Confidence 31 12346999999998888899999998754211 000 0122334456889999999987777664 46
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001291 996 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGRE 1075 (1106)
Q Consensus 996 LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~ 1075 (1106)
|||||||||+|||||+.+|+||||||||+|||+.++..+++.|++++++|+|||++|||++ .+...||++++|++ |++
T Consensus 146 LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~i 223 (510)
T PRK09700 146 LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GSS 223 (510)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999999878999999999987 47788999999985 789
Q ss_pred EEEecCCC
Q 001291 1076 VYVGPLGH 1083 (1106)
Q Consensus 1076 ~~~G~~~~ 1083 (1106)
++.|+..+
T Consensus 224 ~~~g~~~~ 231 (510)
T PRK09700 224 VCSGMVSD 231 (510)
T ss_pred eeecchhh
Confidence 99988764
No 395
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=328.75 Aligned_cols=211 Identities=21% Similarity=0.293 Sum_probs=169.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
.++|+|+|++|++|++++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||+|++.+
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35999999999999999999999999999999999998631 01289999999988531 225679999999876
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
+ ..||+||+.|+....+.. .. +.....++.+++.++|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~----------~~-----------------------~~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIN----------DR-----------------------KILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCC----------hH-----------------------HHHHHHHHHHHHHcCCcchhhhhhh
Confidence 6 589999999875432110 00 0011234556777777554445554
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
. .+..|||||||||+||||++.+|+||+|||||+|||+.+...+.++|+++.+ + .++++++|....+.+++|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEE
Confidence 3 4556999999999999999999999999999999999999999999998643 3 5677788889999999999999
Q ss_pred ecCCeEEEEcCHHHHH
Q 001291 398 LSDGQIVYQGPRELVL 413 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1106)
|++|+++..|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999985
No 396
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=320.09 Aligned_cols=205 Identities=19% Similarity=0.270 Sum_probs=166.0
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|+..++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 59999999999999999999999999999999999986 2111289999999887421 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhc-CCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----cccc
Q 001291 239 GEMTVRETLAFAARCQ-GVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1106)
+ +||+||+.++.... +.. . .+....++.+++.+||. +..+
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS----------R------------------------AEMDERVEWALTKAALWNEVKDKLH 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC----------H------------------------HHHHHHHHHHHHHcCCChhhHHHHh
Confidence 7 89999999875432 110 0 01112456778888874 3344
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
..++ .||||||||++||+||+.+|++|+|||||+|||..++..+.+.|+++. .+ ++|+.++|+..++.+++|
T Consensus 152 ~~~~-----~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d 223 (260)
T PRK10744 152 QSGY-----SLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSD 223 (260)
T ss_pred cCCC-----CCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCC
Confidence 4444 499999999999999999999999999999999999999999999873 23 566778888889999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
++++|++|+++..|+.+++.
T Consensus 224 ~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 224 YTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988774
No 397
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=4.7e-34 Score=358.74 Aligned_cols=212 Identities=28% Similarity=0.435 Sum_probs=176.9
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++|+||+|+|+. +++++|+|+||+|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 36899999999852 234699999999999999999999999999999999998764 58999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccc-------cccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-------SLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~~~~ 991 (1106)
+++ ..+++.++||+|++.++. .|++||+.++. .+. .++.++++++.+++.+..+ ..++..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~----~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYA----DDEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCC----CHHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 754 456788999999998876 69999998752 112 2344677888887765433 334433
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
| .+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|+|||+++ ..+.||+|++|++
T Consensus 599 G-~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 G-RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 3 4699999999999999999999999999999999999999999999886 4899999999986 4578999999985
Q ss_pred CCEEEEEecC
Q 001291 1072 GGREVYVGPL 1081 (1106)
Q Consensus 1072 gG~~~~~G~~ 1081 (1106)
|++++.|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 799999874
No 398
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=321.03 Aligned_cols=207 Identities=21% Similarity=0.314 Sum_probs=166.9
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|. ...+|+|+++|.++... ..++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5999999999999999999999999999999999998741 01289999999887531 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----cccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1106)
+. ||.||+.|+....+.... . .+....++.+++.+||.+ ..++
T Consensus 113 ~~-tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 159 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRLHE 159 (267)
T ss_pred CC-cHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHhhC
Confidence 74 999999987543321000 0 001124567888899964 2344
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|++++|+..++..++|+
T Consensus 160 ~~~-----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~ 231 (267)
T PRK14235 160 PGT-----GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQR 231 (267)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCE
Confidence 444 4999999999999999999999999999999999999999999998743 3 4666678888999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
+++|++|+++.+|+.+++.
T Consensus 232 v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 232 TAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 399
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=320.78 Aligned_cols=209 Identities=26% Similarity=0.388 Sum_probs=172.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC---ccceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 241 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|+..+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 36999999999999999999999999999999999999987 999999998765432 135699999998888889
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||.||+.|+..... ..+ ... ..+....++.+++.+||++..++.+++
T Consensus 92 tv~~~i~~~~~~~~--~~~----------------~~~------------~~~~~~~~~~~l~~~~l~~~~~~~~~~--- 138 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLW----------------GRL------------SAEDNARVNQAMEQTRINHLADRRLTD--- 138 (255)
T ss_pred cHHHHHHhccchhh--hhc----------------cCC------------CHHHHHHHHHHHHHcCCHHHHcCCccc---
Confidence 99999988631000 000 000 000123456788999998888887765
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. . +++++.++|+..++.+++|++++|++|
T Consensus 139 --LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 139 --LSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999999999999999998754 3 456677788889999999999999999
Q ss_pred eEEEEcCHHHHH
Q 001291 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999988763
No 400
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.3e-34 Score=320.19 Aligned_cols=208 Identities=27% Similarity=0.417 Sum_probs=173.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 36999999999999999999999999999999999999997 9999999988765322 34699999998778889
Q ss_pred CHHHHHHHHHH-hcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 242 TVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 242 TV~E~l~f~~~-~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
||+||+.++.. .... . . .+ ..+....++.+++.+||.+..++.+++
T Consensus 91 tv~e~l~~~~~~~~~~----------~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (256)
T TIGR03873 91 TVRDVVALGRIPHRSL----------W------A-GD--------------SPHDAAVVDRALARTELSHLADRDMST-- 137 (256)
T ss_pred CHHHHHHhcchhhhhh----------c------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCccc--
Confidence 99999988531 1000 0 0 00 001112456788999998888887765
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
||||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+++|+|++|++
T Consensus 138 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 212 (256)
T TIGR03873 138 ---LSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDG 212 (256)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999998753 3 45677788888999999999999999
Q ss_pred CeEEEEcCHHHHH
Q 001291 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|+++..|+.+++.
T Consensus 213 G~i~~~g~~~~~~ 225 (256)
T TIGR03873 213 GRVVAAGPPREVL 225 (256)
T ss_pred CCEEEecCHHHhh
Confidence 9999999988763
No 401
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=319.10 Aligned_cols=220 Identities=19% Similarity=0.220 Sum_probs=175.8
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC--c-eeEEEEEEc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGDIRIS 918 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~-~~~G~i~i~ 918 (1106)
..+..+.+++++ ++..+|+|+||+|++||++||+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFY-------------GNFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEe-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 346666666554 345799999999999999999999999999999999997643 1 258999999
Q ss_pred CccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 001291 919 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1106)
Q Consensus 919 g~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~ 993 (1106)
|.+... ...++.++|++|++.++ .+|+.||+.++...+. . .......+.++++.+++.+....... ...
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCc
Confidence 987532 13356799999998776 5999999988754331 1 12234567889999998643222111 123
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe---
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK--- 1070 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~--- 1070 (1106)
..||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.||++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 5699999999999999999999999999999999999999999999985 4799999999997 4778999999997
Q ss_pred ----cCCEEEEEecCC
Q 001291 1071 ----RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ----~gG~~~~~G~~~ 1082 (1106)
++|++++.|+..
T Consensus 226 ~~~~~~G~i~~~g~~~ 241 (261)
T PRK14263 226 SQGTRTGYLVEMGPTA 241 (261)
T ss_pred ccccCCceEEEeCCHH
Confidence 468999998754
No 402
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.2e-35 Score=312.37 Aligned_cols=201 Identities=23% Similarity=0.293 Sum_probs=170.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+++++||++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 478888887653 24699999999999999999999999999999999998663 479999999876
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
.....++.++|++|++.+++.+|+.||+.+....+. . ..++.++++++.+++.+..+..+ ..||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543334568999999888888899999987643321 1 12345678899999987766654 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
|++|||+++.+|++|+|||||+|||+.+++.+++.|+++.++|+|||++||+++ ++.+.||+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999997 5888999999985
No 403
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.7e-35 Score=326.27 Aligned_cols=212 Identities=20% Similarity=0.290 Sum_probs=173.3
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.|+|+++.++. +...+|+||||+|++||+++|+|+||||||||+++|+|... .+|.|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3678899887742 12358999999999999999999999999999999999864 369999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCC------CCC
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGL------PGV 993 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~------~g~ 993 (1106)
.. ...++.++||+|++.+++ .|++||+.+.. ... ++.++++++.++|.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234567999999998876 59999995321 011 23467888999998766654321 123
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
..||+|||||++|||||+.+|+||+|||||++||+.+...+++.|+++. .++|||+|||+++ .+ ..||++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 4699999999999999999999999999999999999999999999875 4899999999986 34 46999999975 7
Q ss_pred EEEEEecCCC
Q 001291 1074 REVYVGPLGH 1083 (1106)
Q Consensus 1074 ~~~~~G~~~~ 1083 (1106)
++++.|++.+
T Consensus 213 ~i~~~g~~~~ 222 (275)
T cd03289 213 KVRQYDSIQK 222 (275)
T ss_pred eEeecCCHHH
Confidence 9999998754
No 404
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-35 Score=327.90 Aligned_cols=206 Identities=20% Similarity=0.303 Sum_probs=169.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCC----C----CccceEEEEcCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDE----F----VPERTAAYISQHDN 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~ 236 (1106)
..+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35999999999999999999999999999999999999997 9999999987642 1 12357999999863
Q ss_pred -CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-ccccc
Q 001291 237 -HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADT 314 (1106)
Q Consensus 237 -~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1106)
.+...||+||+.|+....+.. . .+....++.+++.++|+ ...++
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~----------~------------------------~~~~~~~~~ll~~~~L~~~~~~~ 146 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGEN----------K------------------------QEAYKKVPELLKLVQLPEDYVKR 146 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCC----------H------------------------HHHHHHHHHHHHHcCCChhHhcC
Confidence 233469999999865322110 0 00112356678899994 56777
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|++++|+.+++.++||+
T Consensus 147 ~~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~ 220 (289)
T PRK13645 147 SPFE-----LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADE 220 (289)
T ss_pred Chhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCE
Confidence 6655 9999999999999999999999999999999999999999999987653 345666688888999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 221 VIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 405
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=318.56 Aligned_cols=216 Identities=24% Similarity=0.320 Sum_probs=173.7
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--Cc-eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 919 (1106)
.+.++|+++.++ .+++|+|+||+|++||++||+|+||||||||+++|+|..+ +. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 367888887763 2469999999999999999999999999999999999764 11 2589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.++|++|++.+++ .|++||+.+....+. ....+..+..++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 123557999999988775 799999987643221 1112233456788899998852 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.||++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 346999999999999999999999999999999999999999999999854 799999999997 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |+++..|+..
T Consensus 221 ~-G~i~~~~~~~ 231 (251)
T PRK14251 221 N-GDLIEAGPTE 231 (251)
T ss_pred C-CEEEEeCCHH
Confidence 5 7899888753
No 406
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=322.51 Aligned_cols=216 Identities=21% Similarity=0.214 Sum_probs=172.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--C-ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g 919 (1106)
.+.++|+++.++ +..+|+|+||+|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 478999988764 2358999999999999999999999999999999999754 1 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC----cccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----PLRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~ 990 (1106)
.+... ..+++.++|++|++.+++ .|+.||+.++...+. ....+..+..+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87531 234567999999988776 599999987643221 111222344567777777543 222322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 799999999987 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++++.|+..
T Consensus 241 ~-G~i~~~g~~~ 251 (271)
T PRK14238 241 N-GYVNEYDDTD 251 (271)
T ss_pred C-CEEEEeCCHH
Confidence 5 7899988765
No 407
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=318.03 Aligned_cols=216 Identities=23% Similarity=0.300 Sum_probs=172.5
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--Cc-eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~~-~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|.+||++||+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 367888887663 2469999999999999999999999999999999999643 21 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.++++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87531 234567999999988777 6999999876433211 112222345677888887642 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.||++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 589999999997 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |+++..|+..
T Consensus 222 ~-G~i~~~~~~~ 232 (252)
T PRK14255 222 T-GNLIEFADTK 232 (252)
T ss_pred C-CEEEEeCCHH
Confidence 5 7899988754
No 408
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=323.55 Aligned_cols=216 Identities=20% Similarity=0.266 Sum_probs=173.9
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--C-ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g 919 (1106)
.+.++++++.++ +..+|+|+||+|++||+++|+|+||||||||+++|+|... + .+..|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578899988763 2359999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC----cccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK----PLRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~----~~~~~~~~~ 990 (1106)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. .......++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFP-KSIFDNIAYGPRLHG--INDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCc-cCHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 123567999999988776 499999988643321 111223345677888888874 222332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999865 689999999997 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |++++.|+..
T Consensus 256 ~-G~i~~~g~~~ 266 (286)
T PRK14275 256 E-GVLVEHAPTA 266 (286)
T ss_pred C-CEEEEeCCHH
Confidence 5 7899988754
No 409
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.2e-34 Score=357.80 Aligned_cols=211 Identities=27% Similarity=0.407 Sum_probs=173.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.|+||+|+|+.. +++++|+|+||+|+|||++||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 478 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 545 (711)
T TIGR00958 478 LIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVPL 545 (711)
T ss_pred eEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEEH
Confidence 58999999998631 134699999999999999999999999999999999998764 589999999987
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccc-------cccCCCC
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQ-------SLVGLPG 992 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~~~~g 992 (1106)
++ ..+++.++||+|++.++. .|++||+.++. .+.+ ++.+.++++..++.+..+ ..++..|
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~-----~~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL-----TDTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred HhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC-----CCCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 54 446678999999998775 79999998763 1111 345678888888776543 3344333
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
.+||||||||++|||||+++|+||+||||||+||+++++.+++ .. ..+++|+|+|||+++ ..+.||+|++|++
T Consensus 616 -~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~- 688 (711)
T TIGR00958 616 -SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK- 688 (711)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC-
Confidence 4699999999999999999999999999999999999999998 22 235899999999986 4678999999985
Q ss_pred CEEEEEecCC
Q 001291 1073 GREVYVGPLG 1082 (1106)
Q Consensus 1073 G~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 689 G~ive~Gt~~ 698 (711)
T TIGR00958 689 GSVVEMGTHK 698 (711)
T ss_pred CEEEEeeCHH
Confidence 7999999853
No 410
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=322.29 Aligned_cols=217 Identities=19% Similarity=0.226 Sum_probs=174.3
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRIS 918 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~ 918 (1106)
..+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+. +..|.|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3588899988763 246999999999999999999999999999999999975321 247999999
Q ss_pred CccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccC
Q 001291 919 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVG 989 (1106)
Q Consensus 919 g~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~ 989 (1106)
|.+... ..+++.++|++|++.+++ .|+.||+.+....+. . ....++.+.++++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFP-KSIYENIAFAPRANG---Y-KGNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCcccc-ccHHHHHHhHHHhcC---c-hHHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987531 234567999999988776 499999987643221 1 1122344677788888742 22222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEE
Q 001291 990 LPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1106)
Q Consensus 990 ~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l 1069 (1106)
+..||+|||||++|||||+.+|++|||||||+|||+.++..+.++|+++.+ ++|||++||+++ ++.+.||++++|
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 346999999999999999999999999999999999999999999999865 799999999997 578899999999
Q ss_pred e--------cCCEEEEEecCCC
Q 001291 1070 K--------RGGREVYVGPLGH 1083 (1106)
Q Consensus 1070 ~--------~gG~~~~~G~~~~ 1083 (1106)
+ +.|++++.|+..+
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~~~ 255 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPTEQ 255 (274)
T ss_pred ecccccccccCceEEEeCCHHH
Confidence 7 2589999998753
No 411
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=316.97 Aligned_cols=207 Identities=21% Similarity=0.315 Sum_probs=167.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCCC-----ccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35999999999999999999999999999999999998751 013899999999875321 24569999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----cccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1106)
++ +||+||+.|.....+.... .+....++.+++.+||. +..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHhh
Confidence 77 8999999987543221000 00112355678888874 2344
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
..++ .||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.. + .++++++|+..++.++||
T Consensus 143 ~~~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d 214 (251)
T PRK14270 143 KSAL-----KLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSD 214 (251)
T ss_pred CCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcC
Confidence 4444 4999999999999999999999999999999999999999999998753 3 456667788889999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999998874
No 412
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=321.24 Aligned_cols=214 Identities=22% Similarity=0.273 Sum_probs=173.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 919 (1106)
.+.++++++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478899987763 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.++|++|++.+++. |+.||+.+....+. .. ...+..++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YD-GDIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---Cc-HHHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999877774 99999987654321 11 123456788999998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEE-EE
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1069 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~-~l 1069 (1106)
+.+||+|||||++|||||+.+|+||||||||+|||+.++..+.++|+++++ ++|||++||+++ ++.+.||+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 346999999999999999999999999999999999999999999999976 489999999987 4777899976 45
Q ss_pred ecCCEEEEEecCC
Q 001291 1070 KRGGREVYVGPLG 1082 (1106)
Q Consensus 1070 ~~gG~~~~~G~~~ 1082 (1106)
+ .|++++.|+..
T Consensus 254 ~-~G~i~~~g~~~ 265 (285)
T PRK14254 254 T-GGELVEFDDTD 265 (285)
T ss_pred e-CCEEEEeCCHH
Confidence 6 57899988753
No 413
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.1e-34 Score=322.28 Aligned_cols=207 Identities=23% Similarity=0.265 Sum_probs=171.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCC--CCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN--HIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999998 9999999988753211 246999999864 567
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc-ccccccccC
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD-ICADTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1106)
.+||.|++.+..+.... .. ..+....++.+++.+||. ...++.+.+
T Consensus 103 ~~tv~~~l~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 149 (267)
T PRK15112 103 RQRISQILDFPLRLNTD---------LE------------------------PEQREKQIIETLRQVGLLPDHASYYPHM 149 (267)
T ss_pred chhHHHHHHHHHHhccC---------CC------------------------HHHHHHHHHHHHHHcCCChHHHhcCchh
Confidence 88999999886543210 00 001122456789999994 566766654
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|++++|+..++..+||++++|
T Consensus 150 -----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 150 -----LAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEK-QGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred -----cCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999987643 3456666888889999999999999
Q ss_pred cCCeEEEEcCHHHHH
Q 001291 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 414
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.2e-34 Score=350.71 Aligned_cols=220 Identities=24% Similarity=0.356 Sum_probs=179.6
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++++|+||||+|++|+++||+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 45677777653 34699999999999999999999999999999999997654235899999998764
Q ss_pred hh----cccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCC-CCChHHHHHHHHHHHHHcCCCccc-ccccCCCCCCCCC
Q 001291 924 QE----TFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP-EVNSETRKMFIEEVMELVELKPLR-QSLVGLPGVNGLS 997 (1106)
Q Consensus 924 ~~----~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~-~~~~~~~~~~v~~~l~~~~l~~~~-~~~~~~~g~~~LS 997 (1106)
.. ..++.+||++|++.+++.+|+.||+.+....+... ....+..++.++++++.+++.+.. +..+ .+||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPV-----GDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCch-----hhCC
Confidence 31 12356999999998888899999998764322111 112233445688999999997654 3333 4699
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 998 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 998 ~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||||+|||||+.+|+||||||||+|||+.++..+++.|++++++|+|||++|||++ ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999987 47788999999985 68999
Q ss_pred EecCCC
Q 001291 1078 VGPLGH 1083 (1106)
Q Consensus 1078 ~G~~~~ 1083 (1106)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 887764
No 415
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=318.11 Aligned_cols=216 Identities=26% Similarity=0.273 Sum_probs=174.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+|+||+|++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 477888887763 246999999999999999999999999999999999964321 2479999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGL 990 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~ 990 (1106)
.+... ...++.++|++|++.+++ .||+||+.|....+. .......+..+.++++.+++.+ ..+..
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFP-KSIYENVAYGPRIHG--EKNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCc-ccHHHHHHhhHHhcC--CCCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87542 233567999999988877 499999988754321 1122334456788888888743 22232
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 991 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 991 ~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+..||+|||||++|||||+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 346999999999999999999999999999999999999999999999875 689999999987 4778899999998
Q ss_pred cCCEEEEEecCC
Q 001291 1071 RGGREVYVGPLG 1082 (1106)
Q Consensus 1071 ~gG~~~~~G~~~ 1082 (1106)
+ |+++..|+..
T Consensus 223 ~-G~i~~~g~~~ 233 (253)
T PRK14261 223 L-GKLIEFDKTT 233 (253)
T ss_pred C-CEEEEcCCHH
Confidence 5 7899988754
No 416
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.3e-34 Score=311.05 Aligned_cols=199 Identities=22% Similarity=0.330 Sum_probs=167.4
Q ss_pred eeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC-ccceEEEEcCCCCCCCCCCHHH
Q 001291 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-PERTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 457999999999999999999999999999999999998 999999999875432 2467999999998999999999
Q ss_pred HHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCC
Q 001291 246 TLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLS 325 (1106)
|+.+...... ... .+....++.+++.+||++..++.+.+ ||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLPEQ-----LS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCccc-----CC
Confidence 9987542110 000 00112356789999998888887765 99
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEE
Q 001291 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~ 405 (1106)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..+++|+.++|+..++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999998754 335666668888889999999999999999998
Q ss_pred EcC
Q 001291 406 QGP 408 (1106)
Q Consensus 406 ~G~ 408 (1106)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 417
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=315.81 Aligned_cols=202 Identities=24% Similarity=0.409 Sum_probs=170.9
Q ss_pred ceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 001291 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1106)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999997 9999999998754322 357999999998899999999998
Q ss_pred HHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCCCChhh
Q 001291 249 FAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRGVSGGQ 328 (1106)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rgLSGGq 328 (1106)
+.... ... .. ......++.+++.+||++..++.+.. |||||
T Consensus 94 ~~~~~-~~~--------~~-------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLK--------LN-------------------------AAQREKLHAIARQMGIEDLLARLPGQ-----LSGGQ 134 (232)
T ss_pred ccccc-ccC--------CC-------------------------HHHHHHHHHHHHHcCcHHHHhCCccc-----CCHHH
Confidence 75321 000 00 00123467789999999888888765 99999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeEEEEcC
Q 001291 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQIVYQGP 408 (1106)
Q Consensus 329 kqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~iv~~G~ 408 (1106)
|||++||++++.+|++++|||||+|||..++..+.+.|+++.+.. +++++.++|+..++.+++|+|++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999876533 4556667888889999999999999999999999
Q ss_pred HHHHHH
Q 001291 409 RELVLE 414 (1106)
Q Consensus 409 ~~~~~~ 414 (1106)
.+++.+
T Consensus 214 ~~~~~~ 219 (232)
T PRK10771 214 TDELLS 219 (232)
T ss_pred HHHHHh
Confidence 887753
No 418
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1e-33 Score=355.36 Aligned_cols=213 Identities=26% Similarity=0.398 Sum_probs=175.7
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++|+||+|.|+. +++.+|+|+||+|++|+++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEe
Confidence 36899999998852 224599999999999999999999999999999999998764 58999999998
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~~~ 991 (1106)
.++ ..+++.+|||+|++.+++ .|++||+.++. .+. .++.+.++++..++.+.. +..++..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~----~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGA----PFEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCC----CHHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 754 456778999999988775 69999997642 112 133456777777766543 3334433
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. .|+|+|++||+++ ..+.||++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 35799999999999999999999999999999999999999999999884 5899999999996 3467999999985
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 667 -G~i~~~g~~~ 676 (694)
T TIGR01846 667 -GQIAESGRHE 676 (694)
T ss_pred -CEEEEeCCHH
Confidence 7999999754
No 419
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=318.27 Aligned_cols=207 Identities=22% Similarity=0.338 Sum_probs=167.8
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|.- ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 59999999999999999999999999999999999986410 1289999999876421 1235799999998889
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----ccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1106)
+.+||+||+.++....+... . .+....++.+++.+||. +..++
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRN---------K------------------------KDLDELVEKSLRGANLWNEVKDRLDK 144 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhhHhhC
Confidence 99999999998754321000 0 01122456678888884 33455
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.++ .|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+++|+
T Consensus 145 ~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~ 216 (258)
T PRK14241 145 PGG-----GLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQ 216 (258)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999998742 3 4666688888999999999
Q ss_pred EEEec------CCeEEEEcCHHHHH
Q 001291 395 IILLS------DGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~------~G~iv~~G~~~~~~ 413 (1106)
|++|+ +|++++.|+++++.
T Consensus 217 i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 217 TAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEecccCCCCceEEecCCHHHHH
Confidence 99996 79999999998774
No 420
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.5e-35 Score=321.01 Aligned_cols=210 Identities=26% Similarity=0.388 Sum_probs=161.1
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++. ++..+|+|+||++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehHh
Confidence 46777766531 124599999999999999999999999999999999998653 47999999987532
Q ss_pred ---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHH-----HHHHHHHHHc--CCCcccccccCCCCCC
Q 001291 925 ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRK-----MFIEEVMELV--ELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 925 ---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~v~~~l~~~--~l~~~~~~~~~~~g~~ 994 (1106)
..+++.++|++|++.+++ .||.||+.+... ........ ..++++++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CC
Confidence 234567999999987664 699999976431 11111110 0112233333 233222222 35
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||++||+++ ++ +.||++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999986 4899999999997 35 57999999985 78
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 214 i~~~~~~~ 221 (237)
T cd03252 214 IVEQGSHD 221 (237)
T ss_pred EEEEcCHH
Confidence 99988753
No 421
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.8e-34 Score=315.16 Aligned_cols=206 Identities=26% Similarity=0.413 Sum_probs=174.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++|+|+|+++.+|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999999987 9999999988764332 3579999999988889999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.+.....+.. . ......++.+++.++|....++.+++
T Consensus 90 ~enl~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHP----------K------------------------AKIKARVEELLELVQLEGLGDRYPNQ----- 130 (237)
T ss_pred HHHHHhHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCCHhHhhCChhh-----
Confidence 99999875432110 0 00112356788999998877877765
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCeE
Q 001291 324 VSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~i 403 (1106)
||||||||++||++++.+|++++|||||+|||..+...+.+.|+++.. ..+.+++.++|...++.+++|+|++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3245566677888889999999999999999
Q ss_pred EEEcCHHHHH
Q 001291 404 VYQGPRELVL 413 (1106)
Q Consensus 404 v~~G~~~~~~ 413 (1106)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988774
No 422
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-35 Score=309.06 Aligned_cols=196 Identities=27% Similarity=0.411 Sum_probs=172.5
Q ss_pred ceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-----C--ccceEEEEcCCCCCCCCCC
Q 001291 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-----V--PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|+|.+||..+.+. . .+|.+|||+|+-.+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 477777765799999999999999999999999999 99999999876322 1 2588999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|+-||.|+...-. ....+++...||++|..+.+.+.
T Consensus 93 VrgNL~YG~~~~~----------------------------------------~~~fd~iv~lLGI~hLL~R~P~~---- 128 (352)
T COG4148 93 VRGNLRYGMWKSM----------------------------------------RAQFDQLVALLGIEHLLDRYPGT---- 128 (352)
T ss_pred Eecchhhhhcccc----------------------------------------hHhHHHHHHHhCcHHHHhhCCCc----
Confidence 9999999864210 11246788999999999998876
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
|||||||||+|||||++.|++|+||||.+.||-....+|+-.|.++... -+.-|+.++|...|+..++|+|++|++|+
T Consensus 129 -LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e-~~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDE-INIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred -cCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHh-cCCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 9999999999999999999999999999999999999999999998764 45667789999999999999999999999
Q ss_pred EEEEcCHHHHHH
Q 001291 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+...|+.+++..
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999999853
No 423
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=7.2e-35 Score=313.33 Aligned_cols=195 Identities=25% Similarity=0.390 Sum_probs=164.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCC-----CccceEEEEcCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 239 (1106)
.++|+|+|++++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 35999999999999999999999999999999999999987 99999999887421 12457999999998888
Q ss_pred CCCHHHHHHHHHH-hcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 240 EMTVRETLAFAAR-CQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
.+||+||+.++.. .++.. ..+....++.+++.+||++..++.+.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 135 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS----------------------------------KAEAEERALELLEKVGLADKADAYPAQ 135 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhhCccc
Confidence 9999999988642 11100 001122456788999998888887765
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+|++|
T Consensus 136 -----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 136 -----LSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999998764 3 455666888999999999999999
Q ss_pred cCCeE
Q 001291 399 SDGQI 403 (1106)
Q Consensus 399 ~~G~i 403 (1106)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 424
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-34 Score=350.43 Aligned_cols=212 Identities=21% Similarity=0.307 Sum_probs=180.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++|+++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 378889988764 24699999999999999999999999999999999998653 489999999875
Q ss_pred Chh---c-ccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 923 KQE---T-FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~~---~-~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
... . .++.+||++|++.+++.+||.||+.|.... ....++.+.++++.+++.+..+..+ .+|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~-------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPK-------RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhccccc-------chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 321 1 124589999999888899999999875311 1233456789999999987777664 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||||||+|||||+.+|+||||||||+|||+.++..+++.|++++++|+|||++|||++ .+.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999987 47788999999985 789999
Q ss_pred ecCCC
Q 001291 1079 GPLGH 1083 (1106)
Q Consensus 1079 G~~~~ 1083 (1106)
|+..+
T Consensus 222 g~~~~ 226 (510)
T PRK15439 222 GKTAD 226 (510)
T ss_pred cChHH
Confidence 88764
No 425
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=317.36 Aligned_cols=211 Identities=20% Similarity=0.270 Sum_probs=167.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35999999999999999999999999999999999998641 01389999999887531 124579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++ .||+||+.++.+..+... ..+....+..+++.++|..+.+....
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD---------------------------------KKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 77 699999998754321100 00112345667888888543222221
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
...+.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+.+++.++||++++
T Consensus 159 -~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 159 -KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred -CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEE
Confidence 2334599999999999999999999999999999999999999999999873 23 5667778888899999999999
Q ss_pred ecCCeEEEEcCHHHHH
Q 001291 398 LSDGQIVYQGPRELVL 413 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1106)
|++|++++.|+++++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999998874
No 426
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=315.27 Aligned_cols=205 Identities=19% Similarity=0.263 Sum_probs=167.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC---CCCCceeEEEECCccCCCCC---ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD---PSLKVSGRVTYNGHNMDEFV---PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~ 238 (1106)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++ |+ +|+|+++|+++.... .++.++|++|++.++
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~ 91 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVF 91 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCccc
Confidence 369999999999999999999999999999999999975 45 899999999876432 245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----cccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1106)
+ .||+||+.++...++... . .......++.+++.+||.. ..+.
T Consensus 92 ~-~tv~eni~~~~~~~~~~~-------------------~-------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 138 (246)
T PRK14269 92 V-KSIYENISYAPKLHGMIK-------------------N-------------KDEEEALVVDCLQKVGLFEEVKDKLKQ 138 (246)
T ss_pred c-ccHHHHhhhHHhhcCccc-------------------C-------------hHHHHHHHHHHHHHcCCChhhhHHhcC
Confidence 6 699999998754322100 0 0011223567888999853 2333
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
. .+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. . ++++++++|+..++.+++|+
T Consensus 139 ~-----~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~ 210 (246)
T PRK14269 139 N-----ALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--H-NLSMIMVTHNMQQGKRVADY 210 (246)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--C-CCEEEEEecCHHHHHhhCcE
Confidence 3 34599999999999999999999999999999999999999999999864 2 45677788889999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|++++.|+.+++.
T Consensus 211 i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 211 TAFFHLGELIEFGESKEFF 229 (246)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 427
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1e-34 Score=308.83 Aligned_cols=184 Identities=27% Similarity=0.329 Sum_probs=158.1
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCCH
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVTV 946 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~g~v~q~~~~~~~~tv 946 (1106)
+.+|+|+||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++..|+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 4699999999999999999999999999999999998663 47999999977532 2345679999999888888999
Q ss_pred HHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001291 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1106)
Q Consensus 947 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgL 1026 (1106)
+||+.+.... . .++.++++++.+++.+..+..+ .+||+|||||++|||||+.+|++|+|||||+||
T Consensus 91 ~e~l~~~~~~-------~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD-------H--SDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc-------c--cHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999775311 0 2345788999999987766553 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEE
Q 001291 1027 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1106)
Q Consensus 1027 D~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l 1069 (1106)
|+.++..+++.|+++.++|+|+|++||++. ++...+|+++.+
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999998777999999999986 577889998876
No 428
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.1e-34 Score=315.56 Aligned_cols=203 Identities=23% Similarity=0.273 Sum_probs=167.9
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCC----CCCceeEEEECCccCCCCCc-cceEEEEcCCCC--CC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP----SLKVSGRVTYNGHNMDEFVP-ERTAAYISQHDN--HI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~ 238 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|.++..... ++.++||+|++. +.
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~ 93 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFN 93 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccC
Confidence 589999999999999999999999999999999999988 6 9999999988753322 257999999864 44
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc---ccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI---CADTM 315 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~ 315 (1106)
+.+|+.+++.+.++..+.. . ....++.+++.+||.+ ..++.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~----------~--------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (254)
T PRK10418 94 PLHTMHTHARETCLALGKP----------A--------------------------DDATLTAALEAVGLENAARVLKLY 137 (254)
T ss_pred ccccHHHHHHHHHHHcCCC----------h--------------------------HHHHHHHHHHHcCCCChhhhhhcC
Confidence 6689999987654322110 0 0123566888999976 34555
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+++ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+++|++
T Consensus 138 ~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v 211 (254)
T PRK10418 138 PFE-----MSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDV 211 (254)
T ss_pred Ccc-----cCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEE
Confidence 544 9999999999999999999999999999999999999999999987653 3456667788889999999999
Q ss_pred EEecCCeEEEEcCHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 212 AVMSHGRIVEQGDVETLF 229 (254)
T ss_pred EEEECCEEEEecCHHHHh
Confidence 999999999999988774
No 429
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=315.52 Aligned_cols=208 Identities=22% Similarity=0.299 Sum_probs=168.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+...+|+|.++|.++... ..++.++|++|+..+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3111289999999887431 124679999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----ccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CAD 313 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 313 (1106)
++.+||+||+.++.+..+... . .+....++.+++.+||.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN---------R------------------------SEADEIVESSLKRVALWDEVKDRLK 143 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC---------H------------------------HHHHHHHHHHHHHcCCchhhhHHhh
Confidence 999999999988654321000 0 001123566788888854 234
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
+.++ .||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.. + ++|++++|+..++.++||
T Consensus 144 ~~~~-----~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d 215 (252)
T PRK14256 144 SNAM-----ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSD 215 (252)
T ss_pred CCcC-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCC
Confidence 4444 4999999999999999999999999999999999999999999998753 3 566777888899999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
++++|++|+++..|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 216 YTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 430
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.8e-35 Score=361.77 Aligned_cols=213 Identities=29% Similarity=0.433 Sum_probs=177.7
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++|+||+|.|+. ++++|+|+||+++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 46999999999862 34699999999999999999999999999999999998764 58999999988
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-------ccccccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-------LRQSLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-------~~~~~~~~~ 991 (1106)
+++ ..+++.++||+|++.++. -|++||+.++.. +.. ++.++++++..++.+ -.|..+|..
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~-----~at----~eei~~a~k~a~~~d~I~~lp~g~dt~vge~ 462 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRP-----DAT----DEEIEEALKLANAHEFIANLPDGYDTIVGER 462 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccceecCC
Confidence 754 456788999999998887 899999988731 122 234566666655443 245566643
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
| ..||||||||++||||++++|+||+||||||+||+++++.|++.++++. +|+|+|+|+|+++. .+.||+|++|++
T Consensus 463 G-~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst--i~~aD~IiVl~~ 538 (567)
T COG1132 463 G-VNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST--IKNADRIIVLDN 538 (567)
T ss_pred C-ccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH--HHhCCEEEEEEC
Confidence 4 4699999999999999999999999999999999999999999999876 57999999999973 456999999986
Q ss_pred CCEEEEEecCCC
Q 001291 1072 GGREVYVGPLGH 1083 (1106)
Q Consensus 1072 gG~~~~~G~~~~ 1083 (1106)
|++++.|+..+
T Consensus 539 -G~i~e~G~h~e 549 (567)
T COG1132 539 -GRIVERGTHEE 549 (567)
T ss_pred -CEEEEecCHHH
Confidence 68999998643
No 431
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.7e-34 Score=316.81 Aligned_cols=207 Identities=24% Similarity=0.348 Sum_probs=169.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCcc-----CCCCCc-------cceEEEEc
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHN-----MDEFVP-------ERTAAYIS 232 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~ 232 (1106)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35999999999999999999999999999999999999998 9999999987 544321 23699999
Q ss_pred CCCC--CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc
Q 001291 233 QHDN--HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI 310 (1106)
Q Consensus 233 Q~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 310 (1106)
|++. +++.+|+.||+.+.....+. . + ..+....++++++.+|+..
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~--~--------------------~-----------~~~~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGA--R--------------------H-----------YGDIRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhcc--C--------------------c-----------HHHHHHHHHHHHHHcCCCh
Confidence 9863 57788999999764321110 0 0 0001224567889999974
Q ss_pred -cccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHH
Q 001291 311 -CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETY 389 (1106)
Q Consensus 311 -~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~ 389 (1106)
..++.+++ |||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++... .+.+|+.++|+..++.
T Consensus 143 ~~~~~~~~~-----LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~isH~~~~~~ 216 (258)
T PRK11701 143 ARIDDLPTT-----FSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRE-LGLAVVIVTHDLAVAR 216 (258)
T ss_pred hHHhCCCcc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHHH
Confidence 56666654 9999999999999999999999999999999999999999999987543 3566777889999999
Q ss_pred hhcCeEEEecCCeEEEEcCHHHHH
Q 001291 390 NLFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 390 ~~~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
+++|+|++|++|++++.|+++++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999988764
No 432
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-34 Score=308.82 Aligned_cols=199 Identities=22% Similarity=0.297 Sum_probs=163.2
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 45667776553 34699999999999999999999999999999999998663 5899999998753
Q ss_pred h--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHH
Q 001291 924 Q--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQR 1001 (1106)
Q Consensus 924 ~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqr 1001 (1106)
. ...++.++|++|++.+++.+|+.||+.+....+. . ..++.++++++.+++.+..+..+ ..||+|||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHH
Confidence 2 2345678999999888888999999987653321 1 22346788999999987766653 46999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEE
Q 001291 1002 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1069 (1106)
Q Consensus 1002 qrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l 1069 (1106)
||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+.+..+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999987 354434555544
No 433
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=315.68 Aligned_cols=206 Identities=18% Similarity=0.266 Sum_probs=166.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCC---CCCCCCceeEEEECCccCCCCC-----ccceEEEEcCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGK---LDPSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDN 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~ 236 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|. ++|. ..+|+|.++|.++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 3599999999999999999999999999999999997 3331 12899999999875421 1357999999987
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccc----c
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDIC----A 312 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~----~ 312 (1106)
+++ .||+||+.++.+..+... .......++++++.+||.+. .
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKD---------------------------------NAFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCc---------------------------------HHHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 699999998754322100 00011245677888998643 3
Q ss_pred cccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhc
Q 001291 313 DTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLF 392 (1106)
Q Consensus 313 dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~ 392 (1106)
+..+ +.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.++|
T Consensus 141 ~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~ 212 (250)
T PRK14245 141 KESA-----FALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVS 212 (250)
T ss_pred hCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhC
Confidence 4444 3499999999999999999999999999999999999999999999873 24 55666888889999999
Q ss_pred CeEEEecCCeEEEEcCHHHHH
Q 001291 393 DDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~ 413 (1106)
|+|++|++|++++.|+++++.
T Consensus 213 d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 213 DKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred CEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999874
No 434
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=349.14 Aligned_cols=215 Identities=29% Similarity=0.351 Sum_probs=178.2
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i~ 69 (501)
T PRK11288 5 LSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEMR 69 (501)
T ss_pred EEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 67888887763 34699999999999999999999999999999999998653 4899999998753
Q ss_pred h----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 924 Q----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 924 ~----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
. ..+++.+||++|++.+++.+||.||+.++...+..........++.+.++++.+++.+..+..+ .+||||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 144 (501)
T PRK11288 70 FASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPL-----KYLSIG 144 (501)
T ss_pred CCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCch-----hhCCHH
Confidence 2 1234579999999988888999999988642111111123344556889999999986666553 469999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
||||++|||||+.+|+||||||||+|||+.++..+++.|++++++|+|||++|||++ ++...||++++|++ |+++..+
T Consensus 145 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~ 222 (501)
T PRK11288 145 QRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATF 222 (501)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeec
Confidence 999999999999999999999999999999999999999999878999999999997 47788999999985 6888766
Q ss_pred c
Q 001291 1080 P 1080 (1106)
Q Consensus 1080 ~ 1080 (1106)
+
T Consensus 223 ~ 223 (501)
T PRK11288 223 D 223 (501)
T ss_pred C
Confidence 4
No 435
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.1e-34 Score=356.65 Aligned_cols=209 Identities=27% Similarity=0.421 Sum_probs=169.1
Q ss_pred cceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCC
Q 001291 164 HLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGE 240 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1106)
++++|+|+|++++|||.+||+||||||||||+++|.|+++|+ +|+|.+||.++++... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 356999999999999999999999999999999999999998 9999999999887654 578999999887776
Q ss_pred CCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCcc
Q 001291 241 MTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
.||+|||.++..- .+.++..+++... ..+..+ ..|++..||.||+ .
T Consensus 417 ~TI~~NI~~g~~~-------------------------at~eei~~a~k~a------~~~d~I--~~lp~g~dt~vge-~ 462 (567)
T COG1132 417 GTIRENIALGRPD-------------------------ATDEEIEEALKLA------NAHEFI--ANLPDGYDTIVGE-R 462 (567)
T ss_pred ccHHHHHhcCCCC-------------------------CCHHHHHHHHHHh------ChHHHH--HhCcccccceecC-C
Confidence 8999999997421 0001111111100 011122 2457788999994 5
Q ss_pred CCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecC
Q 001291 321 RRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSD 400 (1106)
Q Consensus 321 ~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~ 400 (1106)
+..||||||||++||||++.+|+||+||||||+||+.+...|.+.++++. +++|+++ +.|..+.+.+ +|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-ADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-CCEEEEEEC
Confidence 56699999999999999999999999999999999999999999998654 3467776 6666655544 999999999
Q ss_pred CeEEEEcCHHHHHH
Q 001291 401 GQIVYQGPRELVLE 414 (1106)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1106)
|++++.|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999975
No 436
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.3e-34 Score=316.35 Aligned_cols=221 Identities=24% Similarity=0.295 Sum_probs=174.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++++++.++ ++.+|+||||+|++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 377888887663 2469999999999999999999999999999999999621124589999999876
Q ss_pred Chh---cccc-eEEEEccCCCCCCCCCHHHHHHHhhhhcCC----CCCChHHHHHHHHHHHHHcCCC-cccccccCCCCC
Q 001291 923 KQE---TFAR-ISGYCEQNDIHSPFVTVYESLFYSAWLRLP----PEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGV 993 (1106)
Q Consensus 923 ~~~---~~~~-~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~----~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~ 993 (1106)
... ...+ .++|++|++.+++.+|+.+++.+....... ...........+.++++.+++. ...+....
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 1222 478999999888889999998765322110 0111222345678899999996 34444421
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHh-cCeEEEEecC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1072 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~-~D~v~~l~~g 1072 (1106)
.+||||||||++|||||+.+|+||+|||||+|||+.++..+++.|+++.++|+|||++||+++. +... ||++++|+ +
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~-~ 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQ-N 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEe-C
Confidence 2499999999999999999999999999999999999999999999988779999999999873 5555 89999997 4
Q ss_pred CEEEEEecCC
Q 001291 1073 GREVYVGPLG 1082 (1106)
Q Consensus 1073 G~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 228 G~i~~~~~~~ 237 (252)
T CHL00131 228 GKIIKTGDAE 237 (252)
T ss_pred CEEEEecChh
Confidence 7999998764
No 437
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-34 Score=333.52 Aligned_cols=216 Identities=27% Similarity=0.390 Sum_probs=185.0
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCCCCCC
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQNDIHSP 942 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~~~~~ 942 (1106)
+..++|+||||++++||++||+|.||||||||+|+|+|..+ +.+|+|.++|.+... ......|+.|.|+..+.|
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~--p~~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p 96 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYP--PDSGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP 96 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCccc--CCCceEEECCEEccCCCHHHHHhCCcEEEeechhccC
Confidence 45689999999999999999999999999999999999776 458999999987642 233456899999999999
Q ss_pred CCCHHHHHHHhhhhcC-CCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001291 943 FVTVYESLFYSAWLRL-PPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1106)
Q Consensus 943 ~~tv~e~l~~~~~~~~-~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDE 1021 (1106)
++||.||+.++...+. ..-.+.+...+...++|+.+++....+.+++ +||.||||.|.|||||..+++||+|||
T Consensus 97 ~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~LsiaqrQ~VeIArAl~~~arllIlDE 171 (500)
T COG1129 97 NLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLSIAQRQMVEIARALSFDARVLILDE 171 (500)
T ss_pred CccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 9999999988866543 2345667777888999999998533555543 699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEec-CCC-chhHHHHH
Q 001291 1022 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGP-LGH-HSCHLISY 1091 (1106)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~-~~~-~~~~~~~y 1091 (1106)
|||+|+....+.+.+.+++++++|.+||+|||+++ ++++.|||+.+|.+ |+.+..++ .++ +..++++.
T Consensus 172 PTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlRD-G~~v~~~~~~~~~~~~~lv~~ 241 (500)
T COG1129 172 PTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLRD-GRVVGTRPTAAETSEDELVRL 241 (500)
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEeC-CEEeeecccccCCCHHHHHHH
Confidence 99999999999999999999999999999999998 79999999999985 78888888 354 33344444
No 438
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=348.66 Aligned_cols=207 Identities=24% Similarity=0.318 Sum_probs=173.3
Q ss_pred ceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh----hcccceEEEEccCCCCCCC
Q 001291 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ----ETFARISGYCEQNDIHSPF 943 (1106)
Q Consensus 868 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~g~v~q~~~~~~~ 943 (1106)
++++|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|++.+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35699999999999999999999999999999999998653 48999999987532 1234569999999888888
Q ss_pred CCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCC
Q 001291 944 VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1023 (1106)
Q Consensus 944 ~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPT 1023 (1106)
+||.||+.++...........+...+.++++++.+++....++.+ .+|||||||||+|||||+.+|++|||||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 999999987542111111122334456889999999987766653 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1024 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1024 sgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
+|||+.++..+++.|++++++|+|||++|||++ ++...||++++|++ |+++..|+...
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 999999999999999999888999999999987 57788999999985 79999988665
No 439
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=314.76 Aligned_cols=206 Identities=22% Similarity=0.337 Sum_probs=165.5
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++||+|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 59999999999999999999999999999999999853 5222389999999887421 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----cccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1106)
+ +||+||+.++....+.... ......++.+++.+|+.. ..+.
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK---------------------------------QVLDEAVEKSLKGASIWDEVKDRLHD 144 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhHHHHHhc
Confidence 6 8999999987543221000 001123456677888743 2344
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+.+++.++||+
T Consensus 145 ~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 216 (252)
T PRK14239 145 SAL-----GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDR 216 (252)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCE
Confidence 443 4999999999999999999999999999999999999999999998743 3 5666788888899999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|++++.|+.+++.
T Consensus 217 i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 217 TGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 440
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=316.52 Aligned_cols=206 Identities=20% Similarity=0.319 Sum_probs=165.8
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++ |+...+|+|+++|.++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 59999999999999999999999999999999999986 3212389999999987421 1235799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----cccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1106)
+. ||+||+.|.....+... ..+....++.+++.+||.+ ..++
T Consensus 106 ~~-tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~l~~ 151 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKN---------------------------------KKKLQEIVEKSLKDVALWDEVKDRLHT 151 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCC---------------------------------HHHHHHHHHHHHHHcCCchhhhhhhhC
Confidence 75 99999998654321100 0001123556788888853 2344
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.+ +.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+++.++|+..++.+++|+
T Consensus 152 ~~-----~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~ 223 (259)
T PRK14274 152 QA-----LSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EK-YTIVIVTHNMQQAARVSDQ 223 (259)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEEcCHHHHHHhCCE
Confidence 44 4599999999999999999999999999999999999999999999874 23 5566678888899999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
+++|++|+++.+|+++++.
T Consensus 224 i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 224 TAFFYMGELVECNDTNKMF 242 (259)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998874
No 441
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=299.88 Aligned_cols=168 Identities=28% Similarity=0.427 Sum_probs=147.2
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ +..+|+|+||++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 4567766553 23599999999999999999999999999999999998653 48999999987543
Q ss_pred --hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 925 --ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 925 --~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
...++.++|++|++.+++..|+.||+. ||+||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999988888889998862 7999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
|++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.||++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999987 477789999999864
No 442
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.6e-34 Score=312.87 Aligned_cols=210 Identities=22% Similarity=0.334 Sum_probs=169.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++++++|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478888887663 2469999999999999999999999999999999999765 3589999999765
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCC-cccccccCCCCCCCCCH
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELK-PLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~~LS~ 998 (1106)
.. ...++.++|++|++.+++ .|++||+.+....+.. . ..+..++++++.+++. ...+..+ .+||+
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~--~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---Q--PDPAIFLDDLERFALPDTILTKNI-----AELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---C--hHHHHHHHHHHHcCCChHHhcCCc-----ccCCH
Confidence 32 224567899999988776 5999999875433211 1 1234567899999995 3455443 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCceEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVY 1077 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~ 1077 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ .|.|||++||+++. + +.||++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHh
Confidence 999999999999999999999999999999999999999999875 48999999999873 5 57999999964444455
Q ss_pred Eec
Q 001291 1078 VGP 1080 (1106)
Q Consensus 1078 ~G~ 1080 (1106)
.|.
T Consensus 219 ~~~ 221 (225)
T PRK10247 219 EAR 221 (225)
T ss_pred hhh
Confidence 554
No 443
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.3e-35 Score=366.18 Aligned_cols=205 Identities=26% Similarity=0.383 Sum_probs=164.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+++|+|+|++++||+.++|+||||||||||+|+|+|+++|+ +|+|.+||.++.+..+ ++.++||+|++.+| +.
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLM-SG 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccC-cc
Confidence 46999999999999999999999999999999999999998 9999999999887654 57899999988766 46
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
|++|||.++.. . +. +...+++ +.++ .+..+ -.|+...||.+|+ .+
T Consensus 542 TI~eNi~~~~~-~---~~-e~i~~al---~~a~------------------------l~~~i--~~lp~G~dt~ige-~G 586 (686)
T TIGR03797 542 SIFENIAGGAP-L---TL-DEAWEAA---RMAG------------------------LAEDI--RAMPMGMHTVISE-GG 586 (686)
T ss_pred cHHHHHhcCCC-C---CH-HHHHHHH---HHcC------------------------cHHHH--HhccccccccccC-CC
Confidence 99999998632 0 00 0000100 0000 01111 1356678999996 45
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
..||||||||++||||++.+|++|+||||||+||+.+..++.+.|+++ ++|+|+ ++|.. +..+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEECC
Confidence 679999999999999999999999999999999999999999999864 355544 55554 456779999999999
Q ss_pred eEEEEcCHHHHHH
Q 001291 402 QIVYQGPRELVLE 414 (1106)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1106)
+++.+|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 444
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=323.48 Aligned_cols=232 Identities=24% Similarity=0.278 Sum_probs=180.1
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC---ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~---~~~~G~i~i~g 919 (1106)
.+.++|+++.++ ++.+|+++||+|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 478899887763 24699999999999999999999999999999999997531 13589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCC---------CCC-hHHHHHHHHHHHHHcCCCc--
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPP---------EVN-SETRKMFIEEVMELVELKP-- 982 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~---------~~~-~~~~~~~v~~~l~~~~l~~-- 982 (1106)
.++.. ...++.++|++|++.+++ .|++||+.+....+... ... .+..++.+.++++.+++.+
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 123467999999988776 59999998764321100 011 1223456788899998743
Q ss_pred --ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHH
Q 001291 983 --LRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1060 (1106)
Q Consensus 983 --~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~ 1060 (1106)
..+.. +.+||+|||||++|||||+.+|+||||||||+|||+.++..++++|+++++ +.|||++||+++ .+.
T Consensus 191 ~~~~~~~-----~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~ 263 (305)
T PRK14264 191 NDRLDDN-----ALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAA 263 (305)
T ss_pred hHHhcCc-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHH
Confidence 22322 356999999999999999999999999999999999999999999999876 589999999997 477
Q ss_pred HhcCeEE-EEecCCEEEEEecCCCc-----hhHHHHHHHhCC
Q 001291 1061 EAFDELF-LMKRGGREVYVGPLGHH-----SCHLISYFEVCP 1096 (1106)
Q Consensus 1061 ~~~D~v~-~l~~gG~~~~~G~~~~~-----~~~~~~yf~~~~ 1096 (1106)
+.||+++ +|+ .|++++.|+..+. ...+.+||.+.+
T Consensus 264 ~~~d~i~~~l~-~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~ 304 (305)
T PRK14264 264 RISDQTAVFLT-GGELVEYDDTDKIFENPESQRVEDYITGKF 304 (305)
T ss_pred HhcCEEEEEec-CCEEEEeCCHHHHHhCcccHHHHHHhcccc
Confidence 8899975 566 5799999886431 223556777654
No 445
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=318.69 Aligned_cols=202 Identities=21% Similarity=0.311 Sum_probs=163.7
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC-----CCCCceeEEEECCccCCCC-----CccceEEEEcCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHD 235 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 59999999999999999999999999999999999987 35 89999999876421 1235699999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----cc
Q 001291 236 NHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----IC 311 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~ 311 (1106)
.+++ .||+||+.+++...+... +....++.+++.+++. +.
T Consensus 104 ~l~~-~tv~enl~~~~~~~~~~~-----------------------------------~~~~~~~~~l~~~~l~~~l~~~ 147 (269)
T PRK14259 104 NPFP-KSIYENIAFGARINGYTG-----------------------------------DMDELVERSLRKAAVWDECKDK 147 (269)
T ss_pred ccch-hhHHHHHhhhhhhcCCcH-----------------------------------HHHHHHHHHHHHhCCcchhhhh
Confidence 8787 599999998764332100 0011234556777663 33
Q ss_pred ccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001291 312 ADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNL 391 (1106)
Q Consensus 312 ~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~ 391 (1106)
.++.+. .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++. .+ .+|++++|+..++.++
T Consensus 148 ~~~~~~-----~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~ 219 (269)
T PRK14259 148 LNESGY-----SLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--KN-FTIVIVTHNMQQAVRV 219 (269)
T ss_pred hCCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHh
Confidence 454444 499999999999999999999999999999999999999999999874 23 5667788899999999
Q ss_pred cCeEEEecC-----------CeEEEEcCHHHHHH
Q 001291 392 FDDIILLSD-----------GQIVYQGPRELVLE 414 (1106)
Q Consensus 392 ~D~vilL~~-----------G~iv~~G~~~~~~~ 414 (1106)
||++++|++ |++++.|+++++.+
T Consensus 220 ~d~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 220 SDMTAFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred cCEEEEEeccccccccccccceEEEeCCHHHHHh
Confidence 999999996 67899999988853
No 446
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-34 Score=317.77 Aligned_cols=219 Identities=20% Similarity=0.235 Sum_probs=172.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC--c-eeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~-~~~G~i~i~g 919 (1106)
.+.++|++++++ +.++|+|+||+|++||++||+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478899987763 24699999999999999999999999999999999996431 1 2579999999
Q ss_pred ccCC-----hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKK-----QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~-----~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.+.. ....++.+||++|++.+++ .|+.||+.+....+. .. ...++.+.++++.+++.+........ .+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQ-SGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcC-Ccc
Confidence 7652 1234567999999988776 599999987653221 11 12334566778888774311111111 134
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec---
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1071 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~--- 1071 (1106)
+||+|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 6999999999999999999999999999999999999999999999875 589999999997 58889999999972
Q ss_pred -----CCEEEEEecCC
Q 001291 1072 -----GGREVYVGPLG 1082 (1106)
Q Consensus 1072 -----gG~~~~~G~~~ 1082 (1106)
.|++++.|+..
T Consensus 229 ~~~~~~g~i~~~~~~~ 244 (264)
T PRK14243 229 EGGGRYGYLVEFDRTE 244 (264)
T ss_pred cccccCceEEEeCCHH
Confidence 47999998754
No 447
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=314.08 Aligned_cols=206 Identities=22% Similarity=0.344 Sum_probs=165.1
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 599999999999999999999999999999999998753 112389999999887531 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----cccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1106)
+ +||+||+.++....+.... .+....++.+++.+++.+ ..++
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 142 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK---------------------------------KKLDEIVEKSLKGAALWDEVKDRLKK 142 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhHHHHhc
Confidence 7 8999999987543321000 001123455677777642 3344
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.++ .||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+++|+
T Consensus 143 ~~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~ 214 (250)
T PRK14240 143 SAL-----GLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KD-YTIVIVTHNMQQASRISDK 214 (250)
T ss_pred CCC-----CCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEEeCHHHHHhhCCE
Confidence 444 499999999999999999999999999999999999999999999873 24 4566678888899999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|+++..|+.+++.
T Consensus 215 v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 215 TAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 448
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=314.37 Aligned_cols=207 Identities=20% Similarity=0.336 Sum_probs=166.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
.++|+|+|+++++|++++|+|||||||||||++|+|.++| ....+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 3599999999999999999999999999999999999874 111289999999886531 124579999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----ccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CAD 313 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 313 (1106)
++ +||+||+.++....+... .......++..++.+|+.. ..+
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~ 141 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKS---------------------------------KHKLDRIVEESLKKAALWDEVKSELN 141 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCc---------------------------------HHHHHHHHHHHHHHcCCCchhHHHHh
Confidence 77 899999998754321100 0001123456778888753 234
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
..+ +.||||||||++||+|++.+|++++|||||+|||..++..+.+.|+++.. + ++++.++|+..++.+++|
T Consensus 142 ~~~-----~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d 213 (250)
T PRK14262 142 KPG-----TRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIAD 213 (250)
T ss_pred CCh-----hhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCC
Confidence 444 45999999999999999999999999999999999999999999998742 3 566777888888999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|+++..|+++++.
T Consensus 214 ~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 214 YIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred EEEEEECCEEEEecCHHHHH
Confidence 99999999999999998874
No 449
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=317.67 Aligned_cols=213 Identities=28% Similarity=0.373 Sum_probs=171.2
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC-----CCceeEEEECCccCCCCCc---cceEEEEcCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS-----LKVSGRVTYNGHNMDEFVP---ERTAAYISQHDN 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~ 236 (1106)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 36999999999999999999999999999999999999874 1237999999988754322 346899999977
Q ss_pred CCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccc
Q 001291 237 HIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
.++.+||+||+.++...... ... .. ..+....++.+++.+||+...++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~~---~~-------------------------~~~~~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RAG---AL-------------------------THRDGEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccc--ccc---cC-------------------------CHHHHHHHHHHHHHcCcHhhhcCCc
Confidence 66779999999885321000 000 00 0011234667899999988777776
Q ss_pred cCccCCCCChhhhhHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhH
Q 001291 317 GDEMRRGVSGGQKKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPE 387 (1106)
Q Consensus 317 g~~~~rgLSGGqkqRvsia~al~---------~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~ 387 (1106)
+. |||||||||+||++|+ .+|++|+|||||+|||+.++..+.+.|+++.... +++|++++|+..+
T Consensus 144 ~~-----LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tviiisH~~~~ 217 (272)
T PRK13547 144 TT-----LSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDW-NLGVLAIVHDPNL 217 (272)
T ss_pred cc-----CCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHH
Confidence 55 9999999999999999 5999999999999999999999999999876432 4556667888889
Q ss_pred HHhhcCeEEEecCCeEEEEcCHHHHH
Q 001291 388 TYNLFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 388 ~~~~~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
+.++||++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 99999999999999999999988763
No 450
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=314.50 Aligned_cols=220 Identities=21% Similarity=0.265 Sum_probs=174.4
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCC--C-ceeEEEEEEcC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGDIRISG 919 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~--~-~~~~G~i~i~g 919 (1106)
.+.++||++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 3 ~l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (250)
T PRK14266 3 RIEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDG 69 (250)
T ss_pred EEEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECC
Confidence 367788877653 2469999999999999999999999999999999999643 1 12589999999
Q ss_pred ccCCh-----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCC
Q 001291 920 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVN 994 (1106)
Q Consensus 920 ~~~~~-----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~ 994 (1106)
.+... ...++.++|++|++.+++ .|+.||+.+...... ....+..++.+.++++.+++.+........ ...
T Consensus 70 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14266 70 VDIYDPAVDVVELRKKVGMVFQKPNPFP-KSIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SAL 145 (250)
T ss_pred EEcccccccHHHHhhheEEEecCCccCc-chHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Ccc
Confidence 87532 234567999999988777 499999987643221 112233456678889999885422111111 234
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
.||+|||||++|||||+.+|+||+|||||+|||+.++..+.++|+++++ |+|||++||+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~ 222 (250)
T PRK14266 146 GLSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-Ce
Confidence 6999999999999999999999999999999999999999999999864 899999999997 58888999999975 78
Q ss_pred EEEEecCC
Q 001291 1075 EVYVGPLG 1082 (1106)
Q Consensus 1075 ~~~~G~~~ 1082 (1106)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (250)
T PRK14266 223 IIESGLTD 230 (250)
T ss_pred EEEeCCHH
Confidence 99998754
No 451
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-34 Score=308.26 Aligned_cols=192 Identities=27% Similarity=0.400 Sum_probs=162.4
Q ss_pred ceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC-------ccceEEEEcCCCCCCCCCC
Q 001291 170 DVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV-------PERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1106)
|+|+++++ ++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999998 999999998764211 1357999999998888999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
++||+.+...... . ......++.+++.+||++..++.+++
T Consensus 92 ~~~~l~~~~~~~~------------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (214)
T cd03297 92 VRENLAFGLKRKR------------N------------------------REDRISVDELLDLLGLDHLLNRYPAQ---- 131 (214)
T ss_pred HHHHHHHHHhhCC------------H------------------------HHHHHHHHHHHHHcCCHhHhhcCccc----
Confidence 9999988642110 0 00112356788999998877777655
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|++++... +++|++++|+..++.+++|++++|++|+
T Consensus 132 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 132 -LSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999876532 4566778888999999999999999999
Q ss_pred EEEEc
Q 001291 403 IVYQG 407 (1106)
Q Consensus 403 iv~~G 407 (1106)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98775
No 452
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-34 Score=314.96 Aligned_cols=217 Identities=21% Similarity=0.218 Sum_probs=173.9
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCc---eeEEEEEEc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGDIRIS 918 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~---~~~G~i~i~ 918 (1106)
..+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3578899987764 246999999999999999999999999999999999975421 258999999
Q ss_pred CccCC-------hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccc
Q 001291 919 GYPKK-------QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSL 987 (1106)
Q Consensus 919 g~~~~-------~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~ 987 (1106)
|.+.. ...+++.++|++|++.+++. |++||+.++...... ......++.+.++++.+++.+ ..+..
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~ 158 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGV--KRRSILEERVENALRNAALWDEVKDRLGDL 158 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCC--ChHHHHHHHHHHHHHHcCCchhhhHHHhCC
Confidence 87542 12345679999999888875 999999876432210 111222345778888887742 22332
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEE
Q 001291 988 VGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF 1067 (1106)
Q Consensus 988 ~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~ 1067 (1106)
...||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.||+++
T Consensus 159 -----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~ 231 (265)
T PRK14252 159 -----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTA 231 (265)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEE
Confidence 346999999999999999999999999999999999999999999999865 699999999997 4778999999
Q ss_pred EEecCCEEEEEecCC
Q 001291 1068 LMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1068 ~l~~gG~~~~~G~~~ 1082 (1106)
+|++ |++++.|+..
T Consensus 232 ~l~~-G~i~~~g~~~ 245 (265)
T PRK14252 232 YMYM-GELIEFGATD 245 (265)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9974 7899988764
No 453
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.7e-34 Score=309.18 Aligned_cols=210 Identities=19% Similarity=0.291 Sum_probs=154.3
Q ss_pred CceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCc
Q 001291 841 PYSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGY 920 (1106)
Q Consensus 841 ~~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~ 920 (1106)
|-.+-++||+|.|+ +.++++++++|-|.--..+|||||||.||||||++|.|...+ ..|+.+-+
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn-- 647 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN-- 647 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc--
Confidence 33577888888775 356799999999999999999999999999999999997764 35554321
Q ss_pred cCChhcccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCH
Q 001291 921 PKKQETFARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLST 998 (1106)
Q Consensus 921 ~~~~~~~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~ 998 (1106)
.+-.+|+..|... +...-|..|.|.-. ++ .+. +.+...|-.+||...++..- +..|||
T Consensus 648 ------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~----FN--lpy----q~ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 648 ------HRLRIGWFDQHANEALNGEETPVEYLQRK----FN--LPY----QEARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred ------ceeeeechhhhhHHhhccccCHHHHHHHh----cC--CCh----HHHHHHhhhhhhhhccceEe----eeecCC
Confidence 1224788877543 23345677766321 11 112 22456788899988777653 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEE
Q 001291 999 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYV 1078 (1106)
Q Consensus 999 Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~ 1078 (1106)
||+-||++|-.-+..|+||||||||++||.++...+-++|++. ...||++|||-.+ +.+.-..++++.+.|----.
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eId 783 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEID 783 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcc
Confidence 9999999999999999999999999999999999999999887 4579999999764 54554567777765543345
Q ss_pred ecCCCchhHHHH
Q 001291 1079 GPLGHHSCHLIS 1090 (1106)
Q Consensus 1079 G~~~~~~~~~~~ 1090 (1106)
|++.....++++
T Consensus 784 GdFeDYkkEVLd 795 (807)
T KOG0066|consen 784 GDFEDYKKEVLD 795 (807)
T ss_pred ccHHHHHHHHHH
Confidence 655544444433
No 454
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-35 Score=285.92 Aligned_cols=207 Identities=23% Similarity=0.336 Sum_probs=175.0
Q ss_pred CCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC---------------h-hcccc
Q 001291 866 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK---------------Q-ETFAR 929 (1106)
Q Consensus 866 ~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~---------------~-~~~~~ 929 (1106)
++...+|++||++.+.|+.+.|+|.|||||||+|+||.=..+ +..|.|.++|..+. + ...+.
T Consensus 16 ~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~Rs 93 (256)
T COG4598 16 YGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLRT 93 (256)
T ss_pred cccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHHH
Confidence 456789999999999999999999999999999999987655 35899999996531 0 12334
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHH
Q 001291 930 ISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVE 1009 (1106)
Q Consensus 930 ~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~a 1009 (1106)
..|+|+|+..++..+||.||+.-.- .+. ...++.+..++++..|..+|+.+..+... ..|||||+||++||||
T Consensus 94 ~L~mVFQ~FNLWsHmtvLeNViEaP-vhV-Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----~~LSGGQQQR~aIARa 166 (256)
T COG4598 94 RLGMVFQHFNLWSHMTVLENVIEAP-VHV-LGVSKAEAIERAEKYLAKVGIAEKADAYP-----AHLSGGQQQRVAIARA 166 (256)
T ss_pred HhhHhhhhcchhHHHHHHHHHHhcc-hHh-hcCCHHHHHHHHHHHHHHhCchhhhhcCc-----cccCchHHHHHHHHHH
Confidence 5799999999999999999986432 211 23456667778889999999998888663 3699999999999999
Q ss_pred HhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCC
Q 001291 1010 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGH 1083 (1106)
Q Consensus 1010 L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~ 1083 (1106)
|+.+|+++++|||||+|||+---.+.+.+++++++|+|++++||.+.+ ..+...++++|++ |.+-+.|++..
T Consensus 167 LameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~q 238 (256)
T COG4598 167 LAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPEQ 238 (256)
T ss_pred HhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChHH
Confidence 999999999999999999999999999999999999999999999875 5567889999986 78999998763
No 455
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.6e-34 Score=312.25 Aligned_cols=209 Identities=27% Similarity=0.405 Sum_probs=165.8
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++. .++.+|+|+||+|++|++++|+||||||||||+++|+|..++ ..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEhH
Confidence 567777765531 124599999999999999999999999999999999998653 4799999998653
Q ss_pred h---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccC------CCCCC
Q 001291 924 Q---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVG------LPGVN 994 (1106)
Q Consensus 924 ~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~------~~g~~ 994 (1106)
. ...++.++|++|++..++ .|+.||+.+... .. . ...+.++++.+++.+..+..+. .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~-~---~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LA-D---DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CC-C---HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 223457999999987776 699999876421 11 1 2235678888888766554321 01134
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCE
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGR 1074 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~ 1074 (1106)
+||||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ +|||++||+++. . +.||++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~-~-~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL-L-DLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH-H-HhCCEEEEEeC-Ce
Confidence 79999999999999999999999999999999999999999999998764 899999999863 4 79999999985 67
Q ss_pred EEEEe
Q 001291 1075 EVYVG 1079 (1106)
Q Consensus 1075 ~~~~G 1079 (1106)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 77653
No 456
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=5.2e-34 Score=314.87 Aligned_cols=215 Identities=27% Similarity=0.290 Sum_probs=171.1
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc--
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP-- 921 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~-- 921 (1106)
+.++|+++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|..++ .+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEeccccc
Confidence 67788887653 23589999999999999999999999999999999998663 58999999876
Q ss_pred ---CCh---hc----ccceEEEEccCCC--CCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc-cccccc
Q 001291 922 ---KKQ---ET----FARISGYCEQNDI--HSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP-LRQSLV 988 (1106)
Q Consensus 922 ---~~~---~~----~~~~~g~v~q~~~--~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~ 988 (1106)
... .. .++.++|++|++. ..+..|+.||+.+..... .. ......+..+.++++.+++.+ ..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-
Confidence 321 11 1346899999875 334578899986542211 10 111233456789999999963 55554
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEE
Q 001291 989 GLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1067 (1106)
Q Consensus 989 ~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~ 1067 (1106)
+..||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.||+++
T Consensus 146 ----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 146 ----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 3469999999999999999999999999999999999999999999998654 899999999987 4777899999
Q ss_pred EEecCCEEEEEecCC
Q 001291 1068 LMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1068 ~l~~gG~~~~~G~~~ 1082 (1106)
+|++ |++++.|+..
T Consensus 221 ~l~~-G~i~~~~~~~ 234 (253)
T TIGR02323 221 VMQQ-GRVVESGLTD 234 (253)
T ss_pred EEEC-CEEEEECCHH
Confidence 9985 7899988753
No 457
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.4e-34 Score=313.95 Aligned_cols=198 Identities=26% Similarity=0.371 Sum_probs=167.3
Q ss_pred EeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCHH
Q 001291 871 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVTVY 947 (1106)
Q Consensus 871 ~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~g~v~q~~~~~~~~tv~ 947 (1106)
+|+|+||+|++|++++|+|+||||||||+++|+|..+ .+|+|.++|.+... ...++.++|++|++...+.+|+.
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999764 27999999987532 22345689999998777789999
Q ss_pred HHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhc-------CCCeEEEe
Q 001291 948 ESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVA-------NPSIIFMD 1020 (1106)
Q Consensus 948 e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~-------~p~illLD 1020 (1106)
||+.+..... ...+...+.++++++.+++.+..+..+ ..||+|||||++|||||+. +|++||||
T Consensus 88 ~nl~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPDK----TRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCccC----CCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 9998753211 122233456789999999987666653 4699999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1021 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1021 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
|||+|||+.++..+++.|+++.++|.|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999987 47789999999985 7899988764
No 458
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2e-34 Score=304.11 Aligned_cols=179 Identities=26% Similarity=0.331 Sum_probs=149.8
Q ss_pred ceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh-----hcccceEEEEccCCC-CC
Q 001291 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ-----ETFARISGYCEQNDI-HS 941 (1106)
Q Consensus 868 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~g~v~q~~~-~~ 941 (1106)
++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 34699999999999999999999999999999999998663 58999999987531 123557999999973 23
Q ss_pred CCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001291 942 PFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1021 (1106)
Q Consensus 942 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDE 1021 (1106)
...|++||+.+..... ....+...+.++++++.+++.+..+..+ .+||+|||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998864322 1223344456789999999987777654 4699999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCcc
Q 001291 1022 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1056 (1106)
Q Consensus 1022 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~ 1056 (1106)
||+|||+.++..+.+.|+++.++|+|||++||+++
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999975
No 459
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1e-34 Score=358.71 Aligned_cols=211 Identities=23% Similarity=0.362 Sum_probs=177.6
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++|+|++|.|+. ++++|+|+||+|++||++||+|+||||||||+++|+|..++ .+|.|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 36899999998852 23599999999999999999999999999999999998764 47999999988
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccccc-------ccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQS-------LVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~~~~ 991 (1106)
+++ ..+++.++||+|++.+++ -|++||+.++. +. .++.++++++.+++.+..+. .++..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~-~Ti~~NI~~~~------~~----~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLA-DTFLANVTLGR------DI----SEEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCcccc-chHHHHHHhCC------CC----CHHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 753 456788999999999887 49999998762 11 13347888888887754433 33333
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
| .+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++.+ ++|+|++||+++ ....||+|++|+
T Consensus 474 g-~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~- 548 (592)
T PRK10790 474 G-NNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLH- 548 (592)
T ss_pred C-CCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEE-
Confidence 3 46999999999999999999999999999999999999999999998864 699999999985 467799999997
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
+|+++..|+..
T Consensus 549 ~G~i~~~G~~~ 559 (592)
T PRK10790 549 RGQAVEQGTHQ 559 (592)
T ss_pred CCEEEEEcCHH
Confidence 57999999864
No 460
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=313.56 Aligned_cols=204 Identities=20% Similarity=0.276 Sum_probs=164.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC-----CCCCceeEEEECCccCCCC-----CccceEEEEcCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQH 234 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~ 234 (1106)
..+|+|+|+++++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++... ..++.++|++|+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 110 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQK 110 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecC
Confidence 359999999999999999999999999999999999864 45 89999999887532 124579999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----c
Q 001291 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----I 310 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~ 310 (1106)
+.+++. ||+||+.++....+... . ......+...++.+++. +
T Consensus 111 ~~~~~~-tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~ 156 (268)
T PRK14248 111 PNPFPK-SIYNNITHALKYAGERR--K-------------------------------SVLDEIVEESLTKAALWDEVKD 156 (268)
T ss_pred CccCcc-cHHHHHHHHHHhcCCCc--H-------------------------------HHHHHHHHHHHHHcCCCcchHH
Confidence 887774 99999998643221000 0 00112244567777774 2
Q ss_pred cccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHh
Q 001291 311 CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYN 390 (1106)
Q Consensus 311 ~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 390 (1106)
..++.++ .||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+
T Consensus 157 ~~~~~~~-----~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~ 228 (268)
T PRK14248 157 RLHSSAL-----SLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALR 228 (268)
T ss_pred HHhcCcc-----cCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHH
Confidence 3345544 4999999999999999999999999999999999999999999998743 3 566777888889999
Q ss_pred hcCeEEEecCCeEEEEcCHHHHH
Q 001291 391 LFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 391 ~~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
+||+|++|++|++++.|+.+++.
T Consensus 229 ~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 229 VSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999988764
No 461
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.7e-34 Score=355.03 Aligned_cols=199 Identities=23% Similarity=0.289 Sum_probs=165.0
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999998 9999999999876544 5789999999877764 9
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcC-------Cccccccc
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLG-------LDICADTM 315 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-------L~~~~dt~ 315 (1106)
++|||.++.. . + .+ .++.+++..| |++..||.
T Consensus 431 i~~NI~~~~~---~-~-d~------------------------------------~i~~a~~~~gl~~~i~~lp~Gldt~ 469 (592)
T PRK10790 431 FLANVTLGRD---I-S-EE------------------------------------QVWQALETVQLAELARSLPDGLYTP 469 (592)
T ss_pred HHHHHHhCCC---C-C-HH------------------------------------HHHHHHHHcCcHHHHHhcccccccc
Confidence 9999998631 1 0 00 1122222222 55667899
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+|+ .+..||||||||++|||||+.+|+|++||||||+||+.+...|.+.|+++. .++|+|++. |.. +....||+|
T Consensus 470 i~e-~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIivt-Hr~-~~l~~~D~i 544 (592)
T PRK10790 470 LGE-QGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVIA-HRL-STIVEADTI 544 (592)
T ss_pred ccC-CCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEEe-cch-HHHHhCCEE
Confidence 987 455699999999999999999999999999999999999999999998763 345666554 443 556779999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|+++..|+++++.+
T Consensus 545 i~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 545 LVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred EEEECCEEEEEcCHHHHHh
Confidence 9999999999999999864
No 462
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=358.24 Aligned_cols=214 Identities=23% Similarity=0.322 Sum_probs=177.4
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++++||+|.|+. +++++|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 36999999998852 234699999999999999999999999999999999998764 58999999988
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccc-------ccccCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLR-------QSLVGLP 991 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~~~~ 991 (1106)
.++ ..+++.++|++|++.+++ -|++||+.++. +.+. .++.++++++.+++.+.. |..++..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~----~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQY----SREQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCC----CHHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 456778999999998876 69999998752 1111 234567788888766533 3344443
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
| .+||||||||++|||||+++|+||+||||||+||++++..+++.|+++. +++|+|+|||+++ ..+.||+|++|++
T Consensus 478 g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 G-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred C-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 3 5699999999999999999999999999999999999999999999875 4799999999985 4678999999985
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 554 -g~i~e~g~~~ 563 (582)
T PRK11176 554 -GEIVERGTHA 563 (582)
T ss_pred -CEEEEeCCHH
Confidence 7999998753
No 463
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-34 Score=299.76 Aligned_cols=170 Identities=29% Similarity=0.418 Sum_probs=147.7
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ 924 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~ 924 (1106)
.++|+++.++ ++++++|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEP--DSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 4667766553 24699999999999999999999999999999999998653 58999999987532
Q ss_pred -----hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHH
Q 001291 925 -----ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTE 999 (1106)
Q Consensus 925 -----~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~G 999 (1106)
...++.++|++|++..++..|++||+.+. ||+|
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999998888788999987431 8999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 1000 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 1000 qrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
||||++|||||+.+|++++|||||+|||+.++..+++.|++++++ |+|+|++||+++ ++.+.||++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877 899999999987 466789999999864
No 464
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=315.99 Aligned_cols=195 Identities=27% Similarity=0.334 Sum_probs=155.3
Q ss_pred EEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCCH
Q 001291 870 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVTV 946 (1106)
Q Consensus 870 ~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~g~v~q~~~~~~~~tv 946 (1106)
.+++|+||++++|++++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 589999999999999999999999999999999998653 58999999976532 234567999999987775 699
Q ss_pred HHHHHHhhhhcCCCCCChHHHH-----HHHHHHHHHc--CCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001291 947 YESLFYSAWLRLPPEVNSETRK-----MFIEEVMELV--ELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1106)
Q Consensus 947 ~e~l~~~~~~~~~~~~~~~~~~-----~~v~~~l~~~--~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illL 1019 (1106)
+||+.+.... ....... ..+++.++.+ ++....+.. +..||+|||||++|||||+.+|++|+|
T Consensus 93 ~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999775321 1111111 1233444444 444443333 356999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1020 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
||||+|||+.++..+.+.|+++. +|+|||++||+++ ++ +.||++++|++ |++++.|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-CeEeeeCCH
Confidence 99999999999999999999986 4899999999997 35 45999999986 688888764
No 465
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-34 Score=312.32 Aligned_cols=207 Identities=21% Similarity=0.327 Sum_probs=165.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14251 17 YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTP 96 (251)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCcc
Confidence 359999999999999999999999999999999999986 2111389999999886431 124579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----cccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1106)
++ .||+||+.++....+.... +.....++.+++.++|. ...+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14251 97 FP-FSVYDNVAYGLKIAGVKDK---------------------------------ELIDQRVEESLKQAAIWKETKDNLD 142 (251)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchHHHhc
Confidence 75 7999999886543221000 00112345677888884 2334
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
..+ ..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+++|
T Consensus 143 ~~~-----~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d 214 (251)
T PRK14251 143 RNA-----QAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK--HQ-YTFIMVTHNLQQAGRISD 214 (251)
T ss_pred cCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH--cC-CeEEEEECCHHHHHhhcC
Confidence 444 4599999999999999999999999999999999999999999999874 23 567778888899999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|+++..|+.+++.
T Consensus 215 ~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 215 QTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 466
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=8.7e-33 Score=345.22 Aligned_cols=104 Identities=25% Similarity=0.328 Sum_probs=89.5
Q ss_pred HHHHHHHcCCCcc-cccccCCCCCCCCCHHHHHHHHHHHHHhc---CCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCc
Q 001291 971 IEEVMELVELKPL-RQSLVGLPGVNGLSTEQRKRLTIAVELVA---NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR 1046 (1106)
Q Consensus 971 v~~~l~~~~l~~~-~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~---~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~ 1046 (1106)
..++|+.++|... .++. ..+|||||+||+.||++|+. +|++++|||||+|||+.....+++.|+++.++|.
T Consensus 808 ~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~ 882 (924)
T TIGR00630 808 KLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGN 882 (924)
T ss_pred HHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 3467888888653 3443 34699999999999999997 5999999999999999999999999999988899
Q ss_pred eEEEEecCccHHHHHhcCeEEEEe-----cCCEEEEEecC
Q 001291 1047 TVVCTIHQPSIDIFEAFDELFLMK-----RGGREVYVGPL 1081 (1106)
Q Consensus 1047 tvi~~tH~~~~~~~~~~D~v~~l~-----~gG~~~~~G~~ 1081 (1106)
|||+++|+++ ....||+++.|. +||++++.|+.
T Consensus 883 TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 883 TVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 9999999986 346799999994 57999999875
No 467
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.6e-35 Score=331.17 Aligned_cols=213 Identities=23% Similarity=0.353 Sum_probs=179.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.++++||+|+|+.+ ..++|+|+||++++||.+||+|+||||||||+.+|+|-.. +.+|+|.++|.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999998753 3469999999999999999999999999999999999665 3589999999886
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccc-------cCCCC
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSL-------VGLPG 992 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~-------~~~~g 992 (1106)
.. ..+++.++++.|...++ .-|+++|+.+.. ++ ..++.+++++++++|.++.... ++. |
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~-----~~----AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN-----PD----ASDEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC-----CC----CCHHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 33566789999977655 469999997652 12 2345678999999998765544 333 3
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
...||||||||++|||+|++|.++++|||||.|||+.+.+.|++.|.+.++ |+|+|++||++. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999988764 899999999986 3689999999985
Q ss_pred CEEEEEecCCC
Q 001291 1073 GREVYVGPLGH 1083 (1106)
Q Consensus 1073 G~~~~~G~~~~ 1083 (1106)
|++++.|..++
T Consensus 548 Gkiie~G~~~~ 558 (573)
T COG4987 548 GKIIEEGTHAE 558 (573)
T ss_pred CeeeecCCHHh
Confidence 79999998764
No 468
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=5.3e-34 Score=313.16 Aligned_cols=209 Identities=24% Similarity=0.328 Sum_probs=170.6
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++ ++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~~~-- 66 (251)
T PRK09544 4 LVSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAP--DEGVIKRNGK-- 66 (251)
T ss_pred EEEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCc--
Confidence 367888887763 24699999999999999999999999999999999998653 5799999862
Q ss_pred ChhcccceEEEEccCCCCCCC--CCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHH
Q 001291 923 KQETFARISGYCEQNDIHSPF--VTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQ 1000 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~--~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gq 1000 (1106)
..++|++|++.+.+. .|+.+++.+. ... .++.+.++++.+++.+..+..+ ..||+||
T Consensus 67 ------~~i~~v~q~~~~~~~l~~~~~~~~~~~------~~~----~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq 125 (251)
T PRK09544 67 ------LRIGYVPQKLYLDTTLPLTVNRFLRLR------PGT----KKEDILPALKRVQAGHLIDAPM-----QKLSGGE 125 (251)
T ss_pred ------cCEEEeccccccccccChhHHHHHhcc------ccc----cHHHHHHHHHHcCChHHHhCCh-----hhCCHHH
Confidence 358999999876655 4777776432 111 1234678999999988776653 4699999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CceEEEEecCccHHHHHhcCeEEEEecCCEEEEEe
Q 001291 1001 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVG 1079 (1106)
Q Consensus 1001 rqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G 1079 (1106)
|||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|+ + ++++.|
T Consensus 126 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g 202 (251)
T PRK09544 126 TQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSG 202 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeC
Confidence 99999999999999999999999999999999999999998765 899999999997 5778899999995 4 588888
Q ss_pred cCCCc--hhHHHHHH
Q 001291 1080 PLGHH--SCHLISYF 1092 (1106)
Q Consensus 1080 ~~~~~--~~~~~~yf 1092 (1106)
+..+. ...+.++|
T Consensus 203 ~~~~~~~~~~~~~~~ 217 (251)
T PRK09544 203 TPEVVSLHPEFISMF 217 (251)
T ss_pred CHHHHhCCHHHHHHh
Confidence 76532 23456666
No 469
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.6e-34 Score=306.13 Aligned_cols=197 Identities=28% Similarity=0.376 Sum_probs=162.4
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|++..++ +..+|+|+||+|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPP--AAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeCc
Confidence 56777776553 34699999999999999999999999999999999997653 5799999997653
Q ss_pred hhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHH
Q 001291 924 QETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKR 1003 (1106)
Q Consensus 924 ~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqr 1003 (1106)
....++.++|++|++..++..|+.||+.+....+. . ..+.+.++++.+++.+..+... .+||+|||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---G----EELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22245678999998888888999999977543221 1 1234788999999987665543 4699999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 1004 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 1004 l~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++. . |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 99999999999999999999999999999999999998778999999999986 343 3 8888774
No 470
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=311.58 Aligned_cols=206 Identities=18% Similarity=0.254 Sum_probs=169.5
Q ss_pred CceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCChhcccceEEEEccCCCCCCCCCH
Q 001291 867 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQETFARISGYCEQNDIHSPFVTV 946 (1106)
Q Consensus 867 ~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~~~~~~~~g~v~q~~~~~~~~tv 946 (1106)
..+++|+++||+|++|+++||+||||||||||+++|+|..++ ..|+|.++|. +++++|.....+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCE----------EeEEecccCCCCCCcH
Confidence 456799999999999999999999999999999999998663 4799999884 3566777666677899
Q ss_pred HHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001291 947 YESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1026 (1106)
Q Consensus 947 ~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgL 1026 (1106)
.||+.+..... ....+.....++++++.+++.+..+..+ .+||+|||||++||+||+.+|+||||||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPV-----KKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCc-----ccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998754332 1223444455678888889887766553 469999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCCCchhHHHHHHHh
Q 001291 1027 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLGHHSCHLISYFEV 1094 (1106)
Q Consensus 1027 D~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~~~~~~~~~yf~~ 1094 (1106)
|+.++..+++.|.++.+.|+|||++||+++ ++.+.||++++|++ |++++.|+..+......+||..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~~~~~~~~~~~~~ 240 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELDDVLPKYEAFLND 240 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHHHHHHHhHHHHHH
Confidence 999999999999998777999999999987 47788999999974 7899988866544445555543
No 471
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=311.94 Aligned_cols=217 Identities=23% Similarity=0.295 Sum_probs=173.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCC--c--eeEEEEEEc
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G--YITGDIRIS 918 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~--~--~~~G~i~i~ 918 (1106)
.+.+++++++++ ++.+|+|+||+|.+||+++|+|+||||||||+++|+|...+ | .+.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 377888887653 35699999999999999999999999999999999997542 1 123566666
Q ss_pred CccCCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCc----ccccccCCC
Q 001291 919 GYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKP----LRQSLVGLP 991 (1106)
Q Consensus 919 g~~~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~~~~ 991 (1106)
|.+... ...++.++|++|++.+++.+|+.||+.+...... ....+..+..+.++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 665422 2345679999999988888999999987643211 1122334456789999999864 22332
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEec
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1071 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~ 1071 (1106)
+..||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.||++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 346999999999999999999999999999999999999999999999864 699999999987 46788999999984
Q ss_pred CCEEEEEecCC
Q 001291 1072 GGREVYVGPLG 1082 (1106)
Q Consensus 1072 gG~~~~~G~~~ 1082 (1106)
|+++..|+..
T Consensus 228 -g~i~~~g~~~ 237 (257)
T PRK14246 228 -GELVEWGSSN 237 (257)
T ss_pred -CEEEEECCHH
Confidence 7999998765
No 472
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-34 Score=355.47 Aligned_cols=213 Identities=26% Similarity=0.394 Sum_probs=178.1
Q ss_pred ceeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCcc
Q 001291 842 YSLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYP 921 (1106)
Q Consensus 842 ~~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~ 921 (1106)
..++|+||+|.|+. +++++|+|+||+++||+++||+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 36999999998852 123699999999999999999999999999999999998764 58999999988
Q ss_pred CCh---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccccc------ccCCCC
Q 001291 922 KKQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQS------LVGLPG 992 (1106)
Q Consensus 922 ~~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~------~~~~~g 992 (1106)
.++ ..+++.++||+|++.+++ .|++||+.++.. + ..++.++++++.+++.+..+. .++..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~~-----~----~~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAAP-----N----ASDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCCC-----c----cCHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 456778999999998775 699999987531 1 123457889999998876443 33332
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
...||||||||++|||||+++|+||+||||||+||+++++.+++.|+++. +++|+|++||+++. ...||++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~~--~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLTG--LEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChhH--HHhCCEEEEEeC-
Confidence 34699999999999999999999999999999999999999999999885 58999999999973 467999999985
Q ss_pred CEEEEEecCC
Q 001291 1073 GREVYVGPLG 1082 (1106)
Q Consensus 1073 G~~~~~G~~~ 1082 (1106)
|++++.|+..
T Consensus 549 G~i~~~g~~~ 558 (574)
T PRK11160 549 GQIIEQGTHQ 558 (574)
T ss_pred CeEEEeCCHH
Confidence 7999998754
No 473
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2e-34 Score=322.76 Aligned_cols=213 Identities=29% Similarity=0.445 Sum_probs=173.9
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCcc---ceEEEEcCCCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPE---RTAAYISQHDNHIG 239 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~ 239 (1106)
.++++|+|+||.+.+|+-++|+||||||||||.++|.|..+|. +|.|.+||.+++.+++. +.+||.||+-.+|
T Consensus 347 ~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF- 422 (580)
T COG4618 347 QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELF- 422 (580)
T ss_pred CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceec-
Confidence 3468999999999999999999999999999999999999997 99999999999887653 7899999975555
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
..||.|||+= +. ++.|.+...+++...+ +.+ =++.|++.+||.||+
T Consensus 423 ~GTIaeNIaR---f~----------------------~~~d~~kIieAA~lAg------vHe--lIl~lP~GYdT~iG~- 468 (580)
T COG4618 423 DGTIAENIAR---FG----------------------EEADPEKVIEAARLAG------VHE--LILRLPQGYDTRIGE- 468 (580)
T ss_pred CCcHHHHHHh---cc----------------------ccCCHHHHHHHHHHcC------hHH--HHHhCcCCccCccCC-
Confidence 5799999952 21 1223333333332222 111 146799999999996
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
.+.+||||||||+++|||++++|.+++||||-|+||+.....+.+.|.+.. ..++|+|++ +| .+.+...+|+|++|+
T Consensus 469 ~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~vvvi-aH-RPs~L~~~Dkilvl~ 545 (580)
T COG4618 469 GGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTVVVI-AH-RPSALASVDKILVLQ 545 (580)
T ss_pred CCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEEEEE-ec-CHHHHhhcceeeeec
Confidence 456799999999999999999999999999999999999999999998753 345555554 44 467889999999999
Q ss_pred CCeEEEEcCHHHHHHHH
Q 001291 400 DGQIVYQGPRELVLEFF 416 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~~f 416 (1106)
+|++-.+|+++|++...
T Consensus 546 ~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 546 DGRIAAFGPREEVLAKV 562 (580)
T ss_pred CChHHhcCCHHHHHHHh
Confidence 99999999999998754
No 474
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.2e-34 Score=278.30 Aligned_cols=201 Identities=28% Similarity=0.391 Sum_probs=172.5
Q ss_pred ccccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc-------cceEEEEcC
Q 001291 161 TKKHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP-------ERTAAYISQ 233 (1106)
Q Consensus 161 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q 233 (1106)
.....+||++|++.|++||-++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++..... .+.+|+|+|
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQ 95 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQ 95 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEE
Confidence 346688999999999999999999999999999999999999998 9999999999865532 368999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccc
Q 001291 234 HDNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICAD 313 (1106)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
...++|+||..||+...+.++|-+.+ | ........|+.+||.+-.+
T Consensus 96 SF~Lip~ltAlENV~lPleL~ge~~~--------------------~--------------~~~~A~~lL~~vGLg~Rl~ 141 (228)
T COG4181 96 SFHLIPNLTALENVALPLELRGESSA--------------------D--------------SRAGAKALLEAVGLGKRLT 141 (228)
T ss_pred eeeccccchhhhhccchhhhcCCccc--------------------c--------------HHHHHHHHHHHhCcccccc
Confidence 99999999999999998877653211 0 1123456789999998888
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
.+.+. |||||+|||+||||+...|+|||-||||-.||..|..+|.++|-.+.+. .+++++.++|+. ....-||
T Consensus 142 HyP~q-----LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre-~G~TlVlVTHD~-~LA~Rc~ 214 (228)
T COG4181 142 HYPAQ-----LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRE-RGTTLVLVTHDP-QLAARCD 214 (228)
T ss_pred cCccc-----cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhh-cCceEEEEeCCH-HHHHhhh
Confidence 77765 9999999999999999999999999999999999999999999887664 566777777764 5667899
Q ss_pred eEEEecCCeEEE
Q 001291 394 DIILLSDGQIVY 405 (1106)
Q Consensus 394 ~vilL~~G~iv~ 405 (1106)
|++-|.+|+++.
T Consensus 215 R~~r~~~G~l~~ 226 (228)
T COG4181 215 RQLRLRSGRLVE 226 (228)
T ss_pred heeeeecceecc
Confidence 999999999874
No 475
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=1.5e-34 Score=316.15 Aligned_cols=197 Identities=28% Similarity=0.383 Sum_probs=153.6
Q ss_pred eEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh---hcccceEEEEccCCCCCCCCC
Q 001291 869 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ---ETFARISGYCEQNDIHSPFVT 945 (1106)
Q Consensus 869 ~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~g~v~q~~~~~~~~t 945 (1106)
.++|+|+||+|++|++++|+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDP--TSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCC--CCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 4699999999999999999999999999999999998653 58999999977532 223456999999987765 69
Q ss_pred HHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccccccc------CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001291 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLV------GLPGVNGLSTEQRKRLTIAVELVANPSIIFM 1019 (1106)
Q Consensus 946 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~------~~~g~~~LS~Gqrqrl~iA~aL~~~p~illL 1019 (1106)
++||+.+....+ ..+ .+.+.++..++.+..+... ....+.+||+|||||++|||||+.+|++|+|
T Consensus 93 v~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~llll 163 (238)
T cd03249 93 IAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKILLL 163 (238)
T ss_pred HHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999997753211 111 1223333333322211110 0012357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecC
Q 001291 1020 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPL 1081 (1106)
Q Consensus 1020 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~ 1081 (1106)
||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|++ |++++.|+.
T Consensus 164 DEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 164 DEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999987 7999999999987 35 48999999986 689888764
No 476
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=1e-33 Score=311.71 Aligned_cols=219 Identities=27% Similarity=0.311 Sum_probs=167.9
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCC
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKK 923 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~ 923 (1106)
+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 45777777653 24699999999999999999999999999999999997421135899999998764
Q ss_pred hh---c-ccceEEEEccCCCCCCCCCHHHHHHHhhh-hc-C-CCC-CChHHHHHHHHHHHHHcCCC-cccccccCCCCCC
Q 001291 924 QE---T-FARISGYCEQNDIHSPFVTVYESLFYSAW-LR-L-PPE-VNSETRKMFIEEVMELVELK-PLRQSLVGLPGVN 994 (1106)
Q Consensus 924 ~~---~-~~~~~g~v~q~~~~~~~~tv~e~l~~~~~-~~-~-~~~-~~~~~~~~~v~~~l~~~~l~-~~~~~~~~~~g~~ 994 (1106)
.. . .++.++|++|++..++.+|+.+++.+... ++ . ... ........+++++++.+++. ...+..+ ..
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 21 1 22468999999887777776665533211 11 0 000 11122345678889999985 3444332 12
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHh-cCeEEEEecCC
Q 001291 995 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1073 (1106)
Q Consensus 995 ~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~-~D~v~~l~~gG 1073 (1106)
+||+|||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++++.|+|||++|||++. +... +|++++|+ +|
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~-~g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLY-QG 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEE-CC
Confidence 599999999999999999999999999999999999999999999998778999999999873 5555 89999997 47
Q ss_pred EEEEEecC
Q 001291 1074 REVYVGPL 1081 (1106)
Q Consensus 1074 ~~~~~G~~ 1081 (1106)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 89998875
No 477
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=9e-34 Score=306.20 Aligned_cols=196 Identities=27% Similarity=0.388 Sum_probs=162.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFV------PERTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999987 999999999875432 135799999999888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccC
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+|+.||+.++...... .. ..+....++.+++.+||.+..++.+.+
T Consensus 95 ~~~t~~~n~~~~~~~~~~---------~~------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 141 (220)
T TIGR02982 95 GFLTARQNVQMALELQPN---------LS------------------------YQEARERARAMLEAVGLGDHLDYYPHN 141 (220)
T ss_pred CCCCHHHHHHHHHHhccC---------CC------------------------HHHHHHHHHHHHHHcCChhhhhcChhh
Confidence 889999999987543210 00 001123467789999998887777654
Q ss_pred ccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEe
Q 001291 319 EMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILL 398 (1106)
Q Consensus 319 ~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL 398 (1106)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....+ .+++.++|+.. +.+++|+|++|
T Consensus 142 -----lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sh~~~-~~~~~d~v~~l 214 (220)
T TIGR02982 142 -----LSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQG-CTILIVTHDNR-ILDVADRIVHM 214 (220)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHH-HHhhCCEEEEE
Confidence 999999999999999999999999999999999999999999998764334 44555566665 56899999999
Q ss_pred cCCeE
Q 001291 399 SDGQI 403 (1106)
Q Consensus 399 ~~G~i 403 (1106)
.+|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 478
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=313.04 Aligned_cols=206 Identities=22% Similarity=0.283 Sum_probs=165.8
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++|++++|+|+|||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 59999999999999999999999999999999999987521 1389999999877431 1235799999998878
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----ccccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1106)
+ +||+||+.++....+.- ++ .+....++.+++.+|+. +..++
T Consensus 101 ~-~tv~enl~~~~~~~~~~-------------------~~--------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKL-------------------PQ--------------ADLDEIVESALKGAALWQEVKDKLNK 146 (259)
T ss_pred C-ccHHHHHHHHHHHhcCC-------------------CH--------------HHHHHHHHHHHHHcCCcchhhhHhcC
Confidence 7 89999998875432100 00 00112345667777773 34455
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.++ .|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+.+++.+++|+
T Consensus 147 ~~~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~~~~d~ 218 (259)
T PRK14260 147 SAL-----GLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQATRVSDF 218 (259)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCe
Confidence 444 4999999999999999999999999999999999999999999998742 3 5667788899999999999
Q ss_pred EEEec-----CCeEEEEcCHHHHH
Q 001291 395 IILLS-----DGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~-----~G~iv~~G~~~~~~ 413 (1106)
+++|+ +|+++++|+++++.
T Consensus 219 i~~l~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 219 TAFFSTDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred EEEEeccCCCCceEEEeCCHHHHh
Confidence 99997 59999999999874
No 479
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-35 Score=291.28 Aligned_cols=211 Identities=24% Similarity=0.354 Sum_probs=184.7
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIG 239 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 239 (1106)
.++.+|+|+|..|++|.+|+++|||||||||||.+++.+++.+ +|+|+++|.++..... .+.++..-|+.....
T Consensus 12 ~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~d---~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~~ 88 (252)
T COG4604 12 GTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKKD---SGEITIDGLELTSTPSKELAKKLSILKQENHINS 88 (252)
T ss_pred CCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcccc---CceEEEeeeecccCChHHHHHHHHHHHhhchhhh
Confidence 4567999999999999999999999999999999999999988 9999999999876644 367888999888888
Q ss_pred CCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCc
Q 001291 240 EMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+|-+.|+.--..-|. + ..+....++..++.|+|++..|....+
T Consensus 89 rlTV~dLv~FGRfPYSqGR------------------l--------------t~eD~~~I~~aieyl~L~~l~dryLd~- 135 (252)
T COG4604 89 RLTVRDLVGFGRFPYSQGR------------------L--------------TKEDRRIINEAIEYLHLEDLSDRYLDE- 135 (252)
T ss_pred eeEHHHHhhcCCCcccCCC------------------C--------------chHHHHHHHHHHHHhcccchHHHhHHh-
Confidence 9999999999853221111 0 112345688899999999999988865
Q ss_pred cCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEec
Q 001291 320 MRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLS 399 (1106)
Q Consensus 320 ~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~ 399 (1106)
||||||||.-||..++.+.+.+|||||.+.||...+.++++.||++++..++|+|+ +.|+...+..++|+|+-|.
T Consensus 136 ----LSGGQrQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~Ktivi-VlHDINfAS~YsD~IVAlK 210 (252)
T COG4604 136 ----LSGGQRQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVV-VLHDINFASCYSDHIVALK 210 (252)
T ss_pred ----cccchhhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEE-EEecccHHHhhhhheeeec
Confidence 99999999999999999999999999999999999999999999999988777666 5688999999999999999
Q ss_pred CCeEEEEcCHHHHHH
Q 001291 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|+++.+|+++++..
T Consensus 211 ~G~vv~~G~~~eii~ 225 (252)
T COG4604 211 NGKVVKQGSPDEIIQ 225 (252)
T ss_pred CCEEEecCCHHHhcC
Confidence 999999999999863
No 480
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-34 Score=313.61 Aligned_cols=212 Identities=20% Similarity=0.305 Sum_probs=166.4
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCccCCCCC-----ccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEFV-----PERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|... |+...+|+|+++|.++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999976 21113899999998764321 24579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCccccccccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++. ||+||+.++....+.... ..+....++.+++.+||.+...+.+.
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~ 144 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKN--------------------------------KKKLDEIVEKSLTSVGLWEELGDRLK 144 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCC--------------------------------HHHHHHHHHHHHHHcCCCchhhhHhh
Confidence 875 999999986433211000 00011235667889998652211111
Q ss_pred CccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001291 318 DEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIIL 397 (1106)
Q Consensus 318 ~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vil 397 (1106)
...+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. . +.+|++++|+..++.+++|+|++
T Consensus 145 -~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~-~~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 145 -DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--K-NFTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred -cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--c-CCeEEEEeCCHHHHHhhcCEEEE
Confidence 1234599999999999999999999999999999999999999999999863 3 45666778888899999999999
Q ss_pred ecCCeEEEEcCHHHHH
Q 001291 398 LSDGQIVYQGPRELVL 413 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1106)
|++|++++.|+++++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988764
No 481
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-34 Score=275.15 Aligned_cols=216 Identities=25% Similarity=0.332 Sum_probs=181.2
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
++..++++++|. ..++|.||+++.+.||.+.|+||||||||||+++|.=... +.+|+..|.|..-
T Consensus 2 sirv~~in~~yg-------------~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~--p~sg~l~ia~~~f 66 (242)
T COG4161 2 SIQLNGINCFYG-------------AHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHF 66 (242)
T ss_pred ceEEcccccccc-------------cchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhC--CCCCeEEeccccc
Confidence 466777877663 4579999999999999999999999999999999976544 3478887776431
Q ss_pred --C-----h--hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCC
Q 001291 923 --K-----Q--ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGV 993 (1106)
Q Consensus 923 --~-----~--~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~ 993 (1106)
+ + ...++.+|.|+|+..++|.+||.||+.-.- .+. ...++++.+....++++.+.|.+++|+..
T Consensus 67 d~s~~~~~k~i~~lr~~vgmvfqqy~lwphltv~enlieap-~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~p----- 139 (242)
T COG4161 67 DFSKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQENLIEAP-CRV-LGLSKDQALARAEKLLKRLRLKPYADRYP----- 139 (242)
T ss_pred ccccCccHHHHHHHHHhhhhhhhhhccCchhHHHHHHHhhh-HHH-hCCCHHHHHHHHHHHHHHhccccccccCc-----
Confidence 1 1 245678999999999999999999986432 221 24556777788899999999999998763
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
-.|||||+|||+|||||+.+|++|++||||++|||+-.+.|.++|+++...|.|=+++||..+. ..+.+.+++.|++ |
T Consensus 140 lhlsggqqqrvaiaralmmkpqvllfdeptaaldpeitaqvv~iikel~~tgitqvivthev~v-a~k~as~vvyme~-g 217 (242)
T COG4161 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEV-ARKTASRVVYMEN-G 217 (242)
T ss_pred eecccchhhhHHHHHHHhcCCcEEeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhH-HHhhhhheEeeec-C
Confidence 3699999999999999999999999999999999999999999999999999999999998864 4567899999985 7
Q ss_pred EEEEEecCC
Q 001291 1074 REVYVGPLG 1082 (1106)
Q Consensus 1074 ~~~~~G~~~ 1082 (1106)
++++.|+-.
T Consensus 218 ~ive~g~a~ 226 (242)
T COG4161 218 HIVEQGDAS 226 (242)
T ss_pred eeEeecchh
Confidence 999999754
No 482
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-34 Score=329.84 Aligned_cols=226 Identities=18% Similarity=0.258 Sum_probs=179.8
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++.. ..+.+|+|+||+|++|+++||+||||||||||+++|+|..++ ..|+|.++|.+.
T Consensus 21 mL~lknL~~~~~~~----------~~~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P--~sGeI~I~G~~~ 88 (549)
T PRK13545 21 FDKLKDLFFRSKDG----------EYHYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMP--NKGTVDIKGSAA 88 (549)
T ss_pred eeEEEEEEEecCCC----------ccceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CceEEEECCEee
Confidence 46777777665321 124699999999999999999999999999999999998763 589999998641
Q ss_pred ChhcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHH
Q 001291 923 KQETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRK 1002 (1106)
Q Consensus 923 ~~~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrq 1002 (1106)
.++ +...+.+.+|++||+.+..... ....+...+.+.++++.+++.+..+..+ .+|||||||
T Consensus 89 -------~i~---~~~~l~~~lTV~EnL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~-----~~LSGGQrQ 150 (549)
T PRK13545 89 -------LIA---ISSGLNGQLTGIENIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPV-----KTYSSGMKS 150 (549)
T ss_pred -------eEE---eccccCCCCcHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCc-----ccCCHHHHH
Confidence 122 2334456689999998754322 1223344456788999999987777654 469999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1003 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1003 rl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
|++|||||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 151 RVaLArAL~~~P~LLLLDEPTsgLD~~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~~-GkIv~~G~~~ 228 (549)
T PRK13545 151 RLGFAISVHINPDILVIDEALSVGDQTFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLHY-GQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999999999999999999998877999999999987 57788999999985 7899999876
Q ss_pred CchhHHHHHHHhCCCCcc
Q 001291 1083 HHSCHLISYFEVCPDAHF 1100 (1106)
Q Consensus 1083 ~~~~~~~~yf~~~~g~~~ 1100 (1106)
+.....-.|++..+|.++
T Consensus 229 el~~~~~~~~~~~~~~~~ 246 (549)
T PRK13545 229 EVVDHYDEFLKKYNQMSV 246 (549)
T ss_pred HHHhhHHHHHHHHhhcCh
Confidence 544455567776666654
No 483
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=5.6e-34 Score=302.66 Aligned_cols=184 Identities=25% Similarity=0.320 Sum_probs=154.0
Q ss_pred ceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccCCh--hcccceEEEEccCCCCCCCCC
Q 001291 868 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPKKQ--ETFARISGYCEQNDIHSPFVT 945 (1106)
Q Consensus 868 ~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~g~v~q~~~~~~~~t 945 (1106)
++.+|+|+||+|++|++++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (198)
T TIGR01189 12 ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELS 89 (198)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEcccchHHhhhheEEeccCcccccCCc
Confidence 35699999999999999999999999999999999997653 58999999987532 223467899999988888899
Q ss_pred HHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCC
Q 001291 946 VYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1025 (1106)
Q Consensus 946 v~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsg 1025 (1106)
+.||+.+....+. .+ +..+.++++.+++.+..+..+ .+||+|||||++|||||+.+|++|+|||||+|
T Consensus 90 v~~~l~~~~~~~~-----~~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~ 157 (198)
T TIGR01189 90 ALENLHFWAAIHG-----GA--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTTA 157 (198)
T ss_pred HHHHHHHHHHHcC-----Cc--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999987543321 11 235688999999987766653 46999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEE
Q 001291 1026 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1068 (1106)
Q Consensus 1026 LD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~ 1068 (1106)
||+.++..+++.|++++++|.|||++||++. + -.+++++.
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~--~~~~~~~~ 197 (198)
T TIGR01189 158 LDKAGVALLAGLLRAHLARGGIVLLTTHQDL-G--LVEARELR 197 (198)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEcccc-c--ccceEEee
Confidence 9999999999999998778999999999975 2 34677654
No 484
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=312.98 Aligned_cols=206 Identities=20% Similarity=0.306 Sum_probs=165.6
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+.|++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 5999999999999999999999999999999999998741 01289999999887531 1246799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----cccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1106)
+. ||+||+.+.....+... + ......++.+++.+++.. ..+.
T Consensus 119 ~~-tv~enl~~~~~~~~~~~--~-------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 164 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINN--R-------------------------------RVLDEAVERSLRGAALWDEVKDRLHE 164 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCc--H-------------------------------HHHHHHHHHHHHHcCCChhHHHHhhC
Confidence 75 99999998754332100 0 001123456677788753 2344
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.+ +.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+..++.+++|+
T Consensus 165 ~~-----~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~ 236 (272)
T PRK14236 165 NA-----FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDY 236 (272)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCE
Confidence 33 45999999999999999999999999999999999999999999998753 3 4566678888999999999
Q ss_pred EEEecCCeEEEEcCHHHHH
Q 001291 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|++++.|+++++.
T Consensus 237 i~~l~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 237 TAFMYMGKLVEYGDTDTLF 255 (272)
T ss_pred EEEEECCEEEecCCHHHHh
Confidence 9999999999999988763
No 485
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=310.75 Aligned_cols=207 Identities=22% Similarity=0.292 Sum_probs=165.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDP--SLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
+.+|+|+|+++++|++++|+||||||||||+++|+|..++ +...+|+|.++|+++... ..++.++|++|++.+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 98 (253)
T PRK14261 19 KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNP 98 (253)
T ss_pred eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCcc
Confidence 3599999999999999999999999999999999998753 111389999999987542 123579999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----ccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CAD 313 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~d 313 (1106)
++ .||+||+.|+.+..+... .......++.+++.++|.+ ..+
T Consensus 99 ~~-~tv~eni~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~~~~ 144 (253)
T PRK14261 99 FP-KSIYENVAYGPRIHGEKN---------------------------------KKTLDTIVEKSLKGAALWDEVKDRLH 144 (253)
T ss_pred Cc-ccHHHHHHhhHHhcCCCC---------------------------------HHHHHHHHHHHHHHhcCchhhHHHhh
Confidence 87 499999998754322100 0001123455677777743 234
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
+.+ +.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.+++|
T Consensus 145 ~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d 216 (253)
T PRK14261 145 DSA-----LSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSD 216 (253)
T ss_pred cCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCC
Confidence 444 45999999999999999999999999999999999999999999998753 3 566677888899999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
++++|++|+++..|+.+++.
T Consensus 217 ~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 217 YTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred EEEEEECCEEEEcCCHHHHH
Confidence 99999999999999988764
No 486
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=7.4e-34 Score=312.15 Aligned_cols=201 Identities=27% Similarity=0.386 Sum_probs=168.6
Q ss_pred eeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCCCH
Q 001291 167 ILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 243 (1106)
+|+|+|+++++|++++|+||||||||||+++|+|.++ . +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999984 3 8999999998754332 2468999999888888999
Q ss_pred HHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCCC
Q 001291 244 RETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~rg 323 (1106)
+||+.+..... . . ..+....++.+++.+||.+..++.++.
T Consensus 87 ~~nl~~~~~~~-~-~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (248)
T PRK03695 87 FQYLTLHQPDK-T-R---------------------------------TEAVASALNEVAEALGLDDKLGRSVNQ----- 126 (248)
T ss_pred HHHHHhcCccC-C-C---------------------------------cHHHHHHHHHHHHHcCCHhHhcCCccc-----
Confidence 99998753110 0 0 000123456789999998877877765
Q ss_pred CChhhhhHHHHHHHHhc-------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001291 324 VSGGQKKRVTTGEMMVG-------PALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDII 396 (1106)
Q Consensus 324 LSGGqkqRvsia~al~~-------~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vi 396 (1106)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-Q-GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999998753 3 4567778888899999999999
Q ss_pred EecCCeEEEEcCHHHHH
Q 001291 397 LLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999987763
No 487
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=311.98 Aligned_cols=208 Identities=23% Similarity=0.328 Sum_probs=166.3
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSL--KVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 369999999999999999999999999999999999987631 1379999999887531 123579999999989
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----cccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1106)
++.+|+.||+.++....+.... ++....++..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRDR---------------------------------DHLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCcchhhhhhhc
Confidence 9999999999876542211000 00111233445555542 3445
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
+.+++ ||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++. .+ +++++++|+..++.+++|
T Consensus 144 ~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 TPATG-----LSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK--KV-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred CCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCC
Confidence 55544 99999999999999999999999999999999999999999999874 23 566778888899999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|++++.|+++++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999998874
No 488
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-34 Score=313.18 Aligned_cols=211 Identities=24% Similarity=0.373 Sum_probs=163.5
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.+.++|+++.++. .+.+++|+||+|++|++++|+||||||||||+++|+|..++ ..|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYDE------------KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecCC------------CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 3677888876531 23589999999999999999999999999999999998653 479999999765
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccccccc-C-----CCCC
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQSLV-G-----LPGV 993 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~-~-----~~g~ 993 (1106)
.. ..+++.++|++|++.+++. |+.||+.+... ... ...+.++++.+++.+..+... + ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 32 2345679999999877664 99999976521 111 122344455555443332211 0 0113
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecCC
Q 001291 994 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1073 (1106)
Q Consensus 994 ~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~gG 1073 (1106)
.+||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 5799999999999999999999999999999999999999999999985 5899999999987 34 56999999985 7
Q ss_pred EEEEEecC
Q 001291 1074 REVYVGPL 1081 (1106)
Q Consensus 1074 ~~~~~G~~ 1081 (1106)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88887653
No 489
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.8e-34 Score=294.39 Aligned_cols=209 Identities=23% Similarity=0.354 Sum_probs=186.5
Q ss_pred ccceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCC
Q 001291 163 KHLTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1106)
..+++++|+||.++||+|++++|||||||||.+++|.|++.|+ +|+|+++|.+++... ...|||.|.+.-+++.+|
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMT 88 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccCc
Confidence 4568999999999999999999999999999999999999998 999999999987543 347999999999999999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
|.|.|.|-++++|+.. ++.....++.|+.+++.......|-+
T Consensus 89 v~dql~yla~LkGm~~----------------------------------~e~~~~~~~wLer~~i~~~~~~kIk~---- 130 (300)
T COG4152 89 VEDQLKYLAELKGMPK----------------------------------AEIQKKLQAWLERLEIVGKKTKKIKE---- 130 (300)
T ss_pred HHHHHHHHHHhcCCcH----------------------------------HHHHHHHHHHHHhccccccccchHHH----
Confidence 9999999999998632 12334577889999999888777755
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCCe
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDGQ 402 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G~ 402 (1106)
||-|.+|++-+-.+++.+|++++||||+|||||.++..+-+.+.++.. .+++|+..+|.+..+.++||++++|++|+
T Consensus 131 -LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL~kG~ 207 (300)
T COG4152 131 -LSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLMLKKGQ 207 (300)
T ss_pred -hhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhheecCCc
Confidence 999999999999999999999999999999999999999999988753 46667777899999999999999999999
Q ss_pred EEEEcCHHHHHHHH
Q 001291 403 IVYQGPRELVLEFF 416 (1106)
Q Consensus 403 iv~~G~~~~~~~~f 416 (1106)
.|.+|+.+++..-|
T Consensus 208 ~V~~G~v~~ir~~~ 221 (300)
T COG4152 208 TVLYGTVEDIRRSF 221 (300)
T ss_pred eEEeccHHHHHHhc
Confidence 99999999998744
No 490
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=309.12 Aligned_cols=207 Identities=20% Similarity=0.297 Sum_probs=163.8
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEECCccCCCC-----CccceEEEEcCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--PSLKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 359999999999999999999999999999999999865 3211389999999877421 124579999999887
Q ss_pred CCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----cccc
Q 001291 238 IGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----ICAD 313 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1106)
++ .||+||+.+.....+.... +.....+...++.+++. +..+
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~~ 143 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK---------------------------------AVLDEAVETSLKQAAIWDEVKDHLH 143 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCccchhhHHh
Confidence 87 7999999987543221000 00011234456666653 2334
Q ss_pred ccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001291 314 TMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFD 393 (1106)
Q Consensus 314 t~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D 393 (1106)
..++ .||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. + .++++++|+..++.+++|
T Consensus 144 ~~~~-----~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d 215 (252)
T PRK14255 144 ESAL-----SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISD 215 (252)
T ss_pred cCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCC
Confidence 4444 4999999999999999999999999999999999999999999998743 3 566668888899999999
Q ss_pred eEEEecCCeEEEEcCHHHHH
Q 001291 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|+++..|+..++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 216 KTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988764
No 491
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=8.4e-34 Score=344.90 Aligned_cols=215 Identities=22% Similarity=0.251 Sum_probs=172.9
Q ss_pred eecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcC-----
Q 001291 845 TFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISG----- 919 (1106)
Q Consensus 845 ~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g----- 919 (1106)
.++|+++.++ ++.+|+|+||+|++|+++||+||||||||||+++|+|.....+.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~ 68 (520)
T TIGR03269 2 EVKNLTKKFD-------------GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEK 68 (520)
T ss_pred EEEEEEEEEC-------------CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccc
Confidence 4567776652 3469999999999999999999999999999999999741013579998872
Q ss_pred ------------------ccC----------Ch---hcccceEEEEccC-CCCCCCCCHHHHHHHhhhhcCCCCCChHHH
Q 001291 920 ------------------YPK----------KQ---ETFARISGYCEQN-DIHSPFVTVYESLFYSAWLRLPPEVNSETR 967 (1106)
Q Consensus 920 ------------------~~~----------~~---~~~~~~~g~v~q~-~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~ 967 (1106)
.+. .. ...++.+||++|+ +.+++.+|++||+.|..... ....++.
T Consensus 69 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~ 145 (520)
T TIGR03269 69 CGYVERPSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEI---GYEGKEA 145 (520)
T ss_pred ccccccccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHc---CCCHHHH
Confidence 111 00 1134568999997 56777889999998864332 1223344
Q ss_pred HHHHHHHHHHcCCCcccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCc
Q 001291 968 KMFIEEVMELVELKPLRQSLVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGR 1046 (1106)
Q Consensus 968 ~~~v~~~l~~~~l~~~~~~~~~~~g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~ 1046 (1106)
++.+.++++.+++.+..++.+ .+|||||||||+|||||+.+|++|||||||+|||+.++..+++.|+++++ .|+
T Consensus 146 ~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~ 220 (520)
T TIGR03269 146 VGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGI 220 (520)
T ss_pred HHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCc
Confidence 567889999999987776653 46999999999999999999999999999999999999999999999865 489
Q ss_pred eEEEEecCccHHHHHhcCeEEEEecCCEEEEEecCC
Q 001291 1047 TVVCTIHQPSIDIFEAFDELFLMKRGGREVYVGPLG 1082 (1106)
Q Consensus 1047 tvi~~tH~~~~~~~~~~D~v~~l~~gG~~~~~G~~~ 1082 (1106)
|||+||||++ .+.+.||++++|++ |++++.|+..
T Consensus 221 tviivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 254 (520)
T TIGR03269 221 SMVLTSHWPE-VIEDLSDKAIWLEN-GEIKEEGTPD 254 (520)
T ss_pred EEEEEeCCHH-HHHHhcCEEEEEeC-CEEeeecCHH
Confidence 9999999997 46778999999985 6888887653
No 492
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3e-34 Score=354.28 Aligned_cols=209 Identities=22% Similarity=0.385 Sum_probs=164.9
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 46999999999999999999999999999999999999998 9999999999876543 468999999987665 7
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
|++|||.++.... .+.+...++.... -.+..++ .|++..||.+|+. +
T Consensus 432 Ti~~Ni~~~~~~~------------------------~~~~~i~~al~~~------~l~~~i~--~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYARTEQ------------------------YSREQIEEAARMA------YAMDFIN--KMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCCCC------------------------CCHHHHHHHHHHh------CcHHHHH--hcccccCceeCCC-C
Confidence 9999998853100 0000001000000 0011111 3566789999964 5
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
+.||||||||++||||++++|+|++||||||+||+.++..+.+.|+++. .++|+|+ ++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~-VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLV-IAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCEEEEEECC
Confidence 6699999999999999999999999999999999999999999998753 3455555 45554 567889999999999
Q ss_pred eEEEEcCHHHHHH
Q 001291 402 QIVYQGPRELVLE 414 (1106)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1106)
+++..|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 493
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=310.77 Aligned_cols=208 Identities=23% Similarity=0.298 Sum_probs=168.1
Q ss_pred eeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 001291 166 TILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPS--LKVSGRVTYNGHNMDEF-----VPERTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +..+|+|.++|+++... ..++.++|++|+..++
T Consensus 21 ~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~ 100 (261)
T PRK14258 21 KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLF 100 (261)
T ss_pred eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccC
Confidence 5999999999999999999999999999999999999874 12479999999886421 1245699999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcc----cccc
Q 001291 239 GEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDI----CADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~----~~dt 314 (1106)
+ +||+||+.+.....+... . .+....+..+++.+||.. ..++
T Consensus 101 ~-~tv~enl~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 146 (261)
T PRK14258 101 P-MSVYDNVAYGVKIVGWRP---------K------------------------LEIDDIVESALKDADLWDEIKHKIHK 146 (261)
T ss_pred c-ccHHHHHHHHHHhcCCCc---------H------------------------HHHHHHHHHHHHHcCCcchhhhHhcC
Confidence 7 899999988653221100 0 001123566788888754 2344
Q ss_pred cccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001291 315 MVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDD 394 (1106)
Q Consensus 315 ~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~ 394 (1106)
.+ ..||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++... +++|+.++|+..++.++||+
T Consensus 147 ~~-----~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~-~~tiiivsH~~~~i~~~~d~ 220 (261)
T PRK14258 147 SA-----LDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRS-ELTMVIVSHNLHQVSRLSDF 220 (261)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHhcCE
Confidence 44 3499999999999999999999999999999999999999999999875433 45666678889999999999
Q ss_pred EEEecC-----CeEEEEcCHHHHH
Q 001291 395 IILLSD-----GQIVYQGPRELVL 413 (1106)
Q Consensus 395 vilL~~-----G~iv~~G~~~~~~ 413 (1106)
|++|++ |+++++|+++++.
T Consensus 221 i~~l~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 221 TAFFKGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred EEEEccCCCcCceEEEeCCHHHHH
Confidence 999999 9999999999874
No 494
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.3e-33 Score=345.87 Aligned_cols=213 Identities=26% Similarity=0.367 Sum_probs=176.0
Q ss_pred eeeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEcCccC
Q 001291 843 SLTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRISGYPK 922 (1106)
Q Consensus 843 ~l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~g~~~ 922 (1106)
.++++||+|+++. .++++|+|+|++|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 330 ~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~--~~G~I~i~g~~i 396 (571)
T TIGR02203 330 DVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEP--DSGQILLDGHDL 396 (571)
T ss_pred eEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCeEEECCEeH
Confidence 6999999998852 124699999999999999999999999999999999998764 479999999876
Q ss_pred Ch---hcccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCccccc-------ccCCCC
Q 001291 923 KQ---ETFARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPLRQS-------LVGLPG 992 (1106)
Q Consensus 923 ~~---~~~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~~~~g 992 (1106)
++ ..+++.++||+|++.++. .|++||+.++. +.+. .++.++++++.+++.+..++ .++..|
T Consensus 397 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~----~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g 467 (571)
T TIGR02203 397 ADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQA----DRAEIERALAAAYAQDFVDKLPLGLDTPIGENG 467 (571)
T ss_pred HhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCC----CHHHHHHHHHHcChHHHHHhCcCcccceecCCC
Confidence 43 345678999999998764 69999997652 1112 23457788888888654433 344333
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEecC
Q 001291 993 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1072 (1106)
Q Consensus 993 ~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~~g 1072 (1106)
..||||||||++||||++++|+||+||||||+||+.+++.+++.|+++. +++|+|++||+++ ....||++++|++
T Consensus 468 -~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~ii~l~~- 542 (571)
T TIGR02203 468 -VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRIVVMDD- 542 (571)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEEEEEeC-
Confidence 4699999999999999999999999999999999999999999999875 4799999999985 5688999999975
Q ss_pred CEEEEEecCC
Q 001291 1073 GREVYVGPLG 1082 (1106)
Q Consensus 1073 G~~~~~G~~~ 1082 (1106)
|+++..|+..
T Consensus 543 g~i~~~g~~~ 552 (571)
T TIGR02203 543 GRIVERGTHN 552 (571)
T ss_pred CEEEeeCCHH
Confidence 7899888743
No 495
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.5e-33 Score=298.11 Aligned_cols=170 Identities=40% Similarity=0.650 Sum_probs=147.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEECCccCCCCCccceEEEEcCCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKL--DPSLKVSGRVTYNGHNMDEFVPERTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999999 887 9999999998764333567999999988889999
Q ss_pred HHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccCC
Q 001291 243 VRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMRR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~r 322 (1106)
++||+.+..++ +
T Consensus 99 ~~~~i~~~~~~-----------------------------------------------------------~--------- 110 (194)
T cd03213 99 VRETLMFAAKL-----------------------------------------------------------R--------- 110 (194)
T ss_pred HHHHHHHHHHh-----------------------------------------------------------c---------
Confidence 99999864210 0
Q ss_pred CCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh-hHHHhhcCeEEEecCC
Q 001291 323 GVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPA-PETYNLFDDIILLSDG 401 (1106)
Q Consensus 323 gLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~-~~~~~~~D~vilL~~G 401 (1106)
.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++.. .+.|+|+ ++|+. .++.+++|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 3999999999999999999999999999999999999999999998754 3445444 55555 4788999999999999
Q ss_pred eEEEEc
Q 001291 402 QIVYQG 407 (1106)
Q Consensus 402 ~iv~~G 407 (1106)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 496
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.1e-33 Score=306.37 Aligned_cols=210 Identities=24% Similarity=0.283 Sum_probs=165.0
Q ss_pred eeecceeeeeeccchhhhcccCCCceEEeeeeeeeeeCCeEEEEEcCCCCCHHHHHHhhhCCCCCceeEEEEEEc--Cc-
Q 001291 844 LTFDEVVYSVDMPQQMKLQGVPEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGDIRIS--GY- 920 (1106)
Q Consensus 844 l~f~~v~y~v~~p~~~~~~~~~~~~~~~L~~vs~~i~~Ge~~al~G~nGaGKSTLl~~l~g~~~~~~~~G~i~i~--g~- 920 (1106)
+.++|+++.++.... ...+..+|+|+||+|++||+++|+|+||||||||+++|+|..++ ..|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 467788777642100 00124699999999999999999999999999999999998653 47999998 42
Q ss_pred -cCCh---hc----ccceEEEEccCCCCCCCCCHHHHHHHhhhhcCCCCCChHHHHHHHHHHHHHcCCCcc-cccccCCC
Q 001291 921 -PKKQ---ET----FARISGYCEQNDIHSPFVTVYESLFYSAWLRLPPEVNSETRKMFIEEVMELVELKPL-RQSLVGLP 991 (1106)
Q Consensus 921 -~~~~---~~----~~~~~g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~v~~~l~~~~l~~~-~~~~~~~~ 991 (1106)
+... .. .++.+||++|++.+++.+|+.|++.+..... ........+.+.++++.+++.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3221 11 1346899999998888899999998754322 12223344567889999999753 3433
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCceEEEEecCccHHHHHhcCeEEEEe
Q 001291 992 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1070 (1106)
Q Consensus 992 g~~~LS~Gqrqrl~iA~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~tH~~~~~~~~~~D~v~~l~ 1070 (1106)
+.+||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ .+...||+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 3469999999999999999999999999999999999999999999999877999999999976 3567899998763
No 497
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.8e-34 Score=361.93 Aligned_cols=206 Identities=24% Similarity=0.338 Sum_probs=163.6
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++.+... ++.++||+|++.+| +.
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf-~g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLF-EG 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhh-hc
Confidence 46999999999999999999999999999999999999998 9999999999876543 57899999988766 57
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
|++|||.++.. +.+.+...++....+ .+..+ -.|+...||.+|+ .+
T Consensus 568 Ti~eNi~l~~~-------------------------~~~~~~i~~al~~~~------l~~~i--~~lp~gl~t~i~e-~G 613 (710)
T TIGR03796 568 TVRDNLTLWDP-------------------------TIPDADLVRACKDAA------IHDVI--TSRPGGYDAELAE-GG 613 (710)
T ss_pred cHHHHhhCCCC-------------------------CCCHHHHHHHHHHhC------CHHHH--HhCcCcccceecc-CC
Confidence 99999987521 001011111110000 01111 1356677899986 45
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
.+||||||||++||||++++|++|+||||||+||+.+...|.+.|++ .++|+|+ ++|..+ ....||+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl~-~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRLS-TIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCHH-HHHhCCEEEEEeCC
Confidence 67999999999999999999999999999999999999999999875 3455555 555554 55679999999999
Q ss_pred eEEEEcCHHHHHH
Q 001291 402 QIVYQGPRELVLE 414 (1106)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1106)
+++.+|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 498
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.9e-34 Score=358.93 Aligned_cols=206 Identities=27% Similarity=0.417 Sum_probs=160.5
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+++|+|+|++++|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++.+... ++.++||+|++.+| +.
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF-~g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLF-SG 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCcccc-cc
Confidence 46999999999999999999999999999999999999998 9999999999876543 47899999988666 57
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCcccccccccCccC
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLDICADTMVGDEMR 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
|++|||.++.... + .+ + ..++....+ .+..++ .|++..||.+|+ .+
T Consensus 570 TIreNI~~g~~~~---~-~e---~------------------i~~al~~a~------l~~~i~--~lp~GldT~ige-~G 615 (711)
T TIGR00958 570 SVRENIAYGLTDT---P-DE---E------------------IMAAAKAAN------AHDFIM--EFPNGYDTEVGE-KG 615 (711)
T ss_pred CHHHHHhcCCCCC---C-HH---H------------------HHHHHHHcC------CHHHHH--hCCCccCCcccC-CC
Confidence 9999999863210 0 00 0 000000000 011111 355667999986 35
Q ss_pred CCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEecCC
Q 001291 322 RGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDIILLSDG 401 (1106)
Q Consensus 322 rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~vilL~~G 401 (1106)
..||||||||++||||++++|+|++||||||+||+.+...+.+ .. ...++| ++.++|..+ ..+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~---~~~~~T-vIiItHrl~-~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR---SRASRT-VLLIAHRLS-TVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh---ccCCCe-EEEEeccHH-HHHhCCEEEEEECC
Confidence 6799999999999999999999999999999999999998887 22 123444 445566554 56789999999999
Q ss_pred eEEEEcCHHHHHH
Q 001291 402 QIVYQGPRELVLE 414 (1106)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1106)
+++.+|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999864
No 499
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=319.76 Aligned_cols=204 Identities=20% Similarity=0.346 Sum_probs=165.0
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCC--C---CCCceeEEEECCccCCCC-----CccceEEEEcCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLD--P---SLKVSGRVTYNGHNMDEF-----VPERTAAYISQH 234 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~---~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~ 234 (1106)
..+|+|+|++|++|++++|+|||||||||||++|+|..+ | + +|+|.++|.++... ..++.++|++|+
T Consensus 52 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~ 128 (286)
T PRK14275 52 FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQK 128 (286)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCC
Confidence 359999999999999999999999999999999999854 3 5 99999999876432 124579999999
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCCc----c
Q 001291 235 DNHIGEMTVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGLD----I 310 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~ 310 (1106)
+.+++. ||+||+.|+....+... .......+..+++.+|+. +
T Consensus 129 ~~l~~~-tv~enl~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~l~~ 174 (286)
T PRK14275 129 PNPFPK-SIFDNIAYGPRLHGIND---------------------------------KKQLEEIVEKSLRKAALWDEVSD 174 (286)
T ss_pred CCCCcc-CHHHHHHhHHHhcCCCc---------------------------------HHHHHHHHHHHHHHhCCccchhh
Confidence 887774 99999998754322100 000112345567777763 3
Q ss_pred cccccccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHh
Q 001291 311 CADTMVGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYN 390 (1106)
Q Consensus 311 ~~dt~vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~ 390 (1106)
..++.++ .|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.. + .+|++++|+..++.+
T Consensus 175 ~~~~~~~-----~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~~~ 246 (286)
T PRK14275 175 RLDKNAL-----GLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQASR 246 (286)
T ss_pred HhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHH
Confidence 3455444 4999999999999999999999999999999999999999999998742 3 567778899999999
Q ss_pred hcCeEEEecCCeEEEEcCHHHHH
Q 001291 391 LFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 391 ~~D~vilL~~G~iv~~G~~~~~~ 413 (1106)
++|++++|++|++++.|+++++.
T Consensus 247 ~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 247 VSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999988774
No 500
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5e-34 Score=350.18 Aligned_cols=201 Identities=28% Similarity=0.443 Sum_probs=165.1
Q ss_pred ceeeeceeEEEeCceEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 001291 165 LTILKDVSGIVKPGRLTLLLGPPSSGKTTLLLALAGKLDPSLKVSGRVTYNGHNMDEFVP---ERTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|++.+|+ .
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-A 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-c
Confidence 36999999999999999999999999999999999999998 9999999999877544 467999999986665 6
Q ss_pred CHHHHHHHHHHhcCCCcchhhhhHhhHHHHhcCCCCCCChHHHHHhhcchhhhHhHHHHHHHHHcCC------ccccccc
Q 001291 242 TVRETLAFAARCQGVGTRYEMLTELSRREKAAGIKPDPDIDVFMKAASTEGEEANVITDYYLKVLGL------DICADTM 315 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~ek~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~ 315 (1106)
|++||+.++..- .+ +..+..+++..|+ ++..||.
T Consensus 429 ti~~Ni~~~~~~-------------------------~~---------------~~~i~~al~~~~l~~~i~~p~GldT~ 468 (574)
T PRK11160 429 TLRDNLLLAAPN-------------------------AS---------------DEALIEVLQQVGLEKLLEDDKGLNAW 468 (574)
T ss_pred cHHHHhhcCCCc-------------------------cC---------------HHHHHHHHHHcCCHHHHcCccccCch
Confidence 999999886320 00 0112233444444 4567899
Q ss_pred ccCccCCCCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001291 316 VGDEMRRGVSGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCFKQNIHINSGTAVISLLQPAPETYNLFDDI 395 (1106)
Q Consensus 316 vg~~~~rgLSGGqkqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~ii~i~q~~~~~~~~~D~v 395 (1106)
+|+. ++.||||||||++||||++.+|++|+|||||++||+.++..|.+.|++.. .++|+|++ +|..+. ...||+|
T Consensus 469 vge~-g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviii-tHr~~~-~~~~d~i 543 (574)
T PRK11160 469 LGEG-GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMI-THRLTG-LEQFDRI 543 (574)
T ss_pred hcCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEE-ecChhH-HHhCCEE
Confidence 9963 56699999999999999999999999999999999999999999998763 35565554 454444 4669999
Q ss_pred EEecCCeEEEEcCHHHHHH
Q 001291 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|+++..|+++++.+
T Consensus 544 ~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 544 CVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEeCCeEEEeCCHHHHHh
Confidence 9999999999999998864
Done!