Query 001293
Match_columns 1106
No_of_seqs 652 out of 5533
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 20:59:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001293.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001293hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 5E-192 1E-196 1736.1 68.5 997 36-1106 12-1029(1391)
2 PLN03140 ABC transporter G fam 100.0 3E-176 7E-181 1711.9 105.4 1084 19-1106 19-1118(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 1E-136 2E-141 1348.1 100.2 951 94-1106 3-1001(1394)
4 KOG0061 Transporter, ABC super 100.0 2.6E-84 5.6E-89 787.8 59.1 583 114-775 21-608 (613)
5 PLN03211 ABC transporter G-25; 100.0 6.5E-83 1.4E-87 783.7 64.7 609 114-775 35-658 (659)
6 TIGR00955 3a01204 The Eye Pigm 100.0 4.1E-83 8.8E-88 786.9 60.8 569 162-774 35-612 (617)
7 PLN03140 ABC transporter G fam 100.0 4.7E-81 1E-85 817.1 64.9 595 111-776 860-1467(1470)
8 KOG0055 Multidrug/pheromone ex 100.0 1E-80 2.2E-85 762.9 46.7 843 78-1093 314-1208(1228)
9 KOG0065 Pleiotropic drug resis 100.0 4.1E-78 8.8E-83 737.4 33.0 561 162-775 801-1383(1391)
10 TIGR00956 3a01205 Pleiotropic 100.0 4.6E-75 1E-79 764.8 62.4 559 164-774 775-1389(1394)
11 KOG0054 Multidrug resistance-a 100.0 2E-75 4.3E-80 733.8 51.2 803 78-1094 483-1358(1381)
12 TIGR01257 rim_protein retinal- 100.0 2.7E-72 5.9E-77 733.8 74.7 216 855-1093 1937-2154(2272)
13 PLN03130 ABC transporter C fam 100.0 1.6E-70 3.6E-75 728.4 60.6 212 853-1093 1235-1456(1622)
14 PTZ00265 multidrug resistance 100.0 1.3E-69 2.8E-74 713.4 57.7 216 854-1092 1164-1446(1466)
15 PLN03232 ABC transporter C fam 100.0 3.7E-69 8E-74 716.2 62.4 211 854-1093 1233-1453(1495)
16 COG1123 ATPase components of v 100.0 1.3E-68 2.8E-73 617.8 50.7 491 118-1093 5-514 (539)
17 TIGR00957 MRP_assoc_pro multi 100.0 4.7E-67 1E-71 697.0 65.8 211 854-1093 1283-1503(1522)
18 PRK13549 xylose transporter AT 100.0 1.8E-66 3.9E-71 628.4 50.9 457 166-1095 19-491 (506)
19 PRK10762 D-ribose transporter 100.0 3.6E-66 7.8E-71 625.0 50.5 449 166-1095 18-481 (501)
20 PRK09700 D-allose transporter 100.0 2.6E-66 5.7E-71 627.9 49.1 457 166-1093 19-493 (510)
21 PRK10261 glutathione transport 100.0 8.5E-66 1.8E-70 634.1 53.6 488 165-1094 29-549 (623)
22 TIGR01271 CFTR_protein cystic 100.0 1E-64 2.2E-69 672.5 63.9 210 854-1093 1216-1435(1490)
23 TIGR03269 met_CoM_red_A2 methy 100.0 2.6E-65 5.7E-70 620.7 52.8 217 856-1093 280-512 (520)
24 PRK15134 microcin C ABC transp 100.0 2.6E-65 5.6E-70 621.6 52.0 464 165-1093 22-510 (529)
25 PRK15439 autoinducer 2 ABC tra 100.0 2.8E-65 6E-70 617.6 50.8 453 166-1095 25-489 (510)
26 PTZ00243 ABC transporter; Prov 100.0 2.2E-64 4.7E-69 669.4 62.7 211 854-1093 1307-1528(1560)
27 TIGR02633 xylG D-xylose ABC tr 100.0 7.3E-65 1.6E-69 614.3 51.1 457 166-1094 15-488 (500)
28 PRK11288 araG L-arabinose tran 100.0 6.2E-65 1.3E-69 614.2 49.9 451 166-1096 18-483 (501)
29 PRK10982 galactose/methyl gala 100.0 8.3E-64 1.8E-68 603.3 49.2 453 165-1097 11-479 (491)
30 PRK10938 putative molybdenum t 100.0 1.2E-62 2.6E-67 593.5 44.7 214 855-1090 260-484 (490)
31 COG4172 ABC-type uncharacteriz 100.0 3.9E-61 8.5E-66 521.1 44.4 471 163-1093 21-511 (534)
32 PRK11819 putative ABC transpor 100.0 1.4E-60 3.1E-65 582.0 52.2 201 855-1092 324-527 (556)
33 PRK15064 ABC transporter ATP-b 100.0 6.6E-60 1.4E-64 574.3 52.3 198 855-1093 319-520 (530)
34 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 2.3E-59 5.1E-64 571.3 56.6 201 855-1092 322-525 (552)
35 PRK10636 putative ABC transpor 100.0 1.8E-57 3.8E-62 560.5 50.4 197 855-1093 312-512 (638)
36 PRK11147 ABC transporter ATPas 100.0 6.9E-57 1.5E-61 556.8 51.7 201 855-1092 319-522 (635)
37 PRK13409 putative ATPase RIL; 100.0 3.9E-57 8.5E-62 549.3 42.0 197 855-1093 340-537 (590)
38 COG1129 MglA ABC-type sugar tr 100.0 2E-56 4.4E-61 513.6 43.0 449 163-1089 19-481 (500)
39 PLN03073 ABC transporter F fam 100.0 1.3E-54 2.8E-59 535.7 47.0 199 855-1092 508-708 (718)
40 COG0488 Uup ATPase components 100.0 4.8E-54 1E-58 508.2 46.9 220 165-414 16-240 (530)
41 COG3845 ABC-type uncharacteriz 100.0 7.5E-52 1.6E-56 464.7 40.0 457 164-1094 16-488 (501)
42 KOG0061 Transporter, ABC super 100.0 5.4E-46 1.2E-50 452.5 23.5 241 852-1105 22-263 (613)
43 COG1126 GlnQ ABC-type polar am 100.0 1.8E-45 3.9E-50 373.0 22.3 220 164-435 14-238 (240)
44 KOG0927 Predicted transporter 100.0 1.9E-44 4.1E-49 405.4 31.4 202 854-1093 388-591 (614)
45 COG1126 GlnQ ABC-type polar am 100.0 8.8E-45 1.9E-49 368.0 22.0 214 856-1093 3-220 (240)
46 COG1135 AbcC ABC-type metal io 100.0 2.8E-43 6E-48 374.6 22.4 225 163-438 17-247 (339)
47 COG1125 OpuBA ABC-type proline 100.0 3.2E-43 6.9E-48 362.8 20.8 210 164-414 13-225 (309)
48 COG3839 MalK ABC-type sugar tr 100.0 1.2E-42 2.7E-47 385.5 23.1 217 167-434 18-235 (338)
49 COG1135 AbcC ABC-type metal io 100.0 7.9E-43 1.7E-47 371.1 20.4 219 856-1094 2-227 (339)
50 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.5E-42 5.3E-47 367.3 23.8 217 855-1095 4-224 (254)
51 COG1120 FepC ABC-type cobalami 100.0 1.4E-42 3.1E-47 371.2 19.9 209 165-413 15-227 (258)
52 COG3842 PotA ABC-type spermidi 100.0 2.6E-42 5.6E-47 385.0 22.5 223 164-436 17-240 (352)
53 COG1116 TauB ABC-type nitrate/ 100.0 4.5E-42 9.8E-47 359.8 21.8 207 855-1087 3-211 (248)
54 KOG0058 Peptide exporter, ABC 100.0 7.6E-43 1.7E-47 408.2 17.7 254 79-414 432-691 (716)
55 COG1120 FepC ABC-type cobalami 100.0 3.4E-42 7.5E-47 368.3 21.3 217 856-1094 3-224 (258)
56 COG1127 Ttg2A ABC-type transpo 100.0 7.7E-42 1.7E-46 351.9 22.4 209 165-414 21-235 (263)
57 COG1131 CcmA ABC-type multidru 100.0 1.1E-41 2.3E-46 381.0 24.8 215 856-1094 5-222 (293)
58 COG1116 TauB ABC-type nitrate/ 100.0 1.1E-41 2.5E-46 356.8 22.7 192 165-401 16-207 (248)
59 COG1127 Ttg2A ABC-type transpo 100.0 1.2E-41 2.6E-46 350.5 21.3 216 855-1094 8-231 (263)
60 COG1136 SalX ABC-type antimicr 100.0 2.3E-41 4.9E-46 355.2 23.3 193 881-1085 18-219 (226)
61 COG1118 CysA ABC-type sulfate/ 100.0 9.8E-42 2.1E-46 361.6 19.7 223 164-435 14-240 (345)
62 PLN03211 ABC transporter G-25; 100.0 2.9E-41 6.4E-46 415.4 27.1 247 853-1105 37-299 (659)
63 COG1125 OpuBA ABC-type proline 100.0 1.5E-41 3.3E-46 350.4 19.8 213 856-1093 2-220 (309)
64 COG3638 ABC-type phosphate/pho 100.0 3.3E-41 7.2E-46 346.3 21.9 215 165-414 17-237 (258)
65 COG1131 CcmA ABC-type multidru 100.0 3.1E-41 6.8E-46 377.2 23.6 212 164-418 17-230 (293)
66 COG3638 ABC-type phosphate/pho 100.0 1.6E-41 3.5E-46 348.6 18.6 220 855-1095 3-234 (258)
67 COG1117 PstB ABC-type phosphat 100.0 2.4E-41 5.2E-46 340.9 18.8 221 165-433 20-248 (253)
68 COG1118 CysA ABC-type sulfate/ 100.0 3.7E-41 8.1E-46 357.2 19.9 205 880-1094 14-223 (345)
69 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1E-40 2.2E-45 354.9 22.9 208 166-414 18-227 (254)
70 TIGR00955 3a01204 The Eye Pigm 100.0 4.3E-41 9.3E-46 414.5 23.2 241 855-1105 17-259 (617)
71 COG4555 NatA ABC-type Na+ tran 100.0 4.9E-41 1.1E-45 335.3 16.8 201 882-1094 16-218 (245)
72 COG2884 FtsE Predicted ATPase 100.0 1.7E-40 3.6E-45 329.1 20.3 215 856-1094 2-222 (223)
73 COG2274 SunT ABC-type bacterio 100.0 6.9E-41 1.5E-45 408.6 21.4 258 78-414 436-696 (709)
74 COG1136 SalX ABC-type antimicr 100.0 2.5E-40 5.4E-45 347.3 22.2 196 165-403 18-220 (226)
75 COG1117 PstB ABC-type phosphat 100.0 1.4E-40 3E-45 335.5 17.8 218 855-1094 7-233 (253)
76 COG3839 MalK ABC-type sugar tr 100.0 3.7E-40 8E-45 365.8 22.2 214 855-1093 3-218 (338)
77 COG4555 NatA ABC-type Na+ tran 100.0 2.2E-40 4.7E-45 330.7 17.3 206 165-414 15-222 (245)
78 TIGR02314 ABC_MetN D-methionin 100.0 2.4E-39 5.1E-44 368.4 27.9 206 165-413 18-229 (343)
79 PRK13537 nodulation ABC transp 100.0 2.1E-39 4.6E-44 365.9 26.6 215 855-1094 7-223 (306)
80 PRK11432 fbpC ferric transport 100.0 3.4E-39 7.3E-44 369.1 27.1 205 166-413 20-225 (351)
81 TIGR03265 PhnT2 putative 2-ami 100.0 3.3E-39 7.2E-44 369.8 26.8 206 166-414 18-224 (353)
82 PRK11650 ugpC glycerol-3-phosp 100.0 3.3E-39 7.1E-44 370.3 26.5 205 166-413 18-223 (356)
83 TIGR03258 PhnT 2-aminoethylpho 100.0 4E-39 8.7E-44 369.5 27.1 206 166-413 19-227 (362)
84 COG3842 PotA ABC-type spermidi 100.0 7.4E-40 1.6E-44 365.3 20.3 215 855-1093 5-221 (352)
85 TIGR02314 ABC_MetN D-methionin 100.0 6.2E-39 1.4E-43 364.9 26.4 217 856-1093 2-225 (343)
86 KOG0057 Mitochondrial Fe/S clu 100.0 1.2E-39 2.7E-44 368.6 20.3 229 110-414 343-574 (591)
87 PRK09452 potA putrescine/sperm 100.0 8.3E-39 1.8E-43 368.2 26.8 205 166-413 28-233 (375)
88 COG1122 CbiO ABC-type cobalt t 100.0 3.1E-39 6.8E-44 346.2 21.6 214 856-1093 4-223 (235)
89 PRK13537 nodulation ABC transp 100.0 1.1E-38 2.4E-43 360.0 27.1 205 166-414 21-227 (306)
90 cd03261 ABC_Org_Solvent_Resist 100.0 9.6E-39 2.1E-43 348.7 25.4 214 857-1094 2-222 (235)
91 COG1124 DppF ABC-type dipeptid 100.0 5E-39 1.1E-43 333.2 21.7 205 166-414 21-231 (252)
92 KOG0055 Multidrug/pheromone ex 100.0 1.3E-39 2.8E-44 401.2 20.2 258 78-414 951-1213(1228)
93 COG2274 SunT ABC-type bacterio 100.0 5.7E-38 1.2E-42 383.0 33.5 218 848-1093 464-691 (709)
94 COG2884 FtsE Predicted ATPase 100.0 4.8E-39 1E-43 318.7 18.9 200 165-408 15-220 (223)
95 COG1122 CbiO ABC-type cobalt t 100.0 7.1E-39 1.5E-43 343.4 21.7 207 165-414 17-228 (235)
96 PRK11650 ugpC glycerol-3-phosp 100.0 1.7E-38 3.7E-43 364.4 25.7 215 856-1094 4-220 (356)
97 TIGR03265 PhnT2 putative 2-ami 100.0 1.9E-38 4.1E-43 363.5 26.0 213 856-1093 5-219 (353)
98 KOG0058 Peptide exporter, ABC 100.0 1.6E-37 3.5E-42 363.7 34.2 220 846-1092 455-685 (716)
99 cd03261 ABC_Org_Solvent_Resist 100.0 2.6E-38 5.6E-43 345.3 25.9 206 166-413 14-225 (235)
100 PRK10851 sulfate/thiosulfate t 100.0 2.6E-38 5.7E-43 362.4 27.0 209 166-413 16-225 (353)
101 TIGR01186 proV glycine betaine 100.0 2E-38 4.3E-43 362.6 25.7 208 164-414 5-219 (363)
102 PRK13536 nodulation factor exp 100.0 2.8E-38 6.1E-43 360.3 26.5 215 855-1094 41-257 (340)
103 PRK11432 fbpC ferric transport 100.0 2.9E-38 6.2E-43 361.4 26.5 215 855-1094 6-222 (351)
104 KOG0056 Heavy metal exporter H 100.0 8.1E-40 1.8E-44 360.3 13.0 257 78-414 502-761 (790)
105 COG3840 ThiQ ABC-type thiamine 100.0 6.4E-39 1.4E-43 314.8 17.7 201 170-413 17-218 (231)
106 PRK11607 potG putrescine trans 100.0 4.1E-38 9E-43 363.1 27.6 205 166-413 33-238 (377)
107 cd03259 ABC_Carb_Solutes_like 100.0 2.6E-38 5.6E-43 340.1 24.2 210 857-1091 2-213 (213)
108 TIGR03258 PhnT 2-aminoethylpho 100.0 3.3E-38 7.2E-43 362.0 26.0 214 855-1093 5-223 (362)
109 TIGR00960 3a0501s02 Type II (G 100.0 2.8E-38 6.2E-43 340.5 23.9 207 856-1084 2-214 (216)
110 TIGR01257 rim_protein retinal- 100.0 6.3E-36 1.4E-40 393.0 50.4 216 854-1093 927-1144(2272)
111 KOG0062 ATPase component of AB 100.0 8.8E-38 1.9E-42 350.0 28.2 205 852-1093 359-564 (582)
112 PRK11000 maltose/maltodextrin 100.0 5E-38 1.1E-42 362.9 27.1 205 166-413 17-222 (369)
113 cd03293 ABC_NrtD_SsuB_transpor 100.0 6.6E-38 1.4E-42 338.6 25.7 215 857-1093 2-218 (220)
114 TIGR01188 drrA daunorubicin re 100.0 4.4E-38 9.6E-43 355.5 24.8 202 880-1093 5-208 (302)
115 PRK10851 sulfate/thiosulfate t 100.0 6E-38 1.3E-42 359.4 26.1 216 856-1093 3-221 (353)
116 COG0410 LivF ABC-type branched 100.0 4.6E-38 9.9E-43 324.0 22.1 206 165-414 16-226 (237)
117 cd03269 ABC_putative_ATPase Th 100.0 7.4E-38 1.6E-42 335.8 24.8 209 857-1091 2-210 (210)
118 PRK11153 metN DL-methionine tr 100.0 1E-37 2.2E-42 357.6 27.5 206 165-413 18-229 (343)
119 TIGR01288 nodI ATP-binding ABC 100.0 7.7E-38 1.7E-42 353.7 25.8 215 855-1094 4-220 (303)
120 cd03265 ABC_DrrA DrrA is the A 100.0 9.1E-38 2E-42 337.5 25.0 212 857-1093 2-216 (220)
121 COG1132 MdlB ABC-type multidru 100.0 1.6E-38 3.4E-43 390.5 21.6 255 78-414 295-552 (567)
122 PRK11174 cysteine/glutathione 100.0 3.2E-38 6.9E-43 389.9 24.0 255 78-414 314-572 (588)
123 cd03301 ABC_MalK_N The N-termi 100.0 1E-37 2.2E-42 335.5 24.8 210 857-1091 2-213 (213)
124 PRK09452 potA putrescine/sperm 100.0 1.1E-37 2.4E-42 358.9 26.1 214 855-1093 14-229 (375)
125 PRK13536 nodulation factor exp 100.0 1.5E-37 3.3E-42 354.3 26.9 205 166-414 55-261 (340)
126 cd03219 ABC_Mj1267_LivG_branch 100.0 1.2E-37 2.7E-42 340.3 25.0 215 857-1093 2-227 (236)
127 PRK13637 cbiO cobalt transport 100.0 1.6E-37 3.5E-42 348.2 26.6 218 165-425 20-248 (287)
128 cd03266 ABC_NatA_sodium_export 100.0 9.8E-38 2.1E-42 336.9 23.9 215 856-1091 2-218 (218)
129 COG1124 DppF ABC-type dipeptid 100.0 4.9E-38 1.1E-42 325.9 20.4 217 856-1095 4-228 (252)
130 PRK11153 metN DL-methionine tr 100.0 1.4E-37 2.9E-42 356.5 26.2 217 856-1093 2-225 (343)
131 cd03259 ABC_Carb_Solutes_like 100.0 1.2E-37 2.5E-42 335.1 24.1 199 166-407 14-213 (213)
132 cd03296 ABC_CysA_sulfate_impor 100.0 1.8E-37 3.8E-42 339.5 25.8 217 856-1094 3-222 (239)
133 COG1137 YhbG ABC-type (unclass 100.0 8.6E-39 1.9E-43 318.9 13.8 206 879-1094 15-224 (243)
134 cd03218 ABC_YhbG The ABC trans 100.0 1.5E-37 3.3E-42 338.7 24.9 213 857-1094 2-218 (232)
135 cd03265 ABC_DrrA DrrA is the A 100.0 1.9E-37 4.2E-42 335.0 25.4 204 166-412 14-219 (220)
136 TIGR01186 proV glycine betaine 100.0 1.5E-37 3.2E-42 355.4 25.8 203 879-1093 4-214 (363)
137 COG3840 ThiQ ABC-type thiamine 100.0 3.5E-38 7.6E-43 309.7 17.3 211 857-1094 3-215 (231)
138 PRK09536 btuD corrinoid ABC tr 100.0 1.4E-37 3E-42 359.8 25.4 217 856-1094 4-224 (402)
139 cd03268 ABC_BcrA_bacitracin_re 100.0 1.4E-37 3E-42 333.2 23.5 206 857-1091 2-208 (208)
140 PRK11000 maltose/maltodextrin 100.0 1.8E-37 3.9E-42 358.3 26.1 213 856-1093 4-218 (369)
141 COG0411 LivG ABC-type branched 100.0 3.6E-38 7.8E-43 327.3 18.0 221 163-414 15-239 (250)
142 TIGR01188 drrA daunorubicin re 100.0 1.2E-37 2.5E-42 352.1 23.9 206 165-414 6-213 (302)
143 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.4E-37 3.1E-42 335.6 23.5 208 856-1084 1-216 (218)
144 cd03296 ABC_CysA_sulfate_impor 100.0 3E-37 6.6E-42 337.7 26.2 209 166-413 16-225 (239)
145 TIGR02673 FtsE cell division A 100.0 1.7E-37 3.7E-42 334.1 23.5 206 856-1084 2-213 (214)
146 TIGR03522 GldA_ABC_ATP gliding 100.0 2.4E-37 5.2E-42 349.2 25.8 214 856-1095 3-218 (301)
147 cd03258 ABC_MetN_methionine_tr 100.0 2.2E-37 4.7E-42 337.7 24.5 217 856-1093 2-225 (233)
148 cd03260 ABC_PstB_phosphate_tra 100.0 2.1E-37 4.5E-42 336.5 24.0 213 857-1093 2-224 (227)
149 PRK11607 potG putrescine trans 100.0 3.9E-37 8.4E-42 355.0 27.6 214 855-1093 19-234 (377)
150 PRK13634 cbiO cobalt transport 100.0 3.1E-37 6.7E-42 346.4 25.9 218 165-425 20-249 (290)
151 TIGR01288 nodI ATP-binding ABC 100.0 3.6E-37 7.7E-42 348.3 26.6 205 166-414 18-224 (303)
152 PRK13637 cbiO cobalt transport 100.0 3E-37 6.6E-42 346.0 25.6 218 856-1093 3-229 (287)
153 cd03226 ABC_cobalt_CbiO_domain 100.0 1.3E-37 2.8E-42 332.6 21.5 191 881-1087 13-204 (205)
154 PRK09493 glnQ glutamine ABC tr 100.0 3.7E-37 7.9E-42 337.4 25.5 215 856-1094 2-221 (240)
155 PRK11629 lolD lipoprotein tran 100.0 5.5E-37 1.2E-41 334.4 26.7 217 855-1093 5-229 (233)
156 cd03256 ABC_PhnC_transporter A 100.0 2.3E-37 5E-42 339.3 23.9 217 857-1094 2-230 (241)
157 cd03258 ABC_MetN_methionine_tr 100.0 3.7E-37 7.9E-42 335.9 25.3 205 166-413 19-229 (233)
158 PRK13643 cbiO cobalt transport 100.0 4.8E-37 1E-41 344.5 26.7 224 166-433 20-255 (288)
159 cd03219 ABC_Mj1267_LivG_branch 100.0 3.8E-37 8.2E-42 336.5 25.2 213 166-412 14-230 (236)
160 cd03292 ABC_FtsE_transporter F 100.0 2.8E-37 6.1E-42 332.4 23.6 205 857-1084 2-212 (214)
161 cd03301 ABC_MalK_N The N-termi 100.0 4.2E-37 9.2E-42 330.7 24.8 199 166-407 14-213 (213)
162 cd03234 ABCG_White The White s 100.0 4.8E-37 1E-41 333.2 25.3 221 856-1091 4-226 (226)
163 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5E-37 1.1E-41 341.4 26.0 204 879-1094 35-246 (269)
164 PRK11264 putative amino-acid A 100.0 4.9E-37 1.1E-41 338.5 25.5 215 856-1094 4-229 (250)
165 COG4559 ABC-type hemin transpo 100.0 1.3E-37 2.9E-42 313.2 18.9 207 166-414 15-230 (259)
166 TIGR00960 3a0501s02 Type II (G 100.0 2.8E-37 6E-42 332.9 22.8 194 166-403 17-216 (216)
167 PRK13647 cbiO cobalt transport 100.0 4.6E-37 9.9E-42 342.4 25.0 215 855-1093 4-222 (274)
168 cd03293 ABC_NrtD_SsuB_transpor 100.0 6E-37 1.3E-41 331.1 25.2 201 165-410 17-219 (220)
169 cd03263 ABC_subfamily_A The AB 100.0 4.4E-37 9.5E-42 332.3 24.1 214 856-1093 1-216 (220)
170 cd03224 ABC_TM1139_LivF_branch 100.0 3.9E-37 8.6E-42 333.1 23.6 211 856-1093 1-216 (222)
171 cd03295 ABC_OpuCA_Osmoprotecti 100.0 5.3E-37 1.1E-41 336.4 24.8 214 857-1094 2-221 (242)
172 cd03218 ABC_YhbG The ABC trans 100.0 6.2E-37 1.4E-41 333.9 25.2 203 166-412 14-220 (232)
173 PRK11248 tauB taurine transpor 100.0 7.6E-37 1.7E-41 337.0 25.9 212 856-1093 2-215 (255)
174 TIGR03522 GldA_ABC_ATP gliding 100.0 8.5E-37 1.8E-41 344.7 26.9 205 165-414 15-221 (301)
175 TIGR02315 ABC_phnC phosphonate 100.0 3E-37 6.5E-42 338.8 22.3 218 856-1094 2-231 (243)
176 cd03260 ABC_PstB_phosphate_tra 100.0 3.9E-37 8.4E-42 334.3 22.8 203 166-411 14-226 (227)
177 cd03235 ABC_Metallic_Cations A 100.0 3.3E-37 7.2E-42 331.5 22.1 199 881-1091 12-213 (213)
178 PRK13650 cbiO cobalt transport 100.0 1E-36 2.2E-41 340.6 26.5 215 166-424 21-242 (279)
179 PRK11831 putative ABC transpor 100.0 9.5E-37 2.1E-41 339.3 26.1 216 855-1094 7-229 (269)
180 cd03224 ABC_TM1139_LivF_branch 100.0 7.2E-37 1.6E-41 331.1 24.3 202 166-413 14-220 (222)
181 PRK13651 cobalt transporter AT 100.0 6E-37 1.3E-41 345.3 24.6 219 856-1094 3-250 (305)
182 cd03264 ABC_drug_resistance_li 100.0 6.6E-37 1.4E-41 328.7 23.7 208 857-1091 2-211 (211)
183 PRK13634 cbiO cobalt transport 100.0 6E-37 1.3E-41 344.1 24.4 219 856-1094 3-231 (290)
184 cd03263 ABC_subfamily_A The AB 100.0 6.8E-37 1.5E-41 330.8 23.9 203 165-412 15-219 (220)
185 PRK13631 cbiO cobalt transport 100.0 7E-37 1.5E-41 346.7 25.0 218 855-1093 21-260 (320)
186 COG1137 YhbG ABC-type (unclass 100.0 4E-38 8.8E-43 314.1 13.0 210 163-414 15-228 (243)
187 PRK11831 putative ABC transpor 100.0 1.4E-36 3.1E-41 337.9 26.8 206 166-413 21-232 (269)
188 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.8E-37 6.1E-42 387.5 23.7 253 78-414 418-673 (686)
189 cd03262 ABC_HisP_GlnQ_permease 100.0 6.9E-37 1.5E-41 329.1 23.2 205 857-1084 2-211 (213)
190 PRK13647 cbiO cobalt transport 100.0 1.6E-36 3.5E-41 338.0 26.9 203 166-412 19-225 (274)
191 cd03269 ABC_putative_ATPase Th 100.0 8.6E-37 1.9E-41 327.5 23.8 197 166-407 14-210 (210)
192 cd03256 ABC_PhnC_transporter A 100.0 9.9E-37 2.1E-41 334.3 24.8 214 165-413 14-233 (241)
193 PRK13651 cobalt transporter AT 100.0 9.1E-37 2E-41 343.8 25.1 205 165-413 20-253 (305)
194 cd03257 ABC_NikE_OppD_transpor 100.0 8.9E-37 1.9E-41 331.8 24.1 217 856-1091 2-228 (228)
195 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.3E-36 2.8E-41 333.4 25.5 206 165-413 14-224 (242)
196 PRK13636 cbiO cobalt transport 100.0 1.1E-36 2.3E-41 341.0 25.3 216 855-1094 5-227 (283)
197 PRK13643 cbiO cobalt transport 100.0 9.7E-37 2.1E-41 342.0 24.9 218 856-1094 2-229 (288)
198 PRK10619 histidine/lysine/argi 100.0 1.7E-36 3.6E-41 335.5 26.3 216 855-1094 5-237 (257)
199 PRK10908 cell division protein 100.0 1.1E-36 2.4E-41 329.5 24.4 208 856-1087 2-215 (222)
200 PRK13631 cbiO cobalt transport 100.0 1.3E-36 2.8E-41 344.6 25.9 217 165-425 39-279 (320)
201 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.1E-36 2.5E-41 338.5 25.1 208 163-413 35-249 (269)
202 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 7.1E-37 1.5E-41 330.2 22.5 195 165-403 17-218 (218)
203 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-36 2.6E-41 352.0 25.7 208 166-413 17-227 (402)
204 COG4988 CydD ABC-type transpor 100.0 5E-37 1.1E-41 353.7 22.3 254 80-414 286-543 (559)
205 cd03225 ABC_cobalt_CbiO_domain 100.0 7.7E-37 1.7E-41 328.2 22.4 193 881-1084 14-210 (211)
206 PRK11629 lolD lipoprotein tran 100.0 2.2E-36 4.8E-41 329.6 26.2 201 165-409 22-229 (233)
207 PRK15079 oligopeptide ABC tran 100.0 1.9E-36 4.1E-41 344.5 26.6 208 165-413 34-250 (331)
208 PRK10895 lipopolysaccharide AB 100.0 1.4E-36 3E-41 333.0 24.5 215 856-1094 4-222 (241)
209 PRK13646 cbiO cobalt transport 100.0 1E-36 2.3E-41 341.6 24.1 218 856-1094 3-231 (286)
210 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.8E-36 6E-41 329.5 26.7 205 166-414 15-221 (236)
211 TIGR00972 3a0107s01c2 phosphat 100.0 1.9E-36 4.1E-41 333.1 25.6 214 856-1093 2-227 (247)
212 PRK13646 cbiO cobalt transport 100.0 1.6E-36 3.4E-41 340.2 25.4 207 165-414 20-235 (286)
213 PRK13650 cbiO cobalt transport 100.0 1.2E-36 2.5E-41 340.1 24.1 217 855-1094 4-225 (279)
214 PRK11247 ssuB aliphatic sulfon 100.0 1.4E-36 3.1E-41 334.4 24.2 207 855-1094 12-219 (257)
215 COG0410 LivF ABC-type branched 100.0 1E-36 2.2E-41 314.1 21.4 212 856-1093 4-221 (237)
216 cd03233 ABC_PDR_domain1 The pl 100.0 1.5E-36 3.3E-41 323.0 23.5 195 118-407 3-202 (202)
217 TIGR02315 ABC_phnC phosphonate 100.0 1.1E-36 2.4E-41 334.3 23.0 212 166-412 16-233 (243)
218 cd03268 ABC_BcrA_bacitracin_re 100.0 1.5E-36 3.2E-41 325.2 23.4 194 166-407 14-208 (208)
219 cd03266 ABC_NatA_sodium_export 100.0 1.7E-36 3.6E-41 327.3 23.8 198 166-407 19-218 (218)
220 PRK09473 oppD oligopeptide tra 100.0 2.9E-36 6.4E-41 343.1 26.9 214 165-414 29-251 (330)
221 TIGR03005 ectoine_ehuA ectoine 100.0 2.4E-36 5.1E-41 333.3 25.2 215 856-1094 1-232 (252)
222 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 3.2E-36 6.8E-41 329.0 25.9 213 856-1094 2-217 (236)
223 PRK11614 livF leucine/isoleuci 100.0 1.6E-36 3.5E-41 331.6 23.5 213 855-1094 5-222 (237)
224 COG4987 CydC ABC-type transpor 100.0 1.9E-37 4.1E-42 350.7 16.5 256 78-414 303-561 (573)
225 PRK13641 cbiO cobalt transport 100.0 2.4E-36 5.1E-41 339.0 25.3 219 856-1094 3-230 (287)
226 TIGR02211 LolD_lipo_ex lipopro 100.0 2.5E-36 5.3E-41 326.7 24.5 211 856-1088 2-220 (221)
227 cd03234 ABCG_White The White s 100.0 2.2E-36 4.8E-41 328.0 24.2 204 164-407 19-226 (226)
228 PRK11264 putative amino-acid A 100.0 3E-36 6.6E-41 332.2 25.5 204 166-413 17-232 (250)
229 PRK09493 glnQ glutamine ABC tr 100.0 3.5E-36 7.6E-41 329.6 25.8 204 166-413 15-224 (240)
230 COG4618 ArpD ABC-type protease 100.0 4.1E-37 8.9E-42 344.5 18.6 238 107-417 323-563 (580)
231 PRK13635 cbiO cobalt transport 100.0 4.1E-36 8.9E-41 335.4 26.6 205 166-414 21-229 (279)
232 TIGR03375 type_I_sec_LssB type 100.0 6.1E-37 1.3E-41 384.9 22.3 258 78-414 428-688 (694)
233 PRK15079 oligopeptide ABC tran 100.0 3.4E-36 7.3E-41 342.4 26.2 230 855-1094 8-247 (331)
234 PRK11300 livG leucine/isoleuci 100.0 2E-36 4.4E-41 334.6 23.7 219 855-1095 5-240 (255)
235 PRK10070 glycine betaine trans 100.0 2.4E-36 5.1E-41 349.3 25.3 206 165-413 41-253 (400)
236 PRK11160 cysteine/glutathione 100.0 7.7E-37 1.7E-41 375.1 22.3 256 78-414 304-562 (574)
237 PRK13644 cbiO cobalt transport 100.0 2.4E-36 5.2E-41 336.6 24.2 214 856-1094 2-220 (274)
238 cd03264 ABC_drug_resistance_li 100.0 2.3E-36 5.1E-41 324.4 23.2 196 166-407 14-211 (211)
239 TIGR03740 galliderm_ABC gallid 100.0 3.7E-36 7.9E-41 325.7 24.9 208 857-1094 2-209 (223)
240 cd03226 ABC_cobalt_CbiO_domain 100.0 1.4E-36 3.1E-41 324.6 21.4 192 165-404 13-205 (205)
241 COG4988 CydD ABC-type transpor 100.0 2E-36 4.3E-41 348.8 24.0 215 851-1093 316-538 (559)
242 PRK11124 artP arginine transpo 100.0 3.4E-36 7.5E-41 330.1 25.0 214 856-1094 3-226 (242)
243 PRK13652 cbiO cobalt transport 100.0 3.5E-36 7.6E-41 336.0 25.4 215 856-1094 4-223 (277)
244 COG0444 DppD ABC-type dipeptid 100.0 4.5E-36 9.7E-41 325.2 25.1 231 164-437 17-258 (316)
245 PRK13636 cbiO cobalt transport 100.0 4.1E-36 8.9E-41 336.3 25.7 206 166-414 20-231 (283)
246 PRK13548 hmuV hemin importer A 100.0 3.8E-36 8.2E-41 332.4 25.0 214 856-1094 3-226 (258)
247 PRK10790 putative multidrug tr 100.0 2.2E-36 4.7E-41 373.7 25.7 253 78-414 308-563 (592)
248 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.9E-37 1.5E-41 385.7 21.6 261 78-414 436-700 (710)
249 COG4175 ProV ABC-type proline/ 100.0 6E-37 1.3E-41 325.0 17.6 222 164-436 40-268 (386)
250 PRK14247 phosphate ABC transpo 100.0 5.8E-36 1.3E-40 329.9 26.0 217 856-1094 4-230 (250)
251 PRK11022 dppD dipeptide transp 100.0 5.6E-36 1.2E-40 340.5 26.6 214 165-414 20-243 (326)
252 TIGR03415 ABC_choXWV_ATP choli 100.0 3.2E-36 6.9E-41 345.8 24.8 208 163-413 35-253 (382)
253 cd03257 ABC_NikE_OppD_transpor 100.0 5.5E-36 1.2E-40 325.6 25.3 201 166-407 19-228 (228)
254 TIGR03411 urea_trans_UrtD urea 100.0 5.6E-36 1.2E-40 328.5 25.5 216 856-1094 3-227 (242)
255 PRK14267 phosphate ABC transpo 100.0 5.4E-36 1.2E-40 330.8 25.4 218 855-1094 4-233 (253)
256 TIGR01193 bacteriocin_ABC ABC- 100.0 7.7E-37 1.7E-41 384.8 21.3 257 78-414 438-697 (708)
257 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.2E-36 7E-41 323.3 23.0 194 886-1091 16-211 (211)
258 TIGR01978 sufC FeS assembly AT 100.0 5.4E-36 1.2E-40 328.8 25.3 219 856-1093 1-229 (243)
259 COG0411 LivG ABC-type branched 100.0 1.2E-36 2.5E-41 316.1 18.7 207 879-1094 15-235 (250)
260 COG4152 ABC-type uncharacteriz 100.0 1.1E-36 2.3E-41 312.5 18.2 203 879-1094 13-215 (300)
261 PRK11248 tauB taurine transpor 100.0 6.4E-36 1.4E-40 329.7 25.8 200 166-410 15-216 (255)
262 PTZ00265 multidrug resistance 100.0 6.4E-37 1.4E-41 404.3 21.2 263 78-414 1126-1452(1466)
263 PRK14273 phosphate ABC transpo 100.0 6.2E-36 1.3E-40 330.4 25.5 216 855-1094 7-234 (254)
264 PRK11176 lipid transporter ATP 100.0 1.2E-36 2.7E-41 375.5 22.2 257 78-414 308-567 (582)
265 PRK11308 dppF dipeptide transp 100.0 8.2E-36 1.8E-40 339.0 27.1 208 165-414 28-244 (327)
266 COG4559 ABC-type hemin transpo 100.0 1.4E-36 3E-41 305.9 18.2 215 856-1093 2-225 (259)
267 TIGR03410 urea_trans_UrtE urea 100.0 4.7E-36 1E-40 326.5 24.1 201 166-412 14-219 (230)
268 PRK11231 fecE iron-dicitrate t 100.0 4.5E-36 9.7E-41 331.6 24.2 217 856-1094 3-223 (255)
269 PRK13635 cbiO cobalt transport 100.0 4.2E-36 9.1E-41 335.4 24.0 215 856-1094 6-225 (279)
270 PRK14268 phosphate ABC transpo 100.0 8.1E-36 1.7E-40 330.1 26.1 215 855-1094 12-238 (258)
271 PRK11247 ssuB aliphatic sulfon 100.0 4.7E-36 1E-40 330.3 24.0 194 166-410 26-219 (257)
272 PRK10253 iron-enterobactin tra 100.0 4.5E-36 9.8E-41 333.3 23.9 218 855-1094 7-229 (265)
273 PRK14241 phosphate transporter 100.0 8.8E-36 1.9E-40 329.9 26.0 218 855-1094 4-238 (258)
274 TIGR00958 3a01208 Conjugate Tr 100.0 1.3E-36 2.9E-41 381.2 21.9 255 78-414 444-702 (711)
275 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.5E-35 1.4E-39 366.1 37.2 209 854-1093 450-668 (686)
276 PRK10895 lipopolysaccharide AB 100.0 6.7E-36 1.5E-40 327.6 24.6 205 166-413 17-225 (241)
277 TIGR03005 ectoine_ehuA ectoine 100.0 7.5E-36 1.6E-40 329.4 25.1 205 166-413 14-235 (252)
278 TIGR02211 LolD_lipo_ex lipopro 100.0 7.4E-36 1.6E-40 323.0 24.6 196 165-404 18-220 (221)
279 PRK10575 iron-hydroxamate tran 100.0 6.9E-36 1.5E-40 331.8 24.8 218 855-1094 11-233 (265)
280 cd03232 ABC_PDR_domain2 The pl 100.0 6.1E-36 1.3E-40 316.0 23.2 190 855-1091 3-192 (192)
281 PRK10744 pstB phosphate transp 100.0 9E-36 1.9E-40 330.1 25.6 220 851-1094 9-240 (260)
282 PRK10070 glycine betaine trans 100.0 6.8E-36 1.5E-40 345.5 25.6 202 880-1093 40-249 (400)
283 cd03267 ABC_NatA_like Similar 100.0 7.1E-36 1.5E-40 326.0 24.3 233 119-407 1-236 (236)
284 TIGR00972 3a0107s01c2 phosphat 100.0 1.2E-35 2.6E-40 326.7 26.3 206 166-413 15-231 (247)
285 PRK13649 cbiO cobalt transport 100.0 7.6E-36 1.6E-40 334.3 25.2 218 856-1094 3-230 (280)
286 PRK13639 cbiO cobalt transport 100.0 7.7E-36 1.7E-40 332.9 25.0 215 856-1094 2-222 (275)
287 PRK10584 putative ABC transpor 100.0 1.1E-35 2.4E-40 323.1 25.6 213 855-1089 6-226 (228)
288 PRK13638 cbiO cobalt transport 100.0 5.5E-36 1.2E-40 333.7 23.8 213 856-1093 2-220 (271)
289 PRK13641 cbiO cobalt transport 100.0 6.8E-36 1.5E-40 335.3 24.7 205 165-413 20-233 (287)
290 PRK13632 cbiO cobalt transport 100.0 7.3E-36 1.6E-40 332.6 24.8 204 166-413 23-230 (271)
291 PRK14245 phosphate ABC transpo 100.0 1.1E-35 2.5E-40 327.5 26.0 220 855-1094 3-230 (250)
292 PRK11614 livF leucine/isoleuci 100.0 7.2E-36 1.6E-40 326.5 24.2 202 166-413 19-225 (237)
293 cd03292 ABC_FtsE_transporter F 100.0 5.5E-36 1.2E-40 322.3 22.9 194 166-403 15-214 (214)
294 PRK13633 cobalt transporter AT 100.0 9.1E-36 2E-40 333.2 25.3 206 165-414 23-233 (280)
295 TIGR02769 nickel_nikE nickel i 100.0 9.5E-36 2.1E-40 330.7 25.2 224 856-1094 3-236 (265)
296 PRK14242 phosphate transporter 100.0 1.3E-35 2.9E-40 327.6 26.2 221 854-1094 5-233 (253)
297 TIGR03873 F420-0_ABC_ATP propo 100.0 7.9E-36 1.7E-40 329.8 24.1 217 856-1094 2-222 (256)
298 TIGR02673 FtsE cell division A 100.0 7.7E-36 1.7E-40 321.2 23.4 193 166-402 16-214 (214)
299 PRK14273 phosphate ABC transpo 100.0 1.5E-35 3.2E-40 327.4 26.3 206 166-413 21-237 (254)
300 TIGR03410 urea_trans_UrtE urea 100.0 7.2E-36 1.6E-40 325.0 23.4 211 857-1095 2-218 (230)
301 TIGR01277 thiQ thiamine ABC tr 100.0 9.4E-36 2E-40 320.1 24.0 198 883-1092 13-212 (213)
302 PRK13548 hmuV hemin importer A 100.0 1.2E-35 2.6E-40 328.5 25.2 205 166-413 16-229 (258)
303 PRK09984 phosphonate/organopho 100.0 9.4E-36 2E-40 330.4 24.4 220 855-1094 4-238 (262)
304 PRK13652 cbiO cobalt transport 100.0 1.4E-35 3.1E-40 331.1 25.9 205 166-413 18-226 (277)
305 cd03300 ABC_PotA_N PotA is an 100.0 1.4E-35 3E-40 323.0 25.0 212 857-1093 2-215 (232)
306 TIGR03411 urea_trans_UrtD urea 100.0 1.6E-35 3.4E-40 324.9 25.6 210 166-412 16-229 (242)
307 PRK13648 cbiO cobalt transport 100.0 1.9E-35 4.2E-40 329.0 26.5 215 166-424 23-244 (269)
308 TIGR03415 ABC_choXWV_ATP choli 100.0 1.3E-35 2.7E-40 340.9 25.7 204 879-1094 35-250 (382)
309 cd03233 ABC_PDR_domain1 The pl 100.0 1.2E-35 2.6E-40 316.2 23.7 196 855-1091 3-202 (202)
310 KOG0057 Mitochondrial Fe/S clu 100.0 2.2E-36 4.8E-41 342.2 19.0 212 852-1093 348-569 (591)
311 PRK13644 cbiO cobalt transport 100.0 1.2E-35 2.5E-40 331.2 24.6 203 166-413 16-223 (274)
312 PRK11300 livG leucine/isoleuci 100.0 1.8E-35 3.8E-40 327.1 25.9 220 166-413 19-242 (255)
313 PRK11308 dppF dipeptide transp 100.0 1.9E-35 4.2E-40 335.9 26.8 226 855-1094 5-240 (327)
314 PRK14237 phosphate transporter 100.0 2.4E-35 5.3E-40 327.6 27.0 226 849-1094 14-247 (267)
315 PRK13649 cbiO cobalt transport 100.0 2.5E-35 5.5E-40 330.1 27.3 205 165-413 20-233 (280)
316 PRK10619 histidine/lysine/argi 100.0 1.7E-35 3.8E-40 327.3 25.6 204 166-413 19-240 (257)
317 PRK14268 phosphate ABC transpo 100.0 2.1E-35 4.7E-40 326.7 26.4 209 166-413 26-241 (258)
318 PRK11022 dppD dipeptide transp 100.0 2.3E-35 4.9E-40 335.5 27.2 223 856-1093 4-238 (326)
319 PRK14250 phosphate ABC transpo 100.0 1.5E-35 3.3E-40 324.5 24.8 200 166-413 17-220 (241)
320 TIGR01184 ntrCD nitrate transp 100.0 9.1E-36 2E-40 323.8 22.8 198 884-1093 1-199 (230)
321 PRK14250 phosphate ABC transpo 100.0 1E-35 2.2E-40 325.9 23.2 209 856-1094 4-217 (241)
322 TIGR02769 nickel_nikE nickel i 100.0 2.1E-35 4.5E-40 327.9 25.9 206 165-413 24-239 (265)
323 PRK14269 phosphate ABC transpo 100.0 1.7E-35 3.8E-40 325.2 25.0 220 856-1094 3-226 (246)
324 PRK10908 cell division protein 100.0 1.6E-35 3.6E-40 320.4 24.4 195 166-404 16-216 (222)
325 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.8E-34 1E-38 359.9 41.6 211 853-1093 475-695 (710)
326 PRK14242 phosphate transporter 100.0 2.7E-35 5.8E-40 325.2 26.4 207 166-413 20-236 (253)
327 PRK13632 cbiO cobalt transport 100.0 1.4E-35 2.9E-40 330.4 24.2 216 855-1094 7-227 (271)
328 PRK14235 phosphate transporter 100.0 2.3E-35 5E-40 327.8 26.1 216 855-1093 19-246 (267)
329 PRK13633 cobalt transporter AT 100.0 1.3E-35 2.9E-40 331.9 24.2 219 856-1094 5-229 (280)
330 PRK09473 oppD oligopeptide tra 100.0 2.3E-35 5.1E-40 335.7 26.5 224 855-1093 12-246 (330)
331 PRK13645 cbiO cobalt transport 100.0 1.5E-35 3.2E-40 333.2 24.5 219 855-1093 6-235 (289)
332 PRK11124 artP arginine transpo 100.0 1.7E-35 3.8E-40 324.5 24.4 203 166-412 16-228 (242)
333 PRK13639 cbiO cobalt transport 100.0 3.6E-35 7.8E-40 327.6 27.4 204 166-413 16-225 (275)
334 PRK10584 putative ABC transpor 100.0 2.7E-35 5.8E-40 320.1 25.6 197 166-406 24-227 (228)
335 PRK13638 cbiO cobalt transport 100.0 2.8E-35 6.1E-40 328.0 26.4 204 166-413 15-224 (271)
336 PRK14257 phosphate ABC transpo 100.0 2.3E-35 4.9E-40 335.3 26.1 210 166-413 96-312 (329)
337 PRK13640 cbiO cobalt transport 100.0 2.6E-35 5.6E-40 329.7 26.2 208 166-414 21-232 (282)
338 PRK13648 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 329.1 24.9 216 855-1094 7-227 (269)
339 cd03300 ABC_PotA_N PotA is an 100.0 3.3E-35 7.1E-40 320.1 26.2 205 166-413 14-219 (232)
340 PRK15093 antimicrobial peptide 100.0 2.5E-35 5.4E-40 336.4 26.4 217 165-413 20-247 (330)
341 PRK13549 xylose transporter AT 100.0 1.3E-35 2.7E-40 359.5 25.3 219 856-1094 6-228 (506)
342 PRK14247 phosphate ABC transpo 100.0 3.1E-35 6.8E-40 324.1 26.2 212 166-413 17-233 (250)
343 TIGR00968 3a0106s01 sulfate AB 100.0 2.4E-35 5.2E-40 322.1 25.1 213 857-1094 2-216 (237)
344 PRK14257 phosphate ABC transpo 100.0 3E-35 6.4E-40 334.4 26.7 224 854-1095 79-310 (329)
345 PRK13640 cbiO cobalt transport 100.0 1.6E-35 3.4E-40 331.4 23.9 218 855-1094 5-228 (282)
346 TIGR03740 galliderm_ABC gallid 100.0 2.5E-35 5.5E-40 319.2 24.6 196 166-410 14-209 (223)
347 PRK15093 antimicrobial peptide 100.0 2.9E-35 6.3E-40 335.8 26.4 225 856-1093 4-243 (330)
348 PRK10771 thiQ thiamine transpo 100.0 1.6E-35 3.6E-40 322.5 23.2 212 856-1094 2-215 (232)
349 PRK13547 hmuV hemin importer A 100.0 1.7E-35 3.7E-40 328.5 23.8 219 856-1094 2-240 (272)
350 PRK14259 phosphate ABC transpo 100.0 2.2E-35 4.7E-40 328.2 24.6 216 854-1094 12-249 (269)
351 TIGR01193 bacteriocin_ABC ABC- 100.0 2.5E-34 5.5E-39 362.0 37.3 212 853-1093 471-692 (708)
352 PRK14267 phosphate ABC transpo 100.0 3.4E-35 7.5E-40 324.4 25.8 212 166-413 18-236 (253)
353 PRK13645 cbiO cobalt transport 100.0 2.4E-35 5.2E-40 331.5 24.9 205 166-413 25-239 (289)
354 PRK14256 phosphate ABC transpo 100.0 3.9E-35 8.5E-40 323.6 26.1 221 855-1094 4-232 (252)
355 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.1E-35 4.5E-40 317.1 23.2 195 170-407 16-211 (211)
356 TIGR03608 L_ocin_972_ABC putat 100.0 1.8E-35 4E-40 316.3 22.5 189 881-1081 11-206 (206)
357 cd03267 ABC_NatA_like Similar 100.0 3.2E-35 6.9E-40 320.8 24.8 201 879-1091 32-236 (236)
358 COG4181 Predicted ABC-type tra 100.0 1.3E-35 2.8E-40 288.5 19.1 197 879-1088 21-225 (228)
359 COG4525 TauB ABC-type taurine 100.0 1.7E-35 3.8E-40 293.4 20.3 205 165-414 18-224 (259)
360 PRK10575 iron-hydroxamate tran 100.0 2.8E-35 6E-40 327.0 24.5 208 166-412 25-235 (265)
361 TIGR01978 sufC FeS assembly AT 100.0 3.5E-35 7.7E-40 322.4 25.0 212 166-413 14-233 (243)
362 PRK10253 iron-enterobactin tra 100.0 3.1E-35 6.7E-40 326.6 24.8 208 166-413 21-232 (265)
363 TIGR01842 type_I_sec_PrtD type 100.0 1.3E-35 2.8E-40 362.8 23.7 256 78-414 284-542 (544)
364 PRK11144 modC molybdate transp 100.0 1.6E-35 3.5E-40 340.6 23.0 195 170-413 16-217 (352)
365 cd03297 ABC_ModC_molybdenum_tr 100.0 3.1E-35 6.7E-40 316.4 23.7 191 886-1091 16-214 (214)
366 PRK15112 antimicrobial peptide 100.0 2.6E-35 5.6E-40 327.4 23.8 224 856-1094 5-235 (267)
367 cd03225 ABC_cobalt_CbiO_domain 100.0 2E-35 4.2E-40 317.3 22.1 194 165-402 14-211 (211)
368 cd03299 ABC_ModC_like Archeal 100.0 4.8E-35 1E-39 319.3 25.4 204 167-413 14-218 (235)
369 cd03299 ABC_ModC_like Archeal 100.0 4.4E-35 9.5E-40 319.6 25.1 200 883-1094 14-215 (235)
370 PRK10771 thiQ thiamine transpo 100.0 4E-35 8.7E-40 319.5 24.7 201 170-413 17-218 (232)
371 PRK14239 phosphate transporter 100.0 4.6E-35 1E-39 323.2 25.5 216 855-1094 5-232 (252)
372 PRK14237 phosphate transporter 100.0 8.2E-35 1.8E-39 323.4 27.5 210 166-413 34-250 (267)
373 PRK09984 phosphonate/organopho 100.0 3.7E-35 8.1E-40 325.6 24.5 215 166-412 18-240 (262)
374 PRK14270 phosphate ABC transpo 100.0 5.3E-35 1.2E-39 322.4 25.5 215 856-1094 5-231 (251)
375 TIGR00968 3a0106s01 sulfate AB 100.0 6.1E-35 1.3E-39 318.9 25.7 205 166-413 14-219 (237)
376 PRK14235 phosphate transporter 100.0 6.1E-35 1.3E-39 324.4 26.1 208 166-413 33-250 (267)
377 PRK10744 pstB phosphate transp 100.0 6.1E-35 1.3E-39 323.4 25.9 226 113-413 8-243 (260)
378 PRK13642 cbiO cobalt transport 100.0 3.9E-35 8.5E-40 327.6 24.6 216 855-1093 4-224 (277)
379 PRK14258 phosphate ABC transpo 100.0 6.3E-35 1.4E-39 323.3 26.0 222 855-1094 7-241 (261)
380 COG4525 TauB ABC-type taurine 100.0 1.6E-35 3.5E-40 293.7 18.9 201 881-1094 18-220 (259)
381 TIGR01277 thiQ thiamine ABC tr 100.0 4.7E-35 1E-39 314.7 24.0 199 167-408 13-212 (213)
382 PRK14240 phosphate transporter 100.0 6.3E-35 1.4E-39 321.7 25.6 215 855-1093 3-229 (250)
383 PRK15112 antimicrobial peptide 100.0 5.5E-35 1.2E-39 324.8 25.3 207 165-413 26-238 (267)
384 PRK13642 cbiO cobalt transport 100.0 7.8E-35 1.7E-39 325.2 26.6 205 165-413 20-228 (277)
385 PRK11231 fecE iron-dicitrate t 100.0 3.9E-35 8.5E-40 324.1 23.8 207 166-412 16-225 (255)
386 PRK14244 phosphate ABC transpo 100.0 5.8E-35 1.2E-39 322.1 25.1 218 857-1093 7-232 (251)
387 PRK14274 phosphate ABC transpo 100.0 6.2E-35 1.3E-39 323.3 25.5 220 855-1094 12-239 (259)
388 PRK14260 phosphate ABC transpo 100.0 6E-35 1.3E-39 323.3 25.3 217 855-1094 7-239 (259)
389 TIGR02142 modC_ABC molybdenum 100.0 4E-35 8.8E-40 337.8 24.8 194 886-1093 15-216 (354)
390 cd03213 ABCG_EPDR ABCG transpo 100.0 4.2E-35 9.2E-40 310.0 23.0 190 855-1091 3-194 (194)
391 TIGR02770 nickel_nikD nickel i 100.0 3.4E-35 7.4E-40 319.5 22.9 207 167-413 1-214 (230)
392 PRK14262 phosphate ABC transpo 100.0 6.7E-35 1.4E-39 321.5 25.5 218 856-1093 4-229 (250)
393 PRK11144 modC molybdate transp 100.0 4.1E-35 8.8E-40 337.2 24.7 190 886-1093 16-213 (352)
394 PRK11701 phnK phosphonate C-P 100.0 7.3E-35 1.6E-39 322.5 25.8 216 855-1094 6-237 (258)
395 cd03262 ABC_HisP_GlnQ_permease 100.0 2.8E-35 6E-40 316.6 21.8 194 166-403 14-213 (213)
396 TIGR02982 heterocyst_DevA ABC 100.0 4.7E-35 1E-39 316.3 23.6 209 856-1084 2-217 (220)
397 TIGR03873 F420-0_ABC_ATP propo 100.0 5.5E-35 1.2E-39 323.1 24.7 207 166-412 15-224 (256)
398 TIGR02142 modC_ABC molybdenum 100.0 4.2E-35 9.1E-40 337.6 24.6 199 170-413 15-220 (354)
399 cd03235 ABC_Metallic_Cations A 100.0 2.3E-35 5E-40 317.2 20.9 200 165-407 12-213 (213)
400 COG5265 ATM1 ABC-type transpor 100.0 2.8E-36 6.1E-41 330.7 13.9 251 84-414 232-486 (497)
401 PRK11174 cysteine/glutathione 100.0 1.9E-35 4.2E-40 365.1 23.0 210 854-1093 348-567 (588)
402 PRK14241 phosphate transporter 100.0 8.8E-35 1.9E-39 321.9 25.9 211 166-413 18-241 (258)
403 PRK14245 phosphate ABC transpo 100.0 9.3E-35 2E-39 320.3 25.9 209 166-413 17-233 (250)
404 PRK10418 nikD nickel transport 100.0 8.8E-35 1.9E-39 321.0 25.7 214 855-1094 4-226 (254)
405 PRK00635 excinuclease ABC subu 100.0 2.3E-33 4.9E-38 363.5 42.9 134 952-1093 759-901 (1809)
406 TIGR01184 ntrCD nitrate transp 100.0 3.5E-35 7.7E-40 319.2 22.2 202 168-412 1-202 (230)
407 COG0444 DppD ABC-type dipeptid 100.0 7.3E-35 1.6E-39 315.8 24.4 224 856-1093 2-238 (316)
408 PRK14236 phosphate transporter 100.0 1.1E-34 2.4E-39 323.3 26.6 218 853-1094 23-252 (272)
409 TIGR03375 type_I_sec_LssB type 100.0 1.7E-33 3.7E-38 353.8 40.4 212 853-1092 461-682 (694)
410 PRK00349 uvrA excinuclease ABC 100.0 1.1E-33 2.4E-38 354.1 38.3 122 956-1093 792-922 (943)
411 TIGR01846 type_I_sec_HlyB type 100.0 1.2E-33 2.6E-38 354.9 38.8 213 853-1093 453-675 (694)
412 TIGR02770 nickel_nikD nickel i 100.0 5E-35 1.1E-39 318.2 22.8 201 883-1093 1-210 (230)
413 TIGR01846 type_I_sec_HlyB type 100.0 1.9E-35 4.1E-40 371.2 22.3 257 78-414 421-680 (694)
414 PRK14270 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 318.9 26.6 210 166-413 18-234 (251)
415 PRK10762 D-ribose transporter 100.0 5.3E-35 1.2E-39 353.6 25.4 217 856-1094 5-226 (501)
416 PRK10789 putative multidrug tr 100.0 2.3E-35 5E-40 361.9 22.4 256 78-414 280-538 (569)
417 PRK14256 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 319.2 26.4 211 166-413 18-235 (252)
418 PRK11701 phnK phosphonate C-P 100.0 1.3E-34 2.8E-39 320.5 26.1 206 166-413 20-240 (258)
419 PRK14263 phosphate ABC transpo 100.0 1.3E-34 2.9E-39 320.3 26.0 220 854-1094 7-241 (261)
420 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 1.1E-34 2.4E-39 313.8 24.9 192 879-1091 33-224 (224)
421 PRK14253 phosphate ABC transpo 100.0 1.1E-34 2.5E-39 319.4 25.3 220 855-1094 3-229 (249)
422 PRK15056 manganese/iron transp 100.0 7.6E-35 1.6E-39 324.6 24.0 218 855-1094 6-226 (272)
423 PRK14249 phosphate ABC transpo 100.0 1.2E-34 2.7E-39 319.4 25.5 220 855-1094 4-231 (251)
424 PRK14269 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 318.2 25.5 208 166-413 16-229 (246)
425 PRK10418 nikD nickel transport 100.0 1.7E-34 3.7E-39 318.7 26.5 206 166-413 17-229 (254)
426 PRK14239 phosphate transporter 100.0 1.4E-34 3E-39 319.4 25.7 210 166-413 19-235 (252)
427 PRK14272 phosphate ABC transpo 100.0 1.6E-34 3.4E-39 319.0 26.0 217 855-1094 4-232 (252)
428 PRK09700 D-allose transporter 100.0 6E-35 1.3E-39 354.1 24.9 217 856-1094 6-230 (510)
429 PRK14248 phosphate ABC transpo 100.0 1E-34 2.2E-39 323.0 24.7 216 855-1094 21-248 (268)
430 PRK13543 cytochrome c biogenes 100.0 9.1E-35 2E-39 312.5 23.2 201 855-1082 11-211 (214)
431 PRK14275 phosphate ABC transpo 100.0 1.4E-34 3E-39 324.4 25.6 216 855-1094 39-266 (286)
432 PRK14274 phosphate ABC transpo 100.0 1.7E-34 3.7E-39 319.8 26.0 210 166-413 26-242 (259)
433 PRK14262 phosphate ABC transpo 100.0 1.7E-34 3.6E-39 318.3 25.7 210 166-413 17-233 (250)
434 cd03289 ABCC_CFTR2 The CFTR su 100.0 4E-35 8.7E-40 325.0 20.8 210 855-1093 2-220 (275)
435 cd03252 ABCC_Hemolysin The ABC 100.0 2.3E-35 5E-40 322.5 18.6 211 856-1093 1-220 (237)
436 PRK13657 cyclic beta-1,2-gluca 100.0 4.6E-35 9.9E-40 361.4 23.5 207 166-414 349-558 (588)
437 PRK14251 phosphate ABC transpo 100.0 1.6E-34 3.4E-39 318.7 25.2 215 855-1093 4-230 (251)
438 KOG0066 eIF2-interacting prote 100.0 4.8E-34 1E-38 310.6 28.4 202 852-1093 583-786 (807)
439 TIGR02203 MsbA_lipidA lipid A 100.0 2.9E-35 6.2E-40 362.8 21.5 257 78-414 297-556 (571)
440 COG1132 MdlB ABC-type multidru 100.0 1.5E-35 3.3E-40 364.1 18.8 213 852-1093 325-547 (567)
441 PRK14259 phosphate ABC transpo 100.0 1.4E-34 3.1E-39 321.6 24.7 206 166-414 27-253 (269)
442 cd03231 ABC_CcmA_heme_exporter 100.0 6.8E-35 1.5E-39 310.4 21.1 195 857-1081 2-198 (201)
443 PRK14265 phosphate ABC transpo 100.0 2.5E-34 5.4E-39 320.4 26.3 216 854-1094 19-254 (274)
444 TIGR00958 3a01208 Conjugate Tr 100.0 1.5E-33 3.2E-38 353.8 36.5 212 853-1093 476-697 (711)
445 PRK14261 phosphate ABC transpo 100.0 2.1E-34 4.6E-39 318.0 25.4 216 855-1094 6-233 (253)
446 PLN03130 ABC transporter C fam 100.0 4.9E-35 1.1E-39 390.0 24.4 257 78-414 1199-1461(1622)
447 PRK14248 phosphate ABC transpo 100.0 3.8E-34 8.2E-39 318.5 27.5 207 166-413 35-251 (268)
448 COG4181 Predicted ABC-type tra 100.0 6.8E-35 1.5E-39 283.4 18.6 202 160-405 18-226 (228)
449 COG1245 Predicted ATPase, RNas 100.0 9.5E-34 2.1E-38 312.3 30.0 173 884-1082 357-530 (591)
450 PRK14271 phosphate ABC transpo 100.0 2.4E-34 5.2E-39 320.7 25.8 220 855-1094 21-247 (276)
451 PRK10419 nikE nickel transport 100.0 2.1E-34 4.5E-39 320.2 25.2 224 856-1094 4-237 (268)
452 PRK13538 cytochrome c biogenes 100.0 9.8E-35 2.1E-39 310.0 21.7 199 856-1081 2-202 (204)
453 cd03213 ABCG_EPDR ABCG transpo 100.0 1.8E-34 3.8E-39 305.2 23.5 170 165-407 22-194 (194)
454 COG4175 ProV ABC-type proline/ 100.0 3.8E-35 8.2E-40 311.3 18.2 201 881-1093 41-249 (386)
455 PRK14240 phosphate transporter 100.0 2.8E-34 6.1E-39 316.5 25.9 210 166-413 17-233 (250)
456 PRK14255 phosphate ABC transpo 100.0 2.9E-34 6.3E-39 316.8 26.1 216 855-1094 5-232 (252)
457 TIGR01192 chvA glucan exporter 100.0 6.9E-35 1.5E-39 358.3 23.3 256 79-414 300-558 (585)
458 PRK14271 phosphate ABC transpo 100.0 3.3E-34 7.1E-39 319.6 26.6 210 166-413 35-250 (276)
459 PRK13547 hmuV hemin importer A 100.0 2E-34 4.3E-39 320.0 24.7 211 166-412 15-242 (272)
460 TIGR02633 xylG D-xylose ABC tr 100.0 1.7E-34 3.6E-39 349.6 25.9 220 856-1095 2-227 (500)
461 PRK15439 autoinducer 2 ABC tra 100.0 1.4E-34 2.9E-39 350.4 25.0 211 855-1094 11-225 (510)
462 PRK11288 araG L-arabinose tran 100.0 1.5E-34 3.3E-39 349.6 25.4 215 856-1092 5-223 (501)
463 PRK14254 phosphate ABC transpo 100.0 2.9E-34 6.2E-39 321.4 25.7 213 855-1093 39-264 (285)
464 PRK10247 putative ABC transpor 100.0 1.2E-34 2.7E-39 313.9 22.0 210 855-1092 7-221 (225)
465 PRK10790 putative multidrug tr 100.0 7.3E-35 1.6E-39 360.1 23.0 211 853-1093 338-558 (592)
466 PRK14272 phosphate ABC transpo 100.0 4.2E-34 9E-39 315.6 26.4 207 166-413 18-235 (252)
467 PRK14236 phosphate transporter 100.0 4.3E-34 9.3E-39 318.5 26.7 210 166-413 39-255 (272)
468 cd03252 ABCC_Hemolysin The ABC 100.0 1.5E-34 3.2E-39 316.2 22.5 206 165-414 15-225 (237)
469 PRK14249 phosphate ABC transpo 100.0 4.8E-34 1E-38 314.8 26.6 210 166-413 18-234 (251)
470 PRK14238 phosphate transporter 100.0 2.6E-34 5.7E-39 319.9 24.7 216 855-1094 24-251 (271)
471 PRK11176 lipid transporter ATP 100.0 5.1E-35 1.1E-39 361.2 20.8 214 853-1093 339-562 (582)
472 cd03230 ABC_DR_subfamily_A Thi 100.0 1.6E-34 3.4E-39 300.1 21.2 168 857-1084 2-171 (173)
473 PRK14253 phosphate ABC transpo 100.0 3E-34 6.5E-39 316.1 24.7 209 166-412 17-231 (249)
474 PRK14243 phosphate transporter 100.0 2.8E-34 6.1E-39 318.6 24.4 219 855-1094 10-244 (264)
475 PLN03232 ABC transporter C fam 100.0 6.4E-35 1.4E-39 389.1 23.0 257 78-414 1196-1458(1495)
476 PRK14251 phosphate ABC transpo 100.0 4.3E-34 9.2E-39 315.3 25.6 210 166-413 18-234 (251)
477 COG4604 CeuD ABC-type enteroch 100.0 1.4E-35 3.1E-40 294.8 12.2 216 856-1094 2-221 (252)
478 PRK14244 phosphate ABC transpo 100.0 4.5E-34 9.8E-39 315.0 25.6 211 166-413 19-236 (251)
479 PRK14258 phosphate ABC transpo 100.0 5.7E-34 1.2E-38 315.7 26.3 212 166-413 21-244 (261)
480 PRK14275 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 319.3 26.6 203 166-413 53-269 (286)
481 TIGR02323 CP_lyasePhnK phospho 100.0 3.7E-34 8.1E-39 316.1 24.6 215 856-1094 4-234 (253)
482 PRK14261 phosphate ABC transpo 100.0 5.6E-34 1.2E-38 314.6 25.8 210 166-413 20-236 (253)
483 CHL00131 ycf16 sulfate ABC tra 100.0 6E-34 1.3E-38 314.3 25.9 221 855-1094 7-237 (252)
484 PRK10982 galactose/methyl gala 100.0 2.1E-34 4.7E-39 347.7 24.3 205 881-1094 11-219 (491)
485 PRK14255 phosphate ABC transpo 100.0 9.3E-34 2E-38 312.8 27.3 210 166-413 19-235 (252)
486 cd03245 ABCC_bacteriocin_expor 100.0 1.3E-34 2.9E-39 312.9 20.1 209 856-1091 3-220 (220)
487 PRK14260 phosphate ABC transpo 100.0 5.1E-34 1.1E-38 315.8 25.1 210 166-413 21-242 (259)
488 TIGR02323 CP_lyasePhnK phospho 100.0 6.4E-34 1.4E-38 314.2 25.8 206 166-413 17-237 (253)
489 TIGR02203 MsbA_lipidA lipid A 100.0 7.3E-33 1.6E-37 341.5 38.0 212 854-1092 329-550 (571)
490 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.2E-34 4.8E-39 319.1 22.0 198 166-414 18-225 (275)
491 cd03297 ABC_ModC_molybdenum_tr 100.0 3.2E-34 7E-39 308.5 22.6 192 170-407 16-214 (214)
492 TIGR02204 MsbA_rel ABC transpo 100.0 1.2E-34 2.6E-39 357.5 21.9 259 78-414 301-563 (576)
493 PRK03695 vitamin B12-transport 100.0 3.9E-34 8.5E-39 314.5 23.6 198 883-1094 11-218 (248)
494 cd03251 ABCC_MsbA MsbA is an e 100.0 8.6E-35 1.9E-39 317.5 18.1 209 857-1093 2-220 (234)
495 TIGR01166 cbiO cobalt transpor 100.0 2.3E-34 5.1E-39 303.7 20.7 178 881-1068 5-188 (190)
496 PRK10419 nikE nickel transport 100.0 7.1E-34 1.5E-38 315.9 25.7 206 165-413 25-240 (268)
497 COG4987 CydC ABC-type transpor 100.0 4.5E-35 9.8E-40 331.5 16.2 213 855-1094 336-557 (573)
498 PRK14266 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 314.0 24.8 219 856-1094 4-230 (250)
499 COG1123 ATPase components of v 100.0 5.1E-34 1.1E-38 330.7 25.2 210 163-413 302-518 (539)
500 TIGR02982 heterocyst_DevA ABC 100.0 5.8E-34 1.3E-38 307.8 24.1 196 165-403 18-219 (220)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-192 Score=1736.09 Aligned_cols=997 Identities=55% Similarity=0.932 Sum_probs=927.6
Q ss_pred cchHHhhhHHHHhhCCChhhhhhcccccCCCCcccccccCCChHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCC
Q 001293 36 EDDEEALKWAALEKLPTYNRLRKGILTTSRGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP 115 (1106)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (1106)
+||||+|+|||+|||||++| +++.+... .++|+.+++..++..+.++.....++|+++++.++++|++++ ++|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~--~~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~p 84 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFE--SEVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--ELP 84 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhcc--CcccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cCC
Confidence 45999999999999999999 55543211 179999999999999999999999999999999999999998 789
Q ss_pred cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHH
Q 001293 116 KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLL 195 (1106)
Q Consensus 116 ~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL 195 (1106)
.++++++++.+++++..| ||+.|...+.++.++...+.. ++.+.+||+|+||.++||+|++++|||||||||||
T Consensus 85 ~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttll 158 (1391)
T KOG0065|consen 85 TIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTLL 158 (1391)
T ss_pred ceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHHH
Confidence 999999999999998776 999999999999887766543 55667899999999999999999999999999999
Q ss_pred HHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCC
Q 001293 196 LALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1106)
Q Consensus 196 ~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1106)
++|+|.++..+..+|+|+|||++.+++.+++.++|++|+|.|+|+|||||+|.|+++|++++.|++ +..|+|++.
T Consensus 159 kal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~-- 233 (1391)
T KOG0065|consen 159 KALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA-- 233 (1391)
T ss_pred HHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH--
Confidence 999999998877889999999999999999999999999999999999999999999999998877 555555532
Q ss_pred CCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCC
Q 001293 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1106)
Q Consensus 276 ~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD 355 (1106)
.++|++++++||++|+||+|||.++||+||||||||+||++++++++++++||+|+|||
T Consensus 234 ---------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GLD 292 (1391)
T KOG0065|consen 234 ---------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGLD 292 (1391)
T ss_pred ---------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccccccc
Confidence 26899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHh
Q 001293 356 SSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1106)
Q Consensus 356 ~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 435 (1106)
++|+.+|+++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||+++
T Consensus 293 SsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt~ 372 (1391)
T KOG0065|consen 293 SSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLTE 372 (1391)
T ss_pred HHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHH
Q 001293 436 VTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLL 515 (1106)
Q Consensus 436 v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~ 515 (1106)
+++++++.++|.....++.+.++.|+.+.|.+++.+.++..+++.++++.+.++.++..++|.+++|+|+++|+.|++++
T Consensus 373 vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~l 452 (1391)
T KOG0065|consen 373 VTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFLL 452 (1391)
T ss_pred hhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCC
Q 001293 516 MKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFF 595 (1106)
Q Consensus 516 ~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y 595 (1106)
++||.+++++++++.+++++++|++|+++.+ .+..+...+.|++||++++.+|+++++++++++++|||+|||+..||
T Consensus 453 ~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~fY 530 (1391)
T KOG0065|consen 453 MKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSFY 530 (1391)
T ss_pred HhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhccccc
Confidence 9999999999999999999999999999885 55677889999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Q 001293 596 PPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFAL 675 (1106)
Q Consensus 596 ~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~ 675 (1106)
++|+|.++.+++++|+.++++++|.+|+||++||.+++++||++|+++++++++++++|++++++++++.+|+++|++.+
T Consensus 531 ~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~~ 610 (1391)
T KOG0065|consen 531 PPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGILL 610 (1391)
T ss_pred ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCccccc------------cCC---CccccHHHHHhhc
Q 001293 676 LVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKF------------TQD---SSETLGVQVLKSR 740 (1106)
Q Consensus 676 l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~------------~~~---~~~~~g~~~L~~~ 740 (1106)
+++++++||+++..+||+||+|++|++|++|+++++++|||++.+|+|. ... ...+.|..+++.+
T Consensus 611 L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g~ 690 (1391)
T KOG0065|consen 611 LVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSGR 690 (1391)
T ss_pred HHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEecc
Confidence 9999999999999999999999999999999999999999999999997 111 2356788899988
Q ss_pred CCc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCcccccccCCCCCCCCC
Q 001293 741 GFF-----AHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTR 815 (1106)
Q Consensus 741 ~~~-----~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1106)
++. ...+|+|+++|+++||+++|++++.+++.|++|..+.++++..+...........+
T Consensus 691 ~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~---------------- 754 (1391)
T KOG0065|consen 691 DYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAG---------------- 754 (1391)
T ss_pred cccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhcc----------------
Confidence 877 78899999999999999999999999999999998888776555433321110000
Q ss_pred CCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCe
Q 001293 816 SGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGV 895 (1106)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~ 895 (1106)
..... .. ..+..+.+..++++|++|..++++||.|.+|+|-+++.+| +++++|+|||+.++||.
T Consensus 755 ~~~~~-----------~~--~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~ 818 (1391)
T KOG0065|consen 755 SSSEI-----------EK--LDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGV 818 (1391)
T ss_pred ccccc-----------cc--cccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCc
Confidence 00000 00 0011111356788999999999999999999999988887 67889999999999999
Q ss_pred EEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCC
Q 001293 896 LTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVD 975 (1106)
Q Consensus 896 ~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~ 975 (1106)
++||||+||||||||||+|+||+++|+++|+|.|||+|+.+.+|+|.+|||+|+|+|.+.+||+|.|.|+|++|++.+++
T Consensus 819 LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~ 898 (1391)
T KOG0065|consen 819 LTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVS 898 (1391)
T ss_pred eeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCC-CeEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 001293 976 SETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTV 1054 (1106)
Q Consensus 976 ~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p-~illLDEPtsgLD~~~~~~i~~~l~~~~ 1054 (1106)
.+++.++|+++++.+||++++|+++|.|| ++||++|||||+||++|++|| .||||||||||||++++..|++++|+++
T Consensus 899 ~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla 977 (1391)
T KOG0065|consen 899 DEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLA 977 (1391)
T ss_pred HHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 999999999999999999999 8999999999999999999999999999
Q ss_pred hCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCCCCchhccccccC
Q 001293 1055 DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEV 1106 (1106)
Q Consensus 1055 ~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g~~~~~~~~yf~~ 1106 (1106)
++|+|||||+||||.++||.||++++|++||++||+||+|+||++||+|||+
T Consensus 978 ~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes 1029 (1391)
T KOG0065|consen 978 DTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFES 1029 (1391)
T ss_pred hcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999984
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.2e-176 Score=1711.89 Aligned_cols=1084 Identities=62% Similarity=1.024 Sum_probs=944.3
Q ss_pred cccccCCCCccccC---C----CCcchHHhhhHHHHhhCCChhhhhhcccccC-----CCC---cccccccCCChHhhHH
Q 001293 19 SRWNTNSIGAFSRS---S----REEDDEEALKWAALEKLPTYNRLRKGILTTS-----RGE---ANEVDVYNLGLQERQR 83 (1106)
Q Consensus 19 ~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~ 83 (1106)
++|.. +++|++. . ..|||||+|+|||+||||||+|+|++++.+. .|+ ..|+|+++|+.++++.
T Consensus 19 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (1470)
T PLN03140 19 SSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQK 96 (1470)
T ss_pred hhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHH
Confidence 34643 6888542 1 2578999999999999999999999999652 122 2369999999999999
Q ss_pred HHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccc
Q 001293 84 LIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKR 163 (1106)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 163 (1106)
+++|++++.++|+++|++++++|.+++|+++|+++|+|+||+|++++.++++.+||++|.+.+.++.+.+.++...+++.
T Consensus 97 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~ 176 (1470)
T PLN03140 97 FIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKT 176 (1470)
T ss_pred HHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888765554344556
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCH
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1106)
+++||+|||+.++|||+++|+|||||||||||++|+|+++|+.+++|+|+|||+++++..+++.++||+|+|.|++++||
T Consensus 177 ~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV 256 (1470)
T PLN03140 177 KLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTV 256 (1470)
T ss_pred cceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcH
Confidence 78899999999999999999999999999999999999998777899999999998877667889999999999999999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+|||.|+++|++.+.++++..+..+++++.++.|+.++|.+|++.+.++.+.+..++++|+.+||++|+||.||++++++
T Consensus 257 ~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rg 336 (1470)
T PLN03140 257 KETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRG 336 (1470)
T ss_pred HHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccC
Confidence 99999999998776666655566677777788888899999999998888888899999999999999999999999999
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|++
T Consensus 337 lSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~i 416 (1470)
T PLN03140 337 ISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQI 416 (1470)
T ss_pred CCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceE
Confidence 99999999999999999999999999999999999999999999998766789999999999999999999999999999
Q ss_pred EEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCcc
Q 001293 404 VYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFD 483 (1106)
Q Consensus 404 v~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (1106)
+|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|++++.++.+.+++..+.+
T Consensus 417 vy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 496 (1470)
T PLN03140 417 VYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFD 496 (1470)
T ss_pred EEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999988888887766777888999999999999998888888777766
Q ss_pred ccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHHHH
Q 001293 484 KSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFF 563 (1106)
Q Consensus 484 ~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff 563 (1106)
+++.++.....++|..++++|+++|++|++++++||++++++|+++.+++|+++|++|++++++..+..++..+.|++||
T Consensus 497 ~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff 576 (1470)
T PLN03140 497 KSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLF 576 (1470)
T ss_pred hhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHH
Confidence 66556666666789999999999999999999999999999999999999999999999987765555667788999999
Q ss_pred HHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHHHH
Q 001293 564 AITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALL 643 (1106)
Q Consensus 564 ~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~ 643 (1106)
++++.+++++++++.++.++|+|+|||+.+||++|+|++++++.++|+.++++++|++|+|||+||++++++||.|++++
T Consensus 577 ~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~ 656 (1470)
T PLN03140 577 SMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLV 656 (1470)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCcccc
Q 001293 644 LGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKK 723 (1106)
Q Consensus 644 ~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~ 723 (1106)
++++++++++|++++++++++.+|+++++++++++++|+||++++++||+||+|++|+||++|+++|+++|||.+..|.+
T Consensus 657 ~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~ 736 (1470)
T PLN03140 657 FLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMN 736 (1470)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988864
Q ss_pred c-cCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCccc
Q 001293 724 F-TQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQ 802 (1106)
Q Consensus 724 ~-~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 802 (1106)
. +.....+.|.++|+.+|+...+.|+|++++++++|+++|+++++++++|.++....++++..+...............
T Consensus 737 ~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 816 (1470)
T PLN03140 737 KMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRS 816 (1470)
T ss_pred cccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhccccccccc
Confidence 3 223356789999999999999999999999999999999999999999999776665554322111000000000000
Q ss_pred ccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccCceE
Q 001293 803 LSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLV 882 (1106)
Q Consensus 803 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~ 882 (1106)
................+.. ....... .............++++.+|+.|.+++|+||+|.|++|..++..+...+++.
T Consensus 817 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~ 894 (1470)
T PLN03140 817 LSSADGNNTREVAIQRMSN-PEGLSKN-RDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQ 894 (1470)
T ss_pred ccccccccccccccccccc-ccccccc-cccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCce
Confidence 0000000000000000000 0000000 0000000001223456778999999999999999998876654555556678
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCCCCCCHHHHH
Q 001293 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESL 962 (1106)
Q Consensus 883 ~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l 962 (1106)
+|+|||++++||+++||+|||||||||||++|+|+.++|+.+|+|.++|.+..+..+++.+|||+|+|.+++.+||+|+|
T Consensus 895 iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L 974 (1470)
T PLN03140 895 LLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESL 974 (1470)
T ss_pred EeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHH
Confidence 99999999999999999999999999999999999877778999999999876556778899999999999999999999
Q ss_pred HHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHH
Q 001293 963 LFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1042 (1106)
Q Consensus 963 ~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~ 1042 (1106)
.|++.+|.+...+.+++++.++++++.++|.++.++.+|.+++++|||||||||+||++|+.+|+||||||||+|||+.+
T Consensus 975 ~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~ 1054 (1470)
T PLN03140 975 IYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1054 (1470)
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Confidence 99988876655566666778999999999999999999988888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCCCCchhccccccC
Q 001293 1043 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEV 1106 (1106)
Q Consensus 1043 ~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g~~~~~~~~yf~~ 1106 (1106)
+..|++.|++++++|+|||||+|||+.++++.||++++|++||+++|+|+.|+||+++++|||+
T Consensus 1055 a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~ 1118 (1470)
T PLN03140 1055 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEA 1118 (1470)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHh
Confidence 9999999999998899999999999977899999999999999999999999999999999984
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=9.6e-137 Score=1348.10 Aligned_cols=951 Identities=33% Similarity=0.543 Sum_probs=767.7
Q ss_pred cchHHHHHHHHHHHhhcCCCCC--cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeece
Q 001293 94 VDNERFLLKLKNRIDRVGIDLP--KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDV 171 (1106)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 171 (1106)
.|++++++.++++.++.+...| +++|+|+||+|++ ...+....||+.|.+.+.+..+...+. ..+++.+++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4566777665555555555555 9999999999999 445666789999998887765443331 12344567899999
Q ss_pred eEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCccCCCCc--ccceEEEEcCCCCCCCCCCHHHHHH
Q 001293 172 SGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETLA 248 (1106)
Q Consensus 172 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1106)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||.++.+.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974211 24999999999875432 2456999999999999999999999
Q ss_pred HHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhh
Q 001293 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1106)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1106)
|+++++.+..+.... .+.+ ..+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDGV---SREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCCC---CHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 998876432110000 0000 01123567899999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcC
Q 001293 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1106)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1106)
||||+||++|+.+|+++||||||+|||+.++..+++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999875678999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCcccc---
Q 001293 409 RELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKS--- 485 (1106)
Q Consensus 409 ~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 485 (1106)
++++.+||+++||.||++.++|||+.+++++.+ ++++...+. ....+.++++++|++++.++.+.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~-~~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAE-RQIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhh-hhccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 999999999999999999999999999998754 232221111 123578899999999887776665544321110
Q ss_pred ------------ccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCccccc
Q 001293 486 ------------KSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTD 553 (1106)
Q Consensus 486 ------------~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~ 553 (1106)
...+......+|..++|+|+++|++|+++.++||+..++.++++.+++|+++|++|++.+.+. .+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~---~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNT---SD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCc---hh
Confidence 000111233468899999999999999999999999999999999999999999999776432 34
Q ss_pred chhhhHHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccch
Q 001293 554 GGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNA 633 (1106)
Q Consensus 554 ~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 633 (1106)
.+.+.|++||++++.+|.++.+++.++.+|++|+|||..++|++++|++|+.+.++|+.++.+++|++++|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHH
Q 001293 634 GRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVA 713 (1106)
Q Consensus 634 ~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 713 (1106)
++||.++++++++..++.+++++++++++++.+|+.+++++++++++|+||+++.++||+||+|++|+||+.|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcccccc--C----------------------CCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHH
Q 001293 714 NEFLGHSWKKFT--Q----------------------DSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTL 769 (1106)
Q Consensus 714 nef~~~~~~~~~--~----------------------~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l 769 (1106)
|||.+..+.|.. | +.....|.++|+. ++.....|.|.+++++++|+++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887731 1 1124578899985 34445678999999999999999999999
Q ss_pred HHHhcCCCCCCccceeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCccc
Q 001293 770 ALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVL 849 (1106)
Q Consensus 770 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (1106)
++.|.++......++................ .. ......++..... ......+... .......
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~~~~~~e~~~~~~-----~~~~~~~~~~-~~~~~~~ 751 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGET----------SA-SNKNDIEAGEVLG-----STDLTDESDD-VNDEKDM 751 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccc----------cc-cccccccccccCC-----CCcccccccc-ccccccc
Confidence 9999886544333322111000000000000 00 0000000000000 0000000000 0000001
Q ss_pred CC--CCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeeeE
Q 001293 850 PF--EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGN 926 (1106)
Q Consensus 850 p~--~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~ 926 (1106)
|. ....++|+||+|.++.+ .+++.+|+|||++++||+++||+|||||||||||++|+|+.++| +.+|+
T Consensus 752 ~~~~~~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~ 822 (1394)
T TIGR00956 752 EKESGEDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGD 822 (1394)
T ss_pred cccCCCceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeE
Confidence 11 12247899999987532 13457999999999999999999999999999999999987644 45699
Q ss_pred EEEcCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 927 ITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 927 i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
|.+||.+... .+++.+|||+|++.+.+.+||+|++.|++.++.+...+.+++++.++++++.++|.++.|+.+|.++.
T Consensus 823 I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~- 900 (1394)
T TIGR00956 823 RLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE- 900 (1394)
T ss_pred EEECCEECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-
Confidence 9999998753 46788999999999999999999999999887655556666777899999999999999999887653
Q ss_pred CCCHHHHHHHHHHHHHhcCCC-eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1007 GLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~-illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
+|||||||||+||+||+.+|+ ||||||||+|||+.++..|++.|++++++|+|||||+|||+..+++.||++++|++||
T Consensus 901 ~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 901 GLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 899999999999999999997 9999999999999999999999999988899999999999976788999999999999
Q ss_pred EEEEecCCCCCchhccccccC
Q 001293 1086 QEIYVGPLGRHSCHLISYFEV 1106 (1106)
Q Consensus 1086 ~~~~~g~~g~~~~~~~~yf~~ 1106 (1106)
+++|+|+.|++|+++++||++
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~ 1001 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEK 1001 (1394)
T ss_pred EEEEECCcccccchHHHHHHh
Confidence 999999999999999999974
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-84 Score=787.78 Aligned_cols=583 Identities=30% Similarity=0.497 Sum_probs=493.5
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHH
Q 001293 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1106)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1106)
...++++|+|+++++... .+..+++|+||||.++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 357889999999998542 114577999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhc
Q 001293 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1106)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1106)
||++|+|+.+....++|+|++||++.+....++.+|||.|+|.+++++||+|+|.|+++++.+.. .
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~------- 137 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------L------- 137 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------C-------
Confidence 99999999987667899999999887776678899999999999999999999999999875432 0
Q ss_pred CCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCC
Q 001293 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1106)
Q Consensus 274 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1106)
..++.+.+++.+++.|||.+|+||+||+...|||||||||||+||..|+.||+||||||||||
T Consensus 138 -----------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 138 -----------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 112345679999999999999999999998899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHH
Q 001293 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1106)
Q Consensus 354 LD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1106)
||+.++.++++.|+++|+. ++|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||+..||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999985 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCch--hhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHH
Q 001293 434 QEVTSRK--DQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISR 511 (1106)
Q Consensus 434 ~~v~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R 511 (1106)
.++.+.. .+..... .........++......+............ .........++|.|+..+++|
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKSLSTS-----KKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhhcccc-----cccccccCCcHHHHHHHHHHH
Confidence 9988743 1110000 000011111110000000000000000000 000111167999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHHHHHHHHHHHhHHH-HHHHHhhhhhhHHHhh
Q 001293 512 ELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFS-EISMTIAKLPVFYKQR 590 (1106)
Q Consensus 512 ~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~l~~~~~~~~vf~rer 590 (1106)
.+..++|++.++..|++|.+++++++|++||+.+..... .....|++||.+.+..|..+. .++.+..++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~---~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKG---IQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHH---HHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 999999999999999999999999999999987544332 235678888888888776665 6889999999999999
Q ss_pred hCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHH
Q 001293 591 DFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTF 670 (1106)
Q Consensus 591 ~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~ 670 (1106)
.+++|+.++|++++.+.++|+.++.+++|++++|||+|++++..+|+.++++.++..+++.+++.++++..++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCccccccC--CCccccHHHHHhhcCCccccch
Q 001293 671 GSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQ--DSSETLGVQVLKSRGFFAHEYW 748 (1106)
Q Consensus 671 ~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~L~~~~~~~~~~~ 748 (1106)
++++++.+++++||+++.++||.||+|+.|+|+++|++++++.|+|.+....|... ..+...|.++++..++... .
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~ 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDS--S 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCccc--c
Confidence 99999999999999999999999999999999999999999999999743344332 3456788999998887654 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001293 749 YWLGLGALFGFVLLLNFAYTLALTFLD 775 (1106)
Q Consensus 749 ~w~~~~~l~~~~~~~~~~~~l~l~~~~ 775 (1106)
.|.++.++++++++|++++++++++..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 688999999999999999999998864
No 5
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=6.5e-83 Score=783.74 Aligned_cols=609 Identities=21% Similarity=0.324 Sum_probs=471.6
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHH
Q 001293 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1106)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1106)
.++++++|.|++|.+.......+... +...+..-. .......+..++++|+|||++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~-~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKP-KISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCcccccc----ccccccccc-ccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 45799999999999754210111100 000000000 0000011223467999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhc
Q 001293 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1106)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1106)
||++|+|+++|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.+... .
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------~------ 174 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------T------ 174 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC-------C------
Confidence 999999998874 3589999999987532 245699999999999999999999998765422110 0
Q ss_pred CCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCC
Q 001293 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1106)
Q Consensus 274 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1106)
.++....++++++.+||++++||.||++..++|||||||||+||++|+.+|+||||||||+|
T Consensus 175 ------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 175 ------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 00112346789999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHH
Q 001293 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1106)
Q Consensus 354 LD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1106)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+++++.+||+++||.||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999876 5789999888888889999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcC---Cccccc-----cccc-cccccccCCcHHHH
Q 001293 434 QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT---PFDKSK-----SHRA-ALTTETYGVGKREL 504 (1106)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~-~l~~~~~~~s~~~~ 504 (1106)
.++++...+.......+.+ ...+++.+.|++... ....+.... .....+ ..+. ......+..++|+|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000000 112333444432111 111111000 000000 0000 00112345689999
Q ss_pred HHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHHHHHHHHHHH-hHHHHHHHHhhhh
Q 001293 505 LKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNF-NGFSEISMTIAKL 583 (1106)
Q Consensus 505 ~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~l~~~~~~~ 583 (1106)
+.++++|.++. +|+..+...|+++.+++|+++|++|++.+ ..+.+...|++||++++.++ ..++.++.+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999653 23456778999999877655 5567888888999
Q ss_pred hhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 001293 584 PVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRN 663 (1106)
Q Consensus 584 ~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~ 663 (1106)
++|+|||.+++|++++|++|+++.++|+.++.+++|++++|||+|+.+++++||.|+++++++..++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCcc-----ccccCCCccccHHHHHh
Q 001293 664 MVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW-----KKFTQDSSETLGVQVLK 738 (1106)
Q Consensus 664 ~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~-----~~~~~~~~~~~g~~~L~ 738 (1106)
+.+|+++++++++++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+. .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976542 33221110011111222
Q ss_pred hcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001293 739 SRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLD 775 (1106)
Q Consensus 739 ~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~ 775 (1106)
...+. ....|.+++++++++++|+++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 235788999999999999999999998654
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=4.1e-83 Score=786.94 Aligned_cols=569 Identities=25% Similarity=0.415 Sum_probs=482.0
Q ss_pred cccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCC
Q 001293 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1106)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.++....+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44577999999999999999999999999999999999998875456899999999876544567899999999999999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc-
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM- 320 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1106)
||+|||.|+++++.+.... .++....++.+++.+||++++||.||+..
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998876432100 01122357889999999999999999864
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
.++|||||||||+||++|+.+|+++||||||+|||+.++..+++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 689999999999999999999999999999999999999999999999876 5789999999999999999999999999
Q ss_pred CeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcC
Q 001293 401 GQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT 480 (1106)
Q Consensus 401 G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 480 (1106)
|+++|+|+++++.+||+++||+||+..+|+||+.++.+....... . .....+++.+.|+.+...++.......
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998875322110 0 111234566666665554443332221
Q ss_pred Cccccc---cccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhh
Q 001293 481 PFDKSK---SHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1106)
Q Consensus 481 ~~~~~~---~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~ 557 (1106)
...... ..........+..+++.|+..+++|.++..+||+.++..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111000 00001122356789999999999999999999999999999999999999999999765433 344556
Q ss_pred hHHHHHHHHHHHHhHH-HHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHH
Q 001293 558 AGATFFAITMVNFNGF-SEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRF 636 (1106)
Q Consensus 558 ~g~lff~~~~~~~~~~-~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 636 (1106)
.|++|+.+++..|.++ ..++.+..++++|+||+..++|++++|++++.+.++|+.++.+++|++++|||+|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889999888877764 456777789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhh
Q 001293 637 FKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEF 716 (1106)
Q Consensus 637 ~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef 716 (1106)
|.++++++++..++.+++.++++++++..+|..+++++++++++|+||+++.++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-ccccCC---CccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001293 717 LGHSW-KKFTQD---SSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFL 774 (1106)
Q Consensus 717 ~~~~~-~~~~~~---~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~ 774 (1106)
.+..+ .|...+ .+...|.++|+.+|+... +.|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 343211 133468999999998654 458899999999999999999999874
No 7
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.7e-81 Score=817.12 Aligned_cols=595 Identities=22% Similarity=0.377 Sum_probs=498.8
Q ss_pred CCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCc
Q 001293 111 GIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSG 190 (1106)
Q Consensus 111 ~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsG 190 (1106)
.++...+.+.|+||+|+++...+.+. ...++.++.+|+|||+.++||++++|+||||||
T Consensus 860 ~~~~~~~~~~~~~v~y~v~~~~~~~~---------------------~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaG 918 (1470)
T PLN03140 860 VLPFTPLAMSFDDVNYFVDMPAEMKE---------------------QGVTEDRLQLLREVTGAFRPGVLTALMGVSGAG 918 (1470)
T ss_pred ccCCCcceEEEEEEEEEEccCccccc---------------------cccCcCCceEeeCcEEEEECCeEEEEECCCCCC
Confidence 34556678999999999864321100 011223457999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHH
Q 001293 191 KTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARRE 270 (1106)
Q Consensus 191 KSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~ 270 (1106)
|||||++|+|+.++. ..+|+|.+||++..+...++.+|||+|+|.|++.+||+|||.|++.++.+... .
T Consensus 919 KTTLL~~LaG~~~~g-~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~-------~--- 987 (1470)
T PLN03140 919 KTTLMDVLAGRKTGG-YIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEV-------S--- 987 (1470)
T ss_pred HHHHHHHHcCCCCCC-cccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCC-------C---
Confidence 999999999997642 35899999998875444457799999999999999999999998765421110 0
Q ss_pred HhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCccceeecC
Q 001293 271 KAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEI 350 (1106)
Q Consensus 271 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEp 350 (1106)
.++....++++++.+||.+++|+.||+..+++|||||||||+||++|+.+|++||||||
T Consensus 988 ---------------------~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEP 1046 (1470)
T PLN03140 988 ---------------------KEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEP 1046 (1470)
T ss_pred ---------------------HHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCC
Confidence 00112357889999999999999999888889999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC-CeEEEEcCh----HHHHHHHHhC-CC-CC
Q 001293 351 STGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD-GQIVYQGPR----ELVLEFFASM-GF-RC 423 (1106)
Q Consensus 351 tsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~~ 423 (1106)
|||||+.++..+++.|++++. .++|+|+++|||..++++.||++++|++ |+++|+||. +++.+||+++ |+ +|
T Consensus 1047 TsgLD~~~a~~v~~~L~~l~~-~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~ 1125 (1470)
T PLN03140 1047 TSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKI 1125 (1470)
T ss_pred CCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCC
Confidence 999999999999999999876 5789999999998889999999999996 899999996 6899999998 66 49
Q ss_pred CCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhc---CCccccccccccccccccCCc
Q 001293 424 PKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR---TPFDKSKSHRAALTTETYGVG 500 (1106)
Q Consensus 424 p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~s 500 (1106)
|+..|||||+.++++..... ....++++.|+.++..+...+++. .+.... +......+|..+
T Consensus 1126 p~~~NPAd~~l~v~~~~~~~------------~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s 1190 (1470)
T PLN03140 1126 KEKYNPATWMLEVSSLAAEV------------KLGIDFAEHYKSSSLYQRNKALVKELSTPPPGA---SDLYFATQYSQS 1190 (1470)
T ss_pred CCCCCchhhhhhhhcccccc------------cccchHHHHHhccHHHHHHHHHHHHhccCCCCc---cccccCccccCC
Confidence 99999999999998643211 112367788888776665544332 221111 111123568899
Q ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHHHHHHHHHHHhHH-HHHHHH
Q 001293 501 KRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGF-SEISMT 579 (1106)
Q Consensus 501 ~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~-~~l~~~ 579 (1106)
+|.|+++|++|+++..+||+.++..|+++.+++|+++|++||+.+.+..+..+.+...|++|+++++..++.. +.++.+
T Consensus 1191 ~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~ 1270 (1470)
T PLN03140 1191 TWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMV 1270 (1470)
T ss_pred HHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998876555556666678999998888777655 445777
Q ss_pred hhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001293 580 IAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAV 659 (1106)
Q Consensus 580 ~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~ 659 (1106)
..+|++|+|||.+++|++++|++++++.++|+.++.+++|.+++|||+||.++++.||.++++++++..++.+++.++++
T Consensus 1271 ~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a 1350 (1470)
T PLN03140 1271 AVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVS 1350 (1470)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCccccccCCC-ccccHHHH-H
Q 001293 660 TGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDS-SETLGVQV-L 737 (1106)
Q Consensus 660 ~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~-~~~~g~~~-L 737 (1106)
++|+..+|..++++++.++++|+||++++++||.||+|+||+||+.|++++++.|||.+....+.+++. ....+.++ +
T Consensus 1351 ~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 1430 (1470)
T PLN03140 1351 LTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQ 1430 (1470)
T ss_pred HCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988776655431 12345555 5
Q ss_pred hhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 001293 738 KSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDP 776 (1106)
Q Consensus 738 ~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~ 776 (1106)
..+|+. ..|.|.+++++++|+++|.+++++++++++.
T Consensus 1431 ~~~g~~--~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1467 (1470)
T PLN03140 1431 DHYGYD--PDFMGPVAAVLVGFTVFFAFIFAFCIRTLNF 1467 (1470)
T ss_pred HhcCcC--cccccchhhhHHHHHHHHHHHHHHHHHHhhc
Confidence 667775 4467889999999999999999999999875
No 8
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-80 Score=762.87 Aligned_cols=843 Identities=21% Similarity=0.272 Sum_probs=463.0
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHH-hhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRI-DRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1106)
...++....+++++++..+. +...- ...-..-...+|+|+|+++++.
T Consensus 314 f~~a~~aa~~I~~~i~~~~~-----i~~~~~~~~~~~~~~g~ief~nV~FsYP--------------------------- 361 (1228)
T KOG0055|consen 314 FAKARAAAYRIFETIDRKPS-----IDPYSKGGRVLSSIKGEIEFRNVCFSYP--------------------------- 361 (1228)
T ss_pred HhccccchHHHHHHhcCCCC-----CCcccccCCcccccccceEEEEEEecCC---------------------------
Confidence 56777888888988887765 22111 1112233578999999999973
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcC
Q 001293 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1106)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1106)
+| ++..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|+++|.++.++.. +.++|.|+|
T Consensus 362 ---sR-pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Q 434 (1228)
T KOG0055|consen 362 ---SR-PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQ 434 (1228)
T ss_pred ---CC-CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeee
Confidence 23 2567999999999999999999999999999999999999999 9999999999988765 478999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 001293 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1106)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
+|.+| ..||+|||.|+. ++...+...++++...+ .+ -+..|++.+|
T Consensus 435 ePvlF-~~tI~eNI~~G~----~dat~~~i~~a~k~ana--------------------------~~---fi~~lp~g~~ 480 (1228)
T KOG0055|consen 435 EPVLF-ATTIRENIRYGK----PDATREEIEEAAKAANA--------------------------HD---FILKLPDGYD 480 (1228)
T ss_pred chhhh-cccHHHHHhcCC----CcccHHHHHHHHHHccH--------------------------HH---HHHhhHHhhc
Confidence 99555 579999999974 22223333344333211 11 1445889999
Q ss_pred cccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001293 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1106)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1106)
|.||++++. ||||||||++|||||+.+|+|||||||||+||+.+...+.+.|++.. .++|+|+.. | +..+.+.+|
T Consensus 481 T~vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTivVa-H-RLStIrnaD 555 (1228)
T KOG0055|consen 481 TLVGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIVVA-H-RLSTIRNAD 555 (1228)
T ss_pred ccccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEEEe-e-ehhhhhccC
Confidence 999998874 99999999999999999999999999999999999999999998864 456666643 3 445667799
Q ss_pred eEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCCCh-hHHH--HhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhch-
Q 001293 394 DIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGV-ADFL--QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH- 469 (1106)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~-ad~l--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 469 (1106)
+|++|++|+|++.|+++|++.. .+. ++.+ |+....++. ..+. .. ...+.....+.+.
T Consensus 556 ~I~v~~~G~IvE~G~h~ELi~~-----------~G~Y~~lv~~Q~~~~~~~~-~~~~---~~----~~~~~~~s~~~s~~ 616 (1228)
T KOG0055|consen 556 KIAVMEEGKIVEQGTHDELIAL-----------GGIYSSLVRLQELEKAAED-EEEE---ES----LKEERSRSLKSSSS 616 (1228)
T ss_pred EEEEEECCEEEEecCHHHHHhc-----------cchHHHHHHHHhhhhhhhc-cccc---cc----hhhhhhhccccccc
Confidence 9999999999999999999762 011 1111 222211110 0000 00 0000000000000
Q ss_pred ---hhhh-hhhhh--cCCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH-------HHHH
Q 001293 470 ---VGQK-ISDEL--RTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAF-------VAVV 536 (1106)
Q Consensus 470 ---~~~~-~~~~~--~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~-------~~li 536 (1106)
..+. ..... ..+.++ ...... .......+++ |-+...+.++.+.+.-.+..++ .+++
T Consensus 617 ~~~~~~~~~~~~~~~~~~~~e-~~~~~~-~~~~~~~s~~--------~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~ 686 (1228)
T KOG0055|consen 617 SPSLSRGSNRSNLLSVKPEGE-DPEEPV-SEEDEKVSFW--------RIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYV 686 (1228)
T ss_pred cccccCCcccccccccccccc-cccccc-ccccccccHH--------HHHHhccchhHHHHHHHHHHHHhhhhHHHHHHH
Confidence 0000 00000 000000 000000 0111222333 3344444555554443333332 2333
Q ss_pred HHHHHhccc-CCCcccccchhhhHHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHH
Q 001293 537 YMTLFLRTK-MHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLE 615 (1106)
Q Consensus 537 ~gt~f~~~~-~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~ 615 (1106)
++.++--.. .+.+..........++|.++....+ +..+++.. .+++.--.+..++-..
T Consensus 687 ~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~-----i~~~~q~~-------------~f~~~ge~Lt~R~R~~--- 745 (1228)
T KOG0055|consen 687 FSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSG-----ITNFLQHY-------------FFGIAGEKLTKRLRSM--- 745 (1228)
T ss_pred HHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHH-------------HHHHHHHHHHHHHHHH---
Confidence 332221111 1111111111123333333322111 11111000 0000001111111111
Q ss_pred HHHHHHHhhhcccCccc---hHHHHHHHHHHH-----HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccC
Q 001293 616 VAVWVFLSYYVVGYDSN---AGRFFKQYALLL-----GVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILS 687 (1106)
Q Consensus 616 ~~i~~~i~Y~~~g~~~~---~~~f~~~~l~~~-----~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~ 687 (1106)
.|-.+.+.=+++-.+ .++....+.... ++..-.+.+...++++.-.+.+|..++|-+.++.+.+..+++-
T Consensus 746 --~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~ 823 (1228)
T KOG0055|consen 746 --MFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLIL 823 (1228)
T ss_pred --HHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122222222222111 122222222111 1112222333444444445556666555444333332211110
Q ss_pred cCChhhHHHHHHhhcH---HHHHHHHHHHHhhcCCccccccCCCccccHHHHHhhcCC-------ccccchhHHHHHHHH
Q 001293 688 REDIKKWWKWAYWCSP---LTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGF-------FAHEYWYWLGLGALF 757 (1106)
Q Consensus 688 ~~~ip~~~~W~~~isp---~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~-------~~~~~~~w~~~~~l~ 757 (1106)
...+. -+++.-.+. -.|.-.+-+++|-..+-... ........++..+.- .......|.+++.-+
T Consensus 824 ~~~~~--~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV----~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~ 897 (1228)
T KOG0055|consen 824 SGYLQ--KKFLKGFSKDDKKAYEEASKIAIEAVSNIRTV----AALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGF 897 (1228)
T ss_pred HHHHH--HHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 000000000 00111111111111100000 000001111111100 000112333433333
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhh
Q 001293 758 GFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEA 837 (1106)
Q Consensus 758 ~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (1106)
...++| +.+.++++|-..+-......++.....- .+..+++..........|.-..............+.
T Consensus 898 sqs~~~-~~~A~~f~~G~~Li~~g~~~~~~~~~vf---------~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr 967 (1228)
T KOG0055|consen 898 SQSLLF-FVYALSFWYGARLISNGEMTFEDVFRVF---------MALSFTAMALGQASSYAPDISKAKIAAGSIFEILDR 967 (1228)
T ss_pred HHHHHH-HHHHHHHHHhHHHHhcCCcCHHHHHHHH---------HHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcC
Confidence 332222 2344444443221111111000000000 000000000000000011100000000000000000
Q ss_pred h--ccCCccCCcccCCCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHh
Q 001293 838 E--ASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 915 (1106)
Q Consensus 838 ~--~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~ 915 (1106)
. .+.....+...|...+.++|+||.|.||..| +.++|+|+|+++++|+.+||||||||||||.+.+|-
T Consensus 968 ~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLe 1037 (1228)
T KOG0055|consen 968 KPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLE 1037 (1228)
T ss_pred CCCCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHH
Confidence 0 1111123333455677899999999999764 467999999999999999999999999999999998
Q ss_pred CCCCCCeeeeEEEEcCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCC
Q 001293 916 GRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVEL 992 (1106)
Q Consensus 916 g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l 992 (1106)
+.. .+..|.|.|||.+++. ..+|+++|.|.|+|.++. -|++||+.|+. .+++.+ .+.++++..+.
T Consensus 1038 RfY--dp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~----eIi~Aak~ANa 1105 (1228)
T KOG0055|consen 1038 RFY--DPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEE----EIIEAAKLANA 1105 (1228)
T ss_pred Hhc--CCCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHH----HHHHHHHHhhh
Confidence 644 4679999999999765 457889999999999875 69999999981 113322 24555555443
Q ss_pred -------ccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEec
Q 001293 993 -------NPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1065 (1106)
Q Consensus 993 -------~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 1065 (1106)
.+-.|+.+|..| .+||||||||++||||+++||+||+|||+||+||.++.+.|+++|++.. .|||.|+++|
T Consensus 1106 H~FI~sLP~GyDT~vGerG-~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAH 1183 (1228)
T KOG0055|consen 1106 HNFISSLPQGYDTRVGERG-VQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAH 1183 (1228)
T ss_pred HHHHhcCcCcccCccCccc-CcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEec
Confidence 334566777666 4799999999999999999999999999999999999999999999875 5899999999
Q ss_pred CccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1066 QPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1066 ~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
++| ....+|.|.|+++ |++++.|.-
T Consensus 1184 RLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1184 RLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred chh--hhhcCCEEEEEEC-CEEEecccH
Confidence 997 5788999999986 699999973
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.1e-78 Score=737.42 Aligned_cols=561 Identities=23% Similarity=0.360 Sum_probs=473.0
Q ss_pred cccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCC
Q 001293 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1106)
..++.+|+||+|.++||.+|||||+|||||||||++|||+... +.++|+|++||.+.++...+|.+|||.|+|.|.+++
T Consensus 801 G~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~-G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~ 879 (1391)
T KOG0065|consen 801 GGTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTG-GYIEGDILISGFPKDQETFARVSGYVEQQDIHSPEL 879 (1391)
T ss_pred ccceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCccc-ceEEeEEEECCeeCchhhhccccceeecccccCccc
Confidence 3567899999999999999999999999999999999999865 478999999999998777889999999999999999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||||.|.|+|.++.+... ..++....+|++++.|+|++++|.+||..+
T Consensus 880 TVrESL~fSA~LRlp~~v-------------------------------~~~ek~~yVe~Vi~lleL~~~~daiVG~~G- 927 (1391)
T KOG0065|consen 880 TVRESLRFSAALRLPKEV-------------------------------SDEEKYEYVEEVIELLELKEYADALVGLPG- 927 (1391)
T ss_pred chHHHHHHHHHHcCCCcC-------------------------------CHHHHHHHHHHHHHHhCchhhhhhhccCCC-
Confidence 999999999988743211 122334679999999999999999999988
Q ss_pred cCCChhhhHHHHHHHHHhcCC-ccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc-
Q 001293 322 RGISGGQKKRVTTGEMMVGPA-LALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS- 399 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p-~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~- 399 (1106)
+|||.+||||++||..|+.+| .||||||||||||+.++..|++.+|+++. .|+|++|+||||+.++++.||++++|.
T Consensus 928 ~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~-tGqtIlCTIHQPS~~ife~FD~LLLLkr 1006 (1391)
T KOG0065|consen 928 SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLAD-TGQTILCTIHQPSIDIFEAFDELLLLKR 1006 (1391)
T ss_pred CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHh-cCCeEEEEecCCcHHHHHHHhHHHHHhc
Confidence 899999999999999999999 99999999999999999999999999997 789999999999999999999999996
Q ss_pred CCeEEEEcChH----HHHHHHHhCC-CCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhh
Q 001293 400 DGQIVYQGPRE----LVLEFFASMG-FRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKI 474 (1106)
Q Consensus 400 ~G~iv~~G~~~----~~~~~f~~~G-~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1106)
+|++||.||.. .+++||++.| .+||...|||||+.|+++...+.. ...++++.|++|...+++
T Consensus 1007 GGqtVY~G~lG~~s~~li~YFes~~~~~~~~~~NPA~~mLevi~~~~~~~------------~~~D~a~~w~~S~e~k~~ 1074 (1391)
T KOG0065|consen 1007 GGQTVYFGPLGENSSKLIEYFESIGGVKCISDENPAEWMLEVIGAGAEAS------------LSVDFAEIWKNSEEYKRN 1074 (1391)
T ss_pred CCeEEEecCcccccHHHHHHHHhcCCccCCCCCChHHHHHhhcccccccc------------cCccHHHHHhccHHHHHH
Confidence 67999999874 4677999987 999999999999999987644321 123788999999888877
Q ss_pred hhhhc---CCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCccc
Q 001293 475 SDELR---TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTV 551 (1106)
Q Consensus 475 ~~~~~---~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~ 551 (1106)
.+++. .+... ..........|+.++|.|++.|++|++...||++.+...|++..++.++++|+.||+.+ .+.
T Consensus 1075 ~e~v~~l~~~~~~--~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g---~~~ 1149 (1391)
T KOG0065|consen 1075 KELVKELSQPPPG--FSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVG---HNV 1149 (1391)
T ss_pred HHHHHHHhcCCcc--CCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecC---CcH
Confidence 66543 33322 12222345568999999999999999999999999999999999999999999999877 345
Q ss_pred ccchhhhHHHHHHHHHHHHhHHH-HHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCc
Q 001293 552 TDGGIFAGATFFAITMVNFNGFS-EISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYD 630 (1106)
Q Consensus 552 ~~~~~~~g~lff~~~~~~~~~~~-~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~ 630 (1106)
++.++.++++|.++++...+.-. ..+..-.++-++||||..++|+..+|+++.++.++|+.++.+.+|.++.||++||.
T Consensus 1150 q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~ 1229 (1391)
T KOG0065|consen 1150 QGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFY 1229 (1391)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccch
Confidence 56677788888887776554433 44455568899999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHH
Q 001293 631 SNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNA 710 (1106)
Q Consensus 631 ~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~a 710 (1106)
.++.+|+.+++..+.+......++.++.+++|+..+|..+.+++..++.+|+||++++..||.||+|+||+||+.|..++
T Consensus 1230 ~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~g 1309 (1391)
T KOG0065|consen 1230 WTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEG 1309 (1391)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCccccccC-------CCccccHHHHHhhcC----CccccchhHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 001293 711 IVANEFLGHSWKKFTQ-------DSSETLGVQVLKSRG----FFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLD 775 (1106)
Q Consensus 711 l~~nef~~~~~~~~~~-------~~~~~~g~~~L~~~~----~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~ 775 (1106)
++...+.+..-.|... ....+.|+.+-..++ +..+..-+ ...+.++|.+.+.+++.+..+|.+
T Consensus 1310 li~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~--~~c~~c~y~v~~~~l~~f~~~y~~ 1383 (1391)
T KOG0065|consen 1310 LISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLAT--TACVYCAYTVADAFLAAFNIKYLN 1383 (1391)
T ss_pred HHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcce--eEEEEeeeehHHHHHHHHHHHHHH
Confidence 9999998766555322 233456655555555 32221111 011223344555555555665543
No 10
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.6e-75 Score=764.78 Aligned_cols=559 Identities=24% Similarity=0.353 Sum_probs=461.1
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCH
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1106)
++.+|+|||+.++||++++|+|||||||||||++|+|+.++....+|+|++||+++.. ..++.++||+|+|.+++.+||
T Consensus 775 ~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~-~~~~~i~yv~Q~~~~~~~~Tv 853 (1394)
T TIGR00956 775 KRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS-SFQRSIGYVQQQDLHLPTSTV 853 (1394)
T ss_pred CcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh-hhhcceeeecccccCCCCCCH
Confidence 3569999999999999999999999999999999999987321227999999998753 346789999999999999999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+|||.|+++++.+... ..++....++++++.+||.+++|+.||+.+. +
T Consensus 854 ~E~L~~~a~l~~~~~~-------------------------------~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~ 901 (1394)
T TIGR00956 854 RESLRFSAYLRQPKSV-------------------------------SKSEKMEYVEEVIKLLEMESYADAVVGVPGE-G 901 (1394)
T ss_pred HHHHHHHHHhCCCCCC-------------------------------CHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-C
Confidence 9999999876532110 0011223578899999999999999997544 7
Q ss_pred CChhhhHHHHHHHHHhcCCc-cceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC-
Q 001293 324 ISGGQKKRVTTGEMMVGPAL-ALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG- 401 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~-vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G- 401 (1106)
|||||||||+||++|+.+|+ ||||||||||||+.++..|++.|+++++ .++|+|+++|||...+++.||+|++|++|
T Consensus 902 LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~-~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG 980 (1394)
T TIGR00956 902 LNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLAD-HGQAILCTIHQPSAILFEEFDRLLLLQKGG 980 (1394)
T ss_pred CCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHH-cCCEEEEEecCCCHHHHHhcCEEEEEcCCC
Confidence 99999999999999999997 9999999999999999999999999875 57899999999888888999999999987
Q ss_pred eEEEEcCh----HHHHHHHHhCCC-CCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhh
Q 001293 402 QIVYQGPR----ELVLEFFASMGF-RCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISD 476 (1106)
Q Consensus 402 ~iv~~G~~----~~~~~~f~~~G~-~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1106)
+++|+|+. +++.+||+++|+ +||+..|||||+.++.+...... ...++.+.|+.+...+...+
T Consensus 981 ~iv~~G~~~~~~~~~~~yf~~~G~~~~p~~~NpAd~~ldvi~~~~~~~------------~~~~~~~~~~~s~~~~~~~~ 1048 (1394)
T TIGR00956 981 QTVYFGDLGENSHTIINYFEKHGAPKCPEDANPAEWMLEVIGAAPGAH------------ANQDYHEVWRNSSEYQAVKN 1048 (1394)
T ss_pred EEEEECCcccccchHHHHHHhcCCCCCCCCCCHHHHHHHHhhcccccc------------hhccHHHHHhcCHHHHHHHH
Confidence 99999997 678999999996 99999999999999876432110 01234556665554444332
Q ss_pred hhc---CCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCccccc
Q 001293 477 ELR---TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTD 553 (1106)
Q Consensus 477 ~~~---~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~ 553 (1106)
++. .+..............+|..+++.|++.+++|.++..+||+.+...|+++.+++|+++|++|++.+.+ ..+
T Consensus 1049 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~~---~~~ 1125 (1394)
T TIGR00956 1049 ELDRLEAELSKAEDDNDPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGTS---LQG 1125 (1394)
T ss_pred HHHHhhcccccCccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCCC---HHH
Confidence 221 11110000000112246889999999999999999999999999999999999999999999977643 345
Q ss_pred chhhhHHHHHHHHHHHHhHHHHHHHHhhhhhh-HHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccc
Q 001293 554 GGIFAGATFFAITMVNFNGFSEISMTIAKLPV-FYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSN 632 (1106)
Q Consensus 554 ~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~v-f~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~ 632 (1106)
.+...|++|+.+++..+.....++.++.++++ |+|||.+++|++++|++++.+.++|+.++.+++|.+++||++|+.++
T Consensus 1126 i~~~~g~~f~~~~~~~~~~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~ 1205 (1394)
T TIGR00956 1126 LQNQMFAVFMATVLFNPLIQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWN 1205 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCc
Confidence 56678888888776665555566777777776 59999999999999999999999999999999999999999999888
Q ss_pred hHH-------HHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHH
Q 001293 633 AGR-------FFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLT 705 (1106)
Q Consensus 633 ~~~-------f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~ 705 (1106)
+.. |+.++++++++..++.+++.++++++++..+|..++++++.++++|+||+++.++||.||+|++|+||++
T Consensus 1206 ~~~~~~~~~~f~~~~~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~ 1285 (1394)
T TIGR00956 1206 ASKTGQVHERGVLFWLLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFT 1285 (1394)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHH
Confidence 765 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCccccccC-------------------------------CC---c----cccHHHHHhhcCCccccc
Q 001293 706 YAQNAIVANEFLGHSWKKFTQ-------------------------------DS---S----ETLGVQVLKSRGFFAHEY 747 (1106)
Q Consensus 706 y~~~al~~nef~~~~~~~~~~-------------------------------~~---~----~~~g~~~L~~~~~~~~~~ 747 (1106)
|++++++.|||.+....|... +. + ...|.++|+.+++...+
T Consensus 1286 y~~~~l~~~~~~~~~~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~- 1364 (1394)
T TIGR00956 1286 YLVQALLSTGLADVPVTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSG- 1364 (1394)
T ss_pred HHHHHHHHHHcCCCeeecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccc-
Confidence 999999999999877654220 00 1 34788899988876544
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001293 748 WYWLGLGALFGFVLLLNFAYTLALTFL 774 (1106)
Q Consensus 748 ~~w~~~~~l~~~~~~~~~~~~l~l~~~ 774 (1106)
.|.+++++++|++++ ++.++++.|.
T Consensus 1365 -~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1365 -RWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred -cccchhhhhHHHHHH-HHHHHhhheE
Confidence 588899999998877 6666667664
No 11
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-75 Score=733.78 Aligned_cols=803 Identities=20% Similarity=0.283 Sum_probs=450.3
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.-++..+++|+.+.+..+... .+...+.+.+.+...+.++|.+++=+.
T Consensus 483 ~vqa~VS~~Ri~~fl~~~e~~-----~~~~~~~~~~~~~~~i~i~~~sfsW~~--------------------------- 530 (1381)
T KOG0054|consen 483 LVQAKVSLKRLKEFLLSEELD-----PDSVERSPDEAGENAIEIKNGSFSWDS--------------------------- 530 (1381)
T ss_pred HHHHHHHHHHHHHHhcCcccC-----ccccccCCCCCCCceEEEeeeeEecCC---------------------------
Confidence 346778888888877665431 111112344455667888888877432
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNH 237 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~ 237 (1106)
....+.|+|||+.|++|+++||+||.|||||+||.+|.|+++.. +|+|.++| .++||+|++ |
T Consensus 531 ----~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~p-W 592 (1381)
T KOG0054|consen 531 ----ESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQP-W 592 (1381)
T ss_pred ----CCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEecccc-H
Confidence 12233899999999999999999999999999999999999976 99999998 499999987 6
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
+.+.||||||.|+..+. ..+|+...++|..+++.++.|++| .|.||
T Consensus 593 I~ngTvreNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIG 638 (1381)
T KOG0054|consen 593 IQNGTVRENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIG 638 (1381)
T ss_pred hhCCcHHHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceec
Confidence 66789999999998764 478999999999998887777776 59999
Q ss_pred cccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~-~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
++++ +||||||||+++|||++++++|++||+|.|++|+++..+|++ +++.+. .++|+|++ +| ..+....+|.|+
T Consensus 639 ErGi-nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILV-TH-ql~~L~~ad~Ii 713 (1381)
T KOG0054|consen 639 ERGI-NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILV-TH-QLQFLPHADQII 713 (1381)
T ss_pred CCcc-CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEE-eC-chhhhhhCCEEE
Confidence 9998 599999999999999999999999999999999999999995 675432 34565554 44 567889999999
Q ss_pred EEcCCeEEEEcChHHHHH---HHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhh
Q 001293 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQK 473 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1106)
+|++|+|+..|+++|+++ .|+++ ...+......+ ...++. ..+ ....+. +. +.......
T Consensus 714 vl~~G~I~~~Gty~el~~~~~~~~~l-~~~~~~~~~~~-----~~~~~~-------~~~---~~~~~~-~~-~~~~~~~~ 775 (1381)
T KOG0054|consen 714 VLKDGKIVESGTYEELLKSGGDFAEL-AHEEESEQEEE-----ASEKDL-------ESG---ESSRES-ES-RSLESLSS 775 (1381)
T ss_pred EecCCeEecccCHHHHHhcchhHHHH-hhccchhhccc-----cccccc-------ccc---ccccch-hh-hhhhhhcc
Confidence 999999999999999974 23332 00000000000 000000 000 000000 00 00000000
Q ss_pred hhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHH-HHHHHHH-HHHHHHHHHhcccCCCc--
Q 001293 474 ISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIF-KLIQIAF-VAVVYMTLFLRTKMHKD-- 549 (1106)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~-~~~~~~~-~~li~gt~f~~~~~~~~-- 549 (1106)
..+.. ......+...........+.-.|.- .+.+.....-.....+ -+++... +..+.+..|+....+..
T Consensus 776 ~~~~~-~~~~~~~~~~~~~ee~~~G~v~~~v-----Y~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~ 849 (1381)
T KOG0054|consen 776 EEEKS-KDEKEEEDKLVQEEERETGKVSWSV-----YKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGED 849 (1381)
T ss_pred ccccc-ccccchhhHHHHHHHHhcCEeeHHH-----HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 00000 0000000000000000001101111 1111111011111110 1111111 11122222222211111
Q ss_pred -cc--ccch----hhhHHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHH
Q 001293 550 -TV--TDGG----IFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFL 622 (1106)
Q Consensus 550 -~~--~~~~----~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i 622 (1106)
.. .+.. .|....+...++.++.++......+.....++.. +-..+++.|++|+++
T Consensus 850 ~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~------------ml~~Ilrapm~FFdt------ 911 (1381)
T KOG0054|consen 850 NGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDK------------LLNSILRAPMSFFDT------ 911 (1381)
T ss_pred ccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHhCcchhcCC------
Confidence 10 1111 1222222222222223322222222111111111 233455666666554
Q ss_pred hhhcccCccchHHHHHHHHHHHHH---------HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcc-------c
Q 001293 623 SYYVVGYDSNAGRFFKQYALLLGV---------NQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFI-------L 686 (1106)
Q Consensus 623 ~Y~~~g~~~~~~~f~~~~l~~~~~---------~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~-------i 686 (1106)
.+.||.++.|...... ..+...+..+++.+ .+++...-.+++.++.++..|+ .
T Consensus 912 --------TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~---~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~ 980 (1381)
T KOG0054|consen 912 --------TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGIL---VVISYVTPWFLIAIIPLGVIYYFVQRYYLA 980 (1381)
T ss_pred --------CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHH---HHhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777776543322 11111222222211 1111111111111111111111 1
Q ss_pred CcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCccccccCCCccccHHHHHhhcCCcc--------------------cc
Q 001293 687 SREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFA--------------------HE 746 (1106)
Q Consensus 687 ~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~--------------------~~ 746 (1106)
...++++.- ....||+.-.+.. ...|..++++++-.. ..
T Consensus 981 tsReLkRLe--sitRSPi~sh~~E-------------------tl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~ 1039 (1381)
T KOG0054|consen 981 TSRELKRLE--SITRSPIYSHFSE-------------------TLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSIS 1039 (1381)
T ss_pred HhHHHHHhh--hcccchHHHhHHH-------------------HhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHH
Confidence 111111100 0112333222211 112333333332110 01
Q ss_pred chhHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCccccc-----ccCCCCCCCCCCCCC
Q 001293 747 YWYWLGLGA--LFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLS-----TLGGSSNHNTRSGST 819 (1106)
Q Consensus 747 ~~~w~~~~~--l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 819 (1106)
...|+++-. +..+++++ .. .+++........+ +.+++. .+++..++..+..
T Consensus 1040 a~RWla~Rle~ig~~~v~~-~a-l~~vl~~~~~~~~------------------g~vGLslsyal~lt~~l~~~vR~~-- 1097 (1381)
T KOG0054|consen 1040 ANRWLAVRLELLGNLVVLI-AA-LFAVLLPSGLISP------------------GLVGLSLSYALQLTGLLQWLVRQS-- 1097 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHH-HH-HHHHHccCCCCCc------------------chHHHHHHHHHHHHHHHHHHHHHH--
Confidence 123444322 21111111 11 1111111100000 000000 0000011100000
Q ss_pred Cccccccc-ccchhhhhh--hhccCC--cc-CCcccCCCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeC
Q 001293 820 DDIRGQQS-SSQSLSLAE--AEASRP--KK-KGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRP 893 (1106)
Q Consensus 820 ~~~~~~~~-~~~~~~~~~--~~~~~~--~~-~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~ 893 (1106)
.+.+..+. .++..+..+ .+.... .. ....|| +.+.|+|+|++.+|.. +-..+|||||++|+|
T Consensus 1098 ~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP-~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p 1165 (1381)
T KOG0054|consen 1098 SELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWP-SKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKP 1165 (1381)
T ss_pred HHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCC-CCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcC
Confidence 00000000 011111111 111111 11 122233 4468999998655531 123699999999999
Q ss_pred CeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcC
Q 001293 894 GVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRL 970 (1106)
Q Consensus 894 G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~ 970 (1106)
||++||||++|||||||.++|.+..+ +.+|.|.|||.++.+ ..+|++++.+||+|.++ ++.+|.
T Consensus 1166 ~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLF-----------sGTvR~ 1232 (1381)
T KOG0054|consen 1166 GEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLF-----------SGTVRF 1232 (1381)
T ss_pred CceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCcee-----------cCcccc
Confidence 99999999999999999999998776 468999999999876 45788899999998875 344555
Q ss_pred CCCCChHHHHHHHHHHHHHcCCccccccccC------CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHH
Q 001293 971 SPEVDSETRKMFIDEVMELVELNPLRQSLVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1106)
Q Consensus 971 ~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g------~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~ 1044 (1106)
|.|+..+..++.+|++||.++|.+......+ .+|+.++|.||||.+|+||||+++++||+|||+|+++|+++..
T Consensus 1233 NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~ 1312 (1381)
T KOG0054|consen 1233 NLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDA 1312 (1381)
T ss_pred ccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHH
Confidence 5678888888999999999999876654432 2467899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1045 IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1045 ~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
.|+++||+.++ +||||+++|+++ ....+|||+||++ |+++++|+..
T Consensus 1313 lIQ~tIR~~F~-dcTVltIAHRl~--TVmd~DrVlVld~-G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1313 LIQKTIREEFK-DCTVLTIAHRLN--TVMDSDRVLVLDA-GRVVEFDSPA 1358 (1381)
T ss_pred HHHHHHHHHhc-CCeEEEEeeccc--hhhhcCeEEEeeC-CeEeecCChH
Confidence 99999999875 799999999987 3456899999997 5898988863
No 12
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.7e-72 Score=733.82 Aligned_cols=216 Identities=26% Similarity=0.402 Sum_probs=187.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+. +++.+|+||||.|++||++||+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 4889999877741 12469999999999999999999999999999999999876 5689999999886
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 935 ~~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
.. ...++.+|||+|++.+++.+|++|++.+.+.++.. +.++.++.++++++.++|.++.++.+ ..|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~---~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGV---PAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 23456799999999999999999999987766542 23344566889999999998888764 5799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
||||+||+||+.+|+||||||||+|||+.+++.+++.|+++.++|+|||+|||+++ ++...|||+++|++ |+++..|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999998878999999999987 68889999999986 68988887
Q ss_pred C
Q 001293 1093 L 1093 (1106)
Q Consensus 1093 ~ 1093 (1106)
.
T Consensus 2154 ~ 2154 (2272)
T TIGR01257 2154 I 2154 (2272)
T ss_pred H
Confidence 5
No 13
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.6e-70 Score=728.43 Aligned_cols=212 Identities=22% Similarity=0.302 Sum_probs=179.6
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1106)
.+.|+|+||+++|+. +..++|+||||+|+|||++||||+||||||||+++|+|... +.+|+|.|||.
T Consensus 1235 ~g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~ 1301 (1622)
T PLN03130 1235 SGSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGC 1301 (1622)
T ss_pred CCcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCE
Confidence 357999999999852 12359999999999999999999999999999999999766 56899999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccc-------ccCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGL 1002 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~g~ 1002 (1106)
++.+ ..+++.++||||++.++. -|+||||.++. +. .++.++++++.+++.++.+. .+|.
T Consensus 1302 dI~~i~l~~LR~~IsiVpQdp~LF~-GTIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge 1370 (1622)
T PLN03130 1302 DISKFGLMDLRKVLGIIPQAPVLFS-GTVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSE 1370 (1622)
T ss_pred ecccCCHHHHHhccEEECCCCcccc-ccHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccC
Confidence 8764 457789999999999886 49999997531 11 23458889999988765443 3333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
++.+||||||||+||||||+++|+||+||||||+||.++++.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1371 -~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd 1446 (1622)
T PLN03130 1371 -AGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLD 1446 (1622)
T ss_pred -CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEE
Confidence 346899999999999999999999999999999999999999999999986 4899999999986 456799999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++.+|+.
T Consensus 1447 ~-G~IvE~Gt~ 1456 (1622)
T PLN03130 1447 A-GRVVEFDTP 1456 (1622)
T ss_pred C-CEEEEeCCH
Confidence 6 699999874
No 14
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.3e-69 Score=713.43 Aligned_cols=216 Identities=19% Similarity=0.312 Sum_probs=179.6
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC------------
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 921 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~------------ 921 (1106)
+.|+|+||+|+|+.. ++.++|+|+||+|+||+++||+|+||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 469999999999732 1236999999999999999999999999999999999965531
Q ss_pred ----------------------------------------eeeeEEEEcCccCCc---ccccceEEEEccCCCCCCCCCH
Q 001293 922 ----------------------------------------YITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTI 958 (1106)
Q Consensus 922 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~tv 958 (1106)
+..|+|.+||.++.+ ..+++.+|||+|++.++. .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 148999999998754 467889999999998874 799
Q ss_pred HHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccc-------ccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001293 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1106)
Q Consensus 959 ~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illL 1031 (1106)
+|||.|+. ++.+ ++.++++++..++.++. |+.+|.. +..||||||||++|||||+++|+||||
T Consensus 1313 reNI~~g~-----~~at----~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDAT----REDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCC----HHHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 2222 23477888888776543 4555643 467999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCeEEEEecCccHHHHHhcCeEEEEecC---CE-EEEecC
Q 001293 1032 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GQ-EIYVGP 1092 (1106)
Q Consensus 1032 DEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G---g~-~~~~g~ 1092 (1106)
|||||+||+++++.|++.|+++. .+++|+|+++|+++ ..+.||+|++|++| |+ ++..|+
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gt 1446 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGT 1446 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecC
Confidence 99999999999999999999985 35899999999985 56789999999983 56 557777
No 15
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.7e-69 Score=716.21 Aligned_cols=211 Identities=21% Similarity=0.286 Sum_probs=178.9
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
+.|+|+||+++|+. +..++|+|||++|+|||++||+|+||||||||+++|+|..+ +.+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 57999999999852 12369999999999999999999999999999999999776 568999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccc-------ccCCC
Q 001293 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGLP 1003 (1106)
Q Consensus 934 ~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~g~~ 1003 (1106)
+.+ ..+++.++||||++.+++ -|+||||.++. +. .++.++++++.+++.++.+. .++.
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~-gTIr~NL~~~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e- 1367 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFS-GTVRFNIDPFS------EH----NDADLWEALERAHIKDVIDRNPFGLDAEVSE- 1367 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeC-ccHHHHcCCCC------CC----CHHHHHHHHHHcCCHHHHHhCcCCCCceecC-
Confidence 754 457889999999999886 59999997531 12 23457889999988765433 3333
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
++.+||||||||+||||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1368 ~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1368 GGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 346899999999999999999999999999999999999999999999875 5899999999986 4567999999986
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|+++.+|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 699999874
No 16
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-68 Score=617.81 Aligned_cols=491 Identities=27% Similarity=0.346 Sum_probs=375.2
Q ss_pred eEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHH
Q 001293 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1106)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1106)
=++.+||++++... .....+++||||++.+||+++|+|.|||||||+.++
T Consensus 5 lL~V~nL~v~~~~~------------------------------~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~ 54 (539)
T COG1123 5 LLEVENLTVEFATD------------------------------GGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALA 54 (539)
T ss_pred eEEEeceEEEEecC------------------------------CcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHH
Confidence 47899999998653 122569999999999999999999999999999999
Q ss_pred HhCCCCCC-CCceeEEEEcCccCCCCcc-------cceEEEEcCCC--CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHH
Q 001293 198 LAGKLDPT-LKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELA 267 (1106)
Q Consensus 198 L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~ 267 (1106)
|.|.+++. ...+|+|.++|.++..... .+.++||+|++ .+-|-+||.+.|.-..+.++...
T Consensus 55 i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~--------- 125 (539)
T COG1123 55 LMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGS--------- 125 (539)
T ss_pred HhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcccc---------
Confidence 99999986 4568999999997654432 26799999996 56777999988876665543221
Q ss_pred HHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCcccee
Q 001293 268 RREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFM 347 (1106)
Q Consensus 268 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllL 347 (1106)
..+....+.++|+..||++.... ++++.+|||||||||.||+||+.+|++|++
T Consensus 126 ------------------------~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~rQRv~iAmALa~~P~LLIa 178 (539)
T COG1123 126 ------------------------RAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMRQRVMIAMALALKPKLLIA 178 (539)
T ss_pred ------------------------HHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHHHHHHHHHHHhCCCCEEEE
Confidence 11223456788999999987654 568889999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCC
Q 001293 348 DEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRK 427 (1106)
Q Consensus 348 DEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~ 427 (1106)
||||++||..++.+|++.|+++.+ ..++.++.++|+..-+.++||+|+||.+|++++.|+.++++.. |.+
T Consensus 179 DEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~--------p~h- 248 (539)
T COG1123 179 DEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSN--------PQH- 248 (539)
T ss_pred CCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhc--------cCC-
Confidence 999999999999999999999876 4567777799999999999999999999999999999988541 110
Q ss_pred ChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCCccccccccccccccccCCcHHHHHHH
Q 001293 428 GVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKA 507 (1106)
Q Consensus 428 ~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~ 507 (1106)
||.. .+... .|.
T Consensus 249 ------------------------pYT~-----------------~Ll~a--~p~------------------------- 260 (539)
T COG1123 249 ------------------------PYTR-----------------GLLAA--VPR------------------------- 260 (539)
T ss_pred ------------------------cccH-----------------HHHhh--CCC-------------------------
Confidence 1000 00000 000
Q ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHHHHHHHHHHHhHHHHHHHHhhhhhhHH
Q 001293 508 NISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFY 587 (1106)
Q Consensus 508 ~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~ 587 (1106)
....
T Consensus 261 --------------------------------------~~~~-------------------------------------- 264 (539)
T COG1123 261 --------------------------------------LGDE-------------------------------------- 264 (539)
T ss_pred --------------------------------------cccc--------------------------------------
Confidence 0000
Q ss_pred HhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Q 001293 588 KQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVA 667 (1106)
Q Consensus 588 rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va 667 (1106)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCccccccCCCccccHHHHHhhcCCccccc
Q 001293 668 NTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEY 747 (1106)
Q Consensus 668 ~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~ 747 (1106)
..
T Consensus 265 ------------------------------------------------------~~------------------------ 266 (539)
T COG1123 265 ------------------------------------------------------KI------------------------ 266 (539)
T ss_pred ------------------------------------------------------cc------------------------
Confidence 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCcccccccCCCCCCCCCCCCCCccccccc
Q 001293 748 WYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQS 827 (1106)
Q Consensus 748 ~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1106)
. .. +..
T Consensus 267 -----------------------------------------------~-------------------~~--~~~------ 272 (539)
T COG1123 267 -----------------------------------------------I-------------------RL--PRR------ 272 (539)
T ss_pred -----------------------------------------------c-------------------cc--ccc------
Confidence 0 00 000
Q ss_pred ccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcH
Q 001293 828 SSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGK 907 (1106)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGK 907 (1106)
. ..+.+| -++.+|++-+|..++.+. .+ ..+...+++||||++++||++||||+|||||
T Consensus 273 ------------------~-~~~~~~-ll~V~~l~k~y~~~~~~~-~~-~~~~~~Av~~VSf~l~~GE~lglVGeSGsGK 330 (539)
T COG1123 273 ------------------G-PLRAEP-LLSVRNLSKRYGSRKGLF-VR-ERGEVKAVDDVSFDLREGETLGLVGESGSGK 330 (539)
T ss_pred ------------------c-ccccCc-eeEeeeeeeeeccccccc-cc-cccceeeeeeeeeEecCCCEEEEECCCCCCH
Confidence 0 000000 234455544443322110 00 0123568999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCeeeeEEEEcCccC--C---cccccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHH
Q 001293 908 TTLMDVLAGRKTGGYITGNITISGYPK--K---QETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRK 980 (1106)
Q Consensus 908 STLl~~L~g~~~~~~~~G~i~i~g~~~--~---~~~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~ 980 (1106)
|||.++|+|+.+ +..|.|.++|.+. . ....++.+-+++|++. +.|.+||++.+.-....... ....+++
T Consensus 331 STlar~i~gL~~--P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~~~~~~~ 406 (539)
T COG1123 331 STLARILAGLLP--PSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--GSGAERR 406 (539)
T ss_pred HHHHHHHhCCCC--CCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--cchHHHH
Confidence 999999999887 4689999999762 1 1234566778888874 67899999998866543322 2245566
Q ss_pred HHHHHHHHHcCCcc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CC
Q 001293 981 MFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GR 1058 (1106)
Q Consensus 981 ~~v~~~l~~~~l~~-~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~ 1058 (1106)
+.+.++++.++|.+ +.++. +.+||||||||+||||||+.+|++|++|||||.||+..++.|.++|+++.++ |.
T Consensus 407 ~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~ 481 (539)
T COG1123 407 ARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGL 481 (539)
T ss_pred HHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCC
Confidence 78999999999986 45554 4679999999999999999999999999999999999999999999999755 99
Q ss_pred eEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1059 TVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1059 tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|.|++|||++. +...|||+++|++ |++|..||.
T Consensus 482 t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 482 TYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred EEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 99999999985 8889999999986 699999974
No 17
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4.7e-67 Score=696.98 Aligned_cols=211 Identities=18% Similarity=0.223 Sum_probs=179.0
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
+.++|+||+++|+.. ...+|+||||+|+|||++||||+||||||||+++|.|... +.+|+|.|||.|
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 579999999999631 1359999999999999999999999999999999999766 568999999999
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccc-------ccCCC
Q 001293 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGLP 1003 (1106)
Q Consensus 934 ~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~g~~ 1003 (1106)
+.+ ..+++.++||||++.++.. |+||||.... +.+ ++.++++++.+++.++... .++.
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e- 1417 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAE- 1417 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecC-
Confidence 764 4578899999999999874 9999996211 122 3457889999988765433 3443
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
++.+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1418 ~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1418 GGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred CCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 346899999999999999999999999999999999999999999999875 5899999999985 5667999999986
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|+++.+|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 699999984
No 18
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-66 Score=628.40 Aligned_cols=457 Identities=21% Similarity=0.295 Sum_probs=347.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1106)
++|+|||+++++|++++|+|||||||||||++|+|.++| + +|+|.++|.++..... ++.++||+|++.+++
T Consensus 19 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 19 KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 499999999999999999999999999999999999986 5 8999999998765432 356999999988899
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.|+......+.. . . .+....++++++.+||++..+..+
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~-~---~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 141 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIM-D---Y---------------------------DAMYLRAQKLLAQLKLDINPATPV--- 141 (506)
T ss_pred CCcHHHHhhhcccccccCCc-C---H---------------------------HHHHHHHHHHHHHcCCCCCcccch---
Confidence 99999999987532110000 0 0 001124567899999987776655
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++.+ . +++|+.++|+..++.++||+|++|+
T Consensus 142 --~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~ 217 (506)
T PRK13549 142 --GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIR 217 (506)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999999854 3 4456667888899999999999999
Q ss_pred CCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhc
Q 001293 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1106)
+|++++.|+.+++.. .+..+.
T Consensus 218 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 238 (506)
T PRK13549 218 DGRHIGTRPAAGMTE--------------------------------------------DDIITM--------------- 238 (506)
T ss_pred CCEEeeecccccCCH--------------------------------------------HHHHHH---------------
Confidence 999998886543200 000000
Q ss_pred CCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhH
Q 001293 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1106)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1106)
+. + ..
T Consensus 239 -------------------------------------------------------------~~--~--~~---------- 243 (506)
T PRK13549 239 -------------------------------------------------------------MV--G--RE---------- 243 (506)
T ss_pred -------------------------------------------------------------hh--C--cC----------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHH
Q 001293 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1106)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1106)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 001293 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1106)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 719 (1106)
.+
T Consensus 244 ---------------------------------------------------~~--------------------------- 245 (506)
T PRK13549 244 ---------------------------------------------------LT--------------------------- 245 (506)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred ccccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCC
Q 001293 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1106)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1106)
. .. +. .
T Consensus 246 --------------------------~--------------------------~~-~~---------------------~ 251 (506)
T PRK13549 246 --------------------------A--------------------------LY-PR---------------------E 251 (506)
T ss_pred --------------------------c--------------------------cc-cc---------------------c
Confidence 0 00 00 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccC
Q 001293 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1106)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~ 879 (1106)
. .. + ....+.++|+++.|+.. +
T Consensus 252 ---------------------------------------~-~~-------~-~~~~l~~~~l~~~~~~~----------~ 273 (506)
T PRK13549 252 ---------------------------------------P-HT-------I-GEVILEVRNLTAWDPVN----------P 273 (506)
T ss_pred ---------------------------------------c-cC-------C-CCceEEEecCccccccc----------c
Confidence 0 00 0 00125677777665310 1
Q ss_pred ceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc----ccccceEEEEccCC---CC
Q 001293 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IH 952 (1106)
Q Consensus 880 ~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~ 952 (1106)
+..+|+||||+|++|+++||+|+||||||||+++|+|...+ +.+|+|.++|.++.. ...++.+||++|++ .+
T Consensus 274 ~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 352 (506)
T PRK13549 274 HIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGI 352 (506)
T ss_pred ccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCC
Confidence 23589999999999999999999999999999999997641 258999999976532 12345689999985 36
Q ss_pred CCCCCHHHHHHHHHhhcCCC--CCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeE
Q 001293 953 SPFVTIYESLLFSAWLRLSP--EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1029 (1106)
Q Consensus 953 ~~~~tv~e~l~~~~~~r~~~--~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~il 1029 (1106)
++.+||.||+.+........ ..+.+...+.++++++.+++. +..+.. +..|||||||||+||+||+.+|+||
T Consensus 353 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~kqrv~lA~al~~~p~ll 427 (506)
T PRK13549 353 VPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELA-----IARLSGGNQQKAVLAKCLLLNPKIL 427 (506)
T ss_pred cCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCcccc-----cccCCHHHHHHHHHHHHHhhCCCEE
Confidence 67899999998753211110 112233345688999999996 455655 3579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCCC
Q 001293 1030 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1106)
Q Consensus 1030 lLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g~ 1095 (1106)
||||||+|||+.+++.+++.|++++++|+|||++|||++ ++.+.||++++|++ |+++..|+...
T Consensus 428 lLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 428 ILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred EEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 999999999999999999999999888999999999987 58889999999987 58888887654
No 19
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.6e-66 Score=624.99 Aligned_cols=449 Identities=21% Similarity=0.321 Sum_probs=344.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK10762 18 KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQL 94 (501)
T ss_pred EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCC
Confidence 4999999999999999999999999999999999999998 9999999988754321 35699999998899999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.|+..........+ ..+.+..++++++.+||++..|..++
T Consensus 95 tv~e~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~~---- 140 (501)
T PRK10762 95 TIAENIFLGREFVNRFGRID------------------------------WKKMYAEADKLLARLNLRFSSDKLVG---- 140 (501)
T ss_pred cHHHHhhhccccccccCccC------------------------------HHHHHHHHHHHHHHcCCCCCccCchh----
Confidence 99999998643210000000 00012245678999999887765554
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++||.++|+..++.++||+|++|++|
T Consensus 141 -~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~G 217 (501)
T PRK10762 141 -ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRDG 217 (501)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 5999999999999999999999999999999999999999999998754 3 445666788999999999999999999
Q ss_pred eEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCC
Q 001293 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1106)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1106)
+++..|+.+++.. .+..+.
T Consensus 218 ~i~~~~~~~~~~~--------------------------------------------~~~~~~----------------- 236 (501)
T PRK10762 218 QFIAEREVADLTE--------------------------------------------DSLIEM----------------- 236 (501)
T ss_pred EEEEecCcCcCCH--------------------------------------------HHHHHH-----------------
Confidence 9998776543200 000000
Q ss_pred ccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHH
Q 001293 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1106)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1106)
++ .
T Consensus 237 -----------------------------------------------------------~~--~---------------- 239 (501)
T PRK10762 237 -----------------------------------------------------------MV--G---------------- 239 (501)
T ss_pred -----------------------------------------------------------hc--C----------------
Confidence 00 0
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHH
Q 001293 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1106)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1106)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK10762 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCcc
Q 001293 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1106)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 721 (1106)
...
T Consensus 240 -----------------------------------------------------------------------------~~~ 242 (501)
T PRK10762 240 -----------------------------------------------------------------------------RKL 242 (501)
T ss_pred -----------------------------------------------------------------------------CCc
Confidence 000
Q ss_pred ccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCcc
Q 001293 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1106)
Q Consensus 722 ~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1106)
.. ..+ .
T Consensus 243 ~~--------------------------------------------------~~~----------------------~-- 248 (501)
T PRK10762 243 ED--------------------------------------------------QYP----------------------R-- 248 (501)
T ss_pred cc--------------------------------------------------ccc----------------------c--
Confidence 00 000 0
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccCce
Q 001293 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1106)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~ 881 (1106)
. + . .+ .+..+.++|++.
T Consensus 249 --------------~--~-----------------------~-----~~-~~~~l~~~~l~~------------------ 265 (501)
T PRK10762 249 --------------L--D-----------------------K-----AP-GEVRLKVDNLSG------------------ 265 (501)
T ss_pred --------------c--c-----------------------c-----CC-CCcEEEEeCccc------------------
Confidence 0 0 0 00 001255666641
Q ss_pred EEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc----cccceEEEEccCC---CCCC
Q 001293 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSP 954 (1106)
Q Consensus 882 ~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~ 954 (1106)
.+|+|+||+|++|+++||+|+||||||||+++|+|... +.+|+|.++|.++... ..++.+||++|++ .+++
T Consensus 266 ~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~ 343 (501)
T PRK10762 266 PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVL 343 (501)
T ss_pred CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcC
Confidence 26999999999999999999999999999999999875 4689999999775321 2345699999996 4677
Q ss_pred CCCHHHHHHHHHhhcCC---CCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEE
Q 001293 955 FVTIYESLLFSAWLRLS---PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1030 (1106)
Q Consensus 955 ~~tv~e~l~~~~~~r~~---~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~ill 1030 (1106)
.+||.|++.+....... .....+..++.++++++.+++. +..++. +..|||||||||+|||+|+.+|+|||
T Consensus 344 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGekqrv~lA~al~~~p~lll 418 (501)
T PRK10762 344 GMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQA-----IGLLSGGNQQKVAIARGLMTRPKVLI 418 (501)
T ss_pred CCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEE
Confidence 89999999875321110 0112233345688899999994 556655 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCCC
Q 001293 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1106)
Q Consensus 1031 LDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g~ 1095 (1106)
|||||+|||+.++..+++.|+++.++|+|||++|||+. ++.+.||++++|++ |++++.|+...
T Consensus 419 LDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 419 LDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999999999999878999999999987 58889999999986 58888888754
No 20
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-66 Score=627.94 Aligned_cols=457 Identities=22% Similarity=0.299 Sum_probs=345.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 19 ~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 95 (510)
T PRK09700 19 HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDEL 95 (510)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999998889999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++...... .+.. ... ...+....++.+++.+||.+..++.++
T Consensus 96 tv~e~l~~~~~~~~~--~~~~-~~~------------------------~~~~~~~~~~~~l~~~gl~~~~~~~~~---- 144 (510)
T PRK09700 96 TVLENLYIGRHLTKK--VCGV-NII------------------------DWREMRVRAAMMLLRVGLKVDLDEKVA---- 144 (510)
T ss_pred cHHHHhhhccccccc--cccc-ccc------------------------CHHHHHHHHHHHHHHcCCCCCcccchh----
Confidence 999999875421000 0000 000 000112346778999999877776554
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.++||+|++|++|
T Consensus 145 -~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~G 221 (510)
T PRK09700 145 -NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKDG 221 (510)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 6999999999999999999999999999999999999999999999864 3 445566888999999999999999999
Q ss_pred eEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCC
Q 001293 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1106)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1106)
++++.|+++++.. .+..+.
T Consensus 222 ~i~~~g~~~~~~~--------------------------------------------~~~~~~----------------- 240 (510)
T PRK09700 222 SSVCSGMVSDVSN--------------------------------------------DDIVRL----------------- 240 (510)
T ss_pred EEeeecchhhCCH--------------------------------------------HHHHHH-----------------
Confidence 9999887654310 000000
Q ss_pred ccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHH
Q 001293 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1106)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1106)
+. + .. ..
T Consensus 241 -----------------------------------------------------------~~--~--~~-~~--------- 247 (510)
T PRK09700 241 -----------------------------------------------------------MV--G--RE-LQ--------- 247 (510)
T ss_pred -----------------------------------------------------------hc--C--CC-cc---------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHH
Q 001293 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1106)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1106)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCcc
Q 001293 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1106)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 721 (1106)
..+
T Consensus 248 ------------------------------------------------------------------------~~~----- 250 (510)
T PRK09700 248 ------------------------------------------------------------------------NRF----- 250 (510)
T ss_pred ------------------------------------------------------------------------ccc-----
Confidence 000
Q ss_pred ccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCcc
Q 001293 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1106)
Q Consensus 722 ~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1106)
. . ..+
T Consensus 251 ~----~----------------------------------------------~~~------------------------- 255 (510)
T PRK09700 251 N----A----------------------------------------------MKE------------------------- 255 (510)
T ss_pred c----c----------------------------------------------ccc-------------------------
Confidence 0 0 000
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccCce
Q 001293 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1106)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~ 881 (1106)
.. . .. + .+..+.++|+++.+.
T Consensus 256 -------------~~----------------------~--~~------~-~~~~l~~~~l~~~~~--------------- 276 (510)
T PRK09700 256 -------------NV----------------------S--NL------A-HETVFEVRNVTSRDR--------------- 276 (510)
T ss_pred -------------cc----------------------c--cC------C-CCcEEEEeCccccCC---------------
Confidence 00 0 00 0 001366777765421
Q ss_pred EEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc----ccccceEEEEccCC---CCCC
Q 001293 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSP 954 (1106)
Q Consensus 882 ~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~ 954 (1106)
.+|+|+||+|++|+++||+||||||||||+++|+|... +..|+|.++|.++.. ...++.+||++|++ .+++
T Consensus 277 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 354 (510)
T PRK09700 277 KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFP 354 (510)
T ss_pred CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcC
Confidence 27999999999999999999999999999999999875 468999999976532 12345689999983 5778
Q ss_pred CCCHHHHHHHHHhhcC--CC---C-CChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001293 955 FVTIYESLLFSAWLRL--SP---E-VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1106)
Q Consensus 955 ~~tv~e~l~~~~~~r~--~~---~-~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~ 1027 (1106)
.+||+||+.+....+. .. . ...+..+..++++++.+++. +..+.. +..|||||||||+|||+|+.+|+
T Consensus 355 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~lAral~~~p~ 429 (510)
T PRK09700 355 NFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQN-----ITELSGGNQQKVLISKWLCCCPE 429 (510)
T ss_pred CCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCc-----cccCChHHHHHHHHHHHHhcCCC
Confidence 8999999987532110 00 0 11222335578899999996 566665 35799999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1028 illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||||||||+|||+.++..+++.|++++++|.|||++|||+. ++.+.||++++|++ |++++.++.
T Consensus 430 lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 430 VIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred EEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999999999999999999999999878999999999987 58889999999987 588888765
No 21
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-66 Score=634.10 Aligned_cols=488 Identities=21% Similarity=0.243 Sum_probs=352.0
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCC----------CCc------c-cce
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----------EFV------P-QRT 227 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 227 (1106)
.++|+||||++++|++++|+|||||||||||++|+|+++|+ +|+|.++|..+. ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999998 999999986431 111 1 246
Q ss_pred EEEEcCCC--CCCCCCCHHHHHHHHHHhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 001293 228 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1106)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1106)
+|||+|++ .+++.+||+||+.++.+.. +.. + .+....++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-R---------------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 99999987 5788899999999986532 110 0 011234567899
Q ss_pred HcCCcc---ccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEE
Q 001293 305 VLGLDV---CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISL 381 (1106)
Q Consensus 305 ~lgL~~---~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i 381 (1106)
.+||++ ..+ +.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+.. +++||.+
T Consensus 152 ~~gL~~~~~~~~-----~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILS-----RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHh-----CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 234 3455799999999999999999999999999999999999999999999986533 4456668
Q ss_pred ecChhHHHhhcCeEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHH
Q 001293 382 LQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEF 461 (1106)
Q Consensus 382 ~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 461 (1106)
+|+..++.++||+|++|++|++++.|+++++.. .|.+....+++
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~---------------------------- 269 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALL---------------------------- 269 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhh----------------------------
Confidence 999999999999999999999999998876521 00000000000
Q ss_pred HHHHHhchhhhhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHH
Q 001293 462 AEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLF 541 (1106)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f 541 (1106)
... +
T Consensus 270 -~~~---------------~------------------------------------------------------------ 273 (623)
T PRK10261 270 -AAV---------------P------------------------------------------------------------ 273 (623)
T ss_pred -hcc---------------C------------------------------------------------------------
Confidence 000 0
Q ss_pred hcccCCCcccccchhhhHHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHH
Q 001293 542 LRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVF 621 (1106)
Q Consensus 542 ~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~ 621 (1106)
.... .
T Consensus 274 ---~~~~--~---------------------------------------------------------------------- 278 (623)
T PRK10261 274 ---QLGA--M---------------------------------------------------------------------- 278 (623)
T ss_pred ---cccc--c----------------------------------------------------------------------
Confidence 0000 0
Q ss_pred HhhhcccCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhh
Q 001293 622 LSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWC 701 (1106)
Q Consensus 622 i~Y~~~g~~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~i 701 (1106)
T Consensus 279 -------------------------------------------------------------------------------- 278 (623)
T PRK10261 279 -------------------------------------------------------------------------------- 278 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHhhcCCccccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Q 001293 702 SPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPR 781 (1106)
Q Consensus 702 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~ 781 (1106)
.+..... . . + ...
T Consensus 279 ---------------~~~~~~~----~-------------~---------------------------------~--~~~ 291 (623)
T PRK10261 279 ---------------KGLDYPR----R-------------F---------------------------------P--LIS 291 (623)
T ss_pred ---------------ccccCCc----c-------------c---------------------------------c--ccc
Confidence 0000000 0 0 0 000
Q ss_pred cceeccccccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecc
Q 001293 782 AVITEEIESNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEV 861 (1106)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v 861 (1106)
. .. . . ...+.. . .. .. +.....+.++|+
T Consensus 292 ~----~~-------~--~----------------~~~~~~----------~------~~-~~------~~~~~~L~~~~l 319 (623)
T PRK10261 292 L----EH-------P--A----------------KQEPPI----------E------QD-TV------VDGEPILQVRNL 319 (623)
T ss_pred c----cc-------c--c----------------ccCccc----------c------cc-cc------cCCCceEEEeee
Confidence 0 00 0 0 000000 0 00 00 000013778888
Q ss_pred cccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc-----
Q 001293 862 VYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----- 936 (1106)
Q Consensus 862 ~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----- 936 (1106)
++.|+..... ... ......+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++..
T Consensus 320 ~~~y~~~~~~-~~~-~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~ 395 (623)
T PRK10261 320 VTRFPLRSGL-LNR-VTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGK 395 (623)
T ss_pred EEEEcCCCcc-ccc-cCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHH
Confidence 8777421000 000 0012469999999999999999999999999999999999876 468999999986532
Q ss_pred -ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHH
Q 001293 937 -ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 937 -~~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGq 1012 (1106)
..+++.++|++|++ .+++.+||.|++.+....+.. ...+..++.+.++++.++|. ...+.. +.+|||||
T Consensus 396 ~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~--~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGq 468 (623)
T PRK10261 396 LQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGL--LPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQ 468 (623)
T ss_pred HHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHH
Confidence 12456799999997 477889999999876433211 12334456788999999995 455554 45799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||+|||||+.+|+||||||||+|||+.++..|++.|+++.++ |.|||++|||++ .+...||++++|++ |++++.|
T Consensus 469 rQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g 546 (623)
T PRK10261 469 RQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIG 546 (623)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 99999999999999999999999999999999999999998765 899999999997 57889999999986 5899988
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+..
T Consensus 547 ~~~ 549 (623)
T PRK10261 547 PRR 549 (623)
T ss_pred CHH
Confidence 743
No 22
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1e-64 Score=672.46 Aligned_cols=210 Identities=19% Similarity=0.250 Sum_probs=178.0
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
+.|+|+||+++|+. +..++|+||||+|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 57999999999863 12469999999999999999999999999999999999764 47999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccc-------ccCCC
Q 001293 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGLP 1003 (1106)
Q Consensus 934 ~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~g~~ 1003 (1106)
+.+ ..+++.++||||++.+++ -|+||||.... +..++.++++++.++|.+.... .++.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~-GTIR~NLdp~~----------~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFS-GTFRKNLDPYE----------QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCc-cCHHHHhCccc----------CCCHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 764 457789999999999987 59999995321 1124568999999998764433 3333
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
++.+||||||||+||||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 346799999999999999999999999999999999999999999999875 4799999999985 5667999999986
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|+++.+|+.
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 589998874
No 23
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.6e-65 Score=620.66 Aligned_cols=217 Identities=22% Similarity=0.325 Sum_probs=174.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEc-Ccc-
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS-GYP- 933 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~- 933 (1106)
++++|+++.|+... .+...+|+|+||+|++|+++||+|+||||||||+++|+|... +.+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISVD--------RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccCC--------CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcc
Confidence 56777777663100 012469999999999999999999999999999999999865 468999996 532
Q ss_pred --CCc------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-----cccccc
Q 001293 934 --KKQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-----LRQSLV 1000 (1106)
Q Consensus 934 --~~~------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-----~~~~~~ 1000 (1106)
... ...++.+||++|++.+++.+||.||+.+...+. ...+..++.+.++++.++|.+ +.+..
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 424 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY- 424 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-
Confidence 111 123456899999988888899999998753221 122323456788999999965 34444
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEE
Q 001293 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1079 (1106)
Q Consensus 1001 g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~ 1079 (1106)
+..|||||||||+|||||+.+|+||||||||+|||+.+++.+++.|++++++ |.|||++|||++ .+.+.||+++
T Consensus 425 ----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 425 ----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999998754 899999999987 5788999999
Q ss_pred EEecCCEEEEecCC
Q 001293 1080 LMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1080 ~l~~Gg~~~~~g~~ 1093 (1106)
+|++ |+++..|+.
T Consensus 500 ~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 500 LMRD-GKIVKIGDP 512 (520)
T ss_pred EEEC-CEEEEECCH
Confidence 9986 588888764
No 24
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.6e-65 Score=621.57 Aligned_cols=464 Identities=22% Similarity=0.292 Sum_probs=344.3
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCCcc-------cceEEEEcCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1106)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 459999999999999999999999999999999999998610 128999999998754321 24699999986
Q ss_pred C--CCCCCCHHHHHHHHHHhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc--
Q 001293 236 N--HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-- 310 (1106)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 310 (1106)
. +++.+||+|++.+..... +.. + .+....++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR-R---------------------------------EAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHCCCCChH
Confidence 4 567789999988654221 110 0 011234677899999975
Q ss_pred -ccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHH
Q 001293 311 -CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETY 389 (1106)
Q Consensus 311 -~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~ 389 (1106)
..+.. +..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++.. +.+||.++|+...+.
T Consensus 148 ~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQEL-NMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhc-CCeEEEEcCcHHHHH
Confidence 23444 45699999999999999999999999999999999999999999999986533 445666788888999
Q ss_pred hhcCeEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhch
Q 001293 390 DLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH 469 (1106)
Q Consensus 390 ~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1106)
++||+|++|++|++++.|+++++... |.. + ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~-------------------------~--------~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH-------------------------P--------YT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC-------------------------H--------HH-------
Confidence 99999999999999999987654210 000 0 00
Q ss_pred hhhhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 001293 470 VGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKD 549 (1106)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~ 549 (1106)
+. ++...
T Consensus 254 -----------------------------------------~~----------------------------~~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QK----------------------------LLNSE---- 260 (529)
T ss_pred -----------------------------------------HH----------------------------HHHhC----
Confidence 00 00000
Q ss_pred ccccchhhhHHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccC
Q 001293 550 TVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGY 629 (1106)
Q Consensus 550 ~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~ 629 (1106)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHH
Q 001293 630 DSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQN 709 (1106)
Q Consensus 630 ~~~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~ 709 (1106)
+
T Consensus 261 --------------------------------------------------------------~----------------- 261 (529)
T PRK15134 261 --------------------------------------------------------------P----------------- 261 (529)
T ss_pred --------------------------------------------------------------c-----------------
Confidence 0
Q ss_pred HHHHHhhcCCccccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceecccc
Q 001293 710 AIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIE 789 (1106)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~ 789 (1106)
.. .+.
T Consensus 262 -----------------~~----------------------------------------------~~~------------ 266 (529)
T PRK15134 262 -----------------SG----------------------------------------------DPV------------ 266 (529)
T ss_pred -----------------cc----------------------------------------------ccc------------
Confidence 00 000
Q ss_pred ccccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChh
Q 001293 790 SNEQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPE 869 (1106)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~ 869 (1106)
. + .. + .+..++++|+++.|+.+.
T Consensus 267 ---------~-------------------~-----------------------~~-----~-~~~~l~~~~l~~~~~~~~ 289 (529)
T PRK15134 267 ---------P-------------------L-----------------------PE-----P-ASPLLDVEQLQVAFPIRK 289 (529)
T ss_pred ---------c-------------------c-----------------------CC-----C-CCCcccccCcEEEeecCc
Confidence 0 0 00 0 000145566666553110
Q ss_pred hHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc------cccceE
Q 001293 870 EMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFARIS 943 (1106)
Q Consensus 870 ~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~ 943 (1106)
.- .++ ..+.+.+|+||||+|++|+++||+|+||||||||+++|+|... .+|+|.++|.++... .+++.+
T Consensus 290 ~~-~~~-~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i 364 (529)
T PRK15134 290 GI-LKR-TVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRI 364 (529)
T ss_pred cc-ccc-ccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhce
Confidence 00 000 0012469999999999999999999999999999999999763 489999999765321 134569
Q ss_pred EEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHH
Q 001293 944 GYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAV 1020 (1106)
Q Consensus 944 gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGqrqrl~iA~ 1020 (1106)
||++|++ .+++.+||.||+.++...+.. .......++.+.++++.+++. +..+.. +..|||||||||+|||
T Consensus 365 ~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~ 438 (529)
T PRK15134 365 QVVFQDPNSSLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIAR 438 (529)
T ss_pred EEEEeCchhhcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHH
Confidence 9999997 367789999999886533211 122333445688999999996 455554 4579999999999999
Q ss_pred HHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1021 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1021 aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||+.+|+||||||||+|||+.++..+++.|++++++ |+|||++|||++ ++.+.||++++|++ |+++..|+.
T Consensus 439 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 439 ALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred HHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999764 899999999987 57889999999987 588888875
No 25
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.8e-65 Score=617.63 Aligned_cols=453 Identities=21% Similarity=0.283 Sum_probs=342.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 25 ~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 101 (510)
T PRK15439 25 EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNL 101 (510)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988754432 24699999999899999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.|+.... + + ....++++++.+||++..+..++
T Consensus 102 tv~e~l~~~~~~~------~---~-----------------------------~~~~~~~~l~~~~l~~~~~~~~~---- 139 (510)
T PRK15439 102 SVKENILFGLPKR------Q---A-----------------------------SMQKMKQLLAALGCQLDLDSSAG---- 139 (510)
T ss_pred cHHHHhhcccccc------h---H-----------------------------HHHHHHHHHHHcCCCccccCChh----
Confidence 9999998853110 0 0 01235667899999877776554
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|++++. . +.+||.++|+..++.++||+|++|++|
T Consensus 140 -~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~G 216 (510)
T PRK15439 140 -SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRDG 216 (510)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 6999999999999999999999999999999999999999999999764 3 445666888999999999999999999
Q ss_pred eEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCC
Q 001293 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1106)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1106)
++++.|+.+++... +.+ +.+...
T Consensus 217 ~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~~------------- 239 (510)
T PRK15439 217 TIALSGKTADLSTD---------------DII-----------------------------QAITPA------------- 239 (510)
T ss_pred EEEEecChHHcCHH---------------HHH-----------------------------HHHhCc-------------
Confidence 99999987654210 000 000000
Q ss_pred ccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHH
Q 001293 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1106)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1106)
..... ...
T Consensus 240 ---------------------------------------------------------------~~~~~-~~~-------- 247 (510)
T PRK15439 240 ---------------------------------------------------------------AREKS-LSA-------- 247 (510)
T ss_pred ---------------------------------------------------------------ccccc-ccc--------
Confidence 00000 000
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHH
Q 001293 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1106)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1106)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCcc
Q 001293 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1106)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 721 (1106)
... .
T Consensus 248 -------------------------------------------------~~~---------------------------~ 251 (510)
T PRK15439 248 -------------------------------------------------SQK---------------------------L 251 (510)
T ss_pred -------------------------------------------------ccc---------------------------c
Confidence 000 0
Q ss_pred ccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCcc
Q 001293 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1106)
Q Consensus 722 ~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1106)
. ..+ + .
T Consensus 252 ~-----------------~~~---------------------------------~----------------------~-- 257 (510)
T PRK15439 252 W-----------------LEL---------------------------------P----------------------G-- 257 (510)
T ss_pred c-----------------ccc---------------------------------c----------------------c--
Confidence 0 000 0 0
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccCce
Q 001293 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1106)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~ 881 (1106)
. . .. . +..+..+..+|++.
T Consensus 258 --------------~-------------------~--~~--~------~~~~~~l~~~~l~~------------------ 276 (510)
T PRK15439 258 --------------N-------------------R--RQ--Q------AAGAPVLTVEDLTG------------------ 276 (510)
T ss_pred --------------c-------------------c--cc--c------CCCCceEEEeCCCC------------------
Confidence 0 0 00 0 00001256666651
Q ss_pred EEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc----cccceEEEEccCC---CCCC
Q 001293 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSP 954 (1106)
Q Consensus 882 ~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~ 954 (1106)
.+|+||||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.++... ..++.++|++|++ .+++
T Consensus 277 ~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~ 354 (510)
T PRK15439 277 EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYL 354 (510)
T ss_pred CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccC
Confidence 14899999999999999999999999999999999765 4589999999765321 1235689999984 4677
Q ss_pred CCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001293 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1106)
Q Consensus 955 ~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDE 1033 (1106)
.+|+.|++......+..........++.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||||||
T Consensus 355 ~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~kqrl~la~al~~~p~lLlLDE 429 (510)
T PRK15439 355 DAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQA-----ARTLSGGNQQKVLIAKCLEASPQLLIVDE 429 (510)
T ss_pred CCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCc-----cccCCcHHHHHHHHHHHHhhCCCEEEECC
Confidence 889999986431111000011122335678899999996 566655 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCCC
Q 001293 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1095 (1106)
Q Consensus 1034 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g~ 1095 (1106)
||+|||+.++..+++.|++++++|.|||++|||++ ++.+.||++++|++ |++++.|....
T Consensus 430 Pt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 430 PTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred CCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 99999999999999999999878999999999997 58889999999986 68988886653
No 26
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.2e-64 Score=669.40 Aligned_cols=211 Identities=24% Similarity=0.275 Sum_probs=179.0
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
+.|.|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|... +..|+|.|||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 57999999999852 12359999999999999999999999999999999999876 568999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 001293 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1106)
Q Consensus 934 ~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~g~~ 1003 (1106)
+.. ..+++.++||||++.++. -||+|||... .+.+ ++.++++++.+++.++. |..+|.
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~-gTIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge- 1441 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFD-GTVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLE- 1441 (1560)
T ss_pred cccCCHHHHHhcceEECCCCcccc-ccHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccC-
Confidence 754 467889999999999886 4999999531 1222 35589999999987654 333443
Q ss_pred CCCCCCHHHHHHHHHHHHHhcC-CCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1004 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~-p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
++.+||||||||+||||||+++ |+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1442 ~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1442 GGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred CcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 3468999999999999999995 89999999999999999999999999875 4799999999985 567899999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++.+|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 6 699999874
No 27
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=7.3e-65 Score=614.25 Aligned_cols=457 Identities=19% Similarity=0.272 Sum_probs=343.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1106)
++|+|||+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.+++
T Consensus 15 ~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 15 KALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred EeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 499999999999999999999999999999999999986 5 8999999998765332 356999999988899
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc-cccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA-DTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~ 318 (1106)
.+||+||+.++......+.... ..+....++.+++.+||.+.. +..
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQLDADNVTRP--- 138 (500)
T ss_pred CCcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCCCCCcccCc---
Confidence 9999999988643210000000 000112456789999997654 333
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+..|||||||||+||+||+.+|++|||||||+|||+.+...+.+.|++++. . +++|+.++|+..++.++||+|++|
T Consensus 139 --~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l 214 (500)
T TIGR02633 139 --VGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVI 214 (500)
T ss_pred --hhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEE
Confidence 446999999999999999999999999999999999999999999998864 3 455666888999999999999999
Q ss_pred cCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhh
Q 001293 399 SDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDEL 478 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (1106)
++|++++.|+.+++.. ....+
T Consensus 215 ~~G~i~~~~~~~~~~~--------------------------------------------~~~~~--------------- 235 (500)
T TIGR02633 215 RDGQHVATKDMSTMSE--------------------------------------------DDIIT--------------- 235 (500)
T ss_pred eCCeEeeecCcccCCH--------------------------------------------HHHHH---------------
Confidence 9999987664321100 00000
Q ss_pred cCCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhh
Q 001293 479 RTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFA 558 (1106)
Q Consensus 479 ~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~ 558 (1106)
.+. + ..
T Consensus 236 -------------------------------------------------------------~~~--~--~~--------- 241 (500)
T TIGR02633 236 -------------------------------------------------------------MMV--G--RE--------- 241 (500)
T ss_pred -------------------------------------------------------------HHh--C--cc---------
Confidence 000 0 00
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHH
Q 001293 559 GATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFK 638 (1106)
Q Consensus 559 g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~ 638 (1106)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcC
Q 001293 639 QYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLG 718 (1106)
Q Consensus 639 ~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~ 718 (1106)
.+. .
T Consensus 242 ----------------------------------------------------~~~---------------------~--- 245 (500)
T TIGR02633 242 ----------------------------------------------------ITS---------------------L--- 245 (500)
T ss_pred ----------------------------------------------------ccc---------------------c---
Confidence 000 0
Q ss_pred CccccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccC
Q 001293 719 HSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIG 798 (1106)
Q Consensus 719 ~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1106)
. +.
T Consensus 246 -------------------------------------------------------~-~~--------------------- 248 (500)
T TIGR02633 246 -------------------------------------------------------Y-PH--------------------- 248 (500)
T ss_pred -------------------------------------------------------c-cc---------------------
Confidence 0 00
Q ss_pred CcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhcccc
Q 001293 799 GNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLE 878 (1106)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~ 878 (1106)
. + ... .+..+.++|+++.++..
T Consensus 249 ~-------------------~---------------------~~~--------~~~~l~~~~l~~~~~~~---------- 270 (500)
T TIGR02633 249 E-------------------P---------------------HEI--------GDVILEARNLTCWDVIN---------- 270 (500)
T ss_pred c-------------------c---------------------cCC--------CCceEEEeCCccccccc----------
Confidence 0 0 000 00125677777654210
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc----ccccceEEEEccCC---C
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---I 951 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~ 951 (1106)
++..+|+|+||+|++||++||+|+||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|++ .
T Consensus 271 ~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 349 (500)
T TIGR02633 271 PHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHG 349 (500)
T ss_pred ccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCC
Confidence 123589999999999999999999999999999999998652 248999999977532 12356789999995 4
Q ss_pred CCCCCCHHHHHHHHHh--hcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCe
Q 001293 952 HSPFVTIYESLLFSAW--LRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSI 1028 (1106)
Q Consensus 952 ~~~~~tv~e~l~~~~~--~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~i 1028 (1106)
+++.+||+||+.++.. ............+..+.++++.+++.+ ..+.. +..||||||||++|||+|+.+|++
T Consensus 350 l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGqkqrv~la~al~~~p~l 424 (500)
T TIGR02633 350 IVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLP-----IGRLSGGNQQKAVLAKMLLTNPRV 424 (500)
T ss_pred cCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCc-----cccCCHHHHHHHHHHHHHhhCCCE
Confidence 7788999999987532 111011122333456788999999963 45554 357999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1029 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1029 llLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
|||||||+|||+.++..+++.+++++++|.|||++|||++ ++.+.||++++|++ |+++..++..
T Consensus 425 llLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 425 LILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred EEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999999999999999888999999999997 58889999999986 5788777643
No 28
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-65 Score=614.24 Aligned_cols=451 Identities=22% Similarity=0.309 Sum_probs=341.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc----ccceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.+++.+
T Consensus 18 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK11288 18 KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEM 94 (501)
T ss_pred EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCC
Confidence 4999999999999999999999999999999999999998 999999998875332 135799999998899999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++......+.. . ..+....++.+++.+||++..+..+
T Consensus 95 tv~~~l~~~~~~~~~~~~----~---------------------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 138 (501)
T PRK11288 95 TVAENLYLGQLPHKGGIV----N---------------------------RRLLNYEAREQLEHLGVDIDPDTPL----- 138 (501)
T ss_pred CHHHHHHhcccccccCCC----C---------------------------HHHHHHHHHHHHHHcCCCCCcCCch-----
Confidence 999999986321000000 0 0001224567889999986666544
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++.. . +++||.++|+..++.++||+|++|++|
T Consensus 139 ~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~G 216 (501)
T PRK11288 139 KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKDG 216 (501)
T ss_pred hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 445666788889999999999999999
Q ss_pred eEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhcCC
Q 001293 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1106)
Q Consensus 402 ~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (1106)
+++..++..+. .+..+..+.
T Consensus 217 ~i~~~~~~~~~-------------------------------------------~~~~~~~~~----------------- 236 (501)
T PRK11288 217 RYVATFDDMAQ-------------------------------------------VDRDQLVQA----------------- 236 (501)
T ss_pred EEEeecCcccc-------------------------------------------CCHHHHHHH-----------------
Confidence 99864421100 000000000
Q ss_pred ccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhHHH
Q 001293 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1106)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1106)
+. . ..
T Consensus 237 -----------------------------------------------------------~~--~--~~------------ 241 (501)
T PRK11288 237 -----------------------------------------------------------MV--G--RE------------ 241 (501)
T ss_pred -----------------------------------------------------------hc--C--CC------------
Confidence 00 0 00
Q ss_pred HHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHHHH
Q 001293 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1106)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~~l 641 (1106)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCCcc
Q 001293 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1106)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 721 (1106)
.
T Consensus 242 -------------------------------------------------------------------------------~ 242 (501)
T PRK11288 242 -------------------------------------------------------------------------------I 242 (501)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCCcc
Q 001293 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1106)
Q Consensus 722 ~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1106)
. .. ..
T Consensus 243 ~-----------------------~~---------------------------~~------------------------- 247 (501)
T PRK11288 243 G-----------------------DI---------------------------YG------------------------- 247 (501)
T ss_pred c-----------------------cc---------------------------cc-------------------------
Confidence 0 00 00
Q ss_pred cccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccCce
Q 001293 802 QLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKL 881 (1106)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~ 881 (1106)
. .+ . +..+..+.++|+++.
T Consensus 248 --------------~-~~-----------------------~------~~~~~~l~~~~~~~~----------------- 266 (501)
T PRK11288 248 --------------Y-RP-----------------------R------PLGEVRLRLDGLKGP----------------- 266 (501)
T ss_pred --------------c-cc-----------------------c------CCCCcEEEEeccccC-----------------
Confidence 0 00 0 000113566666521
Q ss_pred EEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc----ccccceEEEEccCC---CCCC
Q 001293 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSP 954 (1106)
Q Consensus 882 ~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~ 954 (1106)
.+++|+||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.++.. ...++.++|++|++ .+++
T Consensus 267 ~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 344 (501)
T PRK11288 267 GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIP 344 (501)
T ss_pred CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcC
Confidence 37999999999999999999999999999999999865 468999999976532 12345789999986 3778
Q ss_pred CCCHHHHHHHHHhhcCCC-C--CChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEE
Q 001293 955 FVTIYESLLFSAWLRLSP-E--VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIF 1030 (1106)
Q Consensus 955 ~~tv~e~l~~~~~~r~~~-~--~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~ill 1030 (1106)
.+|+.||+.++....... . ......++.++++++.+++. +..++. +..|||||||||+||++|+.+|+|||
T Consensus 345 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrl~la~al~~~p~lll 419 (501)
T PRK11288 345 VHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQL-----IMNLSGGNQQKAILGRWLSEDMKVIL 419 (501)
T ss_pred CCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCc-----cccCCHHHHHHHHHHHHHccCCCEEE
Confidence 899999998753211100 0 01222335678899999994 566655 35799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCCCC
Q 001293 1031 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRH 1096 (1106)
Q Consensus 1031 LDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g~~ 1096 (1106)
|||||+|||+.++..+++.|++++++|.|||++|||++ ++.+.||++++|++ |++++.|..++-
T Consensus 420 LDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~ 483 (501)
T PRK11288 420 LDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQA 483 (501)
T ss_pred EcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccC
Confidence 99999999999999999999999888999999999997 58899999999986 589999987653
No 29
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-64 Score=603.33 Aligned_cols=453 Identities=18% Similarity=0.282 Sum_probs=341.7
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1106)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 45999999999999999999999999999999999999998 9999999998754322 3569999999888999
Q ss_pred CCHHHHHHHHHH-hcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
+||+||+.++.. ..+.... . .+....++.+++.+||++..++.+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~-----~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVD-----Q---------------------------DKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhcccccccccccC-----H---------------------------HHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987532 1110000 0 001123567889999987666554
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||++|+.+|++|||||||+|||+.+..++.+.|++++. . +.+|+.++|+..++.++||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4455667888899999999999999
Q ss_pred CCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhc
Q 001293 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1106)
+|++++.|+++++.. .+..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998876543100 000000
Q ss_pred CCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhH
Q 001293 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1106)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1106)
+. + ..
T Consensus 230 -------------------------------------------------------------~~--~--~~---------- 234 (491)
T PRK10982 230 -------------------------------------------------------------MV--G--RS---------- 234 (491)
T ss_pred -------------------------------------------------------------Hh--C--CC----------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHH
Q 001293 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1106)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1106)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 001293 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1106)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 719 (1106)
.
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCC
Q 001293 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1106)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1106)
.. .+ +
T Consensus 236 -~~-------------------------------------------------~~--~----------------------- 240 (491)
T PRK10982 236 -TQ-------------------------------------------------RF--P----------------------- 240 (491)
T ss_pred -cc-------------------------------------------------cc--c-----------------------
Confidence 00 00 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccC
Q 001293 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1106)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~ 879 (1106)
. + . .. + .+..+.++|+++..
T Consensus 241 ---------------~---~-------------------~--~~------~-~~~~i~~~~l~~~~-------------- 260 (491)
T PRK10982 241 ---------------D---K-------------------E--NK------P-GEVILEVRNLTSLR-------------- 260 (491)
T ss_pred ---------------c---c-------------------c--CC------C-CCcEEEEeCccccc--------------
Confidence 0 0 0 00 0 01136777877642
Q ss_pred ceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc----cccceEEEEccCCC---C
Q 001293 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDI---H 952 (1106)
Q Consensus 880 ~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~---~ 952 (1106)
..+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++... ..++.++|++|++. +
T Consensus 261 -~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~ 337 (491)
T PRK10982 261 -QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGI 337 (491)
T ss_pred -CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCc
Confidence 138999999999999999999999999999999999876 4689999999775431 12456899999853 5
Q ss_pred CCCCCHHHHHHHHHh--hcCCCC-CChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCe
Q 001293 953 SPFVTIYESLLFSAW--LRLSPE-VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSI 1028 (1106)
Q Consensus 953 ~~~~tv~e~l~~~~~--~r~~~~-~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~i 1028 (1106)
++.+|+.+|..+... ...... ......++.+.++++.+++. +..+.. +.+|||||||||+||++|+.+|+|
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~i 412 (491)
T PRK10982 338 YAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEI 412 (491)
T ss_pred ccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCE
Confidence 677888877433211 000001 11223345678889999885 444554 457999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCCCCc
Q 001293 1029 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHS 1097 (1106)
Q Consensus 1029 llLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g~~~ 1097 (1106)
|||||||+|||+.++..+++.|+++.++|+|||++|||++ ++.+.||++++|++ |+++..++...-+
T Consensus 413 llLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~~~~ 479 (491)
T PRK10982 413 LMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTKTTT 479 (491)
T ss_pred EEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccccCC
Confidence 9999999999999999999999999888999999999997 58889999999986 5888777665433
No 30
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.2e-62 Score=593.53 Aligned_cols=214 Identities=19% Similarity=0.303 Sum_probs=165.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++|+++.|+ +..+|+|+||+|++|+++||+||||||||||+++|+|.... ...|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 377888887764 23589999999999999999999999999999999996431 1479999999764
Q ss_pred Cc----ccccceEEEEccCCCCCC--CCCHHHHHHHHHhh--cCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCC
Q 001293 935 KQ----ETFARISGYCEQNDIHSP--FVTIYESLLFSAWL--RLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1106)
Q Consensus 935 ~~----~~~~~~~gyv~q~~~~~~--~~tv~e~l~~~~~~--r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~ 1005 (1106)
.. ...++.+||++|++.+.. ..++++++.+.... ....... +..++.++++++.+++.+ ..+.. +
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~ 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAP-----F 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCc-----h
Confidence 21 123467999999875533 24677666543211 1111111 223456789999999986 66655 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCC-eEEEEecCccHHHHH-hcCeEEEEec
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGR-TVVCTIHQPSIDIFE-AFDELFLMKR 1083 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~-tvi~~~H~~~~~~~~-~~D~v~~l~~ 1083 (1106)
..|||||||||+||+||+.+|++|||||||+|||+.++..+++.|++++++|. |||++|||++ ++.+ .+|++++|++
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD 478 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC
Confidence 57999999999999999999999999999999999999999999999987764 6999999987 4666 5899999987
Q ss_pred CCEEEEe
Q 001293 1084 GGQEIYV 1090 (1106)
Q Consensus 1084 Gg~~~~~ 1090 (1106)
| ++++.
T Consensus 479 G-~i~~~ 484 (490)
T PRK10938 479 G-DIYRY 484 (490)
T ss_pred C-ceEEe
Confidence 5 55443
No 31
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3.9e-61 Score=521.08 Aligned_cols=471 Identities=24% Similarity=0.332 Sum_probs=364.7
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCCccc-------ceEEEEcC
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVPQ-------RTAAYISQ 233 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 233 (1106)
....++++|||.+++||.+||+|.||||||-..+.+.|+++. ....+|+|.|+|.++-....+ ..|+.|+|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 345699999999999999999999999999999999999976 345689999999997544322 47999999
Q ss_pred CC--CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 001293 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1106)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1106)
++ .+.|-.|+...|.-..+++.... ...++.++-++|+..|+++.
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg~~---------------------------------~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRGLS---------------------------------RAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhccc---------------------------------HHHHHHHHHHHHHHcCCCch
Confidence 97 56777788888877666542111 11233456778999999876
Q ss_pred cccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001293 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1106)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1106)
...+ +.++.+|||||||||.||.||+.+|++||.||||++||.....+|++.|+++-.. -+..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~-~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAE-LGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHH-hCcEEEEEeccHHHHHHh
Confidence 5443 4678899999999999999999999999999999999999999999999998664 466677799999999999
Q ss_pred cCeEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhh
Q 001293 392 FDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVG 471 (1106)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1106)
+|+|+||.+|+|+++|+.+.+.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999999876632 1111 000
Q ss_pred hhhhhhhcCCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCccc
Q 001293 472 QKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTV 551 (1106)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~ 551 (1106)
|.++ +
T Consensus 255 ---------------------------------------r~Ll------------------------------~------ 259 (534)
T COG4172 255 ---------------------------------------RKLL------------------------------A------ 259 (534)
T ss_pred ---------------------------------------HHHH------------------------------h------
Confidence 0000 0
Q ss_pred ccchhhhHHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCcc
Q 001293 552 TDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDS 631 (1106)
Q Consensus 552 ~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~ 631 (1106)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHH
Q 001293 632 NAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAI 711 (1106)
Q Consensus 632 ~~~~f~~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al 711 (1106)
+
T Consensus 260 ---------------------------a---------------------------------------------------- 260 (534)
T COG4172 260 ---------------------------A---------------------------------------------------- 260 (534)
T ss_pred ---------------------------c----------------------------------------------------
Confidence 0
Q ss_pred HHHhhcCCccccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceecccccc
Q 001293 712 VANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESN 791 (1106)
Q Consensus 712 ~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 791 (1106)
| | +
T Consensus 261 ---e------------------------------------------------------------P----~---------- 263 (534)
T COG4172 261 ---E------------------------------------------------------------P----S---------- 263 (534)
T ss_pred ---C------------------------------------------------------------C----C----------
Confidence 0 0 0
Q ss_pred ccccccCCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhH
Q 001293 792 EQDDRIGGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEM 871 (1106)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~ 871 (1106)
+ .+ ....+..|.-+..+|+...++.++.+
T Consensus 264 -------g------------------~~--------------------------~p~~~~~~~ll~~~~v~v~f~i~~g~ 292 (534)
T COG4172 264 -------G------------------DP--------------------------PPLPEDAPVLLEVEDLRVWFPIKGGF 292 (534)
T ss_pred -------C------------------CC--------------------------CCCCCCCCceEEecceEEEEecCCcc
Confidence 0 00 00000011224444444444333221
Q ss_pred HhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc------ccccceEEE
Q 001293 872 KVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETFARISGY 945 (1106)
Q Consensus 872 ~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gy 945 (1106)
-.. ......++++||++.++||.+||||.||||||||=.+|.++.. .+|.|.++|.++.. ...++.+-.
T Consensus 293 ~~r--~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQv 367 (534)
T COG4172 293 LRR--TVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQV 367 (534)
T ss_pred ccc--cchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceE
Confidence 100 0123569999999999999999999999999999999999775 35999999998753 246678899
Q ss_pred EccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHh
Q 001293 946 CEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELV 1023 (1106)
Q Consensus 946 v~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~ 1023 (1106)
|+|+|. +.|.+||.+-+.=+..... +..+..+++.++.++|+.+||++-... .. +.++|||||||++|||||+
T Consensus 368 VFQDPygSLsPRmtV~qII~EGL~vh~-~~ls~~eR~~rv~~aL~EVGLDp~~r~--RY--PhEFSGGQRQRIAIARAli 442 (534)
T COG4172 368 VFQDPYGSLSPRMTVGQIIEEGLRVHE-PKLSAAERDQRVIEALEEVGLDPATRN--RY--PHEFSGGQRQRIAIARALI 442 (534)
T ss_pred EEeCCCCCCCcccCHHHHhhhhhhhcC-CCCCHHHHHHHHHHHHHHcCCChhHhh--cC--CcccCcchhhHHHHHHHHh
Confidence 999985 6789999998887765544 346678889999999999999873322 12 4679999999999999999
Q ss_pred cCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1024 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1024 ~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
.+|++++||||||.||..-+..|.++++++.+ .|-+-++++||+.. +...||+++||++ |++|+.||.
T Consensus 443 LkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~V-vrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 443 LKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAV-VRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred cCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHHhhceEEEEeC-CEEeeeCCH
Confidence 99999999999999999999999999999964 49999999999974 7788999999986 699999995
No 32
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.4e-60 Score=582.02 Aligned_cols=201 Identities=20% Similarity=0.291 Sum_probs=164.1
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ ++.+|+||||+|++|+++||+|+||||||||+++|+|... +..|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 478899987763 2469999999999999999999999999999999999765 4689999843 2
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHH
Q 001293 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~-~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~~~LSgGq 1012 (1106)
..+||++|++ .+++.+||+|++.+....+.. ... ...+.++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 677889999999876422211 111 122456899999864 44544 35799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEE-Eec
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1091 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-~~g 1091 (1106)
|||++||++|+.+|++|||||||+|||+.++..+++.|+++ .| |||++|||++ .+.+.||++++|++||+++ +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF--PG-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CC-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 99999999999999999999999999999999999999987 24 8999999987 5788899999999877776 455
Q ss_pred C
Q 001293 1092 P 1092 (1106)
Q Consensus 1092 ~ 1092 (1106)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 33
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-60 Score=574.29 Aligned_cols=198 Identities=17% Similarity=0.252 Sum_probs=164.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++|+++.|+ ++.+|+|+||+|++|++++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488999988774 2358999999999999999999999999999999999865 46899999873
Q ss_pred CcccccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHH
Q 001293 935 KQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgG 1011 (1106)
+.+||++|++. +.+.+|++|++.+.. .. . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~---~~-~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWR---QE-G----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhc---cC-C----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 46899999864 455789999986421 11 1 1124577899999984 555554 4579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEE-Ee
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-~~ 1090 (1106)
||||++||++|+.+|+||||||||+|||+.++..+++.|+++ +.|||++|||++ .+...||++++|++| +++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~g-~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITPD-GVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEECC-eEEEcC
Confidence 999999999999999999999999999999999999999986 459999999987 578889999999975 565 77
Q ss_pred cCC
Q 001293 1091 GPL 1093 (1106)
Q Consensus 1091 g~~ 1093 (1106)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 34
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=2.3e-59 Score=571.32 Aligned_cols=201 Identities=18% Similarity=0.273 Sum_probs=163.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++|+++.++ ++.+|+||||+|++|+++||+|+||||||||+++|+|... +.+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECC-c-
Confidence 478899987763 2469999999999999999999999999999999999865 4689999843 2
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHH
Q 001293 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~-~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~~~LSgGq 1012 (1106)
..+||++|++ .+++.+||.|++.+...... .... ...+.++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1589999986 46778999999988642211 1111 123457899999864 34544 35799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEE-Eec
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1091 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-~~g 1091 (1106)
||||+||++|+.+|++|||||||+|||+.++..+++.|+++. .|||++|||++ .+...||++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999987 4778899999999877776 445
Q ss_pred C
Q 001293 1092 P 1092 (1106)
Q Consensus 1092 ~ 1092 (1106)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 35
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-57 Score=560.51 Aligned_cols=197 Identities=22% Similarity=0.347 Sum_probs=159.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ ++.+|+|+||+|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478899988764 2469999999999999999999999999999999999875 46899998641
Q ss_pred CcccccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHH
Q 001293 935 KQETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~~~LSgG 1011 (1106)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.+ ..+.. +..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~-----~~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEE-----TRRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCc-----hhhCCHH
Confidence 2589999974 24455677776531 1 11 112345788999999863 45554 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEE-Ee
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-~~ 1090 (1106)
|||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ . .|||+||||+. .+...||++++|++ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 3 49999999987 47889999999986 4665 77
Q ss_pred cCC
Q 001293 1091 GPL 1093 (1106)
Q Consensus 1091 g~~ 1093 (1106)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 764
No 36
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=6.9e-57 Score=556.77 Aligned_cols=201 Identities=23% Similarity=0.327 Sum_probs=162.3
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ ++.+|+|+||+|++|+++||+|+|||||||||++|+|... +..|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 377889987764 2469999999999999999999999999999999999765 46899998 4332
Q ss_pred CcccccceEEEEccCC-CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHHH
Q 001293 935 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~-~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgGq 1012 (1106)
.+||++|+. .+.+.+||.|++.+..... .... ....+.++++.+++. +..+.. +..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVNG--RPRHVLGYLQDFLFHPKRAMTP-----VKALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---cccc--hHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHH
Confidence 489999975 5778899999998753211 1111 123467888888885 344544 35799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe-cCCEEEEec
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-RGGQEIYVG 1091 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-~Gg~~~~~g 1091 (1106)
||||+||++|+.+|++|||||||+|||+.+...+.+.++++ +.|||++|||++ .+...||++++|+ +|.-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 469999999987 4778899999998 555455555
Q ss_pred C
Q 001293 1092 P 1092 (1106)
Q Consensus 1092 ~ 1092 (1106)
.
T Consensus 522 ~ 522 (635)
T PRK11147 522 G 522 (635)
T ss_pred C
Confidence 4
No 37
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.9e-57 Score=549.28 Aligned_cols=197 Identities=21% Similarity=0.237 Sum_probs=165.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++ + ..|+++||+|++||++||+|+||||||||+++|+|... +..|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 367788876653 1 24899999999999999999999999999999999876 468999885
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
..++|++|+..+.+.+||+|++.+.... . .. ...++++++.+++.+..++. +..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~--~---~~---~~~~~~~L~~l~l~~~~~~~-----~~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD--L---GS---SYYKSEIIKPLQLERLLDKN-----VKDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh--c---Ch---HHHHHHHHHHCCCHHHHhCC-----cccCCHHHHH
Confidence 1489999998878889999999875211 1 11 12467899999998877766 4579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||+||++|+.+|+||||||||+|||+.++..+++.|++++++ |+|||++|||+. .+...+|++++|+ | ++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeec
Confidence 999999999999999999999999999999999999999764 899999999987 4778899999996 3 67766764
No 38
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-56 Score=513.60 Aligned_cols=449 Identities=22% Similarity=0.371 Sum_probs=347.5
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc----ceEEEEcCCCCCC
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1106)
...++|+|||+.+++||+++|+|.||||||||+|+|+|.++|+ +|+|.+||.+.....++ .-|+.|.|+..++
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 3456999999999999999999999999999999999999999 99999999988765553 4689999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
|+|||.|||.++...... .-.+ +..+.+..+..+|+.+|++...++.|++
T Consensus 96 p~LsVaeNifLgre~~~~---~g~i---------------------------d~~~m~~~A~~~l~~lg~~~~~~~~v~~ 145 (500)
T COG1129 96 PNLSVAENIFLGREPTRR---FGLI---------------------------DRKAMRRRARELLARLGLDIDPDTLVGD 145 (500)
T ss_pred CCccHHHHhhcccccccC---CCcc---------------------------CHHHHHHHHHHHHHHcCCCCChhhhhhh
Confidence 999999999887543210 0000 0112234567789999997557888775
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
||+||||-|.||||+..+++|++|||||++|+...+..+++.++++. ..+..||.|+|..+|+++.||+|.||
T Consensus 146 -----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 146 -----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEEE
Confidence 99999999999999999999999999999999999999999999975 35677778999999999999999999
Q ss_pred cCCeEEEEcCh-HHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhh
Q 001293 399 SDGQIVYQGPR-ELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDE 477 (1106)
Q Consensus 399 ~~G~iv~~G~~-~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (1106)
.||+++..++. .+. +.+++.+
T Consensus 219 RDG~~v~~~~~~~~~--------------------------------------------~~~~lv~-------------- 240 (500)
T COG1129 219 RDGRVVGTRPTAAET--------------------------------------------SEDELVR-------------- 240 (500)
T ss_pred eCCEEeeecccccCC--------------------------------------------CHHHHHH--------------
Confidence 99999876652 211 0000000
Q ss_pred hcCCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhh
Q 001293 478 LRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1106)
Q Consensus 478 ~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~ 557 (1106)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHH
Q 001293 558 AGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFF 637 (1106)
Q Consensus 558 ~g~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~ 637 (1106)
.|+|=
T Consensus 241 -------------------------------------------------------------------~MvGr-------- 245 (500)
T COG1129 241 -------------------------------------------------------------------LMVGR-------- 245 (500)
T ss_pred -------------------------------------------------------------------HhhCc--------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhc
Q 001293 638 KQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFL 717 (1106)
Q Consensus 638 ~~~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 717 (1106)
++.
T Consensus 246 -----------------------------------------------------------------------------~~~ 248 (500)
T COG1129 246 -----------------------------------------------------------------------------ELE 248 (500)
T ss_pred -----------------------------------------------------------------------------chh
Confidence 000
Q ss_pred CCccccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceecccccccccccc
Q 001293 718 GHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRI 797 (1106)
Q Consensus 718 ~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1106)
..| + .
T Consensus 249 -~~~------------------------------------------------------~--~------------------ 253 (500)
T COG1129 249 -DLF------------------------------------------------------P--E------------------ 253 (500)
T ss_pred -hhc------------------------------------------------------c--c------------------
Confidence 000 0 0
Q ss_pred CCcccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccc
Q 001293 798 GGNVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVL 877 (1106)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~ 877 (1106)
. ... ...+..+++++++-.
T Consensus 254 -----------------------------------------~-~~~------~~~~~~l~v~~l~~~------------- 272 (500)
T COG1129 254 -----------------------------------------P-PEE------GIGEPVLEVRNLSGG------------- 272 (500)
T ss_pred -----------------------------------------c-ccc------CCCCcEEEEecCCCC-------------
Confidence 0 000 000112344444211
Q ss_pred cCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc----ccccceEEEEccCC---
Q 001293 878 EDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND--- 950 (1106)
Q Consensus 878 ~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~--- 950 (1106)
..++|+||++++||++||.|-=|||+|-|+++|+|... ...|+|.++|.+... ...+..++|||.+.
T Consensus 273 ----~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~ 346 (500)
T COG1129 273 ----GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSE 346 (500)
T ss_pred ----CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccC
Confidence 14889999999999999999999999999999999554 458999999997643 23556799999874
Q ss_pred CCCCCCCHHHHHHHHHhhcCC-C-CCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCe
Q 001293 951 IHSPFVTIYESLLFSAWLRLS-P-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSI 1028 (1106)
Q Consensus 951 ~~~~~~tv~e~l~~~~~~r~~-~-~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~i 1028 (1106)
-++..++|++|+.++...+.. . -.+....++.+++..+.+++..-.-.. -+..||||++||+.|||.|..+|+|
T Consensus 347 Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~----~v~~LSGGNQQKVvlarwL~~~p~v 422 (500)
T COG1129 347 GLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQ----PIGTLSGGNQQKVVLARWLATDPKV 422 (500)
T ss_pred cCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccc----hhhcCCchhhhhHHHHHHHhcCCCE
Confidence 467789999999888332221 1 345556667788899999885422211 1467999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1029 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1029 llLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||||.|+|..++..|.+++++++++|.+||++|-++. |+...||||+||++ |+++-
T Consensus 423 LilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~ 481 (500)
T COG1129 423 LILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVG 481 (500)
T ss_pred EEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999986 89999999999996 46654
No 39
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.3e-54 Score=535.74 Aligned_cols=199 Identities=19% Similarity=0.278 Sum_probs=157.1
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ ++..+|+|+||+|++|+++||+|||||||||||++|+|... +..|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 488999988874 12358999999999999999999999999999999999865 46899988652
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCHHHH
Q 001293 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~~~LSgGqr 1013 (1106)
..+||++|+.. +.+++.++..+...... .... ...+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~-~~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCF-PGVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhc-CCCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 35899999752 34556555433211111 1111 234678999999974 44443 457999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEE-EecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~-~~g~ 1092 (1106)
|||+||++|+.+|++|||||||+|||+.+...+++.+++. . .|||++|||+. .+...||++++|++ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 3 49999999987 47788999999986 5776 6665
No 40
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.8e-54 Score=508.16 Aligned_cols=220 Identities=28% Similarity=0.331 Sum_probs=172.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
+++|+|+|+.+.+|+.++|+|+|||||||||++|+|...|+ +|+|...+. -.++|++|++...+..||.
T Consensus 16 ~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~tv~ 84 (530)
T COG0488 16 RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKTVL 84 (530)
T ss_pred ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCccHH
Confidence 46999999999999999999999999999999999999998 999987642 3699999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChH---HHHH-HHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDID---VYMK-AIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~---~~~~-~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+.+.-+..- .++...+..... ...++++.. .+.. ....++.+.+..++.+|..||++.. ++.++
T Consensus 85 ~~v~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~--- 152 (530)
T COG0488 85 DYVIEGFGE-----LRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS--- 152 (530)
T ss_pred HHHHhhhHH-----HHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh---
Confidence 999866421 112222221111 111222111 1111 1223446667788999999999876 66555
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
.||||||.||+||++|+.+|++|+|||||++||..+..++-+.|++ ..+ ++|.++|++...-+.|++|+-++.
T Consensus 153 --~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~----~~g-tviiVSHDR~FLd~V~t~I~~ld~ 225 (530)
T COG0488 153 --SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR----YPG-TVIVVSHDRYFLDNVATHILELDR 225 (530)
T ss_pred --hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh----CCC-cEEEEeCCHHHHHHHhhheEEecC
Confidence 5999999999999999999999999999999999999999999985 234 566689999999999999999999
Q ss_pred CeE-EEEcChHHHHH
Q 001293 401 GQI-VYQGPRELVLE 414 (1106)
Q Consensus 401 G~i-v~~G~~~~~~~ 414 (1106)
|++ .|.|..+...+
T Consensus 226 g~l~~y~Gny~~~~~ 240 (530)
T COG0488 226 GKLTPYKGNYSSYLE 240 (530)
T ss_pred CceeEecCCHHHHHH
Confidence 987 67787765543
No 41
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=7.5e-52 Score=464.69 Aligned_cols=457 Identities=22% Similarity=0.321 Sum_probs=352.9
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc----ceEEEEcCCCCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIG 239 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1106)
...+++|||++|++||+.||+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ .-||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 456999999999999999999999999999999999999999 99999999998766554 46899999999999
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
++||.|||..+..-... .+. ...+....++++.+.+||+-..|.+|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~~------------------------------~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GLI------------------------------DRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-ccc------------------------------CHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999987632100 000 0011234567888999999988888875
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
||=||||||.|-++|+.+|++|||||||+-|-|.....+++.|++++. . +.+||.|+|-..|+.+.||++-||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~-G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-E-GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999875 4 4455568999999999999999999
Q ss_pred CCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcCchhhhhhhhhcCCCCccCCHHHHHHHHHhchhhhhhhhhhc
Q 001293 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (1106)
.|+++..-++. . + .+.+++++.
T Consensus 215 ~Gkvvgt~~~~----------------~------------------------~---~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDPV----------------A------------------------E---TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecCC----------------C------------------------C---CCHHHHHHH---------------
Confidence 99986432100 0 0 000000000
Q ss_pred CCccccccccccccccccCCcHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccchhhhH
Q 001293 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1106)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~~~~li~gt~f~~~~~~~~~~~~~~~~~g 559 (1106)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhhhhHHHhhhCCCCChhhHHHHHHHHHHhHHHHHHHHHHHHhhhcccCccchHHHHHH
Q 001293 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1106)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~rer~~~~y~~~~y~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f~~~ 639 (1106)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHhhcccCcCChhhHHHHHHhhcHHHHHHHHHHHHhhcCC
Q 001293 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1106)
Q Consensus 640 ~l~~~~~~~~~~~l~~~ia~~~~~~~va~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~ 719 (1106)
.
T Consensus 240 -------------------------------------------------------------------------------~ 240 (501)
T COG3845 240 -------------------------------------------------------------------------------R 240 (501)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred ccccccCCCccccHHHHHhhcCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccceeccccccccccccCC
Q 001293 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1106)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1106)
++.. +
T Consensus 241 ---------------~v~~-------------------------------------~----------------------- 245 (501)
T COG3845 241 ---------------EVVL-------------------------------------R----------------------- 245 (501)
T ss_pred ---------------cccc-------------------------------------c-----------------------
Confidence 0000 0
Q ss_pred cccccccCCCCCCCCCCCCCCcccccccccchhhhhhhhccCCccCCcccCCCCceeeeecccccccChhhHHhhccccC
Q 001293 800 NVQLSTLGGSSNHNTRSGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLED 879 (1106)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~ 879 (1106)
. + ..... |- +..+.++|++..-+ .
T Consensus 246 ----------------~--~--------------------~~~~~-----pg-~~vL~V~~L~v~~~------------~ 269 (501)
T COG3845 246 ----------------V--V--------------------KPPST-----PG-EVVLEVEDLSVKDR------------R 269 (501)
T ss_pred ----------------c--c--------------------cCCCC-----CC-CeEEEEeeeEeecC------------C
Confidence 0 0 00000 00 12356666654322 1
Q ss_pred ceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC-Cc----ccccceEEEEccCCC---
Q 001293 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK-KQ----ETFARISGYCEQNDI--- 951 (1106)
Q Consensus 880 ~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~-~~----~~~~~~~gyv~q~~~--- 951 (1106)
..+.+++|||+|++||++||.|..|-|-+.|+.+|+|... +..|+|.++|.+. .. ...+..++|+|.+..
T Consensus 270 ~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~--~~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~G 347 (501)
T COG3845 270 GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRK--PASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHG 347 (501)
T ss_pred CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCc--cCCceEEECCEeccccCCHHHHHhcCCccCChhhccCc
Confidence 2357999999999999999999999999999999999765 3459999999986 21 223456899999874
Q ss_pred CCCCCCHHHHHHHHHhhc----CCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001293 952 HSPFVTIYESLLFSAWLR----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1106)
Q Consensus 952 ~~~~~tv~e~l~~~~~~r----~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~ 1027 (1106)
+.+.+|+.||+.+...-+ ...-.+....+.+..++++.++....... .| ...||||++||+-+||+|.++|+
T Consensus 348 lv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~---~~-a~~LSGGNqQK~IlaREl~~~p~ 423 (501)
T COG3845 348 LVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD---AP-ARSLSGGNQQKLILARELARRPD 423 (501)
T ss_pred cccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC---cc-hhhcCCcceehhhhhhhhccCCC
Confidence 467899999998875421 11134556677888899999887632111 11 46799999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1028 illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
+|++.+||.|||..+.+.|.+.|.+.++.|+.|++++-+++ ++++.+|||.+|.+ |+++...+..
T Consensus 424 lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 424 LLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred EEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 99999999999999999999999999999999999999998 79999999999986 5887776654
No 42
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.4e-46 Score=452.49 Aligned_cols=241 Identities=43% Similarity=0.782 Sum_probs=224.9
Q ss_pred CCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeeeEEEEc
Q 001293 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITIS 930 (1106)
Q Consensus 852 ~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~ 930 (1106)
.+..+.|+|+++..+.+.. ..+++|+|||+.++|||++||||||||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3457899999988765421 3468999999999999999999999999999999999998764 689999999
Q ss_pred CccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 931 GYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 931 g~~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
|++.....+++.+|||+|+|.+.+.+||+|++.|++.+|.+...+.++++++|+++++.++|.+++|..+|.++.+++||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999888899999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||||+||.+|+.||.||||||||||||+.++..++++|++++++|||||||+|||+.++++.||++++|.+| +++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~G-~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSEG-EVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcCC-cEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999975 99999
Q ss_pred cCCCCCchhcccccc
Q 001293 1091 GPLGRHSCHLISYFE 1105 (1106)
Q Consensus 1091 g~~g~~~~~~~~yf~ 1105 (1106)
|+. +++++||+
T Consensus 253 G~~----~~~~~ff~ 263 (613)
T KOG0061|consen 253 GSP----RELLEFFS 263 (613)
T ss_pred cCH----HHHHHHHH
Confidence 995 67889986
No 43
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.8e-45 Score=372.99 Aligned_cols=220 Identities=25% Similarity=0.422 Sum_probs=187.9
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC----CcccceEEEEcCCCCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----FVPQRTAAYISQHDNHIG 239 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~~~~~~~~yv~Q~d~~~~ 239 (1106)
...+|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++.. ...++.+|+|+|+.++||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 456999999999999999999999999999999999999999 9999999976532 123578999999999999
Q ss_pred CCCHHHHHHHHHHh-cCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 240 EMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
.+||.||+..+... ++. ...+++....++|+.+||.+.+|.+
T Consensus 91 HlTvleNv~lap~~v~~~----------------------------------~k~eA~~~A~~lL~~VGL~~ka~~y--- 133 (240)
T COG1126 91 HLTVLENVTLAPVKVKKL----------------------------------SKAEAREKALELLEKVGLADKADAY--- 133 (240)
T ss_pred cchHHHHHHhhhHHHcCC----------------------------------CHHHHHHHHHHHHHHcCchhhhhhC---
Confidence 99999999987432 111 1123344567889999999988855
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+.+|||||||||+|||||+.+|+++++|||||+|||....++.+.+++++. .+ .+.+.++|....+-+.+|||+.|
T Consensus 134 --P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-eG-mTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 134 --PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred --ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-cC-CeEEEEechhHHHHHhhheEEEe
Confidence 557999999999999999999999999999999999999999999999986 44 44555788999999999999999
Q ss_pred cCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHh
Q 001293 399 SDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 435 (1106)
++|+++.+|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999987 456776667777754
No 44
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.9e-44 Score=405.42 Aligned_cols=202 Identities=20% Similarity=0.246 Sum_probs=157.6
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
..+.|+||.|.|+.. ..++++++|.+.+++.+|+||||||||||||+++.|... +..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~~~------------~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSDN------------PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCCc------------chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc
Confidence 358899999988632 258999999999999999999999999999999999776 457777543322
Q ss_pred CCcccccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 934 KKQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 934 ~~~~~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
.+++..|+.. +.-..++.|+++= ..++ +.+.+.+..++..+||..-.+... .++||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~-----~~~~---~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMP-----KFPD---EKELEEMRSILGRFGLTGDAQVVP----MSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHH-----hccc---cchHHHHHHHHHHhCCCccccccc----hhhcccc
Confidence 2334444322 2223466666541 1111 234456788999999985433221 5689999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||+||..|+.++..|.||+|||||+|||..+...+-+.|.+. ..+||+++||... |...++++.+..+|+...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999875 4699999999875 788899999999999999999
Q ss_pred CC
Q 001293 1092 PL 1093 (1106)
Q Consensus 1092 ~~ 1093 (1106)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 85
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.8e-45 Score=368.01 Aligned_cols=214 Identities=25% Similarity=0.368 Sum_probs=188.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
|.++||+.+| ++..+|+|||++|++||+++|+|||||||||||++|.++.. +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5677887665 35689999999999999999999999999999999999887 56899999996543
Q ss_pred ----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 ----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ----~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
-...++.+|+|+|+..+||.+||.||+.++...- ...++++.++.+.+.|+.+||.+.++.. +.+||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2357788999999999999999999999875432 2345666677788999999999988877 4679999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
|||||+|||||+.+|+++++|||||+|||+-...+++.+++++++|.|.||+||++.+ ..+.+|||++|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999986 7889999999985 6888888
Q ss_pred CC
Q 001293 1092 PL 1093 (1106)
Q Consensus 1092 ~~ 1093 (1106)
+.
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 63
No 46
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-43 Score=374.58 Aligned_cols=225 Identities=29% Similarity=0.382 Sum_probs=195.4
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc------cceEEEEcCCCC
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDN 236 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1106)
+..++|+|||++|++|++.+|+|+||||||||++++.++..|+ +|+|.++|.++..... ++.+|+|+|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999999 9999999988766542 478999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
++.+.||.||++|+.+..+... .+.+.++.++|+.+||++.+|.+
T Consensus 94 LLssrTV~~NvA~PLeiag~~k----------------------------------~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVPK----------------------------------AEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhccC-
Confidence 9999999999999988765321 12345688899999999888754
Q ss_pred ccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
+.+|||||||||+|||||+.+|+||++|||||+|||.|+..|++.|+++.++. +.+|+.++|-++-+-+.||||.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~l-glTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINREL-GLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHc-CCEEEEEechHHHHHHHhhhhe
Confidence 55799999999999999999999999999999999999999999999987654 5556668888999999999999
Q ss_pred EEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhcC
Q 001293 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTS 438 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~s 438 (1106)
+|++|+++++|+..++ |..|.+.-...|+.+...
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~~ 247 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETLE 247 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhcc
Confidence 9999999999999988 456776666667665543
No 47
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-43 Score=362.78 Aligned_cols=210 Identities=27% Similarity=0.413 Sum_probs=185.3
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGE 240 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1106)
++.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||.++.+... +|.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 456999999999999999999999999999999999999999 9999999999877553 6899999999999999
Q ss_pred CCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 001293 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||.|||.+-..++++.. ++.+.+++++|+.+||+.. ...+++
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 999999999877766432 1234568899999999742 123477
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
+.+|||||+|||.+||||+.+|+|++||||+++|||-++.++.+.++++-+.. +++||.++|+..|++.++|||++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l-~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKEL-GKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHh-CCEEEEEecCHHHHHhhhceEEEecC
Confidence 88999999999999999999999999999999999999999999998876544 45556689999999999999999999
Q ss_pred CeEEEEcChHHHHH
Q 001293 401 GQIVYQGPRELVLE 414 (1106)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1106)
|+++.++++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999864
No 48
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-42 Score=385.53 Aligned_cols=217 Identities=30% Similarity=0.450 Sum_probs=193.6
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc-ceEEEEcCCCCCCCCCCHHH
Q 001293 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1106)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.+++...|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999999 99999999999998775 89999999999999999999
Q ss_pred HHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCC
Q 001293 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1106)
||.|+.+.++... .+.+.+++++.+.|+|++..|.. +++||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 9999998875321 12334678889999999988754 56799
Q ss_pred hhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001293 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1106)
|||||||+|||||+.+|++++||||+|+||...+..+...|+++-+ .-++++|.++|+..|+..++|+|.+|.+|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~-~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE-RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH-hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999998644 455666778999999999999999999999999
Q ss_pred EcChHHHHHHHHhCCCCCCCCCChhHHHH
Q 001293 406 QGPRELVLEFFASMGFRCPKRKGVADFLQ 434 (1106)
Q Consensus 406 ~G~~~~~~~~f~~~G~~~p~~~~~ad~l~ 434 (1106)
.|++.++ |..|...-+|.|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999998 45677777777763
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.9e-43 Score=371.12 Aligned_cols=219 Identities=23% Similarity=0.331 Sum_probs=191.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
|.+++|+..+... ..+...+|+|||++|++||++||+|.||||||||++++.++.. |.+|+|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 5677876544321 1123579999999999999999999999999999999999887 57999999997654
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
. +.+++.+|+++|++.+....||+||+.|...+.. .++++.+.+|.+.++.+||.+..++. +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 3 3467889999999999999999999999987764 55788889999999999999888876 46899
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1088 (1106)
|||||||+|||||+.+|+||++|||||+|||++.+.|+++|+++.++ |.||+++||+++. +.+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999998644 9999999999974 7889999999986 6999
Q ss_pred EecCCC
Q 001293 1089 YVGPLG 1094 (1106)
Q Consensus 1089 ~~g~~g 1094 (1106)
..|++.
T Consensus 222 E~G~v~ 227 (339)
T COG1135 222 EEGTVS 227 (339)
T ss_pred EeccHH
Confidence 999864
No 50
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=367.30 Aligned_cols=217 Identities=25% Similarity=0.422 Sum_probs=186.1
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++|++++|+ ++ ++|+||||+|++|++++|+||||||||||+++|.|... +.+|+|.+.|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 478999999885 22 59999999999999999999999999999999999766 5699999999886
Q ss_pred CcccccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCC--CCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLS--PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~--~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
....-+..+|||||... ....+||+|-+..+...+.. .... ++.++.++++|+.+|+.+++++.+ .+|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i-----~~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQI-----GELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCcc-----cccCc
Confidence 65444568999999653 23458999999987543321 1222 233677999999999999999985 46999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||+||+.|||||+++|++|+|||||+|+|+.++..|+++|+++.++|+|||+++||++ .+.++||+++.|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 5899999999997 479999
Q ss_pred cCCCC
Q 001293 1091 GPLGR 1095 (1106)
Q Consensus 1091 g~~g~ 1095 (1106)
|+...
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99764
No 51
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.4e-42 Score=371.21 Aligned_cols=209 Identities=33% Similarity=0.470 Sum_probs=180.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc---ceEEEEcCCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1106)
++||+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.+
T Consensus 15 ~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~ 91 (258)
T COG1120 15 KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGL 91 (258)
T ss_pred eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCc
Confidence 45999999999999999999999999999999999999998 99999999998876653 7899999998888999
Q ss_pred CHHHHHHHHHHhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 001293 242 TVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1106)
Q Consensus 242 TV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
||+|-+.++..-. +.- . ...++....++..|+.+|+.+.++..+.
T Consensus 92 tV~d~V~~GR~p~~~~~-------------------~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~--- 137 (258)
T COG1120 92 TVYELVLLGRYPHLGLF-------------------G------------RPSKEDEEIVEEALELLGLEHLADRPVD--- 137 (258)
T ss_pred EEeehHhhcCCcccccc-------------------c------------CCCHhHHHHHHHHHHHhCcHHHhcCccc---
Confidence 9999999885321 100 0 0011112357888999999999987664
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
.|||||||||.|||||+++|++|+||||||+||...+.++++.++++.+..+ .+||++.|+...+.++||++++|++
T Consensus 138 --~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~-~tvv~vlHDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 138 --ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKG-LTVVMVLHDLNLAARYADHLILLKD 214 (258)
T ss_pred --ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEEC
Confidence 5999999999999999999999999999999999999999999999987544 4455577899999999999999999
Q ss_pred CeEEEEcChHHHH
Q 001293 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|+++++|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998875
No 52
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-42 Score=385.02 Aligned_cols=223 Identities=30% Similarity=0.440 Sum_probs=197.2
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1106)
...+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|.++....+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 356999999999999999999999999999999999999999 9999999999998776 488999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.|+.+.++...+ .+.+.+++++|+.++|++.++. ++.
T Consensus 94 V~~NVafGLk~~~~~~~---------------------------------~~i~~rv~e~L~lV~L~~~~~R-----~p~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLKK---------------------------------AEIKARVEEALELVGLEGFADR-----KPH 135 (352)
T ss_pred HHHHhhhhhhhcCCCCH---------------------------------HHHHHHHHHHHHHcCchhhhhh-----Chh
Confidence 99999999874431110 1233468889999999987764 455
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
+|||||||||+|||||+.+|++||||||.|+||..-+.++...|+++.+.. +.+.|.++|+..|+..++|||.+|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 799999999999999999999999999999999999999999999987755 5566668999999999999999999999
Q ss_pred EEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhh
Q 001293 403 IVYQGPRELVLEFFASMGFRCPKRKGVADFLQEV 436 (1106)
Q Consensus 403 iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 436 (1106)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 5678888889998654
No 53
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-42 Score=359.79 Aligned_cols=207 Identities=25% Similarity=0.374 Sum_probs=182.2
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++++++++. ...+|+|||++|.+||+++|+|||||||||||++|+|..+ +..|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 366788877764 2579999999999999999999999999999999999887 5689999999887
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
. ...+.+|||+|++.++|.+||+||+.|+...+. ...+++.+.+.++++.+||.++.++. +.+|||||||
T Consensus 68 ~--~p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 T--GPGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred C--CCCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 3 344578999999999999999999999977654 33455566899999999999999987 4689999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCeEEEEecCccHHHHHhcCeEEEEecC-CEE
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG-GQE 1087 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G-g~~ 1087 (1106)
|++|||||+.+|+||+||||+++||+.++..+++.+.++. ++++|||++|||.+ |...++|||++|.++ |++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999999999999986 45899999999987 788889999999986 444
No 54
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.6e-43 Score=408.24 Aligned_cols=254 Identities=21% Similarity=0.390 Sum_probs=207.6
Q ss_pred HhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCC---CcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHh
Q 001293 79 QERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL---PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1106)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1106)
.+..-..+|+++.+|..|. +. .-|... .+..|+|+||+|.|+.
T Consensus 432 mkgvGAs~rvFel~dr~P~-----i~----~~G~~~p~~~~G~IeF~~VsFaYP~------------------------- 477 (716)
T KOG0058|consen 432 MKGVGASERVFELMDRKPR-----IP----LTGTLAPDHLQGVIEFEDVSFAYPT------------------------- 477 (716)
T ss_pred HHhcchHHHHHHHhccCCC-----CC----CCCccccccccceEEEEEeeeecCC-------------------------
Confidence 4455567888888877665 22 124333 4678999999999843
Q ss_pred hhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEc
Q 001293 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1106)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 232 (1106)
+ ++.+||+|+|++|+|||.|||+|||||||||+.++|..+++|+ +|+|++||+|+.++++ ++.+|+|.
T Consensus 478 -----R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~ 548 (716)
T KOG0058|consen 478 -----R-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVG 548 (716)
T ss_pred -----C-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeee
Confidence 2 3467999999999999999999999999999999999999999 9999999999988876 48899999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 001293 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1106)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1106)
|+|.+|. -||+|||.|+.. ....|.+.++++....+ +. +.++++.+
T Consensus 549 QEPvLFs-~sI~eNI~YG~~----~~t~e~i~~AAk~ANah--------------------------~F---I~~~p~gY 594 (716)
T KOG0058|consen 549 QEPVLFS-GSIRENIAYGLD----NATDEEIEAAAKMANAH--------------------------EF---ITNFPDGY 594 (716)
T ss_pred ccceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhChH--------------------------HH---HHhCcccc
Confidence 9998775 599999999864 22333344443332221 11 45799999
Q ss_pred ccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhc
Q 001293 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1106)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1106)
||.||+++. .||||||||++|||||++||+||||||.||+||+.+...+.+.|.+..+ ++|+++ |.| +.++.+.+
T Consensus 595 ~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAH-RLSTV~~A 669 (716)
T KOG0058|consen 595 NTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAH-RLSTVRHA 669 (716)
T ss_pred ccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eeh-hhhHhhhc
Confidence 999999887 5999999999999999999999999999999999999999999988653 355544 444 57899999
Q ss_pred CeEEEEcCCeEEEEcChHHHHH
Q 001293 393 DDIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~~ 414 (1106)
|+|+++++|++++.|+++|+++
T Consensus 670 d~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 670 DQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred cEEEEEcCCeEEecccHHHHhh
Confidence 9999999999999999999875
No 55
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.4e-42 Score=368.32 Aligned_cols=217 Identities=27% Similarity=0.411 Sum_probs=188.8
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++.+|+++.|+ ++.+|+||||++++|++++|+|||||||||||++|+|... +..|+|.++|.++.
T Consensus 3 L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~ 67 (258)
T COG1120 3 LEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIA 67 (258)
T ss_pred eEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchh
Confidence 67889998885 4579999999999999999999999999999999999776 56899999999865
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCC-CCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~-~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ..++|.++|+||.+...+.+||+|-+.++..-.... ....++..+.++++|+.+++.+++++. +..||||
T Consensus 68 ~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-----~~~LSGG 142 (258)
T COG1120 68 SLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-----VDELSGG 142 (258)
T ss_pred hcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-----ccccChh
Confidence 4 568899999999998888899999999985432211 112233344689999999999999987 4679999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||+.|||||+++|+||+||||||+||...+..|+++++++. ++|.|||++.||++. ...+||++++|++ |+++..
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a~ 220 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVAQ 220 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEee
Confidence 9999999999999999999999999999999999999999998 559999999999985 8899999999986 689999
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 221 G~p~ 224 (258)
T COG1120 221 GTPE 224 (258)
T ss_pred cCcc
Confidence 9864
No 56
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.7e-42 Score=351.92 Aligned_cols=209 Identities=26% Similarity=0.365 Sum_probs=179.1
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc------cceEEEEcCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1106)
+.|++|||+.|++||+++|||||||||||||++|.|+++|+ +|+|.++|.++.+... ++.+|+++|+-.+|
T Consensus 21 ~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALF 97 (263)
T COG1127 21 RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALF 97 (263)
T ss_pred EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccc
Confidence 46999999999999999999999999999999999999999 9999999999876543 46799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
..+||+||+.|..+-+..-. + ...+..+..-|+..||+.. +.+
T Consensus 98 ssltV~eNVafplre~~~lp-----~----------------------------~~i~~lv~~KL~~VGL~~~----~~~ 140 (263)
T COG1127 98 SSLTVFENVAFPLREHTKLP-----E----------------------------SLIRELVLMKLELVGLRGA----AAD 140 (263)
T ss_pred cccchhHhhheehHhhccCC-----H----------------------------HHHHHHHHHHHHhcCCChh----hhh
Confidence 99999999999875432100 0 0112234445788899864 234
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
.++.+||||++||+++|||++.+|+++|+||||+||||.++..+.+.++++.... +.+++.++|+.++++..+|+|++|
T Consensus 141 ~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv~~L 219 (263)
T COG1127 141 LYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRVAVL 219 (263)
T ss_pred hCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceEEEE
Confidence 6777899999999999999999999999999999999999999999999987654 455555889999999999999999
Q ss_pred cCCeEEEEcChHHHHH
Q 001293 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
.+|+|+++|+++++.+
T Consensus 220 ~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 220 ADGKVIAEGTPEELLA 235 (263)
T ss_pred eCCEEEEeCCHHHHHh
Confidence 9999999999999864
No 57
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.1e-41 Score=380.96 Aligned_cols=215 Identities=30% Similarity=0.439 Sum_probs=188.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|++..|. .++.+|+||||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 5 i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~ 70 (293)
T COG1131 5 IEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVV 70 (293)
T ss_pred eeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCc
Confidence 45667765553 13679999999999999999999999999999999999887 46899999998865
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 936 ~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
. ...++.+||++|++.+++.+||+|+|.|.+.++.... +..++.++++++.++|.+..+.. +++||+|||
T Consensus 71 ~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~k 142 (293)
T COG1131 71 KEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMK 142 (293)
T ss_pred cCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHH
Confidence 4 4567889999999999999999999999998886543 34456789999999999855444 467999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||.||+||+.+|+++||||||+|||+.++..+++.|++++++| +||+++||+++ ++...||+|++|++ |++++.|+
T Consensus 143 qrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~ 220 (293)
T COG1131 143 QRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGT 220 (293)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 99999999999999999999999999999999999999999887 89999999997 68888999999986 69999997
Q ss_pred CC
Q 001293 1093 LG 1094 (1106)
Q Consensus 1093 ~g 1094 (1106)
..
T Consensus 221 ~~ 222 (293)
T COG1131 221 PE 222 (293)
T ss_pred HH
Confidence 54
No 58
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=356.75 Aligned_cols=192 Identities=27% Similarity=0.389 Sum_probs=169.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
.++|+|+|++|.+||+++|+|||||||||||++|+|+..|+ +|+|.++|.++ ..+...++||+|++.++|-+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 46999999999999999999999999999999999999998 99999999987 34567899999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+....+... .+...+++.+|+.+||.+..| +++.+|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~-----~~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFED-----KYPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhh-----cCcccc
Confidence 99999987764211 112235778899999998887 456689
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
||||||||+|||||+.+|++|+||||+++||+.|+..+.+.|.++.+..+ .+|+.++|+.+|+..++|||++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999999988877544 55666899999999999999999984
No 59
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-41 Score=350.50 Aligned_cols=216 Identities=27% Similarity=0.381 Sum_probs=191.6
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.|++++|+.++ +++.+++|||++|++||+++|||+||+||||||+.|.|... +..|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 47888887665 56789999999999999999999999999999999999887 5699999999986
Q ss_pred Cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccc-cccccCCCCCCC
Q 001293 935 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSG 1007 (1106)
Q Consensus 935 ~~------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~-~~~~~g~~g~~~ 1007 (1106)
.+ ...++++|+++|+-++|..+||+||+.|.. |.....+++..++.+..-|+.+||.+. .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 54 245678999999999999999999999864 444566777777888888999999876 5554 468
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
||||++||++||||++.+|+|||+||||+||||.++..+-++|+++.++ |.|+|++|||.+ +++..||++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999766 999999999998 69999999999997 69
Q ss_pred EEEecCCC
Q 001293 1087 EIYVGPLG 1094 (1106)
Q Consensus 1087 ~~~~g~~g 1094 (1106)
++..|+..
T Consensus 224 v~~~Gt~~ 231 (263)
T COG1127 224 VIAEGTPE 231 (263)
T ss_pred EEEeCCHH
Confidence 99999964
No 60
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.3e-41 Score=355.15 Aligned_cols=193 Identities=28% Similarity=0.429 Sum_probs=168.2
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc------cc-ccceEEEEccCCCCC
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ET-FARISGYCEQNDIHS 953 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~-~~~~~gyv~q~~~~~ 953 (1106)
..+|++||++|++||++||+|||||||||||++|.|... +..|.|.++|.+... .. +++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~--pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDK--PTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 579999999999999999999999999999999999877 468999999977542 12 345799999999999
Q ss_pred CCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccc-cccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEe
Q 001293 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1106)
Q Consensus 954 ~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~-~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLD 1032 (1106)
|.+||+||+.+...+.... ....+..++++++.++|.+..+ .. +.+|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999876554332 2245566889999999986655 43 4679999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1033 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1033 EPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
|||.+||.++.+.|++.++++.++ |+|||++|||+ ++...|||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999755 99999999997 5788999999999875
No 61
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.8e-42 Score=361.65 Aligned_cols=223 Identities=29% Similarity=0.443 Sum_probs=189.0
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCc---cCCCCcc-cceEEEEcCCCCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH---DMDEFVP-QRTAAYISQHDNHIG 239 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 239 (1106)
...+++|||+.|+.||+++|+|||||||||||++|+|+..|+ +|.|.+||. +.+.... .|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 355899999999999999999999999999999999999999 999999999 6555333 389999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.|||.+||+|+.+++.... . ..+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~~p-----~---------------------------~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKERP-----S---------------------------EAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhcccccccCC-----C---------------------------hhhHHHHHHHHHHHhcccchhh-----c
Confidence 9999999999997762100 0 1123456788899999987665 5
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
++.+|||||||||++||||+..|++|+||||+++||...+..+-+.|+++.... +.+.+.++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEec
Confidence 677899999999999999999999999999999999999999999999876543 4555568999999999999999999
Q ss_pred CCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHh
Q 001293 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~ 435 (1106)
+|+|...||++++. ..|...-++.|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999984 44655555555543
No 62
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.9e-41 Score=415.40 Aligned_cols=247 Identities=33% Similarity=0.613 Sum_probs=211.0
Q ss_pred CceeeeecccccccChhhH--------------Hhhc--cccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhC
Q 001293 853 PHSLTFDEVVYSVDMPEEM--------------KVQG--VLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG 916 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~--------------~~~~--~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g 916 (1106)
+.++.|.++.|.++..... +..+ ...+++.+|+|||++++|||++||+|||||||||||++|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 5689999999998754210 0011 11235679999999999999999999999999999999999
Q ss_pred CCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccc
Q 001293 917 RKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR 996 (1106)
Q Consensus 917 ~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~ 996 (1106)
+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|.+.++.+.....+++.+.++++++.++|.++.
T Consensus 117 ~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 876444689999999876432 3456899999999999999999999988766544445555667789999999999999
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcC
Q 001293 997 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1076 (1106)
Q Consensus 997 ~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D 1076 (1106)
++.+|...+.+||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.||
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 88887666788999999999999999999999999999999999999999999999988899999999999866899999
Q ss_pred eEEEEecCCEEEEecCCCCCchhcccccc
Q 001293 1077 ELFLMKRGGQEIYVGPLGRHSCHLISYFE 1105 (1106)
Q Consensus 1077 ~v~~l~~Gg~~~~~g~~g~~~~~~~~yf~ 1105 (1106)
++++|++ |+++|.|+. .++++||+
T Consensus 276 ~iilL~~-G~iv~~G~~----~~~~~~f~ 299 (659)
T PLN03211 276 SVLVLSE-GRCLFFGKG----SDAMAYFE 299 (659)
T ss_pred eEEEecC-CcEEEECCH----HHHHHHHH
Confidence 9999985 699999995 57999986
No 63
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-41 Score=350.42 Aligned_cols=213 Identities=26% Similarity=0.359 Sum_probs=189.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++|+||+..|. ++.+++|+|++|++||++.++|||||||||+|++|.++.+ +.+|+|.|+|.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 57888877664 4579999999999999999999999999999999999887 57999999999876
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc--ccccccCCCCCCCCCH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~--~~~~~~g~~g~~~LSg 1010 (1106)
. ..++|.+|||-|+-.++|.+||.||+.+-..+.. -+++..+++++|+|++++|++ +.++. +.+|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~~---w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLLG---WDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhcC---CCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 5 4688999999999999999999999998765543 356777888999999999986 67766 468999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
||+||+.+||||+++|+||+||||+++|||.++..+++.+.++.++ |+|||++|||.+ +.+.++|||.+|++ |+++.
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999998754 999999999998 78999999999985 67777
Q ss_pred ecCC
Q 001293 1090 VGPL 1093 (1106)
Q Consensus 1090 ~g~~ 1093 (1106)
+++.
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 7763
No 64
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=346.33 Aligned_cols=215 Identities=26% Similarity=0.378 Sum_probs=180.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc------cceEEEEcCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1106)
+++|+|||+.|++|||++|+|||||||||||++|.|+.+|+ +|+|.+||.++..... ++.+||++|+..+.
T Consensus 17 ~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv 93 (258)
T COG3638 17 HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLV 93 (258)
T ss_pred ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcc
Confidence 46999999999999999999999999999999999999998 9999999988765532 47899999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||.+|+..+..-+. +.+. ..+....++.+..+-..|+.+|+.+.+.+..+
T Consensus 94 ~r~sv~~NVl~grl~~~--s~~~------------------------slfglfsk~dk~~Al~aLervgi~~~A~qra~- 146 (258)
T COG3638 94 PRLSVLENVLLGRLGYT--STWR------------------------SLFGLFSKEDKAQALDALERVGILDKAYQRAS- 146 (258)
T ss_pred cccHHHHHHHhhhcccc--hHHH------------------------HHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc-
Confidence 99999999998763221 1111 01111112223455667999999988887765
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
.|||||+|||+|||||+.+|++++.|||+++|||.++.++|+.|+++....+.|+|+. +|..+-+.++||||+-|
T Consensus 147 ----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~n-LH~vdlA~~Y~~Riigl 221 (258)
T COG3638 147 ----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVN-LHQVDLAKKYADRIIGL 221 (258)
T ss_pred ----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEE-echHHHHHHHHhhheEe
Confidence 5999999999999999999999999999999999999999999999988666666665 55678899999999999
Q ss_pred cCCeEEEEcChHHHHH
Q 001293 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
++|+|+|.||++++.+
T Consensus 222 ~~G~ivfDg~~~el~~ 237 (258)
T COG3638 222 KAGRIVFDGPASELTD 237 (258)
T ss_pred cCCcEEEeCChhhhhH
Confidence 9999999999998654
No 65
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.1e-41 Score=377.16 Aligned_cols=212 Identities=34% Similarity=0.489 Sum_probs=184.5
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC--cccceEEEEcCCCCCCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1106)
.+++|+|||+.|++|++++|+|||||||||||++|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 467999999999999999999999999999999999999998 99999999887652 3457899999999999999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+|||.|.+++++.... .....++++++.+||++..+ +.+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~-----~~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKAN-----KKV 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhC-----cch
Confidence 999999999988764210 01235788999999998444 345
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
++||+||||||+||.||+++|++|||||||+|||+.++..+++.|++++.. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 679999999999999999999999999999999999999999999998863 4355556788889999999999999999
Q ss_pred eEEEEcChHHHHHHHHh
Q 001293 402 QIVYQGPRELVLEFFAS 418 (1106)
Q Consensus 402 ~iv~~G~~~~~~~~f~~ 418 (1106)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998776543
No 66
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-41 Score=348.59 Aligned_cols=220 Identities=26% Similarity=0.326 Sum_probs=187.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.|++++|+-.|+ +++++|+|||++|++||++||+|+|||||||||++|.|... +..|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 477888876664 45689999999999999999999999999999999999665 5689999999764
Q ss_pred Cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhc-----CCCCCChHHHHHHHHHHHHHcCCccccccccCCC
Q 001293 935 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLP 1003 (1106)
Q Consensus 935 ~~------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r-----~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~ 1003 (1106)
.. ..+++.+||++|++.+.+.+||.+|++.+..-+ ..-....++.+..+-++|+.+++.+.+-...
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 346788999999999999999999999874321 1112333445566778999999988877664
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+.|||||+|||+|||||+++|+||+.|||+++|||.+++.||+.|+++.+ +|.|||++.|+.+. ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 57999999999999999999999999999999999999999999999974 58999999999985 788999999998
Q ss_pred cCCEEEEecCCCC
Q 001293 1083 RGGQEIYVGPLGR 1095 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g~ 1095 (1106)
+ |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 6 69999999754
No 67
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=340.92 Aligned_cols=221 Identities=26% Similarity=0.398 Sum_probs=180.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1106)
+.+|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++.+. ..++.+|.|+|.++.
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 349999999999999999999999999999999998865 4568899999999997553 236899999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-cccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMV 316 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 316 (1106)
|| +|++||+.|+.+++|... +.+. .+++..|+.-+|.+ ..|.+
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~ld--------------------------------eiVe~sLk~AaLWdEVKDrL- 143 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KELD--------------------------------EIVESSLKKAALWDEVKDRL- 143 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHHH--------------------------------HHHHHHHHHhHhHHHhHHHh-
Confidence 99 999999999999887532 1111 23344444444422 22222
Q ss_pred ccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
++...+|||||+||++|||||+-+|+|||||||||+|||.++..|-+.+.++. ..-+|+.++|.+..+.+..|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhhh
Confidence 12345799999999999999999999999999999999999999999999874 34555558899999999999999
Q ss_pred EEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHH
Q 001293 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l 433 (1106)
.+..|+++++|+.+++ |..|..+...||+
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999987 4567776666665
No 68
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-41 Score=357.23 Aligned_cols=205 Identities=29% Similarity=0.448 Sum_probs=185.6
Q ss_pred ceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc---cCCc-ccccceEEEEccCCCCCCC
Q 001293 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY---PKKQ-ETFARISGYCEQNDIHSPF 955 (1106)
Q Consensus 880 ~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~q~~~~~~~ 955 (1106)
...+++|||+.|+.||++||.|||||||||||++|+|+.+ +..|.|.++|. +..+ ....|.+|||+|+..+++.
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999987 56899999998 5544 3456889999999999999
Q ss_pred CCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCC
Q 001293 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1106)
Q Consensus 956 ~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPt 1035 (1106)
|||.+|+.|+...+ ...++....+.++++.|+.++|+++.++. +.+||||||||+++||||+.+|++|+||||+
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998776 34455677788899999999999999987 4689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1036 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
++||+.-++.+.+.|+++.+. |.|+|++|||+. ++.+.||||++|++ |+++..|+..
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999876 999999999997 79999999999997 5888878754
No 69
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-40 Score=354.91 Aligned_cols=208 Identities=27% Similarity=0.429 Sum_probs=175.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCC--CCCCCCCH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHD--NHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 243 (1106)
++|+|||+.+++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+......+..+|||||.. .+-..+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 3999999999999999999999999999999999999998 999999999887766667899999953 34445899
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+|.+..+..-+. ....... .+.+..+++.|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~~-----g~~~~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGKK-----GWFRRLN-------------------------KKDKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCcccc-----ccccccc-------------------------HHHHHHHHHHHHHcCchhhhCCcccc-----
Confidence 999998742211 0011111 11134678899999999999988875
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.+. +.+|++++|+...+.++||+|++|+ +++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln-~~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLN-RHL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEc-Cee
Confidence 9999999999999999999999999999999999999999999998764 5556668999999999999999995 578
Q ss_pred EEEcChHHHHH
Q 001293 404 VYQGPRELVLE 414 (1106)
Q Consensus 404 v~~G~~~~~~~ 414 (1106)
++.|+++++.+
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999998753
No 70
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=4.3e-41 Score=414.46 Aligned_cols=241 Identities=38% Similarity=0.648 Sum_probs=208.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeeeEEEEcCcc
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1106)
.+.|.++. +++...-++. ++++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+
T Consensus 17 ~~~~~~~~-~~~~~~~~~~----~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~ 91 (617)
T TIGR00955 17 DGSWKQLV-SRLRGCFCRE----RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMP 91 (617)
T ss_pred cchhhhhh-hhcccccccc----cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEE
Confidence 35566665 4432221111 23567999999999999999999999999999999999987543 357999999998
Q ss_pred CCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCC-CCCCCHHH
Q 001293 934 KKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG-VSGLSTEQ 1012 (1106)
Q Consensus 934 ~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g-~~~LSgGq 1012 (1106)
.....+++.+|||+|+|.+++.+||+||+.|++.++.+.....+++++.++++++.++|.+.+|+.+|.++ ..+|||||
T Consensus 92 ~~~~~~~~~i~yv~Q~~~~~~~lTV~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGq 171 (617)
T TIGR00955 92 IDAKEMRAISAYVQQDDLFIPTLTVREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGE 171 (617)
T ss_pred CCHHHHhhhceeeccccccCccCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcch
Confidence 76666788899999999999999999999999988876666667777889999999999999999998754 46899999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||++||+||+.+|+++||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|+|+
T Consensus 172 rkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~ 250 (617)
T TIGR00955 172 RKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGS 250 (617)
T ss_pred hhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECC
Confidence 99999999999999999999999999999999999999999888999999999998789999999999985 69999999
Q ss_pred CCCCchhcccccc
Q 001293 1093 LGRHSCHLISYFE 1105 (1106)
Q Consensus 1093 ~g~~~~~~~~yf~ 1105 (1106)
. +++++||+
T Consensus 251 ~----~~~~~~f~ 259 (617)
T TIGR00955 251 P----DQAVPFFS 259 (617)
T ss_pred H----HHHHHHHH
Confidence 5 56888886
No 71
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-41 Score=335.35 Aligned_cols=201 Identities=28% Similarity=0.366 Sum_probs=183.0
Q ss_pred EEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc--ccccceEEEEccCCCCCCCCCHH
Q 001293 882 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTIY 959 (1106)
Q Consensus 882 ~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~~tv~ 959 (1106)
++++||||+++.|+++||+|+|||||||+|++|++... |.+|.|.++|.+... ...+|.+|.++.+.-++..+|++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 48999999999999999999999999999999999877 579999999998643 45778899999878888899999
Q ss_pred HHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCC
Q 001293 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1039 (1106)
Q Consensus 960 e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD 1039 (1106)
|||.|.+.+.. ....+.+++++++.+.++|.++.|+.++ +||.|+||||+|||||+.+|++++|||||||||
T Consensus 94 Enl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 99999998764 4456677889999999999999999864 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1040 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1040 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
..+.+.+.+.++++.+.|++||++||.++ ++...||++++|++ |++++.|..-
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 99999999999999888999999999987 78889999999997 5899999753
No 72
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.7e-40 Score=329.09 Aligned_cols=215 Identities=25% Similarity=0.330 Sum_probs=186.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
|.|++|+-.|+. ..++|+||||+|++||++-|+|||||||||||++|.+... +..|.|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 578898877753 3569999999999999999999999999999999999766 56899999999865
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.. -++|++|+|+|+.-+.+..||+||+.|....... ..++.+++|.++|+.+||.+..+.. +.+||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~---~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIGK---PPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccCC---CHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 32 3678999999999999999999999998766543 3456677899999999999888776 46799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
||||||++||||++.+|++|+.||||.+|||..+..||+++.++...|.|||+.|||.+. +...--+++.|.+ |+++.
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~l-v~~~~~rvl~l~~-Grl~~ 217 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLEL-VNRMRHRVLALED-GRLVR 217 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHH-HHhccCcEEEEeC-CEEEe
Confidence 999999999999999999999999999999999999999999998889999999999753 4445578999986 58877
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
....|
T Consensus 218 d~~~g 222 (223)
T COG2884 218 DESRG 222 (223)
T ss_pred ccccC
Confidence 66554
No 73
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.9e-41 Score=408.57 Aligned_cols=258 Identities=27% Similarity=0.368 Sum_probs=209.9
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.|+.+...+|+.++++.++|.-..+. ....+....+++|+|++|.+...
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~~~~~~g~I~~~nvsf~y~~~-------------------------- 484 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGDKT-----LIHLPKLQGEIEFENVSFRYGPD-------------------------- 484 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccc-----cccccccCceEEEEEEEEEeCCC--------------------------
Confidence 68899999999999999888211110 12333445789999999998531
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
...+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|++||++++...+ ++.++||+|+
T Consensus 485 ------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~ 555 (709)
T COG2274 485 ------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQD 555 (709)
T ss_pred ------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEccc
Confidence 125999999999999999999999999999999999999998 9999999999887765 5899999997
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+ ++++.||+||+.++. +....|.+.++++....+ + -+..++..+||
T Consensus 556 ~-~Lf~gSI~eNi~l~~----p~~~~e~i~~A~~~ag~~--------------------------~---fI~~lP~gy~t 601 (709)
T COG2274 556 P-FLFSGSIRENIALGN----PEATDEEIIEAAQLAGAH--------------------------E---FIENLPMGYDT 601 (709)
T ss_pred c-hhhcCcHHHHHhcCC----CCCCHHHHHHHHHHhCcH--------------------------H---HHHhccccccc
Confidence 6 556689999999875 223333344443332111 1 14568999999
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.||+.+. +||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++. .++|+|+..| ++.+.+.||+
T Consensus 602 ~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaH--Rl~ti~~adr 676 (709)
T COG2274 602 PVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAH--RLSTIRSADR 676 (709)
T ss_pred ccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEc--cchHhhhccE
Confidence 9998765 799999999999999999999999999999999999999999999874 3566666543 4578999999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+|+.+|+++++++
T Consensus 677 IiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 677 IIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred EEEccCCceeccCCHHHHHH
Confidence 99999999999999999976
No 74
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.5e-40 Score=347.32 Aligned_cols=196 Identities=30% Similarity=0.440 Sum_probs=166.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
.++|++||+.|++||+++|+|||||||||||++|.|+..|+ +|.|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999988876542 3679999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
+|++||+||+.+++.+.+.... ..+...+.+++.+||.+..+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~---- 136 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL---- 136 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc----
Confidence 9999999999998766543211 11234577889999986655
Q ss_pred cccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001293 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1106)
++.+.+|||||||||+|||||+.+|+++|.||||.+||+.++..|++.++++.+..+.|+|+ ++|+ +++...|||++.
T Consensus 137 ~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~-VTHd-~~lA~~~dr~i~ 214 (226)
T COG1136 137 KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIM-VTHD-PELAKYADRVIE 214 (226)
T ss_pred cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEE-EcCC-HHHHHhCCEEEE
Confidence 13345799999999999999999999999999999999999999999999988754445444 5665 678889999999
Q ss_pred EcCCeE
Q 001293 398 LSDGQI 403 (1106)
Q Consensus 398 L~~G~i 403 (1106)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 75
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=335.47 Aligned_cols=218 Identities=22% Similarity=0.318 Sum_probs=187.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCC---CCCCeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR---KTGGYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~---~~~~~~~G~i~i~g 931 (1106)
.++++|++.+|. .+.+|+|||+.|++++++||+|||||||||||++|.+. .++-..+|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 477889888774 45799999999999999999999999999999999973 23446789999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~ 1005 (1106)
.++.. ..++|.+|.|+|.|..+| +|++||+.|+..+....+ +..++.|++.|+...|.+ ..|++... .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 88643 357889999999999998 999999999988765543 667788999999998864 34444322 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
.+|||||+|||||||||+-+|+||+||||||+|||.+...|.+++.++. +.-|||++||.+. ...+..|+..++.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 5699999999999999999999999999999999999999999999997 4699999999986 58888999999987 5
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++|++|+..
T Consensus 225 ~LvE~g~T~ 233 (253)
T COG1117 225 ELVEFGPTD 233 (253)
T ss_pred EEEEEcCHH
Confidence 999999964
No 76
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-40 Score=365.84 Aligned_cols=214 Identities=28% Similarity=0.399 Sum_probs=190.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++||+-+|. +..+|+|||++|+.||+++|+|||||||||||++|||+.. +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 467788876653 2228999999999999999999999999999999999887 5799999999988
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 935 ~~-~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
+. ....|.+++|+|+.+++|.|||+||+.|+...+. .++++.+++|.++.+.++|.++.++. +.+||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 76 4567899999999999999999999999987764 34567788899999999999999987 467999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||+|||||+++|++++||||.|+||++.+..+...|+++.++ |.|+|.+|||.. |....+|++.+|+ .|++...|+
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998754 899999999975 8999999999998 578988887
Q ss_pred C
Q 001293 1093 L 1093 (1106)
Q Consensus 1093 ~ 1093 (1106)
.
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 4
No 77
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-40 Score=330.70 Aligned_cols=206 Identities=32% Similarity=0.380 Sum_probs=182.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC--cccceEEEEcCCCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 242 (1106)
..+++||||.++.||+++|+|||||||||+|++|++++.|+ +|.|++||.+.... ..++.+|.++-+..++..||
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT 91 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLT 91 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhh
Confidence 34899999999999999999999999999999999999999 99999999987543 23688999997788999999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
++|||.|.+++.+.. ..+.+.+++.+.+.|+|.+|.|+.+|+
T Consensus 92 ~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~---- 133 (245)
T COG4555 92 ARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE---- 133 (245)
T ss_pred HHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh----
Confidence 999999998876431 112345678899999999999999885
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
+|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++. ..+.+|+..+|..+|+..+||+|++|.+|+
T Consensus 134 -~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 134 -FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred -hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 99999999999999999999999999999999999999999999863 335566667899999999999999999999
Q ss_pred EEEEcChHHHHH
Q 001293 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+++.|+.+++.+
T Consensus 211 vv~~gs~~~l~~ 222 (245)
T COG4555 211 VVLEGSIEALDA 222 (245)
T ss_pred EEEcCCHHHHHH
Confidence 999999988754
No 78
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.4e-39 Score=368.37 Aligned_cols=206 Identities=24% Similarity=0.352 Sum_probs=177.3
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc------cceEEEEcCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1106)
+++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++..... ++.++||+|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999998866432 45799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.|+....+... .+...++.++++.+||.+..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999999765432110 011234567899999988777554
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..|||||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.+..+ .+|+.++|+...+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g-~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLG-LTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 56999999999999999999999999999999999999999999999875334 44555788899999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 79
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.1e-39 Score=365.89 Aligned_cols=215 Identities=27% Similarity=0.404 Sum_probs=186.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|++..|+ +..+|+||||+|++|+++||+||||||||||+++|+|... +..|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 578899987764 2469999999999999999999999999999999999876 5689999999986
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 935 ~~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
.. ...++.+|||+|++.+++.+||+||+.|.+.++. .+.++....++++++.++|.+..++.+ .+||+||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2356789999999999999999999998765542 223334456789999999988777663 5799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||++||+||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999997 68889999999986 58999998
Q ss_pred CC
Q 001293 1093 LG 1094 (1106)
Q Consensus 1093 ~g 1094 (1106)
..
T Consensus 222 ~~ 223 (306)
T PRK13537 222 PH 223 (306)
T ss_pred HH
Confidence 54
No 80
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-39 Score=369.06 Aligned_cols=205 Identities=24% Similarity=0.382 Sum_probs=178.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
.+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..++|.+||+
T Consensus 20 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~ 96 (351)
T PRK11432 20 TVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLG 96 (351)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998876554 37899999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+.+.++... .+.+..++++++.+||.+..+.. +..|
T Consensus 97 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~L 137 (351)
T PRK11432 97 ENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQI 137 (351)
T ss_pred HHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999876443210 01123467789999998776644 4579
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+|||||+.+|++|||||||++||+.++.++.+.|+++.+.. +++++.++|+..++.+++|+|++|++|+++
T Consensus 138 SgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~e~~~laD~i~vm~~G~i~ 216 (351)
T PRK11432 138 SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQF-NITSLYVTHDQSEAFAVSDTVIVMNKGKIM 216 (351)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999886533 455566888999999999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
..|+++++.
T Consensus 217 ~~g~~~~~~ 225 (351)
T PRK11432 217 QIGSPQELY 225 (351)
T ss_pred EEcCHHHHH
Confidence 999999874
No 81
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.3e-39 Score=369.79 Aligned_cols=206 Identities=28% Similarity=0.405 Sum_probs=178.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.++||+|+..+||.+||+
T Consensus 18 ~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (353)
T TIGR03265 18 TALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVA 94 (353)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHH
Confidence 4899999999999999999999999999999999999998 9999999998865443 47899999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+.+.++... .+.+..++++++.+||++..|.. +..|
T Consensus 95 eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~-----~~~L 135 (353)
T TIGR03265 95 DNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKY-----PGQL 135 (353)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCC-----hhhC
Confidence 99999875432110 01123467889999999877754 4579
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~ 214 (353)
T TIGR03265 136 SGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVIE 214 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 455556788899999999999999999999
Q ss_pred EEcChHHHHH
Q 001293 405 YQGPRELVLE 414 (1106)
Q Consensus 405 ~~G~~~~~~~ 414 (1106)
+.|+++++.+
T Consensus 215 ~~g~~~~~~~ 224 (353)
T TIGR03265 215 QVGTPQEIYR 224 (353)
T ss_pred EEcCHHHHHh
Confidence 9999998743
No 82
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-39 Score=370.26 Aligned_cols=205 Identities=25% Similarity=0.364 Sum_probs=177.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|++.++|++||+
T Consensus 18 ~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (356)
T PRK11650 18 QVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVR 94 (356)
T ss_pred EEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999998866544 37899999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+.+..+... .+....++++++.+||++..+..+ +.|
T Consensus 95 eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 135 (356)
T PRK11650 95 ENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRKP-----REL 135 (356)
T ss_pred HHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 99999875432110 011234677899999988776554 569
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+|||||+.+|++|+||||||+||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i~ 214 (356)
T PRK11650 136 SGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVAE 214 (356)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999999876533 455666788899999999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
..|+++++.
T Consensus 215 ~~g~~~~~~ 223 (356)
T PRK11650 215 QIGTPVEVY 223 (356)
T ss_pred EECCHHHHH
Confidence 999999874
No 83
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=4e-39 Score=369.51 Aligned_cols=206 Identities=23% Similarity=0.347 Sum_probs=178.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCce--eEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVS--GTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|+++|+ + |+|.++|.++....+ ++.++||+|+..+++.+|
T Consensus 19 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~t 95 (362)
T TIGR03258 19 TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLK 95 (362)
T ss_pred EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCc
Confidence 4999999999999999999999999999999999999998 8 999999998865443 467999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.|+.+..+... .+.+..++++++.+||++..|+.+ +
T Consensus 96 v~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~-----~ 136 (362)
T TIGR03258 96 VEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP-----A 136 (362)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----h
Confidence 9999999875432110 011234677899999988777554 5
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|+
T Consensus 137 ~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~ 216 (362)
T TIGR03258 137 QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGR 216 (362)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999987653324566668899999999999999999999
Q ss_pred EEEEcChHHHH
Q 001293 403 IVYQGPRELVL 413 (1106)
Q Consensus 403 iv~~G~~~~~~ 413 (1106)
++..|+++++.
T Consensus 217 i~~~g~~~~~~ 227 (362)
T TIGR03258 217 LAAHGEPQALY 227 (362)
T ss_pred EEEEcCHHHHH
Confidence 99999999884
No 84
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-40 Score=365.31 Aligned_cols=215 Identities=27% Similarity=0.383 Sum_probs=191.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++||+-.|. +..+++|||++|++||+++|+|||||||||||++|||... +..|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 578888876553 4579999999999999999999999999999999999887 5689999999998
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 935 ~~~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
... ..+|.+|+|+|+-++||.|||+||+.|+..++. ...+++.+++|+++++.++|.++.++. +.+||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 653 457889999999999999999999999976432 344566778899999999999999887 467999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||+|||||+.+|++|+||||.|+||..-+..++..++++.+ .|.|.|++|||.. +....+|||.+|++ |++...|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 999999999999999999999999999999999999999864 4999999999987 78899999999986 68888777
Q ss_pred C
Q 001293 1093 L 1093 (1106)
Q Consensus 1093 ~ 1093 (1106)
.
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 5
No 85
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.2e-39 Score=364.90 Aligned_cols=217 Identities=23% Similarity=0.297 Sum_probs=185.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
|+++|+++.|+.+ .....+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5788888777421 012469999999999999999999999999999999999876 56899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.. ..++.+||++|+..+++..||+||+.|...... .+.++.++.+.++++.++|.+..+.. +.+||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDN---TPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 235689999999999999999999998764332 23445566789999999999887766 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1088 (1106)
||||||++|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999987 57789999999986 6999
Q ss_pred EecCC
Q 001293 1089 YVGPL 1093 (1106)
Q Consensus 1089 ~~g~~ 1093 (1106)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 98885
No 86
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-39 Score=368.56 Aligned_cols=229 Identities=24% Similarity=0.370 Sum_probs=193.4
Q ss_pred cCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCC
Q 001293 110 VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSS 189 (1106)
Q Consensus 110 ~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 189 (1106)
..+..|.-+|+|+|+++++.+ +++||+++||+|++|+-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~~---------------------------------k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYGP---------------------------------KRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeCC---------------------------------CCceecceeEEecCCCEEEEECCCCC
Confidence 466778889999999999832 23499999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHH
Q 001293 190 GKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTEL 266 (1106)
Q Consensus 190 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 266 (1106)
||||+|++|.++++ . +|+|.+||.++++... |+.+|||||+ .++++-||.+||.++. +...++.+.++
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd-~~LFndTIl~NI~YGn----~sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQD-SVLFNDTILYNIKYGN----PSASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCc-ccccchhHHHHhhcCC----CCcCHHHHHHH
Confidence 99999999999998 5 8999999999877654 5789999995 4566679999999985 33445666666
Q ss_pred HHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCccce
Q 001293 267 ARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALF 346 (1106)
Q Consensus 267 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vll 346 (1106)
|++...+ |. +..|++.++|.||+++.. |||||||||++|||++.+|+|++
T Consensus 461 ~k~a~~h--------------------------d~---i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGLH--------------------------DV---ISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCcH--------------------------HH---HHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 6654321 11 346899999999998875 99999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChHHHHH
Q 001293 347 MDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 347 LDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1106)
+|||||+||+.|...|++.+... ..++|+|+.+ |+ ..+..-||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~Iv-H~-l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMIV-HR-LDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEEE-ec-chhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999873 2456666654 43 46788999999999999999999999976
No 87
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=8.3e-39 Score=368.18 Aligned_cols=205 Identities=27% Similarity=0.374 Sum_probs=177.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|+.+++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.+||.+||+
T Consensus 28 ~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 104 (375)
T PRK09452 28 EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVF 104 (375)
T ss_pred EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998865544 47899999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+.+.++... .+.+..++++++.+||++..+..+ ..|
T Consensus 105 eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~L 145 (375)
T PRK09452 105 ENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQL 145 (375)
T ss_pred HHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hhC
Confidence 99999875432110 011234677899999988777554 579
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+|||||+.+|++||||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 146 SgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i~ 224 (375)
T PRK09452 146 SGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRIE 224 (375)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999987643 455566889999999999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
..|+++++.
T Consensus 225 ~~g~~~~i~ 233 (375)
T PRK09452 225 QDGTPREIY 233 (375)
T ss_pred EEcCHHHHH
Confidence 999999873
No 88
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-39 Score=346.18 Aligned_cols=214 Identities=23% Similarity=0.334 Sum_probs=188.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.+++++|+|+. +..+|+|+|++|++|+.++|+|+||||||||+++|+|... +..|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeecc
Confidence 678999998852 2479999999999999999999999999999999999877 46799999999855
Q ss_pred ----cccccceEEEEccCCCCC-CCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 936 ----QETFARISGYCEQNDIHS-PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 936 ----~~~~~~~~gyv~q~~~~~-~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
...+++.+|||+|+|..+ ..-||.|.+.|+..-. ..+.++.+++++++++.+++.+++++. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 346788999999998764 3569999999986433 345556788899999999999998876 467999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
||||||+||.+|+.+|++|+|||||||||+.+++.+++.++++..+ |.|||++|||.+ .+.+++|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 689999999997 58888999999987 58999
Q ss_pred ecCC
Q 001293 1090 VGPL 1093 (1106)
Q Consensus 1090 ~g~~ 1093 (1106)
+|+.
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9974
No 89
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.1e-38 Score=360.02 Aligned_cols=205 Identities=27% Similarity=0.406 Sum_probs=177.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc--ccceEEEEcCCCCCCCCCCH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1106)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+||
T Consensus 21 ~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 97 (306)
T PRK13537 21 LVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTV 97 (306)
T ss_pred EEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcH
Confidence 5999999999999999999999999999999999999998 999999999875432 24679999999999999999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+||+.|.+++.+.... +....++.+++.+||.+.+++.++ .
T Consensus 98 ~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~ 138 (306)
T PRK13537 98 RENLLVFGRYFGLSAA----------------------------------AARALVPPLLEFAKLENKADAKVG-----E 138 (306)
T ss_pred HHHHHHHHHHcCCCHH----------------------------------HHHHHHHHHHHHcCCchHhcCchh-----h
Confidence 9999986655432100 011235678899999988887765 5
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++.. . +++|+.++|...++.++||+|++|++|++
T Consensus 139 LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~i 216 (306)
T PRK13537 139 LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGRK 216 (306)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999753 3 45566678889999999999999999999
Q ss_pred EEEcChHHHHH
Q 001293 404 VYQGPRELVLE 414 (1106)
Q Consensus 404 v~~G~~~~~~~ 414 (1106)
++.|+++++..
T Consensus 217 ~~~g~~~~l~~ 227 (306)
T PRK13537 217 IAEGAPHALIE 227 (306)
T ss_pred EEECCHHHHHh
Confidence 99999998754
No 90
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-39 Score=348.72 Aligned_cols=214 Identities=24% Similarity=0.349 Sum_probs=180.4
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.|+ +..+|+|+||+|++|+++||+||||||||||+++|+|... +..|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5677877663 2469999999999999999999999999999999999876 468999999987543
Q ss_pred ------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 937 ------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
..+++.++|++|++.+++.+||+||+.+...... ....+...+.+.++++.+++.+..++. +..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLY-----PAELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCH
Confidence 2345679999999988888999999988643221 123344456688899999998776665 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 57788999999986 68888
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 218 ~g~~~ 222 (235)
T cd03261 218 EGTPE 222 (235)
T ss_pred ecCHH
Confidence 88754
No 91
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-39 Score=333.22 Aligned_cols=205 Identities=27% Similarity=0.333 Sum_probs=177.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc----ccceEEEEcCCC--CCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHD--NHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 239 (1106)
++|+|||++|.+||.++|+|+||||||||.++|+|+.+|+ +|+|+++|.+..... ..+.+-+|+||+ .+.|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 6999999999999999999999999999999999999998 999999998765542 357899999996 5789
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
..||++.|.-+.+..+... ....+.++|+.+||+...- ++
T Consensus 98 ~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFL----DR 137 (252)
T ss_pred chhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHH----hc
Confidence 9999999987765433211 1112567899999985432 45
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
.+.+|||||||||+|||||+.+|++|++|||||+||++.+.+|++.|.++.+ .++.+++.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeeee
Confidence 6678999999999999999999999999999999999999999999998865 556677779999999999999999999
Q ss_pred CCeEEEEcChHHHHH
Q 001293 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999999864
No 92
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-39 Score=401.19 Aligned_cols=258 Identities=23% Similarity=0.391 Sum_probs=209.7
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCC--CcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL--PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1106)
...++....+++++++..+. +... +..+... -..+|+|+||++.|+
T Consensus 951 ~~ka~~Aa~~iF~i~dr~~~-----i~~~-~~~~~~~~~~~G~I~~~~V~F~YP-------------------------- 998 (1228)
T KOG0055|consen 951 ISKAKIAAGSIFEILDRKPT-----IDPD-STSGGKLPNVKGDIEFRNVSFAYP-------------------------- 998 (1228)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----CCCC-CCCCCccccceeEEEEeeeEeeCC--------------------------
Confidence 34567777888888877663 1111 1234323 356799999999983
Q ss_pred hhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEc
Q 001293 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1106)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 232 (1106)
++ +..+||+|+|++|++|+.+||+|||||||||...+|-++++|+ +|.|.+||++++.++. |+++|.|+
T Consensus 999 ----sR-P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVs 1070 (1228)
T KOG0055|consen 999 ----TR-PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVS 1070 (1228)
T ss_pred ----CC-CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceec
Confidence 22 4567999999999999999999999999999999999999998 9999999999988876 47899999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 001293 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1106)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1106)
|+|.+|. .|+||||.|+. .. -..+.+.++++...++++ +.+|++.+
T Consensus 1071 QEP~LF~-~TIrENI~YG~--~~--vs~~eIi~Aak~ANaH~F-----------------------------I~sLP~Gy 1116 (1228)
T KOG0055|consen 1071 QEPVLFN-GTIRENIAYGS--EE--VSEEEIIEAAKLANAHNF-----------------------------ISSLPQGY 1116 (1228)
T ss_pred cCchhhc-ccHHHHHhccC--CC--CCHHHHHHHHHHhhhHHH-----------------------------HhcCcCcc
Confidence 9997775 69999999982 11 233444455444433222 56899999
Q ss_pred ccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhc
Q 001293 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1106)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1106)
||.||+++. +||||||||++||||+++||+||||||.||+||+++.+.+.+.|.+.. .++|+|+.. |+..+.+.+
T Consensus 1117 DT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIA--HRLSTIqna 1191 (1228)
T KOG0055|consen 1117 DTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIA--HRLSTIQNA 1191 (1228)
T ss_pred cCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEe--cchhhhhcC
Confidence 999999887 699999999999999999999999999999999999999999999854 345555543 467899999
Q ss_pred CeEEEEcCCeEEEEcChHHHHH
Q 001293 393 DDIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~~ 414 (1106)
|.|+|+++|+|+++|+++++++
T Consensus 1192 D~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1192 DVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred CEEEEEECCEEEecccHHHHHh
Confidence 9999999999999999999975
No 93
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.7e-38 Score=383.04 Aligned_cols=218 Identities=28% Similarity=0.440 Sum_probs=182.5
Q ss_pred ccCCCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEE
Q 001293 848 VLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNI 927 (1106)
Q Consensus 848 ~~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i 927 (1106)
..|.-++.++|+||+|+|+.. +..+|+|+|++|+|||.+||+|+||||||||+|+|.|... +..|+|
T Consensus 464 ~~~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I 530 (709)
T COG2274 464 HLPKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRI 530 (709)
T ss_pred cccccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceE
Confidence 345556789999999999732 2369999999999999999999999999999999999876 579999
Q ss_pred EEcCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccc-------
Q 001293 928 TISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ------- 997 (1106)
Q Consensus 928 ~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~------- 997 (1106)
.+||+|+.+ ..+++++|||+|++.++. -|++||+.++. ++.+. +.+.++++..+..++..
T Consensus 531 ~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~----e~i~~A~~~ag~~~fI~~lP~gy~ 600 (709)
T COG2274 531 LLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATD----EEIIEAAQLAGAHEFIENLPMGYD 600 (709)
T ss_pred EECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCH----HHHHHHHHHhCcHHHHHhcccccc
Confidence 999998654 568899999999988764 69999999753 23332 33556666666554333
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCe
Q 001293 998 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1077 (1106)
Q Consensus 998 ~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~ 1077 (1106)
..+|. ++.+||||||||++|||||+.+|+||+||||||+||+++++.|++.|.+.. +|+|+|+++|+++ .++.||+
T Consensus 601 t~v~E-~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adr 676 (709)
T COG2274 601 TPVGE-GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADR 676 (709)
T ss_pred ccccc-CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccE
Confidence 33443 456899999999999999999999999999999999999999999999985 5899999999986 6789999
Q ss_pred EEEEecCCEEEEecCC
Q 001293 1078 LFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1078 v~~l~~Gg~~~~~g~~ 1093 (1106)
+++|++ |+++..|+.
T Consensus 677 IiVl~~-Gkiv~~gs~ 691 (709)
T COG2274 677 IIVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEEccC-CceeccCCH
Confidence 999986 699999984
No 94
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.8e-39 Score=318.73 Aligned_cols=200 Identities=27% Similarity=0.396 Sum_probs=174.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
..+|+|||+.|++||++.|+||||||||||||+|.+...|+ +|+|.+||+++.... .+|++|+|+|+.-++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 45999999999999999999999999999999999999999 999999999986543 258999999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+..||+||++|+.+..|... .+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999988766322 12344677889999999887744
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+.+|||||+|||+||||++.+|++|+.||||-+||+..+..|++.+.++.+ . +|+|+..+|+..-+..+--+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~-GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-L-GTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-c-CcEEEEEeccHHHHHhccCcEEEE
Confidence 457999999999999999999999999999999999999999999998754 3 566666788888888888899999
Q ss_pred cCCeEEEEcC
Q 001293 399 SDGQIVYQGP 408 (1106)
Q Consensus 399 ~~G~iv~~G~ 408 (1106)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 95
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-39 Score=343.41 Aligned_cols=207 Identities=29% Similarity=0.418 Sum_probs=180.3
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCC----CCcccceEEEEcCCC-CCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----EFVPQRTAAYISQHD-NHIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1106)
..+|+|+|+.|++|+.++|+||||||||||+++|+|++.|+ +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 45999999999999999999999999999999999999998 999999999865 233468899999995 5678
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.-||.|.++|+....+.... +...+++.+++.+||.+.++.
T Consensus 94 ~~tV~~evafg~~n~g~~~~----------------------------------e~~~rv~~~l~~vgl~~~~~r----- 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE----------------------------------EIEERVAEALELVGLEELLDR----- 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH----------------------------------HHHHHHHHHHHHcCchhhccC-----
Confidence 88999999999877664211 123467888999999988764
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
.+..|||||||||+||.+|+.+|++|+|||||||||+..+..+++.++++.. .++.++|.++|+...+..++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999999876 444555568899999999999999999
Q ss_pred CCeEEEEcChHHHHH
Q 001293 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999887754
No 96
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=364.38 Aligned_cols=215 Identities=24% Similarity=0.344 Sum_probs=185.9
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|++..++ ++..+|+|+||++++|++++|+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67888887762 12469999999999999999999999999999999999876 56899999998764
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 936 ~~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
.. ..+|.+|||+|++.++|.+||+||+.|+...+. .+.++....++++++.++|.++.++. +.+|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIRG---MPKAEIEERVAEAARILELEPLLDRK-----PRELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHH
Confidence 32 234789999999999999999999999864332 33445556789999999999888876 3579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|+|++|||+. ++.+.+|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 899999999986 68899999999986 689988875
Q ss_pred C
Q 001293 1094 G 1094 (1106)
Q Consensus 1094 g 1094 (1106)
.
T Consensus 220 ~ 220 (356)
T PRK11650 220 V 220 (356)
T ss_pred H
Confidence 3
No 97
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.9e-38 Score=363.53 Aligned_cols=213 Identities=25% Similarity=0.367 Sum_probs=186.9
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|++..++ +..+|+|+||++++|++++|+|||||||||||++|+|... +..|+|.++|.+..
T Consensus 5 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~ 69 (353)
T TIGR03265 5 LSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDIT 69 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 77889887764 2468999999999999999999999999999999999876 56899999998764
Q ss_pred c-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 936 Q-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 936 ~-~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+.++.+..++++++.++|.++.++. +.+|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~Q 141 (353)
T TIGR03265 70 RLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQQ 141 (353)
T ss_pred CCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHHH
Confidence 3 234578999999999999999999999986543 233455667799999999999988876 4679999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||+|||||+.+|++|+|||||++||+.++..+++.|+++.++ |.|+|++|||++ ++...+|++++|++ |++++.|+.
T Consensus 142 RvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~~ 219 (353)
T TIGR03265 142 RVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGTP 219 (353)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999998764 899999999997 68899999999986 589999875
No 98
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-37 Score=363.66 Aligned_cols=220 Identities=27% Similarity=0.449 Sum_probs=184.3
Q ss_pred CcccC-CCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeee
Q 001293 846 GMVLP-FEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT 924 (1106)
Q Consensus 846 ~~~~p-~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~ 924 (1106)
|...| .-.+.|+|+||+|.||..| +.++|+|+||+|+|||.||||||||+||||+.++|..... |..
T Consensus 455 G~~~p~~~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--Pts 522 (716)
T KOG0058|consen 455 GTLAPDHLQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTS 522 (716)
T ss_pred CccccccccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCC
Confidence 43344 3457899999999999764 4679999999999999999999999999999999997655 679
Q ss_pred eEEEEcCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHc-------CCcc
Q 001293 925 GNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-------ELNP 994 (1106)
Q Consensus 925 G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~-------~l~~ 994 (1106)
|+|.+||+|+++ ..+++++|+|.|+|.++. -||+|||.|+.. ..+.++ ++.+.+.. ++.+
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~----i~~AAk~ANah~FI~~~p~ 592 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEE----IEAAAKMANAHEFITNFPD 592 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHH----HHHHHHHhChHHHHHhCcc
Confidence 999999999765 467899999999999875 699999999853 233332 22222222 3445
Q ss_pred ccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHh
Q 001293 995 LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA 1074 (1106)
Q Consensus 995 ~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~ 1074 (1106)
-.++.+|..| .+||||||||++|||||++||+||||||+||+||+++...|+++|.+..+ ++|||+++|++| ..+.
T Consensus 593 gY~T~VGEkG-~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~ 668 (716)
T KOG0058|consen 593 GYNTVVGEKG-SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRH 668 (716)
T ss_pred ccccccCCcc-ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--Hhhh
Confidence 5778888876 47999999999999999999999999999999999999999999998865 699999999986 6788
Q ss_pred cCeEEEEecCCEEEEecC
Q 001293 1075 FDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1075 ~D~v~~l~~Gg~~~~~g~ 1092 (1106)
+|+|+++++ |+++..|.
T Consensus 669 Ad~Ivvi~~-G~V~E~G~ 685 (716)
T KOG0058|consen 669 ADQIVVIDK-GRVVEMGT 685 (716)
T ss_pred ccEEEEEcC-CeEEeccc
Confidence 999999986 69999885
No 99
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-38 Score=345.30 Aligned_cols=206 Identities=30% Similarity=0.391 Sum_probs=172.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.+++
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 14 TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4999999999999999999999999999999999999998 999999998875432 2457999999998999
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.++......... .+....++.+++.+||++..++.+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (235)
T cd03261 91 SLTVFENVAFPLREHTRLSE---------------------------------EEIREIVLEKLEAVGLRGAEDLYP--- 134 (235)
T ss_pred CCcHHHHHHHHHhhccCCCH---------------------------------HHHHHHHHHHHHHcCCchhhcCCh---
Confidence 99999999987532110000 001123566788999987666554
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||+||+.+|++++|||||+|||+.++..+++.|+++.... +++|+.++|+..++.++||+|++|+
T Consensus 135 --~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~vsH~~~~~~~~~d~v~~l~ 211 (235)
T cd03261 135 --AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKEL-GLTSIMVTHDLDTAFAIADRIAVLY 211 (235)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhcCEEEEEE
Confidence 4699999999999999999999999999999999999999999999876532 4455557788889999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (235)
T cd03261 212 DGKIVAEGTPEELR 225 (235)
T ss_pred CCeEEEecCHHHHc
Confidence 99999999988753
No 100
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=362.36 Aligned_cols=209 Identities=28% Similarity=0.391 Sum_probs=177.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|+++|+++....+ ++.++||+|++.+++.+||+
T Consensus 16 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 16 QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998865443 36799999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+.+....... .. ..+....++.+++.+||++..|.. +..|
T Consensus 93 eni~~~~~~~~~~~~---~~---------------------------~~~~~~~~~~~l~~~~L~~~~~~~-----~~~L 137 (353)
T PRK10851 93 DNIAFGLTVLPRRER---PN---------------------------AAAIKAKVTQLLEMVQLAHLADRY-----PAQL 137 (353)
T ss_pred HHHHhhhhhcccccC---CC---------------------------HHHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 999998653210000 00 001123467789999998777654 4579
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ..+.+++.++|+..++..++|+|++|++|+++
T Consensus 138 SgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~ 216 (353)
T PRK10851 138 SGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNIE 216 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998865 33455666889999999999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
+.|+++++.
T Consensus 217 ~~g~~~~i~ 225 (353)
T PRK10851 217 QAGTPDQVW 225 (353)
T ss_pred EEcCHHHHH
Confidence 999999874
No 101
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2e-38 Score=362.59 Aligned_cols=208 Identities=21% Similarity=0.306 Sum_probs=179.0
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1106)
.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 345999999999999999999999999999999999999998 9999999999876543 468999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
+++.+||+||+.|+.+..+... .+....+.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999876543211 011234667899999987776554
Q ss_pred ccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++..++|+|+
T Consensus 128 -----~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~-~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 -----DELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATL-QKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred -----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4699999999999999999999999999999999999999999999875533 4455668889999999999999
Q ss_pred EEcCCeEEEEcChHHHHH
Q 001293 397 LLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1106)
+|.+|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 102
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.8e-38 Score=360.31 Aligned_cols=215 Identities=27% Similarity=0.379 Sum_probs=186.1
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|++..|+ +..+|+||||+|++|+++||+||||||||||+++|+|... +..|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEEC
Confidence 488899988774 3469999999999999999999999999999999999876 4689999999886
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 935 ~~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
.. ...++.+||++|++.+++.+|+.||+.|.+..+. .+..+..+.++++++.++|.+..+..+ .+||+||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHH
Confidence 43 2346779999999999999999999987654432 223334456778999999988777663 5799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||++||+||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999877999999999997 68889999999986 58999998
Q ss_pred CC
Q 001293 1093 LG 1094 (1106)
Q Consensus 1093 ~g 1094 (1106)
..
T Consensus 256 ~~ 257 (340)
T PRK13536 256 PH 257 (340)
T ss_pred HH
Confidence 64
No 103
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=361.41 Aligned_cols=215 Identities=24% Similarity=0.373 Sum_probs=187.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ +..+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478899987764 2468999999999999999999999999999999999876 5689999999876
Q ss_pred Ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 935 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 935 ~~~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
... ..+|.+|||+|++.++|.+||+||+.|+...+. .+..+.++.++++++.++|.++.++. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 542 234789999999999999999999999865432 33455667889999999999888776 357999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|+|++|||++ ++.+.+|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998754 899999999997 68899999999986 58888887
Q ss_pred CC
Q 001293 1093 LG 1094 (1106)
Q Consensus 1093 ~g 1094 (1106)
..
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 53
No 104
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-40 Score=360.34 Aligned_cols=257 Identities=21% Similarity=0.355 Sum_probs=214.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.|..-.-+|++++++++++| +.+......+..++..|.|+|+++.+++
T Consensus 502 iQ~nfiDmEnmfdllkee~e-----Vvd~P~a~pl~~~~G~i~fsnvtF~Y~p--------------------------- 549 (790)
T KOG0056|consen 502 IQKNFIDMENMFDLLKEEPE-----VVDLPGAPPLKVTQGKIEFSNVTFAYDP--------------------------- 549 (790)
T ss_pred HHHhhhhHHHHHHHhhcCch-----hhcCCCCCCccccCCeEEEEEeEEecCC---------------------------
Confidence 45556667899999999988 7887777788889999999999999853
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC---cccceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF---VPQRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~---~~~~~~~yv~Q~ 234 (1106)
.+++|+||||++.||+.+||+||||+||||++++|.++++.+ +|.|+++|++++.. ..++.||.|||+
T Consensus 550 ------~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQD 620 (790)
T KOG0056|consen 550 ------GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQD 620 (790)
T ss_pred ------CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCc
Confidence 245999999999999999999999999999999999999988 99999999998653 346789999996
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
..+| +.|+..||.|+. ++...|.+.++++.. + +.| +++++++.++|
T Consensus 621 tvLF-NdTI~yNIryak----~~AsneevyaAAkAA---~-----------------------IHd---rIl~fPegY~t 666 (790)
T KOG0056|consen 621 TVLF-NDTILYNIRYAK----PSASNEEVYAAAKAA---Q-----------------------IHD---RILQFPEGYNT 666 (790)
T ss_pred ceee-cceeeeheeecC----CCCChHHHHHHHHHh---h-----------------------HHH---HHhcCchhhhh
Confidence 6555 569999999874 333333333332221 1 112 37899999999
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
+||+++.+ |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|+|+.. |+..+.-.+|.
T Consensus 667 ~VGERGLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA--HRLSTivnAD~ 741 (790)
T KOG0056|consen 667 RVGERGLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA--HRLSTIVNADL 741 (790)
T ss_pred hhhhcccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe--eeehheecccE
Confidence 99999997 999999999999999999999999999999999999999999999874 45555543 35667788999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|+++++|+|++.|.++|++.
T Consensus 742 ILvi~~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 742 ILVISNGRIVERGRHEELLK 761 (790)
T ss_pred EEEEeCCeEeecCcHHHHHh
Confidence 99999999999999999875
No 105
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=6.4e-39 Score=314.85 Aligned_cols=201 Identities=24% Similarity=0.380 Sum_probs=173.4
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHHHHHH
Q 001293 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1106)
.+++.|++||++||+|||||||||||++|+|+..|. +|+|++||.+.....| +|-++.++|+.++|..+||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478899999999999999999999999999999998 9999999999877665 478999999999999999999999
Q ss_pred HHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhh
Q 001293 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1106)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1106)
++.. ++-+.. . +.+..++.++..+||..+.+... .+|||||
T Consensus 94 LGl~---P~LkL~----a---------------------------~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKLN----A---------------------------EQREKVEAAAAQVGLAGFLKRLP-----GELSGGQ 134 (231)
T ss_pred ccCC---cccccC----H---------------------------HHHHHHHHHHHHhChhhHhhhCc-----cccCchH
Confidence 8753 221100 0 11234677889999999887654 4699999
Q ss_pred hHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcC
Q 001293 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1106)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1106)
||||++||+|+++-+||+||||+|+||+.-+.++...+.+++.+.+.|+++ ++|+.+++.+.+|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999998766556555 5666789999999999999999999999
Q ss_pred hHHHH
Q 001293 409 RELVL 413 (1106)
Q Consensus 409 ~~~~~ 413 (1106)
.+++.
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 98764
No 106
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-38 Score=363.06 Aligned_cols=205 Identities=24% Similarity=0.330 Sum_probs=177.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ +|.+|||+|++.+|+.+||+
T Consensus 33 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 109 (377)
T PRK11607 33 HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVE 109 (377)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998765443 47899999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+.+.++... .+....++++++.+||.+..+.. +.+|
T Consensus 110 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~-----~~~L 150 (377)
T PRK11607 110 QNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRK-----PHQL 150 (377)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999875432110 01123467789999998766644 4579
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+|||||+.+|++|||||||++||..++..+.+.|+++.+..+ .+++.++|+..++..++|+|++|++|+++
T Consensus 151 SgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i~ 229 (377)
T PRK11607 151 SGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKFV 229 (377)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999988765444 55666788999999999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
..|+++++.
T Consensus 230 ~~g~~~~~~ 238 (377)
T PRK11607 230 QIGEPEEIY 238 (377)
T ss_pred EEcCHHHHH
Confidence 999999874
No 107
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-38 Score=340.08 Aligned_cols=210 Identities=28% Similarity=0.394 Sum_probs=176.2
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|... +..|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4677777663 2469999999999999999999999999999999999765 468999999987643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 001293 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1106)
Q Consensus 937 ~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqr 1015 (1106)
. ..++.++|++|++.+++.+|++||+.+...... ...+..++.++++++.+++.+..+.. +..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRY-----PHELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHHHH
Confidence 2 234579999999988888999999988643321 22333445678899999998776665 35799999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1016 l~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
++|||||+.+|++|||||||+|||+.++..+++.|+++++ .|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999987 57888999999987 5777654
No 108
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.3e-38 Score=361.96 Aligned_cols=214 Identities=24% Similarity=0.334 Sum_probs=186.6
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeee--eEEEEcCc
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNITISGY 932 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 932 (1106)
.++++|++++|+ +..+|+|+|++|++|++++|+|||||||||||++|+|... +.. |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 578899988774 2469999999999999999999999999999999999876 457 99999998
Q ss_pred cCCc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 933 PKKQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 933 ~~~~-~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
+... ...+|.+||++|++.++|.+||+||+.|+...+ ....+..+..++++++.++|.++.++. +.+||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~-----~~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHL-----PAQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCC-----hhhCCHH
Confidence 7643 224577999999999999999999999986543 234455566789999999999888876 4579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||+|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999998876 799999999987 68889999999986 68988
Q ss_pred ecCC
Q 001293 1090 VGPL 1093 (1106)
Q Consensus 1090 ~g~~ 1093 (1106)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 8874
No 109
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.8e-38 Score=340.53 Aligned_cols=207 Identities=23% Similarity=0.317 Sum_probs=174.9
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.|+. +.+.+|+|+|++|++|+++||+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 567888877641 12369999999999999999999999999999999999865 46899999998753
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.. .+++.++|++|++.+++.+||.||+.+....+. ...+..++.++++++.+++.+..+.. +.+||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHAL-----PMQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCC
Confidence 21 245679999999988888999999998754322 22333455688999999998877665 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++|
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~G 214 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSRG 214 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999998777999999999987 577789999999875
No 110
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=6.3e-36 Score=393.03 Aligned_cols=216 Identities=22% Similarity=0.358 Sum_probs=185.9
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
..++++|++..++. +++.+|+|||+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 36888999877631 23569999999999999999999999999999999999876 568999999988
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 934 ~~~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.++.++++++.++|.+..++. +.+||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~-----~~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEE-----AQDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHH
Confidence 643 2345679999999999999999999999876543 22334456688999999998887776 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
|||||+||+||+.+|+||||||||+|||+.+++.+++.|+++. +|+|||++||+++ ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999985 6999999999987 57788999999986 5888888
Q ss_pred CC
Q 001293 1092 PL 1093 (1106)
Q Consensus 1092 ~~ 1093 (1106)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 63
No 111
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=8.8e-38 Score=349.98 Aligned_cols=205 Identities=20% Similarity=0.245 Sum_probs=154.5
Q ss_pred CCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcC
Q 001293 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1106)
Q Consensus 852 ~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 931 (1106)
.|-.+.+.+|.+.|+.. .-+++.+++..++.-..++++|+||+||||+++++.|..+ +..|-+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 44568888998877521 1158899999999999999999999999999999998654 3567666543
Q ss_pred ccCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCCCH
Q 001293 932 YPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 932 ~~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~~~LSg 1010 (1106)
++.++|..|...-+..+.|.+-- +-...+ +... .+.++..+..+||.. ++.. + +.+|||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~vd-~~~~~~--pG~~----~ee~r~hl~~~Gl~g~la~~----s-i~~LSG 485 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNAVD-FMEKSF--PGKT----EEEIRRHLGSFGLSGELALQ----S-IASLSG 485 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHHHH-HHHHhC--CCCC----HHHHHHHHHhcCCCchhhhc----c-ccccCC
Confidence 34688999975433333443222 222222 2222 234677888899864 2222 1 567999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
|||-||++|.....+|.+|+|||||+.||..+-..+-+.|++. +..||+||||.++ +-..|+++++.++|.-.-..
T Consensus 486 GQKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ie 561 (582)
T KOG0062|consen 486 GQKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIE 561 (582)
T ss_pred cchhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeee
Confidence 9999999999999999999999999999999999999999875 5689999999875 78899999999987666555
Q ss_pred cCC
Q 001293 1091 GPL 1093 (1106)
Q Consensus 1091 g~~ 1093 (1106)
|..
T Consensus 562 g~~ 564 (582)
T KOG0062|consen 562 GGI 564 (582)
T ss_pred ccH
Confidence 654
No 112
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-38 Score=362.94 Aligned_cols=205 Identities=26% Similarity=0.387 Sum_probs=175.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||+
T Consensus 17 ~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~ 93 (369)
T PRK11000 17 VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVA 93 (369)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999998765433 46799999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+.+..+... .+....++.+++.+||++..+..+ ..|
T Consensus 94 eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~L 134 (369)
T PRK11000 94 ENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KAL 134 (369)
T ss_pred HHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hhC
Confidence 99999865432110 001224567899999987776554 469
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. ++++|.++|+..++..+||+|++|++|+++
T Consensus 135 SgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~ 213 (369)
T PRK11000 135 SGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVA 213 (369)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 445556788889999999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
..|+++++.
T Consensus 214 ~~g~~~~i~ 222 (369)
T PRK11000 214 QVGKPLELY 222 (369)
T ss_pred EEcCHHHHH
Confidence 999998874
No 113
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-38 Score=338.61 Aligned_cols=215 Identities=24% Similarity=0.362 Sum_probs=179.1
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.|+.. .....+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc
Confidence 467777666411 011469999999999999999999999999999999999865 468999999987642
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHH
Q 001293 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1106)
Q Consensus 937 ~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl 1016 (1106)
.++.++|++|++.+++.+|++||+.+....+. ...+...+.++++++.+++.+..+.. +..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAY-----PHQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----cccCCHHHHHHH
Confidence 35679999999988888999999988754332 22333456688999999998776665 357999999999
Q ss_pred HHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEec-CCEEEEecCC
Q 001293 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1093 (1106)
Q Consensus 1017 ~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-Gg~~~~~g~~ 1093 (1106)
+|||||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.||++++|++ .|+++..+++
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999864 4899999999987 57788999999996 4789887765
No 114
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.4e-38 Score=355.50 Aligned_cols=202 Identities=27% Similarity=0.379 Sum_probs=176.1
Q ss_pred ceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc--ccccceEEEEccCCCCCCCCC
Q 001293 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVT 957 (1106)
Q Consensus 880 ~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~~t 957 (1106)
+..+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 3579999999999999999999999999999999999876 568999999987643 234567999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCC
Q 001293 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1106)
Q Consensus 958 v~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsg 1037 (1106)
|+||+.+.+.++. ......++.++++++.++|.+..+.. +..||||||||++||+||+.+|++|||||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRP-----VGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765442 22333455688999999998877765 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1038 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999987 68889999999986 689998875
No 115
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6e-38 Score=359.43 Aligned_cols=216 Identities=25% Similarity=0.382 Sum_probs=185.2
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ +..+|+|+||+|++||+++|+||||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 66788877663 2469999999999999999999999999999999999876 46899999998764
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCC-CCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 936 ~~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
.. ..++.+|||+|++.++|.+||+||+.|+...+.. ...+.++.++.+.++++.++|.++.++. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 32 3346799999999999999999999997643211 1233445566789999999998887776 457999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|+|++|||++ ++.+.+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999997 68899999999986 68999887
Q ss_pred C
Q 001293 1093 L 1093 (1106)
Q Consensus 1093 ~ 1093 (1106)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 4
No 116
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-38 Score=324.04 Aligned_cols=206 Identities=24% Similarity=0.397 Sum_probs=172.5
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc----ceEEEEcCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~~ 240 (1106)
.++|+|||+.+++||+++|+||||+||||||++|+|..++. +|+|.++|.++....+. +-++||||....|++
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 56999999999999999999999999999999999999987 99999999999887653 568999999999999
Q ss_pred CCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC-Cccccccccccc
Q 001293 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1106)
|||+|||..++..... .. . ... ..|.+.+.+- |.+..+..-|
T Consensus 93 LTVeENL~~g~~~~~~-~~----------~------~~~------------------~~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRD-KE----------A------QER------------------DLEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhcccc-cc----------c------ccc------------------cHHHHHHHChhHHHHhcCccc--
Confidence 9999999987643211 00 0 000 0223333332 3444444444
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
.|||||||-++|||||+.+|++|+|||||.||-|.-..+|.+.++++.+ ..+.+|+.+.|+...+.+.+|+.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~-~~g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRK-EGGMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHH-cCCcEEEEEeccHHHHHHhhCEEEEEe
Confidence 5999999999999999999999999999999999999999999999875 345677779999999999999999999
Q ss_pred CCeEEEEcChHHHHH
Q 001293 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|+|++.|+.+++.+
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998853
No 117
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-38 Score=335.79 Aligned_cols=209 Identities=24% Similarity=0.417 Sum_probs=176.7
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ ++.+|+|+||++++|++++|+|+||||||||+++|+|... +..|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 4677776653 2469999999999999999999999999999999999765 468999999987643
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHH
Q 001293 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1106)
Q Consensus 937 ~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl 1016 (1106)
..++.++|++|++.+++.+|++||+.+....+. .......+.+.++++.+++.+..+.. +.+||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHH
Confidence 345679999999988888999999988654432 22233445678899999998766654 357999999999
Q ss_pred HHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1017 ~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
+||++|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998777899999999987 57788999999986 5777654
No 118
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=357.56 Aligned_cols=206 Identities=27% Similarity=0.374 Sum_probs=175.5
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc------cceEEEEcCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 46999999999999999999999999999999999999998 9999999998765432 35799999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.|+....+... .+....++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998765432110 001123567889999987776554
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999886533 455566788888999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 119
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.7e-38 Score=353.71 Aligned_cols=215 Identities=27% Similarity=0.369 Sum_probs=182.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ +..+|+||||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 377888887764 2469999999999999999999999999999999999875 4689999999875
Q ss_pred Cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 935 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 935 ~~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
.. ...++.+||++|++.+++.+||+||+.+.+..+. .+.+...+.++++++.+++.+..+.. +..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~-----~~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVR-----VALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCc-----hhhCCHHH
Confidence 32 2345679999999988889999999987554321 22333345677899999998777765 35799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999997 57889999999986 68999887
Q ss_pred CC
Q 001293 1093 LG 1094 (1106)
Q Consensus 1093 ~g 1094 (1106)
..
T Consensus 219 ~~ 220 (303)
T TIGR01288 219 PH 220 (303)
T ss_pred HH
Confidence 54
No 120
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-38 Score=337.54 Aligned_cols=212 Identities=29% Similarity=0.377 Sum_probs=179.2
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ +..+|+|+||+|++|+++||+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCc
Confidence 5677777663 2469999999999999999999999999999999999865 468999999976532
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 937 --~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
...++.++|++|++.+++.+||+|++.+....+. ...++..+.++++++.+++.+..+.. +..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRL-----VKTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhCCHHHHH
Confidence 2345679999999988888999999988754332 22333445688999999998776665 3579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999998776 899999999987 57888999999986 588888764
No 121
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.6e-38 Score=390.51 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=203.1
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.+......||+.+++++.++ +.+.... ...+..+++|+|+++.++.
T Consensus 295 ~~~~~~a~~ri~~~l~~~~~-----~~~~~~~--~~~~~~~I~f~~vsf~y~~--------------------------- 340 (567)
T COG1132 295 LQRASAAAERLFELLDEEPE-----VEDPPDP--LKDTIGSIEFENVSFSYPG--------------------------- 340 (567)
T ss_pred HHHHHHHHHHHHHHHcCCcc-----ccCCCCC--CCCCCCeEEEEEEEEEcCC---------------------------
Confidence 55778888999988887554 2222111 3345577999999999842
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
++++|+|+|+.++|||.+||+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 341 ------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 341 ------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred ------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 235999999999999999999999999999999999999998 9999999999887654 5789999997
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.+|. .||+|||.++.. ....+.+.++++... .... +..|++++||
T Consensus 412 ~~LF~-~TI~~NI~~g~~----~at~eei~~a~k~a~---------------------------~~d~--I~~lp~g~dt 457 (567)
T COG1132 412 PLLFS-GTIRENIALGRP----DATDEEIEEALKLAN---------------------------AHEF--IANLPDGYDT 457 (567)
T ss_pred ceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhC---------------------------hHHH--HHhCcccccc
Confidence 65555 899999999752 122233444433321 1111 2346889999
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.||+++. .||||||||++||||++.+|++|+||||||+||+.+...|.+.++++. .++|+++ +.|.. .+...+|+
T Consensus 458 ~vge~G~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRl-sti~~aD~ 532 (567)
T COG1132 458 IVGERGV-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRL-STIKNADR 532 (567)
T ss_pred eecCCCc-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccH-hHHHhCCE
Confidence 9997655 599999999999999999999999999999999999999999998764 3457766 55554 55555999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|++++.|++++++.
T Consensus 533 IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 533 IIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred EEEEECCEEEEecCHHHHHH
Confidence 99999999999999999876
No 122
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.2e-38 Score=389.91 Aligned_cols=255 Identities=23% Similarity=0.340 Sum_probs=194.4
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCC-CcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL-PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1106)
.++.+...+|+.++++.+++. ........+. ...+|+|+||++.+..
T Consensus 314 ~~~~~~~~~ri~~~l~~~~~~------~~~~~~~~~~~~~~~i~~~~vsf~~~~-------------------------- 361 (588)
T PRK11174 314 KAQAVGAAESLVTFLETPLAH------PQQGEKELASNDPVTIEAEDLEILSPD-------------------------- 361 (588)
T ss_pred HHHHHHHHHHHHHHHcCCCcc------cCCCccccCCCCCceEEEEeeEEeccC--------------------------
Confidence 467777888888887665431 0000111111 1346999999976421
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcC
Q 001293 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1106)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1106)
++++|+|+|++|+||+.++|+||||||||||+++|+|++ |+ +|+|++||+++++... ++.++||+|
T Consensus 362 -------~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q 430 (588)
T PRK11174 362 -------GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQ 430 (588)
T ss_pred -------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecC
Confidence 124999999999999999999999999999999999999 87 9999999999887654 478999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 001293 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1106)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
++.+| +.|++|||.++.. ....+.+.++++... .+.. .-.|++..|
T Consensus 431 ~~~LF-~~TI~eNI~~g~~----~~~~eei~~al~~a~---------------------------l~~~--i~~lp~G~d 476 (588)
T PRK11174 431 NPQLP-HGTLRDNVLLGNP----DASDEQLQQALENAW---------------------------VSEF--LPLLPQGLD 476 (588)
T ss_pred CCcCC-CcCHHHHhhcCCC----CCCHHHHHHHHHHhC---------------------------HHHH--HHhcccccc
Confidence 87555 5799999998631 122222333322211 1111 224778889
Q ss_pred cccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001293 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1106)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1106)
|.||+++. .||||||||++||||++++|+||+||||||+||+.++..|.+.|+++. .++|+|+.. |.. ++...||
T Consensus 477 T~vge~G~-~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiIt-Hrl-~~i~~aD 551 (588)
T PRK11174 477 TPIGDQAA-GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVT-HQL-EDLAQWD 551 (588)
T ss_pred cccccCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEe-cCh-HHHHhCC
Confidence 99998765 699999999999999999999999999999999999999999998763 345666544 443 6678899
Q ss_pred eEEEEcCCeEEEEcChHHHHH
Q 001293 394 DIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1106)
+|++|++|+++++|+++++.+
T Consensus 552 ~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 552 QIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred EEEEEeCCeEeecCCHHHHHh
Confidence 999999999999999999864
No 123
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1e-37 Score=335.50 Aligned_cols=210 Identities=26% Similarity=0.389 Sum_probs=176.6
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 5677877664 2368999999999999999999999999999999999865 468999999987643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 001293 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1106)
Q Consensus 937 ~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqr 1015 (1106)
. ..++.++|++|++.+++..|++||+.+....+. ...++.++.++++++.+++.+..+.. +..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRK-----PKQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCC-----hhhCCHHHHHH
Confidence 2 224579999999988888999999988643321 22334455678899999998777665 35799999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1016 l~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++++|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998764 899999999986 57788999999986 5887765
No 124
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.1e-37 Score=358.85 Aligned_cols=214 Identities=22% Similarity=0.323 Sum_probs=186.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++|+++.++ +..+|+|+||+|++|++++|+|||||||||||++|+|... +..|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478899988774 2468999999999999999999999999999999999876 5689999999876
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 935 ~~-~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
.. ...+|.+||++|++.++|.+||+||+.|+...+. .+..+.++.++++++.++|.++.++. +.+||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----p~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQK---TPAAEITPRVMEALRMVQLEEFAQRK-----PHQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 43 2245789999999999999999999999864332 33444556788999999999888876 457999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|+|++|||+. ++...+|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999987 68899999999986 68988887
Q ss_pred C
Q 001293 1093 L 1093 (1106)
Q Consensus 1093 ~ 1093 (1106)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 4
No 125
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.5e-37 Score=354.29 Aligned_cols=205 Identities=27% Similarity=0.397 Sum_probs=175.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc--ccceEEEEcCCCCCCCCCCH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1106)
.+|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|+++.... .++.+||++|++.+++.+||
T Consensus 55 ~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 131 (340)
T PRK13536 55 AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTV 131 (340)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999999999999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+||+.|.....+.... +....++.+++.+||++..++.++ .
T Consensus 132 ~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~ll~~~~L~~~~~~~~~-----~ 172 (340)
T PRK13536 132 RENLLVFGRYFGMSTR----------------------------------EIEAVIPSLLEFARLESKADARVS-----D 172 (340)
T ss_pred HHHHHHHHHHcCCCHH----------------------------------HHHHHHHHHHHHcCCchhhCCChh-----h
Confidence 9999976544321100 011234567889999988887665 5
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++.++++.|+++.. . +++|+.++|+..++.++||+|++|++|++
T Consensus 173 LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~i 250 (340)
T PRK13536 173 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGRK 250 (340)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999864 3 44566678899999999999999999999
Q ss_pred EEEcChHHHHH
Q 001293 404 VYQGPRELVLE 414 (1106)
Q Consensus 404 v~~G~~~~~~~ 414 (1106)
+++|+.+++..
T Consensus 251 ~~~g~~~~l~~ 261 (340)
T PRK13536 251 IAEGRPHALID 261 (340)
T ss_pred EEEcCHHHHHh
Confidence 99999998864
No 126
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.2e-37 Score=340.32 Aligned_cols=215 Identities=26% Similarity=0.354 Sum_probs=178.8
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
+++|+++.|+ +..+|+|+||+|++|+++||+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4677776663 2469999999999999999999999999999999999865 468999999987643
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCC-------CChHHHHHHHHHHHHHcCCccccccccCCCCC
Q 001293 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPE-------VDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1106)
Q Consensus 937 ~---~-~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~-------~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~ 1005 (1106)
. . .++.++|++|++.+++.+||+||+.+......... .......+.++++++.+++.+..+.. +
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 2 1 23469999999998899999999988754322110 11233445678899999998766654 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999998777999999999997 57788999999986 5
Q ss_pred EEEEecCC
Q 001293 1086 QEIYVGPL 1093 (1106)
Q Consensus 1086 ~~~~~g~~ 1093 (1106)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 88888864
No 127
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=348.19 Aligned_cols=218 Identities=27% Similarity=0.399 Sum_probs=177.0
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc-----ccceEEEEcCCCC-CC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDN-HI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1106)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 35999999999999999999999999999999999999998 999999999876532 2467999999853 45
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc--ccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD--VCADTMV 316 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1106)
..+||+||+.|+....+.. + ++....++++++.+||+ +..|+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 140 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS-E---------------------------------EEIENRVKRAMNIVGLDYEDYKDK-- 140 (287)
T ss_pred ccccHHHHHHhHHHHCCCC-H---------------------------------HHHHHHHHHHHHHcCCCchhhccC--
Confidence 5689999999875432210 0 01123467789999996 44454
Q ss_pred ccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
.++.||||||||++||+||+.+|++|||||||+|||+.++.++.+.|+++.+. .+++|+.++|+..++.++||+|+
T Consensus 141 ---~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 141 ---SPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ---CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 44579999999999999999999999999999999999999999999998653 34556667888889999999999
Q ss_pred EEcCCeEEEEcChHHHHH---HHHhCCCCCCC
Q 001293 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1106)
+|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999998753 23344555443
No 128
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9.8e-38 Score=336.87 Aligned_cols=215 Identities=27% Similarity=0.409 Sum_probs=179.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++... ...++|+|+|++|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~~---------~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDVK---------KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCCC---------ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 46788887764210 11269999999999999999999999999999999999865 46899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 936 ~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
. ..+++.++|++|++.+++.+||+||+.+....+. ....+....++++++.+++.+..+.. +..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHH
Confidence 3 2345679999999988888999999987654332 22334456788999999998777665 357999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999998777999999999986 57888999999987 5777654
No 129
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.9e-38 Score=325.88 Aligned_cols=217 Identities=26% Similarity=0.349 Sum_probs=179.0
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++.+|++..|+.... ...+|+||||+|.+||++||+|+||||||||.++|+|... +..|+|.++|.+..
T Consensus 4 l~v~nl~~~y~~~~~---------~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~~ 72 (252)
T COG1124 4 LSVRNLSIVYGGGKF---------AFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPLA 72 (252)
T ss_pred EEEeceEEEecCCcc---------hhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCcccC
Confidence 567787766653221 1259999999999999999999999999999999999877 46899999997754
Q ss_pred cc----cccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCCCCC
Q 001293 936 QE----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGL 1008 (1106)
Q Consensus 936 ~~----~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~~~L 1008 (1106)
.. .+++.+.+|+|+|. +.|..||++.|.=.... ...++.+ .++.++++.++|.+ +.++. +.+|
T Consensus 73 ~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~eL 142 (252)
T COG1124 73 PKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHEL 142 (252)
T ss_pred ccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chhc
Confidence 32 46788999999985 56889999888654332 1222222 23899999999975 34443 4679
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1009 SgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
|||||||+||||||+.+|++||||||||+||+..++.|++++.++.++ |-|+|++|||.+. +...|||+++|++ |++
T Consensus 143 SGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~i 220 (252)
T COG1124 143 SGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQI 220 (252)
T ss_pred ChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-CeE
Confidence 999999999999999999999999999999999999999999999754 7899999999874 7788999999997 599
Q ss_pred EEecCCCC
Q 001293 1088 IYVGPLGR 1095 (1106)
Q Consensus 1088 ~~~g~~g~ 1095 (1106)
+..++.+.
T Consensus 221 vE~~~~~~ 228 (252)
T COG1124 221 VEIGPTEE 228 (252)
T ss_pred EEeechhh
Confidence 99999764
No 130
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=356.51 Aligned_cols=217 Identities=22% Similarity=0.294 Sum_probs=183.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|++++|+.. .....+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5688888877411 013569999999999999999999999999999999999876 46899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.. .+++.+||++|++.+++.+||+||+.+....+. ...+..++.++++++.++|.+..+.. +.+||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 235679999999998888999999998754332 23344456688999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1088 (1106)
||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998754 899999999987 57888999999986 6888
Q ss_pred EecCC
Q 001293 1089 YVGPL 1093 (1106)
Q Consensus 1089 ~~g~~ 1093 (1106)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 98874
No 131
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-37 Score=335.06 Aligned_cols=199 Identities=29% Similarity=0.446 Sum_probs=166.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 14 RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 5999999999999999999999999999999999999998 9999999998754332 35799999998888899999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.++....+.. . + .....++.+++.+||++..++.+ ..|
T Consensus 91 ~~l~~~~~~~~~~-~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03259 91 ENIAFGLKLRGVP-K-----A----------------------------EIRARVRELLELVGLEGLLNRYP-----HEL 131 (213)
T ss_pred HHHHhHHHHcCCC-H-----H----------------------------HHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 9999865332110 0 0 01123466788999987666554 469
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++.++||+|++|++|+++
T Consensus 132 SgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~ 210 (213)
T cd03259 132 SGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQREL-GITTIYVTHDQEEALALADRIAVMNEGRIV 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 445556788888999999999999999998
Q ss_pred EEc
Q 001293 405 YQG 407 (1106)
Q Consensus 405 ~~G 407 (1106)
+.|
T Consensus 211 ~~g 213 (213)
T cd03259 211 QVG 213 (213)
T ss_pred ecC
Confidence 765
No 132
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-37 Score=339.54 Aligned_cols=217 Identities=27% Similarity=0.390 Sum_probs=180.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ +..+|+|+||+|++|+++||+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67888887764 2469999999999999999999999999999999999865 46899999998754
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCC-CCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 936 ~~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
.. ..++.++|++|++.+++.+||+||+.++...+.. .........+.++++++.+++.+..+.. +..||+|||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----PAQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHH
Confidence 32 2245799999999888889999999886543211 0012223345678899999998776665 357999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
||++|||||+.+|++|+|||||+|||+.+++.+++.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999998765 899999999987 57888999999986 58888887
Q ss_pred CC
Q 001293 1093 LG 1094 (1106)
Q Consensus 1093 ~g 1094 (1106)
..
T Consensus 221 ~~ 222 (239)
T cd03296 221 PD 222 (239)
T ss_pred HH
Confidence 54
No 133
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=8.6e-39 Score=318.95 Aligned_cols=206 Identities=26% Similarity=0.362 Sum_probs=182.1
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCccc----ccceEEEEccCCCCCC
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 954 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~q~~~~~~ 954 (1106)
++++++++||+.|++||++||+|||||||||.+.++.|... +.+|.|.+||.++.... .+..+||+||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 45689999999999999999999999999999999999876 56899999999876533 2345899999999999
Q ss_pred CCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCC
Q 001293 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1106)
Q Consensus 955 ~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEP 1034 (1106)
.+||+||++.-...+.. +....++++.++++|+.+++.++++... ..||||||+|+.|||||+.+|+.|+||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999876655532 2333456677889999999999998763 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1035 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1035 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
++|+||.+...|+++++.+.+.|..|++|-|... +....|||.+++.+ |++...|...
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 9999999999999999999999999999999987 79999999999997 5899999854
No 134
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.5e-37 Score=338.66 Aligned_cols=213 Identities=26% Similarity=0.358 Sum_probs=179.4
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ +..+|+|+||++++|+++||+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 5677777663 2469999999999999999999999999999999999876 468999999987543
Q ss_pred c---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 937 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 937 ~---~-~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
. . .++.++|++|++.+++.+|++||+.+....+. .........++++++.+++.+..+.. +..||+||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHH
Confidence 1 1 23569999999988888999999988643322 22333445678899999998766655 35799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||++||+||+.+|++|+|||||+|||+.+++.+++.|+++.++|+|||++||+++ ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999998877999999999987 58889999999986 68888887
Q ss_pred CC
Q 001293 1093 LG 1094 (1106)
Q Consensus 1093 ~g 1094 (1106)
..
T Consensus 217 ~~ 218 (232)
T cd03218 217 PE 218 (232)
T ss_pred HH
Confidence 54
No 135
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-37 Score=334.99 Aligned_cols=204 Identities=29% Similarity=0.390 Sum_probs=171.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc--ccceEEEEcCCCCCCCCCCH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 14 EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 5999999999999999999999999999999999999998 999999998764321 23579999999888999999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+||+.+.....+... .+....++.+++.+||++..++.+ ..
T Consensus 91 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 131 (220)
T cd03265 91 WENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLV-----KT 131 (220)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCh-----hh
Confidence 999998754332100 001123567889999987776655 46
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++.+++|+|++|++|++
T Consensus 132 LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i 210 (220)
T cd03265 132 YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKE-EFGMTILLTTHYMEEAEQLCDRVAIIDHGRI 210 (220)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998765 3244566678888999999999999999999
Q ss_pred EEEcChHHH
Q 001293 404 VYQGPRELV 412 (1106)
Q Consensus 404 v~~G~~~~~ 412 (1106)
++.|+++++
T Consensus 211 ~~~~~~~~~ 219 (220)
T cd03265 211 IAEGTPEEL 219 (220)
T ss_pred EEeCChHHc
Confidence 999987753
No 136
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.5e-37 Score=355.38 Aligned_cols=203 Identities=25% Similarity=0.302 Sum_probs=177.5
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc---cc----cceEEEEccCCC
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---TF----ARISGYCEQNDI 951 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~q~~~ 951 (1106)
+.+.+|+|+||+|++||+++|+|+||||||||+++|+|... +..|+|.++|.++... .+ ++.+|||+|++.
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34569999999999999999999999999999999999876 5689999999886532 22 568999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001293 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1106)
Q Consensus 952 ~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illL 1031 (1106)
+++.+||+||+.|+.... ..+.++..+.+.++++.++|.++.+.. +..|||||||||+|||||+.+|+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~-----p~~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRY-----PDELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 233455667789999999998877766 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1032 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1032 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||||++||+.++..+++.++++.++ |+|||++|||++ ++.+.||++++|++ |+++..|+.
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 9999999999999999999998654 899999999987 58889999999986 689998873
No 137
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.5e-38 Score=309.67 Aligned_cols=211 Identities=25% Similarity=0.332 Sum_probs=181.5
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
..++|+|+|..- ==..+++|.+||++||+||||||||||||+|+|... +.+|.|+|+|.+...
T Consensus 3 ~L~~V~~~y~~~---------------~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~ 65 (231)
T COG3840 3 ALDDVRFSYGHL---------------PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTA 65 (231)
T ss_pred cccceEEeeCcc---------------eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCc
Confidence 457788887632 225678999999999999999999999999999877 568999999998754
Q ss_pred -ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 001293 937 -ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1106)
Q Consensus 937 -~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqr 1015 (1106)
....|-+..++|+..++..+||.+|+-++..-.+ ... ...++.++.++..+||.++.++++ .+||||||||
T Consensus 66 ~~P~~RPVSmlFQEnNLFaHLtV~qNigLGl~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQR 137 (231)
T COG3840 66 SPPAERPVSMLFQENNLFAHLTVAQNIGLGLSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQR 137 (231)
T ss_pred CCcccCChhhhhhccccchhhhhhhhhcccCCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHH
Confidence 3456778999999999999999999998753222 222 334566899999999999998874 4699999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1016 l~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
+++||+|+++-.|++||||+|.|||.-+..+..++.++++ ++.|++++||+|+ |.....|+++++++ |++.|.|+.-
T Consensus 138 vALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~~ 215 (231)
T COG3840 138 VALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGSTQ 215 (231)
T ss_pred HHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccHH
Confidence 9999999999999999999999999999999999999874 5899999999998 89999999999997 5999999853
No 138
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.4e-37 Score=359.83 Aligned_cols=217 Identities=26% Similarity=0.362 Sum_probs=184.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ ++.+|+|+||+|++||+++|+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 4 L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcC
Confidence 67888887764 3579999999999999999999999999999999999876 56899999998764
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCC-CCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ..+++.+||++|++.+++.+||+|++.++...+.. .....+..++.++++++.+++.++.++. +.+||||
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----~~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----VTSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHH
Confidence 3 34567899999999988899999999986432110 0111223346689999999999888776 4579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||+.|||||+++|+||||||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G 221 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999877999999999997 58899999999986 6888988
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+..
T Consensus 222 ~~~ 224 (402)
T PRK09536 222 PPA 224 (402)
T ss_pred CHH
Confidence 753
No 139
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.4e-37 Score=333.23 Aligned_cols=206 Identities=30% Similarity=0.397 Sum_probs=174.7
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
+++|+++.|+ +.++|+|+||++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 5677776663 2469999999999999999999999999999999999865 468999999987643
Q ss_pred -ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 001293 937 -ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1106)
Q Consensus 937 -~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqr 1015 (1106)
..+++.++|++|++.+++.+|++||+.+....+. . .++.++++++.+++.+..+.. +..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKK-----VKGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhh-----HhhCCHHHHHH
Confidence 2345679999999988889999999988654321 1 124578899999998776665 35799999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1016 l~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998777899999999987 57788999999986 5787765
No 140
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-37 Score=358.26 Aligned_cols=213 Identities=25% Similarity=0.370 Sum_probs=183.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ +..+|+|+||+|++|++++|+|||||||||||++|+|... +..|+|.++|.+..
T Consensus 4 l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i~ 68 (369)
T PRK11000 4 VTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRMN 68 (369)
T ss_pred EEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67888887763 2469999999999999999999999999999999999876 46899999998764
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 936 ~~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
.. ..++.+||++|++.+++.+||+||+.|+...+. ...++.++.++++++.++|.++.++. +.+|||||||
T Consensus 69 ~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~-----~~~LSgGq~Q 140 (369)
T PRK11000 69 DVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRK-----PKALSGGQRQ 140 (369)
T ss_pred CCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCC-----hhhCCHHHHH
Confidence 32 234679999999999999999999998764332 23344456789999999998877765 3579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||+|||||+.+|++|||||||+|||+.++..+++.|+++.++ |.|||++|||++ ++...||++++|++ |+++..|+.
T Consensus 141 RvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~ 218 (369)
T PRK11000 141 RVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKP 218 (369)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999998764 899999999987 68889999999986 689888874
No 141
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-38 Score=327.28 Aligned_cols=221 Identities=28% Similarity=0.402 Sum_probs=187.7
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc----ceEEEEcCCCCCC
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1106)
...++++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|.++....+. .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4567999999999999999999999999999999999999999 99999999999887764 4578889999999
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
++|||.||+..++..+.. ....-.. +. ...+..+....+..+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~----------~~---------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGR----------PR---------ARKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhcc----------cc---------chhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999998764421 0000000 00 0001122345678899999999999988775
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+ .++.+|+.+-|+..-++.+||||+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999865 45677777999999999999999999
Q ss_pred cCCeEEEEcChHHHHH
Q 001293 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999854
No 142
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.2e-37 Score=352.05 Aligned_cols=206 Identities=28% Similarity=0.393 Sum_probs=176.5
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc--ccceEEEEcCCCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+++|+|+|+.|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999998875421 2357999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.|.+++.+.... +....++.+++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~~----------------------------------~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPKD----------------------------------EAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCHH----------------------------------HHHHHHHHHHHHcCChhHhCCchh-----
Confidence 99999987655431100 011235678999999887776654
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++.+ . +++|+.++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998764 3 4556667888999999999999999999
Q ss_pred EEEEcChHHHHH
Q 001293 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999998755
No 143
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.4e-37 Score=335.65 Aligned_cols=208 Identities=28% Similarity=0.386 Sum_probs=172.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.|+.. ...+.+|+|+||+|++|+++||+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 69 (218)
T cd03255 1 IELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDIS 69 (218)
T ss_pred CeEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehh
Confidence 3567887776411 001469999999999999999999999999999999999865 46899999998764
Q ss_pred ccc-------ccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 001293 936 QET-------FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1106)
Q Consensus 936 ~~~-------~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~L 1008 (1106)
... .++.++|++|++.+++.+||+||+.+....+. ......++.++++++.+++.+..+.. +..|
T Consensus 70 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~L 141 (218)
T cd03255 70 KLSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHY-----PSEL 141 (218)
T ss_pred hcchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcC-----hhhc
Confidence 311 24579999999988888999999998754432 22233445688999999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1009 SgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
|||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++. .||++++|++|
T Consensus 142 S~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~-~~d~v~~l~~G 216 (218)
T cd03255 142 SGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LAE-YADRIIELRDG 216 (218)
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHh-hhcEEEEeeCC
Confidence 99999999999999999999999999999999999999999999876 5899999999986 354 89999999875
No 144
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-37 Score=337.69 Aligned_cols=209 Identities=30% Similarity=0.408 Sum_probs=171.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 16 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 92 (239)
T cd03296 16 VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVF 92 (239)
T ss_pred EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999988754332 35799999998888899999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.|+....+...+.. . .+....++.+++.+||++..++.+ ..|
T Consensus 93 e~l~~~~~~~~~~~~~~---~---------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 137 (239)
T cd03296 93 DNVAFGLRVKPRSERPP---E---------------------------AEIRAKVHELLKLVQLDWLADRYP-----AQL 137 (239)
T ss_pred HHHhhhhhhccccccCC---H---------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 99998754321100000 0 001123567788999977666544 469
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++...+. +||.++|+..++.+.+|+|++|++|+++
T Consensus 138 S~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~-tvii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (239)
T cd03296 138 SGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHV-TTVFVTHDQEEALEVADRVVVMNKGRIE 216 (239)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhCCEEEEEECCeEE
Confidence 999999999999999999999999999999999999999999987653344 4555777888899999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
+.|+++++.
T Consensus 217 ~~~~~~~~~ 225 (239)
T cd03296 217 QVGTPDEVY 225 (239)
T ss_pred EecCHHHHh
Confidence 999988763
No 145
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.7e-37 Score=334.06 Aligned_cols=206 Identities=25% Similarity=0.341 Sum_probs=173.8
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ ++..+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 46778877663 12369999999999999999999999999999999999865 46899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.. .+++.++|++|++.+++.+|+.||+.+....+. ......++.++++++.+++.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAF-----PEQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCC
Confidence 21 245679999999988888999999988754321 22333445688999999998766654 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999987 577889999999875
No 146
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.4e-37 Score=349.16 Aligned_cols=214 Identities=23% Similarity=0.361 Sum_probs=184.2
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|++++|+ +..+|+|+||++++||++||+|||||||||||++|+|... +..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67788877763 2469999999999999999999999999999999999876 56899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 936 ~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
. ...++.+||++|++.+++.+|+.||+.|.+.++. .+.++..+.++++++.++|.+..++. +..||+|||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKK-----IGQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCc-----hhhCCHHHH
Confidence 3 2345679999999999999999999998765542 22334445688999999999887766 357999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||++||+||+.+|++|||||||+|||+.+++.+++.++++.+ ++|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999997 68889999999986 689999886
Q ss_pred CC
Q 001293 1094 GR 1095 (1106)
Q Consensus 1094 g~ 1095 (1106)
..
T Consensus 217 ~~ 218 (301)
T TIGR03522 217 DE 218 (301)
T ss_pred HH
Confidence 53
No 147
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-37 Score=337.68 Aligned_cols=217 Identities=24% Similarity=0.314 Sum_probs=180.7
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++.. .+..++|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4678887776410 001269999999999999999999999999999999999876 46899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.. ..++.++|++|++.+++.+|++||+.+....+. .........++++++.+++.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 31 235679999999998888999999988654332 22334455688999999998776665 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1088 (1106)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999987 57788999999986 6888
Q ss_pred EecCC
Q 001293 1089 YVGPL 1093 (1106)
Q Consensus 1089 ~~g~~ 1093 (1106)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 88874
No 148
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.1e-37 Score=336.45 Aligned_cols=213 Identities=23% Similarity=0.282 Sum_probs=176.1
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC-----CCCeeeeEEEEcC
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNITISG 931 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~-----~~~~~~G~i~i~g 931 (1106)
+++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|.. . +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 5677777663 236999999999999999999999999999999999976 4 5689999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
.++.. ..+++.++|++|++.++ .+||+||+.+....+.. ...+..++.++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87542 23456799999998877 78999999886543321 1122234567889999999876554320 25
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
+||||||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++ +|||++||+++ ++.+.||++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999876 99999999987 57788999999986 58
Q ss_pred EEEecCC
Q 001293 1087 EIYVGPL 1093 (1106)
Q Consensus 1087 ~~~~g~~ 1093 (1106)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 8888874
No 149
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-37 Score=355.02 Aligned_cols=214 Identities=24% Similarity=0.363 Sum_probs=186.1
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++|++..++ +..+|+|+||+|++|++++|+|||||||||||++|+|... +..|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488899987763 2468999999999999999999999999999999999876 5689999999876
Q ss_pred Cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 935 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 935 ~~-~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
.. ...+|.+||++|++.++|.+||.||+.|+...+ ..+..+.++.+.++++.++|.++.++. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 235678999999999999999999999976433 223445566789999999999887776 457999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+ .|.|+|++|||++ ++...+|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999987 68899999999986 68999888
Q ss_pred C
Q 001293 1093 L 1093 (1106)
Q Consensus 1093 ~ 1093 (1106)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 4
No 150
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-37 Score=346.44 Aligned_cols=218 Identities=24% Similarity=0.351 Sum_probs=175.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-------cccceEEEEcCCC-C
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHD-N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~ 236 (1106)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++ .
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999999998 99999999987531 1235799999985 2
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
.+...||+||+.|+....+... .+....++.+++.+||+ ...++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 4446799999998754332110 00112457788999996 445544
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++... .+++|+.++|+..++.++||+|
T Consensus 143 -----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~-~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 -----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKE-KGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEE
Confidence 4569999999999999999999999999999999999999999999987653 3455666788889999999999
Q ss_pred EEEcCCeEEEEcChHHHHH---HHHhCCCCCCC
Q 001293 396 ILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1106)
++|++|+++++|+++++.+ .+...|+.+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999988742 23344544443
No 151
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.6e-37 Score=348.29 Aligned_cols=205 Identities=28% Similarity=0.404 Sum_probs=173.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc--ccceEEEEcCCCCCCCCCCH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1106)
++|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 18 ~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 94 (303)
T TIGR01288 18 VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTV 94 (303)
T ss_pred EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcH
Confidence 4999999999999999999999999999999999999998 999999998864322 24679999999888999999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+||+.+.....+... + +....++.+++.+||++..++.++ .
T Consensus 95 ~e~l~~~~~~~~~~~--~--------------------------------~~~~~~~~ll~~~~l~~~~~~~~~-----~ 135 (303)
T TIGR01288 95 RENLLVFGRYFGMST--R--------------------------------EIEAVIPSLLEFARLESKADVRVA-----L 135 (303)
T ss_pred HHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHCCChhHhcCchh-----h
Confidence 999987544322100 0 011234567889999887776654 5
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|++++. . +++|+.++|+..++.++||+|++|++|++
T Consensus 136 LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~i 213 (303)
T TIGR01288 136 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGRK 213 (303)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999764 3 45566678888999999999999999999
Q ss_pred EEEcChHHHHH
Q 001293 404 VYQGPRELVLE 414 (1106)
Q Consensus 404 v~~G~~~~~~~ 414 (1106)
++.|+++++..
T Consensus 214 ~~~g~~~~~~~ 224 (303)
T TIGR01288 214 IAEGRPHALID 224 (303)
T ss_pred EEEcCHHHHHh
Confidence 99999998754
No 152
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-37 Score=345.95 Aligned_cols=218 Identities=22% Similarity=0.307 Sum_probs=180.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+++++|++.|+... .....+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67889988875210 011369999999999999999999999999999999999876 56899999998864
Q ss_pred c-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc--cccccccCCCCCCC
Q 001293 936 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN--PLRQSLVGLPGVSG 1007 (1106)
Q Consensus 936 ~-----~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~--~~~~~~~g~~g~~~ 1007 (1106)
. ..+++.+||++|++. .....||+||+.|+.... ....++..+.++++++.++|. ++.+.. +..
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 234578999999874 233579999999865432 234455556788999999996 555554 467
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999986 57788999999987 68
Q ss_pred EEEecCC
Q 001293 1087 EIYVGPL 1093 (1106)
Q Consensus 1087 ~~~~g~~ 1093 (1106)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 8888874
No 153
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-37 Score=332.61 Aligned_cols=191 Identities=28% Similarity=0.373 Sum_probs=163.0
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCC-CCCCCHH
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIH-SPFVTIY 959 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~-~~~~tv~ 959 (1106)
..+|+|+||+|++|++++|+||||||||||+++|+|... +.+|+|.++|.+......++.+||++|++.. ....|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 359999999999999999999999999999999999866 5689999999876444455679999999742 3457999
Q ss_pred HHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCC
Q 001293 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1039 (1106)
Q Consensus 960 e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD 1039 (1106)
||+.+...... . ....++++++.+++.+..+.. +..||||||||++|||||+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~-----~--~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD-----A--GNEQAETVLKDLDLYALKERH-----PLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC-----c--cHHHHHHHHHHcCCchhcCCC-----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987643221 1 124578899999998877765 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1040 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1040 ~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++| ++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~G-~i 204 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLANG-AI 204 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEECC-EE
Confidence 99999999999999777999999999987 577789999999874 55
No 154
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.7e-37 Score=337.35 Aligned_cols=215 Identities=22% Similarity=0.331 Sum_probs=181.0
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ ++.+|+|+||++++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 46778877663 2469999999999999999999999999999999999765 56899999998764
Q ss_pred c-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 936 Q-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 936 ~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
. ..+++.++|++|++.+++.+||+||+.+...... ........+.+.++++.+++.+..+.. +..||+
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2345679999999988888999999987642111 123334455678999999998776665 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999998877999999999987 57788999999986 689999
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 218 g~~~ 221 (240)
T PRK09493 218 GDPQ 221 (240)
T ss_pred CCHH
Confidence 8864
No 155
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=334.37 Aligned_cols=217 Identities=24% Similarity=0.312 Sum_probs=179.3
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++||++.|+.. .....+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 37889998887421 011469999999999999999999999999999999999865 5689999999876
Q ss_pred Cccc------c-cceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 001293 935 KQET------F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1106)
Q Consensus 935 ~~~~------~-~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~ 1007 (1106)
.... + ++.++|++|++.+++.+|++||+.+....+. ...+..++.++++++.+++.+..+.. +.+
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGK---KKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 4311 2 2569999999988888999999998654321 22334456688999999998776655 357
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
||||||||++||+||+.+|+||||||||+|||+.++..+++.|+++.+ +|+|||++||+++ ++ +.+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999865 5899999999986 34 44689999986 68
Q ss_pred EEEecCC
Q 001293 1087 EIYVGPL 1093 (1106)
Q Consensus 1087 ~~~~g~~ 1093 (1106)
+++.|++
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9998886
No 156
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-37 Score=339.26 Aligned_cols=217 Identities=26% Similarity=0.309 Sum_probs=177.3
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.|+. +..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYPN------------GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecCC------------ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccc
Confidence 46777766631 1469999999999999999999999999999999999765 468999999987542
Q ss_pred ------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhc-----CCCCCChHHHHHHHHHHHHHcCCccccccccCCCCC
Q 001293 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1106)
Q Consensus 937 ------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r-----~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~ 1005 (1106)
...++.++|++|++.+++.+||+||+.+..... ...........+.+.++++.+++.+..+.. +
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 224567999999998888899999998753210 000111123345678899999998766654 4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
.+||||||||++||+||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998754 899999999997 57779999999986
Q ss_pred CEEEEecCCC
Q 001293 1085 GQEIYVGPLG 1094 (1106)
Q Consensus 1085 g~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 221 G~i~~~~~~~ 230 (241)
T cd03256 221 GRIVFDGPPA 230 (241)
T ss_pred CEEEeecCHH
Confidence 6888888753
No 157
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-37 Score=335.87 Aligned_cols=205 Identities=30% Similarity=0.404 Sum_probs=172.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc------cceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 5999999999999999999999999999999999999998 9999999998764321 357999999998899
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.+.....+.. . ......++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVP-K---------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 999999998875432210 0 001123567788999987766544
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINREL-GLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4699999999999999999999999999999999999999999999876532 4455557778888899999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 158
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-37 Score=344.51 Aligned_cols=224 Identities=27% Similarity=0.381 Sum_probs=179.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-------cccceEEEEcCCC-CC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHD-NH 237 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 237 (1106)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999998 99999999987521 1246799999985 24
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1106)
+...||.||+.|+....+... .+....+.++++.+||. ...++
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccC--
Confidence 445799999999865432110 00122456778899995 34443
Q ss_pred ccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
.++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.++||+|+
T Consensus 141 ---~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 141 ---SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ---CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 3457999999999999999999999999999999999999999999998754 3 4456667888889999999999
Q ss_pred EEcCCeEEEEcChHHHH---HHHHhCCCCCCCCCChhHHH
Q 001293 397 LLSDGQIVYQGPRELVL---EFFASMGFRCPKRKGVADFL 433 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~---~~f~~~G~~~p~~~~~ad~l 433 (1106)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999999874 33556677766654444333
No 159
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.8e-37 Score=336.47 Aligned_cols=213 Identities=27% Similarity=0.394 Sum_probs=172.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 14 VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999999999999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++....+... ..+. . ... ...+....++++++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~~-------~~~~-~-----~~~-----------~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 91 TVLENVMVAAQARTGSG-------LLLA-R-----ARR-----------EEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CHHHHHHHHHhhccccc-------cccc-c-----ccc-----------cHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 99999998754321100 0000 0 000 00011234577889999987666544
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ .+|+.++|+..++.++||+|++|++|
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RG-ITVLLVEHDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999998764 44 45556778888999999999999999
Q ss_pred eEEEEcChHHH
Q 001293 402 QIVYQGPRELV 412 (1106)
Q Consensus 402 ~iv~~G~~~~~ 412 (1106)
++++.|+++++
T Consensus 220 ~i~~~~~~~~~ 230 (236)
T cd03219 220 RVIAEGTPDEV 230 (236)
T ss_pred EEEeecCHHHh
Confidence 99999998876
No 160
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.8e-37 Score=332.35 Aligned_cols=205 Identities=25% Similarity=0.367 Sum_probs=172.7
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ +.+.+|+|+||++++|++++|+|+||||||||+++|+|... +..|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4677777663 12369999999999999999999999999999999999765 468999999987542
Q ss_pred ------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 937 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 937 ------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
..+++.++|++|++.+++.+|++||+.+....+. ...+..++.++++++.+++.+..+.. +.+|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCH
Confidence 1245679999999998888999999988754332 22334455678899999998776655 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++|
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~G 212 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALERG 212 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999998777999999999986 577789999999875
No 161
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=4.2e-37 Score=330.70 Aligned_cols=199 Identities=30% Similarity=0.424 Sum_probs=167.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 4999999999999999999999999999999999999998 9999999998754332 35799999998888899999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.++.+..+... .+....++.+++.+||++..+..+ +.|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hhC
Confidence 99988754322100 001123567788999987776655 469
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
|||||||++||++++.+|++++|||||+|||+.++..+.+.|++++...+ ++|+.++|+..++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLG-TTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998865334 45555778888999999999999999999
Q ss_pred EEc
Q 001293 405 YQG 407 (1106)
Q Consensus 405 ~~G 407 (1106)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 162
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=4.8e-37 Score=333.21 Aligned_cols=221 Identities=35% Similarity=0.603 Sum_probs=179.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-CCeeeeEEEEcCccC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYITGNITISGYPK 934 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~-~~~~~G~i~i~g~~~ 934 (1106)
+.|+||.|.++... ..+.+|+|+||+|++||+++|+||||||||||+++|+|... +.+..|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 45778887774210 12569999999999999999999999999999999999764 124689999999877
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHH-HHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDE-VMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~-~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
....+++.++|++|++.+++.+|++||+.|..................+++ .++.+++.++.+.. +..||+|||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 554566789999999988888999999998754332211122222234455 88888887766654 457999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||++|||+|+.+|++|+|||||+|||+.++..+++.++++.++|+|||+++|++..++.+.||++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999984368899999999986 5888765
No 163
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-37 Score=341.37 Aligned_cols=204 Identities=25% Similarity=0.303 Sum_probs=172.9
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc---c----ccceEEEEccCCC
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDI 951 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~ 951 (1106)
++..+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 44679999999999999999999999999999999999876 4689999999875421 1 2357999999998
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001293 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1106)
Q Consensus 952 ~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illL 1031 (1106)
+++.+|++||+.+...... .......+.++++++.++|.+..+.. +.+||||||||++|||||+.+|+||||
T Consensus 113 ~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKY-----PDELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8888999999988653321 22333445678899999998777765 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1032 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1032 DEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~~ 246 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTPE 246 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCHH
Confidence 9999999999999999999998754 899999999987 57788999999986 6888888753
No 164
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.9e-37 Score=338.55 Aligned_cols=215 Identities=26% Similarity=0.356 Sum_probs=180.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ +..+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67888887764 2369999999999999999999999999999999999865 46899999997653
Q ss_pred c-----------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCC
Q 001293 936 Q-----------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1106)
Q Consensus 936 ~-----------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g 1004 (1106)
. ..+++.++|++|++.+++..|++||+.++..... ....+...+.++++++.+++.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1235679999999988888999999987543211 122333445678899999998766654
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1005 ~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
+.+||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4679999999999999999999999999999999999999999999999877999999999987 57788999999986
Q ss_pred CEEEEecCCC
Q 001293 1085 GQEIYVGPLG 1094 (1106)
Q Consensus 1085 g~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 220 G~i~~~~~~~ 229 (250)
T PRK11264 220 GRIVEQGPAK 229 (250)
T ss_pred CEEEEeCCHH
Confidence 5888888753
No 165
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=313.16 Aligned_cols=207 Identities=30% Similarity=0.438 Sum_probs=175.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc---ceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lT 242 (1106)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+|.+||.+++.+.+. +.-+..+|+..+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 4999999999999999999999999999999999999998 99999999999888664 56799999988877889
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+|-+.++..-.+.+... .+...+++..|...++.+.+.. ..+
T Consensus 92 v~eVV~mGr~p~~~g~~~--------------------------------~e~~~i~~~ala~~d~~~la~R-----~y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGREP--------------------------------EEDERIAAQALAATDLSGLAGR-----DYR 134 (259)
T ss_pred HHHHHHhcccccccCCCc--------------------------------hhhHHHHHHHHHHcChhhhhcc-----chh
Confidence 999999987543222110 0112345667777788776653 345
Q ss_pred CCChhhhHHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 323 GISGGQKKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~------~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
.|||||||||.+||.|+. ++++||||||||+||......+++..|++++. + ..|+++.|+..-+..+||+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheee
Confidence 799999999999999974 44689999999999999999999999999874 3 566668899999999999999
Q ss_pred EEcCCeEEEEcChHHHHH
Q 001293 397 LLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1106)
+|.+||++..|++++++.
T Consensus 213 ll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 213 LLHQGRVIASGSPQDVLT 230 (259)
T ss_pred eeeCCeEeecCCHHHhcC
Confidence 999999999999998753
No 166
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.8e-37 Score=332.86 Aligned_cols=194 Identities=25% Similarity=0.384 Sum_probs=163.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 5999999999999999999999999999999999999998 999999998875432 2357999999998899
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.++.+..+... .+....++.+++.+||++..++.+
T Consensus 94 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 136 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP--- 136 (216)
T ss_pred cccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998764322100 001123567789999987666554
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.++||+|++|+
T Consensus 137 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~ 212 (216)
T TIGR00960 137 --MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTLS 212 (216)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998754 3 4456667888888999999999999
Q ss_pred CCeE
Q 001293 400 DGQI 403 (1106)
Q Consensus 400 ~G~i 403 (1106)
+|++
T Consensus 213 ~G~i 216 (216)
T TIGR00960 213 RGRL 216 (216)
T ss_pred CCcC
Confidence 9975
No 167
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-37 Score=342.43 Aligned_cols=215 Identities=24% Similarity=0.328 Sum_probs=180.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++. ...+|+||||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 3778899887741 2359999999999999999999999999999999999765 4689999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ...++.+||++|++. .++..||.||+.|+.... ....+...+.+.++++.++|.+..++. +..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKP-----PYHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----hhhCCH
Confidence 43 234567999999973 345679999998864321 233344455688999999998877765 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999987 47789999999986 588898
Q ss_pred cCC
Q 001293 1091 GPL 1093 (1106)
Q Consensus 1091 g~~ 1093 (1106)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 885
No 168
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-37 Score=331.11 Aligned_cols=201 Identities=29% Similarity=0.397 Sum_probs=168.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999988 9999999988753 346799999998888889999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.++....+... ......++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99998754322100 001123567888999987666554 469
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~ 402 (1106)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++....+ ++|+.++|+..++.++||++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETG-KTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 99999999999999999999999999999999999999999998754334 455557778888999999999999 799
Q ss_pred EEEEcChH
Q 001293 403 IVYQGPRE 410 (1106)
Q Consensus 403 iv~~G~~~ 410 (1106)
+++.++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99988753
No 169
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.4e-37 Score=332.28 Aligned_cols=214 Identities=25% Similarity=0.391 Sum_probs=178.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++. +..++|+|+||++++|+++||+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 356777776631 11469999999999999999999999999999999999865 46899999998764
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 936 ~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
. ..+++.++|++|++.+++..|++||+.+....+. ...+...+.++++++.++|.+..+.. +..||+|||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKR-----ARTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhCh-----hhhCCHHHH
Confidence 3 2345679999999988888999999988654332 22233345678899999998776655 357999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999875 699999999997 57788999999986 588888764
No 170
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3.9e-37 Score=333.14 Aligned_cols=211 Identities=28% Similarity=0.422 Sum_probs=174.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.++ +..+|+|+||++++|+++||+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 65 (222)
T cd03224 1 LEVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDIT 65 (222)
T ss_pred CEEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcC
Confidence 35677776653 2369999999999999999999999999999999999876 46899999998754
Q ss_pred cc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHc-CCccccccccCCCCCCCCCH
Q 001293 936 QE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 936 ~~---~-~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~-~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. . .++.++|++|++.+++.+|++||+.+....+. .......+.++++.+ ++.+..+.. +..|||
T Consensus 66 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 135 (222)
T cd03224 66 GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSG 135 (222)
T ss_pred CCCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCH
Confidence 31 1 24569999999988899999999988654321 112234466778877 465555544 457999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 136 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (222)
T cd03224 136 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLE 213 (222)
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEe
Confidence 9999999999999999999999999999999999999999998777899999999987 57888999999986 688888
Q ss_pred cCC
Q 001293 1091 GPL 1093 (1106)
Q Consensus 1091 g~~ 1093 (1106)
|+.
T Consensus 214 ~~~ 216 (222)
T cd03224 214 GTA 216 (222)
T ss_pred CCH
Confidence 764
No 171
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-37 Score=336.45 Aligned_cols=214 Identities=27% Similarity=0.373 Sum_probs=179.0
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++. ...+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 46777776641 1359999999999999999999999999999999999865 468999999987542
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc--ccccccCCCCCCCCCHH
Q 001293 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 937 ---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~--~~~~~~g~~g~~~LSgG 1011 (1106)
..+++.++|++|++.+++.+|++||+.+....+. .+.+...+.+.++++.+++.+ ..+.. +.+||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 2345679999999988888999999988654332 223344556889999999985 55544 4579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999998764 899999999987 57888999999986 588888
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 218 ~~~~ 221 (242)
T cd03295 218 GTPD 221 (242)
T ss_pred cCHH
Confidence 8753
No 172
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.2e-37 Score=333.86 Aligned_cols=203 Identities=22% Similarity=0.387 Sum_probs=170.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 14 KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 4999999999999999999999999999999999999998 9999999988754332 24699999999899999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.+.....+.. . .+....++.+++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 131 (232)
T cd03218 91 TVEENILAVLEIRGLS-K---------------------------------KEREEKLEELLEEFHITHLRKSKA----- 131 (232)
T ss_pred cHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 9999998865322110 0 001123567888999987666554
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+|++|++|
T Consensus 132 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G 209 (232)
T cd03218 132 SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYEG 209 (232)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 3 445566778888999999999999999
Q ss_pred eEEEEcChHHH
Q 001293 402 QIVYQGPRELV 412 (1106)
Q Consensus 402 ~iv~~G~~~~~ 412 (1106)
++++.|+.+++
T Consensus 210 ~i~~~~~~~~~ 220 (232)
T cd03218 210 KVLAEGTPEEI 220 (232)
T ss_pred eEEEEeCHHHh
Confidence 99999998875
No 173
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-37 Score=337.03 Aligned_cols=212 Identities=27% Similarity=0.368 Sum_probs=178.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ +..+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 46778876663 2469999999999999999999999999999999999865 46899999998764
Q ss_pred cccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 001293 936 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1106)
Q Consensus 936 ~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqr 1015 (1106)
. ..+.+||++|++.+++..||.||+.+....+. .......+.+.++++.+++.+..+.. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 23458999999988888999999987643321 22333445688999999998766654 35799999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEec-CCEEEEecCC
Q 001293 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1093 (1106)
Q Consensus 1016 l~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~-Gg~~~~~g~~ 1093 (1106)
++||++|+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.||++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999997 57889999999985 6899998765
No 174
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=8.5e-37 Score=344.68 Aligned_cols=205 Identities=27% Similarity=0.391 Sum_probs=175.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc--ccceEEEEcCCCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1106)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 35999999999999999999999999999999999999998 999999998875422 2367999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.|.+++.+... .+....++.+++.+||++..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999998765543210 0011235678999999988776654
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+||+||+++|++|||||||+|||+.++..+++.|+++. .+ ++|+.++|...++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999874 34 556667888999999999999999999
Q ss_pred EEEEcChHHHHH
Q 001293 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998755
No 175
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3e-37 Score=338.80 Aligned_cols=218 Identities=24% Similarity=0.274 Sum_probs=177.8
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+. +..+|+|+||++++|++++|+||||||||||+++|+|... +..|+|.++|.++.
T Consensus 2 l~~~~l~~~~~~------------~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYPN------------GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecCC------------CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 467788776631 2358999999999999999999999999999999999865 46899999998754
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhc-----CCCCCChHHHHHHHHHHHHHcCCccccccccCCCC
Q 001293 936 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLR-----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1106)
Q Consensus 936 ~------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r-----~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g 1004 (1106)
. ..+++.++|++|++.+++.+||+||+.+..... .......+..++.+.++++.+++.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 124567999999998888899999998643110 000111123345678899999998766654
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1005 ~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.||++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 4579999999999999999999999999999999999999999999998654 899999999987 47788999999986
Q ss_pred CCEEEEecCCC
Q 001293 1084 GGQEIYVGPLG 1094 (1106)
Q Consensus 1084 Gg~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 222 -G~i~~~~~~~ 231 (243)
T TIGR02315 222 -GEIVFDGAPS 231 (243)
T ss_pred -CEEEecCCHH
Confidence 5888888754
No 176
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.9e-37 Score=334.31 Aligned_cols=203 Identities=25% Similarity=0.371 Sum_probs=168.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC-----CCCCCceeEEEEcCccCCCCc-----ccceEEEEcCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL-----DPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 235 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|.++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 5999999999999999999999999999999999999 787 999999998875432 245799999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.++ .+||+||+.++....+.... . +....++.+++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK-----E----------------------------ELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH-----H----------------------------HHHHHHHHHHHHcCCChHHhcc
Confidence 777 89999999987543221000 0 0112356678899998765544
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
+. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . ++|+.++|+..++.++||++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEE
Confidence 20 357999999999999999999999999999999999999999999998754 2 55666788888999999999
Q ss_pred EEEcCCeEEEEcChHH
Q 001293 396 ILLSDGQIVYQGPREL 411 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~ 411 (1106)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998764
No 177
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.3e-37 Score=331.48 Aligned_cols=199 Identities=27% Similarity=0.421 Sum_probs=164.8
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCC--CCCCH
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTI 958 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~--~~~tv 958 (1106)
..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. ...|+
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999865 46899999998754 3456799999998763 33799
Q ss_pred HHHHHHHHhhcCC-CCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCC
Q 001293 959 YESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1037 (1106)
Q Consensus 959 ~e~l~~~~~~r~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsg 1037 (1106)
+||+.+....... .....+...+.++++++.+++.+..+.. +..||||||||++|||||+.+|++|||||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 0011223345678899999998766655 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1038 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1038 LD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999998777899999999987 57788999999975 3 66655
No 178
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=340.55 Aligned_cols=215 Identities=23% Similarity=0.340 Sum_probs=174.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCC-CCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD-NHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~l 241 (1106)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 4999999999999999999999999999999999999998 9999999998764322 35799999986 367788
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.|+....+... .+....++++++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 99999998754322110 001124567899999987666554
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++....+.| |+.++|+..++ ..||+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-ilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMT-VISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999886533444 55566777777 589999999999
Q ss_pred eEEEEcChHHHHH---HHHhCCCCCC
Q 001293 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1106)
Q Consensus 402 ~iv~~G~~~~~~~---~f~~~G~~~p 424 (1106)
+++..|+++++.. .++..|+.+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 217 QVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred EEEEECCHHHHHcChHHHHHcCCCCc
Confidence 9999999988753 2334454433
No 179
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=9.5e-37 Score=339.30 Aligned_cols=216 Identities=19% Similarity=0.287 Sum_probs=180.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ ++.+|+||||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 378899987763 2469999999999999999999999999999999999865 4689999999875
Q ss_pred Ccc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 001293 935 KQE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1106)
Q Consensus 935 ~~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~L 1008 (1106)
... ..++.++|++|++.+++.+|+.||+.+...... ..+.+..+..+.++++.+++.+..+.. +..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLM-----PSEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 421 134579999999988888999999987643211 122333345678899999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1009 SgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
|||||||++||++|+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||++. ++.+.||++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998755 899999999987 57888999999986 689
Q ss_pred EEecCCC
Q 001293 1088 IYVGPLG 1094 (1106)
Q Consensus 1088 ~~~g~~g 1094 (1106)
++.|+..
T Consensus 223 ~~~g~~~ 229 (269)
T PRK11831 223 VAHGSAQ 229 (269)
T ss_pred EEeCCHH
Confidence 9988753
No 180
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=7.2e-37 Score=331.10 Aligned_cols=202 Identities=25% Similarity=0.416 Sum_probs=167.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 14 QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 5999999999999999999999999999999999999998 9999999988755432 35699999999899999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc-CCcccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1106)
||+||+.++....+ .. + ....++.+++.+ ++++..++.+
T Consensus 91 t~~~~l~~~~~~~~--~~-----~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~---- 130 (222)
T cd03224 91 TVEENLLLGAYARR--RA-----K-----------------------------RKARLERVYELFPRLKERRKQLA---- 130 (222)
T ss_pred cHHHHHHHHhhhcC--ch-----h-----------------------------HHHHHHHHHHHHHhhhhhhhCch----
Confidence 99999998754321 00 0 011233455666 4655555443
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
+.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|+|++|++
T Consensus 131 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 131 -GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLER 207 (222)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEeeC
Confidence 46999999999999999999999999999999999999999999998764 3 44555577888889999999999999
Q ss_pred CeEEEEcChHHHH
Q 001293 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+.+++.
T Consensus 208 G~i~~~~~~~~~~ 220 (222)
T cd03224 208 GRVVLEGTAAELL 220 (222)
T ss_pred CeEEEeCCHHHHh
Confidence 9999999987753
No 181
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-37 Score=345.26 Aligned_cols=219 Identities=25% Similarity=0.298 Sum_probs=180.0
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
|.++|+++.|+... .....+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceecc
Confidence 67889988885210 011358999999999999999999999999999999999876 45799999886531
Q ss_pred ---------------------------cccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHH
Q 001293 936 ---------------------------QETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVM 987 (1106)
Q Consensus 936 ---------------------------~~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l 987 (1106)
....++.+|||+|++. .+...||+||+.|+.... ..+.+...+.+.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 1234567999999862 334579999999875432 234445556789999
Q ss_pred HHcCCc-cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecC
Q 001293 988 ELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1066 (1106)
Q Consensus 988 ~~~~l~-~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~ 1066 (1106)
+.++|. ++.+.. +..||||||||++||++|+.+|++|||||||+|||+.++..+++.|+++.+.|+|||++|||
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566655 46799999999999999999999999999999999999999999999998779999999999
Q ss_pred ccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1067 PSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1067 ~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
++ ++.+.||++++|++ |++++.|+..
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~~ 250 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDTY 250 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 87 57889999999986 5899988753
No 182
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-37 Score=328.68 Aligned_cols=208 Identities=32% Similarity=0.477 Sum_probs=174.7
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ +..+|+|+||++++| ++||+|+||||||||+++|+|... +.+|+|.++|.++..
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 5677776653 246999999999999 999999999999999999999865 468999999987643
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 937 --~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
..+++.++|++|++.+++.+||.||+.+....+. ...++..+.++++++.+++.+..+.. +..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHH
Confidence 2345679999999998888999999988654432 22233345678899999998776654 3579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
|++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|++ |++++.|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999875 599999999987 47778999999986 5777654
No 183
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-37 Score=344.09 Aligned_cols=219 Identities=26% Similarity=0.297 Sum_probs=179.9
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|++++|+.... ....+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~~--------~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKTP--------FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCCc--------ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 678999888852100 11359999999999999999999999999999999999876 46899999998763
Q ss_pred c-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 001293 936 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1106)
Q Consensus 936 ~-------~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~ 1006 (1106)
. ..+++.+|||+|++. .....||+||+.|+.... ..+.++..+.++++++.++|. ++.+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999863 223479999999875332 233444456788999999996 555554 46
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
.||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.++ |.|||++||+++ ++.+.||++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999987 57889999999986 6
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 223 ~i~~~g~~~ 231 (290)
T PRK13634 223 TVFLQGTPR 231 (290)
T ss_pred EEEEECCHH
Confidence 899988743
No 184
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=6.8e-37 Score=330.78 Aligned_cols=203 Identities=31% Similarity=0.447 Sum_probs=170.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC--cccceEEEEcCCCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lT 242 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 35999999999999999999999999999999999999998 99999999987532 12357999999988888999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.+..+..+... + +....++++++.+||++..++.+ .
T Consensus 92 v~~~l~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 132 (220)
T cd03263 92 VREHLRFYARLKGLPK--S--------------------------------EIKEEVELLLRVLGLTDKANKRA-----R 132 (220)
T ss_pred HHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCHHHHhChh-----h
Confidence 9999998754432110 0 00123566788999987777655 4
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+++|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998753 3 556667788888889999999999999
Q ss_pred EEEEcChHHH
Q 001293 403 IVYQGPRELV 412 (1106)
Q Consensus 403 iv~~G~~~~~ 412 (1106)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 185
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-37 Score=346.69 Aligned_cols=218 Identities=25% Similarity=0.342 Sum_probs=180.2
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++|+++.|+... .....+|+|||++|++|+++||+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 489999999885210 012359999999999999999999999999999999999876 5689999999765
Q ss_pred Cc-------------------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc
Q 001293 935 KQ-------------------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN 993 (1106)
Q Consensus 935 ~~-------------------~~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~ 993 (1106)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++....+.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23467899999987 3444 59999998875322 223444455688899999996
Q ss_pred -cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHH
Q 001293 994 -PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1072 (1106)
Q Consensus 994 -~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~ 1072 (1106)
++.+.. +.+||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455544 4679999999999999999999999999999999999999999999998777999999999987 477
Q ss_pred HhcCeEEEEecCCEEEEecCC
Q 001293 1073 EAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1073 ~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
+.||++++|++ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999986 589998875
No 186
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4e-38 Score=314.13 Aligned_cols=210 Identities=22% Similarity=0.382 Sum_probs=180.6
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc----ceEEEEcCCCCCC
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1106)
+++++++|||+.+++||+++|+|||||||||.+.++.|+.+|+ +|+|.+||.+++.+... .-+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4567999999999999999999999999999999999999999 99999999999877653 3589999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
-.+||+|||......+....+ ..+.+...+.+|+.+++.++++..-
T Consensus 92 r~LtV~dNi~~vlE~~~~d~~--------------------------------~~~~~~~l~~LL~ef~i~hlr~~~a-- 137 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDLK--------------------------------KAERKEELDALLEEFHITHLRDSKA-- 137 (243)
T ss_pred hcCcHHHHHHHHHhhhhcchh--------------------------------HHHHHHHHHHHHHHhchHHHhcCcc--
Confidence 999999999876654321100 0112335678999999999998653
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
-.||||||+|+-|||||+.+|+.++||||++|+||-+..+|.+.++.+.. . +--|+..-|+..|+...|||.+++
T Consensus 138 ---~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-r-giGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 138 ---YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-R-GIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred ---cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-C-CceEEEccccHHHHHhhhheEEEE
Confidence 36999999999999999999999999999999999999999999998864 3 444455688999999999999999
Q ss_pred cCCeEEEEcChHHHHH
Q 001293 399 SDGQIVYQGPRELVLE 414 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1106)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999998864
No 187
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.4e-36 Score=337.86 Aligned_cols=206 Identities=21% Similarity=0.353 Sum_probs=171.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1106)
.+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|+..+++
T Consensus 21 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 97 (269)
T PRK11831 21 CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFT 97 (269)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCC
Confidence 4999999999999999999999999999999999999998 999999998875432 1356999999988889
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.++...... .. + ......+..+++.+||.+..++.+
T Consensus 98 ~~tv~enl~~~~~~~~~-~~-----~---------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 141 (269)
T PRK11831 98 DMNVFDNVAYPLREHTQ-LP-----A---------------------------PLLHSTVMMKLEAVGLRGAAKLMP--- 141 (269)
T ss_pred CCCHHHHHHHHHHHccC-CC-----H---------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 99999999886432100 00 0 001123456788999987777654
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.... +++|+.++|+..++.++||+|++|+
T Consensus 142 --~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~v~~l~ 218 (269)
T PRK11831 142 --SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSAL-GVTCVVVSHDVPEVLSIADHAYIVA 218 (269)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhhCEEEEEE
Confidence 4699999999999999999999999999999999999999999999876532 4455557788889999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (269)
T PRK11831 219 DKKIVAHGSAQALQ 232 (269)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 188
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.8e-37 Score=387.47 Aligned_cols=253 Identities=24% Similarity=0.328 Sum_probs=194.6
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++....++|+.++++.++|. .. +....+.....++|+||++.++.
T Consensus 418 ~~~~~~~~~ri~~~l~~~~e~-----~~--~~~~~~~~~~~I~~~nvsf~Y~~--------------------------- 463 (686)
T TIGR03797 418 ILAVIPLWERAKPILEALPEV-----DE--AKTDPGKLSGAIEVDRVTFRYRP--------------------------- 463 (686)
T ss_pred HHHHHHHHHHHHHHhcCCccc-----cc--CcCCCCCCCceEEEEEEEEEcCC---------------------------
Confidence 567777788888877665441 00 00001112347999999999842
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
..+++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|+
T Consensus 464 -----~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 535 (686)
T TIGR03797 464 -----DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQN 535 (686)
T ss_pred -----CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccC
Confidence 1135999999999999999999999999999999999999998 9999999999887654 4789999997
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.+| +.|++|||.++.. ...+.+.++++. +++ ++. ...|++..||
T Consensus 536 ~~lf-~gTI~eNi~~~~~-----~~~e~i~~al~~---a~l------------------------~~~--i~~lp~G~dt 580 (686)
T TIGR03797 536 GRLM-SGSIFENIAGGAP-----LTLDEAWEAARM---AGL------------------------AED--IRAMPMGMHT 580 (686)
T ss_pred CccC-cccHHHHHhcCCC-----CCHHHHHHHHHH---cCc------------------------HHH--HHhccccccc
Confidence 7555 5799999998632 112222222221 111 111 1246778899
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+ ..||||||||++||||++++|++|+||||||+||+.++..|.+.|+++ ++|+|+ ++|. .++.+.||+
T Consensus 581 ~ige~G-~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr-~~~i~~~D~ 653 (686)
T TIGR03797 581 VISEGG-GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHR-LSTIRNADR 653 (686)
T ss_pred cccCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecC-hHHHHcCCE
Confidence 999875 479999999999999999999999999999999999999999999864 355555 4444 366788999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+++++|+++++++
T Consensus 654 Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 654 IYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999864
No 189
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.9e-37 Score=329.06 Aligned_cols=205 Identities=24% Similarity=0.343 Sum_probs=172.7
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.|+ +..+|+++||++++|+++||+|+||||||||+++|+|... +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 4677777664 2469999999999999999999999999999999999865 468999999987632
Q ss_pred -----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 937 -----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 937 -----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
..+++.++|++|++.+++.+|++||+.+...... ....+...+.++++++.+++.+..+.. +.+||+|
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHH
Confidence 2345789999999988888999999988642111 122333445678899999998766665 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
||||++||+||+.+|++|||||||+|||+.+++.+.+.|+++.++|+|||++||+++ ++.+.||++++|++|
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~g 211 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDDG 211 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877899999999987 577889999999875
No 190
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=338.02 Aligned_cols=203 Identities=26% Similarity=0.337 Sum_probs=169.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCC-CCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1106)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4999999999999999999999999999999999999998 9999999998764332 357999999853 55678
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.|+....+... .+....++.+++.+||.+..++.+
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 99999998754322100 001123567889999987776554
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++++. . +.+|+.++|+..++.++||+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 3 445566788888899999999999999
Q ss_pred eEEEEcChHHH
Q 001293 402 QIVYQGPRELV 412 (1106)
Q Consensus 402 ~iv~~G~~~~~ 412 (1106)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998754
No 191
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-37 Score=327.55 Aligned_cols=197 Identities=27% Similarity=0.415 Sum_probs=166.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+|
T Consensus 14 ~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 14 TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 4999999999999999999999999999999999999998 9999999987653 23567999999998889999999
Q ss_pred HHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCC
Q 001293 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1106)
|+.+.....+... .+....++++++.+||++..++.+ +.||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (210)
T cd03269 90 QLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EELS 130 (210)
T ss_pred HHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhCC
Confidence 9988654332100 001123567788999987766544 4699
Q ss_pred hhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001293 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1106)
|||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.+ . +.+|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 131 KGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 9999999999999999999999999999999999999999998754 3 4456667888888999999999999999987
Q ss_pred Ec
Q 001293 406 QG 407 (1106)
Q Consensus 406 ~G 407 (1106)
.|
T Consensus 209 ~~ 210 (210)
T cd03269 209 YG 210 (210)
T ss_pred cC
Confidence 65
No 192
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.9e-37 Score=334.29 Aligned_cols=214 Identities=29% Similarity=0.403 Sum_probs=171.7
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 35999999999999999999999999999999999999988 999999998876543 135799999998889
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++..... .. .... .+.. .......++.+++.+||.+..++.
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~---~~~~------~~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~--- 141 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--ST---WRSL------FGLF---------------PKEEKQRALAALERVGLLDKAYQR--- 141 (241)
T ss_pred ccCcHHHHHHhhhcccc--hh---hhhh------cccC---------------cHHHHHHHHHHHHHcCChhhhCCC---
Confidence 99999999987642110 00 0000 0000 000112456678899998666554
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+..|||||||||+||+||+.+|++|||||||+|||+.+...+.+.|++++...+ ++|+.++|+..++.+++|++++|
T Consensus 142 --~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 142 --ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 456999999999999999999999999999999999999999999998765334 45556788888999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 193
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-37 Score=343.78 Aligned_cols=205 Identities=26% Similarity=0.374 Sum_probs=169.3
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC-----------------------
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----------------------- 221 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----------------------- 221 (1106)
..+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999999998 9999999876421
Q ss_pred ----CcccceEEEEcCCC-CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHH
Q 001293 222 ----FVPQRTAAYISQHD-NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEAN 296 (1106)
Q Consensus 222 ----~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 296 (1106)
...++.+|||+|++ ..++..||+|||.|+....+... .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 01236799999985 35566899999998764432110 0112
Q ss_pred HHHHHHHHHcCCc-cccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 001293 297 VITDYYLKVLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSG 375 (1106)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~ 375 (1106)
..++.+++.+||+ +..++ .+..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~-----~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQR-----SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhC-----ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 2456788999996 45554 3457999999999999999999999999999999999999999999998763 3 4
Q ss_pred eEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChHHHH
Q 001293 376 TAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 376 t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1106)
.+|+.++|+..++.++||+|++|++|+++++|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55666888999999999999999999999999998874
No 194
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=8.9e-37 Score=331.78 Aligned_cols=217 Identities=24% Similarity=0.279 Sum_probs=172.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++||++.|+.. .....+|+|+||+|++|+++||+||||||||||+++|+|... +..|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5678888776411 001369999999999999999999999999999999999865 46899999998764
Q ss_pred c------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 001293 936 Q------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1106)
Q Consensus 936 ~------~~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~ 1006 (1106)
. ..+++.++|++|++ .+.+.+||+||+.+....... ....+.....++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456899999998 456679999999876543221 111111122235788999984 455544 35
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
.||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999987 57778999999986 5
Q ss_pred EEEEec
Q 001293 1086 QEIYVG 1091 (1106)
Q Consensus 1086 ~~~~~g 1091 (1106)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 777654
No 195
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=333.36 Aligned_cols=206 Identities=28% Similarity=0.416 Sum_probs=171.1
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1106)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 35999999999999999999999999999999999999998 9999999988754322 35799999999899999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc--ccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV--CADTMVGDE 319 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 319 (1106)
||+||+.++.+..+... .+....+.++++.+||+. ..++
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~----- 131 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADR----- 131 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhc-----
Confidence 99999998654322100 001123566788999975 4443
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQEL-GKTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 345799999999999999999999999999999999999999999999876532 4455557778888999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999988763
No 196
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=341.02 Aligned_cols=216 Identities=26% Similarity=0.378 Sum_probs=181.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+. +..+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~------------~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYSD------------GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeCC------------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 5889999988741 2359999999999999999999999999999999999876 5689999999876
Q ss_pred C-----cccccceEEEEccCCCC-CCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 001293 935 K-----QETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1106)
Q Consensus 935 ~-----~~~~~~~~gyv~q~~~~-~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~L 1008 (1106)
. ...+++.+||++|++.. ....|++||+.+..... ....+...+.++++++.++|.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 3 12355679999999742 34579999998864322 223344456688999999998877765 4579
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1009 SgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
|||||||++|||||+.+|+||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999765 899999999987 47778999999987 588
Q ss_pred EEecCCC
Q 001293 1088 IYVGPLG 1094 (1106)
Q Consensus 1088 ~~~g~~g 1094 (1106)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9998754
No 197
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-37 Score=342.04 Aligned_cols=218 Identities=25% Similarity=0.346 Sum_probs=180.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+... .....+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 57889988885210 011359999999999999999999999999999999999876 56899999998863
Q ss_pred c-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 001293 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1106)
Q Consensus 936 ~-------~~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~ 1005 (1106)
. ..+++.+||++|++ .+++ .||.||+.|+.... ..+.++.++.+.++++.++|. ++.+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23567899999987 3443 69999999875432 233445566788999999995 455544 4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
..||||||||++||++|+.+|+||||||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 679999999999999999999999999999999999999999999998877999999999986 57788999999986 6
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 899998753
No 198
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.7e-36 Score=335.48 Aligned_cols=216 Identities=20% Similarity=0.257 Sum_probs=180.6
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 478899988774 2469999999999999999999999999999999999865 4689999999765
Q ss_pred Cc----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccc-c
Q 001293 935 KQ----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-Q 997 (1106)
Q Consensus 935 ~~----------------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~-~ 997 (1106)
.. ..+++.++|++|++.+++.+|++||+.+...... ........+.+.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 2345679999999998888999999987542111 123334456688899999997653 4
Q ss_pred cccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCe
Q 001293 998 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1077 (1106)
Q Consensus 998 ~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~ 1077 (1106)
.. +..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++...||+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 33 4679999999999999999999999999999999999999999999999877999999999987 57778999
Q ss_pred EEEEecCCEEEEecCCC
Q 001293 1078 LFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1078 v~~l~~Gg~~~~~g~~g 1094 (1106)
+++|++ |++++.|+..
T Consensus 222 i~~l~~-G~i~~~~~~~ 237 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAPE 237 (257)
T ss_pred EEEEEC-CEEEEeCCHH
Confidence 999987 5888888743
No 199
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.1e-36 Score=329.48 Aligned_cols=208 Identities=24% Similarity=0.307 Sum_probs=174.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ +++.+|+|+||+|++|+++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788877763 12369999999999999999999999999999999999875 46899999998754
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.. .+++.++|++|++.+++.+|++||+.+....+. ...++....++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIAG---ASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 21 245679999999988888999999988654321 22333445678899999998766654 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++|.|||++||+++ ++.+.+|++++|++| ++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~G-~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSDG-HL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEECC-EE
Confidence 99999999999999999999999999999999999999999998777899999999987 577789999999875 54
No 200
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=344.57 Aligned_cols=217 Identities=22% Similarity=0.414 Sum_probs=173.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-------------------ccc
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------------------VPQ 225 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~ 225 (1106)
+++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999998 99999999886432 124
Q ss_pred ceEEEEcCCCC-CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 001293 226 RTAAYISQHDN-HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1106)
Q Consensus 226 ~~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1106)
+.++||+|++. .+...||+||+.|+....+.. . .+....++.+++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 67999999862 344569999999875332110 0 001123567788
Q ss_pred HcCCc-cccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEec
Q 001293 305 VLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQ 383 (1106)
Q Consensus 305 ~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q 383 (1106)
.+||+ ...++ .+..|||||||||+|||||+.+|++|||||||+|||+.++..+++.|+++.. . +++|+.++|
T Consensus 162 ~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 34443 3457999999999999999999999999999999999999999999998754 3 445566788
Q ss_pred ChhHHHhhcCeEEEEcCCeEEEEcChHHHHH---HHHhCCCCCCC
Q 001293 384 PAPETYDLFDDIILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1106)
Q Consensus 384 ~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~---~f~~~G~~~p~ 425 (1106)
+..++.++||+|++|++|++++.|+++++.. .++..|+.+|.
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 8888999999999999999999999988742 34445555544
No 201
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-36 Score=338.49 Aligned_cols=208 Identities=25% Similarity=0.345 Sum_probs=174.4
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCC
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1106)
..+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 4467999999999999999999999999999999999999998 9999999988754321 24799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+++.+||+||+.++....+... . .....++.+++.+||.+..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~------~----------------------------~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR------A----------------------------EREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH------H----------------------------HHHHHHHHHHHHcCCHhHhhCC
Confidence 88989999999998754332100 0 0112356678999998777765
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
++ .|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+..+ .+|+.++|+..++.+++|++
T Consensus 158 ~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQ-KTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEE
Confidence 54 6999999999999999999999999999999999999999999998765334 45555778888899999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+++++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 202
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=7.1e-37 Score=330.16 Aligned_cols=195 Identities=29% Similarity=0.404 Sum_probs=161.5
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc-------ccceEEEEcCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 45999999999999999999999999999999999999998 999999999876533 13579999999889
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.++....+... ......++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999998764332100 001123567788999987666544
Q ss_pred cccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001293 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1106)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+..+ ++|+.++|+..++. .||++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAG-TTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CeEEEEECCHHHHh-hhcEEEE
Confidence 46999999999999999999999999999999999999999999998765234 44555677777775 9999999
Q ss_pred EcCCeE
Q 001293 398 LSDGQI 403 (1106)
Q Consensus 398 L~~G~i 403 (1106)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 203
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-36 Score=351.96 Aligned_cols=208 Identities=26% Similarity=0.443 Sum_probs=174.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+|
T Consensus 17 ~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~t 93 (402)
T PRK09536 17 TVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFD 93 (402)
T ss_pred EEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCC
Confidence 5999999999999999999999999999999999999998 9999999998765432 467999999998889999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.++...... ..... .......++++++.+||.+..++.+ +
T Consensus 94 v~e~v~~~~~~~~~--~~~~~----------------------------~~~~~~~v~~~le~vgl~~~~~~~~-----~ 138 (402)
T PRK09536 94 VRQVVEMGRTPHRS--RFDTW----------------------------TETDRAAVERAMERTGVAQFADRPV-----T 138 (402)
T ss_pred HHHHHHhccchhcc--cccCC----------------------------CHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 99999986421100 00000 0011235678899999987777554 5
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||.|||||+++|++|||||||+|||+.++..+++.|+++++ .+ ++|+.++|+..++.++||++++|++|+
T Consensus 139 ~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 139 SLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999874 34 456667889999999999999999999
Q ss_pred EEEEcChHHHH
Q 001293 403 IVYQGPRELVL 413 (1106)
Q Consensus 403 iv~~G~~~~~~ 413 (1106)
+++.|++++++
T Consensus 217 iv~~G~~~ev~ 227 (402)
T PRK09536 217 VRAAGPPADVL 227 (402)
T ss_pred EEEecCHHHHh
Confidence 99999999864
No 204
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-37 Score=353.71 Aligned_cols=254 Identities=26% Similarity=0.375 Sum_probs=194.1
Q ss_pred hhHHHHHHhhhccccchHHHHHHHHHHHhh-cCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhc
Q 001293 80 ERQRLIDKLVKVTDVDNERFLLKLKNRIDR-VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRII 158 (1106)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 158 (1106)
...+..|+++...+.+++. ...-.. .-...|.++++.+||++.++.
T Consensus 286 ~g~aa~d~i~~~l~~~~~~-----~~~~~~~~~~~~~~~ei~~~~l~~~y~~---------------------------- 332 (559)
T COG4988 286 AGEAAADKLFTLLESPVAT-----PGSGEKAEVANEPPIEISLENLSFRYPD---------------------------- 332 (559)
T ss_pred hhhhHHHHHHHHhcCCCCC-----CCCccccccccCCCceeeecceEEecCC----------------------------
Confidence 4456666666666655541 111001 112346788999999998743
Q ss_pred CCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCC
Q 001293 159 PSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHD 235 (1106)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d 235 (1106)
. +++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+.. .+++++||+|++
T Consensus 333 ----g-~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p 404 (559)
T COG4988 333 ----G-KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNP 404 (559)
T ss_pred ----C-CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCC
Confidence 1 15899999999999999999999999999999999999998 999999999987765 358999999987
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+ +..|+||||.++.. ....+.+.++.++. .+.+.+.-++..||.
T Consensus 405 ~l-f~gTireNi~l~~~----~~s~e~i~~al~~a------------------------------~l~~~v~~p~GLdt~ 449 (559)
T COG4988 405 YL-FAGTIRENILLARP----DASDEEIIAALDQA------------------------------GLLEFVPKPDGLDTV 449 (559)
T ss_pred cc-ccccHHHHhhccCC----cCCHHHHHHHHHHh------------------------------cHHHhhcCCCcccch
Confidence 55 45799999998742 11122222221111 112222236678999
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
+|+.+ ++|||||+|||++|||++.+++++++||||++||.+++..|.+.|.++++ ++|+++ ++| +.+....+|+|
T Consensus 450 ige~G-~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itH-rl~~~~~~D~I 524 (559)
T COG4988 450 IGEGG-AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITH-RLEDAADADRI 524 (559)
T ss_pred hccCC-CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEc-ChHHHhcCCEE
Confidence 99765 57999999999999999999999999999999999999999999999764 355555 444 45677889999
Q ss_pred EEEcCCeEEEEcChHHHHH
Q 001293 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|+++++|.++++.+
T Consensus 525 ~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 525 VVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EEecCCceeccCCHHHHhh
Confidence 9999999999999999854
No 205
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.7e-37 Score=328.21 Aligned_cols=193 Identities=26% Similarity=0.374 Sum_probs=163.2
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc---ccccceEEEEccCCC-CCCCC
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDI-HSPFV 956 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~-~~~~~ 956 (1106)
..+|+|+||+|++|+++||+||||||||||+++|+|... +..|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999765 468999999987542 234567999999974 35678
Q ss_pred CHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCC
Q 001293 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1106)
Q Consensus 957 tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPts 1036 (1106)
|++||+.+....+. .........++++++.+++.+..+.. +..||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENLG---LPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987643221 22233345678899999998766654 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
|||+.++..+++.|+++.++|+|||++||+++ ++...||++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999987 577789999999875
No 206
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-36 Score=329.60 Aligned_cols=201 Identities=25% Similarity=0.346 Sum_probs=165.7
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 45999999999999999999999999999999999999998 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.+.....+... .+.+..++.+++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999998754321100 001123567888999987666544
Q ss_pred cccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001293 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1106)
..|||||||||+||++++.+|++|||||||+|||+.++..+.+.|+++.... +++|+.++|+..++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQ-GTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CCEEEEEeCCHHHHHh-hCEEEE
Confidence 4699999999999999999999999999999999999999999999876433 4455556777777665 589999
Q ss_pred EcCCeEEEEcCh
Q 001293 398 LSDGQIVYQGPR 409 (1106)
Q Consensus 398 L~~G~iv~~G~~ 409 (1106)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988864
No 207
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.9e-36 Score=344.46 Aligned_cols=208 Identities=23% Similarity=0.244 Sum_probs=173.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCC--C
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 236 (1106)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999998 999999999886543 235799999986 5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
+++.+||.||+.+..+....+.. ..+....++.+++.+||. ...+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~~--------------------------------~~~~~~~~~~~l~~vgl~~~~~~-- 156 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKLS--------------------------------RQEVKDRVKAMMLKVGLLPNLIN-- 156 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCCC--------------------------------HHHHHHHHHHHHHHcCCChHHhc--
Confidence 78899999999987543211000 001122456788999994 3444
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
+.+..|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 157 ---~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 157 ---RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQRE-MGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 445679999999999999999999999999999999999999999999988653 3456666899999999999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998874
No 208
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-36 Score=333.03 Aligned_cols=215 Identities=27% Similarity=0.377 Sum_probs=180.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++++++.++ ++.+|+|+||++++|+++||+|+||||||||+++|+|..+ +..|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67788887663 2469999999999999999999999999999999999865 46899999998764
Q ss_pred c----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 Q----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ...++.++|++|++.+++.+|++||+.+....+. ....+..+..++++++.+++.+..+.. +..||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 3 1234679999999988888999999987643221 122233445678899999997765554 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||++|||+|+.+|++|+|||||+|||+.++..+++.++++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998777999999999986 58889999999986 5888888
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+..
T Consensus 220 ~~~ 222 (241)
T PRK10895 220 TPT 222 (241)
T ss_pred CHH
Confidence 864
No 209
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=341.64 Aligned_cols=218 Identities=22% Similarity=0.323 Sum_probs=179.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+... .....+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67889988885210 011359999999999999999999999999999999999876 46899999998763
Q ss_pred c-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 001293 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1106)
Q Consensus 936 ~-------~~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~ 1005 (1106)
. ..+++.+|||+|++ .+++ .||.||+.|+.... ..+.++..+.+.++++.++|. +..+.. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23567899999986 3444 59999999875332 233444556788999999996 565554 4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.++++.+ .|+|||++||+++ ++.+.||++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 67999999999999999999999999999999999999999999999875 4899999999987 57789999999986
Q ss_pred CEEEEecCCC
Q 001293 1085 GQEIYVGPLG 1094 (1106)
Q Consensus 1085 g~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 222 G~i~~~g~~~ 231 (286)
T PRK13646 222 GSIVSQTSPK 231 (286)
T ss_pred CEEEEECCHH
Confidence 6898988753
No 210
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.8e-36 Score=329.48 Aligned_cols=205 Identities=26% Similarity=0.367 Sum_probs=169.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc--cceEEEEcCCCCCCCCCCH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP--QRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lTV 243 (1106)
++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+||
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 15 RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 5999999999999999999999999999999999999998 9999999988754322 2579999999888889999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+||+.+.....+... .+....++.+++.+||+...++.++ .
T Consensus 92 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 132 (236)
T TIGR03864 92 RQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR-----E 132 (236)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 999987654321100 0011235667888999877666554 6
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++++..+.| |+.++|+..++. .+|++++|++|++
T Consensus 133 LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-iii~sH~~~~~~-~~d~i~~l~~G~i 210 (236)
T TIGR03864 133 LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLS-VLWATHLVDEIE-ADDRLVVLHRGRV 210 (236)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCE-EEEEecChhhHh-hCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999999999876433444 555677777775 5999999999999
Q ss_pred EEEcChHHHHH
Q 001293 404 VYQGPRELVLE 414 (1106)
Q Consensus 404 v~~G~~~~~~~ 414 (1106)
++.|+.+++.+
T Consensus 211 ~~~~~~~~~~~ 221 (236)
T TIGR03864 211 LADGAAAELRG 221 (236)
T ss_pred EEeCCHHHHHH
Confidence 99999887654
No 211
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.9e-36 Score=333.08 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=177.0
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcCc
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1106)
+.++||++.|+ +..+|+|+||+|++||++||+|+||||||||+++|+|...+. ...|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788877764 235899999999999999999999999999999999976521 12899999998
Q ss_pred cCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc----cccccccCCC
Q 001293 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGLP 1003 (1106)
Q Consensus 933 ~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~----~~~~~~~g~~ 1003 (1106)
+... ...++.++|++|++.+++ .|++||+.+....+. ....+...+.++++++.+++. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999988888 999999998654332 122334455688899999997 444443
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999876 599999999987 57788999999987
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 588888875
No 212
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=340.18 Aligned_cols=207 Identities=21% Similarity=0.315 Sum_probs=170.0
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc-------ccceEEEEcCCC-C
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHD-N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 236 (1106)
+++|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++ .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999998 999999999875421 246799999985 2
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
.+...||+||+.|+....+... .+....++++++.+||. ...++.
T Consensus 97 ~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (286)
T PRK13646 97 QLFEDTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQS 142 (286)
T ss_pred ccchhhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3344699999998753322100 00112356788899996 455544
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+++|+|
T Consensus 143 -----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dri 216 (286)
T PRK13646 143 -----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADEV 216 (286)
T ss_pred -----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEE
Confidence 4579999999999999999999999999999999999999999999987643 3456666788888999999999
Q ss_pred EEEcCCeEEEEcChHHHHH
Q 001293 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|++++.|+++++.+
T Consensus 217 ~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 217 IVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999987643
No 213
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=340.08 Aligned_cols=217 Identities=24% Similarity=0.309 Sum_probs=181.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++|+++.|+.. ....+|+|+|++|++|+++||+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37889998887521 12359999999999999999999999999999999999876 5689999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..+++.+||++|++. .++..||+||+.|+.... ..+.++.++.++++++.++|.+..+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKERE-----PARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 566789999999875322 233444556789999999998877765 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++|||||+.+|+||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++ ..||++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 999999999986 35 67999999986 68888
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 221 ~g~~~ 225 (279)
T PRK13650 221 TSTPR 225 (279)
T ss_pred ECCHH
Confidence 88754
No 214
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-36 Score=334.43 Aligned_cols=207 Identities=21% Similarity=0.276 Sum_probs=176.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ ++.+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 488999988874 2359999999999999999999999999999999999865 4689999998764
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
. .+++.++|++|++.+++.+||+||+.+... . ..+..+.++++.+++.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~----~-----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK----G-----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc----c-----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 245679999999988888999999987521 0 1134578899999998776655 3579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|++|||+|+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999864 4899999999987 47788999999986 688888875
Q ss_pred C
Q 001293 1094 G 1094 (1106)
Q Consensus 1094 g 1094 (1106)
-
T Consensus 219 ~ 219 (257)
T PRK11247 219 D 219 (257)
T ss_pred c
Confidence 3
No 215
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-36 Score=314.11 Aligned_cols=212 Identities=25% Similarity=0.392 Sum_probs=177.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|++-.| +..++|++|||++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 5567776555 34689999999999999999999999999999999999876 45899999999976
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHc-CCccccccccCCCCCCCCCH
Q 001293 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 936 ~~----~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~-~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..++.++||||....|+.+||.|||..++..+.. ++.....++++.+.+ .|.+.++... ..|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~a-----G~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRA-----GTLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCcc-----cCCCh
Confidence 43 3456799999999999999999999988765432 111112266777776 3555555553 36999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
||||.|+|||||+.+|++|+|||||.||-|.-.+.|.+.|+++.++ |.||+++.++... ..+.+|+.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~-Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARF-ALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHH-HHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 7799999998764 7789999999986 69999
Q ss_pred ecCC
Q 001293 1090 VGPL 1093 (1106)
Q Consensus 1090 ~g~~ 1093 (1106)
.|+.
T Consensus 218 ~G~~ 221 (237)
T COG0410 218 SGTA 221 (237)
T ss_pred ecCH
Confidence 9984
No 216
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=323.05 Aligned_cols=195 Identities=41% Similarity=0.737 Sum_probs=166.7
Q ss_pred eEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHH
Q 001293 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1106)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1106)
.+.|+||++.++. ++..+.+|+|+|+.+++|++++|+|||||||||||++
T Consensus 3 ~~~~~~~~~~~~~------------------------------~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~ 52 (202)
T cd03233 3 TLSWRNISFTTGK------------------------------GRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKA 52 (202)
T ss_pred eEEEEccEEEecc------------------------------CCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHH
Confidence 4789999999854 1233569999999999999999999999999999999
Q ss_pred HhCCCC---CCCCceeEEEEcCccCCCC--cccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHh
Q 001293 198 LAGKLD---PTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKA 272 (1106)
Q Consensus 198 L~G~~~---~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 272 (1106)
|+|.++ |+ +|+|.++|+++... ..++.++|++|++.+++.+||+||+.++++..
T Consensus 53 l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~------------------ 111 (202)
T cd03233 53 LANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK------------------ 111 (202)
T ss_pred hcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc------------------
Confidence 999998 66 99999999987643 23467999999998999999999998754210
Q ss_pred cCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCC
Q 001293 273 AGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEIST 352 (1106)
Q Consensus 273 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEpts 352 (1106)
.+..+..||||||||++||+||+.+|+++||||||+
T Consensus 112 --------------------------------------------~~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~ 147 (202)
T cd03233 112 --------------------------------------------GNEFVRGISGGERKRVSIAEALVSRASVLCWDNSTR 147 (202)
T ss_pred --------------------------------------------cccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCc
Confidence 112334699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEc
Q 001293 353 GLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1106)
Q Consensus 353 gLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1106)
|||+.++..+.+.|+++....+.++|+++||+..++.+++|++++|++|++++.|
T Consensus 148 ~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 148 GLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999998865335677787888888999999999999999998765
No 217
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.1e-36 Score=334.30 Aligned_cols=212 Identities=27% Similarity=0.379 Sum_probs=170.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 16 QALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 4999999999999999999999999999999999999998 999999998875432 2457999999988899
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.++..... ... .... +. ........++.+++.+||.+..+..
T Consensus 93 ~~tv~~~l~~~~~~~~--~~~---~~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~---- 142 (243)
T TIGR02315 93 RLTVLENVLHGRLGYK--PTW---RSLL------GR---------------FSEEDKERALSALERVGLADKAYQR---- 142 (243)
T ss_pred cccHHHHHhhcccccc--cch---hhhh------cc---------------ccHHHHHHHHHHHHHcCcHhhhcCC----
Confidence 9999999987532110 000 0000 00 0001122456778899998766654
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
+..|||||||||+||+||+.+|++|+|||||+|||+.+...+.+.|+++.+.. +++|+.++|+..++.++||++++|+
T Consensus 143 -~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~tH~~~~~~~~~d~v~~l~ 220 (243)
T TIGR02315 143 -ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKED-GITVIINLHQVDLAKKYADRIVGLK 220 (243)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEE
Confidence 45699999999999999999999999999999999999999999999876533 4455557788888899999999999
Q ss_pred CCeEEEEcChHHH
Q 001293 400 DGQIVYQGPRELV 412 (1106)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1106)
+|++++.|+++++
T Consensus 221 ~G~i~~~~~~~~~ 233 (243)
T TIGR02315 221 AGEIVFDGAPSEL 233 (243)
T ss_pred CCEEEecCCHHHh
Confidence 9999999998765
No 218
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.5e-36 Score=325.22 Aligned_cols=194 Identities=27% Similarity=0.406 Sum_probs=164.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-cccceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-VPQRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++||+|++.+++.+||+
T Consensus 14 ~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 14 RVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred EeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 5999999999999999999999999999999999999998 99999999876532 1235799999998889899999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.+.....+. . +..++.+++.+||++..++.+ ..|
T Consensus 91 e~l~~~~~~~~~--~------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~L 127 (208)
T cd03268 91 ENLRLLARLLGI--R------------------------------------KKRIDEVLDVVGLKDSAKKKV-----KGF 127 (208)
T ss_pred HHHHHHHHhcCC--c------------------------------------HHHHHHHHHHcCCHHHHhhhH-----hhC
Confidence 999886532210 0 112456788899987666554 469
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+ .+++.++|+..++.+++|++++|++|+++
T Consensus 128 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~v~~l~~g~i~ 205 (208)
T cd03268 128 SLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QG-ITVLISSHLLSEIQKVADRIGIINKGKLI 205 (208)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEcCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998764 34 44555778888899999999999999998
Q ss_pred EEc
Q 001293 405 YQG 407 (1106)
Q Consensus 405 ~~G 407 (1106)
+.|
T Consensus 206 ~~g 208 (208)
T cd03268 206 EEG 208 (208)
T ss_pred ecC
Confidence 765
No 219
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.7e-36 Score=327.31 Aligned_cols=198 Identities=31% Similarity=0.454 Sum_probs=166.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC--cccceEEEEcCCCCCCCCCCH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~lTV 243 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999998 99999999887542 124679999999988898999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+||+.+.....+... .+....++++++.+||++..+..+ +.
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999988654322100 001124567889999987766544 46
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. . +.+||.++|+..++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 44555677888899999999999999999
Q ss_pred EEEc
Q 001293 404 VYQG 407 (1106)
Q Consensus 404 v~~G 407 (1106)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 220
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.9e-36 Score=343.07 Aligned_cols=214 Identities=21% Similarity=0.245 Sum_probs=175.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCC--
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD-- 235 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1106)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 469999999999999999999999999999999999998742238999999998865432 14799999997
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+.+.+||.+++.+.....+.... .+....+.++|+.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~~---------------------------------~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMSK---------------------------------AEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCCChHHH-
Confidence 688999999999876543210000 0112245667889999754332
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
+ ++.+.+|||||||||+||+||+.+|++||+||||+|||..++.+|++.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3567789999999999999999999999999999999999999999999998653 3566677889999999999999
Q ss_pred EEEcCCeEEEEcChHHHHH
Q 001293 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 221
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.4e-36 Score=333.34 Aligned_cols=215 Identities=22% Similarity=0.302 Sum_probs=180.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++||++.|+ +..+|+|+||+|++||+++|+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 35788887764 2369999999999999999999999999999999999875 46899999998653
Q ss_pred c----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccc
Q 001293 936 Q----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSL 999 (1106)
Q Consensus 936 ~----------------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~ 999 (1106)
. ..+++.++|++|++.+++..|+.||+.++.... .....+...+.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 134567999999998888899999998754221 1123344456688999999998776654
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeE
Q 001293 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1106)
Q Consensus 1000 ~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1078 (1106)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998764 899999999987 577889999
Q ss_pred EEEecCCEEEEecCCC
Q 001293 1079 FLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1079 ~~l~~Gg~~~~~g~~g 1094 (1106)
++|++ |++++.|+..
T Consensus 218 ~~l~~-G~i~~~g~~~ 232 (252)
T TIGR03005 218 CFFDK-GRIVEQGKPD 232 (252)
T ss_pred EEEEC-CEEEEeCCHH
Confidence 99986 5888888754
No 222
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=3.2e-36 Score=329.02 Aligned_cols=213 Identities=26% Similarity=0.376 Sum_probs=176.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ ++.+|+|+||+|++|+++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 45678877663 2469999999999999999999999999999999999865 46899999998754
Q ss_pred cc--cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 936 QE--TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 936 ~~--~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
.. ...+.++|++|++.+++.+|++||+.+....+ ....+...+.+.++++.+++.+..+.. +..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDK-----VRELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCC-----hhhCCHHHH
Confidence 21 22357999999988888899999998765432 122333445678899999998766654 357999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
||++|||||+.+|++|||||||+|||+.++..+++.|+++++ +|+|||++||+++ ++. .+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~-~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EIE-ADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hHh-hCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999874 5899999999987 354 5999999986 58888887
Q ss_pred CC
Q 001293 1093 LG 1094 (1106)
Q Consensus 1093 ~g 1094 (1106)
..
T Consensus 216 ~~ 217 (236)
T TIGR03864 216 AA 217 (236)
T ss_pred HH
Confidence 53
No 223
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=331.60 Aligned_cols=213 Identities=22% Similarity=0.334 Sum_probs=177.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
-+.++|+++.++ +..+|+|+||+|++||+++|+|+||||||||+++|+|..+ +..|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 378899988764 2369999999999999999999999999999999999865 4689999999876
Q ss_pred Ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHc-CCccccccccCCCCCCCCC
Q 001293 935 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 935 ~~~----~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~-~l~~~~~~~~g~~g~~~LS 1009 (1106)
... ..++.++|++|++.+++..||.||+.+..... ..+...+.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 432 24567999999998888899999998764221 1122234466777777 465554443 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
+|||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999998877999999999987 58899999999986 68999
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 218 ~~~~~ 222 (237)
T PRK11614 218 EDTGD 222 (237)
T ss_pred eCCHH
Confidence 98864
No 224
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-37 Score=350.74 Aligned_cols=256 Identities=22% Similarity=0.331 Sum_probs=195.9
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++...+..|+-++.+++++... +.-..+.+...+.++||+|+++.
T Consensus 303 lgq~~~Sa~Rl~~i~~q~~e~~~-------~~~~~~~~~~~l~~~~vsF~y~~--------------------------- 348 (573)
T COG4987 303 LGQVIASARRLNDILDQKPEVTF-------PDEQTATTGQALELRNVSFTYPG--------------------------- 348 (573)
T ss_pred hhHHHHHHHHHhhhccCCcccCC-------CccccCCccceeeeccceeecCC---------------------------
Confidence 45667777777777777776211 11112222226899999999864
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
.+.++|+|+|+++++||.+||+|+||||||||+++|+|-++|+ +|+|+.||.++..... ++.+++++|.
T Consensus 349 -----~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr 420 (573)
T COG4987 349 -----QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQR 420 (573)
T ss_pred -----CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccc
Confidence 1234999999999999999999999999999999999999999 9999999999877655 4689999995
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
.|++..|+|+||.++.. ....|.+.++.+. .++ ++. ..+.++..||
T Consensus 421 -~hlF~~Tlr~NL~lA~~----~AsDEel~~aL~q---vgL------------------------~~l--~~~~p~gl~t 466 (573)
T COG4987 421 -VHLFSGTLRDNLRLANP----DASDEELWAALQQ---VGL------------------------EKL--LESAPDGLNT 466 (573)
T ss_pred -hHHHHHHHHHHHhhcCC----CCCHHHHHHHHHH---cCH------------------------HHH--HHhChhhhhc
Confidence 67788899999998642 2222222222111 110 111 1234567789
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+. .||||||||++|||+|++++++++|||||.|||+.|+.++++.|.+-+ .++|+++ ++|+.. -.+.||+
T Consensus 467 ~lge~G~-~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~-vTHrL~-~le~~dr 541 (573)
T COG4987 467 WLGEGGR-RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLM-VTHRLR-GLERMDR 541 (573)
T ss_pred hhccCCC-cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEE-Eecccc-cHhhcCE
Confidence 9997654 699999999999999999999999999999999999999999997643 4566666 555543 3578999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+++++|.+.++++
T Consensus 542 Iivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 542 IIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEECCeeeecCCHHhhhc
Confidence 99999999999999999865
No 225
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=338.96 Aligned_cols=219 Identities=24% Similarity=0.292 Sum_probs=179.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+.+. ...+.+|+|||++|++||++||+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888888774210 001358999999999999999999999999999999999876 56899999998753
Q ss_pred c-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 001293 936 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1106)
Q Consensus 936 ~-------~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~ 1006 (1106)
. ...++.+||++|++. ....+||.||+.|+...+ ....++..+.++++++.++|. ++.+.. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----PF 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----cc
Confidence 2 234567999999973 233579999998765332 123344456688999999996 566655 45
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
.||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++|.|||++||+++ ++.+.||++++|++ |+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~ 222 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GK 222 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999777999999999987 57889999999986 68
Q ss_pred EEEecCCC
Q 001293 1087 EIYVGPLG 1094 (1106)
Q Consensus 1087 ~~~~g~~g 1094 (1106)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (287)
T PRK13641 223 LIKHASPK 230 (287)
T ss_pred EEEeCCHH
Confidence 88888754
No 226
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.5e-36 Score=326.68 Aligned_cols=211 Identities=25% Similarity=0.321 Sum_probs=172.2
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++||++.|+.. .+...+|+|+||+|++|++++|+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4678888776421 012469999999999999999999999999999999999865 46899999998754
Q ss_pred cc---c---cc-ceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 001293 936 QE---T---FA-RISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1106)
Q Consensus 936 ~~---~---~~-~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~L 1008 (1106)
.. . ++ +.++|++|++.+++.+|++||+.+....+. .......+.+.++++.+++.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHR-----PSEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 21 1 22 569999999988888999999988654322 12233345678899999998776655 3579
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1009 SgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
|||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.+ .|+|||++||+++ .+ +.+|++++|++| ++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~G-~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKDG-QL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeCC-Ee
Confidence 99999999999999999999999999999999999999999999875 4899999999986 34 558999999864 55
Q ss_pred E
Q 001293 1088 I 1088 (1106)
Q Consensus 1088 ~ 1088 (1106)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 3
No 227
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.2e-36 Score=328.02 Aligned_cols=204 Identities=34% Similarity=0.537 Sum_probs=164.7
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGE 240 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 240 (1106)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 77 99999999887543445789999999989999
Q ss_pred CCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHH-HHHHcCCccccccccccc
Q 001293 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~ 319 (1106)
+||+||+.|+.......... ... .....+. .++.+++.+..++.
T Consensus 96 ~tv~enl~~~~~~~~~~~~~---~~~----------------------------~~~~~~~~~l~~~~l~~~~~~~---- 140 (226)
T cd03234 96 LTVRETLTYTAILRLPRKSS---DAI----------------------------RKKRVEDVLLRDLALTRIGGNL---- 140 (226)
T ss_pred CcHHHHHHHHHHhhcccccc---hHH----------------------------HHHHHHHHHHHhhcchhhhccc----
Confidence 99999999876433211000 000 0011233 67788887655544
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++..++.++||++++|+
T Consensus 141 -~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 141 -VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred -ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999998754 355666554444468999999999999
Q ss_pred CCeEEEEc
Q 001293 400 DGQIVYQG 407 (1106)
Q Consensus 400 ~G~iv~~G 407 (1106)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 228
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3e-36 Score=332.20 Aligned_cols=204 Identities=25% Similarity=0.387 Sum_probs=170.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-----------cccceEEEEcCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----------VPQRTAAYISQH 234 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 234 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 4999999999999999999999999999999999999988 99999999887532 123579999999
Q ss_pred CCCCCCCCHHHHHHHHHHh-cCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 001293 235 DNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
+.+++.+||+||+.++... .+. .. .+....++.+++.+||+...|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE-PK---------------------------------EEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC-CH---------------------------------HHHHHHHHHHHHHcCCcchhh
Confidence 8888899999999886421 110 00 001123566788899987666
Q ss_pred cccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001293 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1106)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1106)
+.+ +.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. .+ .+|+.++|+..++.+++|
T Consensus 140 ~~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SYP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EK-RTMVIVTHEMSFARDVAD 212 (250)
T ss_pred CCh-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhcC
Confidence 544 56999999999999999999999999999999999999999999998764 34 455557888889999999
Q ss_pred eEEEEcCCeEEEEcChHHHH
Q 001293 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 229
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.5e-36 Score=329.60 Aligned_cols=204 Identities=20% Similarity=0.345 Sum_probs=170.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGE 240 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~ 240 (1106)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.
T Consensus 15 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 15 QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 4999999999999999999999999999999999999998 99999999987542 124579999999888889
Q ss_pred CCHHHHHHHHHHh-cCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 241 MTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
+||+||+.|+... .+... .+....++++++.+||+...+..+
T Consensus 92 ~tv~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 134 (240)
T PRK09493 92 LTALENVMFGPLRVRGASK----------------------------------EEAEKQARELLAKVGLAERAHHYP--- 134 (240)
T ss_pred CcHHHHHHhHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChHHHhcCh---
Confidence 9999999886421 11000 001123567788999986666544
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++.. .+ ++|+.++|+..++.++||++++|+
T Consensus 135 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~ 210 (240)
T PRK09493 135 --SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EG-MTMVIVTHEIGFAEKVASRLIFID 210 (240)
T ss_pred --hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998753 34 455567788889999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (240)
T PRK09493 211 KGRIAEDGDPQVLI 224 (240)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 230
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=4.1e-37 Score=344.50 Aligned_cols=238 Identities=29% Similarity=0.433 Sum_probs=193.6
Q ss_pred HhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcC
Q 001293 107 IDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGP 186 (1106)
Q Consensus 107 ~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp 186 (1106)
.+++.+|-|+..+..|++++-- ...++++|+|+||.+.+|+-++|+||
T Consensus 323 ~~~m~LP~P~g~L~Ve~l~~~P--------------------------------Pg~~~pil~~isF~l~~G~~lgIIGP 370 (580)
T COG4618 323 AERMPLPAPQGALSVERLTAAP--------------------------------PGQKKPILKGISFALQAGEALGIIGP 370 (580)
T ss_pred cCCCCCCCCCceeeEeeeeecC--------------------------------CCCCCcceecceeEecCCceEEEECC
Confidence 3467888899999999999831 11346799999999999999999999
Q ss_pred CCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCccc---ceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCchhhhh
Q 001293 187 PSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEML 263 (1106)
Q Consensus 187 ~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~ 263 (1106)
||||||||.++|.|..+|. +|.|.+||.+++++++. +.+||.||+ +-++..||.|||. |+.. ....+.+
T Consensus 371 SgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQd-VeLF~GTIaeNIa---Rf~~-~~d~~kI 442 (580)
T COG4618 371 SGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQD-VELFDGTIAENIA---RFGE-EADPEKV 442 (580)
T ss_pred CCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCccc-ceecCCcHHHHHH---hccc-cCCHHHH
Confidence 9999999999999999998 99999999999888764 889999995 4555679999995 3221 1122333
Q ss_pred HHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCc
Q 001293 264 TELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPAL 343 (1106)
Q Consensus 264 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~ 343 (1106)
.++++.... | |- ++.|++.+||.||+.+. +||||||||+++||||+++|.
T Consensus 443 ieAA~lAgv----------------------H----el---Il~lP~GYdT~iG~~G~-~LSgGQRQRIaLARAlYG~P~ 492 (580)
T COG4618 443 IEAARLAGV----------------------H----EL---ILRLPQGYDTRIGEGGA-TLSGGQRQRIALARALYGDPF 492 (580)
T ss_pred HHHHHHcCh----------------------H----HH---HHhCcCCccCccCCCCC-CCCchHHHHHHHHHHHcCCCc
Confidence 333332211 1 11 56799999999998765 799999999999999999999
Q ss_pred cceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChHHHHHHHH
Q 001293 344 ALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFA 417 (1106)
Q Consensus 344 vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~ 417 (1106)
+++||||-|+||+.....+.+.|.+... .++|+|+. + |++.+...+|+|++|++|++-.+|+++|++....
T Consensus 493 lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvvi-a-HRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~~ 563 (580)
T COG4618 493 LVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVI-A-HRPSALASVDKILVLQDGRIAAFGPREEVLAKVL 563 (580)
T ss_pred EEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEE-e-cCHHHHhhcceeeeecCChHHhcCCHHHHHHHhc
Confidence 9999999999999999999999988643 45555553 3 3678999999999999999999999999987643
No 231
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=335.43 Aligned_cols=205 Identities=27% Similarity=0.384 Sum_probs=169.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCC-CCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|+++|+++..... ++.++|++|++. .++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 4999999999999999999999999999999999999998 9999999998765332 357999999863 67788
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++.+..+... .+....++++++.+||.+..++.+
T Consensus 98 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13635 98 TVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREP----- 138 (279)
T ss_pred cHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----
Confidence 99999998754322100 001224577888999987776655
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
..|||||||||+||++|+.+|++|||||||+|||+.++..+++.|+++.. ..+++|+.++|+..++. .||+|++|++|
T Consensus 139 ~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~~~~tilivsH~~~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 139 HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKE-QKGITVLSITHDLDEAA-QADRVIVMNKG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHH-cCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998765 32444555667777775 59999999999
Q ss_pred eEEEEcChHHHHH
Q 001293 402 QIVYQGPRELVLE 414 (1106)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1106)
++++.|+.+++..
T Consensus 217 ~i~~~g~~~~~~~ 229 (279)
T PRK13635 217 EILEEGTPEEIFK 229 (279)
T ss_pred EEEEECCHHHHhc
Confidence 9999999988753
No 232
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.1e-37 Score=384.88 Aligned_cols=258 Identities=26% Similarity=0.395 Sum_probs=197.5
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++.+..++|+.++++.++|. .........+....+++|+|+++.++.
T Consensus 428 ~~~~~~~~~ri~~il~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~Y~~--------------------------- 475 (694)
T TIGR03375 428 YQQAKTALQSLDELMQLPVER-----PEGTRFLHRPRLQGEIEFRNVSFAYPG--------------------------- 475 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCCCccceEEEEEEEEEeCC---------------------------
Confidence 667888889998888776541 000000001112347999999999842
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
..+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 476 -----~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~ 547 (694)
T TIGR03375 476 -----QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQD 547 (694)
T ss_pred -----CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCC
Confidence 1134999999999999999999999999999999999999998 9999999999887654 5789999998
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.+| +.|++|||.++.. ....+.+.++++. .+ .+.. .-.|++..||
T Consensus 548 ~~lf-~~TI~eNi~~~~~----~~~~~~i~~a~~~---~~------------------------l~~~--i~~lp~gl~T 593 (694)
T TIGR03375 548 PRLF-YGTLRDNIALGAP----YADDEEILRAAEL---AG------------------------VTEF--VRRHPDGLDM 593 (694)
T ss_pred hhhh-hhhHHHHHhCCCC----CCCHHHHHHHHHH---cC------------------------hHHH--HHhCcccccc
Confidence 7555 5799999987631 1111222222211 11 1111 1247788999
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+. .||||||||++||||++.+|++++||||||+||+.++..|.+.|+++. .++|+|+. +|.. ++.+.||+
T Consensus 594 ~i~e~G~-~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~iiI-tHrl-~~~~~~D~ 668 (694)
T TIGR03375 594 QIGERGR-SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVLV-THRT-SLLDLVDR 668 (694)
T ss_pred eecCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEEE-ecCH-HHHHhCCE
Confidence 9998764 699999999999999999999999999999999999999999998764 34566554 4443 56789999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+++++|+++++++
T Consensus 669 iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 669 IIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999865
No 233
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.4e-36 Score=342.37 Aligned_cols=230 Identities=21% Similarity=0.232 Sum_probs=183.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
-+.++|++.+++............+...+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 37888888776532100000000123579999999999999999999999999999999999876 4689999999876
Q ss_pred Ccc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 001293 935 KQE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1106)
Q Consensus 935 ~~~------~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~ 1005 (1106)
... .+++.++||+|++ .++|.+||.|++.+...... .....++.++.+.++++.++|. ...+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2456799999997 57788999999988654321 1234455566788999999995 344444 4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
.+||||||||++|||||+.+|++|||||||+|||+.++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|++
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999998764 899999999987 47788999999986
Q ss_pred CEEEEecCCC
Q 001293 1085 GQEIYVGPLG 1094 (1106)
Q Consensus 1085 g~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 238 G~ive~g~~~ 247 (331)
T PRK15079 238 GHAVELGTYD 247 (331)
T ss_pred CEEEEEcCHH
Confidence 6999998753
No 234
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-36 Score=334.61 Aligned_cols=219 Identities=22% Similarity=0.264 Sum_probs=179.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++ +.++|+|+||++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 377889887763 2469999999999999999999999999999999999865 5689999999876
Q ss_pred Ccc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhcCC----------C--CCChHHHHHHHHHHHHHcCCcccccc
Q 001293 935 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLS----------P--EVDSETRKMFIDEVMELVELNPLRQS 998 (1106)
Q Consensus 935 ~~~---~-~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~----------~--~~~~~~~~~~v~~~l~~~~l~~~~~~ 998 (1106)
... . .+..++|++|++.+++.+|++||+.++...... . ..........+.++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233589999999999999999999986431100 0 00111233457788999999876665
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCe
Q 001293 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1077 (1106)
Q Consensus 999 ~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~ 1077 (1106)
. +..||||||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 3579999999999999999999999999999999999999999999998765 899999999987 57788999
Q ss_pred EEEEecCCEEEEecCCCC
Q 001293 1078 LFLMKRGGQEIYVGPLGR 1095 (1106)
Q Consensus 1078 v~~l~~Gg~~~~~g~~g~ 1095 (1106)
+++|++ |++++.|+..+
T Consensus 224 i~~l~~-g~i~~~~~~~~ 240 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPEE 240 (255)
T ss_pred EEEEEC-CeEEecCCHHH
Confidence 999986 58889888653
No 235
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=349.35 Aligned_cols=206 Identities=24% Similarity=0.333 Sum_probs=175.1
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
..+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 45899999999999999999999999999999999999998 9999999998765432 2479999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.|+....+.... +....++++++.+||.+..++.+
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~~----------------------------------~~~~~~~e~L~~~gL~~~~~~~~- 162 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINAE----------------------------------ERREKALDALRQVGLENYAHSYP- 162 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCHH----------------------------------HHHHHHHHHHHHcCCChhhhcCc-
Confidence 9999999999998654332100 01123567889999987666544
Q ss_pred cccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001293 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1106)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|+|++
T Consensus 163 ----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~v 237 (400)
T PRK10070 163 ----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIAI 237 (400)
T ss_pred ----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEEE
Confidence 5699999999999999999999999999999999999999999999876533 44555578888999999999999
Q ss_pred EcCCeEEEEcChHHHH
Q 001293 398 LSDGQIVYQGPRELVL 413 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1106)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999998764
No 236
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.7e-37 Score=375.06 Aligned_cols=256 Identities=24% Similarity=0.379 Sum_probs=192.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++..+..+|+.++++.+++ ..+. ..........+++|+|+++.++.
T Consensus 304 ~~~~~~s~~ri~~ll~~~~~-----~~~~-~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 350 (574)
T PRK11160 304 LGQVIASARRINEITEQKPE-----VTFP-TTSTAAADQVSLTLNNVSFTYPD--------------------------- 350 (574)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----CCCC-cccCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 35667777777777765543 1100 00001122457999999998732
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
.++++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|++||.++.+... ++.++||+|+
T Consensus 351 -----~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~ 422 (574)
T PRK11160 351 -----QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQR 422 (574)
T ss_pred -----CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEccc
Confidence 1124999999999999999999999999999999999999998 9999999999877654 4679999998
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.+| +.|++||+.++.. ....+.+.++.+. .++ ++. .-. ++..||
T Consensus 423 ~~lf-~~ti~~Ni~~~~~----~~~~~~i~~al~~---~~l------------------------~~~--i~~-p~GldT 467 (574)
T PRK11160 423 VHLF-SATLRDNLLLAAP----NASDEALIEVLQQ---VGL------------------------EKL--LED-DKGLNA 467 (574)
T ss_pred chhh-cccHHHHhhcCCC----ccCHHHHHHHHHH---cCC------------------------HHH--HcC-ccccCc
Confidence 7555 5799999988641 1111111211111 110 111 123 677899
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.||+.+. .||||||||++||||++++|++|+||||||+||+.++..|.+.|++.. .++|+|++. |.. +....||+
T Consensus 468 ~vge~g~-~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviiit-Hr~-~~~~~~d~ 542 (574)
T PRK11160 468 WLGEGGR-QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMIT-HRL-TGLEQFDR 542 (574)
T ss_pred hhcCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEEe-cCh-hHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999999998863 355666644 443 44567999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|++++.|+++++++
T Consensus 543 i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 543 ICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999998864
No 237
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-36 Score=336.65 Aligned_cols=214 Identities=23% Similarity=0.317 Sum_probs=178.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.++ ++..+|+||||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56788877763 12358999999999999999999999999999999999865 46899999998764
Q ss_pred c----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 936 Q----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 936 ~----~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
. ...++.+||++|++. .+...|+.||+.|..... ..+.+..++.+.++++.+++.+..+.. +..||+
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRS-----PKTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----cccCCH
Confidence 2 234567999999975 355689999998865322 123444456688899999998877765 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
|||||++||+||+.+|+||||||||+|||+.++..+++.|+++.++|+|||++||+++ ++ +.||++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999998777999999999987 45 66999999986 588888
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 217 g~~~ 220 (274)
T PRK13644 217 GEPE 220 (274)
T ss_pred CCHH
Confidence 8754
No 238
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-36 Score=324.43 Aligned_cols=196 Identities=30% Similarity=0.452 Sum_probs=165.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc--ccceEEEEcCCCCCCCCCCH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1106)
++|+|+|+++++| +++|+|||||||||||++|+|+++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 5999999999999 99999999999999999999999998 999999998875432 24679999999988999999
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+||+.+.....+... .+....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----GS 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----hh
Confidence 999998654322100 001123567788999987777655 46
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 5566678888889899999999999999
Q ss_pred EEEc
Q 001293 404 VYQG 407 (1106)
Q Consensus 404 v~~G 407 (1106)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 239
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.7e-36 Score=325.70 Aligned_cols=208 Identities=25% Similarity=0.340 Sum_probs=176.6
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ +..+|+|+||++++|++++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4667766553 2469999999999999999999999999999999999765 568999999987643
Q ss_pred ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHH
Q 001293 937 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1016 (1106)
Q Consensus 937 ~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl 1016 (1106)
.. .+.++|++|++.+++.+|++||+.+....+. .. +..+.++++.+++.+..+.. +..||+|||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKK-----AKQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhh-----HhhCCHHHHHHH
Confidence 22 2579999999988888999999987654332 11 23467899999998776665 357999999999
Q ss_pred HHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1017 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1017 ~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
+|||||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|+.-
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999998777899999999987 57789999999986 5899999864
No 240
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.4e-36 Score=324.56 Aligned_cols=192 Identities=27% Similarity=0.365 Sum_probs=160.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCC-CCCCCCH
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDN-HIGEMTV 243 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 243 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 35999999999999999999999999999999999999998 9999999988754333467999999863 4557899
Q ss_pred HHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccC
Q 001293 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1106)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1106)
+||+.++....+ . ....++++++.+||.+..++.+ ..
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHP-----LS 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCc-----hh
Confidence 999987643211 0 0013456788999987776554 46
Q ss_pred CChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeE
Q 001293 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1106)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1106)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ .+|+.++|+..++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QG-KAVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 34 4455577888888899999999999997
Q ss_pred E
Q 001293 404 V 404 (1106)
Q Consensus 404 v 404 (1106)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 241
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2e-36 Score=348.83 Aligned_cols=215 Identities=26% Similarity=0.407 Sum_probs=182.6
Q ss_pred CCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEc
Q 001293 851 FEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS 930 (1106)
Q Consensus 851 ~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~ 930 (1106)
..+..+..+|++|.|+. ++++++|+|++++||+.+||+|+||||||||+++|+|..+ +.+|+|.+|
T Consensus 316 ~~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vn 381 (559)
T COG4988 316 EPPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVN 381 (559)
T ss_pred CCCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEEC
Confidence 34556777799999862 2379999999999999999999999999999999999877 468999999
Q ss_pred CccCC---cccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCC-----
Q 001293 931 GYPKK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGL----- 1002 (1106)
Q Consensus 931 g~~~~---~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~----- 1002 (1106)
|.+.. ...++++++||+|+|.+++ -|++||+.++. ++.+ ++.+.++++..++.++.+...|.
T Consensus 382 g~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ig 451 (559)
T COG4988 382 GIDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDAS----DEEIIAALDQAGLLEFVPKPDGLDTVIG 451 (559)
T ss_pred CccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCC----HHHHHHHHHHhcHHHhhcCCCcccchhc
Confidence 98754 4568899999999998876 59999999862 1222 34578899999998877653333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+|+.+|||||+|||++||||+.+++++++||||++||.+++++|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 452 e~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 452 EGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred cCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 25578999999999999999999999999999999999999999999999976 599999999985 567789999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 6 588888874
No 242
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-36 Score=330.07 Aligned_cols=214 Identities=22% Similarity=0.315 Sum_probs=179.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ ++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 67788887764 2359999999999999999999999999999999999875 46899999998642
Q ss_pred ---------cccccceEEEEccCCCCCCCCCHHHHHHHHH-hhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCC
Q 001293 936 ---------QETFARISGYCEQNDIHSPFVTIYESLLFSA-WLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1106)
Q Consensus 936 ---------~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~-~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~ 1005 (1106)
....++.++|++|++.+++.+|+.||+.+.. ... ..........+.++++.+++.+..+.. +
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~ 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRF-----P 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----h
Confidence 1123567999999999888899999997532 121 122333345678899999998776665 3
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
..||||||||++|||||+.+|++++|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999998777999999999987 57788999999986 6
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (242)
T PRK11124 218 HIVEQGDAS 226 (242)
T ss_pred EEEEeCCHH
Confidence 888988864
No 243
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-36 Score=336.04 Aligned_cols=215 Identities=25% Similarity=0.363 Sum_probs=180.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|++++|+. ...+|+|+||++++||++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 677888887741 1348999999999999999999999999999999999866 56899999998764
Q ss_pred c---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 Q---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ..+++.+||++|++. .+...||.||+.+..... ..+.+...+.++++++.++|.+..+.. +..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRV-----PHHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCCHH
Confidence 3 234567899999974 334579999998765322 233444456688999999998877765 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||++|||||+.+|++|||||||+|||+.++..+++.++++.++ |+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999998765 899999999987 57789999999987 588898
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 220 g~~~ 223 (277)
T PRK13652 220 GTVE 223 (277)
T ss_pred CCHH
Confidence 8754
No 244
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-36 Score=325.22 Aligned_cols=231 Identities=25% Similarity=0.339 Sum_probs=188.1
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-C-CCCceeEEEEcCccCCCCcc-------cceEEEEcCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-P-TLKVSGTVTYNGHDMDEFVP-------QRTAAYISQH 234 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1106)
...+++||||.+++||+++|+|.|||||||+.++|.|+++ + ...++|+|.++|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4669999999999999999999999999999999999998 4 33567999999998755442 2579999998
Q ss_pred C--CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 001293 235 D--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1106)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1106)
+ .+.|.+||.+.+.-..+.+.... ..++....+.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 5 68899999999876654332100 0112234567789999998643
Q ss_pred ccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhc
Q 001293 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1106)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1106)
. +-+.++.+|||||||||.||.||+.+|++||.|||||+||...+.+|++.|+++.+ ..++.++.|+|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 2 33567889999999999999999999999999999999999999999999999876 56778888999999999999
Q ss_pred CeEEEEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhhc
Q 001293 393 DDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVT 437 (1106)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v~ 437 (1106)
|+|+||+.|+||+.|+.+++. ..|.+.-....+..+.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~--------~~P~HPYT~~Ll~s~P 258 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF--------KNPKHPYTRGLLNSLP 258 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh--------cCCCChHHHHHHHhCc
Confidence 999999999999999999874 4455544444444443
No 245
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=336.32 Aligned_cols=206 Identities=25% Similarity=0.346 Sum_probs=170.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC--C---cccceEEEEcCCCC-CCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--F---VPQRTAAYISQHDN-HIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~~ 239 (1106)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .++
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 4999999999999999999999999999999999999998 9999999998741 1 12367999999863 345
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
..||+||+.++....+... .+....++++++.+||.+..++.
T Consensus 97 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~---- 138 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKP---- 138 (283)
T ss_pred cccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCC----
Confidence 6899999998654322100 00112356788999998766654
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
++.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+..++.++||++++|+
T Consensus 139 -~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 139 -THCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELG-LTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEEE
Confidence 456999999999999999999999999999999999999999999998865334 455557888888999999999999
Q ss_pred CCeEEEEcChHHHHH
Q 001293 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988754
No 246
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=332.39 Aligned_cols=214 Identities=25% Similarity=0.352 Sum_probs=178.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ +..+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56788887764 2469999999999999999999999999999999999865 46899999998653
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
. ..+++.++|++|++.+++.+||+||+.+...... ...+..+..++++++.+++.+..+.. +..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRD-----YPQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHH
Confidence 2 2344679999999888788999999987542211 11223345678899999998776665 35799999
Q ss_pred HHHHHHHHHHh------cCCCeEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1013 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1013 rqrl~iA~aL~------~~p~illLDEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
|||++||+||+ .+|++|+|||||+|||+.++..+++.|+++. ++|+|||++||+++ ++.+.||++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 67899999999987 57789999999986 5
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (258)
T PRK13548 218 RLVADGTPA 226 (258)
T ss_pred EEEeeCCHH
Confidence 888888753
No 247
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.2e-36 Score=373.72 Aligned_cols=253 Identities=19% Similarity=0.240 Sum_probs=193.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++.....+|+.++++.+++.. +....+....+++|+|+++.++.
T Consensus 308 ~~~~~~s~~ri~~~l~~~~~~~--------~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 352 (592)
T PRK10790 308 LQQAVVAGERVFELMDGPRQQY--------GNDDRPLQSGRIDIDNVSFAYRD--------------------------- 352 (592)
T ss_pred HHHHHHHHHHHHHHhcCCCccC--------CCCccCCCCCeEEEEEEEEEeCC---------------------------
Confidence 4567777888887776543310 00011112346999999998731
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
+ .++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++..+ ++.++||+|+
T Consensus 353 ---~---~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~ 423 (592)
T PRK10790 353 ---D---NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQD 423 (592)
T ss_pred ---C---CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 24999999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.+|+ .|++|||.++.. ...+.+.++++. .++ ++.++ .|++..||
T Consensus 424 ~~lF~-~Ti~~NI~~~~~-----~~d~~i~~a~~~---~gl------------------------~~~i~--~lp~Gldt 468 (592)
T PRK10790 424 PVVLA-DTFLANVTLGRD-----ISEEQVWQALET---VQL------------------------AELAR--SLPDGLYT 468 (592)
T ss_pred Ccccc-chHHHHHHhCCC-----CCHHHHHHHHHH---cCc------------------------HHHHH--hccccccc
Confidence 87666 599999998631 111222222211 111 11122 26778899
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+. .||||||||++|||||+.+|+|++||||||+||+.++..|.+.|+++. .++|+|+..|++ +....||+
T Consensus 469 ~i~e~g~-~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIivtHr~--~~l~~~D~ 543 (592)
T PRK10790 469 PLGEQGN-NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVIAHRL--STIVEADT 543 (592)
T ss_pred cccCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--HHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999999998864 345666644433 66778999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+++..|+++++.+
T Consensus 544 ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 544 ILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred EEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999864
No 248
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.9e-37 Score=385.66 Aligned_cols=261 Identities=23% Similarity=0.284 Sum_probs=195.6
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCC-CCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI-DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1106)
.++.+..++|+.++++.++|.-......+...... +.....++|+|+++.++.
T Consensus 436 ~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~-------------------------- 489 (710)
T TIGR03796 436 LQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSP-------------------------- 489 (710)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCC--------------------------
Confidence 56778888999888876655200000000000000 112357999999999842
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcC
Q 001293 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1106)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1106)
..+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|
T Consensus 490 ------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q 560 (710)
T TIGR03796 490 ------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQ 560 (710)
T ss_pred ------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEec
Confidence 1134999999999999999999999999999999999999998 9999999999877653 578999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 001293 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1106)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
++.+| +.|++|||.++. +....+.+.++++. .++ ++. ...++...|
T Consensus 561 ~~~lf-~gTi~eNi~l~~----~~~~~~~i~~al~~---~~l------------------------~~~--i~~lp~gl~ 606 (710)
T TIGR03796 561 DIFLF-EGTVRDNLTLWD----PTIPDADLVRACKD---AAI------------------------HDV--ITSRPGGYD 606 (710)
T ss_pred CChhh-hccHHHHhhCCC----CCCCHHHHHHHHHH---hCC------------------------HHH--HHhCcCccc
Confidence 87555 679999998752 11112222222211 111 111 124677889
Q ss_pred cccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001293 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1106)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1106)
|.+|+.+ .+||||||||++||||++++|++|+||||||+||+.++..|.+.|++ .++|+|+ ++|.. ++...||
T Consensus 607 t~i~e~G-~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D 679 (710)
T TIGR03796 607 AELAEGG-ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCD 679 (710)
T ss_pred ceeccCC-CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCC
Confidence 9999876 47999999999999999999999999999999999999999999975 3456555 45443 5667799
Q ss_pred eEEEEcCCeEEEEcChHHHHH
Q 001293 394 DIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1106)
+|++|++|+++++|+++++++
T Consensus 680 ~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 680 EIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred EEEEEeCCEEEEecCHHHHHH
Confidence 999999999999999999865
No 249
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-37 Score=324.96 Aligned_cols=222 Identities=26% Similarity=0.357 Sum_probs=192.5
Q ss_pred cceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCCC
Q 001293 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1106)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1106)
...-++|+|+.|+.||+..|||-||||||||+++|.++.+|+ +|+|+++|.++...+. ++.++.|+|+..
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345789999999999999999999999999999999999999 9999999999866543 367999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1106)
++|..||.||..|+...+|.+.. +.+.++.+.|+..||....+.+
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~y- 161 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKY- 161 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcC-
Confidence 99999999999999999886431 1233567789999999988855
Q ss_pred ccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
+.+||||+||||.|||||+.+|+|||||||+|+|||--+.++.+.|.++-...++| |+.++|+.+|++++.|||.
T Consensus 162 ----p~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KT-IvFitHDLdEAlriG~rIa 236 (386)
T COG4175 162 ----PNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKT-IVFITHDLDEALRIGDRIA 236 (386)
T ss_pred ----cccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCe-EEEEecCHHHHHhccceEE
Confidence 45799999999999999999999999999999999999999998887776544444 5568999999999999999
Q ss_pred EEcCCeEEEEcChHHHHHHHHhCCCCCCCCCChhHHHHhh
Q 001293 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEV 436 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~~G~~~p~~~~~ad~l~~v 436 (1106)
+|.+|+|+..|+++|++. .|...-+++|...+
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999964 46655666776654
No 250
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-36 Score=329.90 Aligned_cols=217 Identities=24% Similarity=0.278 Sum_probs=178.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcCc
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1106)
+.++|+++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887764 236999999999999999999999999999999999976421 36899999998
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccc----cccccCCCCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL----RQSLVGLPGV 1005 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~----~~~~~g~~g~ 1005 (1106)
++.. ..+++.+||++|++.+++.+||.||+.+....+... ....+..+.++++++.+++.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLV-KSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhcccc-CCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7642 235567999999998888899999998865332111 1223344567889999998542 2332 4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
.+||||||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.||++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999864 899999999987 57788999999986 6
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 222 ~i~~~g~~~ 230 (250)
T PRK14247 222 QIVEWGPTR 230 (250)
T ss_pred eEEEECCHH
Confidence 888888753
No 251
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-36 Score=340.50 Aligned_cols=214 Identities=21% Similarity=0.236 Sum_probs=173.0
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCccCCCCcc-------cceEEEEcCCC-
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD- 235 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1106)
.++|+||||+|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 469999999999999999999999999999999999997421 128999999998765432 13699999987
Q ss_pred -CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 236 -NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
.+.+.+||.+++....+...... ..+....++++|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 47899999999877654321000 0011234677899999974221
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
+-++.+.+|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++... .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 113456679999999999999999999999999999999999999999999998653 345666688999999999999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999998753
No 252
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.2e-36 Score=345.80 Aligned_cols=208 Identities=25% Similarity=0.294 Sum_probs=175.5
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCc----cCCCCcc-------cceEEEE
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH----DMDEFVP-------QRTAAYI 231 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 231 (1106)
....+|+|+|++|++||+++|+||||||||||+++|+|+++|+ +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3333211 2479999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 001293 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1106)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1106)
+|++.+++.+||+||+.|+....+... .+.+..++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865433210 0112245678999999877
Q ss_pred cccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001293 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1106)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1106)
.|..+ ..|||||||||+|||||+.+|+||||||||+|||+.++.++.+.|+++.... +.+|+.++|+..++.++
T Consensus 158 ~~~~~-----~~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~-~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKP-----GELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKL-NKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHh
Confidence 77655 4699999999999999999999999999999999999999999999876533 45555678889999999
Q ss_pred cCeEEEEcCCeEEEEcChHHHH
Q 001293 392 FDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~ 413 (1106)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998874
No 253
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=5.5e-36 Score=325.55 Aligned_cols=201 Identities=27% Similarity=0.346 Sum_probs=162.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCC--CC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--NH 237 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999998 999999999876533 235799999987 46
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1106)
++.+||+||+.+.....+.....+ ......+.+++.+||. ...+..
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKKE--------------------------------ARKEAVLLLLVGVGLPEEVLNRY- 142 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHHH--------------------------------HHHHHHHHHHHHCCCChhHhhCC-
Confidence 678999999988654322110000 0001124567888885 444544
Q ss_pred ccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
+..|||||||||+|||+|+.+|++|||||||+|||+.++..+.+.|++++...+ ++||.++|+..++.+++|+|+
T Consensus 143 ----~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 143 ----PHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELG-LTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEE
Confidence 456999999999999999999999999999999999999999999998765324 455557778888888999999
Q ss_pred EEcCCeEEEEc
Q 001293 397 LLSDGQIVYQG 407 (1106)
Q Consensus 397 lL~~G~iv~~G 407 (1106)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 254
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.6e-36 Score=328.46 Aligned_cols=216 Identities=25% Similarity=0.314 Sum_probs=178.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56788877663 2469999999999999999999999999999999999865 46899999998754
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCC--C---CCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P---EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 936 ~~----~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~--~---~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
.. ..++.++|++|++.+++.+|++||+.+....... . ....+..+..++++++.+++.+..+.. +.
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 31 1234699999999999999999999886431100 0 011223345688999999998776654 45
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
.||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999865 799999999987 57788999999986 58
Q ss_pred EEEecCCC
Q 001293 1087 EIYVGPLG 1094 (1106)
Q Consensus 1087 ~~~~g~~g 1094 (1106)
+++.|+..
T Consensus 220 ~~~~~~~~ 227 (242)
T TIGR03411 220 VLAEGSLD 227 (242)
T ss_pred EEeeCCHH
Confidence 88888754
No 255
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-36 Score=330.79 Aligned_cols=218 Identities=24% Similarity=0.263 Sum_probs=178.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1106)
.++++|+++.++ +..+|+|+||+|++||++||+|+||||||||+++|+|...+. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 367889988774 235999999999999999999999999999999999986532 3589999999
Q ss_pred ccCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++. ...+++.++|++|++.+++.+|+.||+.++...+... ...+...+.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 146 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLV-KSKKELDERVEWALKKAALWDEVKDRLNDY--- 146 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCcc-CCHHHHHHHHHHHHHHcCCccchhhhhccC---
Confidence 8763 1234567999999998888899999998865432111 122333456788999998853 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 222 (253)
T PRK14267 147 --PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 799999999987 5788899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |++++.|+..
T Consensus 223 ~-G~i~~~~~~~ 233 (253)
T PRK14267 223 L-GKLIEVGPTR 233 (253)
T ss_pred C-CEEEEeCCHH
Confidence 6 5898988854
No 256
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=7.7e-37 Score=384.79 Aligned_cols=257 Identities=24% Similarity=0.309 Sum_probs=195.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++.+..++|+.++++.++|. .+.......+....+++|+|+++.++.
T Consensus 438 ~~~~~~~~~ri~~~l~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~y~~--------------------------- 485 (708)
T TIGR01193 438 LQAARVANNRLNEVYLVDSEF-----INKKKRTELNNLNGDIVINDVSYSYGY--------------------------- 485 (708)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cccccccCCCCCCCcEEEEEEEEEcCC---------------------------
Confidence 567778888888887766551 100000111222347999999999731
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
.+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|+
T Consensus 486 ------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 556 (708)
T TIGR01193 486 ------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQE 556 (708)
T ss_pred ------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecC
Confidence 124999999999999999999999999999999999999998 9999999999876654 4789999998
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.+| +.||+|||.++.+ +....+.+.++++.. + .++. +..++...||
T Consensus 557 ~~lf-~gTI~eNi~l~~~---~~~~~~~i~~a~~~a---~------------------------l~~~--i~~lp~gldt 603 (708)
T TIGR01193 557 PYIF-SGSILENLLLGAK---ENVSQDEIWAACEIA---E------------------------IKDD--IENMPLGYQT 603 (708)
T ss_pred ceeh-hHHHHHHHhccCC---CCCCHHHHHHHHHHh---C------------------------CHHH--HHhcccccCc
Confidence 7555 5699999998631 111122222222211 1 1111 1247788899
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.||+.+ .+||||||||++||||++++|++|+||||||+||+.++..+.+.|++. .++|+|+ ++|.. ++.+.||+
T Consensus 604 ~i~e~G-~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~-~~~~~~D~ 677 (708)
T TIGR01193 604 ELSEEG-SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRL-SVAKQSDK 677 (708)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-Eecch-HHHHcCCE
Confidence 999865 479999999999999999999999999999999999999999999863 3456555 45543 56788999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|++++.|+++++++
T Consensus 678 i~~l~~G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 678 IIVLDHGKIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999865
No 257
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-36 Score=323.34 Aligned_cols=194 Identities=25% Similarity=0.345 Sum_probs=163.8
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc-cccceEEEEccCCCCCCCCCHHHHHHH
Q 001293 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYESLLF 964 (1106)
Q Consensus 886 ~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~~tv~e~l~~ 964 (1106)
|+||++++|++++|+||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999875 4689999999876431 234679999999988888999999987
Q ss_pred HHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHH
Q 001293 965 SAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1044 (1106)
Q Consensus 965 ~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~ 1044 (1106)
....+. .. .+..++.++++++.+++.+..+.. +..||+|||||++|||||+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRL-----PGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 542211 11 123345678999999998777665 3579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1045 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1045 ~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
.+++.|+++.+ .|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999875 4899999999987 57788999999986 5776654
No 258
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5.4e-36 Score=328.83 Aligned_cols=219 Identities=23% Similarity=0.254 Sum_probs=175.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.|+ +..+|+|+||+|++|++++|+|+||||||||+++|+|.....+..|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35678877764 24699999999999999999999999999999999997411256899999998754
Q ss_pred cc---cc-cceEEEEccCCCCCCCCCHHHHHHHHHhhcCC--C--CCChHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 001293 936 QE---TF-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P--EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1106)
Q Consensus 936 ~~---~~-~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~--~--~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~ 1006 (1106)
.. .. +..++|++|++.+++.+|++|++.+....... . ..+.+...+.+.++++.+++. ++.+..+. .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 22 23489999999999999999999876432211 0 112233345678899999996 34454321 2
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHh-cCeEEEEecCC
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGG 1085 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~Gg 1085 (1106)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+... ||++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877899999999987 46666 799999986 6
Q ss_pred EEEEecCC
Q 001293 1086 QEIYVGPL 1093 (1106)
Q Consensus 1086 ~~~~~g~~ 1093 (1106)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 88888875
No 259
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=316.06 Aligned_cols=207 Identities=27% Similarity=0.375 Sum_probs=179.9
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc----cccceEEEEccCCCCCC
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDIHSP 954 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~~~~ 954 (1106)
+...+++||||++++||++||+||||||||||+|+|+|... +..|.|.++|.++... ..++.++.-+|...+++
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 56789999999999999999999999999999999999776 5689999999987543 23456888999999999
Q ss_pred CCCHHHHHHHHHhhcC--------CC-CCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcC
Q 001293 955 FVTIYESLLFSAWLRL--------SP-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVAN 1025 (1106)
Q Consensus 955 ~~tv~e~l~~~~~~r~--------~~-~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~ 1025 (1106)
.+||.||++.+...+. +. ....++..+.+.++|+.++|.+.++...+ +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998755331 11 01234556678889999999999998854 6999999999999999999
Q ss_pred CCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1026 PSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1026 p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
|++|+||||.+||.+.....+.+.|+++.+ .|.||+++.||++. ++.+||||+||+. |+++..|+.-
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 999999999999999999999999999987 46999999999985 9999999999986 5899999864
No 260
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=312.47 Aligned_cols=203 Identities=24% Similarity=0.387 Sum_probs=184.0
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCCCCCCH
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 958 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv 958 (1106)
+++.+++||||.++||++.|++|+|||||||++++|.|... +.+|.|.++|.+..+. ...++||+|.+.-+++.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCccCcH
Confidence 46789999999999999999999999999999999999887 5799999999988654 34569999999999999999
Q ss_pred HHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001293 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1106)
Q Consensus 959 ~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgL 1038 (1106)
.|.|.|.+.+.. ++.++....+...|+.+++....... +..||-|++|++.+-.+++.+|+++|||||+|||
T Consensus 90 ~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 999999998864 55666777789999999998877766 4679999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
||-+.+.+.+.+.++.+.|.|||+++|+++ .+.++||++++|++ |+.|..|++-
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 999999999999999999999999999998 69999999999986 5777888863
No 261
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-36 Score=329.70 Aligned_cols=200 Identities=26% Similarity=0.380 Sum_probs=166.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... .+.++|++|++.+++.+||+|
T Consensus 15 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 15 PALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHH
Confidence 4999999999999999999999999999999999999998 99999999887542 346899999988888899999
Q ss_pred HHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCC
Q 001293 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1106)
|+.++....+... .+....++.+++.+||++..++.+ ..||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS 130 (255)
T PRK11248 90 NVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQLS 130 (255)
T ss_pred HHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhCC
Confidence 9988653322100 001123567889999987666544 4699
Q ss_pred hhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc--CCeE
Q 001293 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQI 403 (1106)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~i 403 (1106)
|||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.... +++||.++|+..++.++||+|++|+ +|++
T Consensus 131 gGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~i 209 (255)
T PRK11248 131 GGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGRV 209 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcEE
Confidence 999999999999999999999999999999999999999999875433 4455557888889999999999998 5999
Q ss_pred EEEcChH
Q 001293 404 VYQGPRE 410 (1106)
Q Consensus 404 v~~G~~~ 410 (1106)
+..++.+
T Consensus 210 ~~~~~~~ 216 (255)
T PRK11248 210 VERLPLN 216 (255)
T ss_pred EEEecCC
Confidence 9988654
No 262
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.4e-37 Score=404.26 Aligned_cols=263 Identities=22% Similarity=0.293 Sum_probs=198.7
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCC-----CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHH
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGID-----LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDIL 152 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 152 (1106)
.+.+++..+|+.++++..++ +..+ +.-+.+ ....+|+|+||+|.|+.
T Consensus 1126 ~~~a~~a~~ri~~ll~~~~~-----~~~~-~~~~~~~~~~~~~~g~I~f~nVsF~Y~~---------------------- 1177 (1466)
T PTZ00265 1126 SENAKLSFEKYYPLIIRKSN-----IDVR-DNGGIRIKNKNDIKGKIEIMDVNFRYIS---------------------- 1177 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCCc-----CCCC-CCcccccccCCCCCceEEEEEEEEECCC----------------------
Confidence 46777888888888876432 1000 001111 12357999999999842
Q ss_pred HHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---------------------------
Q 001293 153 NYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--------------------------- 205 (1106)
Q Consensus 153 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------- 205 (1106)
+ .+.+||+|+|++|+||+.+||+||||||||||+++|+|+++|+
T Consensus 1178 --------~-~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 (1466)
T PTZ00265 1178 --------R-PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQ 1248 (1466)
T ss_pred --------C-CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence 1 1235999999999999999999999999999999999999981
Q ss_pred ------------------------CCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCc
Q 001293 206 ------------------------LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 258 (1106)
Q Consensus 206 ------------------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~ 258 (1106)
...+|+|++||+++.+... ++.++||+|++.+| +.||+|||.|+.. ..
T Consensus 1249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~----~a 1323 (1466)
T PTZ00265 1249 NVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE----DA 1323 (1466)
T ss_pred ccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC----CC
Confidence 0138999999999887654 57899999987555 6899999999731 12
Q ss_pred hhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHH
Q 001293 259 RYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMM 338 (1106)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al 338 (1106)
..+.+.++++... + ++. +..|++.+||.||+.+. .||||||||++|||||
T Consensus 1324 t~eeI~~A~k~A~---l------------------------~~f--I~~LP~GydT~VGe~G~-~LSGGQkQRIaIARAL 1373 (1466)
T PTZ00265 1324 TREDVKRACKFAA---I------------------------DEF--IESLPNKYDTNVGPYGK-SLSGGQKQRIAIARAL 1373 (1466)
T ss_pred CHHHHHHHHHHcC---C------------------------HHH--HHhCccccCCccCCCCC-cCCHHHHHHHHHHHHH
Confidence 2233333333221 1 111 23589999999998765 5999999999999999
Q ss_pred hcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC----CeEE-EEcChHHHH
Q 001293 339 VGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD----GQIV-YQGPRELVL 413 (1106)
Q Consensus 339 ~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~----G~iv-~~G~~~~~~ 413 (1106)
+++|+||+||||||+||+.++..|.+.|+++....++|+|+ +.|. .++.+.||+|++|++ |+++ ++|++++++
T Consensus 1374 lr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIi-IaHR-lsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl 1451 (1466)
T PTZ00265 1374 LREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIIT-IAHR-IASIKRSDKIVVFNNPDRTGSFVQAHGTHEELL 1451 (1466)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEE-Eech-HHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHH
Confidence 99999999999999999999999999998864223456555 4444 467788999999999 9955 899999986
Q ss_pred H
Q 001293 414 E 414 (1106)
Q Consensus 414 ~ 414 (1106)
+
T Consensus 1452 ~ 1452 (1466)
T PTZ00265 1452 S 1452 (1466)
T ss_pred h
Confidence 4
No 263
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-36 Score=330.39 Aligned_cols=216 Identities=21% Similarity=0.238 Sum_probs=176.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1106)
.+.++|+++.++ +..+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 588999988774 135899999999999999999999999999999999976531 2489999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc----cccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~----~~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++ +||+||+.+....... ......++.+.++++.+++. +..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234667999999987774 8999999987533211 12233445678889988873 223332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999986 4799999999987 5778899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |+++..|+..
T Consensus 224 ~-G~i~~~g~~~ 234 (254)
T PRK14273 224 N-GCIEEESSTD 234 (254)
T ss_pred C-CEEEEeCCHH
Confidence 6 6888888753
No 264
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.2e-36 Score=375.50 Aligned_cols=257 Identities=22% Similarity=0.371 Sum_probs=192.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.+..+...+|+.++.+.+++. ..+....+.+..+|+++||++.++.
T Consensus 308 ~~~~~~~~~ri~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 353 (582)
T PRK11176 308 FQRGMAACQTLFAILDLEQEK-------DEGKRVIERAKGDIEFRNVTFTYPG--------------------------- 353 (582)
T ss_pred HHHHHHHHHHHHHHhcCCCcC-------CCCCcCCCCCCCeEEEEEEEEecCC---------------------------
Confidence 345566667776666544320 0001111222346999999998742
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
..+++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 354 -----~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 425 (582)
T PRK11176 354 -----KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQN 425 (582)
T ss_pred -----CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccC
Confidence 1234999999999999999999999999999999999999998 9999999999877653 4789999998
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.+| +.|++|||.++.. .....+.+.++++. .+ .+..+ -.|++..||
T Consensus 426 ~~lf-~~Ti~~Ni~~~~~---~~~~~~~i~~al~~---~~------------------------l~~~i--~~lp~Gldt 472 (582)
T PRK11176 426 VHLF-NDTIANNIAYART---EQYSREQIEEAARM---AY------------------------AMDFI--NKMDNGLDT 472 (582)
T ss_pred ceee-cchHHHHHhcCCC---CCCCHHHHHHHHHH---hC------------------------cHHHH--HhcccccCc
Confidence 7665 5799999987531 00111222222111 10 11112 236788899
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+ +.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. .++|+|+ ++|.. +..+.||+
T Consensus 473 ~ig~~g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~-VtHr~-~~~~~~D~ 547 (582)
T PRK11176 473 VIGENG-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLV-IAHRL-STIEKADE 547 (582)
T ss_pred eeCCCC-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCE
Confidence 999875 4699999999999999999999999999999999999999999998753 3455555 44443 67788999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+++++|+++++.+
T Consensus 548 Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 548 ILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred EEEEECCEEEEeCCHHHHHh
Confidence 99999999999999998864
No 265
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-36 Score=338.97 Aligned_cols=208 Identities=20% Similarity=0.233 Sum_probs=174.4
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCC--C
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 236 (1106)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999987 999999999876543 235799999987 5
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1106)
+.+.+||.+++.+..+......+ .+....+.++++.+||+. .+++
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLSA---------------------------------AERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCCH---------------------------------HHHHHHHHHHHHHCCCChHHhcC-
Confidence 88999999999876543210000 011234677899999963 4554
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
.+..|||||||||+||+||+.+|++||+||||++||..++.+|++.|+++... .+++++.++|+...+.+++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQE-LGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhCCEE
Confidence 45579999999999999999999999999999999999999999999987653 3556667899999999999999
Q ss_pred EEEcCCeEEEEcChHHHHH
Q 001293 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999998753
No 266
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-36 Score=305.85 Aligned_cols=215 Identities=27% Similarity=0.393 Sum_probs=182.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
|..+|++|++. .+.+|++||++++|||++||+|||||||||||++|+|... +..|.+.++|.+..
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 45678888863 4579999999999999999999999999999999999776 56899999999876
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
+ ..+++..+..||+..+....||+|-+.++..-..... ...+..+.++++|+.+++.++..+. ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~g~-~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRSGR-EPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcccccccCC-CchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 5 3467788999999988777899999999854321111 1112334578899999999988765 35799999
Q ss_pred HHHHHHHHHHhcC------CCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1013 RKRLTIAVELVAN------PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1013 rqrl~iA~aL~~~------p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
||||.+||.|++- +++||||||||.||...+..++++.+++++.|..|+++-||++. ...+||+|++|++ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 9999999999873 46899999999999999999999999999999999999999985 7889999999986 69
Q ss_pred EEEecCC
Q 001293 1087 EIYVGPL 1093 (1106)
Q Consensus 1087 ~~~~g~~ 1093 (1106)
++..|+.
T Consensus 219 v~a~g~p 225 (259)
T COG4559 219 VIASGSP 225 (259)
T ss_pred EeecCCH
Confidence 9998875
No 267
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.7e-36 Score=326.49 Aligned_cols=201 Identities=26% Similarity=0.352 Sum_probs=165.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 14 HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 5999999999999999999999999999999999999998 9999999988754332 35699999999899999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcC-Ccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDEM 320 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~~ 320 (1106)
||+||+.++....+.. . ....+.+++.++ +.+..++ .
T Consensus 91 tv~~~l~~~~~~~~~~-~------------------------------------~~~~~~~l~~~~~l~~~~~~-----~ 128 (230)
T TIGR03410 91 TVEENLLTGLAALPRR-S------------------------------------RKIPDEIYELFPVLKEMLGR-----R 128 (230)
T ss_pred cHHHHHHHHHHhcCcc-h------------------------------------HHHHHHHHHHHHhHHHHhhC-----C
Confidence 9999999875432110 0 001234455555 4444444 3
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.+++|+|++|++
T Consensus 129 ~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~ 207 (230)
T TIGR03410 129 GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAE-GGMAILLVEQYLDFARELADRYYVMER 207 (230)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHc-CCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4569999999999999999999999999999999999999999999987642 344555577888899999999999999
Q ss_pred CeEEEEcChHHH
Q 001293 401 GQIVYQGPRELV 412 (1106)
Q Consensus 401 G~iv~~G~~~~~ 412 (1106)
|++++.|+.+++
T Consensus 208 g~i~~~~~~~~~ 219 (230)
T TIGR03410 208 GRVVASGAGDEL 219 (230)
T ss_pred CEEEEECCHHHc
Confidence 999999998876
No 268
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-36 Score=331.65 Aligned_cols=217 Identities=25% Similarity=0.336 Sum_probs=179.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ +..+|+|+||++++|++++|+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56788877663 2469999999999999999999999999999999999765 46899999998653
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcC-CCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRL-SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~-~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ..+++.++|++|++.+++.+|+.||+.++..... ......+.....++++++.+++.+..+.. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 2345679999999888888899999987531100 00111122345678899999998776665 4579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777999999999997 58889999999986 5888888
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 754
No 269
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=335.36 Aligned_cols=215 Identities=26% Similarity=0.309 Sum_probs=180.2
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++||++.|+. ..+.+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECC
Confidence 778899877741 12359999999999999999999999999999999999876 46899999998764
Q ss_pred c---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 Q---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ...++.+||++|++. .++..||.||+.+..... ..+.++..+.+.++++.++|.+..+.. +..||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNRE-----PHRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCC-----cccCCHH
Confidence 3 234567999999974 566789999998865332 123344456688999999998877766 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++ +.||++++|++ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999865 899999999986 35 46999999986 588899
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 222 g~~~ 225 (279)
T PRK13635 222 GTPE 225 (279)
T ss_pred CCHH
Confidence 8854
No 270
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-36 Score=330.06 Aligned_cols=215 Identities=24% Similarity=0.284 Sum_probs=176.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 931 (1106)
.++++|+++.|+ ++.+|+|+||+|++|+++||+|+||||||||+++|+|...+ .+..|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 488899987763 23599999999999999999999999999999999997652 13589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++ .|++||+.|....+. ...+..++.++++++.+++.+ ..+..
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHG---ANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 234567999999988777 899999998653321 223334456788999998842 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.+ |+|||++||+++ ++.+.||++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999864 899999999987 5778899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |++++.|+..
T Consensus 228 ~-G~i~~~~~~~ 238 (258)
T PRK14268 228 M-GELIEFGQTR 238 (258)
T ss_pred C-CEEEEeCCHH
Confidence 6 6899988753
No 271
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-36 Score=330.32 Aligned_cols=194 Identities=22% Similarity=0.316 Sum_probs=164.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 4999999999999999999999999999999999999998 9999999977543 2467999999988888899999
Q ss_pred HHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCC
Q 001293 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1106)
|+.++.. . . . ...++.+++.+||.+..+.. +..||
T Consensus 101 nl~~~~~--~---~------~-----------------------------~~~~~~~l~~~gl~~~~~~~-----~~~LS 135 (257)
T PRK11247 101 NVGLGLK--G---Q------W-----------------------------RDAALQALAAVGLADRANEW-----PAALS 135 (257)
T ss_pred HHHhccc--c---h------H-----------------------------HHHHHHHHHHcCChhHhcCC-----hhhCC
Confidence 9987521 0 0 0 01245678889998766554 45699
Q ss_pred hhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001293 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1106)
|||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++....+ .+|+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~-~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHG-FTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999999999999999999999999998765334 445557888888899999999999999999
Q ss_pred EcChH
Q 001293 406 QGPRE 410 (1106)
Q Consensus 406 ~G~~~ 410 (1106)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88764
No 272
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-36 Score=333.28 Aligned_cols=218 Identities=21% Similarity=0.274 Sum_probs=181.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|++++|+ +..+|+|+||++++|++++|+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 578899988874 2469999999999999999999999999999999999865 4689999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCC-CCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..+++.++|++|++.+++..|++||+.+....... .....+.....++++++.+++.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 23445799999999888889999999875311100 0001123345678899999998776665 467999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||+++|++. ++.+.||++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 58899999999986 58888
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 88754
No 273
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-36 Score=329.85 Aligned_cols=218 Identities=19% Similarity=0.242 Sum_probs=178.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1106)
.+.++|+++.|+ +..+|+|+||+|++|+++||+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367889988774 236999999999999999999999999999999999976532 2589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++.+|++||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999988888999999988654322 1123344556788999998842 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+.+||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK-QDYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 46799999999999999999999999999999999999999999999986 4699999999987 5788999999997
Q ss_pred c-----CCEEEEecCCC
Q 001293 1083 R-----GGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~-----Gg~~~~~g~~g 1094 (1106)
+ .|++++.|+..
T Consensus 222 ~~~~~~~g~i~~~~~~~ 238 (258)
T PRK14241 222 LEATGKPGRLVEIDDTE 238 (258)
T ss_pred cccCCCCceEEecCCHH
Confidence 3 47999998853
No 274
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.3e-36 Score=381.23 Aligned_cols=255 Identities=22% Similarity=0.339 Sum_probs=190.1
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCC-CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGID-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1106)
.++.....+|+.+.++.+++. .+ .....+ .....|+|+||++.++.
T Consensus 444 ~~~~~~a~~ri~~~l~~~~~~-----~~--~~~~~~~~~~~~I~~~nVsf~Y~~-------------------------- 490 (711)
T TIGR00958 444 MMQAVGASEKVFEYLDRKPNI-----PL--TGTLAPLNLEGLIEFQDVSFSYPN-------------------------- 490 (711)
T ss_pred HHHHHHHHHHHHHHhCCCCCC-----CC--CCCCCCCCCCCeEEEEEEEEECCC--------------------------
Confidence 456777778888777655431 00 000011 12346999999999842
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcC
Q 001293 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1106)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1106)
+ +++++|+|+|++|+|||.++|+||||||||||+++|+|+++|+ +|+|++||+++++... ++.++||+|
T Consensus 491 ----~-~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q 562 (711)
T TIGR00958 491 ----R-PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQ 562 (711)
T ss_pred ----C-CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEec
Confidence 1 1235999999999999999999999999999999999999998 9999999999877653 478999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 001293 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1106)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
++.+| +.|++|||.++.. ....+.+.++++. +++ ++.++ .|++..|
T Consensus 563 ~~~lF-~gTIreNI~~g~~----~~~~e~i~~al~~---a~l------------------------~~~i~--~lp~Gld 608 (711)
T TIGR00958 563 EPVLF-SGSVRENIAYGLT----DTPDEEIMAAAKA---ANA------------------------HDFIM--EFPNGYD 608 (711)
T ss_pred Ccccc-ccCHHHHHhcCCC----CCCHHHHHHHHHH---cCC------------------------HHHHH--hCCCccC
Confidence 87555 5799999998642 1111222222111 111 11122 3677889
Q ss_pred cccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001293 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1106)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1106)
|.+|+.+ ..||||||||++||||++++|+|++||||||+||+.++..|.+ ... ..++|+|+ ++|.. ++.+.+|
T Consensus 609 T~ige~G-~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl-~~i~~aD 681 (711)
T TIGR00958 609 TEVGEKG-SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRL-STVERAD 681 (711)
T ss_pred CcccCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccH-HHHHhCC
Confidence 9999865 4699999999999999999999999999999999999999888 221 23455555 55554 5678899
Q ss_pred eEEEEcCCeEEEEcChHHHHH
Q 001293 394 DIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1106)
+|++|++|+|+++|+++++.+
T Consensus 682 ~IivL~~G~ive~Gt~~eL~~ 702 (711)
T TIGR00958 682 QILVLKKGSVVEMGTHKQLME 702 (711)
T ss_pred EEEEEECCEEEEeeCHHHHHh
Confidence 999999999999999999865
No 275
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.5e-35 Score=366.08 Aligned_cols=209 Identities=29% Similarity=0.393 Sum_probs=177.8
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
..++|+||+|+|+. .+.++|+|+|++|+|||++||+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 47999999999852 12469999999999999999999999999999999999876 568999999998
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccc-------cccCCC
Q 001293 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-------SLVGLP 1003 (1106)
Q Consensus 934 ~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~g~~ 1003 (1106)
+++ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++.+++.+..+ ..+|.
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~-----~-~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige- 584 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA-----P-LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISE- 584 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC-----C-CC----HHHHHHHHHHcCcHHHHHhccccccccccC-
Confidence 754 467889999999998875 59999998752 1 22 234788899988876543 33443
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
++.+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++ ++|+|++||+++ ..+.+|+|++|++
T Consensus 585 ~G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 585 GGGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 34689999999999999999999999999999999999999999999886 589999999985 5678999999986
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 699999983
No 276
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-36 Score=327.58 Aligned_cols=205 Identities=19% Similarity=0.335 Sum_probs=169.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|+++|.++..... ++.++|++|++.+++.+
T Consensus 17 ~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (241)
T PRK10895 17 RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRL 93 (241)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccC
Confidence 5999999999999999999999999999999999999998 9999999988754332 35799999998889999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.+..+....... .+....++.+++.+||++..+.. +
T Consensus 94 tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 135 (241)
T PRK10895 94 SVYDNLMAVLQIRDDLSA---------------------------------EQREDRANELMEEFHIEHLRDSM-----G 135 (241)
T ss_pred cHHHHHhhhhhcccccCH---------------------------------HHHHHHHHHHHHHcCCHHHhhcc-----h
Confidence 999999876432210000 00112356778899997655544 4
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.|||||||||+||++++.+|++|+|||||+|||+.+...+.+.|+++.. .+. +|+.++|+..++.+++|++++|++|
T Consensus 136 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~-tiii~sH~~~~~~~~~d~v~~l~~G 213 (241)
T PRK10895 136 QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGL-GVLITDHNVRETLAVCERAYIVSQG 213 (241)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCC-EEEEEEcCHHHHHHhcCEEEEEeCC
Confidence 56999999999999999999999999999999999999999999988753 344 4555677888999999999999999
Q ss_pred eEEEEcChHHHH
Q 001293 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+++++.
T Consensus 214 ~i~~~~~~~~~~ 225 (241)
T PRK10895 214 HLIAHGTPTEIL 225 (241)
T ss_pred eEEeeCCHHHHh
Confidence 999999988763
No 277
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.5e-36 Score=329.35 Aligned_cols=205 Identities=22% Similarity=0.322 Sum_probs=170.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc----------------ccceEE
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----------------PQRTAA 229 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~~ 229 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 14 TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 4999999999999999999999999999999999999998 999999998875321 246799
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHHh-cCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCC
Q 001293 230 YISQHDNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1106)
Q Consensus 230 yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1106)
|++|++.+++.+||+||+.++... .+.. . .+....++.+++.+|+
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl 136 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVLGMA-R---------------------------------AEAEKRAMELLDMVGL 136 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCC
Confidence 999998889999999999886321 1100 0 0011235667889999
Q ss_pred ccccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHH
Q 001293 309 DVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1106)
Q Consensus 309 ~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~ 388 (1106)
++..+.. +..||||||||++||++|+.+|+++||||||+|||+.+...+.+.|+++... .+++++.++|+..++
T Consensus 137 ~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~-~~~tiiivsH~~~~~ 210 (252)
T TIGR03005 137 ADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASE-HDLTMLLVTHEMGFA 210 (252)
T ss_pred hhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEeCCHHHH
Confidence 8766644 4569999999999999999999999999999999999999999999987653 345556677888899
Q ss_pred HhhcCeEEEEcCCeEEEEcChHHHH
Q 001293 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1106)
.+++|++++|++|++++.|+.+++.
T Consensus 211 ~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 211 REFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999988763
No 278
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=7.4e-36 Score=322.95 Aligned_cols=196 Identities=24% Similarity=0.356 Sum_probs=160.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 45999999999999999999999999999999999999998 9999999998755432 1469999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.+......... .+....+..+++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999998653221100 000123456788999987666544
Q ss_pred cccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001293 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1106)
..|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++....+.| |+.++|+..++. .+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-ii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTS-FLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHh-hcCEEEE
Confidence 4699999999999999999999999999999999999999999999876533445 455667766664 5899999
Q ss_pred EcCCeEE
Q 001293 398 LSDGQIV 404 (1106)
Q Consensus 398 L~~G~iv 404 (1106)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 279
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-36 Score=331.81 Aligned_cols=218 Identities=27% Similarity=0.372 Sum_probs=179.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++ ++.+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478899987763 2469999999999999999999999999999999999765 4689999999875
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCC-CCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~-~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..+++.++|++|++.+++.+|+.||+.+....... ...........++++++.+++.+..+.. +..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----VDSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCH
Confidence 32 23456799999998888889999999875321100 0111122345678899999998766665 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 57789999999986 58888
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 88753
No 280
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.1e-36 Score=316.00 Aligned_cols=190 Identities=58% Similarity=0.939 Sum_probs=162.1
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+.+. .++.+|+|+||++++|++++|+|+||||||||+++|+|.....+..|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 467899988875210 12469999999999999999999999999999999999643235689999999876
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
. ..+++.++|++|++.+++.+|++||+.+.... + .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~-------------------~------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALL-------------------R------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHH-------------------h------------------cCCHHHhH
Confidence 5 34556799999999888889999999875311 0 39999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
|++|||||+.+|++|+|||||+|||+.++..+++.++++.++|+|||++||+++.++.+.||++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999877799999999998633678899999998757998876
No 281
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-36 Score=330.08 Aligned_cols=220 Identities=21% Similarity=0.258 Sum_probs=179.3
Q ss_pred CCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeeeEE
Q 001293 851 FEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNI 927 (1106)
Q Consensus 851 ~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i 927 (1106)
.++..+.++|+++.|+ +..+|+|+||+|++|++++|+|+||||||||+++|+|... + .+.+|+|
T Consensus 9 ~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i 75 (260)
T PRK10744 9 TAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEI 75 (260)
T ss_pred CCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEE
Confidence 3455689999988874 2359999999999999999999999999999999999753 1 1358999
Q ss_pred EEcCccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----cccc
Q 001293 928 TISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQS 998 (1106)
Q Consensus 928 ~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~ 998 (1106)
.++|.++.. ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..++.++++++.+++.+ ..+.
T Consensus 76 ~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 76 LLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred EECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhc
Confidence 999987631 234567999999988777 899999987653221 1233344456889999999843 2232
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeE
Q 001293 999 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1078 (1106)
Q Consensus 999 ~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v 1078 (1106)
. +.+||||||||++|||||+.+|+||||||||+|||+.++..+.+.|+++. ++.|||++||++. ++.+.+|++
T Consensus 153 ~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i 225 (260)
T PRK10744 153 S-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYT 225 (260)
T ss_pred C-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEE
Confidence 2 45799999999999999999999999999999999999999999999985 4789999999987 577889999
Q ss_pred EEEecCCEEEEecCCC
Q 001293 1079 FLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1079 ~~l~~Gg~~~~~g~~g 1094 (1106)
++|++ |+++..|+..
T Consensus 226 ~~l~~-G~i~~~g~~~ 240 (260)
T PRK10744 226 AFMYL-GELIEFGNTD 240 (260)
T ss_pred EEEEC-CEEEEeCCHH
Confidence 99986 6888888743
No 282
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-36 Score=345.55 Aligned_cols=202 Identities=24% Similarity=0.295 Sum_probs=173.9
Q ss_pred ceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc---c----ccceEEEEccCCCC
Q 001293 880 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDIH 952 (1106)
Q Consensus 880 ~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~~ 952 (1106)
...+|+|+||+|++||+++|+||||||||||+++|+|... +..|+|.++|.++... . .++.+||++|++.+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3468999999999999999999999999999999999876 5689999999876431 1 23579999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEe
Q 001293 953 SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1032 (1106)
Q Consensus 953 ~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLD 1032 (1106)
++.+||+||+.|....+. ...+...+.+.++++.++|.+..++. +.+||||||||++|||||+.+|+|||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998764432 22344456688999999998877765 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1033 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1033 EPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999865 4899999999987 57889999999986 588888864
No 283
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=7.1e-36 Score=325.95 Aligned_cols=233 Identities=25% Similarity=0.320 Sum_probs=181.2
Q ss_pred EEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHH
Q 001293 119 VRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLAL 198 (1106)
Q Consensus 119 v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L 198 (1106)
|+.+|++.++....+ -+++.|...+.+ ..+...+++|+|+|++|++|++++|+|||||||||||++|
T Consensus 1 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i 67 (236)
T cd03267 1 IEVSNLSKSYRVYSK---EPGLIGSLKSLF----------KRKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKIL 67 (236)
T ss_pred CceecchhhccCcCC---ccccchhHHHHH----------hcccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 356788888765322 233333333322 1233456799999999999999999999999999999999
Q ss_pred hCCCCCCCCceeEEEEcCccCCCC--cccceEEEEc-CCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCC
Q 001293 199 AGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYIS-QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1106)
Q Consensus 199 ~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1106)
+|.++|+ +|+|.++|.+.... ..++.++|++ |++.+++.+||+||+.+.....+...
T Consensus 68 ~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~----------------- 127 (236)
T cd03267 68 SGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDLPP----------------- 127 (236)
T ss_pred hCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCCCH-----------------
Confidence 9999998 99999999875332 2245799997 55667789999999988654332110
Q ss_pred CCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCC
Q 001293 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1106)
Q Consensus 276 ~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD 355 (1106)
++....++.+++.+||++..|+.++ .||||||||++||++|+.+|++++|||||+|||
T Consensus 128 -----------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 185 (236)
T cd03267 128 -----------------ARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLD 185 (236)
T ss_pred -----------------HHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 0011234567888999888877654 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEc
Q 001293 356 SSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1106)
Q Consensus 356 ~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1106)
+.++..+.+.|+++.+.. +++|+.++|+..++.+++|++++|.+|++++.|
T Consensus 186 ~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 186 VVAQENIRNFLKEYNRER-GTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHHhcC-CCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999876533 445555778888899999999999999998765
No 284
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.2e-35 Score=326.74 Aligned_cols=206 Identities=24% Similarity=0.390 Sum_probs=168.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ ...+|+|+++|.++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 4899999999999999999999999999999999999863 12379999999987542 1246799999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1106)
+ +||+||+.+.....+.... .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 7 9999999987543321000 00112356678889997 44444
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+++|+
T Consensus 141 -----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 -----SALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 3457999999999999999999999999999999999999999999998754 3 4556678888899999999
Q ss_pred EEEEcCCeEEEEcChHHHH
Q 001293 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|+++++|+++++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988763
No 285
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-36 Score=334.29 Aligned_cols=218 Identities=23% Similarity=0.318 Sum_probs=176.7
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+... ....++|+||||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67888888774210 001358999999999999999999999999999999999865 46899999998753
Q ss_pred c-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCC
Q 001293 936 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1106)
Q Consensus 936 ~-------~~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~ 1005 (1106)
. ..+++.++|++|++ .+++ .|++||+.|...... ...+...+.++++++.++|.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNFG---VSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 23456799999996 3444 699999987643321 223334456788999999963 44544 4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
..||||||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999998777899999999987 57788999999986 5
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 222 ~i~~~g~~~ 230 (280)
T PRK13649 222 KLVLSGKPK 230 (280)
T ss_pred EEEEeCCHH
Confidence 888888753
No 286
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-36 Score=332.93 Aligned_cols=215 Identities=28% Similarity=0.352 Sum_probs=178.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ +...+|+|+||+|++||++||+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 56788887763 12358999999999999999999999999999999999765 46899999998763
Q ss_pred c-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~-----~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
. ...++.++|++|++. .....||.||+.+..... ....+...+.+.++++.++|.++.+.. +..||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKP-----PHHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCC-----hhhCC
Confidence 1 124567999999963 233479999998764321 123334445688899999998877765 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999777999999999987 57788999999987 58888
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 218 ~g~~~ 222 (275)
T PRK13639 218 EGTPK 222 (275)
T ss_pred eCCHH
Confidence 88754
No 287
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-35 Score=323.14 Aligned_cols=213 Identities=25% Similarity=0.349 Sum_probs=175.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++... ....+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 478899988774210 01359999999999999999999999999999999999865 4689999999875
Q ss_pred Cccc------c-cceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 001293 935 KQET------F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1106)
Q Consensus 935 ~~~~------~-~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~ 1007 (1106)
.... . ++.++|++|++.+++.+|+.||+.+....+. .......+.+.++++.+++.+..+.. +..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHL-----PAQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCC-----hhh
Confidence 4311 1 3579999999988888999999988654321 22233456688999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
||+|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998654 899999999987 35 56999999986 56
Q ss_pred EEE
Q 001293 1087 EIY 1089 (1106)
Q Consensus 1087 ~~~ 1089 (1106)
+++
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 654
No 288
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-36 Score=333.71 Aligned_cols=213 Identities=25% Similarity=0.372 Sum_probs=176.7
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+ ++.+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 46788887764 2358999999999999999999999999999999999776 46899999998753
Q ss_pred c-----ccccceEEEEccCCCC-CCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 Q-----ETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~-----~~~~~~~gyv~q~~~~-~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
. ..+++.++|++|++.. ....|+.||+.+....+ ....+.....++++++.+++.++.+.. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1345679999999753 34468999998764332 123333445678899999998776654 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
||||||++||++|+.+|+||||||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999998777999999999987 57788999999986 58888
Q ss_pred ecCC
Q 001293 1090 VGPL 1093 (1106)
Q Consensus 1090 ~g~~ 1093 (1106)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 8874
No 289
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-36 Score=335.26 Aligned_cols=205 Identities=24% Similarity=0.356 Sum_probs=169.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-------cccceEEEEcCCCC-
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDN- 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1106)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 35999999999999999999999999999999999999998 99999999987432 11357999999862
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
.+..+||+||+.|+....+.. . .+....++.+++.+||. ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS-E---------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 344689999999875432110 0 00112356788999996 455554
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.++||+|
T Consensus 143 -----~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 -----PFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 456999999999999999999999999999999999999999999998753 3 555666888999999999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 290
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-36 Score=332.57 Aligned_cols=204 Identities=26% Similarity=0.377 Sum_probs=167.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCC-CCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+
T Consensus 23 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (271)
T PRK13632 23 NALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGA 99 (271)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcc
Confidence 4899999999999999999999999999999999999998 999999999875432 2467999999863 67789
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 100 tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (271)
T PRK13632 100 TVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP----- 140 (271)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc-----
Confidence 99999998653221100 001124567889999987776654
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.. .++++|+.++|+..++. .+|++++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~-~~d~v~~l~~G 218 (271)
T PRK13632 141 QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK-TRKKTLISITHDMDEAI-LADKVIVFSEG 218 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEEechhHHh-hCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998765 33344444566666664 79999999999
Q ss_pred eEEEEcChHHHH
Q 001293 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (271)
T PRK13632 219 KLIAQGKPKEIL 230 (271)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 291
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=327.48 Aligned_cols=220 Identities=21% Similarity=0.281 Sum_probs=175.3
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC---CCCeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 931 (1106)
.++++|+++.++ .+.+|+|+||+|++|+++||+|+||||||||+++|+|.. ++.+..|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 367888887763 246999999999999999999999999999999999952 2112479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
.++.. ..+++.++|++|++.+++ .|+.||+.+....+.. ...+.....++++++.+++.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 234567999999988776 6999999886543311 11223345678899999986422111111 146
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.||++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5899999999987 57789999999986 68
Q ss_pred EEEecCCC
Q 001293 1087 EIYVGPLG 1094 (1106)
Q Consensus 1087 ~~~~g~~g 1094 (1106)
+++.|+..
T Consensus 223 ~~~~~~~~ 230 (250)
T PRK14245 223 MVEYDDTK 230 (250)
T ss_pred EEEECCHH
Confidence 99998754
No 292
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-36 Score=326.48 Aligned_cols=202 Identities=25% Similarity=0.387 Sum_probs=165.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (237)
T PRK11614 19 QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRM 95 (237)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 35699999998889989
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc-CCcccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1106)
||+||+.++..... . + +. ...++.+++.+ ++.+..++.
T Consensus 96 tv~~~l~~~~~~~~---~-~---~~-----------------------------~~~~~~~l~~~~~l~~~~~~~----- 134 (237)
T PRK11614 96 TVEENLAMGGFFAE---R-D---QF-----------------------------QERIKWVYELFPRLHERRIQR----- 134 (237)
T ss_pred cHHHHHHHhhhccC---h-h---HH-----------------------------HHHHHHHHHHHHHHHHHHhCc-----
Confidence 99999988642110 0 0 00 01123345555 355444433
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
+..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.. .+.| ||.++|+..++.+++|++++|++
T Consensus 135 ~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 135 AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMT-IFLVEQNANQALKLADRGYVLEN 212 (237)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCE-EEEEeCcHHHHHhhCCEEEEEeC
Confidence 456999999999999999999999999999999999999999999998754 3444 55577888899999999999999
Q ss_pred CeEEEEcChHHHH
Q 001293 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (237)
T PRK11614 213 GHVVLEDTGDALL 225 (237)
T ss_pred CEEEeeCCHHHHh
Confidence 9999999998763
No 293
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=5.5e-36 Score=322.30 Aligned_cols=194 Identities=27% Similarity=0.393 Sum_probs=162.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 15 ~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 15 AALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 5999999999999999999999999999999999999998 999999999875432 2357999999998999
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.+.....+.. . + +....++++++.+||++..++.+
T Consensus 92 ~~t~~~~l~~~~~~~~~~-~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~--- 134 (214)
T cd03292 92 DRNVYENVAFALEVTGVP-P-R--------------------------------EIRKRVPAALELVGLSHKHRALP--- 134 (214)
T ss_pred CCcHHHHHHHHHHHcCCC-H-H--------------------------------HHHHHHHHHHHHcCCHHHhhCCh---
Confidence 999999999875432210 0 0 01123566788899987666554
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+..++.++||++++|+
T Consensus 135 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tiiivtH~~~~~~~~~d~i~~l~ 210 (214)
T cd03292 135 --AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AG-TTVVVATHAKELVDTTRHRVIALE 210 (214)
T ss_pred --hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998754 34 455567788888889999999999
Q ss_pred CCeE
Q 001293 400 DGQI 403 (1106)
Q Consensus 400 ~G~i 403 (1106)
+|++
T Consensus 211 ~G~~ 214 (214)
T cd03292 211 RGKL 214 (214)
T ss_pred CCcC
Confidence 9974
No 294
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-36 Score=333.21 Aligned_cols=206 Identities=26% Similarity=0.353 Sum_probs=169.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc----ccceEEEEcCCCC-CCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHDN-HIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1106)
+++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999998 999999999875422 2467999999863 344
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
..||.||+.|+....+... .+....++++++.+||+...++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998754322100 001224577899999988777655
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||++|+.+|+++||||||+|||+.++..+.+.|+++.+..+.| |+.++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-illvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGIT-IILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecChHHHhc-CCEEEEEE
Confidence 4699999999999999999999999999999999999999999999876533444 5556777777765 99999999
Q ss_pred CCeEEEEcChHHHHH
Q 001293 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988753
No 295
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=9.5e-36 Score=330.67 Aligned_cols=224 Identities=23% Similarity=0.293 Sum_probs=178.9
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++||++.++...... ..+++.+|+|+||+|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67888888774210000 0013579999999999999999999999999999999999865 56899999998754
Q ss_pred cc------cccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 001293 936 QE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~ 1006 (1106)
.. .+++.++|++|++ .+.+.+|++||+.+...... .......++.+.++++.+++. .+.+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 31 1356799999997 45677899999986543111 122233445688899999995 555554 35
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
.||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999987 57778999999986 6
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 228 ~i~~~g~~~ 236 (265)
T TIGR02769 228 QIVEECDVA 236 (265)
T ss_pred EEEEECCHH
Confidence 899988853
No 296
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=327.61 Aligned_cols=221 Identities=23% Similarity=0.305 Sum_probs=176.4
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCeeeeEEEEc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNITIS 930 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~ 930 (1106)
..+.++|+++.|+ +..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+..|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3588999988774 2359999999999999999999999999999999999642 11358999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCC
Q 001293 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1106)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~ 1005 (1106)
|.++.. ..+++.++|++|++.+++ .|++||+.+....+.. ...+...+.++++++.+++.+........ .+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987642 234567999999988777 5999999887543321 12223345678889999885421111111 14
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.||++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 6799999999999999999999999999999999999999999999985 4799999999987 57788999999987 5
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
+++..|+..
T Consensus 225 ~i~~~g~~~ 233 (253)
T PRK14242 225 KLIEVGPTE 233 (253)
T ss_pred EEEEeCCHH
Confidence 888888753
No 297
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=7.9e-36 Score=329.84 Aligned_cols=217 Identities=28% Similarity=0.401 Sum_probs=178.2
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ +..+|+|+||++++||+++|+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 45677777663 2469999999999999999999999999999999999765 46899999998754
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhh-cCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWL-RLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~-r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ...++.++|++|++..++.+||+||+.+.... +...........+.+.++++.+++.+..+.. +..||+|
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRD-----MSTLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHH
Confidence 3 23345689999998777789999999875321 1000111122334678899999998776665 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||++||+||+.+|++++|||||+|||+.++..+++.|+++.++|.|||++||+++ ++.+.||++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999998777899999999997 57789999999986 5788888
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+..
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 754
No 298
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=7.7e-36 Score=321.15 Aligned_cols=193 Identities=29% Similarity=0.415 Sum_probs=161.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 16 AALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 4999999999999999999999999999999999999988 999999999876532 2357999999988888
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.++....+... ......++++++.+||++..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (214)
T TIGR02673 93 DRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP--- 135 (214)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998754322100 001123567788999986666544
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ .+|+.++|+..++.++||++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~ 211 (214)
T TIGR02673 136 --EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIILD 211 (214)
T ss_pred --hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEec
Confidence 46999999999999999999999999999999999999999999998754 34 455557788889999999999999
Q ss_pred CCe
Q 001293 400 DGQ 402 (1106)
Q Consensus 400 ~G~ 402 (1106)
+|+
T Consensus 212 ~G~ 214 (214)
T TIGR02673 212 DGR 214 (214)
T ss_pred CCC
Confidence 985
No 299
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=327.35 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=164.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|++|++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 48999999999999999999999999999999999998620 1289999999886421 1246799999988777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1106)
.+||+||+.|+....+.... ......++..++.+|+. +..++
T Consensus 101 -~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 49999999987543221000 00112345566777763 33444
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.++.|||||||||+|||+|+.+|++|+|||||+|||+.+...+++.|+++. .+ ++|+.++|+..++.+++|+
T Consensus 147 -----~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 -----NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 24 4555678888889999999
Q ss_pred EEEEcCCeEEEEcChHHHH
Q 001293 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 300
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.2e-36 Score=325.02 Aligned_cols=211 Identities=25% Similarity=0.313 Sum_probs=173.2
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++||++.++ +.++|+|+||++++|+++||+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 5677777663 2469999999999999999999999999999999999875 568999999987542
Q ss_pred c----cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcC-CccccccccCCCCCCCCCHH
Q 001293 937 E----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE-LNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 937 ~----~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~-l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ..++.++|++|++.+++.+|+.||+.+....+. .. ..+.++++++.++ +.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHH
Confidence 1 124579999999988888999999988653321 11 1223566777776 45544544 4579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999998764 899999999987 57778999999986 588888
Q ss_pred cCCCC
Q 001293 1091 GPLGR 1095 (1106)
Q Consensus 1091 g~~g~ 1095 (1106)
|+...
T Consensus 214 ~~~~~ 218 (230)
T TIGR03410 214 GAGDE 218 (230)
T ss_pred CCHHH
Confidence 88643
No 301
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=9.4e-36 Score=320.11 Aligned_cols=198 Identities=23% Similarity=0.298 Sum_probs=167.1
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc-ccccceEEEEccCCCCCCCCCHHHH
Q 001293 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTIYES 961 (1106)
Q Consensus 883 ~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~q~~~~~~~~tv~e~ 961 (1106)
+++|+|+++++|++++|+|+||||||||+++|+|... +..|+|.++|.++.. ...++.++|++|++.+++.+|++||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3579999999999999999999999999999999876 468999999987643 2345679999999988888999999
Q ss_pred HHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHH
Q 001293 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1106)
Q Consensus 962 l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~ 1041 (1106)
+.+...... ... ...+..++++++.+++.+..++. +..||+|||||++|||+|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987532211 111 12244578899999998777665 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecC
Q 001293 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1092 (1106)
Q Consensus 1042 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~ 1092 (1106)
++..+++.|+++.++ |+|||++||++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999987 57788999999986 68888775
No 302
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=328.48 Aligned_cols=205 Identities=33% Similarity=0.511 Sum_probs=169.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (258)
T PRK13548 16 TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFT 92 (258)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCC
Confidence 4999999999999999999999999999999999999998 9999999988754322 356999999988878899
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.++....+. .. + +....++.+++.+||++..++.+ .
T Consensus 93 v~e~l~~~~~~~~~-~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 133 (258)
T PRK13548 93 VEEVVAMGRAPHGL-SR-A--------------------------------EDDALVAAALAQVDLAHLAGRDY-----P 133 (258)
T ss_pred HHHHHHhhhcccCC-Cc-H--------------------------------HHHHHHHHHHHHcCCHhHhcCCc-----c
Confidence 99999886422110 00 0 01123566788999987666554 4
Q ss_pred CCChhhhHHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEE
Q 001293 323 GISGGQKKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~------~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1106)
.|||||||||+||+||+ .+|++|+|||||+|||+.+...+.+.|+++.+..+ .+|+.++|+..++.++||+|+
T Consensus 134 ~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~ 212 (258)
T PRK13548 134 QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRIV 212 (258)
T ss_pred cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEEE
Confidence 69999999999999999 59999999999999999999999999998763334 455557788888999999999
Q ss_pred EEcCCeEEEEcChHHHH
Q 001293 397 LLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++++.|+.+++.
T Consensus 213 ~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 213 LLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEECCEEEeeCCHHHHh
Confidence 99999999999988764
No 303
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=9.4e-36 Score=330.39 Aligned_cols=220 Identities=26% Similarity=0.343 Sum_probs=179.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeeeEEEEcCcc
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1106)
-+.++||++.++ +..+|+|+||++++||+++|+|+||||||||+++|+|...+. ...|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 377888887763 246999999999999999999999999999999999976532 236999999987
Q ss_pred CCc--------ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCC-----CCCChHHHHHHHHHHHHHcCCcccccccc
Q 001293 934 KKQ--------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-----PEVDSETRKMFIDEVMELVELNPLRQSLV 1000 (1106)
Q Consensus 934 ~~~--------~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~-----~~~~~~~~~~~v~~~l~~~~l~~~~~~~~ 1000 (1106)
... ...++.++|++|++.+++.+|++||+.+......+ .....+..+..++++++.+++.+..+..
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~- 149 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQR- 149 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCC-
Confidence 532 12345799999999888889999999875321000 0111223345688999999998776665
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEE
Q 001293 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELF 1079 (1106)
Q Consensus 1001 g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~ 1079 (1106)
+..||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ +|+|||++||+++ ++.+.||+++
T Consensus 150 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 150 ----VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred ----ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 357999999999999999999999999999999999999999999999875 4899999999987 4788999999
Q ss_pred EEecCCEEEEecCCC
Q 001293 1080 LMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1080 ~l~~Gg~~~~~g~~g 1094 (1106)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9986 5888888854
No 304
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=331.09 Aligned_cols=205 Identities=25% Similarity=0.361 Sum_probs=170.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCC-CCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1106)
.+|+|||+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4999999999999999999999999999999999999998 9999999988754322 356899999863 35568
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++....+... .+....++.+++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999988654321100 001123567889999987776654
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.||||||||++||+||+.+|++|||||||+|||+.++..+.+.|+++... .+++|+.++|+..++.+.||+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPET-YGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 469999999999999999999999999999999999999999999987653 2455566788888999999999999999
Q ss_pred eEEEEcChHHHH
Q 001293 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998874
No 305
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=323.01 Aligned_cols=212 Identities=27% Similarity=0.395 Sum_probs=178.9
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ .+.+|+|+|++++||++++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5677877764 2469999999999999999999999999999999999876 468999999987643
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 001293 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1106)
Q Consensus 937 ~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqr 1015 (1106)
. ..++.++|++|++..++.+|++||+.+....+. .......+.++++++.+++.+..+.. +..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRK-----PSQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHH
Confidence 2 234679999999988888999999987654331 22333445678899999998877765 35799999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1016 l~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
++|||+|+.+|++++|||||+|||+.++..+++.++++.++ |+|||+++|++. ++.+.||++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999986 57888999999986 588888864
No 306
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.6e-35 Score=324.95 Aligned_cols=210 Identities=23% Similarity=0.342 Sum_probs=170.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 16 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 16 KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 5999999999999999999999999999999999999998 9999999988754332 24699999999999999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++...... .+...... ...+....++++++.+|+++..++.+
T Consensus 93 tv~~nl~~~~~~~~~--~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (242)
T TIGR03411 93 TVFENLELALPRDKS--VFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLA----- 141 (242)
T ss_pred CHHHHHHHhhhcccc--cccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 999999986432100 00000000 00011234677889999987666554
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.++||+|++|++|
T Consensus 142 ~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g 218 (242)
T TIGR03411 142 GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQG 218 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998753 3 45556778888999999999999999
Q ss_pred eEEEEcChHHH
Q 001293 402 QIVYQGPRELV 412 (1106)
Q Consensus 402 ~iv~~G~~~~~ 412 (1106)
+++++|+.+++
T Consensus 219 ~~~~~~~~~~~ 229 (242)
T TIGR03411 219 SVLAEGSLDQV 229 (242)
T ss_pred eEEeeCCHHHH
Confidence 99999998876
No 307
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=328.98 Aligned_cols=215 Identities=23% Similarity=0.320 Sum_probs=172.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCC-CCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1106)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999998 999999999875432 2457999999874 67888
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
|+++|+.|.....+... + .....++.+++.+||.+..++. +
T Consensus 100 ~v~~~~~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~-----~ 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY--D--------------------------------EMHRRVSEALKQVDMLERADYE-----P 140 (269)
T ss_pred cHHHHHHhhHHhcCCCH--H--------------------------------HHHHHHHHHHHHcCCchhhhCC-----c
Confidence 99999988754321100 0 0112356678899998766654 4
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++....+.|+ +.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~ti-iivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITI-ISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEE-EEEecCchHHhc-CCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998754334454 446666677765 9999999999
Q ss_pred eEEEEcChHHHHH---HHHhCCCCCC
Q 001293 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1106)
Q Consensus 402 ~iv~~G~~~~~~~---~f~~~G~~~p 424 (1106)
++++.|+++++.+ .+...|+++|
T Consensus 219 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 244 (269)
T PRK13648 219 TVYKEGTPTEIFDHAEELTRIGLDLP 244 (269)
T ss_pred EEEEecCHHHHhcCHHHHHhcCCCCC
Confidence 9999999987643 3334444443
No 308
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.3e-35 Score=340.86 Aligned_cols=204 Identities=22% Similarity=0.309 Sum_probs=175.1
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc----cCCc---cc---c-cceEEEEc
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY----PKKQ---ET---F-ARISGYCE 947 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~gyv~ 947 (1106)
+...+|+|+||+|++||+++|+|+||||||||+++|+|... +..|+|.++|. ++.. .. + ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 45679999999999999999999999999999999999876 56899999995 3221 11 1 25799999
Q ss_pred cCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Q 001293 948 QNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1027 (1106)
Q Consensus 948 q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~ 1027 (1106)
|++.+++.+||+||+.|+...+. ...+.....+.++++.++|.+..+.. +.+||||||||++|||||+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~g---~~~~~~~~~a~e~le~vgL~~~~~~~-----~~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQG---MPEAERRKRVDEQLELVGLAQWADKK-----PGELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999998854332 33455566788999999998877765 35799999999999999999999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1028 illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
||||||||+|||+.++..+++.|+++.++ |+|||++|||++ ++.+.+|++++|++ |+++..|+..
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999998764 899999999987 57899999999986 5888988853
No 309
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=316.16 Aligned_cols=196 Identities=30% Similarity=0.581 Sum_probs=162.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeeeEEEEcCcc
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1106)
.+.|+||+|.|+.+ .+++.+|+|+||+|++|++++|+|+||||||||+++|+|...+. +..|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999999753 13457999999999999999999999999999999999976532 568999999987
Q ss_pred CCc--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 934 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 934 ~~~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
... ...++.++|++|++.+++.+||+||+.+..... .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 235667999999998888899999998753210 1222 3569999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||++|||||+.+|++|||||||+|||+.+++.+++.++++.++ +.|+|+++|+...++.+.||++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999998765 677776665543367889999999987 578776
Q ss_pred c
Q 001293 1091 G 1091 (1106)
Q Consensus 1091 g 1091 (1106)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 310
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-36 Score=342.19 Aligned_cols=212 Identities=26% Similarity=0.421 Sum_probs=177.3
Q ss_pred CCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcC
Q 001293 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1106)
Q Consensus 852 ~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 931 (1106)
.+.+|+|+||.++|. +++++|+|+||+|++||++||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 355799999999986 23469999999999999999999999999999999998654 489999999
Q ss_pred ccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccc-------cccC
Q 001293 932 YPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-------SLVG 1001 (1106)
Q Consensus 932 ~~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~g 1001 (1106)
.+++. ..+|+.+|||||+..++. -||.+|+.|+. ++... ++|-++.+..++.+... +.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~----eeV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASD----EEVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCH----HHHHHHHHHcCcHHHHHhccccchhhHh
Confidence 98754 568889999999887765 59999999873 33333 33566677777655333 3355
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEE
Q 001293 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1106)
Q Consensus 1002 ~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1081 (1106)
..| ..|||||||||+||||++++|+|+++|||||.||.++.+.|++.+.+.. .|+|+|++.|+++ +.+.||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~-~~rTvI~IvH~l~--ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVM-SGRTVIMIVHRLD--LLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhc-CCCeEEEEEecch--hHhcCCEEEEE
Confidence 554 5799999999999999999999999999999999999999999999954 5899999999974 78899999999
Q ss_pred ecCCEEEEecCC
Q 001293 1082 KRGGQEIYVGPL 1093 (1106)
Q Consensus 1082 ~~Gg~~~~~g~~ 1093 (1106)
++| ++...|+.
T Consensus 559 ~nG-~v~e~gth 569 (591)
T KOG0057|consen 559 DNG-TVKEYGTH 569 (591)
T ss_pred ECC-eeEEeccH
Confidence 985 77777774
No 311
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=331.16 Aligned_cols=203 Identities=27% Similarity=0.395 Sum_probs=168.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc----ccceEEEEcCCCC-CCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHDN-HIGE 240 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~~ 240 (1106)
.+|+|||++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4999999999999999999999999999999999999998 999999999875432 1357999999864 4677
Q ss_pred CCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 001293 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.|+....+... .+....++.+++.+||.+..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLPP----------------------------------IEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 899999998754322100 001123567788999987777654
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998754 3 44555567777777 56999999999
Q ss_pred CeEEEEcChHHHH
Q 001293 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 312
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-35 Score=327.13 Aligned_cols=220 Identities=22% Similarity=0.298 Sum_probs=172.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.+
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (255)
T PRK11300 19 LAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREM 95 (255)
T ss_pred EEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCC
Confidence 5999999999999999999999999999999999999998 9999999998765332 23589999999999999
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.++....... +........ ... .. ...+....++.+++.+||.+..++.+
T Consensus 96 tv~enl~~~~~~~~~~---~~~~~~~~~---~~~--~~-----------~~~~~~~~~~~~l~~~gl~~~~~~~~----- 151 (255)
T PRK11300 96 TVIENLLVAQHQQLKT---GLFSGLLKT---PAF--RR-----------AESEALDRAATWLERVGLLEHANRQA----- 151 (255)
T ss_pred cHHHHHHHhhhccccc---hhhhhhccc---ccc--cc-----------chhHHHHHHHHHHHhCChhhhhhCCh-----
Confidence 9999999864311000 000000000 000 00 00011234567788999986666544
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ ..+++||.++|+..++.++||++++|++|
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 32455666788888999999999999999
Q ss_pred eEEEEcChHHHH
Q 001293 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+.+++.
T Consensus 231 ~i~~~~~~~~~~ 242 (255)
T PRK11300 231 TPLANGTPEEIR 242 (255)
T ss_pred eEEecCCHHHHh
Confidence 999999988763
No 313
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=335.92 Aligned_cols=226 Identities=23% Similarity=0.245 Sum_probs=182.6
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++.+|++++|+...... ...+...+|+||||+|++||++||+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 478899987775321100 00113469999999999999999999999999999999999875 4589999999876
Q ss_pred Cc------ccccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccccCCCCC
Q 001293 935 KQ------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 1005 (1106)
Q Consensus 935 ~~------~~~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~g~~g~ 1005 (1106)
.. ..+++.++|++|++ .+.+.+|+.+++.+..... .....+..++.+.++++.++|.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 43 13456799999998 5778899999987654332 12334455667899999999964 44544 4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
.+||||||||++|||||+.+|+|||+||||++||..++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|++
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999998764 999999999987 46778999999986
Q ss_pred CEEEEecCCC
Q 001293 1085 GQEIYVGPLG 1094 (1106)
Q Consensus 1085 g~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 231 G~ive~g~~~ 240 (327)
T PRK11308 231 GRCVEKGTKE 240 (327)
T ss_pred CEEEEECCHH
Confidence 6999999843
No 314
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-35 Score=327.63 Aligned_cols=226 Identities=23% Similarity=0.255 Sum_probs=181.4
Q ss_pred cCCCCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---Ceeee
Q 001293 849 LPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITG 925 (1106)
Q Consensus 849 ~p~~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G 925 (1106)
.|..+..+.++|++++++ .+++|+|+||++++||++||+|+||||||||+++|+|...+ .+..|
T Consensus 14 ~~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G 80 (267)
T PRK14237 14 FPEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTG 80 (267)
T ss_pred cCCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcce
Confidence 344455789999988774 24699999999999999999999999999999999997642 14689
Q ss_pred EEEEcCccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccccc
Q 001293 926 NITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLV 1000 (1106)
Q Consensus 926 ~i~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~ 1000 (1106)
+|.++|.+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.+.++++.+++.+..+...
T Consensus 81 ~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 157 (267)
T PRK14237 81 QILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAG--VKDKKVLDEIVETSLKQAALWDQVKDDL 157 (267)
T ss_pred EEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCchhhhhh
Confidence 99999987632 134567999999988776 699999988643211 1123334566788999998853221111
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEE
Q 001293 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1106)
Q Consensus 1001 g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~ 1080 (1106)
.. .+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++
T Consensus 158 ~~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~ 234 (267)
T PRK14237 158 HK-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAF 234 (267)
T ss_pred cC-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEE
Confidence 11 246799999999999999999999999999999999999999999999985 4799999999987 57889999999
Q ss_pred EecCCEEEEecCCC
Q 001293 1081 MKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1081 l~~Gg~~~~~g~~g 1094 (1106)
|++ |++++.|+..
T Consensus 235 l~~-G~i~~~g~~~ 247 (267)
T PRK14237 235 FYL-GDLIEYDKTR 247 (267)
T ss_pred EEC-CEEEEeCCHH
Confidence 986 6899988854
No 315
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=330.08 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=166.7
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc-------ccceEEEEcCCCC-
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN- 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1106)
+++|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999998 999999998875421 2357999999852
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-ccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1106)
.+...||+||+.|.....+.. . .+....++.+++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS-Q---------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 344579999999865332110 0 001123566788899963 44443
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
++.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|++
T Consensus 143 -----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 -----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEE
Confidence 456999999999999999999999999999999999999999999998754 3 445555778888899999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999998764
No 316
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=327.30 Aligned_cols=204 Identities=25% Similarity=0.357 Sum_probs=168.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC----------------cccceEE
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF----------------VPQRTAA 229 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~~ 229 (1106)
++|+|+|+.|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (257)
T PRK10619 19 EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLT 95 (257)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceE
Confidence 4999999999999999999999999999999999999988 99999999876421 1135799
Q ss_pred EEcCCCCCCCCCCHHHHHHHHHH-hcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCC
Q 001293 230 YISQHDNHIGEMTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1106)
Q Consensus 230 yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1106)
||+|++.+++.+||+||+.++.. ..+. .. .+....+.++++.+||
T Consensus 96 ~v~q~~~l~~~~sv~enl~~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~gl 141 (257)
T PRK10619 96 MVFQHFNLWSHMTVLENVMEAPIQVLGL-SK---------------------------------QEARERAVKYLAKVGI 141 (257)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhCCC-CH---------------------------------HHHHHHHHHHHHHcCC
Confidence 99999988999999999987542 1110 00 0011235667889999
Q ss_pred cccc-ccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhH
Q 001293 309 DVCA-DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPE 387 (1106)
Q Consensus 309 ~~~~-dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~ 387 (1106)
.+.. +. .+..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.. . +.+|+.++|+..+
T Consensus 142 ~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~~ 214 (257)
T PRK10619 142 DERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMGF 214 (257)
T ss_pred ChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHH
Confidence 7643 43 3457999999999999999999999999999999999999999999998754 3 4555557888888
Q ss_pred HHhhcCeEEEEcCCeEEEEcChHHHH
Q 001293 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 388 ~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1106)
+..+||+|++|++|++++.|+++++.
T Consensus 215 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 215 ARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 99999999999999999999988763
No 317
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-35 Score=326.67 Aligned_cols=209 Identities=20% Similarity=0.302 Sum_probs=165.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 49999999999999999999999999999999999987510 0289999999886432 1245799999988777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ +||+||+.|+.+..+... + +....++.+++.+|+........ +
T Consensus 106 ~-~tv~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 149 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGANK--K--------------------------------DLDGVVENALRSAALWDETSDRL-K 149 (258)
T ss_pred c-ccHHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCCcchhhhh-c
Confidence 7 899999998754322100 0 00123456778888742111111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.++||+|++|
T Consensus 150 ~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~~-~tiiivsH~~~~~~~~~d~i~~l 226 (258)
T PRK14268 150 SPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--KD-YTIVIVTHNMQQAARISDYTGFF 226 (258)
T ss_pred CChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--hC-CEEEEEECCHHHHHHhCCEEEEE
Confidence 3345799999999999999999999999999999999999999999999874 24 55566788888999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 227 ~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 227 LMGELIEFGQTRQIF 241 (258)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 318
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=335.53 Aligned_cols=223 Identities=18% Similarity=0.232 Sum_probs=178.8
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC-C-eeeeEEEEcCcc
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNITISGYP 933 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~~ 933 (1106)
++++|++..|+.+. +...+|+||||+|++||++||+|+||||||||+++|+|...+ + +..|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDES---------APFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCCC---------ccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 67888887775321 124699999999999999999999999999999999997642 2 368999999987
Q ss_pred CCcc---c----ccceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCC
Q 001293 934 KKQE---T----FARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1106)
Q Consensus 934 ~~~~---~----~~~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g 1004 (1106)
+... . .++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.++|.+..+.....
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 6431 1 124699999998 46788999988776543221 123445566788999999997532211111
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1005 ~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
+.+||||||||++|||||+.+|++||+||||+|||+.++..|++.|+++.+ .|.|||++|||++ .+.+.+|++++|++
T Consensus 151 p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~~ 229 (326)
T PRK11022 151 PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMYA 229 (326)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999976 4899999999987 47788999999986
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|+++..|+.
T Consensus 230 -G~ive~g~~ 238 (326)
T PRK11022 230 -GQVVETGKA 238 (326)
T ss_pred -CEEEEECCH
Confidence 699999874
No 319
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-35 Score=324.54 Aligned_cols=200 Identities=25% Similarity=0.393 Sum_probs=165.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 4999999999999999999999999999999999999998 999999998875432 2467999999887775 69
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGDEMI 321 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1106)
|+||+.++....+ . ....++.+++.+||+ +..++ .+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999987542210 0 001245678889996 34443 34
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++....+. +|+.++|+..++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~-tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNL-TVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCC-EEEEEeccHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999987643344 5555788888899999999999999
Q ss_pred eEEEEcChHHHH
Q 001293 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988763
No 320
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=9.1e-36 Score=323.80 Aligned_cols=198 Identities=23% Similarity=0.376 Sum_probs=166.5
Q ss_pred eeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCCCCCCHHHHHH
Q 001293 884 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 963 (1106)
Q Consensus 884 L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~ 963 (1106)
|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.++..... ..+|++|++.+++.+|+.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999875 468999999987643221 2489999998888899999998
Q ss_pred HHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHH
Q 001293 964 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1106)
Q Consensus 964 ~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~ 1043 (1106)
+...... .....+...+.+.++++.+++.+..+.. +..||||||||++|||+|+.+|++|||||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7632111 1223334445678899999998766655 357999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1044 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1044 ~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999987 57888999999986 588888874
No 321
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=325.85 Aligned_cols=209 Identities=25% Similarity=0.338 Sum_probs=174.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 68 (241)
T PRK14250 4 IEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIK 68 (241)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 67888887764 2358999999999999999999999999999999999765 46899999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCHH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSgG 1011 (1106)
. ..+++.++|++|++.+++ .|++||+.+....+ . . ....+.++++.+++. ++.+.. +..||||
T Consensus 69 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~--~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G 135 (241)
T PRK14250 69 TIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G--E--KNVDVEYYLSIVGLNKEYATRD-----VKNLSGG 135 (241)
T ss_pred hcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C--c--HHHHHHHHHHHcCCCHHHhhCC-----cccCCHH
Confidence 2 234567999999988776 69999998754321 1 1 123577889999996 455543 4579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.
T Consensus 136 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 213 (241)
T PRK14250 136 EAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEY 213 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 999999999999999999999999999999999999999998764 899999999987 57788999999986 588888
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 214 ~~~~ 217 (241)
T PRK14250 214 AKTY 217 (241)
T ss_pred CCHH
Confidence 8754
No 322
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.1e-35 Score=327.94 Aligned_cols=206 Identities=27% Similarity=0.344 Sum_probs=169.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCC--C
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 236 (1106)
+.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|+++|.++.... .++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999998 999999998876432 235699999986 4
Q ss_pred CCCCCCHHHHHHHHHHhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccc
Q 001293 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1106)
+++.+||+||+.+..... +.. . ......++.+++.+||. ...+.
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~~~-------~---------------------------~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTSLD-------E---------------------------SEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcCCC-------H---------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 667899999998764311 000 0 00112356778899995 45554
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
. ++.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.... +++|+.++|+...+.+++|+
T Consensus 147 ~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 L-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhcE
Confidence 4 45699999999999999999999999999999999999999999999876532 44566678888899999999
Q ss_pred EEEEcCCeEEEEcChHHHH
Q 001293 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1106)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998764
No 323
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-35 Score=325.15 Aligned_cols=220 Identities=20% Similarity=0.262 Sum_probs=176.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC-CeeeeEEEEcCccC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 934 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 934 (1106)
+.++|+++.|+ ++.+|+|+||+|++|++++|+|+||||||||+++|+|...+ .+..|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56788887764 24699999999999999999999999999999999997532 24689999999876
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
.. ..+++.++|++|++.+++ .|++||+.+....+.... .....++.++++++.+++.+........ .+..||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQ-NALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcC-CcccCCHH
Confidence 43 234567999999988876 699999988654332111 1223345578899999995422111111 14679999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ |+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999987 57789999999986 6899988
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+..
T Consensus 224 ~~~ 226 (246)
T PRK14269 224 ESK 226 (246)
T ss_pred CHH
Confidence 754
No 324
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.6e-35 Score=320.38 Aligned_cols=195 Identities=24% Similarity=0.335 Sum_probs=163.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 16 QALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 5999999999999999999999999999999999999998 999999998875432 2357999999988889
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.+.....+... ++....++.+++.+||.+..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (222)
T PRK10908 93 DRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP--- 135 (222)
T ss_pred cccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc---
Confidence 9999999998754322100 001113456788899987666544
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|+++.. . +++++.++|+..++...+|+|++|+
T Consensus 136 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (222)
T PRK10908 136 --IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTLS 211 (222)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4556667888889999999999999
Q ss_pred CCeEE
Q 001293 400 DGQIV 404 (1106)
Q Consensus 400 ~G~iv 404 (1106)
+|+++
T Consensus 212 ~G~i~ 216 (222)
T PRK10908 212 DGHLH 216 (222)
T ss_pred CCEEc
Confidence 99985
No 325
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.8e-34 Score=359.88 Aligned_cols=211 Identities=27% Similarity=0.399 Sum_probs=177.2
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1106)
...++|+||+|+|+. .++++|+|+|++|+|||++||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 475 ~~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~ 541 (710)
T TIGR03796 475 SGYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGI 541 (710)
T ss_pred CCeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCE
Confidence 357999999999863 12468999999999999999999999999999999999876 56899999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccc-------cccCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-------SLVGL 1002 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~g~ 1002 (1106)
++.+ ..+++.+|||+|++.++. .|++||+.++. ++.+ ++.++++++..++.+..+ ..+|.
T Consensus 542 ~i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e 611 (710)
T TIGR03796 542 PREEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIP----DADLVRACKDAAIHDVITSRPGGYDAELAE 611 (710)
T ss_pred eHHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCC----HHHHHHHHHHhCCHHHHHhCcCcccceecc
Confidence 8654 457889999999998875 69999998641 2222 234678888888876543 33443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
++.+||||||||++|||||+++|+||+||||||+||+++++.|++.+++ .++|+|++||+++ ....||++++|+
T Consensus 612 -~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~ 685 (710)
T TIGR03796 612 -GGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLE 685 (710)
T ss_pred -CCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEe
Confidence 3468999999999999999999999999999999999999999999986 4899999999986 467799999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++..|+.
T Consensus 686 ~-G~i~~~G~~ 695 (710)
T TIGR03796 686 R-GKVVQRGTH 695 (710)
T ss_pred C-CEEEEecCH
Confidence 6 689998873
No 326
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-35 Score=325.25 Aligned_cols=207 Identities=22% Similarity=0.315 Sum_probs=164.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCC-----cccceEEEEcCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1106)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 49999999999999999999999999999999999864 35 89999999887531 1245799999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+++ .||+||+.|+....+.... + .....++.+++.+||.+...+.
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK-A--------------------------------YLAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHH
Confidence 7777 5999999987543221100 0 0012345567778875422222
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
. ++.++.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+++|+|
T Consensus 143 ~-~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v 218 (253)
T PRK14242 143 L-HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVT 218 (253)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEE
Confidence 2 23456799999999999999999999999999999999999999999999873 24 45555778888999999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+++++.
T Consensus 219 ~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 219 AFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 327
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=330.41 Aligned_cols=216 Identities=24% Similarity=0.314 Sum_probs=179.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++. +++.+|+|+||++++|++++|+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 4788999887741 12458999999999999999999999999999999999865 4689999999886
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..+++.++|++|++. .++.+|++||+.+..... ....+.....+.++++.+++.+..+.. +..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKE-----PQNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCC-----cccCCH
Confidence 43 235667999999974 566789999998864322 122333455678899999998877765 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ ++|||+++|+++ ++ +.||++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 599999999987 35 57999999986 58888
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 223 ~g~~~ 227 (271)
T PRK13632 223 QGKPK 227 (271)
T ss_pred ecCHH
Confidence 88753
No 328
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=327.80 Aligned_cols=216 Identities=23% Similarity=0.266 Sum_probs=177.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 931 (1106)
.+.++||++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|...+ .+..|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999988874 24699999999999999999999999999999999997642 13689999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccc----cccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL----RQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~----~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++. |+.||+.|....+.. ........+.++++++.+++.+. .+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87632 2345679999999887764 999999987543321 11223334567889999998542 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.+ ++|||++||+++ .+.+.||++++|+
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 789999999987 5778899999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++..|+.
T Consensus 237 ~-G~i~~~g~~ 246 (267)
T PRK14235 237 L-GNLVEVGDT 246 (267)
T ss_pred C-CEEEEeCCH
Confidence 6 689998874
No 329
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=331.90 Aligned_cols=219 Identities=22% Similarity=0.304 Sum_probs=179.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.|+.... ...+.+|+||||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~ 75 (280)
T PRK13633 5 IKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTS 75 (280)
T ss_pred EEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecc
Confidence 778999888752100 012469999999999999999999999999999999999876 46899999998764
Q ss_pred c----ccccceEEEEccCCCC-CCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 936 Q----ETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 936 ~----~~~~~~~gyv~q~~~~-~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
. ...++.+||++|++.. ....|+.|++.|..... .......++.++++++.++|.+..++. +..||+
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS~ 147 (280)
T PRK13633 76 DEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHA-----PHLLSG 147 (280)
T ss_pred ccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 3 2346789999999742 23468999998875432 223344456788999999998887766 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++||++|+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++. .||++++|++ |++++
T Consensus 148 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~~ 224 (280)
T PRK13633 148 GQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVVM 224 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998754 999999999987 454 4999999986 58888
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 225 ~g~~~ 229 (280)
T PRK13633 225 EGTPK 229 (280)
T ss_pred ecCHH
Confidence 88753
No 330
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.3e-35 Score=335.68 Aligned_cols=224 Identities=19% Similarity=0.285 Sum_probs=180.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-eeeeEEEEcCcc
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 933 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 933 (1106)
-+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ...|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47889988776421 12356999999999999999999999999999999999976531 238999999988
Q ss_pred CCcc---c---cc-ceEEEEccCC--CCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCC
Q 001293 934 KKQE---T---FA-RISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 1004 (1106)
Q Consensus 934 ~~~~---~---~~-~~~gyv~q~~--~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g 1004 (1106)
+... . ++ +.++|++|++ .+.|.+|+.+++.+...... ....++..+.+.++++.++|.+..+.....
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~~~~-- 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRMKMY-- 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHhcCC--
Confidence 6431 1 22 4799999998 57788999999876543322 233444556788899999997533221112
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1005 ~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
+.+||||||||++|||||+.+|+|||+||||+|||+.++..|++.|+++.++ |.|||++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999999765 899999999987 46778999999986
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|++++.|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 699999984
No 331
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=333.20 Aligned_cols=219 Identities=21% Similarity=0.301 Sum_probs=176.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|++++|+... .....+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 578999988874210 001258999999999999999999999999999999999875 4689999999865
Q ss_pred C--------cccccceEEEEccCCCC-CCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCC
Q 001293 935 K--------QETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPG 1004 (1106)
Q Consensus 935 ~--------~~~~~~~~gyv~q~~~~-~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g 1004 (1106)
. ...+++.++|++|++.. ....|++||+.|..... ....+...+.+.++++.++|. ++.+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 2 12345679999999742 22369999998864321 122333445678899999994 555554
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1005 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1005 ~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.||++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999999875 4899999999987 57889999999986
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 588888874
No 332
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=324.52 Aligned_cols=203 Identities=26% Similarity=0.345 Sum_probs=167.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC------C---cccceEEEEcCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE------F---VPQRTAAYISQHDN 236 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 236 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 4999999999999999999999999999999999999998 9999999987621 1 12357999999998
Q ss_pred CCCCCCHHHHHHHH-HHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 237 HIGEMTVRETLAFS-ARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
+++.+||+||+.+. ....+.. . .+....++.+++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS-K---------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 99999999999753 2221110 0 00112356778899998766654
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
+ +.|||||||||+|||+++.+|++++|||||+|||+.+...+.+.|+++.. .+ ++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TG-ITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEE
Confidence 4 46999999999999999999999999999999999999999999998753 34 45556778888888999999
Q ss_pred EEEcCCeEEEEcChHHH
Q 001293 396 ILLSDGQIVYQGPRELV 412 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~ 412 (1106)
++|.+|+++++|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999998764
No 333
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=327.56 Aligned_cols=204 Identities=28% Similarity=0.399 Sum_probs=168.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-----cccceEEEEcCCCC-CCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDN-HIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~-~~~ 239 (1106)
++|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 4999999999999999999999999999999999999998 99999999987421 12367999999853 345
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+||+||+.|+....+. .. .+....+..+++.+||.+..++.+
T Consensus 93 ~~tv~e~i~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~--- 135 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL-SK---------------------------------EEVEKRVKEALKAVGMEGFENKPP--- 135 (275)
T ss_pred cccHHHHHHHHHHHcCC-CH---------------------------------HHHHHHHHHHHHHCCCchhhcCCh---
Confidence 67999999876432111 00 001123567889999987777654
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||++++|+
T Consensus 136 --~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 136 --HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998764 3 4556667888889999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999999874
No 334
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.7e-35 Score=320.14 Aligned_cols=197 Identities=27% Similarity=0.332 Sum_probs=161.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5999999999999999999999999999999999999998 9999999998765432 24699999998888
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.+.....+.. . .+....++.+++.+||.+..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGES-S---------------------------------RQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 9999999998865332110 0 001123567788999987666554
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++...+.| |+.++|+..++ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~t-ii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTT-LILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999876533444 44566676666 559999999
Q ss_pred cCCeEEEE
Q 001293 399 SDGQIVYQ 406 (1106)
Q Consensus 399 ~~G~iv~~ 406 (1106)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 335
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=327.98 Aligned_cols=204 Identities=27% Similarity=0.374 Sum_probs=167.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC--C---cccceEEEEcCCCC-CCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--F---VPQRTAAYISQHDN-HIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~~ 239 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++||+|++. .++
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 4999999999999999999999999999999999999998 9999999998742 1 12357999999864 345
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
..|+.||+.+.....+... + +....++.+++.+||.+..++.+
T Consensus 92 ~~~~~~~l~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~--- 134 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE--A--------------------------------EITRRVDEALTLVDAQHFRHQPI--- 134 (271)
T ss_pred cccHHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCHhHhcCCc---
Confidence 6789999988653322100 0 01123466788899987666554
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..||||||||++||++|+.+|++|||||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++.+++|++++|+
T Consensus 135 --~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 135 --QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVLR 210 (271)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998764 34 456667888889999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998764
No 336
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-35 Score=335.31 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=168.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||+|++.++
T Consensus 96 ~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~ 175 (329)
T PRK14257 96 HVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF 175 (329)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC
Confidence 4999999999999999999999999999999999998631 01289999999998532 2356799999988766
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
..||+||+.|+....+.. ..+ ..+..+...++..+|.+..++.+++
T Consensus 176 -~~ti~eNi~~~~~~~~~~-~~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~~ 221 (329)
T PRK14257 176 -EMSIFDNVAYGPRNNGIN-DRK--------------------------------ILEKIVEKSLKSAALWDEVKDDLDK 221 (329)
T ss_pred -CCcHHHHHHhHHHhcCCC-hHH--------------------------------HHHHHHHHHHHHcCCcchhhhhhhC
Confidence 589999999875332110 000 0011234556777776555556654
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
....|||||||||+||||++.+|+||+|||||+|||+.+...+.++|+++.+ + .+|+.++|....+.+.+|+|++|
T Consensus 222 -~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driivl 297 (329)
T PRK14257 222 -AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVFF 297 (329)
T ss_pred -CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999998743 3 45666788888889999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 298 ~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 298 YQGWIEEAGETKTIF 312 (329)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999884
No 337
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=329.71 Aligned_cols=208 Identities=26% Similarity=0.350 Sum_probs=168.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCC-CCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1106)
++|+|||++|++|++++|+||||||||||+++|+|.++|+...+|+|+++|.++.... .++.++||+|++. .++.+
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 4999999999999999999999999999999999999987112399999999876432 2357999999864 67789
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
||+||+.|..+..+.. . .+....++.+++.+||.+..++. +
T Consensus 101 tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~-----~ 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP-R---------------------------------PEMIKIVRDVLADVGMLDYIDSE-----P 141 (282)
T ss_pred CHHHHHHhhHHhCCCC-H---------------------------------HHHHHHHHHHHHHCCChhHhcCC-----c
Confidence 9999998865332210 0 01122456778999998766654 4
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++....+.| |+.++|+..++ ..||++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-vli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLT-VISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999876533444 45566676776 579999999999
Q ss_pred eEEEEcChHHHHH
Q 001293 402 QIVYQGPRELVLE 414 (1106)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1106)
++++.|+++++..
T Consensus 220 ~i~~~g~~~~~~~ 232 (282)
T PRK13640 220 KLLAQGSPVEIFS 232 (282)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999988743
No 338
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=329.06 Aligned_cols=216 Identities=24% Similarity=0.294 Sum_probs=179.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++. ....+|+|+|++|++||+++|+||||||||||+++|+|... +..|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4789999887741 11358999999999999999999999999999999999876 4689999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..+++.++|++|++. +++..|+.+|+.|..... ....+...+.++++++.+++.+..+.. +..||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 235567999999974 567789999998864322 123344455678899999998776654 457999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 455 4999999986 68988
Q ss_pred ecCCC
Q 001293 1090 VGPLG 1094 (1106)
Q Consensus 1090 ~g~~g 1094 (1106)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 88854
No 339
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=320.07 Aligned_cols=205 Identities=28% Similarity=0.339 Sum_probs=171.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc-ccceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.... .++.++|++|++..++.+||+
T Consensus 14 ~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 14 VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 5999999999999999999999999999999999999998 999999999876533 246799999998888899999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.+.....+... + .....++.+++.+||++..++.+ ..|
T Consensus 91 ~nl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (232)
T cd03300 91 ENIAFGLRLKKLPK--A--------------------------------EIKERVAEALDLVQLEGYANRKP-----SQL 131 (232)
T ss_pred HHHHHHHHhcCCCH--H--------------------------------HHHHHHHHHHHHcCCchhhcCCh-----hhC
Confidence 99988754332100 0 01123567788999987776554 469
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....+.|+ +.++|+..++.+++|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~ti-ii~sh~~~~~~~~~d~i~~l~~G~~~ 210 (232)
T cd03300 132 SGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITF-VFVTHDQEEALTMSDRIAVMNKGKIQ 210 (232)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEE-EEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765334454 44677778889999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (232)
T cd03300 211 QIGTPEEIY 219 (232)
T ss_pred ecCCHHHHH
Confidence 999887663
No 340
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-35 Score=336.35 Aligned_cols=217 Identities=18% Similarity=0.190 Sum_probs=171.1
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCccCCCCcc-------cceEEEEcCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1106)
..+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|.++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 469999999999999999999999999999999999986311 128999999998765432 246999999864
Q ss_pred --CCCCCCHHHHHHHHHHhcCC-CchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 001293 237 --HIGEMTVRETLAFSARCQGV-GTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1106)
Q Consensus 237 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
+.+.+||.+++.+....... +... .. ..+....+.++|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~---~~--------------------------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW---QR--------------------------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc---cc--------------------------HHHHHHHHHHHHHHCCCCChHH
Confidence 67889999999864321100 0000 00 0001234567899999975321
Q ss_pred cccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001293 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1106)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1106)
+-++.+..|||||||||+||+||+.+|++|||||||+|||+.++.++++.|+++.. ..+.+|+.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCC
Confidence 11344567999999999999999999999999999999999999999999999765 334566678999999999999
Q ss_pred eEEEEcCCeEEEEcChHHHH
Q 001293 394 DIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1106)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998874
No 341
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=359.52 Aligned_cols=219 Identities=21% Similarity=0.312 Sum_probs=183.3
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|++++|+ +..+|+||||+|++|+++||+||||||||||+++|+|...+++.+|+|.++|.++.
T Consensus 6 l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 72 (506)
T PRK13549 6 LEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQ 72 (506)
T ss_pred EEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 78889988774 24699999999999999999999999999999999997654336899999998764
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~~----~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
.. ..++.+||++|++.+++.+||+||+.++...+.....+.+...+.++++++.+++.+..+.. +.+||||
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG 147 (506)
T PRK13549 73 ASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATP-----VGNLGLG 147 (506)
T ss_pred CCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccc-----hhhCCHH
Confidence 32 12456999999998888999999998865332111122333445688999999998777765 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||++||+||+.+|+||||||||+|||+.++..+++.|+++.++|.|||++|||++ ++.+.||++++|++ |++++.|
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~ 225 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTR 225 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeec
Confidence 999999999999999999999999999999999999999999877999999999987 57788999999986 5888888
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+.-
T Consensus 226 ~~~ 228 (506)
T PRK13549 226 PAA 228 (506)
T ss_pred ccc
Confidence 754
No 342
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=324.09 Aligned_cols=212 Identities=24% Similarity=0.288 Sum_probs=168.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCCc---ccceEEEEcCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGE 240 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 240 (1106)
++|+|+|++|++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 4999999999999999999999999999999999998741 012899999999875432 23679999999888999
Q ss_pred CCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 001293 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++.+..+..... .+....++.+++.+||.+..+.. -+..
T Consensus 97 ~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~~~ 143 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKSK--------------------------------KELQERVRWALEKAQLWDEVKDR-LDAP 143 (250)
T ss_pred CcHHHHHHHHHHhccccCCH--------------------------------HHHHHHHHHHHHHcCCCcchhhh-hcCC
Confidence 99999999875432110000 00112356678888885421111 1234
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++. .+ ++++.++|+..++.+.+|+|++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 55799999999999999999999999999999999999999999999874 24 4566677888888999999999999
Q ss_pred CeEEEEcChHHHH
Q 001293 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|++++.|+.+++.
T Consensus 221 G~i~~~g~~~~~~ 233 (250)
T PRK14247 221 GQIVEWGPTREVF 233 (250)
T ss_pred CeEEEECCHHHHH
Confidence 9999999998764
No 343
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.4e-35 Score=322.10 Aligned_cols=213 Identities=26% Similarity=0.384 Sum_probs=178.9
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
+++|+++.|+ ++.+|+|+|+++.+|++++|+|+||||||||+++|+|..+ +..|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 5677776664 2369999999999999999999999999999999999865 468999999987653
Q ss_pred c-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHH
Q 001293 937 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1015 (1106)
Q Consensus 937 ~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqr 1015 (1106)
. ..++.++|++|++.+++..|+.||+.+....+. .......+.++++++.+++.+..++. +..||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRY-----PNQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCC-----hhhCCHHHHHH
Confidence 2 234679999999988888999999987654321 22233345678899999998777665 35799999999
Q ss_pred HHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1016 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1016 l~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
++|||+|+.+|++++|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 216 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSPD 216 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999999999999999999998765 899999999986 57888999999986 5888888854
No 344
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-35 Score=334.39 Aligned_cols=224 Identities=18% Similarity=0.212 Sum_probs=179.5
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeeeEEEEc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 930 (1106)
..+.|+|+++.|+. +...+|+||||+|++|+++||+|+||||||||+++|+|.... .+..|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 46899999988752 123599999999999999999999999999999999997531 2458999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCC
Q 001293 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1106)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~ 1005 (1106)
|.++.. ..+++.++||||++.+++ .|++||+.|+..... ..+.+...+.++++++.++|.+-.+..++.. +
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~--~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNG--INDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcC--CChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 998742 235677999999998774 799999998643221 1112223344678889888753222223332 4
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+++.|+++++ ++|||++||++. .+.+.||++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 799999999987 47778999999986 6
Q ss_pred EEEEecCCCC
Q 001293 1086 QEIYVGPLGR 1095 (1106)
Q Consensus 1086 ~~~~~g~~g~ 1095 (1106)
+++..|+...
T Consensus 301 ~i~e~g~~~~ 310 (329)
T PRK14257 301 WIEEAGETKT 310 (329)
T ss_pred EEEEeCCHHH
Confidence 8999988653
No 345
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=331.45 Aligned_cols=218 Identities=24% Similarity=0.285 Sum_probs=179.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCe-eeeEEEEcCcc
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNITISGYP 933 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 933 (1106)
.++++|+++.++. ....+|+||||+|++|+++||+|+||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788999887741 12358999999999999999999999999999999999765311 13899999988
Q ss_pred CCc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 934 KKQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 934 ~~~---~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
... ...++.+||++|++. .++..||.||+.|....+ ....++..+.+.++++.++|.+..+.. +..||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 643 234567999999974 566789999998764322 233444556788999999998877765 46799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1088 (1106)
+|||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++ +.||++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999987 35 67999999986 5888
Q ss_pred EecCCC
Q 001293 1089 YVGPLG 1094 (1106)
Q Consensus 1089 ~~g~~g 1094 (1106)
+.|+..
T Consensus 223 ~~g~~~ 228 (282)
T PRK13640 223 AQGSPV 228 (282)
T ss_pred EeCCHH
Confidence 888753
No 346
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.5e-35 Score=319.15 Aligned_cols=196 Identities=26% Similarity=0.341 Sum_probs=166.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+|
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 14 TAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 5999999999999999999999999999999999999998 999999998765322 357999999988899999999
Q ss_pred HHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCC
Q 001293 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1106)
|+.+.....+.. ...+..+++.+||++..|..+ ..||
T Consensus 90 ~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~LS 126 (223)
T TIGR03740 90 NLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQFS 126 (223)
T ss_pred HHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhCC
Confidence 998765432100 012455778899987666544 4699
Q ss_pred hhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001293 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1106)
||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+.+ |+.++|+..++.+.+|+|++|++|++++
T Consensus 127 ~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~~g~i~~ 204 (223)
T TIGR03740 127 LGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGIT-VILSSHILSEVQQLADHIGIISEGVLGY 204 (223)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCE-EEEEcCCHHHHHHhcCEEEEEeCCEEEE
Confidence 9999999999999999999999999999999999999999998754 3444 5556777888999999999999999999
Q ss_pred EcChH
Q 001293 406 QGPRE 410 (1106)
Q Consensus 406 ~G~~~ 410 (1106)
.|++.
T Consensus 205 ~~~~~ 209 (223)
T TIGR03740 205 QGKIN 209 (223)
T ss_pred ecChh
Confidence 99865
No 347
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=335.77 Aligned_cols=225 Identities=16% Similarity=0.204 Sum_probs=177.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CeeeeEEEEcCcc
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNITISGYP 933 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~ 933 (1106)
+.++|++.+|+.. .+...+|+||||+|++||++||+|+||||||||+++|+|.... .+..|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788888777432 1235699999999999999999999999999999999997642 2467999999987
Q ss_pred CCcc---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCC---CChHHHHHHHHHHHHHcCCccccccccC
Q 001293 934 KKQE---T----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPE---VDSETRKMFIDEVMELVELNPLRQSLVG 1001 (1106)
Q Consensus 934 ~~~~---~----~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~---~~~~~~~~~v~~~l~~~~l~~~~~~~~g 1001 (1106)
+... . +++.++|++|++. +.+.+||.+++.+......... ......++.+.++++.++|.+..+....
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 6421 1 2347999999986 5678899999976422111000 1112334568899999999753221111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEE
Q 001293 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFL 1080 (1106)
Q Consensus 1002 ~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~ 1080 (1106)
. +.+|||||||||+|||||+.+|+||||||||+|||+.++..|++.|+++.++ |.|||++|||++ .+.+.+|++++
T Consensus 155 ~--p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~v 231 (330)
T PRK15093 155 F--PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINV 231 (330)
T ss_pred C--chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEE
Confidence 1 4679999999999999999999999999999999999999999999999764 899999999987 57789999999
Q ss_pred EecCCEEEEecCC
Q 001293 1081 MKRGGQEIYVGPL 1093 (1106)
Q Consensus 1081 l~~Gg~~~~~g~~ 1093 (1106)
|++ |++++.|+.
T Consensus 232 m~~-G~ive~g~~ 243 (330)
T PRK15093 232 LYC-GQTVETAPS 243 (330)
T ss_pred EEC-CEEEEECCH
Confidence 986 699999875
No 348
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=322.53 Aligned_cols=212 Identities=21% Similarity=0.287 Sum_probs=176.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++||++.|+. ...||||++++|+++||+|+||||||||+++|+|... +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~---------------~~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH---------------LPMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC---------------ccceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 567888887741 1238999999999999999999999999999999865 56899999998764
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 936 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 936 ~~-~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
.. ...+.++|++|++.+++.+|+.||+.+..... ... .+..+..++++++.+++.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 22457999999998888899999998753211 111 1233456889999999988777663 579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|++|||+|+.+|++|||||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998754 899999999987 57788999999986 688898875
Q ss_pred C
Q 001293 1094 G 1094 (1106)
Q Consensus 1094 g 1094 (1106)
.
T Consensus 215 ~ 215 (232)
T PRK10771 215 D 215 (232)
T ss_pred H
Confidence 4
No 349
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=328.54 Aligned_cols=219 Identities=26% Similarity=0.355 Sum_probs=176.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC------eeeeEEEE
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNITI 929 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~------~~~G~i~i 929 (1106)
++++|+++.++ ++.+|+|+||+|++|+++||+|+||||||||+++|+|..++. ...|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 46778876653 246999999999999999999999999999999999976531 12799999
Q ss_pred cCccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcC-CCCCChHHHHHHHHHHHHHcCCccccccccCCCCC
Q 001293 930 SGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRL-SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1106)
Q Consensus 930 ~g~~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~-~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~ 1005 (1106)
+|.+... ..+++.++|++|++..++.+|++||+.+...... ......+..++.++++++.+++.+..+.. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987542 2345668999999876666899999987532111 00111122345678899999998776654 4
Q ss_pred CCCCHHHHHHHHHHHHHh---------cCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhc
Q 001293 1006 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1075 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~---------~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~ 1075 (1106)
..||||||||++|||+|+ .+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.|
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998765 899999999987 577889
Q ss_pred CeEEEEecCCEEEEecCCC
Q 001293 1076 DELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1076 D~v~~l~~Gg~~~~~g~~g 1094 (1106)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999986 6888888754
No 350
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=328.25 Aligned_cols=216 Identities=22% Similarity=0.268 Sum_probs=176.1
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeeeEEEEc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 930 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 930 (1106)
..+.++|+++.++ ...+|+|+||+|++|+++||+|+||||||||+++|+|...+ .+..|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588999988774 24699999999999999999999999999999999997542 1368999999
Q ss_pred CccCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccC
Q 001293 931 GYPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVG 1001 (1106)
Q Consensus 931 g~~~~-----~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g 1001 (1106)
|.++. ...+++.++|++|++.+++ .||+||+.+....+. .. ...++.++++++.+++.. ..+..
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 151 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES-- 151 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC--
Confidence 98753 1234567999999998777 499999988754332 11 122345677888887742 22322
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEE
Q 001293 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1106)
Q Consensus 1002 ~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1081 (1106)
+..||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.||++++|
T Consensus 152 ---~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~i~~l 226 (269)
T PRK14259 152 ---GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK-KNFTIVIVTHNMQ-QAVRVSDMTAFF 226 (269)
T ss_pred ---cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 46799999999999999999999999999999999999999999999985 4799999999987 588899999999
Q ss_pred ec--------C--CEEEEecCCC
Q 001293 1082 KR--------G--GQEIYVGPLG 1094 (1106)
Q Consensus 1082 ~~--------G--g~~~~~g~~g 1094 (1106)
++ | |++++.|+.+
T Consensus 227 ~~~~~~~~~~g~~g~~~~~~~~~ 249 (269)
T PRK14259 227 NAEEVEGGSGGKVGYLVEFNETK 249 (269)
T ss_pred eccccccccccccceEEEeCCHH
Confidence 96 3 6789998864
No 351
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.5e-34 Score=362.03 Aligned_cols=212 Identities=25% Similarity=0.370 Sum_probs=177.4
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1106)
.+.++|+||+|+|+. +.++|+|+|++|+||+.+||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 471 ~~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~ 536 (708)
T TIGR01193 471 NGDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGF 536 (708)
T ss_pred CCcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCE
Confidence 357999999999852 2358999999999999999999999999999999999876 56899999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccc-------ccccCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGL 1002 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~g~ 1002 (1106)
++.+ ..+++.+|||+|++.+++ .|++||+.++. .++.+ ++.++++++..++.+.. |..+|.
T Consensus 537 ~i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~----~~~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e 607 (708)
T TIGR01193 537 SLKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGA----KENVS----QDEIWAACEIAEIKDDIENMPLGYQTELSE 607 (708)
T ss_pred EHHHcCHHHHHHheEEEecCceehh-HHHHHHHhccC----CCCCC----HHHHHHHHHHhCCHHHHHhcccccCcEecC
Confidence 8643 467789999999998875 59999998752 11222 23467788888776543 333444
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
++.+||||||||++|||||+++|+||+||||||+||+++++.|++.|++. +|+|+|++||+++ ..+.+|++++|+
T Consensus 608 -~G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~ 682 (708)
T TIGR01193 608 -EGSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLD 682 (708)
T ss_pred -CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEE
Confidence 34689999999999999999999999999999999999999999999985 5899999999986 567899999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++..|+-
T Consensus 683 ~-G~i~~~G~~ 692 (708)
T TIGR01193 683 H-GKIIEQGSH 692 (708)
T ss_pred C-CEEEEECCH
Confidence 6 689988873
No 352
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=324.35 Aligned_cols=212 Identities=21% Similarity=0.314 Sum_probs=167.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCC--CC---cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMD--EF---VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~--~~---~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|+++|+++. .. ..++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 4999999999999999999999999999999999999862 012899999999875 21 1235799999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++....+.....+ .....++.+++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSKK--------------------------------ELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCHH--------------------------------HHHHHHHHHHHHcCCccchhhhh-c
Confidence 99999999998754321100000 01123456677888743211111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + .+||.++|+..++.++||+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45566778888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 353
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=331.49 Aligned_cols=205 Identities=20% Similarity=0.292 Sum_probs=166.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCC----C----cccceEEEEcCCCC-
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----F----VPQRTAAYISQHDN- 236 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 236 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 4999999999999999999999999999999999999998 9999999988642 1 12457999999863
Q ss_pred CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-cccccc
Q 001293 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1106)
.+...||+||+.|+....+.. . + +....++.+++.++|+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~-~-~--------------------------------~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN-K-Q--------------------------------EAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC-H-H--------------------------------HHHHHHHHHHHHcCCChhHhcCC
Confidence 233569999999865322110 0 0 0112345678888995 455544
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++.++||+|
T Consensus 148 -----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 -----PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred -----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEE
Confidence 45699999999999999999999999999999999999999999999876533 445556788888899999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 354
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-35 Score=323.64 Aligned_cols=221 Identities=21% Similarity=0.275 Sum_probs=177.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CC-eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1106)
.+.++|+++.|+ +..+|+|+||+|++||++||+|+||||||||+++|+|..+ +. +..|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478899988774 2359999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
.++.. ..+++.++|++|++.+++.+|++||+.+...... .....+.++.++++++.+++.......... .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87632 2356779999999988888999999987643221 112233345678889999985421111111 246
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
.||+|||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ +.|||++||+++ ++.+.||++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999987 57789999999986 68
Q ss_pred EEEecCCC
Q 001293 1087 EIYVGPLG 1094 (1106)
Q Consensus 1087 ~~~~g~~g 1094 (1106)
++..|+..
T Consensus 225 i~~~~~~~ 232 (252)
T PRK14256 225 LVECGETK 232 (252)
T ss_pred EEEeCCHH
Confidence 98888853
No 355
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-35 Score=317.05 Aligned_cols=195 Identities=24% Similarity=0.365 Sum_probs=162.6
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHHHHHH
Q 001293 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1106)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999998 9999999998754432 367999999998899999999998
Q ss_pred HHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhh
Q 001293 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1106)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1106)
++...... .. . +.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~~-~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGLK-LT-----A----------------------------EDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred cccccccC-cc-----H----------------------------HHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 76421100 00 0 01123567888999987666554 4699999
Q ss_pred hHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEc
Q 001293 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1106)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1106)
|||++||++++.+|++++|||||+|||..++..+.+.|+++.... +.+|+.++|+..++.++||++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAET-KMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999999999999876433 445555788889999999999999999998764
No 356
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.8e-35 Score=316.33 Aligned_cols=189 Identities=23% Similarity=0.370 Sum_probs=161.3
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC---c----ccccceEEEEccCCCCC
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK---Q----ETFARISGYCEQNDIHS 953 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~q~~~~~ 953 (1106)
..+|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999876 46899999998742 1 12456799999999888
Q ss_pred CCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001293 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1106)
Q Consensus 954 ~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDE 1033 (1106)
+.+|++||+.+....+ ........+.++++++.+++.+..+.. +.+||+|||||++|||||+.+|++|||||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQK-----IYELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8899999999865432 122334455688999999998776665 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEE
Q 001293 1034 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1106)
Q Consensus 1034 PtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1081 (1106)
||+|||+.++..+.+.|+++.++|.|||++||++. ..+.||++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777999999999986 34689999875
No 357
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=3.2e-35 Score=320.83 Aligned_cols=201 Identities=29% Similarity=0.401 Sum_probs=167.9
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc--ccccceEEEEc-cCCCCCCC
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCE-QNDIHSPF 955 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-q~~~~~~~ 955 (1106)
+.+++|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+... ..+++.++|++ |.+.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34579999999999999999999999999999999999765 468999999976432 23456799997 55667788
Q ss_pred CCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCC
Q 001293 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1035 (1106)
Q Consensus 956 ~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPt 1035 (1106)
+|++|++.+....+. ...+...+.+.++++.+++.+..+.. +..||+|||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTP-----VRQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 999999987654322 22333445677899999998777665 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1036 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1036 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
+|||+.+++.+.+.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999998754 899999999987 57788999999986 5777654
No 358
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.3e-35 Score=288.46 Aligned_cols=197 Identities=26% Similarity=0.390 Sum_probs=170.3
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc-------cccceEEEEccCCC
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-------TFARISGYCEQNDI 951 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~gyv~q~~~ 951 (1106)
+...+|++|++.|++||.+||||||||||||||-+|+|+.. +.+|+|.+.|.++.+. -..+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 55789999999999999999999999999999999999877 4689999999986531 24578999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Q 001293 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1031 (1106)
Q Consensus 952 ~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illL 1031 (1106)
+.|++|..||+.....++.....+ ......+.|+.+||.+..+.. +.+|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~~~---~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESSAD---SRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcccc---HHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEec
Confidence 999999999999998887643222 233467889999998766554 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCeEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001293 1032 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1106)
Q Consensus 1032 DEPtsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1088 (1106)
||||-+||.++...|.+++-.+. +.|.|.|++||||. +...|||.+-|..| +++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~G-~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRSG-RLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeecc-eec
Confidence 99999999999999999998875 55999999999985 67889999999874 665
No 359
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-35 Score=293.44 Aligned_cols=205 Identities=27% Similarity=0.405 Sum_probs=176.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHH
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
..+|+|||+.|.+|+.++++||||||||||||+++|+.+|. .|+|.+||.++.. |...-|.|+|++.++|-+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 45999999999999999999999999999999999999998 9999999998764 334568999999999999999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
+|++|+.++.|.++. .| ..++...+...||.+..+. ++-+|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~-----~i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHK-----YIWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCccccccc-----ceEee
Confidence 999999999886431 12 2345677889999877664 45579
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc--CCe
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~ 402 (1106)
||||||||.|||||..+|+.|+||||+++||.-++.++.+.|-++.+..++. ++.++|+..|+.-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~-~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQ-VLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCe-EEEEeccHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999998887755544 5558899999999999999998 579
Q ss_pred EEEEcChHHHHH
Q 001293 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
|+..=+.+-...
T Consensus 213 vv~~~~~df~rR 224 (259)
T COG4525 213 VVERLPLDFARR 224 (259)
T ss_pred eeEecCCCHHHH
Confidence 998777664433
No 360
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=326.98 Aligned_cols=208 Identities=23% Similarity=0.342 Sum_probs=169.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|+..+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 5999999999999999999999999999999999999998 999999998865432 2357999999888889999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|.||+.++.... ... ... . . ......++.+++.+||++..++.++
T Consensus 102 v~e~l~~~~~~~-~~~-~~~--------------~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 146 (265)
T PRK10575 102 VRELVAIGRYPW-HGA-LGR--------------F-G-------------AADREKVEEAISLVGLKPLAHRLVD----- 146 (265)
T ss_pred HHHHHHhCcccc-ccc-ccC--------------C-C-------------HHHHHHHHHHHHHcCCHHHhcCCcc-----
Confidence 999998753110 000 000 0 0 0011235678889999876665554
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|++++...+ ++|+.++|+..++.+.+|+|++|++|+
T Consensus 147 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~-~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 147 SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERG-LTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 6999999999999999999999999999999999999999999998765334 445557788889999999999999999
Q ss_pred EEEEcChHHH
Q 001293 403 IVYQGPRELV 412 (1106)
Q Consensus 403 iv~~G~~~~~ 412 (1106)
+++.|+.+++
T Consensus 226 i~~~~~~~~~ 235 (265)
T PRK10575 226 MIAQGTPAEL 235 (265)
T ss_pred EEEecCHHHh
Confidence 9999998775
No 361
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.5e-35 Score=322.38 Aligned_cols=212 Identities=26% Similarity=0.331 Sum_probs=168.0
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCceeEEEEcCccCCCCcc----cceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|+.|++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|++.+++
T Consensus 14 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 14 EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 5999999999999999999999999999999999995 576 9999999998755432 234899999999999
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1106)
.+|++|++.+.......... .... ...+....++.+++.+||+ ...++.++
T Consensus 91 ~~t~~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~- 142 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSARG------------------EEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN- 142 (243)
T ss_pred CcCHHHHHHHHHHHhhcccc------------------cccc---------cHHHHHHHHHHHHHHcCCchhhcccccc-
Confidence 99999999886532110000 0000 0001123457788999997 34554432
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh-cCeEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL-FDDIIL 397 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~-~D~iil 397 (1106)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++... +|++++
T Consensus 143 ---~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i~~ 217 (243)
T TIGR01978 143 ---EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYVHV 217 (243)
T ss_pred ---cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeEEE
Confidence 14999999999999999999999999999999999999999999998753 34 4555577788888888 899999
Q ss_pred EcCCeEEEEcChHHHH
Q 001293 398 LSDGQIVYQGPRELVL 413 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1106)
|++|++++.|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 218 LLDGRIVKSGDVELAK 233 (243)
T ss_pred EeCCEEEEecCHHHhc
Confidence 9999999999988653
No 362
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-35 Score=326.56 Aligned_cols=208 Identities=24% Similarity=0.397 Sum_probs=170.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 21 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 97 (265)
T PRK10253 21 TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDIT 97 (265)
T ss_pred EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCc
Confidence 4999999999999999999999999999999999999998 9999999998754322 356999999988888999
Q ss_pred HHHHHHHHHHhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccc
Q 001293 243 VRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1106)
Q Consensus 243 V~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1106)
|+||+.++..-. ...... . +.....++.+++.+||++..++. +
T Consensus 98 v~~~~~~~~~~~~~~~~~~---~----------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (265)
T PRK10253 98 VQELVARGRYPHQPLFTRW---R----------------------------KEDEEAVTKAMQATGITHLADQS-----V 141 (265)
T ss_pred HHHHHHhCcccccccccCC---C----------------------------HHHHHHHHHHHHHcCCHHHhcCC-----c
Confidence 999998753100 000000 0 00112356788899998766654 4
Q ss_pred cCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCC
Q 001293 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1106)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1106)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|+|++|++|
T Consensus 142 ~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 142 DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALREG 220 (265)
T ss_pred ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999876432 445566778888999999999999999
Q ss_pred eEEEEcChHHHH
Q 001293 402 QIVYQGPRELVL 413 (1106)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1106)
++++.|+++++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 363
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-35 Score=362.78 Aligned_cols=256 Identities=23% Similarity=0.327 Sum_probs=194.0
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++.....+|+.++++.+++. . +....+.+...++++|+++.++.
T Consensus 284 ~~~~~~~~~ri~~~l~~~~~~-----~---~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 328 (544)
T TIGR01842 284 FSGARQAYKRLNELLANYPSR-----D---PAMPLPEPEGHLSVENVTIVPPG--------------------------- 328 (544)
T ss_pred HHHHHHHHHHHHHHHhCCccc-----c---CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 467888888888888665441 0 01112223456999999998732
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
.++++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||+++.+... ++.++||+|+
T Consensus 329 -----~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~ 400 (544)
T TIGR01842 329 -----GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQD 400 (544)
T ss_pred -----CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCC
Confidence 1134899999999999999999999999999999999999998 9999999999876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.+++ .|++||+.+... ....+.+.++++.. ..++.++ .|++..||
T Consensus 401 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~~---------------------------~~~~~i~--~l~~gl~t 446 (544)
T TIGR01842 401 VELFP-GTVAENIARFGE----NADPEKIIEAAKLA---------------------------GVHELIL--RLPDGYDT 446 (544)
T ss_pred ccccc-ccHHHHHhccCC----CCCHHHHHHHHHHh---------------------------ChHHHHH--hCcccccc
Confidence 86665 599999985421 11112122211110 1122333 35667789
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+ ..||||||||++||||++++|++++|||||||||+.++..+.+.|+++.. .++|+|++ +|+.. ..+.||+
T Consensus 447 ~~~~~g-~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~i-th~~~-~~~~~d~ 522 (544)
T TIGR01842 447 VIGPGG-ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVVI-THRPS-LLGCVDK 522 (544)
T ss_pred ccCCCc-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEEE-eCCHH-HHHhCCE
Confidence 998764 57999999999999999999999999999999999999999999987642 34565554 44443 5678999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|++++.|+++++.+
T Consensus 523 i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 523 ILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred EEEEECCEEEeeCCHHHHhh
Confidence 99999999999999988753
No 364
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-35 Score=340.57 Aligned_cols=195 Identities=24% Similarity=0.360 Sum_probs=168.5
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-------cccceEEEEcCCCCCCCCCC
Q 001293 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1106)
|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.++||+|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999886431 12467999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.|+.+.. ....++.+++.+||++..+..+ .
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999999864200 0113566788999987766554 4
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999886533 4556667888899999999999999999
Q ss_pred EEEEcChHHHH
Q 001293 403 IVYQGPRELVL 413 (1106)
Q Consensus 403 iv~~G~~~~~~ 413 (1106)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999884
No 365
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-35 Score=316.39 Aligned_cols=191 Identities=25% Similarity=0.385 Sum_probs=162.5
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc-------ccccceEEEEccCCCCCCCCCH
Q 001293 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1106)
Q Consensus 886 ~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~~tv 958 (1106)
|+||+|++ ++++|+|+||||||||+++|+|... +..|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999865 468999999977531 1245679999999988888999
Q ss_pred HHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001293 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1106)
Q Consensus 959 ~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgL 1038 (1106)
+||+.+..... .....++.+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 1223345678899999998766654 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
|+.+++.+.+.+++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999998765 899999999987 47788999999986 5777665
No 366
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.6e-35 Score=327.44 Aligned_cols=224 Identities=21% Similarity=0.261 Sum_probs=178.9
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++||+++|+.+... ...+..++|+|+||+|++|+++||+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~~~~~----~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTGW----FRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCCc----ccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 7889998877421100 00012469999999999999999999999999999999999876 46899999998764
Q ss_pred c---ccccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCC
Q 001293 936 Q---ETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LS 1009 (1106)
. ...++.++|++|++. +.+.+|+.+++.++...+. ........+.++++++.+++. ...+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 2 123456999999975 4577899999987654321 222334445678999999994 454543 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1088 (1106)
+|||||++||++|+.+|+||||||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.||++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998764 899999999987 57778999999986 6888
Q ss_pred EecCCC
Q 001293 1089 YVGPLG 1094 (1106)
Q Consensus 1089 ~~g~~g 1094 (1106)
+.|+..
T Consensus 230 ~~~~~~ 235 (267)
T PRK15112 230 ERGSTA 235 (267)
T ss_pred ecCCHH
Confidence 887743
No 367
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-35 Score=317.30 Aligned_cols=194 Identities=31% Similarity=0.459 Sum_probs=159.9
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCC-CCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 45999999999999999999999999999999999999998 999999998875432 2357999999864 4678
Q ss_pred CCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 001293 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
+||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999988653221100 001123566788899986666544
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++..+||+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998765 3 45566678888899999999999999
Q ss_pred Ce
Q 001293 401 GQ 402 (1106)
Q Consensus 401 G~ 402 (1106)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 368
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-35 Score=319.34 Aligned_cols=204 Identities=27% Similarity=0.422 Sum_probs=171.0
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHHH
Q 001293 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
+|+|+|++|+||++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765332 467999999988898999999
Q ss_pred HHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCC
Q 001293 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1106)
|+.++....+... .+....+.++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988653321100 001123456788899987776655 4699
Q ss_pred hhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001293 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1106)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|++++...+.| ++.++|+.+++.+.+|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~t-ili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVT-VLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999876533444 5556777888999999999999999999
Q ss_pred EcChHHHH
Q 001293 406 QGPRELVL 413 (1106)
Q Consensus 406 ~G~~~~~~ 413 (1106)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99988764
No 369
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-35 Score=319.61 Aligned_cols=200 Identities=27% Similarity=0.388 Sum_probs=170.8
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcc-cccceEEEEccCCCCCCCCCHHHH
Q 001293 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYES 961 (1106)
Q Consensus 883 ~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~~tv~e~ 961 (1106)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +..|+|.++|.+.... ..++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999765 5689999999876532 234579999999988888999999
Q ss_pred HHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHH
Q 001293 962 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1041 (1106)
Q Consensus 962 l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~ 1041 (1106)
+.+..... ........+.+.++++.++|.+..+.. +..||+|||||++|||||+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRK-----PETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcC-----cccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 122233445678899999998777765 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1042 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1042 ~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
++..+++.++++..+ |+|||++||++. ++.+.||++++|++ |++++.|+..
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 215 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKPE 215 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999998754 899999999986 57788999999986 5888888754
No 370
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=319.46 Aligned_cols=201 Identities=23% Similarity=0.400 Sum_probs=167.8
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHHHHHH
Q 001293 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1106)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999998 9999999998754322 357999999998999999999998
Q ss_pred HHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhh
Q 001293 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1106)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1106)
++... ..... . .....++.+++.+||++..++.+ ..|||||
T Consensus 94 ~~~~~-~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKLN-----A----------------------------AQREKLHAIARQMGIEDLLARLP-----GQLSGGQ 134 (232)
T ss_pred ccccc-ccCCC-----H----------------------------HHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHH
Confidence 75321 00000 0 01123567889999987777655 4699999
Q ss_pred hHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcC
Q 001293 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1106)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1106)
||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+..++.+++|++++|.+|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQ-LTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998765334 445557788888999999999999999999999
Q ss_pred hHHHH
Q 001293 409 RELVL 413 (1106)
Q Consensus 409 ~~~~~ 413 (1106)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88764
No 371
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-35 Score=323.19 Aligned_cols=216 Identities=26% Similarity=0.297 Sum_probs=174.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1106)
.+.++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|... + .+..|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 378899988774 2369999999999999999999999999999999999632 2 12479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ....+..++.+.++++.+++.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS--- 145 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC---
Confidence 87532 234567999999988776 899999988643321 1112233456778899988743 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14239 146 --ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 699999999987 5788899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |++++.|+..
T Consensus 222 ~-G~i~~~g~~~ 232 (252)
T PRK14239 222 D-GDLIEYNDTK 232 (252)
T ss_pred C-CEEEEeCCHH
Confidence 6 5888988864
No 372
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-35 Score=323.40 Aligned_cols=210 Identities=20% Similarity=0.293 Sum_probs=166.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 34 ~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 113 (267)
T PRK14237 34 EAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPF 113 (267)
T ss_pred eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCccc
Confidence 4999999999999999999999999999999999998631 01289999999987532 1245799999988777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ .||+||+.++.+..+.... ......+..+++.++|.++.++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~-~ 158 (267)
T PRK14237 114 A-KSIYENITFALERAGVKDK---------------------------------KVLDEIVETSLKQAALWDQVKDDL-H 158 (267)
T ss_pred c-ccHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhhh-c
Confidence 6 6999999987543211000 001123456788888864332222 3
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..++.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.++||++++|
T Consensus 159 ~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l 235 (267)
T PRK14237 159 KSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEEE
Confidence 4566899999999999999999999999999999999999999999999873 34 45566778888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 236 YLGDLIEYDKTRNIF 250 (267)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999998863
No 373
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=325.60 Aligned_cols=215 Identities=24% Similarity=0.317 Sum_probs=170.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc--------ccceEEEEcCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--------PQRTAAYISQHDNH 237 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~~ 237 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+...+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (262)
T PRK09984 18 QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNL 97 (262)
T ss_pred EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEcccccc
Confidence 4999999999999999999999999999999999999875223599999998864321 13569999999888
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.++...... ..... .+. ...+.+..++.+++.+||++..|..+
T Consensus 98 ~~~~tv~e~l~~~~~~~~~---------~~~~~--~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~- 150 (262)
T PRK09984 98 VNRLSVLENVLIGALGSTP---------FWRTC--FSW---------------FTREQKQRALQALTRVGMVHFAHQRV- 150 (262)
T ss_pred ccCCcHHHHHHhhhccccc---------chhhh--ccc---------------ccHHHHHHHHHHHHHcCCHHHHhCCc-
Confidence 9999999999876421100 00000 000 00011234677899999987666554
Q ss_pred cccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001293 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1106)
..|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+.. +++||.++|+..++.+++|+|++
T Consensus 151 ----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~~ 225 (262)
T PRK09984 151 ----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIVA 225 (262)
T ss_pred ----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEE
Confidence 4699999999999999999999999999999999999999999999886533 45566678888889999999999
Q ss_pred EcCCeEEEEcChHHH
Q 001293 398 LSDGQIVYQGPRELV 412 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~ 412 (1106)
|++|++++.|+++++
T Consensus 226 l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 226 LRQGHVFYDGSSQQF 240 (262)
T ss_pred EECCEEEEeCCHHHh
Confidence 999999999998764
No 374
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=322.39 Aligned_cols=215 Identities=21% Similarity=0.236 Sum_probs=175.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcCc
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1106)
+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 5 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~ 71 (251)
T PRK14270 5 MESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGK 71 (251)
T ss_pred EEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCE
Confidence 67888887763 246999999999999999999999999999999999975421 25799999998
Q ss_pred cCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCCC
Q 001293 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGLP 1003 (1106)
Q Consensus 933 ~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~~ 1003 (1106)
++.. ...++.++|++|++.+++ .|++||+.|....... ...+.....++++++.+++.+ ..+..
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 144 (251)
T PRK14270 72 NIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS---- 144 (251)
T ss_pred ecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC----
Confidence 7632 134567999999988877 8999999886543211 122334456788999998743 22322
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
+..||+|||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++
T Consensus 145 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~~ 221 (251)
T PRK14270 145 -ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFLM 221 (251)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999876 699999999987 57888999999986
Q ss_pred CCEEEEecCCC
Q 001293 1084 GGQEIYVGPLG 1094 (1106)
Q Consensus 1084 Gg~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 222 -G~i~~~~~~~ 231 (251)
T PRK14270 222 -GDLIEFNKTE 231 (251)
T ss_pred -CeEEEeCCHH
Confidence 5888988854
No 375
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.1e-35 Score=318.92 Aligned_cols=205 Identities=27% Similarity=0.410 Sum_probs=170.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-cceEEEEcCCCCCCCCCCHH
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1106)
++|+|+|+++.+|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 5999999999999999999999999999999999999988 9999999998765433 36799999998888899999
Q ss_pred HHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCC
Q 001293 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1106)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1106)
||+.+.....+... . .....++++++.+++....++.+ +.|
T Consensus 91 enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHPK--A--------------------------------KIKARVEELLELVQLEGLGDRYP-----NQL 131 (237)
T ss_pred HHHHhHHHhcCCCH--H--------------------------------HHHHHHHHHHHHcCCHhHhhCCh-----hhC
Confidence 99988754321100 0 00113466788899976666544 469
Q ss_pred ChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEE
Q 001293 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1106)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1106)
|||||||++||++++.+|++++|||||+|||..+...+.+.|+++.. ..+.+|+.++|...++.+++|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998754 32344445677778889999999999999999
Q ss_pred EEcChHHHH
Q 001293 405 YQGPRELVL 413 (1106)
Q Consensus 405 ~~G~~~~~~ 413 (1106)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999988764
No 376
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-35 Score=324.45 Aligned_cols=208 Identities=22% Similarity=0.310 Sum_probs=166.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC-----CCCceeEEEEcCccCCCC-----cccceEEEEcCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP-----TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~-----~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1106)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++| + +|+|+++|+++... ..++.++|++|++
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 109 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRV---TGKITLDGEDIYDPRLDVVELRARVGMVFQKP 109 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---ceEEEECCEECcccccchHHHhhceEEEecCC
Confidence 499999999999999999999999999999999999874 5 89999999887531 1245799999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+++ .||+||+.|+....+..... .+....++.+++.+||.+.....
T Consensus 110 ~~~~-~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 156 (267)
T PRK14235 110 NPFP-KSIYENVAYGPRIHGLARSK--------------------------------AELDEIVETSLRKAGLWEEVKDR 156 (267)
T ss_pred CCCC-CcHHHHHHHHHHhcccccch--------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 49999999875432210000 00112356678888886422111
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
. +..++.|||||||||+|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ + .+|+.++|+..++.+++|++
T Consensus 157 ~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v 232 (267)
T PRK14235 157 L-HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRT 232 (267)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEE
Confidence 1 233567999999999999999999999999999999999999999999998743 3 45555778888899999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|+++.+|+.+++.
T Consensus 233 ~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 233 AFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 377
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-35 Score=323.44 Aligned_cols=226 Identities=18% Similarity=0.247 Sum_probs=177.6
Q ss_pred CCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHH
Q 001293 113 DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKT 192 (1106)
Q Consensus 113 ~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKS 192 (1106)
+.|...++++|+++.+. ..++|+|+|++|++|++++|+||||||||
T Consensus 8 ~~~~~~l~~~~l~~~~~----------------------------------~~~il~~isl~i~~Ge~~~i~G~nGsGKS 53 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYG----------------------------------KFHALKNINLDIAKNQVTAFIGPSGCGKS 53 (260)
T ss_pred cCCCceEEEEEEEEEeC----------------------------------CeEEeeceeEEEcCCCEEEEECCCCCCHH
Confidence 45667789999998762 12499999999999999999999999999
Q ss_pred HHHHHHhCCCC-----CCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCCCCCCHHHHHHHHHHhcCCCchhhh
Q 001293 193 TLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEM 262 (1106)
Q Consensus 193 TLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~ 262 (1106)
||+++|+|.++ |+ +|+|.++|.++... ..++.++|++|++.+++ +||+||+.++......... +
T Consensus 54 TLl~~l~Gl~~~~p~~p~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~-~- 127 (260)
T PRK10744 54 TLLRTFNRMYELYPEQRA---EGEILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEKLSR-A- 127 (260)
T ss_pred HHHHHHhcccccCCCCCc---ceEEEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCCCCH-H-
Confidence 99999999986 34 89999999887421 12467999999887776 8999999887543210000 0
Q ss_pred hHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChhhhHHHHHHHHHhcCC
Q 001293 263 LTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPA 342 (1106)
Q Consensus 263 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p 342 (1106)
+....++.+++.+||........ +.....||||||||++||+||+.+|
T Consensus 128 -------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p 175 (260)
T PRK10744 128 -------------------------------EMDERVEWALTKAALWNEVKDKL-HQSGYSLSGGQQQRLCIARGIAIRP 175 (260)
T ss_pred -------------------------------HHHHHHHHHHHHcCCChhhHHHH-hcCCCCCCHHHHHHHHHHHHHHCCC
Confidence 01123556788888742111111 2334579999999999999999999
Q ss_pred ccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEcChHHHH
Q 001293 343 LALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 343 ~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1106)
++|+|||||+|||+.++..+.+.|+++. .+ ++||.++|+..++.+++|++++|++|+++..|+.+++.
T Consensus 176 ~lllLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 176 EVLLLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred CEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999874 34 45566778888888999999999999999999988764
No 378
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-35 Score=327.57 Aligned_cols=216 Identities=24% Similarity=0.303 Sum_probs=179.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++.. ....+|+||||++++||++||+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 37889998887521 12358999999999999999999999999999999999876 5689999999876
Q ss_pred Cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~-~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..+++.+||++|++. .++..||.||+.++.... ....+...+.++++++.++|.++.+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234677999999974 566789999998764322 123334445678999999998877664 457999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++|||||+.+|+||||||||+|||+.++..+++.++++.++ |+|||++||+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 9999999999873 5 46999999987 57888
Q ss_pred ecCC
Q 001293 1090 VGPL 1093 (1106)
Q Consensus 1090 ~g~~ 1093 (1106)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8874
No 379
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-35 Score=323.35 Aligned_cols=222 Identities=20% Similarity=0.258 Sum_probs=178.1
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1106)
.++++|+++.++ +..+|+|+||++++|+++||+|+||||||||+++|+|...+. ...|.|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478999988874 235899999999999999999999999999999999976531 1369999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
.++.. ..+++.++|++|++.+++ .|++||+.+....... ....+..+.+.++++.+++.+..+..... .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87521 234567999999988777 8999999876432211 12223345678899999885422211111 146
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecC-
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1084 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~G- 1084 (1106)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++. .|+|||++||+++ ++.+.||++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999864 4899999999997 588899999999974
Q ss_pred ---CEEEEecCCC
Q 001293 1085 ---GQEIYVGPLG 1094 (1106)
Q Consensus 1085 ---g~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 229 ~~~G~i~~~~~~~ 241 (261)
T PRK14258 229 NRIGQLVEFGLTK 241 (261)
T ss_pred CcCceEEEeCCHH
Confidence 7999998853
No 380
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-35 Score=293.66 Aligned_cols=201 Identities=26% Similarity=0.397 Sum_probs=177.1
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCCCCCCHHH
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYE 960 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv~e 960 (1106)
..+|+|+|++|.+||.++++||||||||||||+++|..+ +..|.|.+||.++.-..- .-|.|+|++.+.|.+++.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 358999999999999999999999999999999999887 578999999998754322 2488999999999999999
Q ss_pred HHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCH
Q 001293 961 SLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1040 (1106)
Q Consensus 961 ~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~ 1040 (1106)
|+.|+..++. +++.++.+.+.+.+..++|.+..++. +-+||||||||+.|||||+.+|+.|+||||++.||+
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999998875 56788888999999999999888766 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hCCCeEEEEecCccHHHHHhcCeEEEEecC-CEEEEecCCC
Q 001293 1041 RAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG-GQEIYVGPLG 1094 (1106)
Q Consensus 1041 ~~~~~i~~~l~~~~-~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G-g~~~~~g~~g 1094 (1106)
-+++.++++|-++. .+|+.++++||+.+ +..-.++++++|..| |+++..=+++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999998875 56999999999986 455567999999843 5787776665
No 381
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.7e-35 Score=314.72 Aligned_cols=199 Identities=21% Similarity=0.337 Sum_probs=164.8
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc-ccceEEEEcCCCCCCCCCCHHH
Q 001293 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVRE 245 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1106)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 357999999999999999999999999999999999998 999999999875432 2467999999998999999999
Q ss_pred HHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCC
Q 001293 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1106)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1106)
|+.+...... ... . .....++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN-----A----------------------------EQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc-----H----------------------------HHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987542110 000 0 00123466788999987666544 4699
Q ss_pred hhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEE
Q 001293 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1106)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1106)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..+++|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999998764 334555667888888899999999999999998
Q ss_pred EcC
Q 001293 406 QGP 408 (1106)
Q Consensus 406 ~G~ 408 (1106)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 382
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-35 Score=321.69 Aligned_cols=215 Identities=21% Similarity=0.290 Sum_probs=174.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1106)
.+.++||++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..... +..|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 477889988764 135899999999999999999999999999999999964311 2579999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.++++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 143 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS--- 143 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC---
Confidence 87642 234567999999988777 8999999987543221 122334456788888888743 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||++||+++ ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14240 144 --ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL 219 (250)
T ss_pred --CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999985 4899999999986 5788899999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |++++.|+.
T Consensus 220 ~-G~i~~~~~~ 229 (250)
T PRK14240 220 N-GEIVEFGDT 229 (250)
T ss_pred C-CEEEEeCCH
Confidence 7 588888864
No 383
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.5e-35 Score=324.78 Aligned_cols=207 Identities=22% Similarity=0.258 Sum_probs=169.1
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCC--CCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN--HIG 239 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 45999999999999999999999999999999999999998 9999999988753221 246999999864 567
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGD 318 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1106)
.+||.+++.+..+....... .+....++.+++.+||. ...++.
T Consensus 103 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 146 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLEP---------------------------------EQREKQIIETLRQVGLLPDHASYY--- 146 (267)
T ss_pred chhHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCChHHHhcC---
Confidence 88999999886543210000 00112356788999994 555544
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+..|||||||||+||++|+.+|++|||||||+|||+.+...+.+.|+++.+.. +++|+.++|+..++..+||++++|
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 147 --PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred --chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 34699999999999999999999999999999999999999999999876533 445555788888999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 384
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.8e-35 Score=325.20 Aligned_cols=205 Identities=23% Similarity=0.290 Sum_probs=168.6
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCC-CCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGE 240 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1106)
..+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35999999999999999999999999999999999999998 999999998875422 2467999999863 6778
Q ss_pred CCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccc
Q 001293 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1106)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1106)
.||.||+.++....+.. + + +....++.+++.+||.+..++.
T Consensus 97 ~tv~eni~~~~~~~~~~-~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~----- 137 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R-E--------------------------------EMIKRVDEALLAVNMLDFKTRE----- 137 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H-H--------------------------------HHHHHHHHHHHHCCCHhHhhCC-----
Confidence 99999998865322110 0 0 0112356778889998766654
Q ss_pred ccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcC
Q 001293 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1106)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1106)
+..|||||||||+|||||+.+|+++||||||+|||+.++..+.+.|+++....+.| |+.++|+..++. .+|+|++|++
T Consensus 138 ~~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-iil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 138 PARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLT-VLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHH-hCCEEEEEEC
Confidence 45699999999999999999999999999999999999999999999876532444 555777777775 6999999999
Q ss_pred CeEEEEcChHHHH
Q 001293 401 GQIVYQGPRELVL 413 (1106)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1106)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998874
No 385
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-35 Score=324.12 Aligned_cols=207 Identities=27% Similarity=0.406 Sum_probs=169.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|+++|+ +|+|.++|+++.... .++.++|++|+..+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (255)
T PRK11231 16 RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGIT 92 (255)
T ss_pred EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCcc
Confidence 5999999999999999999999999999999999999988 999999998765432 2356999999988888899
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.++..... ...... .......++.+++.+||++..++.+ .
T Consensus 93 v~~~i~~~~~~~~--~~~~~~----------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 137 (255)
T PRK11231 93 VRELVAYGRSPWL--SLWGRL----------------------------SAEDNARVNQAMEQTRINHLADRRL-----T 137 (255)
T ss_pred HHHHHHhccchhh--hhccCC----------------------------CHHHHHHHHHHHHHcCCHHHHcCCc-----c
Confidence 9999988531000 000000 0001123567788899987666554 4
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+||+|++.+|++|+|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+++|++++|++|+
T Consensus 138 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 138 DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 6999999999999999999999999999999999999999999998754 3 4455567788889999999999999999
Q ss_pred EEEEcChHHH
Q 001293 403 IVYQGPRELV 412 (1106)
Q Consensus 403 iv~~G~~~~~ 412 (1106)
+++.|+.+++
T Consensus 216 i~~~~~~~~~ 225 (255)
T PRK11231 216 VMAQGTPEEV 225 (255)
T ss_pred EEEEcCHHHh
Confidence 9999998876
No 386
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-35 Score=322.10 Aligned_cols=218 Identities=18% Similarity=0.237 Sum_probs=173.1
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcCcc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGYP 933 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~~ 933 (1106)
+++|+++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|..... +..|+|.++|.+
T Consensus 7 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 73 (251)
T PRK14244 7 SVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID 73 (251)
T ss_pred EeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe
Confidence 4677776653 246999999999999999999999999999999999975411 358999999987
Q ss_pred CCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCC
Q 001293 934 KKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 1008 (1106)
Q Consensus 934 ~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~L 1008 (1106)
+.. ..+++.++|++|++.+++. |++||+.+....+.. ....+..+..++++++.+++.+........ .+.+|
T Consensus 74 i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~L 150 (251)
T PRK14244 74 VYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFEL 150 (251)
T ss_pred hHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhC
Confidence 532 1345679999999887775 999999886433221 112233445678899999986521111111 14579
Q ss_pred CHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEE
Q 001293 1009 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1088 (1106)
Q Consensus 1009 SgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~ 1088 (1106)
|||||||++|||+|+.+|+||||||||+|||+.++..+.+.|+++. +|+|||++||+++ ++.+.||++++|++ |+++
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~ 227 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIV 227 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999985 4899999999987 57788999999987 5888
Q ss_pred EecCC
Q 001293 1089 YVGPL 1093 (1106)
Q Consensus 1089 ~~g~~ 1093 (1106)
+.|+.
T Consensus 228 ~~~~~ 232 (251)
T PRK14244 228 EYNTT 232 (251)
T ss_pred EeCCH
Confidence 88874
No 387
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-35 Score=323.29 Aligned_cols=220 Identities=19% Similarity=0.249 Sum_probs=175.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CC-eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 931 (1106)
.+.++|+++.|+ .+.+|+|+||+|++||++||+|+||||||||+++|+|... +. +..|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 378899988764 2369999999999999999999999999999999999754 11 1479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
.++.. ...++.+||++|++.+++. |++||+.|....+. ....++..+.++++++.+++.+........ .+.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~-~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHT-QAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87632 2345679999999888775 99999988643321 112233345577889998885421111111 146
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
+||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999864 799999999987 57889999999986 68
Q ss_pred EEEecCCC
Q 001293 1087 EIYVGPLG 1094 (1106)
Q Consensus 1087 ~~~~g~~g 1094 (1106)
++..|+..
T Consensus 232 i~~~g~~~ 239 (259)
T PRK14274 232 LVECNDTN 239 (259)
T ss_pred EEEECCHH
Confidence 98888854
No 388
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-35 Score=323.32 Aligned_cols=217 Identities=21% Similarity=0.283 Sum_probs=177.3
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-e--eeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 931 (1106)
.+.++|+++.|+ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. + ..|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478899988774 235899999999999999999999999999999999975432 2 479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++ .|++||+.+....+. ..+....++.+.++++.+++.+ ..+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999987654332 1122333456778899888742 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 467999999999999999999999999999999999999999999999865 699999999997 5888999999998
Q ss_pred c----CCEEEEecCCC
Q 001293 1083 R----GGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~----Gg~~~~~g~~g 1094 (1106)
. .|++++.|+..
T Consensus 224 ~~~~~~G~i~~~~~~~ 239 (259)
T PRK14260 224 TDESRIGQMVEFGVTT 239 (259)
T ss_pred ccCCCCceEEEeCCHH
Confidence 4 47999998854
No 389
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=4e-35 Score=337.80 Aligned_cols=194 Identities=23% Similarity=0.376 Sum_probs=168.0
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc-------ccccceEEEEccCCCCCCCCCH
Q 001293 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1106)
Q Consensus 886 ~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~~tv 958 (1106)
|+||+|++|++++|+||||||||||+++|+|... +..|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 9999999999999999999999999999999876 468999999987532 1345679999999999999999
Q ss_pred HHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001293 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1106)
Q Consensus 959 ~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgL 1038 (1106)
+||+.|+.... .....++.++++++.++|.++.++. +.+||||||||++|||||+.+|++|||||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRL-----PGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 1223345678999999998877765 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |++++.|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999998765 899999999987 57888999999986 588888874
No 390
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.2e-35 Score=309.99 Aligned_cols=190 Identities=49% Similarity=0.849 Sum_probs=161.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCeeeeEEEEcCc
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNITISGY 932 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 932 (1106)
.+.++|+++.|+.... .....+|+|+|+++++|++++|+|+||||||||+++|+|.. . +..|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 4778999888752100 01246999999999999999999999999999999999976 5 56899999998
Q ss_pred cCCcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 933 PKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 933 ~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
+......++.++|++|++.+++.+|++||+.+..... .||+||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445678999999998888899999997642100 399999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
|||++|||||+.+|++++|||||+|||+.+++.+.+.|+++.++|+|||+++|+++.++.+.||++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998777999999999986457788999999986 5777764
No 391
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=3.4e-35 Score=319.53 Aligned_cols=207 Identities=24% Similarity=0.302 Sum_probs=167.2
Q ss_pred eeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC----CCCceeEEEEcCccCCCCccc-ceEEEEcCCCC--CCC
Q 001293 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDN--HIG 239 (1106)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~--~~~ 239 (1106)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++.....+ +.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999988 6 99999999987544332 57999999874 556
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.+|+.|++.+.....+... .+....++.+++.+||++.. ...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~--~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPE--EVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchH--HHHhC
Confidence 7899999987643221100 00112356788999997320 11123
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
.+..|||||||||+||++++.+|++|+|||||+|||+.+...+.+.|+++.+ ..+++|+.++|+..++..++|++++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4457999999999999999999999999999999999999999999998764 334455567788889999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|+++..|+++++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988774
No 392
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-35 Score=321.48 Aligned_cols=218 Identities=23% Similarity=0.317 Sum_probs=174.7
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcCc
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 932 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 932 (1106)
++++|+++.++ +..+|+|+||+|++||+++|+|+||||||||+++|+|...+. +..|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887764 236899999999999999999999999999999999975421 25899999998
Q ss_pred cCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 001293 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1106)
Q Consensus 933 ~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~ 1007 (1106)
++.. ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+..... .+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNK-PGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhC-Chhh
Confidence 7542 234567999999988877 899999988653321 112223345578889998885421111111 1467
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
||+|||||++|||||+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999864 799999999987 57888999999987 588
Q ss_pred EEecCC
Q 001293 1088 IYVGPL 1093 (1106)
Q Consensus 1088 ~~~g~~ 1093 (1106)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 888874
No 393
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-35 Score=337.22 Aligned_cols=190 Identities=23% Similarity=0.379 Sum_probs=166.3
Q ss_pred eeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc-------ccccceEEEEccCCCCCCCCCH
Q 001293 886 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 958 (1106)
Q Consensus 886 ~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~~tv 958 (1106)
|+||+|++|++++|+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 468999999977532 2245789999999999999999
Q ss_pred HHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001293 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1106)
Q Consensus 959 ~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgL 1038 (1106)
+||+.|+.. ...++.++++++.++|.++.+.. +.+||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRY-----PGSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988632 11234578899999998877765 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1039 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999998765 899999999987 68889999999986 588888874
No 394
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=7.3e-35 Score=322.54 Aligned_cols=216 Identities=24% Similarity=0.256 Sum_probs=175.3
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc-
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 933 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 933 (1106)
.+.++|+++.++ ++.+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 378899988774 1359999999999999999999999999999999999865 468999999987
Q ss_pred ----CCcc---c----ccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-ccccc
Q 001293 934 ----KKQE---T----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSL 999 (1106)
Q Consensus 934 ----~~~~---~----~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~ 999 (1106)
+... . .++.++|++|++. +.+.+|+.||+.+...... ..........+.++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346999999974 4567899999876432211 1112233456788999999863 44443
Q ss_pred cCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeE
Q 001293 1000 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1078 (1106)
Q Consensus 1000 ~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v 1078 (1106)
+..||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.++ |.|||++||+++ .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4679999999999999999999999999999999999999999999998764 899999999987 477789999
Q ss_pred EEEecCCEEEEecCCC
Q 001293 1079 FLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1079 ~~l~~Gg~~~~~g~~g 1094 (1106)
++|++ |++++.|+..
T Consensus 223 ~~l~~-g~i~~~~~~~ 237 (258)
T PRK11701 223 LVMKQ-GRVVESGLTD 237 (258)
T ss_pred EEEEC-CEEEEeCCHH
Confidence 99986 6899988753
No 395
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=2.8e-35 Score=316.64 Aligned_cols=194 Identities=23% Similarity=0.385 Sum_probs=160.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGE 240 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~ 240 (1106)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.
T Consensus 14 ~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 14 HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 4999999999999999999999999999999999999998 99999999887421 124679999999888889
Q ss_pred CCHHHHHHHHHH-hcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
+||+||+.++.. .++.. . .+....++.+++.+||++..++.+
T Consensus 91 ~t~~e~l~~~~~~~~~~~------~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 133 (213)
T cd03262 91 LTVLENITLAPIKVKGMS------K----------------------------AEAEERALELLEKVGLADKADAYP--- 133 (213)
T ss_pred CcHHHHHHhHHHHhcCCC------H----------------------------HHHHHHHHHHHHHcCCHhHhhhCc---
Confidence 999999988642 11100 0 001123466788899987666544
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+ ++|+.++|+..++.+++|+|++|+
T Consensus 134 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d~i~~l~ 209 (213)
T cd03262 134 --AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVADRVIFMD 209 (213)
T ss_pred --cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998764 34 445557888889999999999999
Q ss_pred CCeE
Q 001293 400 DGQI 403 (1106)
Q Consensus 400 ~G~i 403 (1106)
+|++
T Consensus 210 ~g~i 213 (213)
T cd03262 210 DGRI 213 (213)
T ss_pred CCcC
Confidence 9974
No 396
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.7e-35 Score=316.28 Aligned_cols=209 Identities=23% Similarity=0.344 Sum_probs=174.2
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.+... .+...+|+|+||++++|+++||+|+||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888776310 012579999999999999999999999999999999999765 56899999998764
Q ss_pred cc------cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 936 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.. ..++.++|++|++.+++.+|+.||+.+...... ....++....+.++++.+++.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 21 245789999999988888999999998654321 123344456688999999998776665 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
+|||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ +|+|||+++|+++ +.+.||++++|++|
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~g 217 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMEDG 217 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999875 5899999999985 46789999999865
No 397
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.5e-35 Score=323.12 Aligned_cols=207 Identities=29% Similarity=0.426 Sum_probs=169.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 15 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (256)
T TIGR03873 15 LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLT 91 (256)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 346999999987788899
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.++..... ... . .+ ..+....++.+++.+||.+..++.+ .
T Consensus 92 v~e~l~~~~~~~~---------~~~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 136 (256)
T TIGR03873 92 VRDVVALGRIPHR---------SLW------A-GD--------------SPHDAAVVDRALARTELSHLADRDM-----S 136 (256)
T ss_pred HHHHHHhcchhhh---------hhc------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc-----c
Confidence 9999988531000 000 0 00 0001123567788999976666554 4
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+++|+|++|++|+
T Consensus 137 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 137 TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 6999999999999999999999999999999999999999999998753 3 4456667888889999999999999999
Q ss_pred EEEEcChHHH
Q 001293 403 IVYQGPRELV 412 (1106)
Q Consensus 403 iv~~G~~~~~ 412 (1106)
+++.|+.+++
T Consensus 215 i~~~g~~~~~ 224 (256)
T TIGR03873 215 VVAAGPPREV 224 (256)
T ss_pred EEEecCHHHh
Confidence 9999998875
No 398
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=4.2e-35 Score=337.65 Aligned_cols=199 Identities=25% Similarity=0.413 Sum_probs=169.2
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-------cccceEEEEcCCCCCCCCCC
Q 001293 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1106)
|+|+.+++|++++|+|||||||||||++|+|+++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999998 99999999887432 12467999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.|+.+... . . +....++++++.+||++..++.+ .
T Consensus 92 v~enl~~~~~~~~--~-----~-----------------------------~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P-----S-----------------------------ERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h-----h-----------------------------HHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998753210 0 0 01123567889999987776554 4
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999886533 4455567888899999999999999999
Q ss_pred EEEEcChHHHH
Q 001293 403 IVYQGPRELVL 413 (1106)
Q Consensus 403 iv~~G~~~~~~ 413 (1106)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999998874
No 399
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.3e-35 Score=317.23 Aligned_cols=200 Identities=28% Similarity=0.440 Sum_probs=160.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCC--CCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHI--GEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1106)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 35999999999999999999999999999999999999998 999999998764 2346799999987653 3489
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.++...... ...... ......++.+++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~~--~~~~~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRRLS----------------------------KADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhccccccc--cccCCC----------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 99999886421100 000000 001123567888999987666554 4
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++||.++|+..++.+++|+|++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999998764 3 445666788888999999999999886
Q ss_pred EEEEc
Q 001293 403 IVYQG 407 (1106)
Q Consensus 403 iv~~G 407 (1106)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 400
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-36 Score=330.71 Aligned_cols=251 Identities=24% Similarity=0.342 Sum_probs=195.4
Q ss_pred HHHHhhhccccchHHHHHHHHHHHhhcCCC-CCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhcCCcc
Q 001293 84 LIDKLVKVTDVDNERFLLKLKNRIDRVGID-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKK 162 (1106)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~ 162 (1106)
-+|+.+...+...+ ..++.+...+. .....|.|+|+++.+++
T Consensus 232 dme~mfdLl~~~~~-----v~d~pda~~L~~~~~g~v~F~~V~F~y~~-------------------------------- 274 (497)
T COG5265 232 DMEKMFDLLDVEAE-----VSDAPDAPPLWPVRLGAVAFINVSFAYDP-------------------------------- 274 (497)
T ss_pred hHHHHHHhhccchh-----hccCCCCccccccccceEEEEEEEeeccc--------------------------------
Confidence 34444444444443 34444433333 33566999999999853
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCCCCC
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 239 (1106)
.+++|+|+|+.+++|++++++||+|+||||++++|-++++++ +|.|+++|+++.... .++.+|.|||+.+ ++
T Consensus 275 -~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~---sG~I~id~qdir~vtq~slR~aIg~VPQDtv-LF 349 (497)
T COG5265 275 -RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVN---SGSITIDGQDIRDVTQQSLRRAIGIVPQDTV-LF 349 (497)
T ss_pred -cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCc---CceEEEcchhHHHhHHHHHHHHhCcCcccce-eh
Confidence 235999999999999999999999999999999999999999 999999999986543 3578999999654 45
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
+.|+..|+.|+. +....+....+++..+. ... +-.|++.+||.||++
T Consensus 350 NDti~yni~ygr----~~at~eev~aaa~~aqi---------------------------~~f--i~~lP~gy~t~Vger 396 (497)
T COG5265 350 NDTIAYNIKYGR----PDATAEEVGAAAEAAQI---------------------------HDF--IQSLPEGYDTGVGER 396 (497)
T ss_pred hhhHHHHHhccC----ccccHHHHHHHHHHhhh---------------------------hHH--HHhCchhhhcccchh
Confidence 679999999874 22222222222222111 111 235899999999999
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
+.+ |||||||||+|||+++.+|+||++||.||+||+.|.++|...|+..+ .++|+++.. |+..+.--+|.|++|+
T Consensus 397 glk-lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~--~~rttlvia--hrlsti~~adeiivl~ 471 (497)
T COG5265 397 GLK-LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVS--AGRTTLVIA--HRLSTIIDADEIIVLD 471 (497)
T ss_pred eee-ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh--CCCeEEEEe--ehhhhccCCceEEEee
Confidence 997 99999999999999999999999999999999999999999999876 345555533 3567777899999999
Q ss_pred CCeEEEEcChHHHHH
Q 001293 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|+|++.|++++++.
T Consensus 472 ~g~i~erg~h~~ll~ 486 (497)
T COG5265 472 NGRIVERGTHEELLA 486 (497)
T ss_pred CCEEEecCcHHHHHH
Confidence 999999999999876
No 401
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.9e-35 Score=365.15 Aligned_cols=210 Identities=24% Similarity=0.401 Sum_probs=175.8
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
..++|+||+|+++ ++.++|+|+|++|+||+++||+|+||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 4699999986543 1246899999999999999999999999999999999976 3 48999999988
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccc-------ccccCCC
Q 001293 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 1003 (1106)
Q Consensus 934 ~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~g~~ 1003 (1106)
+.+ ..+++.++||+|++.++. .|++||+.++. ++.++ +.++++++..++.+.. |+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 457789999999998876 59999999852 22332 3467788888876543 3445544
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
| .+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|++||+++ ..+.+|+|++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 3 5799999999999999999999999999999999999999999999875 5899999999985 5678999999986
Q ss_pred CCEEEEecCC
Q 001293 1084 GGQEIYVGPL 1093 (1106)
Q Consensus 1084 Gg~~~~~g~~ 1093 (1106)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 689988873
No 402
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-35 Score=321.88 Aligned_cols=211 Identities=22% Similarity=0.336 Sum_probs=166.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 49999999999999999999999999999999999986410 1289999999886421 1245799999998889
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++....+.... ......++.+++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 999999999887543211000 001123456778888742111111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++||.++|+..++.+++|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--D-YTIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEecCHHHHHHhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998742 3 45556788888999999999999
Q ss_pred c------CCeEEEEcChHHHH
Q 001293 399 S------DGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~------~G~iv~~G~~~~~~ 413 (1106)
+ +|++++.|+++++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 6 79999999998764
No 403
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-35 Score=320.26 Aligned_cols=209 Identities=19% Similarity=0.275 Sum_probs=165.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCC---CCCCCCceeEEEEcCccCCCCc-----ccceEEEEcCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGK---LDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNH 237 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|. +++. ..+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 17 HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 499999999999999999999999999999999997 3431 12899999999875421 23579999999877
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++ .||+||+.++.+..+.... + .....++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN-A--------------------------------FIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 6999999987543221000 0 01123566788888864322222
Q ss_pred cccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEE
Q 001293 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1106)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.++||++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEEE
Confidence 23456799999999999999999999999999999999999999999999873 34 4555577888889999999999
Q ss_pred EcCCeEEEEcChHHHH
Q 001293 398 LSDGQIVYQGPRELVL 413 (1106)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1106)
|++|+++++|+++++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999999874
No 404
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=8.8e-35 Score=321.03 Aligned_cols=214 Identities=21% Similarity=0.282 Sum_probs=174.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--eeeeEEEEcCc
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGY 932 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~ 932 (1106)
.++++|+++.++ ..+|+|+|++|++||+++|+|+||||||||+++|+|...+. +..|+|.++|.
T Consensus 4 ~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 578899987762 24899999999999999999999999999999999986531 16899999998
Q ss_pred cCCcccc-cceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc---ccccccCCCCCC
Q 001293 933 PKKQETF-ARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP---LRQSLVGLPGVS 1006 (1106)
Q Consensus 933 ~~~~~~~-~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~---~~~~~~g~~g~~ 1006 (1106)
++..... ++.++|++|++. +.+..|+.+++.+....... .. ..+.++++++.+++.+ ..+.. +.
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALGK---PA--DDATLTAALEAVGLENAARVLKLY-----PF 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcCC---Ch--HHHHHHHHHHHcCCCChhhhhhcC-----Cc
Confidence 7643322 357999999974 44567999988764322211 11 2255788999999976 23333 46
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
.||+|||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-G 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998754 899999999987 57788999999986 5
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 218 ~i~~~~~~~ 226 (254)
T PRK10418 218 RIVEQGDVE 226 (254)
T ss_pred EEEEecCHH
Confidence 899988854
No 405
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2.3e-33 Score=363.47 Aligned_cols=134 Identities=22% Similarity=0.252 Sum_probs=107.2
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccc-cccccCCCCCCCCCHHHHHHHHHHHHHh---cCCC
Q 001293 952 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1027 (1106)
Q Consensus 952 ~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~-~~~~~g~~g~~~LSgGqrqrl~iA~aL~---~~p~ 1027 (1106)
.+...||.|+|.++..-......+.++..+.+ ++++.++|.++ .+.. +..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 34567999999887653221111223334445 57888999775 4554 3579999999999999998 6999
Q ss_pred eEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe-----cCCEEEEecCC
Q 001293 1028 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1093 (1106)
Q Consensus 1028 illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~Gg~~~~~g~~ 1093 (1106)
++||||||+|||+.+...+++.|+++.++|.|||+++|+++ .+ +.+|++++|. .||+++..|+.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 99999999999999999999999999888999999999986 35 8999999996 36899999875
No 406
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.5e-35 Score=319.18 Aligned_cols=202 Identities=27% Similarity=0.325 Sum_probs=165.7
Q ss_pred eeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCCHHHHH
Q 001293 168 LKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETL 247 (1106)
Q Consensus 168 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1106)
|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999998 9999999998765332 358999999889999999999
Q ss_pred HHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccccccCCChh
Q 001293 248 AFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGG 327 (1106)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1106)
.++......+.. ..+....++.+++.+||++..++.+ ..||||
T Consensus 76 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDLS--------------------------------KSERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccCCC--------------------------------HHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 886321000000 0001123567788999987666554 469999
Q ss_pred hhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCeEEEEc
Q 001293 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1106)
Q Consensus 328 qrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1106)
|||||+||++|+.+|+++||||||+|||+.++..+.+.|+++++.. +.+|+.++|+..++.+++|+|++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEH-RVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999876533 445555788888999999999999999999988
Q ss_pred ChHHH
Q 001293 408 PRELV 412 (1106)
Q Consensus 408 ~~~~~ 412 (1106)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 66543
No 407
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-35 Score=315.81 Aligned_cols=224 Identities=23% Similarity=0.324 Sum_probs=179.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCeeeeEEEEcCc
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNITISGY 932 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~---~~~~~G~i~i~g~ 932 (1106)
++.+|++-++... .+...+++||||++++||++||+|.|||||||+.++|.|... .....|+|.++|.
T Consensus 2 L~v~nL~v~f~~~---------~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTD---------AGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecC---------CccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 3556766555432 123579999999999999999999999999999999999765 2346689999998
Q ss_pred cCCc---c----cccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCC
Q 001293 933 PKKQ---E----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLP 1003 (1106)
Q Consensus 933 ~~~~---~----~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~ 1003 (1106)
++-. . -+.+.++|++|++. +.|.+||.+.+.=......... ..++..+.+.++|+.+++.+-.......
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~Y- 150 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKSY- 150 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhhC-
Confidence 7432 1 13357999999975 6788899777665443322111 3444566788999999998654333333
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+.+|||||||||.||.||+.+|++||.||||++||...++.|+++|+++.+ .|.++|++|||+.. +.+.||+|.||.
T Consensus 151 -PhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMY 228 (316)
T COG0444 151 -PHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMY 228 (316)
T ss_pred -CcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEE
Confidence 368999999999999999999999999999999999999999999999985 69999999999985 899999999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
. |++|+.|+.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 699999995
No 408
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=323.27 Aligned_cols=218 Identities=22% Similarity=0.253 Sum_probs=177.7
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeeeEEEE
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITI 929 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i 929 (1106)
...++++|+++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|.... .+..|+|.+
T Consensus 23 ~~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i 89 (272)
T PRK14236 23 QTALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRL 89 (272)
T ss_pred CcEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEE
Confidence 34689999998874 23699999999999999999999999999999999997542 136899999
Q ss_pred cCccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----cccccc
Q 001293 930 SGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLV 1000 (1106)
Q Consensus 930 ~g~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~ 1000 (1106)
+|.+... ..+++.++|++|++.+++. |++||+.+....... ...+..++.++++++.+++.+ ..+..
T Consensus 90 ~g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~- 165 (272)
T PRK14236 90 DGQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGI--NNRRVLDEAVERSLRGAALWDEVKDRLHEN- 165 (272)
T ss_pred CCEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCChhHHHHhhCC-
Confidence 9987642 2346789999999888775 999999876433211 112223455788899988853 22222
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEE
Q 001293 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1080 (1106)
Q Consensus 1001 g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~ 1080 (1106)
+..||+|||||++|||||+.+|+||||||||+|||+.++..+++.|+++.+ +.|||++||+++ ++.+.||++++
T Consensus 166 ----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~ 239 (272)
T PRK14236 166 ----AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAF 239 (272)
T ss_pred ----cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEE
Confidence 457999999999999999999999999999999999999999999999875 799999999987 57788999999
Q ss_pred EecCCEEEEecCCC
Q 001293 1081 MKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1081 l~~Gg~~~~~g~~g 1094 (1106)
|++ |++++.|+..
T Consensus 240 l~~-G~i~~~g~~~ 252 (272)
T PRK14236 240 MYM-GKLVEYGDTD 252 (272)
T ss_pred EEC-CEEEecCCHH
Confidence 986 5898988754
No 409
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.7e-33 Score=353.79 Aligned_cols=212 Identities=27% Similarity=0.433 Sum_probs=178.6
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1106)
...++|+||+|+|+. .+.++|+|+|++|+||+++||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 461 ~~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~ 527 (694)
T TIGR03375 461 QGEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQ--PTEGSVLLDGV 527 (694)
T ss_pred cceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 357999999999852 22468999999999999999999999999999999999876 56899999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccc-------cccCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-------SLVGL 1002 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~g~ 1002 (1106)
++.+ ..+++.++||+|++.++. .|++||+.++. ++.+ ++.++++++.+++.+..+ +.+|.
T Consensus 528 ~l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e 597 (694)
T TIGR03375 528 DIRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGE 597 (694)
T ss_pred EhhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCC----HHHHHHHHHHcChHHHHHhCcccccceecC
Confidence 8654 457889999999998876 59999998752 2222 234677888888765443 33343
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
. +.+||||||||++|||||+++|+||+||||||+||+++++.|++.++++. +++|+|++||+++ ..+.||+|++|+
T Consensus 598 ~-G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~ 673 (694)
T TIGR03375 598 R-GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMD 673 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEe
Confidence 3 46799999999999999999999999999999999999999999999886 4899999999986 567899999998
Q ss_pred cCCEEEEecC
Q 001293 1083 RGGQEIYVGP 1092 (1106)
Q Consensus 1083 ~Gg~~~~~g~ 1092 (1106)
+ |++++.|+
T Consensus 674 ~-G~i~e~G~ 682 (694)
T TIGR03375 674 N-GRIVADGP 682 (694)
T ss_pred C-CEEEeeCC
Confidence 6 68999887
No 410
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.1e-33 Score=354.12 Aligned_cols=122 Identities=24% Similarity=0.325 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccc-cccccCCCCCCCCCHHHHHHHHHHHHHhcCC---CeEEE
Q 001293 956 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1031 (1106)
Q Consensus 956 ~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~-~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p---~illL 1031 (1106)
+||.|++.|...+. .. ....+.++.++|..+ .+.. +..||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~---~i------~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP---KI------ARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch---hh------hHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 68888888764331 11 123578899999753 3443 3579999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe-----cCCEEEEecCC
Q 001293 1032 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1093 (1106)
Q Consensus 1032 DEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~-----~Gg~~~~~g~~ 1093 (1106)
||||+|||+.+...+++.++++.++|.|||+++|+++ ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999985 346899999995 57899999874
No 411
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-33 Score=354.92 Aligned_cols=213 Identities=27% Similarity=0.408 Sum_probs=177.7
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1106)
+..++|+||+|.|+. +++.+|+|+|++++||+++||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 457999999999852 22458999999999999999999999999999999999876 56899999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccc-------cccCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-------SLVGL 1002 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~-------~~~g~ 1002 (1106)
++++ ..+++.++||+|++.+++ .|++||+.++. ++.+ ++.++++++..++.+..+ ..++.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCC----HHHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 8654 457788999999988775 69999998642 2222 234667788877765433 33343
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
++.+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|++||+++ ..+.||++++|+
T Consensus 590 -~g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 -KGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred -CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 346899999999999999999999999999999999999999999999984 5899999999986 456799999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |++++.|+.
T Consensus 666 ~-G~i~~~g~~ 675 (694)
T TIGR01846 666 K-GQIAESGRH 675 (694)
T ss_pred C-CEEEEeCCH
Confidence 7 689999874
No 412
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=5e-35 Score=318.20 Aligned_cols=201 Identities=24% Similarity=0.316 Sum_probs=165.9
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--eeeeEEEEcCccCCcccc-cceEEEEccCCC--CCCCCC
Q 001293 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGYPKKQETF-ARISGYCEQNDI--HSPFVT 957 (1106)
Q Consensus 883 ~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~q~~~--~~~~~t 957 (1106)
+|+|+|++|++|++++|+|+||||||||+++|+|...+. +..|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999976520 168999999988654322 357999999984 556789
Q ss_pred HHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc---cccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCC
Q 001293 958 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN---PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1106)
Q Consensus 958 v~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~---~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEP 1034 (1106)
+.|++.+....... ..+..++.++++++.+++. +..+.. +..||||||||++|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999775432211 1233345688999999997 344443 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1035 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1035 tsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|+|||+.++..+.+.|+++.++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999987 57788999999986 688888874
No 413
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.9e-35 Score=371.15 Aligned_cols=257 Identities=24% Similarity=0.387 Sum_probs=195.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++.+..++|+.++++.+++.- . .+....+.....++|+|+++.++.
T Consensus 421 ~~~~~~~~~ri~~~l~~~~e~~-----~-~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 467 (694)
T TIGR01846 421 FQQTGIALERLGDILNSPTEPR-----S-AGLAALPELRGAITFENIRFRYAP--------------------------- 467 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCcc-----C-CCCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 5678888899988887665510 0 000111222357999999998742
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
..+.+|+|+|+.|+||+.++|+||||||||||+++|+|+++|+ +|+|++||+++++... ++.++||+|+
T Consensus 468 -----~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~ 539 (694)
T TIGR01846 468 -----DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQE 539 (694)
T ss_pred -----CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccC
Confidence 1134899999999999999999999999999999999999998 9999999999887654 4789999997
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.++ +.|++|||.++. +....+.+.++++.. + .++.++ .|+...||
T Consensus 540 ~~lf-~~ti~eNi~~~~----~~~~~~~i~~a~~~~---~------------------------l~~~i~--~lp~gl~t 585 (694)
T TIGR01846 540 NVLF-SRSIRDNIALCN----PGAPFEHVIHAAKLA---G------------------------AHDFIS--ELPQGYNT 585 (694)
T ss_pred Ceeh-hhhHHHHHhcCC----CCCCHHHHHHHHHHc---C------------------------hHHHHH--hCcCccCc
Confidence 6555 579999998753 111122222222111 0 111222 36778899
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+ .+||||||||++||||++.+|++|+||||||+||+.++..+.+.|++.. .+.|+|+ ++|.. +....||+
T Consensus 586 ~i~~~g-~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~-itH~~-~~~~~~d~ 660 (694)
T TIGR01846 586 EVGEKG-ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVII-IAHRL-STVRACDR 660 (694)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEE-EeCCh-HHHHhCCE
Confidence 999865 5799999999999999999999999999999999999999999998863 3455555 55544 45567999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+++++|+++++.+
T Consensus 661 ii~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 661 IIVLEKGQIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999998864
No 414
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=318.94 Aligned_cols=210 Identities=20% Similarity=0.325 Sum_probs=165.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCCc-----ccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14270 18 QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPF 97 (251)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcC
Confidence 4999999999999999999999999999999999998751 013899999999875321 245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ +||+||+.|.....+.... + +....++.+++.+||........ +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14270 98 P-MSIYDNVAYGPRIHGIKDK-K--------------------------------ELDKIVEWALKKAALWDEVKDDL-K 142 (251)
T ss_pred C-CcHHHHHHhHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHcCCchhhhhHh-h
Confidence 6 8999999987543221000 0 00123455677887742111111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..++.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.+.||++++|
T Consensus 143 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~l 219 (251)
T PRK14270 143 KSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAFF 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 44555777888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 220 LMGDLIEFNKTEKIF 234 (251)
T ss_pred ECCeEEEeCCHHHHh
Confidence 999999999998874
No 415
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5.3e-35 Score=353.60 Aligned_cols=217 Identities=26% Similarity=0.329 Sum_probs=181.8
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|++++|+ ++.+|+|+||+|++|+++||+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 77889887764 2469999999999999999999999999999999999876 46899999998753
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhcC-CCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRL-SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 936 ~~----~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~-~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..++.++|++|++.+++.+||+||+.|+...+. ....+.+..++.+.++++.+++.+..+.. +..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKL-----VGELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCc-----hhhCCH
Confidence 21 124569999999988889999999988643211 01122233345678899999998877665 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
|||||++||+||+.+|++|||||||+|||+.++..+++.|+++.++|.|||++|||++ ++.+.||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999987 57889999999986 688888
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 223 ~~~~ 226 (501)
T PRK10762 223 REVA 226 (501)
T ss_pred cCcC
Confidence 8764
No 416
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.3e-35 Score=361.91 Aligned_cols=256 Identities=21% Similarity=0.298 Sum_probs=191.9
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.+......+|+.++++.+++. .. .....+....+++|+|+++.++.
T Consensus 280 ~~~~~~a~~ri~~ll~~~~~~-----~~--~~~~~~~~~~~I~~~~v~~~y~~--------------------------- 325 (569)
T PRK10789 280 VERGSAAYSRIRAMLAEAPVV-----KD--GSEPVPEGRGELDVNIRQFTYPQ--------------------------- 325 (569)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cC--CCCCCCCCCCcEEEEEEEEECCC---------------------------
Confidence 456677778887777655431 00 00011112346999999988732
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
.+.++|+|+|++++||+.++|+||||||||||+++|+|+++|+ +|+|.+||.++.+... ++.++||+|+
T Consensus 326 -----~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 397 (569)
T PRK10789 326 -----TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQT 397 (569)
T ss_pred -----CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccC
Confidence 1134899999999999999999999999999999999999998 9999999999876543 4679999998
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+.++. .|++|||.++.. ....+.+.++.+. .++ +. ....|++..||
T Consensus 398 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~---~~l------------------------~~--~i~~lp~gl~t 443 (569)
T PRK10789 398 PFLFS-DTVANNIALGRP----DATQQEIEHVARL---ASV------------------------HD--DILRLPQGYDT 443 (569)
T ss_pred Ceecc-ccHHHHHhcCCC----CCCHHHHHHHHHH---cCC------------------------HH--HHHhCcCcccc
Confidence 76665 699999987531 1111111111111 000 00 12356788899
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+ ..||||||||++||||++.+|++++|||||++||+.++..+.+.|+++. .++|+|++. |+. +..+.+|+
T Consensus 444 ~~~~~g-~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~it-H~~-~~~~~~d~ 518 (569)
T PRK10789 444 EVGERG-VMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVIISA-HRL-SALTEASE 518 (569)
T ss_pred eecCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEEe-cch-hHHHcCCE
Confidence 999864 4699999999999999999999999999999999999999999998863 456666644 443 45677999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+++.+|+++++.+
T Consensus 519 i~~l~~G~i~~~g~~~~l~~ 538 (569)
T PRK10789 519 ILVMQHGHIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEeCCEEEEecCHHHHHH
Confidence 99999999999999998764
No 417
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=319.19 Aligned_cols=211 Identities=21% Similarity=0.307 Sum_probs=167.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+...+|+|.++|.++... ..++.++|++|+..++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14256 18 HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPF 97 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCC
Confidence 49999999999999999999999999999999999986 3111289999999887432 1246799999998889
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+||+||+.++.+..+.... + +....++.+++.+|+........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14256 98 PAMSIYDNVIAGYKLNGRVNR-S--------------------------------EADEIVESSLKRVALWDEVKDRL-K 143 (252)
T ss_pred CcCcHHHHHHhHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 999999999876533210000 0 00123456778888754211111 1
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.. + ++||.++|+..++.++||++++|
T Consensus 144 ~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l 220 (252)
T PRK14256 144 SNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAFF 220 (252)
T ss_pred CCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999999753 3 45566778888999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 221 YMGDLVECGETKKIF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 418
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.3e-34 Score=320.54 Aligned_cols=206 Identities=25% Similarity=0.382 Sum_probs=167.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCcc-----CCCCcc-------cceEEEEcC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1106)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 4999999999999999999999999999999999999998 9999999987 554322 246999999
Q ss_pred CC--CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-
Q 001293 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1106)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1106)
++ .+++.+|+.||+.+.....+... .. +....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGARH-YG--------------------------------DIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccCc-HH--------------------------------HHHHHHHHHHHHcCCChh
Confidence 86 35777899999976432111000 00 01123566788899963
Q ss_pred ccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHh
Q 001293 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1106)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1106)
..++. +..|||||||||+|||||+.+|++|||||||+|||+.+...+.+.|+++.. ..+.+|+.++|+..++.+
T Consensus 144 ~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-ELGLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHH
Confidence 44443 456999999999999999999999999999999999999999999998765 334556668888899999
Q ss_pred hcCeEEEEcCCeEEEEcChHHHH
Q 001293 391 LFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1106)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999988763
No 419
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=320.32 Aligned_cols=220 Identities=19% Similarity=0.228 Sum_probs=177.0
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--C-eeeeEEEEc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITIS 930 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~ 930 (1106)
..+..+.+++++. +..+|+|+||++++|+++||+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 3466677766653 35699999999999999999999999999999999997642 1 258999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCC
Q 001293 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 1005 (1106)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~ 1005 (1106)
|.++.. ..+++.++|++|++.++ .+|+.||+.++...+.. .....+.+.++++.+++.+........ .+
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNRY----KGDLGDRVKHALQGAALWDEVKDKLKV-SG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcCc----hHHHHHHHHHHHHHcCCchhhhhhhhC-Cc
Confidence 987632 23456799999998776 59999999987543321 122345678899999985432222111 24
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe---
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK--- 1082 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~--- 1082 (1106)
..||+|||||++|||||+.+|++|||||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.||++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 6799999999999999999999999999999999999999999999985 4799999999987 5788999999997
Q ss_pred ----cCCEEEEecCCC
Q 001293 1083 ----RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ----~Gg~~~~~g~~g 1094 (1106)
++|++++.|+..
T Consensus 226 ~~~~~~G~i~~~g~~~ 241 (261)
T PRK14263 226 SQGTRTGYLVEMGPTA 241 (261)
T ss_pred ccccCCceEEEeCCHH
Confidence 468999998854
No 420
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=1.1e-34 Score=313.82 Aligned_cols=192 Identities=27% Similarity=0.352 Sum_probs=159.3
Q ss_pred CceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCCCCCCH
Q 001293 879 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 958 (1106)
Q Consensus 879 ~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv 958 (1106)
+++++|+|+||+|++|++++|+|+||||||||+++|+|... +..|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 45679999999999999999999999999999999999765 568999999976421 1112234567899
Q ss_pred HHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCC
Q 001293 959 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1038 (1106)
Q Consensus 959 ~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgL 1038 (1106)
+||+.+....+. ......++.++++++.+++.+..+.. +.+||||||||++|||+|+.+|++|||||||+||
T Consensus 102 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLP-----VKTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999988654321 22334445678899999998777665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1039 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1039 D~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
|+.++..+++.++++.++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998777899999999986 57788999999986 5787765
No 421
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=319.41 Aligned_cols=220 Identities=22% Similarity=0.242 Sum_probs=174.9
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1106)
.+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|...+. +..|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367888887764 246999999999999999999999999999999999975421 3589999999
Q ss_pred ccCC----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 001293 932 YPKK----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1106)
Q Consensus 932 ~~~~----~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~ 1007 (1106)
.++. ....++.++|++|++.+++ .|+.||+.+...... ....+...+.+.++++.+++.+........ .+.+
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 8753 1234567999999988877 899999987643221 111223345577788888875321111111 1457
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 699999999987 57888999999986 588
Q ss_pred EEecCCC
Q 001293 1088 IYVGPLG 1094 (1106)
Q Consensus 1088 ~~~g~~g 1094 (1106)
++.|+..
T Consensus 223 ~~~g~~~ 229 (249)
T PRK14253 223 VEHDDTQ 229 (249)
T ss_pred EEeCCHH
Confidence 8888754
No 422
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-35 Score=324.58 Aligned_cols=218 Identities=22% Similarity=0.380 Sum_probs=174.6
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++ +++.+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 578899988773 12469999999999999999999999999999999999866 4689999999876
Q ss_pred CcccccceEEEEccCCCCC--CCCCHHHHHHHHHhhc-CCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 935 KQETFARISGYCEQNDIHS--PFVTIYESLLFSAWLR-LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~~~--~~~tv~e~l~~~~~~r-~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
.....++.++|++|++.+. ...++++++.++.... .............++++++.+++.+..+.. +..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQ-----IGELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCC-----cccCCHH
Confidence 4332334699999997653 2346888886542110 000111122344577899999998777665 3579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||++|||||+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.||+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999987 578899999776 4 6899988
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 764
No 423
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=319.45 Aligned_cols=220 Identities=20% Similarity=0.247 Sum_probs=174.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1106)
.+.++|+++.++ ++.+|+|+||+|++|+++||+|+||||||||+++|+|...+. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 367888887764 235999999999999999999999999999999999976521 2369999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
.++.. ..+++.++|++|++.+++. |++||+.+....+... ..+...+.++++++.+++.+........ .+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTT--AQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCC--hhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 87532 2346779999999988774 9999999875433211 1122234567788888875321111111 146
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
+||+|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.||++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999984 5899999999987 57888999999986 58
Q ss_pred EEEecCCC
Q 001293 1087 EIYVGPLG 1094 (1106)
Q Consensus 1087 ~~~~g~~g 1094 (1106)
+++.|+..
T Consensus 224 i~~~~~~~ 231 (251)
T PRK14249 224 LVEYGRTG 231 (251)
T ss_pred EEEeCCHH
Confidence 88888754
No 424
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=318.19 Aligned_cols=208 Identities=19% Similarity=0.275 Sum_probs=166.5
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCceeEEEEcCccCCCCc---ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 239 (1106)
.+|+|+|+++++|++++|+||||||||||+++|+|.++ |+ +|+|+++|+++.... .++.++|++|++.+++
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~ 92 (246)
T PRK14269 16 QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV 92 (246)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCcccc
Confidence 49999999999999999999999999999999999975 45 899999999876532 2457999999987776
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.||+||+.++...++..... ......++.+++.+||........ ++
T Consensus 93 -~tv~eni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~ 138 (246)
T PRK14269 93 -KSIYENISYAPKLHGMIKNK--------------------------------DEEEALVVDCLQKVGLFEEVKDKL-KQ 138 (246)
T ss_pred -ccHHHHhhhHHhhcCcccCh--------------------------------HHHHHHHHHHHHHcCCChhhhHHh-cC
Confidence 69999999865432210000 001123456788888853211111 23
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
..+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+++|+|++|+
T Consensus 139 ~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~ 215 (246)
T PRK14269 139 NALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--HN-LSMIMVTHNMQQGKRVADYTAFFH 215 (246)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--CC-CEEEEEecCHHHHHhhCcEEEEEE
Confidence 456799999999999999999999999999999999999999999999874 24 456667888889999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~g~~~~~~ 229 (246)
T PRK14269 216 LGELIEFGESKEFF 229 (246)
T ss_pred CCEEEEECCHHHHH
Confidence 99999999988763
No 425
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.7e-34 Score=318.71 Aligned_cols=206 Identities=23% Similarity=0.278 Sum_probs=165.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC----CCCceeEEEEcCccCCCCcc-cceEEEEcCCCC--CC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDN--HI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~ 238 (1106)
++|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|.++..... ++.++||+|++. +.
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~ 93 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFN 93 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccC
Confidence 389999999999999999999999999999999999988 6 9999999998754322 257999999864 44
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+|+.+++.+.+...+... ....+..+++.+||.+.. +.+ +
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~l~~~~l~~~~-~~~-~ 135 (254)
T PRK10418 94 PLHTMHTHARETCLALGKPA------------------------------------DDATLTAALEAVGLENAA-RVL-K 135 (254)
T ss_pred ccccHHHHHHHHHHHcCCCh------------------------------------HHHHHHHHHHHcCCCChh-hhh-h
Confidence 66899999876543221100 012345678889987521 111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++++. .+++|+.++|+..++.+.+|++++|
T Consensus 136 ~~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 136 LYPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred cCCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEE
Confidence 334579999999999999999999999999999999999999999999987653 3445566778888888999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 426
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=319.42 Aligned_cols=210 Identities=21% Similarity=0.348 Sum_probs=164.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++||+|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 49999999999999999999999999999999999853 5212389999999887431 1246799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ +||+||+.++....+.... + .....++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK-Q--------------------------------VLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 8999999987543221000 0 00122455677777643211111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+.+..|||||||||+||+||+.+|++|||||||+|||+.+...+.+.|+++.+ + .+|+.++|+..++.+.||+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998743 3 45566778888999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998874
No 427
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=319.01 Aligned_cols=217 Identities=23% Similarity=0.277 Sum_probs=174.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCe---eeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 931 (1106)
.+.++|+++.++ +..+|+|+||+|++|+++||+|+||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 367788887764 2469999999999999999999999999999999999764322 379999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++.+|+.||+.+....... ...+...+.+++.++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGI--RDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87532 23456799999999888889999999876432211 122233445666777776542 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999987 5778899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |++++.|+..
T Consensus 222 ~-G~i~~~~~~~ 232 (252)
T PRK14272 222 V-GDLVEHGPTD 232 (252)
T ss_pred C-CEEEEeCCHH
Confidence 6 5888888754
No 428
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-35 Score=354.12 Aligned_cols=217 Identities=25% Similarity=0.306 Sum_probs=181.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|++++|+ ++.+|+|+||+|++|+++||+||||||||||+++|+|... +..|+|.++|.++.
T Consensus 6 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 70 (510)
T PRK09700 6 ISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINYN 70 (510)
T ss_pred EEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEECC
Confidence 78899988774 2469999999999999999999999999999999999875 46899999998764
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhc----CCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 001293 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLR----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1106)
Q Consensus 936 ~~----~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r----~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~ 1007 (1106)
.. ..++.+||++|++.+++.+||+||+.++.... .....+.+..++.+.++++.+++.+..+.. +.+
T Consensus 71 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (510)
T PRK09700 71 KLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEK-----VAN 145 (510)
T ss_pred CCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccc-----hhh
Confidence 31 12356999999998888999999998753211 100112233445688899999998777765 357
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||++||+++ .+...||++++|++ |++
T Consensus 146 LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~i 223 (510)
T PRK09700 146 LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GSS 223 (510)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999999878999999999987 57788999999986 688
Q ss_pred EEecCCC
Q 001293 1088 IYVGPLG 1094 (1106)
Q Consensus 1088 ~~~g~~g 1094 (1106)
++.|+..
T Consensus 224 ~~~g~~~ 230 (510)
T PRK09700 224 VCSGMVS 230 (510)
T ss_pred eeecchh
Confidence 8888753
No 429
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=323.04 Aligned_cols=216 Identities=20% Similarity=0.250 Sum_probs=174.5
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1106)
.+.++|+++.|+ +..+|+|+||+|++|++++|+|+||||||||+++|+|... + .+..|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478999988774 2369999999999999999999999999999999999642 1 13689999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++. |++||+.+...... .......+..+.++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1345679999999887774 99999987643221 1112223455677888888742 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999987 5788999999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |++++.|+..
T Consensus 238 ~-G~i~~~~~~~ 248 (268)
T PRK14248 238 N-GDLVEYDQTE 248 (268)
T ss_pred C-CEEEEeCCHH
Confidence 6 6899988753
No 430
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.1e-35 Score=312.52 Aligned_cols=201 Identities=23% Similarity=0.294 Sum_probs=171.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++ ++.+|+++||++++|++++|+|+||||||||+++|+|... +..|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 478899987764 2359999999999999999999999999999999999866 4689999999876
Q ss_pred CcccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 935 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 935 ~~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
.....++.++|++|++.+++.+|++||+.+....+. . ...+.++++++.+++.+..+.. +..||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~---~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---R---RAKQMPGSALAIVGLAGYEDTL-----VRQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---C---cHHHHHHHHHHHcCChhhccCC-----hhhCCHHHHH
Confidence 543345679999999888888999999988653321 1 1223467889999998776665 3579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
|++|||+|+.+|++|+|||||+|||+.+++.+++.++++.++|+|||++||+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999997 6889999999986
No 431
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=324.37 Aligned_cols=216 Identities=20% Similarity=0.269 Sum_probs=174.6
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1106)
.+.++++++.|+ ...+|+|+||+|++|++++|+|+||||||||+++|+|... + .+..|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 478999988774 2359999999999999999999999999999999999642 1 12689999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc----cccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~----~~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++. ||+||+.|....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1345679999999887774 999999986533211 11223345677888888874 222322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||||+.+|++|||||||+|||+.++..+++.|+++.. ++|||+++|+++ ++.+.||++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999987 5778899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |++++.|+..
T Consensus 256 ~-G~i~~~g~~~ 266 (286)
T PRK14275 256 E-GVLVEHAPTA 266 (286)
T ss_pred C-CEEEEeCCHH
Confidence 6 6888988853
No 432
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=319.75 Aligned_cols=210 Identities=20% Similarity=0.311 Sum_probs=164.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|.++ |+...+|+|+++|.++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 49999999999999999999999999999999999987 3211389999999987421 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+. ||+||+.|.....+..... +....++.+++.+|+.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~~---------------------------------~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNKK---------------------------------KLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCHH---------------------------------HHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 9999998865432210000 00123455677778753211111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
...+.||||||||++||++|+.+|+++||||||+|||+.++..+.+.|+++. .+. +++.++|+..++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~~-tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EKY-TIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cCC-EEEEEEcCHHHHHHhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 244 5555777888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999998864
No 433
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=318.34 Aligned_cols=210 Identities=21% Similarity=0.342 Sum_probs=165.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 17 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14262 17 KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPF 96 (250)
T ss_pred eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccC
Confidence 4999999999999999999999999999999999998741 01289999999886532 1246799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ +||+||+.++....+.... + ..+..+++.++.+|+....+.. .+
T Consensus 97 ~-~tv~e~l~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~-~~ 141 (250)
T PRK14262 97 P-MSIYDNVAFGPRIHGVKSK-H--------------------------------KLDRIVEESLKKAALWDEVKSE-LN 141 (250)
T ss_pred c-ccHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCCchhHHH-Hh
Confidence 7 8999999987543221000 0 0011245567777775321111 23
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+.+.+||||||||++||+||+.+|++++|||||+|||+.+...+.+.|+++.. + ++|+.++|+..++.+++|+|++|
T Consensus 142 ~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~l 218 (250)
T PRK14262 142 KPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAFM 218 (250)
T ss_pred CChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEEE
Confidence 44567999999999999999999999999999999999999999999998742 4 45566777888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 219 YRGELIEYGPTREIV 233 (250)
T ss_pred ECCEEEEecCHHHHH
Confidence 999999999998764
No 434
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4e-35 Score=325.02 Aligned_cols=210 Identities=19% Similarity=0.283 Sum_probs=173.7
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.|.|+|+++.|+. +...+|+||||+|++||++||+|+||||||||+++|+|... ..|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4789999988852 12358999999999999999999999999999999999864 379999999876
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCC------CCC
Q 001293 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGL------PGV 1005 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~------~g~ 1005 (1106)
.. ..+++.++||+|++.+++ .|+++|+.... ... ++.++++++.++|.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 345678999999998887 59999996321 111 23467889999998766654321 234
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
..||+|||||++|||||+.+|+||+|||||++||+.++..+++.|++.. .++|||+++|+++ .+ ..||++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5799999999999999999999999999999999999999999999875 4899999999985 34 45999999986 5
Q ss_pred EEEEecCC
Q 001293 1086 QEIYVGPL 1093 (1106)
Q Consensus 1086 ~~~~~g~~ 1093 (1106)
+++++|+.
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 89999985
No 435
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.3e-35 Score=322.52 Aligned_cols=211 Identities=27% Similarity=0.415 Sum_probs=162.5
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.++. ++..+|+|+||++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (237)
T cd03252 1 ITFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLA 67 (237)
T ss_pred CEEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehH
Confidence 356778776641 12358999999999999999999999999999999999875 46899999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccccc-C-----CCCCC
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLV-G-----LPGVS 1006 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~-g-----~~g~~ 1006 (1106)
. ..+++.++|++|++.+++ .||.||+.+... ....+ .+.+.++..++.++.+... + ...+.
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 137 (237)
T cd03252 68 LADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSME----RVIEAAKLAGAHDFISELPEGYDTIVGEQGA 137 (237)
T ss_pred hcCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHH----HHHHHHHHcCcHHHHHhCcccccchhhcCCC
Confidence 2 234567999999987764 699999987431 11111 1223333333322221110 0 01246
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
+||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++ +.||++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999986 4899999999987 35 56999999986 58
Q ss_pred EEEecCC
Q 001293 1087 EIYVGPL 1093 (1106)
Q Consensus 1087 ~~~~g~~ 1093 (1106)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 8888874
No 436
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=4.6e-35 Score=361.43 Aligned_cols=207 Identities=24% Similarity=0.394 Sum_probs=165.4
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1106)
++|+|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|++.+| +.|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLF-NRS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCcccc-ccc
Confidence 3899999999999999999999999999999999999998 9999999999877653 46899999987555 579
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
++|||.++.. ....+.+.++.+.. -.+..++ .+++..||.+|+.+ +
T Consensus 425 i~~Ni~~~~~----~~~d~~i~~al~~~---------------------------~l~~~i~--~lp~gldt~i~~~g-~ 470 (588)
T PRK13657 425 IEDNIRVGRP----DATDEEMRAAAERA---------------------------QAHDFIE--RKPDGYDTVVGERG-R 470 (588)
T ss_pred HHHHHhcCCC----CCCHHHHHHHHHHh---------------------------CHHHHHH--hCcccccchhcCCC-C
Confidence 9999987531 11111122211110 0111122 36777899999764 4
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.||||||||++|||||+.+|++++||||||+||+.++..|.+.|++.. .++|+|+ ++|+. +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~--~~~tvIi-itHr~-~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM--KGRTTFI-IAHRL-STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--cCCEEEE-EEecH-HHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998753 3456555 44443 5678899999999999
Q ss_pred EEEEcChHHHHH
Q 001293 403 IVYQGPRELVLE 414 (1106)
Q Consensus 403 iv~~G~~~~~~~ 414 (1106)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999998854
No 437
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-34 Score=318.75 Aligned_cols=215 Identities=24% Similarity=0.319 Sum_probs=174.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--C-eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1106)
.+.++|++++++ .+.+|+|+||+|++||++||+|+||||||||+++|+|...+ . +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 378899988774 24699999999999999999999999999999999997641 1 3589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..+..++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 234567999999988775 7999999876432211 112223455778899988842 22322
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+.+||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK-HQYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH-cCCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 46799999999999999999999999999999999999999999999985 4799999999987 5788899999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 6 588888874
No 438
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.8e-34 Score=310.62 Aligned_cols=202 Identities=19% Similarity=0.296 Sum_probs=151.9
Q ss_pred CCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcC
Q 001293 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1106)
Q Consensus 852 ~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 931 (1106)
.|-.+..+||+|.|+ +.++++++++|-|.-...+|||||||.||||||++|.|... +..|+.+-+
T Consensus 583 ~PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~--P~~GE~RKn- 647 (807)
T KOG0066|consen 583 NPPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLD--PNDGELRKN- 647 (807)
T ss_pred CCCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCC--CCcchhhcc-
Confidence 344678899999886 45679999999999999999999999999999999999776 446655432
Q ss_pred ccCCcccccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCC
Q 001293 932 YPKKQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1009 (1106)
Q Consensus 932 ~~~~~~~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LS 1009 (1106)
.+-.+|+..|+.. +...-|.-|.|.-. .+ .+.+ .+...|-.+||...++..- +..||
T Consensus 648 -------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~----FN--lpyq----~ARK~LG~fGL~sHAHTik----ikdLS 706 (807)
T KOG0066|consen 648 -------HRLRIGWFDQHANEALNGEETPVEYLQRK----FN--LPYQ----EARKQLGTFGLASHAHTIK----IKDLS 706 (807)
T ss_pred -------ceeeeechhhhhHHhhccccCHHHHHHHh----cC--CChH----HHHHHhhhhhhhhccceEe----eeecC
Confidence 1224788877643 33345666665421 11 1222 2455777788877666543 56799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
||||-||++|-.-++.|+||||||||++||.++...+-+.|+++ ...||+++||-.. |.+--+.++|+.+.|--.-
T Consensus 707 GGQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eI 782 (807)
T KOG0066|consen 707 GGQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEI 782 (807)
T ss_pred CcchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhc
Confidence 99999999999999999999999999999999999999999886 4689999999764 5555567888877654334
Q ss_pred ecCC
Q 001293 1090 VGPL 1093 (1106)
Q Consensus 1090 ~g~~ 1093 (1106)
.|.+
T Consensus 783 dGdF 786 (807)
T KOG0066|consen 783 DGDF 786 (807)
T ss_pred cccH
Confidence 4443
No 439
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.9e-35 Score=362.85 Aligned_cols=257 Identities=23% Similarity=0.364 Sum_probs=193.6
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1106)
.++.+...+|+.++++.+++. .. .....+.....++++||++.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~~-----~~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 342 (571)
T TIGR02203 297 MQRGLAAAESLFTLLDSPPEK-----DT--GTRAIERARGDVEFRNVTFRYPG--------------------------- 342 (571)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CC--CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 567778888888877655431 00 00011112346999999999742
Q ss_pred cCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCC
Q 001293 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1106)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1106)
. +.++|+|+|+.+++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 343 ---~--~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 414 (571)
T TIGR02203 343 ---R--DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQD 414 (571)
T ss_pred ---C--CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccC
Confidence 1 125999999999999999999999999999999999999998 9999999999876543 4679999997
Q ss_pred CCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccc
Q 001293 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1106)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1106)
+ ++++.|++|||.++..- ....+.+.++++. .+ .++.+ -.|++..||
T Consensus 415 ~-~lf~~Ti~~Ni~~~~~~---~~~~~~i~~~l~~---~~------------------------l~~~i--~~lp~gldt 461 (571)
T TIGR02203 415 V-VLFNDTIANNIAYGRTE---QADRAEIERALAA---AY------------------------AQDFV--DKLPLGLDT 461 (571)
T ss_pred c-ccccccHHHHHhcCCCC---CCCHHHHHHHHHH---cC------------------------hHHHH--HhCcCcccc
Confidence 7 55567999999876310 0111112221111 00 11112 136677899
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.+|+.+ +.||||||||++||||++.+|+|++||||||+||+.++..|.+.|++.. .++|+|+. +|+ ++..+.||+
T Consensus 462 ~i~~~g-~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~--~~~tiIii-tH~-~~~~~~~D~ 536 (571)
T TIGR02203 462 PIGENG-VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM--QGRTTLVI-AHR-LSTIEKADR 536 (571)
T ss_pred eecCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh--CCCEEEEE-ehh-hHHHHhCCE
Confidence 999874 5799999999999999999999999999999999999999999998753 34566554 444 366788999
Q ss_pred EEEEcCCeEEEEcChHHHHH
Q 001293 395 IILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1106)
|++|++|+++..|+++++.+
T Consensus 537 ii~l~~g~i~~~g~~~~l~~ 556 (571)
T TIGR02203 537 IVVMDDGRIVERGTHNELLA 556 (571)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999998754
No 440
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.5e-35 Score=364.15 Aligned_cols=213 Identities=28% Similarity=0.445 Sum_probs=179.4
Q ss_pred CCceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcC
Q 001293 852 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 931 (1106)
Q Consensus 852 ~p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g 931 (1106)
....++|+||+|.|+. ++++|+|+||+++|||++||+||||||||||++.|.|... +.+|+|.+||
T Consensus 325 ~~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg 390 (567)
T COG1132 325 TIGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDG 390 (567)
T ss_pred CCCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECC
Confidence 3456999999999973 3469999999999999999999999999999999999766 4689999999
Q ss_pred ccCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccc-------cccccC
Q 001293 932 YPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVG 1001 (1106)
Q Consensus 932 ~~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~-------~~~~~g 1001 (1106)
.++++ ..+++.++||+|++.++. -||+||+.++. ++.++ +.++++++..++.+. .|+.+|
T Consensus 391 ~dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vg 460 (567)
T COG1132 391 IDIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATD----EEIEEALKLANAHEFIANLPDGYDTIVG 460 (567)
T ss_pred EehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCH----HHHHHHHHHhChHHHHHhCcccccceec
Confidence 88654 567889999999999887 79999999863 22222 346666666655442 456666
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEE
Q 001293 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1106)
Q Consensus 1002 ~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1081 (1106)
. ++..||||||||++||||++++|+||+||||||+||+++++.|++.++++. +|+|+|+++|+++ ..+.+|+|++|
T Consensus 461 e-~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl 536 (567)
T COG1132 461 E-RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVL 536 (567)
T ss_pred C-CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEE
Confidence 3 446899999999999999999999999999999999999999999999876 6799999999996 44559999999
Q ss_pred ecCCEEEEecCC
Q 001293 1082 KRGGQEIYVGPL 1093 (1106)
Q Consensus 1082 ~~Gg~~~~~g~~ 1093 (1106)
++ |++++.|+-
T Consensus 537 ~~-G~i~e~G~h 547 (567)
T COG1132 537 DN-GRIVERGTH 547 (567)
T ss_pred EC-CEEEEecCH
Confidence 97 579999984
No 441
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=321.65 Aligned_cols=206 Identities=21% Similarity=0.323 Sum_probs=162.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCC-----cccceEEEEcCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 49999999999999999999999999999999999987 45 89999999886421 1235699999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+++ .||+||+.+++...+... + ....++.+++.+++....+..
T Consensus 104 ~l~~-~tv~enl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~ 147 (269)
T PRK14259 104 NPFP-KSIYENIAFGARINGYTG------D-----------------------------MDELVERSLRKAAVWDECKDK 147 (269)
T ss_pred ccch-hhHHHHHhhhhhhcCCcH------H-----------------------------HHHHHHHHHHHhCCcchhhhh
Confidence 7777 599999998764332100 0 001234456666653211111
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
. +..+..|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++. .+ .+||.++|+..++.++||++
T Consensus 148 ~-~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i 223 (269)
T PRK14259 148 L-NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--KN-FTIVIVTHNMQQAVRVSDMT 223 (269)
T ss_pred h-CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEE
Confidence 1 23456799999999999999999999999999999999999999999999874 23 45666788889999999999
Q ss_pred EEEcC-----------CeEEEEcChHHHHH
Q 001293 396 ILLSD-----------GQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~-----------G~iv~~G~~~~~~~ 414 (1106)
++|++ |++++.|+++++.+
T Consensus 224 ~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 224 AFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEeccccccccccccceEEEeCCHHHHHh
Confidence 99996 67899999988743
No 442
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=6.8e-35 Score=310.38 Aligned_cols=195 Identities=27% Similarity=0.333 Sum_probs=165.6
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
+++|+++.++ +..+|+|+|++|++|+++||+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4567776653 2468999999999999999999999999999999999865 468999999987532
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 937 --~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
..+++.++|++|++.+++..|++||+.+.... . ..+.++++++.+++.+..+.. +..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHH
Confidence 23556799999998888889999999875311 1 134578899999998776654 3579999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEE
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1081 (1106)
|++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||++. ++.+.+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999986 578889999877
No 443
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=320.43 Aligned_cols=216 Identities=19% Similarity=0.223 Sum_probs=174.9
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITIS 930 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~ 930 (1106)
..+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|..... +..|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3588999988874 236999999999999999999999999999999999975321 247999999
Q ss_pred CccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccC
Q 001293 931 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVG 1001 (1106)
Q Consensus 931 g~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g 1001 (1106)
|.++.. ..+++.++|++|++.+++. |+.||+.+....+.. . ...++.+.++++.+++.. ..+..
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~~---~-~~~~~~~~~~l~~~~l~~~l~~~~~~~-- 158 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANGY---K-GNLDELVEDSLRRAAIWEEVKDKLKEK-- 158 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcCc---h-HHHHHHHHHHHHHcccchhhHHHhcCC--
Confidence 987532 2345679999999887764 999999886433211 1 112344667788887742 22222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEE
Q 001293 1002 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1106)
Q Consensus 1002 ~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1081 (1106)
+..||||||||++|||||+.+|++|||||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.||++++|
T Consensus 159 ---~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l 233 (274)
T PRK14265 159 ---GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFF 233 (274)
T ss_pred ---cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999997 588899999999
Q ss_pred ec--------CCEEEEecCCC
Q 001293 1082 KR--------GGQEIYVGPLG 1094 (1106)
Q Consensus 1082 ~~--------Gg~~~~~g~~g 1094 (1106)
++ .|++++.|+..
T Consensus 234 ~~~~~~~~~~~G~~~~~g~~~ 254 (274)
T PRK14265 234 NTEIDEYGKRRGKLVEFSPTE 254 (274)
T ss_pred ecccccccccCceEEEeCCHH
Confidence 72 57999999974
No 444
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.5e-33 Score=353.75 Aligned_cols=212 Identities=25% Similarity=0.384 Sum_probs=175.6
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1106)
...++|+||+|+|+.. +++++|+|+|++|+|||++||+|+||||||||+++|+|... +.+|+|.+||.
T Consensus 476 ~~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~ 543 (711)
T TIGR00958 476 EGLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQ--PTGGQVLLDGV 543 (711)
T ss_pred CCeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCEEEECCE
Confidence 3469999999999632 12469999999999999999999999999999999999776 56899999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccc-------ccCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGL 1002 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~g~ 1002 (1106)
++++ ..+++.++||+|++.++. .|++||+.++. ++.+ ++.++++++.+++.++.+. .+|.
T Consensus 544 ~i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~-----~~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige 613 (711)
T TIGR00958 544 PLVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL-----TDTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGE 613 (711)
T ss_pred EHHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC-----CCCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccC
Confidence 8654 457788999999998875 69999998752 1222 3447788888888765433 3443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
. ..+||||||||++|||||+++|+||+||||||+||+++++.|++ .. ..+++|+|++||+++ ..+.+|+|++|+
T Consensus 614 ~-G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~ 687 (711)
T TIGR00958 614 K-GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLK 687 (711)
T ss_pred C-CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEE
Confidence 3 46799999999999999999999999999999999999999998 22 235899999999985 567899999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++..|+.
T Consensus 688 ~-G~ive~Gt~ 697 (711)
T TIGR00958 688 K-GSVVEMGTH 697 (711)
T ss_pred C-CEEEEeeCH
Confidence 6 699998873
No 445
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=317.99 Aligned_cols=216 Identities=25% Similarity=0.261 Sum_probs=175.2
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 931 (1106)
.+.++|+++.++ ++.+|+|+||+|++|++++|+|+||||||||+++|+|..... +..|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 478899988764 246999999999999999999999999999999999964321 1479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ...++.++|++|++.+++ .||+||+.|....+.. ......++.+.++++.+++.+ ..+..
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFP-KSIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCc-ccHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87642 234567999999998877 4999999987543321 122333456778888888743 12222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|+
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 457999999999999999999999999999999999999999999999865 699999999987 4778899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |+++..|+..
T Consensus 223 ~-G~i~~~g~~~ 233 (253)
T PRK14261 223 L-GKLIEFDKTT 233 (253)
T ss_pred C-CEEEEcCCHH
Confidence 6 6888888854
No 446
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.9e-35 Score=389.96 Aligned_cols=257 Identities=19% Similarity=0.233 Sum_probs=196.9
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHh-hcCCC-CC-cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHH
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRID-RVGID-LP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1106)
.+....++||+.++.+.++|. ....+ ....+ -| ..+|+|+||++.|..
T Consensus 1199 ~e~~~~sveRi~e~~~~~~E~-----~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~------------------------ 1249 (1622)
T PLN03130 1199 AENSLNAVERVGTYIDLPSEA-----PLVIENNRPPPGWPSSGSIKFEDVVLRYRP------------------------ 1249 (1622)
T ss_pred HHHHHHHHHHHHHHhCCCCcc-----cccccCCCCCCCCCCCCcEEEEEEEEEeCC------------------------
Confidence 367778899999888766551 00000 00111 12 357999999999842
Q ss_pred hhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEE
Q 001293 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1106)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1106)
...++|+|+|++|+|||.+||+|++|||||||+++|.|+++|+ +|+|++||.++.+... ++.++||
T Consensus 1250 --------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~---~G~I~IDG~dI~~i~l~~LR~~IsiV 1318 (1622)
T PLN03130 1250 --------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELE---RGRILIDGCDISKFGLMDLRKVLGII 1318 (1622)
T ss_pred --------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCEecccCCHHHHHhccEEE
Confidence 1124999999999999999999999999999999999999998 9999999999987654 5789999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 001293 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1106)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1106)
||++.+|. .||||||.++.. ...+.+.+++++. ++ +.. +-.|+..
T Consensus 1319 pQdp~LF~-GTIreNLd~~~~-----~tdeei~~Al~~a---~l------------------------~~~--I~~lp~G 1363 (1622)
T PLN03130 1319 PQAPVLFS-GTVRFNLDPFNE-----HNDADLWESLERA---HL------------------------KDV--IRRNSLG 1363 (1622)
T ss_pred CCCCcccc-ccHHHHhCcCCC-----CCHHHHHHHHHHc---Cc------------------------HHH--HHhCccc
Confidence 99887665 699999986421 1222233332221 11 111 1246778
Q ss_pred cccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001293 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1106)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1106)
.||.||+.+. .||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++| ++++.|.. ++...
T Consensus 1364 Ldt~Vge~G~-nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~--~~~T-vI~IAHRL-~tI~~ 1438 (1622)
T PLN03130 1364 LDAEVSEAGE-NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--KSCT-MLIIAHRL-NTIID 1438 (1622)
T ss_pred cCccccCCCC-CCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC--CCCE-EEEEeCCh-HHHHh
Confidence 8999998655 699999999999999999999999999999999999999999999753 3444 45566654 55667
Q ss_pred cCeEEEEcCCeEEEEcChHHHHH
Q 001293 392 FDDIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1106)
||+|++|++|+|+++|+++++++
T Consensus 1439 ~DrIlVLd~G~IvE~Gt~~eLl~ 1461 (1622)
T PLN03130 1439 CDRILVLDAGRVVEFDTPENLLS 1461 (1622)
T ss_pred CCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999874
No 447
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=318.53 Aligned_cols=207 Identities=18% Similarity=0.288 Sum_probs=162.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCC-----cccceEEEEcCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|..+ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 49999999999999999999999999999999999864 45 89999999887532 1245799999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+++. ||+||+.++....+.... .. .+..+...++.+++.......
T Consensus 112 ~~~~~-tv~enl~~~~~~~~~~~~-----~~----------------------------~~~~~~~~l~~~~l~~~~~~~ 157 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAGERRK-----SV----------------------------LDEIVEESLTKAALWDEVKDR 157 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcCCCcH-----HH----------------------------HHHHHHHHHHHcCCCcchHHH
Confidence 77774 999999986432211000 00 011234456667764211111
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
. ++.+..||||||||++|||+|+.+|++|||||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+++|+|
T Consensus 158 ~-~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v 233 (268)
T PRK14248 158 L-HSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRT 233 (268)
T ss_pred H-hcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEE
Confidence 1 234557999999999999999999999999999999999999999999998743 3 45666778888899999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|++|++++.|+.+++.
T Consensus 234 ~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 234 AFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 448
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.8e-35 Score=283.45 Aligned_cols=202 Identities=28% Similarity=0.393 Sum_probs=171.5
Q ss_pred CccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc-------cceEEEEc
Q 001293 160 SKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYIS 232 (1106)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 232 (1106)
....+.+||++|++.|++||.++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++..+.- .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3446688999999999999999999999999999999999999998 9999999999865532 37899999
Q ss_pred CCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccc
Q 001293 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1106)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1106)
|...++|+||..||+...+.++|...+. ........|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~~----------------------------------~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSAD----------------------------------SRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCcccc----------------------------------HHHHHHHHHHHhCccccc
Confidence 9999999999999999988877632210 112345678899998766
Q ss_pred ccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhc
Q 001293 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1106)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1106)
+. ++.+|||||+|||+||||+...|+|||.||||-+||..|..+|.+.|-.+.+ ..+++++.++|+ +....-|
T Consensus 141 ~H-----yP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnr-e~G~TlVlVTHD-~~LA~Rc 213 (228)
T COG4181 141 TH-----YPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNR-ERGTTLVLVTHD-PQLAARC 213 (228)
T ss_pred cc-----CccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhh-hcCceEEEEeCC-HHHHHhh
Confidence 54 4567999999999999999999999999999999999999999999987766 456666667766 5677889
Q ss_pred CeEEEEcCCeEEE
Q 001293 393 DDIILLSDGQIVY 405 (1106)
Q Consensus 393 D~iilL~~G~iv~ 405 (1106)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
No 449
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=9.5e-34 Score=312.35 Aligned_cols=173 Identities=24% Similarity=0.294 Sum_probs=134.8
Q ss_pred eeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCcccccceEEEEccCCCCCCCCCHHHHHH
Q 001293 884 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 963 (1106)
Q Consensus 884 L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~~tv~e~l~ 963 (1106)
|.-=.++|..||+++++||||-||||+.++|+|..+ +.+|. ..+ -.++|=||.-.-....||++.|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~~-------~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EED-------LKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Ccc-------ceEeecceeecCCCCCcHHHHHH
Confidence 333356788889999999999999999999999766 44665 111 13677788654446789998775
Q ss_pred HHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHH
Q 001293 964 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1043 (1106)
Q Consensus 964 ~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~ 1043 (1106)
-...-+.. ...+..++++-++|+++.++.+ .+|||||.|||+||.+|.+++++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~-------~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFG-------SSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhcc-------cchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 33221111 1123467889999999998874 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1044 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1044 ~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
-.+-+.||+... .++|.+++-||..+ +--.+||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999999874 47999999999864 555678887764
No 450
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=320.73 Aligned_cols=220 Identities=23% Similarity=0.283 Sum_probs=177.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 931 (1106)
.+.++||+++|+ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+..|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478899998874 24699999999999999999999999999999999997642 14689999999
Q ss_pred ccCCc----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 001293 932 YPKKQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1106)
Q Consensus 932 ~~~~~----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~ 1007 (1106)
.++.. ..+++.++|++|++.+++ .|++||+.+...... ....++....+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87542 234567999999988777 899999987643221 12333334456778899988643211111 12467
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
||||||||++|||+|+.+|++|+|||||+|||+.+++.+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 589999999987 57889999999986 689
Q ss_pred EEecCCC
Q 001293 1088 IYVGPLG 1094 (1106)
Q Consensus 1088 ~~~g~~g 1094 (1106)
++.|+..
T Consensus 241 ~~~g~~~ 247 (276)
T PRK14271 241 VEEGPTE 247 (276)
T ss_pred EEeCCHH
Confidence 9988854
No 451
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=2.1e-34 Score=320.23 Aligned_cols=224 Identities=25% Similarity=0.331 Sum_probs=178.2
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++||++.++... ..|. ..++.+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888887764100 0000 013569999999999999999999999999999999999765 46899999998754
Q ss_pred cc------cccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCC
Q 001293 936 QE------TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 1006 (1106)
Q Consensus 936 ~~------~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~ 1006 (1106)
.. ..++.++|++|++. +.+..|+.|++.+..... ...........++++++.+++. ...+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 21 24567999999973 556789999987653211 1122334445688999999996 455554 45
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
.||+|||||++|||+|+.+|+||||||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.||++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999987 57788999999985 6
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 899998864
No 452
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.8e-35 Score=309.98 Aligned_cols=199 Identities=23% Similarity=0.297 Sum_probs=165.0
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++ +..+|+|+||+|++|+++||+|+||||||||+++|+|..+ +..|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45677776653 2469999999999999999999999999999999999866 46899999998754
Q ss_pred c--ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHH
Q 001293 936 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1013 (1106)
Q Consensus 936 ~--~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqr 1013 (1106)
. ..+++.++|++|++.+++.+|+.||+.+....+.. ..++.++++++.+++.+..+.. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~~------~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHGP------GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcCc------cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 23456799999998888889999999887533211 1234578899999998776654 357999999
Q ss_pred HHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEE
Q 001293 1014 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1081 (1106)
Q Consensus 1014 qrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l 1081 (1106)
||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999986 354433566555
No 453
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.8e-34 Score=305.23 Aligned_cols=170 Identities=41% Similarity=0.673 Sum_probs=148.0
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCceeEEEEcCccCCCCcccceEEEEcCCCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 45999999999999999999999999999999999999 887 9999999998765334577999999988889999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999764210 0
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCh-hHHHhhcCeEEEEcCC
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPA-PETYDLFDDIILLSDG 401 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~-~~~~~~~D~iilL~~G 401 (1106)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.. .+.|+|+ ++|+. .++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 4999999999999999999999999999999999999999999998754 3555555 55555 4788899999999999
Q ss_pred eEEEEc
Q 001293 402 QIVYQG 407 (1106)
Q Consensus 402 ~iv~~G 407 (1106)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 454
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-35 Score=311.31 Aligned_cols=201 Identities=25% Similarity=0.307 Sum_probs=180.9
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc-------ccccceEEEEccCCCCC
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHS 953 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~ 953 (1106)
..-++|+||+|+.||++.|||-||||||||+++|.++.. +..|+|.++|.++.. ...++.++.|+|+..++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 456899999999999999999999999999999999887 578999999988643 12345799999999999
Q ss_pred CCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeC
Q 001293 954 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1033 (1106)
Q Consensus 954 ~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDE 1033 (1106)
|..||.||+.|+..++. ++++++++.+.++++.+||.++.+.. +.+||||+||||.|||||+.+|+||+|||
T Consensus 119 PhrtVl~Nv~fGLev~G---v~~~er~~~a~~~l~~VgL~~~~~~y-----p~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 119 PHRTVLENVAFGLEVQG---VPKAEREERALEALELVGLEGYADKY-----PNELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred cchhHhhhhhcceeecC---CCHHHHHHHHHHHHHHcCchhhhhcC-----cccccchHHHHHHHHHHHccCCCEEEecC
Confidence 99999999999987664 56788889999999999999999887 46799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCC
Q 001293 1034 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1093 (1106)
Q Consensus 1034 PtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~ 1093 (1106)
|+|.|||--+..+++.|.++.++ .+|||++|||++ |.++..|||.+|+ +|++|..|..
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp 249 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTP 249 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCH
Confidence 99999999999999998888644 899999999998 7899999999998 5799999974
No 455
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=316.53 Aligned_cols=210 Identities=22% Similarity=0.351 Sum_probs=163.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 499999999999999999999999999999999998753 111389999999987531 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ +||+||+.++....+.... + .....++.+++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-K--------------------------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999987543321100 0 00122445566776642211111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+. +|+.++|+..++.+.+|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~-tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KDY-TIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cCC-eEEEEEeCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999873 344 5555777888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 456
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=316.77 Aligned_cols=216 Identities=24% Similarity=0.296 Sum_probs=173.1
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1106)
.+.++|+++.++ ++.+|+|+||+|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 367889987764 2469999999999999999999999999999999999643 1 12479999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.. ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~--- 145 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES--- 145 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC---
Confidence 87632 234567999999988877 6999999886433321 112222345667788887642 22222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 146 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14255 146 --ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 589999999987 5778899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |+++..|+..
T Consensus 222 ~-G~i~~~~~~~ 232 (252)
T PRK14255 222 T-GNLIEFADTK 232 (252)
T ss_pred C-CEEEEeCCHH
Confidence 6 5888888753
No 457
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=6.9e-35 Score=358.32 Aligned_cols=256 Identities=23% Similarity=0.353 Sum_probs=188.2
Q ss_pred HhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhhhc
Q 001293 79 QERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRII 158 (1106)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 158 (1106)
++....++|+.++.+.+++. .+..+....+.+..+++|+|+++.++.
T Consensus 300 ~~~~~~~~ri~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~~~v~~~y~~---------------------------- 346 (585)
T TIGR01192 300 FEARAKLEDFFDLEDSVFQR-----EEPADAPELPNVKGAVEFRHITFEFAN---------------------------- 346 (585)
T ss_pred HHHHHHHHHHHHHHcCCccc-----cCCccCCCCCCCCCeEEEEEEEEECCC----------------------------
Confidence 45566677777666544320 000000011112346999999998731
Q ss_pred CCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcCCC
Q 001293 159 PSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD 235 (1106)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d 235 (1106)
+ .++|+|+|+.+++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++.+... ++.++||+|++
T Consensus 347 --~---~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~ 418 (585)
T TIGR01192 347 --S---SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQDA 418 (585)
T ss_pred --C---CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccCC
Confidence 1 23899999999999999999999999999999999999998 9999999998876543 46899999987
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.++ +.|++|||.++.. ....+...++++.. + .+.. ...+++..||.
T Consensus 419 ~lf-~~ti~~Ni~~~~~----~~~~~~~~~a~~~~---~------------------------~~~~--i~~l~~g~~t~ 464 (585)
T TIGR01192 419 GLF-NRSIRENIRLGRE----GATDEEVYEAAKAA---A------------------------AHDF--ILKRSNGYDTL 464 (585)
T ss_pred ccC-cccHHHHHhcCCC----CCCHHHHHHHHHHh---C------------------------cHHH--HHhccccccch
Confidence 655 5799999988631 11111111111110 0 0111 12356677899
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
+|+.+ ..||||||||++|||||+.+|++++||||||+||+.++..+.+.|++.. .++|+|+ ++|..+. ...||+|
T Consensus 465 ~~~~~-~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~--~~~tvI~-isH~~~~-~~~~d~i 539 (585)
T TIGR01192 465 VGERG-NRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR--KNRTTFI-IAHRLST-VRNADLV 539 (585)
T ss_pred hcCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh--CCCEEEE-EEcChHH-HHcCCEE
Confidence 98764 5799999999999999999999999999999999999999999998753 3455555 5555544 4679999
Q ss_pred EEEcCCeEEEEcChHHHHH
Q 001293 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|+++..|+++++.+
T Consensus 540 ~~l~~G~i~~~g~~~~l~~ 558 (585)
T TIGR01192 540 LFLDQGRLIEKGSFQELIQ 558 (585)
T ss_pred EEEECCEEEEECCHHHHHH
Confidence 9999999999999998864
No 458
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=319.65 Aligned_cols=210 Identities=25% Similarity=0.330 Sum_probs=167.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCCc----ccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV----PQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|++|++|++++|+|||||||||||++|+|+++|. ...+|+|.++|.++.+.. .++.++|++|++.+++
T Consensus 35 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~~ 114 (276)
T PRK14271 35 TVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFP 114 (276)
T ss_pred EEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccCC
Confidence 5999999999999999999999999999999999998851 012899999998875431 2467999999887777
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
+||+||+.++...... ... .+....+..+++.+||....++.. +.
T Consensus 115 -~tv~eni~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~~ 159 (276)
T PRK14271 115 -MSIMDNVLAGVRAHKL-VPR--------------------------------KEFRGVAQARLTEVGLWDAVKDRL-SD 159 (276)
T ss_pred -ccHHHHHHHHHHhccC-CCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-hC
Confidence 8999999886432110 000 001112455677888865432222 23
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
.+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.. . ++|+.++|+..++.+++|++++|+
T Consensus 160 ~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l~ 236 (276)
T PRK14271 160 SPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALFF 236 (276)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4567999999999999999999999999999999999999999999998753 3 456667888889999999999999
Q ss_pred CCeEEEEcChHHHH
Q 001293 400 DGQIVYQGPRELVL 413 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1106)
+|++++.|+++++.
T Consensus 237 ~G~i~~~g~~~~~~ 250 (276)
T PRK14271 237 DGRLVEEGPTEQLF 250 (276)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999998874
No 459
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=320.04 Aligned_cols=211 Identities=29% Similarity=0.387 Sum_probs=167.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----CCceeEEEEcCccCCCCcc---cceEEEEcCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT-----LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNH 237 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~ 237 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++..
T Consensus 15 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~~ 94 (272)
T PRK13547 15 AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQP 94 (272)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCCC
Confidence 4999999999999999999999999999999999999874 1137999999998754322 3468999998776
Q ss_pred CCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccc
Q 001293 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1106)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1106)
++.+||+||+.++...... ...... .+....++.+++.+||+...++.
T Consensus 95 ~~~~tv~e~l~~~~~~~~~--~~~~~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 142 (272)
T PRK13547 95 AFAFSAREIVLLGRYPHAR--RAGALT----------------------------HRDGEIAWQALALAGATALVGRD-- 142 (272)
T ss_pred CCCCcHHHHHhhccccccc--ccccCC----------------------------HHHHHHHHHHHHHcCcHhhhcCC--
Confidence 6779999999875311000 000000 00112356788899998655544
Q ss_pred cccccCCChhhhHHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHH
Q 001293 318 DEMIRGISGGQKKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1106)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~---------~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~ 388 (1106)
+..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+..+ ++|+.++|+..++
T Consensus 143 ---~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tviiisH~~~~~ 218 (272)
T PRK13547 143 ---VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLAIVHDPNLA 218 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHH
Confidence 4569999999999999999 59999999999999999999999999998765324 4555577888889
Q ss_pred HhhcCeEEEEcCCeEEEEcChHHH
Q 001293 389 YDLFDDIILLSDGQIVYQGPRELV 412 (1106)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~ 412 (1106)
.+++|++++|++|++++.|+.+++
T Consensus 219 ~~~~d~i~~l~~G~i~~~g~~~~~ 242 (272)
T PRK13547 219 ARHADRIAMLADGAIVAHGAPADV 242 (272)
T ss_pred HHhCCEEEEEECCeEEEecCHHHH
Confidence 899999999999999999998876
No 460
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.7e-34 Score=349.60 Aligned_cols=220 Identities=22% Similarity=0.340 Sum_probs=180.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.|+ +..+|+||||+|++|+++||+|+||||||||+++|+|...+++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56788887763 24699999999999999999999999999999999997653235899999998764
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCC-CCChHHHHHHHHHHHHHcCCcccc-ccccCCCCCCCCC
Q 001293 936 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLS 1009 (1106)
Q Consensus 936 ~~----~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~-~~~~~~~~~~v~~~l~~~~l~~~~-~~~~g~~g~~~LS 1009 (1106)
.. ..++.+||++|++.+++.+||+||+.+....+... ....+..++.++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 31 12356999999998888999999998864322111 122333445688899999997653 333 35799
Q ss_pred HHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1010 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1010 gGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||||+||+||+.+|+||||||||+|||+.++..+++.|++++++|+|||++|||++ ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999987 57788999999987 58888
Q ss_pred ecCCCC
Q 001293 1090 VGPLGR 1095 (1106)
Q Consensus 1090 ~g~~g~ 1095 (1106)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 887653
No 461
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.4e-34 Score=350.36 Aligned_cols=211 Identities=21% Similarity=0.308 Sum_probs=180.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.|+ ++.+|+|+||+|++|+++||+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 378899988874 2369999999999999999999999999999999999865 4689999999875
Q ss_pred Ccc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCH
Q 001293 935 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~~---~-~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSg 1010 (1106)
... . .++.+||++|++.+++.+||+||+.|... . .+..++.+.++++.+++.+..+.. +.+|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSS-----AGSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCC-----hhhCCH
Confidence 431 1 23469999999988899999999987531 1 122345678899999998777665 357999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEe
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1090 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~ 1090 (1106)
||||||+|||||+.+|++|||||||+|||+.++..+++.|++++++|+|||++|||++ ++.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999878999999999987 57788999999986 588888
Q ss_pred cCCC
Q 001293 1091 GPLG 1094 (1106)
Q Consensus 1091 g~~g 1094 (1106)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 8754
No 462
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=349.62 Aligned_cols=215 Identities=27% Similarity=0.341 Sum_probs=179.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++++|+++.|+ +..+|+||||++++|++++|+|+||||||||+++|+|... +..|+|.++|.++.
T Consensus 5 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~ 69 (501)
T PRK11288 5 LSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEMR 69 (501)
T ss_pred EEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 77889988774 2469999999999999999999999999999999999865 46899999998754
Q ss_pred c----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHH
Q 001293 936 Q----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1011 (1106)
Q Consensus 936 ~----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgG 1011 (1106)
. ..+++.+||++|++.+++.+||+||+.+..........+..+.++.+.++++.+++.+..+.. +.+||||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG 144 (501)
T PRK11288 70 FASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSIG 144 (501)
T ss_pred CCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCHH
Confidence 2 124567999999998888999999999853211111122334455688999999997666554 4579999
Q ss_pred HHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1012 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1012 qrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
||||++|||+|+.+|++|||||||+|||+.++..+++.|+++.++|+|||++||+++ ++...||++++|++ |+++..+
T Consensus 145 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~ 222 (501)
T PRK11288 145 QRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATF 222 (501)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeec
Confidence 999999999999999999999999999999999999999999878999999999987 57788999999987 5777655
Q ss_pred C
Q 001293 1092 P 1092 (1106)
Q Consensus 1092 ~ 1092 (1106)
+
T Consensus 223 ~ 223 (501)
T PRK11288 223 D 223 (501)
T ss_pred C
Confidence 4
No 463
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=321.39 Aligned_cols=213 Identities=22% Similarity=0.269 Sum_probs=173.3
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC---CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 931 (1106)
.+.++++++.|. +..+|+|+||+|++|++++|+|+||||||||+++|+|...+ .+..|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478999988774 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc----ccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~----~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++. |+.||+.+....+.. .. .....++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~---~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGY---DG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCC---cH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2346789999999877775 999999886543321 11 23456788999998853 23332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEE-EE
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1081 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~-~l 1081 (1106)
+..||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 467999999999999999999999999999999999999999999999976 489999999987 5778899975 56
Q ss_pred ecCCEEEEecCC
Q 001293 1082 KRGGQEIYVGPL 1093 (1106)
Q Consensus 1082 ~~Gg~~~~~g~~ 1093 (1106)
++ |+++..|+.
T Consensus 254 ~~-G~i~~~g~~ 264 (285)
T PRK14254 254 TG-GELVEFDDT 264 (285)
T ss_pred eC-CEEEEeCCH
Confidence 65 688888874
No 464
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.2e-34 Score=313.95 Aligned_cols=210 Identities=22% Similarity=0.353 Sum_probs=169.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++|+++.++ ++++|+|+||+|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899988763 2369999999999999999999999999999999999765 5689999999765
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc-cccccccCCCCCCCCCH
Q 001293 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1010 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~~~LSg 1010 (1106)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .. ....++++++.+++. ...+.. +..||+
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 32 234567999999988776 5999999876433221 11 124467899999995 355544 457999
Q ss_pred HHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCeEEEEecCccHHHHHhcCeEEEEecCCEEEE
Q 001293 1011 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1089 (1106)
Q Consensus 1011 Gqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~ 1089 (1106)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|.|||++||+++ ++ +.||++++|++.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEecccchHh
Confidence 999999999999999999999999999999999999999999865 4899999999987 35 56999999963333444
Q ss_pred ecC
Q 001293 1090 VGP 1092 (1106)
Q Consensus 1090 ~g~ 1092 (1106)
.|.
T Consensus 219 ~~~ 221 (225)
T PRK10247 219 EAR 221 (225)
T ss_pred hhh
Confidence 443
No 465
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=7.3e-35 Score=360.09 Aligned_cols=211 Identities=22% Similarity=0.357 Sum_probs=178.9
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1106)
...++|+||+|.|+. +.++|+|+|++++|||++||+|+||||||||+++|+|..+ +..|+|.+||.
T Consensus 338 ~~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~ 403 (592)
T PRK10790 338 SGRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGR 403 (592)
T ss_pred CCeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCE
Confidence 356999999999852 1358999999999999999999999999999999999876 46899999998
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccc-------ccCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGL 1002 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~g~ 1002 (1106)
++.+ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+++.+..+. .+|.
T Consensus 404 ~i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e 472 (592)
T PRK10790 404 PLSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGE 472 (592)
T ss_pred EhhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccC
Confidence 8653 4678899999999998875 9999998852 122 2347888899888764433 3333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+...||||||||++|||||+++|+||+||||||+||+++++.|++.|+++.. ++|+|++||+++ ....||++++|+
T Consensus 473 -~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~ 548 (592)
T PRK10790 473 -QGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLH 548 (592)
T ss_pred -CCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEE
Confidence 3357999999999999999999999999999999999999999999998864 699999999985 566799999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++..|+.
T Consensus 549 ~-G~i~~~G~~ 558 (592)
T PRK10790 549 R-GQAVEQGTH 558 (592)
T ss_pred C-CEEEEEcCH
Confidence 6 699998884
No 466
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-34 Score=315.60 Aligned_cols=207 Identities=24% Similarity=0.345 Sum_probs=163.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+.|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14272 18 QAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNPF 97 (252)
T ss_pred EeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCccC
Confidence 59999999999999999999999999999999999987631 1379999999887531 1245799999999899
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----ccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1106)
+.+|++||+.++....+.... +. ....++..++.+++. +..++
T Consensus 98 ~~~t~~enl~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~l~~~l~~~~~~ 144 (252)
T PRK14272 98 PTMSVFDNVVAGLKLAGIRDR-DH--------------------------------LMEVAERSLRGAALWDEVKDRLKT 144 (252)
T ss_pred cCCCHHHHHHHHHHhcCCCCH-HH--------------------------------HHHHHHHHHHHcCcchhhhhhhcC
Confidence 999999999876533211000 00 011223344555543 22333
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
.++.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+.+|+
T Consensus 145 -----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~ 216 (252)
T PRK14272 145 -----PATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK--KV-TTIIIVTHNMHQAARVSDT 216 (252)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 24 5556677888889999999
Q ss_pred EEEEcCCeEEEEcChHHHH
Q 001293 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1106)
|++|++|++++.|+++++.
T Consensus 217 i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 217 TSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999998874
No 467
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=318.50 Aligned_cols=210 Identities=21% Similarity=0.316 Sum_probs=164.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+.|++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 4899999999999999999999999999999999998740 01289999999987531 1246799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+. ||+||+.+.....+.... + ..+..++++++.+++.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINNR-R--------------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 999999887543321000 0 00112455677777753211122 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.. +. +|+.++|+..++.+.||+|++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~~-tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--KY-TIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEeCCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 34 4555778888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988763
No 468
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.5e-34 Score=316.16 Aligned_cols=206 Identities=27% Similarity=0.408 Sum_probs=158.2
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEM 241 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 241 (1106)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 35999999999999999999999999999999999999998 999999998765432 245799999987665 57
Q ss_pred CHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHc--CCccccccccccc
Q 001293 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL--GLDVCADTMVGDE 319 (1106)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 319 (1106)
||+||+.+... . ...+...+.. .. ...+..++.+ |++...+ .
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~~~~---~~------------------------~~~~~~l~~l~~~~~~~~~-----~ 134 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVIEAA---KL------------------------AGAHDFISELPEGYDTIVG-----E 134 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHHHHH---HH------------------------cCcHHHHHhCcccccchhh-----c
Confidence 99999987531 1 1111111100 00 0112334444 4433233 3
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
.+..|||||||||+||||++.+|++++|||||+|||+.+...+.+.|+++. .+.| |+.++|+..++ ..||++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~t-iii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--AGRT-VIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCE-EEEEeCCHHHH-HhCCEEEEEE
Confidence 456799999999999999999999999999999999999999999999874 3445 55566676776 4699999999
Q ss_pred CCeEEEEcChHHHHH
Q 001293 400 DGQIVYQGPRELVLE 414 (1106)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1106)
+|++++.|+.+++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999887653
No 469
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=314.76 Aligned_cols=210 Identities=19% Similarity=0.271 Sum_probs=164.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++||+|++.++
T Consensus 18 ~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 97 (251)
T PRK14249 18 QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPF 97 (251)
T ss_pred eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCccC
Confidence 49999999999999999999999999999999999998741 1259999999886432 1246799999998878
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+. ||+||+.|+....+.... + + ....++..++.+||.+...... +
T Consensus 98 ~~-tv~enl~~~~~~~~~~~~-~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~~-~ 142 (251)
T PRK14249 98 PK-SIFDNVAFGPRMLGTTAQ-S---R-----------------------------LDEVVEKSLRQAALWDEVKDNL-H 142 (251)
T ss_pred cC-cHHHHHhhHHHhcCCChh-h---H-----------------------------HHHHHHHHHHHhCCchhhhhHh-h
Confidence 75 999999987543221100 0 0 0112344556666643211111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+.+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+..++.+.+|++++|
T Consensus 143 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tilivsh~~~~~~~~~d~i~~l 219 (251)
T PRK14249 143 KSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK--QN-YTIAIVTHNMQQAARASDWTGFL 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHhhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999873 33 45666788889999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 220 LTGDLVEYGRTGEIF 234 (251)
T ss_pred eCCeEEEeCCHHHHH
Confidence 999999999998764
No 470
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=319.89 Aligned_cols=216 Identities=21% Similarity=0.211 Sum_probs=173.3
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 931 (1106)
.+.++|+++.|+. ..+|+|+||+|++|+++||+|+||||||||+++|+|... + .+..|+|.++|
T Consensus 24 ~l~~~~l~~~~~~-------------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYGE-------------DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEECC-------------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 4889999887741 358999999999999999999999999999999999753 1 13689999999
Q ss_pred ccCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCc----cccccccCC
Q 001293 932 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 1002 (1106)
Q Consensus 932 ~~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~----~~~~~~~g~ 1002 (1106)
.++.. ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..+..+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87632 234567999999988776 599999988653221 111222334566777776542 222222
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
+..||||||||++|||+|+.+|+||||||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 799999999987 4778899999998
Q ss_pred cCCEEEEecCCC
Q 001293 1083 RGGQEIYVGPLG 1094 (1106)
Q Consensus 1083 ~Gg~~~~~g~~g 1094 (1106)
+ |++++.|+..
T Consensus 241 ~-G~i~~~g~~~ 251 (271)
T PRK14238 241 N-GYVNEYDDTD 251 (271)
T ss_pred C-CEEEEeCCHH
Confidence 6 5888888754
No 471
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.1e-35 Score=361.19 Aligned_cols=214 Identities=22% Similarity=0.316 Sum_probs=178.9
Q ss_pred CceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCc
Q 001293 853 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 932 (1106)
Q Consensus 853 p~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 932 (1106)
+..++++||+|.|+. .+.++|+|+|++|+||+++||+|+||||||||+++|+|..+ +..|+|.+||.
T Consensus 339 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~ 405 (582)
T PRK11176 339 KGDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGH 405 (582)
T ss_pred CCeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCE
Confidence 347999999999852 22469999999999999999999999999999999999876 56899999999
Q ss_pred cCCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccc-------ccccCC
Q 001293 933 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGL 1002 (1106)
Q Consensus 933 ~~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~-------~~~~g~ 1002 (1106)
+..+ ..+++.++||||++.+++ .|++||+.++. +.+.+ ++.++++++.+++.+.. |..+|.
T Consensus 406 ~i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~ 476 (582)
T PRK11176 406 DLRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGE 476 (582)
T ss_pred EhhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCC
Confidence 8654 456788999999998876 69999998752 11122 33477788888876543 344554
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEe
Q 001293 1003 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1082 (1106)
Q Consensus 1003 ~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~ 1082 (1106)
. ...||||||||++|||||+++|+||+||||||+||++++..+++.++++. +++|+|++||+++ ..+.||+|++|+
T Consensus 477 ~-g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~ 552 (582)
T PRK11176 477 N-GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVE 552 (582)
T ss_pred C-CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEE
Confidence 3 36799999999999999999999999999999999999999999999875 4799999999985 567899999998
Q ss_pred cCCEEEEecCC
Q 001293 1083 RGGQEIYVGPL 1093 (1106)
Q Consensus 1083 ~Gg~~~~~g~~ 1093 (1106)
+ |+++..|+.
T Consensus 553 ~-g~i~e~g~~ 562 (582)
T PRK11176 553 D-GEIVERGTH 562 (582)
T ss_pred C-CEEEEeCCH
Confidence 6 689998883
No 472
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=300.12 Aligned_cols=168 Identities=27% Similarity=0.417 Sum_probs=148.7
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
.++|+++.++ ...+|+|+||++++||+++|+|+||||||||+++|+|... +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEccc
Confidence 4677776653 1358999999999999999999999999999999999865 468999999987543
Q ss_pred --ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHH
Q 001293 937 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1014 (1106)
Q Consensus 937 --~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrq 1014 (1106)
..+++.++|++|++.+++..|+.||+. ||+||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567999999998888889998863 8999999
Q ss_pred HHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecC
Q 001293 1015 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1084 (1106)
Q Consensus 1015 rl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~G 1084 (1106)
|++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999987 577789999999976
No 473
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=316.07 Aligned_cols=209 Identities=22% Similarity=0.326 Sum_probs=163.3
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCC-C---cccceEEEEcCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDE-F---VPQRTAAYISQHDNHIG 239 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~~~~ 239 (1106)
++|+|+|+.|++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|.++.. . ..++.++|++|++.+++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 96 (249)
T PRK14253 17 QALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPFP 96 (249)
T ss_pred eeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcCc
Confidence 49999999999999999999999999999999999987520 128999999987642 1 12457999999988777
Q ss_pred CCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccccccc
Q 001293 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1106)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1106)
.||+||+.++....+.... + .....++..++.+|+.+...... +.
T Consensus 97 -~tv~~~l~~~~~~~~~~~~-----~----------------------------~~~~~~~~~~~~~~l~~~~~~~~-~~ 141 (249)
T PRK14253 97 -MSIYENVAYGLRAQGIKDK-----K----------------------------VLDEVVERSLRGAALWDEVKDRL-KS 141 (249)
T ss_pred -ccHHHHHHhHHHhcCCCch-----H----------------------------HHHHHHHHHHHHcCCchhhhHHh-hc
Confidence 8999999887543211000 0 00112344566666643221111 23
Q ss_pred cccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEc
Q 001293 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1106)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1106)
....|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++.+ + ++|+.++|+..++.+.+|++++|+
T Consensus 142 ~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l~ 218 (249)
T PRK14253 142 HAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFFL 218 (249)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999998753 3 455667778889999999999999
Q ss_pred CCeEEEEcChHHH
Q 001293 400 DGQIVYQGPRELV 412 (1106)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1106)
+|++++.|+.+++
T Consensus 219 ~G~i~~~g~~~~~ 231 (249)
T PRK14253 219 MGELVEHDDTQVI 231 (249)
T ss_pred CCEEEEeCCHHHH
Confidence 9999999998775
No 474
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=318.61 Aligned_cols=219 Identities=19% Similarity=0.237 Sum_probs=173.4
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--C-eeeeEEEEcC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 931 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 931 (1106)
.+.++||+++++ +..+|+|+||+|++||++||+|+||||||||+++|+|.... . +..|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478899988774 23689999999999999999999999999999999996431 1 2579999999
Q ss_pred ccCC-----cccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCC
Q 001293 932 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 932 ~~~~-----~~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~ 1006 (1106)
.++. ...+++.++|++|++.+++ .|+.||+.+....+. .. ...++.+.++++.+++.+........ .+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQ-SGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcC-Ccc
Confidence 8752 1234567999999988777 599999988653321 11 12234466778887774311111111 145
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec---
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1083 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~--- 1083 (1106)
.||||||||++|||||+.+|+||||||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999865 589999999987 58899999999982
Q ss_pred -----CCEEEEecCCC
Q 001293 1084 -----GGQEIYVGPLG 1094 (1106)
Q Consensus 1084 -----Gg~~~~~g~~g 1094 (1106)
.|++++.|+..
T Consensus 229 ~~~~~~g~i~~~~~~~ 244 (264)
T PRK14243 229 EGGGRYGYLVEFDRTE 244 (264)
T ss_pred cccccCceEEEeCCHH
Confidence 46999998853
No 475
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.4e-35 Score=389.07 Aligned_cols=257 Identities=19% Similarity=0.245 Sum_probs=195.7
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhh-cCC-CCC-cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHH
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDR-VGI-DLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1106)
.+....++||+.++.+.++|.- ...+. ... .-| ..+|+|+||++.|..
T Consensus 1196 ~~~~~~s~eRi~e~~~~~~e~~-----~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~------------------------ 1246 (1495)
T PLN03232 1196 AENSLNSVERVGNYIDLPSEAT-----AIIENNRPVSGWPSRGSIKFEDVHLRYRP------------------------ 1246 (1495)
T ss_pred HHHHHHHHHHHHHHhcCCcccc-----ccccCCCCCCCCCCCCcEEEEEEEEEECC------------------------
Confidence 4566788899999887665510 00000 001 112 357999999999832
Q ss_pred hhhcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEE
Q 001293 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1106)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1106)
...++|+|+|++|+|||.++|+||+|||||||+++|.|+++|+ +|+|.+||.++.+... ++.++||
T Consensus 1247 --------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~IdG~di~~i~~~~lR~~i~iV 1315 (1495)
T PLN03232 1247 --------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELE---KGRIMIDDCDVAKFGLTDLRRVLSII 1315 (1495)
T ss_pred --------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCC---CceEEECCEEhhhCCHHHHHhhcEEE
Confidence 1134999999999999999999999999999999999999998 9999999999887654 5789999
Q ss_pred cCCCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccc
Q 001293 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1106)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1106)
+|++.+|. .||||||.++.. ...+.+.++.++ +++ ... .-.+++.
T Consensus 1316 pQdp~LF~-gTIr~NL~~~~~-----~sdeei~~al~~---a~l------------------------~~~--I~~lp~G 1360 (1495)
T PLN03232 1316 PQSPVLFS-GTVRFNIDPFSE-----HNDADLWEALER---AHI------------------------KDV--IDRNPFG 1360 (1495)
T ss_pred CCCCeeeC-ccHHHHcCCCCC-----CCHHHHHHHHHH---cCC------------------------HHH--HHhCcCC
Confidence 99887665 699999986421 112222222221 111 111 1246778
Q ss_pred cccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001293 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1106)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1106)
.||.||+.+. .||||||||++|||||+++|+||+||||||+||+.+...|.+.|++.. .++| +|++.|.. ++...
T Consensus 1361 Ldt~v~e~G~-~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~--~~~T-vI~IAHRl-~ti~~ 1435 (1495)
T PLN03232 1361 LDAEVSEGGE-NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF--KSCT-MLVIAHRL-NTIID 1435 (1495)
T ss_pred CCceecCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CCCE-EEEEeCCH-HHHHh
Confidence 8999998655 699999999999999999999999999999999999999999998752 3445 44566654 56667
Q ss_pred cCeEEEEcCCeEEEEcChHHHHH
Q 001293 392 FDDIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1106)
||+|++|++|+|+++|+++++++
T Consensus 1436 ~DrIlVL~~G~ivE~Gt~~eLl~ 1458 (1495)
T PLN03232 1436 CDKILVLSSGQVLEYDSPQELLS 1458 (1495)
T ss_pred CCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999864
No 476
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=315.26 Aligned_cols=210 Identities=20% Similarity=0.330 Sum_probs=163.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++||+++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14251 18 EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPF 97 (251)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccC
Confidence 49999999999999999999999999999999999986 2111289999999886431 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ .||+||+.++....+.... + .....++.+++.++|........ +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14251 98 P-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDNL-D 142 (251)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHHh-c
Confidence 5 7999999886543221100 0 00112455677778742110111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..||||||||++|||||+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|+..++.+++|+|++|
T Consensus 143 ~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 219 (251)
T PRK14251 143 RNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK--HQ-YTFIMVTHNLQQAGRISDQTAFL 219 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH--cC-CeEEEEECCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 23 45666788888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|+++..|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 220 MNGDLIEAGPTEEMF 234 (251)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 477
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-35 Score=294.81 Aligned_cols=216 Identities=25% Similarity=0.389 Sum_probs=185.1
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
++.+||+++|. .+.+|+++|+.|++|.+++|+|||||||||||.+++++.. ..+|+|.++|.++.
T Consensus 2 I~i~nv~K~y~-------------~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~ 66 (252)
T COG4604 2 ITIENVSKSYG-------------TKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELT 66 (252)
T ss_pred eeehhhhHhhC-------------CEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecc
Confidence 34567776663 5689999999999999999999999999999999998765 56899999999865
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHH
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1012 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGq 1012 (1106)
. ..+++.+..+-|+......+||+|-+.|+..-........ +.+..++++++.++|.++.++. ..+|||||
T Consensus 67 ~~~s~~LAk~lSILkQ~N~i~~rlTV~dLv~FGRfPYSqGRlt~-eD~~~I~~aieyl~L~~l~dry-----Ld~LSGGQ 140 (252)
T COG4604 67 STPSKELAKKLSILKQENHINSRLTVRDLVGFGRFPYSQGRLTK-EDRRIINEAIEYLHLEDLSDRY-----LDELSGGQ 140 (252)
T ss_pred cCChHHHHHHHHHHHhhchhhheeEHHHHhhcCCCcccCCCCch-HHHHHHHHHHHHhcccchHHHh-----HHhcccch
Confidence 3 4567778888888877778999999999864433333333 3456689999999999999987 35799999
Q ss_pred HHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEEEEecCCEEEEec
Q 001293 1013 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1091 (1106)
Q Consensus 1013 rqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g 1091 (1106)
|||.-||+.|+++.+.++||||.++||......+|+.+++++++ |+|||++.||.++ ...++|.|+-|++ |+++..|
T Consensus 141 rQRAfIAMVlaQdTdyvlLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G 218 (252)
T COG4604 141 RQRAFIAMVLAQDTDYVLLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQG 218 (252)
T ss_pred hhhhhhheeeeccCcEEEecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecC
Confidence 99999999999999999999999999999999999999999865 9999999999986 5667899999997 5999999
Q ss_pred CCC
Q 001293 1092 PLG 1094 (1106)
Q Consensus 1092 ~~g 1094 (1106)
+..
T Consensus 219 ~~~ 221 (252)
T COG4604 219 SPD 221 (252)
T ss_pred CHH
Confidence 865
No 478
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=315.00 Aligned_cols=211 Identities=21% Similarity=0.323 Sum_probs=165.7
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCCc-----ccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|++|++|++++|+||||||||||+++|+|..+ |+...+|+|+++|.++.... .++.++|++|++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 98 (251)
T PRK14244 19 QILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNPF 98 (251)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcccc
Confidence 59999999999999999999999999999999999976 21012899999998764321 246799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+. ||+||+.+.....+.....+ .....++.+++.+||.+...+.+ +
T Consensus 99 ~~-tv~~ni~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (251)
T PRK14244 99 PK-SIYDNVAYGPKLHGLAKNKK--------------------------------KLDEIVEKSLTSVGLWEELGDRL-K 144 (251)
T ss_pred cC-CHHHHHHHHHHhcCCCCCHH--------------------------------HHHHHHHHHHHHcCCCchhhhHh-h
Confidence 75 99999988643321100000 01123456788889865322222 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+||++|+.+|+++||||||+|||+.+...+.+.|+++. .+ .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 221 (251)
T PRK14244 145 DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKKVSDRVAFF 221 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999873 34 45555778888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|++++.|+++++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 222 QSGRIVEYNTTQEIF 236 (251)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 479
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=315.72 Aligned_cols=212 Identities=22% Similarity=0.297 Sum_probs=167.8
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|+..++
T Consensus 21 ~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~ 100 (261)
T PRK14258 21 KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLF 100 (261)
T ss_pred eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccC
Confidence 4999999999999999999999999999999999999873 12479999999886321 1245799999988777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ +||+||+.+.....+.... .+....+..+++.+++.+..+... +
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 145 (261)
T PRK14258 101 P-MSVYDNVAYGVKIVGWRPK---------------------------------LEIDDIVESALKDADLWDEIKHKI-H 145 (261)
T ss_pred c-ccHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCcchhhhHh-c
Confidence 7 8999999886532211000 000123456777888754222112 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+.+..||||||||++||++|+.+|++++|||||+|||+.+...+.+.|++++...+ ++|+.++|+..++.++||+|++|
T Consensus 146 ~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~-~tiiivsH~~~~i~~~~d~i~~l 224 (261)
T PRK14258 146 KSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSE-LTMVIVSHNLHQVSRLSDFTAFF 224 (261)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCC-CEEEEEECCHHHHHHhcCEEEEE
Confidence 34567999999999999999999999999999999999999999999998754334 45555778889999999999999
Q ss_pred cC-----CeEEEEcChHHHH
Q 001293 399 SD-----GQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~-----G~iv~~G~~~~~~ 413 (1106)
++ |+++++|+++++.
T Consensus 225 ~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 225 KGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred ccCCCcCceEEEeCCHHHHH
Confidence 99 9999999999874
No 480
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=319.25 Aligned_cols=203 Identities=21% Similarity=0.353 Sum_probs=162.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCC-----cccceEEEEcCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1106)
.+|+|+|+.|++|++++|+|||||||||||++|+|+.+ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 53 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 53 EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 49999999999999999999999999999999999854 35 99999999886432 1245799999998
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc----cc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VC 311 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~ 311 (1106)
.+++ .||+||+.|+....+.... + .....+..+++.+|+. +.
T Consensus 130 ~l~~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~l~~~ 175 (286)
T PRK14275 130 NPFP-KSIFDNIAYGPRLHGINDK-----K----------------------------QLEEIVEKSLRKAALWDEVSDR 175 (286)
T ss_pred CCCc-cCHHHHHHhHHHhcCCCcH-----H----------------------------HHHHHHHHHHHHhCCccchhhH
Confidence 7777 4999999987543221000 0 0011234556677763 22
Q ss_pred cccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhh
Q 001293 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1106)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1106)
.+ ..+..|||||||||+||+||+.+|++|||||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.++
T Consensus 176 ~~-----~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~~~~ 247 (286)
T PRK14275 176 LD-----KNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQASRV 247 (286)
T ss_pred hh-----CChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHh
Confidence 23 34457999999999999999999999999999999999999999999998743 3 4566678888899999
Q ss_pred cCeEEEEcCCeEEEEcChHHHH
Q 001293 392 FDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~ 413 (1106)
+|++++|++|++++.|+++++.
T Consensus 248 ~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 248 SDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988764
No 481
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=3.7e-34 Score=316.11 Aligned_cols=215 Identities=26% Similarity=0.280 Sum_probs=172.4
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc--
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP-- 933 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~-- 933 (1106)
+.++|+++.++ +..+|+|+||+|++|++++|+|+||||||||+++|+|... +.+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEeccccc
Confidence 67888887764 2358999999999999999999999999999999999876 468999999876
Q ss_pred ---CCc---c----cccceEEEEccCCC--CCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcc-cccccc
Q 001293 934 ---KKQ---E----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLV 1000 (1106)
Q Consensus 934 ---~~~---~----~~~~~~gyv~q~~~--~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~-~~~~~~ 1000 (1106)
... . ..++.++|++|++. +.+..|+.||+.+....... .........++++++.+++.+ ..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~l~~l~l~~~~~~~~- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGA--RHYGNIRAAAHDWLEEVEIDPTRIDDL- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcc--cchHHHHHHHHHHHHHcCCChhhhhcC-
Confidence 322 1 12356899999975 34557899998754321110 111123456788999999963 55544
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEecCccHHHHHhcCeEE
Q 001293 1001 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1079 (1106)
Q Consensus 1001 g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~H~~~~~~~~~~D~v~ 1079 (1106)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |.|||+++|++. ++.+.+|+++
T Consensus 146 ----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 146 ----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 4679999999999999999999999999999999999999999999998654 899999999987 5777899999
Q ss_pred EEecCCEEEEecCCC
Q 001293 1080 LMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1080 ~l~~Gg~~~~~g~~g 1094 (1106)
+|++ |++++.|+..
T Consensus 221 ~l~~-G~i~~~~~~~ 234 (253)
T TIGR02323 221 VMQQ-GRVVESGLTD 234 (253)
T ss_pred EEEC-CEEEEECCHH
Confidence 9986 6888988753
No 482
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=314.60 Aligned_cols=210 Identities=21% Similarity=0.306 Sum_probs=164.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
.+|+|+|+++++|++++|+||||||||||+++|+|..++. ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 99 (253)
T PRK14261 20 HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNPF 99 (253)
T ss_pred eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCccC
Confidence 4999999999999999999999999999999999987531 11279999999987543 1235799999998877
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ .||+||+.|+.+..+.... . .....++.+++.++|.+...+.. +
T Consensus 100 ~-~tv~eni~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 144 (253)
T PRK14261 100 P-KSIYENVAYGPRIHGEKNK-----K----------------------------TLDTIVEKSLKGAALWDEVKDRL-H 144 (253)
T ss_pred c-ccHHHHHHhhHHhcCCCCH-----H----------------------------HHHHHHHHHHHHhcCchhhHHHh-h
Confidence 7 4999999987543321000 0 00112445566777643211111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
...+.||||||||++|||+++.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.+.+|++++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~l 221 (253)
T PRK14261 145 DSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGFM 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998753 3 45555778888899999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|+++..|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 222 YLGKLIEFDKTTQIF 236 (253)
T ss_pred ECCEEEEcCCHHHHH
Confidence 999999999988763
No 483
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=6e-34 Score=314.30 Aligned_cols=221 Identities=24% Similarity=0.289 Sum_probs=175.0
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.+.++++++.++ +..+|+||||++++||++||+|+||||||||+++|+|.....+..|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 378899987764 2359999999999999999999999999999999999621125689999999875
Q ss_pred Ccc---cccc-eEEEEccCCCCCCCCCHHHHHHHHHhhcC-C---CCCChHHHHHHHHHHHHHcCCc-cccccccCCCCC
Q 001293 935 KQE---TFAR-ISGYCEQNDIHSPFVTIYESLLFSAWLRL-S---PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 1005 (1106)
Q Consensus 935 ~~~---~~~~-~~gyv~q~~~~~~~~tv~e~l~~~~~~r~-~---~~~~~~~~~~~v~~~l~~~~l~-~~~~~~~g~~g~ 1005 (1106)
... ...+ .++|++|++.+++.+|+.+++.+...... . .+.........+.++++.+++. ...+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 47899999988888999999876532111 0 1112222335577889999986 34444321
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHh-cCeEEEEecC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1084 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~-~D~v~~l~~G 1084 (1106)
..||||||||++||+||+.+|+||+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 249999999999999999999999999999999999999999999998877999999999986 35555 899999985
Q ss_pred CEEEEecCCC
Q 001293 1085 GQEIYVGPLG 1094 (1106)
Q Consensus 1085 g~~~~~g~~g 1094 (1106)
|++++.|+..
T Consensus 228 G~i~~~~~~~ 237 (252)
T CHL00131 228 GKIIKTGDAE 237 (252)
T ss_pred CEEEEecChh
Confidence 6999998764
No 484
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=347.70 Aligned_cols=205 Identities=25% Similarity=0.336 Sum_probs=172.2
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc----ccccceEEEEccCCCCCCCC
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDIHSPFV 956 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~~~~~~~ 956 (1106)
+++|+||||+|++|+++||+|+||||||||+++|+|... +.+|+|.++|.++.. ..+++.++|++|++.+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 469999999999999999999999999999999999865 468999999987542 12346799999998888889
Q ss_pred CHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCC
Q 001293 957 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1036 (1106)
Q Consensus 957 tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEPts 1036 (1106)
||+||+.+..........+.+...+.++++++.+++.+..+.. +.+|||||||||+||+||+.+|++|||||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAK-----VATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 9999998753211111112233345688899999998766655 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1037 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1037 gLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+.-
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 219 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLA 219 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChh
Confidence 99999999999999999878999999999987 57788999999986 5888888753
No 485
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-34 Score=312.75 Aligned_cols=210 Identities=20% Similarity=0.309 Sum_probs=161.9
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++|++++|+|||||||||||++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.++
T Consensus 19 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 98 (252)
T PRK14255 19 EALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNPF 98 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCccC
Confidence 49999999999999999999999999999999999865 3111289999999887421 1245799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ .||+||+.+.....+.... +. ....+...++.+++........ +
T Consensus 99 ~-~tv~~nl~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~l~~~i~~~~-~ 143 (252)
T PRK14255 99 P-FSIYENVIYGLRLAGVKDK-AV--------------------------------LDEAVETSLKQAAIWDEVKDHL-H 143 (252)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-HH--------------------------------HHHHHHHHHHHcCCccchhhHH-h
Confidence 7 7999999987543321100 00 0011233455565532111111 2
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.+.+|+|++|
T Consensus 144 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l 220 (252)
T PRK14255 144 ESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998743 3 45556788888999999999999
Q ss_pred cCCeEEEEcChHHHH
Q 001293 399 SDGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1106)
++|+++..|+..++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 221 LTGNLIEFADTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 486
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.3e-34 Score=312.93 Aligned_cols=209 Identities=26% Similarity=0.410 Sum_probs=167.6
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCC
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 935 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 935 (1106)
+.++|+++.++. ....+|+|+||+|++|++++|+||||||||||+++|+|... +..|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 667888776631 12358999999999999999999999999999999999865 46899999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccC------CCCCC
Q 001293 936 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVG------LPGVS 1006 (1106)
Q Consensus 936 ~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g------~~g~~ 1006 (1106)
. ..+++.++|++|++.+++ .|+.||+.+... ... ...+.++++.+++.+..+..+. .+.+.
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 234567999999987776 699999976421 111 1235678888888776665421 01235
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ +|||++||+++. . +.||++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~-~-~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL-L-DLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH-H-HhCCEEEEEeC-Ce
Confidence 79999999999999999999999999999999999999999999998764 899999999863 4 79999999987 57
Q ss_pred EEEec
Q 001293 1087 EIYVG 1091 (1106)
Q Consensus 1087 ~~~~g 1091 (1106)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 77654
No 487
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-34 Score=315.85 Aligned_cols=210 Identities=21% Similarity=0.275 Sum_probs=164.1
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCC-----cccceEEEEcCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1106)
++|+|+|+++++|++++|+|+|||||||||++|+|.++++. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 49999999999999999999999999999999999987521 1389999999887431 1235799999998777
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+ +||+||+.++....+.... .+....++.+++.+|+....... -+
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~-~~ 145 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLPQ---------------------------------ADLDEIVESALKGAALWQEVKDK-LN 145 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCcchhhhH-hc
Confidence 7 8999999887543210000 00112344566777763211111 12
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
..+..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+.+++.+++|++++|
T Consensus 146 ~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~i~~~~d~i~~l 222 (259)
T PRK14260 146 KSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS--E-LTIAIVTHNMQQATRVSDFTAFF 222 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 34567999999999999999999999999999999999999999999998742 3 45666788889999999999999
Q ss_pred c-----CCeEEEEcChHHHH
Q 001293 399 S-----DGQIVYQGPRELVL 413 (1106)
Q Consensus 399 ~-----~G~iv~~G~~~~~~ 413 (1106)
+ +|+++++|+++++.
T Consensus 223 ~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 223 STDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eccCCCCceEEEeCCHHHHh
Confidence 8 59999999999873
No 488
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=6.4e-34 Score=314.23 Aligned_cols=206 Identities=26% Similarity=0.368 Sum_probs=164.6
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCcc-----CCCCcc-------cceEEEEcC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1106)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 17 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~q 93 (253)
T TIGR02323 17 KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPD---HGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVHQ 93 (253)
T ss_pred eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEEecccccccccccCCHHHHHHhhhcceEEEEe
Confidence 4899999999999999999999999999999999999998 9999999976 443321 245899999
Q ss_pred CCC--CCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcc-
Q 001293 234 HDN--HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1106)
Q Consensus 234 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1106)
++. ..+.+|+.||+.+....... .... .....++.+++.+|+..
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~--------------------------------~~~~~~~~~l~~l~l~~~ 140 (253)
T TIGR02323 94 NPRDGLRMRVSAGANIGERLMAIGA-RHYG--------------------------------NIRAAAHDWLEEVEIDPT 140 (253)
T ss_pred CcccccCccccHHHHHHHHHHHhcc-cchH--------------------------------HHHHHHHHHHHHcCCChh
Confidence 864 45667999999764311100 0000 01123567788999963
Q ss_pred ccccccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHh
Q 001293 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1106)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1106)
..++. ++.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.... +.+||.++|+..++..
T Consensus 141 ~~~~~-----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~vsH~~~~~~~ 214 (253)
T TIGR02323 141 RIDDL-----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDL-GLAVIIVTHDLGVARL 214 (253)
T ss_pred hhhcC-----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHH
Confidence 44443 45699999999999999999999999999999999999999999999876433 4455557788889999
Q ss_pred hcCeEEEEcCCeEEEEcChHHHH
Q 001293 391 LFDDIILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1106)
.+|++++|++|++++.|+.+++.
T Consensus 215 ~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 215 LAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred hcCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988764
No 489
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=7.3e-33 Score=341.50 Aligned_cols=212 Identities=25% Similarity=0.355 Sum_probs=177.0
Q ss_pred ceeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCcc
Q 001293 854 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 933 (1106)
Q Consensus 854 ~~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 933 (1106)
..++++||+|+|+. .+.++|+|+|+++++|++++|+|+||||||||+++|+|... +.+|+|.+||.+
T Consensus 329 ~~i~~~~v~f~y~~-----------~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~--~~~G~I~i~g~~ 395 (571)
T TIGR02203 329 GDVEFRNVTFRYPG-----------RDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYE--PDSGQILLDGHD 395 (571)
T ss_pred CeEEEEEEEEEcCC-----------CCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccC--CCCCeEEECCEe
Confidence 46999999999852 12368999999999999999999999999999999999876 568999999987
Q ss_pred CCc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccc-------ccCCC
Q 001293 934 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGLP 1003 (1106)
Q Consensus 934 ~~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~-------~~g~~ 1003 (1106)
+.+ ..+++.++||+|++.+++ .|++||+.++. +.+.+ ++.++++++.+++.+..+. .++..
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~ 466 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFN-DTIANNIAYGR----TEQAD----RAEIERALAAAYAQDFVDKLPLGLDTPIGEN 466 (571)
T ss_pred HHhcCHHHHHhhceEEccCccccc-ccHHHHHhcCC----CCCCC----HHHHHHHHHHcChHHHHHhCcCcccceecCC
Confidence 643 456778999999998765 59999998752 11222 3347888999888765433 33333
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEec
Q 001293 1004 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1083 (1106)
Q Consensus 1004 g~~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~ 1083 (1106)
...||||||||++||||++++|+|++||||||+||+.+++.|++.|++.. +++|+|++||+++ ..+.||++++|++
T Consensus 467 -g~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~-~~~tiIiitH~~~--~~~~~D~ii~l~~ 542 (571)
T TIGR02203 467 -GVLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM-QGRTTLVIAHRLS--TIEKADRIVVMDD 542 (571)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh-CCCEEEEEehhhH--HHHhCCEEEEEeC
Confidence 36799999999999999999999999999999999999999999999875 5799999999985 5788999999986
Q ss_pred CCEEEEecC
Q 001293 1084 GGQEIYVGP 1092 (1106)
Q Consensus 1084 Gg~~~~~g~ 1092 (1106)
|+++..|+
T Consensus 543 -g~i~~~g~ 550 (571)
T TIGR02203 543 -GRIVERGT 550 (571)
T ss_pred -CEEEeeCC
Confidence 68887776
No 490
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.2e-34 Score=319.10 Aligned_cols=198 Identities=23% Similarity=0.222 Sum_probs=159.2
Q ss_pred eeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc---ccceEEEEcCCCCCCCCCC
Q 001293 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1106)
.+|+|+|+.|++||+++|+|||||||||||++|+|+++ . +|+|.++|.++.... .++.++||+|++.+++ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 38999999999999999999999999999999999997 5 899999999876543 2467999999988876 59
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCC-------ccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL-------DVCADTM 315 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~dt~ 315 (1106)
|++|+.+... ...+. +...++.+|| +...|+.
T Consensus 93 v~~nl~~~~~-----~~~~~------------------------------------~~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDEE------------------------------------IWKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHHH------------------------------------HHHHHHHcCCHHHHHhCcccccce
Confidence 9999963210 01111 1112223333 3455677
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
+++ ....||||||||++||||++.+|+|++|||||++||+.+...+.+.|++.. . +++|+.++|+...+. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~-~~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--A-DCTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--C-CCEEEEEECCHHHHH-hCCEE
Confidence 766 456799999999999999999999999999999999999999999999752 3 445566777776665 59999
Q ss_pred EEEcCCeEEEEcChHHHHH
Q 001293 396 ILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1106)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999864
No 491
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.2e-34 Score=308.51 Aligned_cols=192 Identities=28% Similarity=0.407 Sum_probs=159.9
Q ss_pred ceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCC-------cccceEEEEcCCCCCCCCCC
Q 001293 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1106)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1106)
|+|+++++ ++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999998 99999999876421 12357999999988888999
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccccccc
Q 001293 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1106)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1106)
|+||+.+..... .. . .....++.+++.+||++..+..+ .
T Consensus 92 ~~~~l~~~~~~~---~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---RN-----R----------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---CH-----H----------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998764211 00 0 00123456788999986655443 4
Q ss_pred CCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEEcCCe
Q 001293 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1106)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1106)
.||||||||++||++++.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|+..++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNL-NIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999886532 4456667888889999999999999999
Q ss_pred EEEEc
Q 001293 403 IVYQG 407 (1106)
Q Consensus 403 iv~~G 407 (1106)
++++|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 492
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.2e-34 Score=357.52 Aligned_cols=259 Identities=24% Similarity=0.391 Sum_probs=190.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCC-cceEEEeeeEEEEEEecCCCcCCchhHHHHHHHHHHHHHhh
Q 001293 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1106)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1106)
.++.+..++|+.+.++.+++. ....+....+.+ ...++|+|+++.++..
T Consensus 301 ~~~~~~~~~ri~~~l~~~~~~-----~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------------------- 350 (576)
T TIGR02204 301 LQRAAGAAERLIELLQAEPDI-----KAPAHPKTLPVPLRGEIEFEQVNFAYPAR------------------------- 350 (576)
T ss_pred HHHHHHHHHHHHHHhCCCCcC-----CCCCCCccCCcCCCceEEEEEEEEECCCC-------------------------
Confidence 456677777777776544320 000000011112 2359999999997420
Q ss_pred hcCCccccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc---cceEEEEcC
Q 001293 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1106)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1106)
..+.+|+|+|++++|||.++|+||||||||||+++|+|+++|+ +|+|.+||.++++..+ ++.++||+|
T Consensus 351 ------~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~~~Q 421 (576)
T TIGR02204 351 ------PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ---SGRILLDGVDLRQLDPAELRARMALVPQ 421 (576)
T ss_pred ------CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHHhceEEcc
Confidence 1135999999999999999999999999999999999999998 9999999999876654 367999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccc
Q 001293 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1106)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1106)
++. +++.|++|||.++.. ....+.+.++.+. .+ ..+.++ .+++..|
T Consensus 422 ~~~-lf~~Ti~~Ni~~~~~----~~~~~~~~~~l~~---~~------------------------l~~~i~--~l~~gl~ 467 (576)
T TIGR02204 422 DPV-LFAASVMENIRYGRP----DATDEEVEAAARA---AH------------------------AHEFIS--ALPEGYD 467 (576)
T ss_pred CCc-cccccHHHHHhcCCC----CCCHHHHHHHHHH---cC------------------------cHHHHH--hCCCCCC
Confidence 764 556799999987531 1111111111111 00 011222 2566778
Q ss_pred cccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcC
Q 001293 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1106)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1106)
|.+|+.+ ..||||||||++||||++.+|++++||||||+||+.++..+++.|+++. .++|+|+ ++|.. +....+|
T Consensus 468 t~i~~~g-~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~--~~~t~Ii-itH~~-~~~~~~d 542 (576)
T TIGR02204 468 TYLGERG-VTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM--KGRTTLI-IAHRL-ATVLKAD 542 (576)
T ss_pred ceeCCCC-CcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCC
Confidence 9998764 4699999999999999999999999999999999999999999999863 3455555 55544 5567899
Q ss_pred eEEEEcCCeEEEEcChHHHHH
Q 001293 394 DIILLSDGQIVYQGPRELVLE 414 (1106)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1106)
+|++|++|+++..|+++++.+
T Consensus 543 ~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 543 RIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred EEEEEECCEEEeeecHHHHHH
Confidence 999999999999999988753
No 493
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.9e-34 Score=314.48 Aligned_cols=198 Identities=25% Similarity=0.370 Sum_probs=167.5
Q ss_pred EeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc---ccccceEEEEccCCCCCCCCCHH
Q 001293 883 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIY 959 (1106)
Q Consensus 883 ~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~~tv~ 959 (1106)
+|+|+||++++|++++|+|+||||||||+++|+|... ..|+|.++|.+... ..+++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999763 38999999987643 23345689999998878889999
Q ss_pred HHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhc-------CCCeEEEe
Q 001293 960 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1032 (1106)
Q Consensus 960 e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~-------~p~illLD 1032 (1106)
||+.+.... ....+...+.++++++.+++.+..+.. +..||+|||||++||+||+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112223345678899999998766654 35799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEEEEecCCC
Q 001293 1033 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1094 (1106)
Q Consensus 1033 EPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~~~~g~~g 1094 (1106)
|||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|+..
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999999999999877999999999987 58889999999986 5888888754
No 494
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-35 Score=317.46 Aligned_cols=209 Identities=24% Similarity=0.322 Sum_probs=162.4
Q ss_pred eeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc
Q 001293 857 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 936 (1106)
Q Consensus 857 ~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 936 (1106)
+++|+++.++. .+..+|+|+||++++|++++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhh
Confidence 46677666531 11258999999999999999999999999999999999876 468999999976532
Q ss_pred ---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHH-----HHHHHHHHc--CCccccccccCCCCCC
Q 001293 937 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKM-----FIDEVMELV--ELNPLRQSLVGLPGVS 1006 (1106)
Q Consensus 937 ---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~-----~v~~~l~~~--~l~~~~~~~~g~~g~~ 1006 (1106)
...++.++|++|++.+++ .|++||+.+.... ........ .+++.++.+ ++....+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567999999988776 6999999875321 11111111 123344444 344333332 46
Q ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCE
Q 001293 1007 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1086 (1106)
Q Consensus 1007 ~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~ 1086 (1106)
.||+|||||++|||||+.+|++|+|||||+|||+.++..+++.|+++. +++|||++||+++ ++. .||++++|++| +
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~~-~~d~v~~l~~G-~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TIE-NADRIVVLEDG-K 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HHh-hCCEEEEecCC-e
Confidence 799999999999999999999999999999999999999999999986 4899999999986 454 59999999875 7
Q ss_pred EEEecCC
Q 001293 1087 EIYVGPL 1093 (1106)
Q Consensus 1087 ~~~~g~~ 1093 (1106)
+++.|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 8888764
No 495
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=2.3e-34 Score=303.69 Aligned_cols=178 Identities=26% Similarity=0.336 Sum_probs=149.9
Q ss_pred eEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccCCc-----ccccceEEEEccCCC-CCC
Q 001293 881 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-----ETFARISGYCEQNDI-HSP 954 (1106)
Q Consensus 881 ~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~~-~~~ 954 (1106)
+.+|+|+||+|++|+++||+|+||||||||+++|+|... +..|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 469999999999999999999999999999999999865 468999999987531 134567999999973 233
Q ss_pred CCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCCCCHHHHHHHHHHHHHhcCCCeEEEeCC
Q 001293 955 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1034 (1106)
Q Consensus 955 ~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~LSgGqrqrl~iA~aL~~~p~illLDEP 1034 (1106)
..|++||+.+..... ..+.+...+.++++++.+++.+..+.. +..||+|||||++|||||+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERP-----THCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998864322 123333445678899999998777665 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCcc
Q 001293 1035 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1068 (1106)
Q Consensus 1035 tsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~ 1068 (1106)
|+|||+.++..+++.|+++.++|+|||++||+++
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 496
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7.1e-34 Score=315.90 Aligned_cols=206 Identities=25% Similarity=0.323 Sum_probs=168.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCcc------cceEEEEcCCC--C
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1106)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 46999999999999999999999999999999999999988 9999999998755332 45799999986 3
Q ss_pred CCCCCCHHHHHHHHHHhc-CCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCc-ccccc
Q 001293 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1106)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1106)
+++..|++|++.+..... .. . . .+....++.+++.+|+. ...++
T Consensus 102 ~~~~~t~~~~l~~~~~~~~~~--~-----~---------------------------~~~~~~~~~~l~~~gl~~~~~~~ 147 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLLSL--D-----K---------------------------AERLARASEMLRAVDLDDSVLDK 147 (268)
T ss_pred cCCCCCHHHHHHHHHHhhccC--C-----H---------------------------HHHHHHHHHHHHHcCCChhHhhC
Confidence 667899999997653210 00 0 0 00112456778899986 34444
Q ss_pred ccccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCe
Q 001293 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1106)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1106)
..+.||||||||++||++|+.+|++|||||||+|||+.+...+.+.|+++.... +++|+.++|+..++.+++|+
T Consensus 148 -----~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiiivsH~~~~i~~~~d~ 221 (268)
T PRK10419 148 -----RPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQF-GTACLFITHDLRLVERFCQR 221 (268)
T ss_pred -----CCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHc-CcEEEEEECCHHHHHHhCCE
Confidence 345699999999999999999999999999999999999999999999876533 45556678888899999999
Q ss_pred EEEEcCCeEEEEcChHHHH
Q 001293 395 IILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1106)
+++|++|++++.|+.+++.
T Consensus 222 i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 222 VMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEEECCEEeeeCChhhcc
Confidence 9999999999999988764
No 497
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.5e-35 Score=331.55 Aligned_cols=213 Identities=24% Similarity=0.351 Sum_probs=180.8
Q ss_pred eeeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCeeeeEEEEcCccC
Q 001293 855 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 934 (1106)
Q Consensus 855 ~l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 934 (1106)
.++++||+|+|+-+ ..++|+|+||++++||++||+|+||||||||++.|+|... +.+|+|.++|.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999999843 3469999999999999999999999999999999999655 5689999999886
Q ss_pred Cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCcccccccc-C-----CCCC
Q 001293 935 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLV-G-----LPGV 1005 (1106)
Q Consensus 935 ~~---~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~-g-----~~g~ 1005 (1106)
.. ..+++.+++++|...++ .-|+|+||.+.. ++.+ ++.++++++.++|.++....+ | .+|+
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~-----~~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge~G 472 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN-----PDAS----DEELWAALQQVGLEKLLESAPDGLNTWLGEGG 472 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC-----CCCC----HHHHHHHHHHcCHHHHHHhChhhhhchhccCC
Confidence 43 34667889999977665 469999998742 2333 455899999999988765542 2 1355
Q ss_pred CCCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCC
Q 001293 1006 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1085 (1106)
Q Consensus 1006 ~~LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg 1085 (1106)
..||||||||++|||+|++|.++++|||||.|||+.+.+.|++.+.+.++ |+|+|++||+.. -.+.||+|++|++ |
T Consensus 473 ~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~-G 548 (573)
T COG4987 473 RRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN-G 548 (573)
T ss_pred CcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-C
Confidence 78999999999999999999999999999999999999999999998864 899999999986 4688999999986 6
Q ss_pred EEEEecCCC
Q 001293 1086 QEIYVGPLG 1094 (1106)
Q Consensus 1086 ~~~~~g~~g 1094 (1106)
++++.|.-+
T Consensus 549 kiie~G~~~ 557 (573)
T COG4987 549 KIIEEGTHA 557 (573)
T ss_pred eeeecCCHH
Confidence 999999854
No 498
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=313.98 Aligned_cols=219 Identities=21% Similarity=0.267 Sum_probs=174.8
Q ss_pred eeeecccccccChhhHHhhccccCceEEeeeeEEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--C-CeeeeEEEEcCc
Q 001293 856 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISGY 932 (1106)
Q Consensus 856 l~f~~v~y~v~~~~~~~~~~~~~~~~~~L~~is~~v~~G~~~al~G~nGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g~ 932 (1106)
+.++||++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|... + .+..|+|.++|.
T Consensus 4 l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 70 (250)
T PRK14266 4 IEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGV 70 (250)
T ss_pred EEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCE
Confidence 67888887763 2469999999999999999999999999999999999643 1 125899999998
Q ss_pred cCCc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHcCCccccccccCCCCCCC
Q 001293 933 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 1007 (1106)
Q Consensus 933 ~~~~-----~~~~~~~gyv~q~~~~~~~~tv~e~l~~~~~~r~~~~~~~~~~~~~v~~~l~~~~l~~~~~~~~g~~g~~~ 1007 (1106)
++.. ...++.++|++|++.+++. |+.||+.+...... ....+...+.+.++++.+++.+........ .+..
T Consensus 71 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~~ 146 (250)
T PRK14266 71 DIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SALG 146 (250)
T ss_pred EcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Cccc
Confidence 7542 2345679999999887774 99999987643221 112233445678889998885321111111 2467
Q ss_pred CCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEecCccHHHHHhcCeEEEEecCCEE
Q 001293 1008 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1087 (1106)
Q Consensus 1008 LSgGqrqrl~iA~aL~~~p~illLDEPtsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H~~~~~~~~~~D~v~~l~~Gg~~ 1087 (1106)
||+|||||++|||+|+.+|+||+|||||+|||+.++..+.+.|+++. +++|||++||++. ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i 223 (250)
T PRK14266 147 LSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLK-EDYTIVIVTHNMQ-QATRVSKYTSFFLN-GEI 223 (250)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEECCHH-HHHhhcCEEEEEEC-CeE
Confidence 99999999999999999999999999999999999999999999985 4899999999987 58889999999986 689
Q ss_pred EEecCCC
Q 001293 1088 IYVGPLG 1094 (1106)
Q Consensus 1088 ~~~g~~g 1094 (1106)
++.|+..
T Consensus 224 ~~~g~~~ 230 (250)
T PRK14266 224 IESGLTD 230 (250)
T ss_pred EEeCCHH
Confidence 8988753
No 499
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.1e-34 Score=330.73 Aligned_cols=210 Identities=29% Similarity=0.385 Sum_probs=177.8
Q ss_pred ccceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccC--CCC---cccceEEEEcCCC--
Q 001293 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDM--DEF---VPQRTAAYISQHD-- 235 (1106)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~--~~~---~~~~~~~yv~Q~d-- 235 (1106)
+...+++||||.+++||+++|+|+||||||||.++|+|+++|+ +|+|.++|.+. +.- ..++.+-+|+|++
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 4567999999999999999999999999999999999999998 99999999872 111 1235677888875
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCccccccc
Q 001293 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1106)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1106)
.+.|.+||+++|.......+... ..+.+.+++++++..||+..
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----
Confidence 68999999999998765443211 11123467889999999842
Q ss_pred cccccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeE
Q 001293 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1106)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1106)
..++++.+|||||||||+|||||+.+|+++++|||||+||++++.++++.|+++.++ -+.+.+.|+|+..-+...||||
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e-~g~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEE-LGLTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHH-hCCEEEEEeCCHHHHHhhCceE
Confidence 445778889999999999999999999999999999999999999999999998764 4566777999999999999999
Q ss_pred EEEcCCeEEEEcChHHHH
Q 001293 396 ILLSDGQIVYQGPRELVL 413 (1106)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1106)
++|.+|+||+.||.+++.
T Consensus 501 ~vm~~G~iVE~G~~~~v~ 518 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVF 518 (539)
T ss_pred EEEECCeEEEeCCHHHHh
Confidence 999999999999998874
No 500
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=5.8e-34 Score=307.78 Aligned_cols=196 Identities=28% Similarity=0.398 Sum_probs=160.8
Q ss_pred ceeeeceeEEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCccCCCCc------ccceEEEEcCCCCCC
Q 001293 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHI 238 (1106)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1106)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 46999999999999999999999999999999999999998 999999999875432 236799999999888
Q ss_pred CCCCHHHHHHHHHHhcCCCchhhhhHHHHHHHHhcCCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHcCCcccccccccc
Q 001293 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1106)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1106)
+.+|+.||+.++......-.. .+....++++++.+||.+..++.+
T Consensus 95 ~~~t~~~n~~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 139 (220)
T TIGR02982 95 GFLTARQNVQMALELQPNLSY---------------------------------QEARERARAMLEAVGLGDHLDYYP-- 139 (220)
T ss_pred CCCCHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCChhhhhcCh--
Confidence 889999999987543210000 001123567889999987666544
Q ss_pred ccccCCChhhhHHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecChhHHHhhcCeEEEE
Q 001293 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1106)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLD~~~~~~i~~~l~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1106)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....+.|+|+ ++|+.. +.+.+|+|++|
T Consensus 140 ---~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~-~sh~~~-~~~~~d~v~~l 214 (220)
T TIGR02982 140 ---HNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILI-VTHDNR-ILDVADRIVHM 214 (220)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHH-HHhhCCEEEEE
Confidence 5699999999999999999999999999999999999999999999876433455555 555554 56899999999
Q ss_pred cCCeE
Q 001293 399 SDGQI 403 (1106)
Q Consensus 399 ~~G~i 403 (1106)
.+|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
Done!