BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>001292
MAVPNTMYRKYIKIVRMPDDFGFRIVPVVTRTGSKAGLLKSTGCNEEKHNGSGSNSPRTD
SDDDNAAAAATTTSGNNDQQQHPHSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHRHVN
STPSAANAATSGPRFNRKGFSSLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGA
ERGRPIREELRFGSRLKFVPDQVGFGNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLL
LITVVKNLQKLGYVFKIYAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSL
EAKEAISSLMQEPFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFP
DYTLPMLYSVLDAGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSS
FFYNELSWDYAVAMHDVGPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGL
LEHSVRHYGFNGDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEY
VAEGAQVIFFQKDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYAR
ILENVLNFPSDALLPGPISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVV
DLLEEEFTKNITENENRSADQDTISELDWDVLHDIESSEEYERLEMEQLEERMDGTFASW
DDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGLALSS
AARRLRSDDVDAVSRLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGR
KVSLSISAEKVLEETVQETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRT
AFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALN
ANSSKVNSCLLSSSELEKKHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERR
RGFMWMKYFNFTLLKSMDEDLAEAADDGDYPREKWLWPWTGEVHWKGIYEREREERYRQK
MDKKRKMKEKMFDRLTKGYRQKTLGG

High Scoring Gene Products

Symbol, full name Information P value
AT5G04480 protein from Arabidopsis thaliana 5.8e-311
AT4G01210 protein from Arabidopsis thaliana 6.6e-162

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  001292
        (1106 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2184437 - symbol:AT5G04480 species:3702 "Arabi...  2983  5.8e-311  1
TAIR|locus:2124953 - symbol:AT4G01210 species:3702 "Arabi...   873  6.6e-162  2


>TAIR|locus:2184437 [details] [associations]
            symbol:AT5G04480 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0009058 "biosynthetic
            process" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
            network" evidence=IDA] [GO:0016757 "transferase activity,
            transferring glycosyl groups" evidence=ISM] InterPro:IPR001296
            Pfam:PF00534 GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0009058 GO:GO:0005768 GO:GO:0016740 GO:GO:0005802
            EMBL:AY052353 EMBL:BT001086 IPI:IPI00538612 RefSeq:NP_568137.1
            UniGene:At.26496 ProteinModelPortal:Q940Y7 PaxDb:Q940Y7
            PRIDE:Q940Y7 EnsemblPlants:AT5G04480.1 GeneID:830327
            KEGG:ath:AT5G04480 TAIR:At5g04480 eggNOG:NOG322369
            HOGENOM:HOG000029739 InParanoid:Q940Y7 OMA:SMCDILN PhylomeDB:Q940Y7
            ProtClustDB:CLSN2689455 Genevestigator:Q940Y7 Uniprot:Q940Y7
        Length = 1050

 Score = 2983 (1055.1 bits), Expect = 5.8e-311, P = 5.8e-311
 Identities = 579/1035 (55%), Positives = 719/1035 (69%)

Query:    84 HSIRDRFRFKRNPNHTQDKTQTKPSLHRYLLRHR--HVXXXXXXXXXXXXGPRFNRKGFS 141
             HSIRDR R KRN +  +D++ +   L R  LR R  H+            G   NRKG  
Sbjct:    36 HSIRDRLRLKRNSSDRRDRSHS--GLDRPSLRTRPHHI------------GRSLNRKGLL 81

Query:   142 SLFPFRGAYLLYFMIFLAVFAFAMASMVLQNSIASVFGAERGRPIREELRFGSRLKFVPD 201
             SL   RG  LLYF++   V AF M+S++LQNSI    G  +G  +R ++  GS LK+VP 
Sbjct:    82 SLLKPRGTCLLYFLVAFTVCAFVMSSLLLQNSITWQ-GNVKGGQVRSQIGLGSTLKYVPG 140

Query:   202 QVGF----GNGLDGLRSTPRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYVFKI 257
              +      G GLD LRS  R GVRPPR+ L+LGNM KD R+L+L+TV+KNLQKLGYVFK+
Sbjct:   141 GIARTLIEGKGLDPLRSAVRIGVRPPRLALVLGNMKKDPRTLMLVTVMKNLQKLGYVFKV 200

Query:   258 YAVRSGNSHSLWEQIAGQISILGQEQYSLIDWSIFDGIIADSLEAKEAISSLMQEPFHSI 317
             +AV +G + SLWEQ+AG + +L  EQ    DW+IF+G+IADSLEAKEAISSLMQEPF S+
Sbjct:   201 FAVENGEARSLWEQLAGHVKVLVSEQLGHADWTIFEGVIADSLEAKEAISSLMQEPFRSV 260

Query:   318 PLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLDAGNFF 377
             PL+WI+ ED LANRLPVY   G  +L+S+W+S F+R +V+VFP +TLPML+SVLD GNF 
Sbjct:   261 PLIWIVHEDILANRLPVYQRMGQNSLISHWRSAFARADVVVFPQFTLPMLHSVLDDGNFV 320

Query:   378 VIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAVAMHDV 437
             VIP S  DVWA E+YS++H K  LR+ N F +D+++++V+GSSFFY+E SWD AVAMH +
Sbjct:   321 VIPESVVDVWAAESYSETHTKQNLREINEFGEDDVIILVLGSSFFYDEFSWDNAVAMHML 380

Query:   438 GPLLIKYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFNGDVNGV 497
             GPLL +Y RR    GSFKFVFL GNST G +DA+QEVASRLGL E +VRH+G N DVN V
Sbjct:   381 GPLLTRYGRRKDTSGSFKFVFLYGNSTKGQSDAVQEVASRLGLTEGTVRHFGLNEDVNRV 440

Query:   498 LLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQKDNPEG 557
             L MADI++Y SSQ EQ FP LIVRAM+FGIP+ITPDFPI+K+Y+A+    IFF++++P+ 
Sbjct:   441 LRMADILVYASSQEEQNFPPLIVRAMSFGIPIITPDFPIMKKYMADEVHGIFFRRNDPDA 500

Query:   558 LSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSDALLPGP 617
             L +AFS  IS+G+LSKFA+T+AS+GRL  KN++A +C+T YAR+LEN+L+FPSD  LPG 
Sbjct:   501 LLKAFSPLISDGRLSKFAQTIASSGRLLTKNLMATECITGYARLLENMLHFPSDTFLPGS 560

Query:   618 ISQLQQVSWEWNLFRKEIDLGTGDILNMDEWGTSTSSRNSSVVDLLEEEF-----TKNIT 672
             ISQLQ  +WEWN FR E++     IL+            S +V  +EE+F     + N  
Sbjct:   561 ISQLQVAAWEWNFFRSELEQPKSFILD----SAYAFIGKSGIVFQVEEKFMGVIESTNPV 616

Query:   673 ENENRSADQDTISELDWDVLHDIXXXXXXXXXXXXXXXXXXDGTFASWDDIYRNARKSER 732
             +N       +  S+LDWDVL +I                  +     W++IYRNARKSE+
Sbjct:   617 DNNTLFVSDELPSKLDWDVLEEIEGAEEYEKVESEELEDRMERDVEDWEEIYRNARKSEK 676

Query:   733 FKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGXXXXXXXXXXXXXXXXX 792
              KFE NERDEGELERTG+P+CIYEIY+G+GAWPFLHHGSLYRG                 
Sbjct:   677 LKFEVNERDEGELERTGEPLCIYEIYNGAGAWPFLHHGSLYRGLSLSSKDRRLSSDDVDA 736

Query:   793 XXXLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAAGRKVSLSISAEKVL 852
                L LLN T+YRDILCEIGGMFS+ANKVD+IH RPWIGFQSWRAAGRKVSLS  AE+ L
Sbjct:   737 ADRLPLLNDTYYRDILCEIGGMFSVANKVDSIHMRPWIGFQSWRAAGRKVSLSSKAEESL 796

Query:   853 EETV-QETEGDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGHCRTAFEDAFRQMYG 911
             E  + QET+G+++YFW  LD+DG    + N  LTFWSMCDILN G+CRT FEDAFR MYG
Sbjct:   797 ENIIKQETKGEIIYFWTRLDIDGDAYGSKN-ALTFWSMCDILNQGNCRTTFEDAFRHMYG 855

Query:   912 LPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLDALNAXXXXXXXXXX 971
             LP H+EALPPMPEDG  WS+LH WVM TPSFLEF+MFSRMF +SLDAL+           
Sbjct:   856 LPEHIEALPPMPEDGHHWSSLHNWVMPTPSFLEFVMFSRMFSESLDALHNNLNDSKSCSL 915

Query:   972 XXXXXXXXHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPIERRRGFMWMKYFNF 1031
                     HCYCRVLELLVNVWAYHSGRKMVY++P  GSL+EQHP+++R+G MW KYFNF
Sbjct:   916 ASSLLERKHCYCRVLELLVNVWAYHSGRKMVYINPRDGSLEEQHPLQQRKGLMWAKYFNF 975

Query:  1032 TLLKSMXXXXXXXXXXXXYPREKWLWPWTGEVHWKGIXXXXXXXXXXQXXXXXXXXXXXX 1091
             TLLKSM            +PRE+WLWP TGEVHWKG+                       
Sbjct:   976 TLLKSMDEDLAEAADDKDHPRERWLWPLTGEVHWKGVYEREREERYRLKMDKKRKTKEKL 1035

Query:  1092 FDRLTKGYRQKTLGG 1106
             +DR+  GY+QK+LGG
Sbjct:  1036 YDRIKNGYKQKSLGG 1050


>TAIR|locus:2124953 [details] [associations]
            symbol:AT4G01210 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009058 "biosynthetic
            process" evidence=IEA;ISS] [GO:0016757 "transferase activity,
            transferring glycosyl groups" evidence=ISM;ISS] [GO:0001666
            "response to hypoxia" evidence=RCA] [GO:0019375 "galactolipid
            biosynthetic process" evidence=RCA] [GO:0005768 "endosome"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            [GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001296
            Pfam:PF00534 GO:GO:0005794 GO:GO:0009058 EMBL:CP002687
            GO:GO:0005768 GO:GO:0016740 GO:GO:0005802 IPI:IPI00542780
            RefSeq:NP_192030.4 UniGene:At.32583 UniGene:At.3800
            ProteinModelPortal:F4JHZ4 PRIDE:F4JHZ4 EnsemblPlants:AT4G01210.1
            GeneID:828040 KEGG:ath:AT4G01210 OMA:INAGNCR Uniprot:F4JHZ4
        Length = 1031

 Score = 873 (312.4 bits), Expect = 6.6e-162, Sum P(2) = 6.6e-162
 Identities = 164/350 (46%), Positives = 213/350 (60%)

Query:   719 SWDDIYRNARKSERFKFEANERDEGELERTGQPVCIYEIYSGSGAWPFLHHGSLYRGXXX 778
             +W+D+Y++A++++R K + +ERDEGEL RTGQP+CIYE Y G G W FLH   LYRG   
Sbjct:   627 TWEDVYKSAKRADRSKNDLHERDEGELLRTGQPLCIYEPYFGEGTWSFLHQDPLYRGVGL 686

Query:   779 XXXXXXXXXXXXXXXXXLHLLNYTHYRDILCEIGGMFSIANKVDNIHKRPWIGFQSWRAA 838
                              L L N  +YRD L + G  F+I+NK+D +HK  WIGFQSWRA 
Sbjct:   687 SVKGRRPRMDDVDASSRLPLFNNPYYRDALGDFGAFFAISNKIDRLHKNSWIGFQSWRAT 746

Query:   839 GRKVSLSISAEKVLEETVQETE-GDVMYFWAHLDMDGGFTRNNNDVLTFWSMCDILNGGH 897
              RK SLS  AE  L   +Q  + GD +YFW  +D D    RN      FWS CD +N G+
Sbjct:   747 ARKESLSKIAEDALLNAIQTRKHGDALYFWVRMDKD---PRNPLQK-PFWSFCDAINAGN 802

Query:   898 CRTAFEDAFRQMYGLPSHVEALPPMPEDGGCWSALHGWVMQTPSFLEFIMFSRMFVDSLD 957
             CR A+ +  ++MY +  ++++LPPMPEDG  WS +  W + T SFLEF+MFSRMFVDSLD
Sbjct:   803 CRFAYNETLKKMYSI-KNLDSLPPMPEDGDTWSVMQSWALPTRSFLEFVMFSRMFVDSLD 861

Query:   958 ALNAXXXXXXXXXXXXXXXXXXHCYCRVLELLVNVWAYHSGRKMVYLDPLSGSLQEQHPI 1017
             A                     HCY RVLELLVNVWAYHS R++VY+DP +G +QEQH  
Sbjct:   862 A-QIYEEHHRTNRCYLSLTKDKHCYSRVLELLVNVWAYHSARRIVYIDPETGLMQEQHKQ 920

Query:  1018 ERRRGFMWMKYFNFTLLKSMXXXXXXXXXXXXYPREKWLWPWTGEVHWKG 1067
             + RRG MW+K+F++T LK+M                 WLWPWTGE+ W+G
Sbjct:   921 KNRRGKMWVKWFDYTTLKTMDEDLAEEADSDRRVGH-WLWPWTGEIVWRG 969

 Score = 725 (260.3 bits), Expect = 6.6e-162, Sum P(2) = 6.6e-162
 Identities = 154/448 (34%), Positives = 258/448 (57%)

Query:   196 LKFVPDQVGFGNGLDGLRST-PRFGVRPPRIGLILGNMAKDSRSLLLITVVKNLQKLGYV 254
             +KF  D  GF      L +T  RFG R P++ L+ G++  D   +L++++ K LQ++GY 
Sbjct:   119 MKFQRDAHGFNFTSSSLNTTLQRFGFRKPKLALVFGDLLADPEQVLMVSLSKALQEVGYA 178

Query:   255 FKIYAVRSGNSHSLWEQIAGQISIL--GQEQYSLIDWSIFDGIIADSLEAKEAISSLMQE 312
              ++Y++  G  +S+W+++   ++IL   QE   +IDW  +DGII +SL A+   +  MQE
Sbjct:   179 IEVYSLEDGPVNSIWQKMGVPVTILKPNQESSCVIDWLSYDGIIVNSLRARSMFTCFMQE 238

Query:   313 PFHSIPLVWIIQEDSLANRLPVYVERGFQNLLSYWKSVFSRVNVIVFPDYTLPMLYSVLD 372
             PF S+PL+W+I E++LA R   Y   G   LL+ WK +FSR +V+VF +Y LP+LY+  D
Sbjct:   239 PFKSLPLIWVINEETLAVRSRQYNSTGQTELLTDWKKIFSRASVVVFHNYLLPILYTEFD 298

Query:   373 AGNFFVIPGSPADVWAVEAYSKSHEKYQLRKENGFLKDEIVVVVVGSSFFYNELSWDYAV 432
             AGNF+VIPGSP +V      +K+ E +  +K      D++V+ +VGS F Y     ++A+
Sbjct:   299 AGNFYVIPGSPEEV----CKAKNLE-FPPQK------DDVVISIVGSQFLYKGQWLEHAL 347

Query:   433 AMHDVGPLLI-KYARRNSVEGSFKFVFLCGNSTDGYNDALQEVASRLGLLEHSVRHYGFN 491
              +  + PL    Y   ++     K + L G +   Y+ A++ ++  L   + +V+H    
Sbjct:   348 LLQALRPLFSGNYLESDN--SHLKIIVLGGETASNYSVAIETISQNLTYPKEAVKHVRVA 405

Query:   492 GDVNGVLLMADIVLYGSSQVEQGFPSLIVRAMTFGIPVITPDFPIIKEYVAEGAQVIFFQ 551
             G+V+ +L  +D+V+YGS   EQ FP ++++AM+ G P++ PD   I++YV +      F 
Sbjct:   406 GNVDKILESSDLVIYGSFLEEQSFPEILMKAMSLGKPIVAPDLFNIRKYVDDRVTGYLFP 465

Query:   552 KDNPEGLSRAFSLFISNGKLSKFARTVASAGRLHAKNMLALDCVTRYARILENVLNFPSD 611
             K N + LS+     I+ GK+S  A+ +A  G+   KNM+A + +  YA +LEN+L F S+
Sbjct:   466 KQNLKVLSQVVLEVITEGKISPLAQKIAMMGKTTVKNMMARETIEGYAALLENMLKFSSE 525

Query:   612 ALLPGPISQLQ---QVSWEWNLFRKEID 636
                P  + ++    +  W W+ F   +D
Sbjct:   526 VASPKDVQKVPPELREEWSWHPFEAFMD 553

 Score = 37 (18.1 bits), Expect = 2.5e-73, Sum P(2) = 2.5e-73
 Identities = 7/26 (26%), Positives = 15/26 (57%)

Query:   662 LLEEEFTKNITENENRSADQDTISEL 687
             L +E+  KN+ + E +   +D +S +
Sbjct:   971 LEKEKQKKNLEKEEKKKKSRDKLSRM 996


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.138   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1106       984   0.00098  122 3  11 22  0.36    34
                                                     38  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  639 (68 KB)
  Total size of DFA:  513 KB (2235 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  73.66u 0.18s 73.84t   Elapsed:  00:00:04
  Total cpu time:  73.66u 0.18s 73.84t   Elapsed:  00:00:04
  Start:  Sat May 11 07:29:59 2013   End:  Sat May 11 07:30:03 2013

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