BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001298
(1105 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SXL4|AHK1_ARATH Histidine kinase 1 OS=Arabidopsis thaliana GN=AHK1 PE=1 SV=2
Length = 1207
Score = 1343 bits (3476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/1138 (60%), Positives = 851/1138 (74%), Gaps = 71/1138 (6%)
Query: 1 MLAILIGLLTVLTWHFTRVYTTKSLDTLAYGLRYELLQRPLLRMWNIVNSTAEITAAQVK 60
MLAILIGLLTVLTWHFTR+YT +SL TLAYGLRYELLQRP+LRMW+++N+T+E+T AQVK
Sbjct: 87 MLAILIGLLTVLTWHFTRIYTKQSLQTLAYGLRYELLQRPVLRMWSVLNTTSELTTAQVK 146
Query: 61 LSEYVIKRYNKPATQAEQIQLYEVMRDVTWAMFASRKALNAITINYKNGFVQAFHRDHRS 120
LSEYVIK+Y+KP TQ E +++Y+ M+DVTWA+FAS KALNAITINY+NGFVQAFHRD S
Sbjct: 147 LSEYVIKKYDKPTTQEELVEMYQAMKDVTWALFASAKALNAITINYRNGFVQAFHRDPAS 206
Query: 121 NNTFYIYSDLSNYSIGTSGPYDSNLISSREGWNDQSIKGNISAIWYREPLDPITGEKIGK 180
++TFYI+SDL NYSI +GP D + GWN++SI GN+SAIWY++ LDP+TGE +GK
Sbjct: 207 SSTFYIFSDLKNYSISGTGPEDVS------GWNNKSIHGNMSAIWYQQQLDPVTGENLGK 260
Query: 181 ASPIPPDDLINIAGISQVPDGVASWHVAVSKFTNSPLLSAALPVWDPTTSNKSIVAVVGV 240
IPPDDLINIAGISQVPDG ASWHV VSK+ +SPLLSAALPV+D SNKSIVAVVGV
Sbjct: 261 PLKIPPDDLINIAGISQVPDGEASWHVTVSKYMDSPLLSAALPVFD--ASNKSIVAVVGV 318
Query: 241 TTALSSVGQLMKELVEVHSGHIYLTSQEGYLLATSTNAPLLTNSSTGPNLVKAVDSDNPV 300
TTAL SVGQLM++LVEVH GHIYLTSQEGYLLATST+ PLL N+S GP L+KA DS+ V
Sbjct: 319 TTALYSVGQLMRDLVEVHGGHIYLTSQEGYLLATSTDGPLLKNTSNGPQLMKATDSEEWV 378
Query: 301 IQMGAQWLQSEYGSKVPPGHVIHVQNAKLGHKQYYMDTFFLNLKRLPIVGVIIIPREYIM 360
I+ GAQWL+ YGSK P HV+H +N KLG ++YY+D+F+LNLKRLPIVGV+IIPR++IM
Sbjct: 379 IKSGAQWLEKTYGSKRP--HVVHAENVKLGDQRYYIDSFYLNLKRLPIVGVVIIPRKFIM 436
Query: 361 GKADERAYKTLIILISASVCILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASN 420
GK DERA+KTLIILISASVCI IGC+CILILTNGVSKEMKLRAELI LDARR+AEAS+
Sbjct: 437 GKVDERAFKTLIILISASVCIFFIGCVCILILTNGVSKEMKLRAELIRQLDARRRAEASS 496
Query: 421 NYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRIL 480
NYKSQFLANMSHELRTPMAA+IGLL+IL SDD L+NEQY+TV QI+K S ALLRLLN IL
Sbjct: 497 NYKSQFLANMSHELRTPMAAVIGLLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNIL 556
Query: 481 DLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRV 540
DLSKVESGK+ LE EFDL +ELE LVDMFSVQC NHNVETVLDLSD++P VRGD R+
Sbjct: 557 DLSKVESGKLVLEEAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPALVRGDSARL 616
Query: 541 FQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNA 600
QIF+NLI+NSIKFT++GHII+RGWCEN+++ + DR+K +TK Q N+
Sbjct: 617 VQIFANLISNSIKFTTTGHIILRGWCENINSLHDEMSVSVDRRKPWAPMKTKQVQHRNHL 676
Query: 601 M-NFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLV 659
+ + NK+ L FEVDDTGCGID SKW++VFESFEQ DPSTTR HGGTGLGL IVR LV
Sbjct: 677 QKSCKNANKMVLWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRTHGGTGLGLCIVRNLV 736
Query: 660 NKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDADFPN--TVVVLATVGSMERMIIS 717
NKMGGEIKVV+KN GTLM+LYL+L Q DF VV+L+ GS RMI S
Sbjct: 737 NKMGGEIKVVQKNGLGTLMRLYLILSTPDTVDQNIQPDFSKYGLVVMLSMYGSTARMITS 796
Query: 718 QWLRKKKVSTLETSEWHGLTQILRELLDPISPVSSNGFDAPYSSREPLKAEMTNIKALID 777
+WLRK ++T+E S+W+ LTQI+R+LL+ S N FD+ ++ +PL+AE++NI + +
Sbjct: 797 KWLRKHGIATVEASDWNELTQIIRDLLETGS--RDNSFDSQHNISDPLRAELSNIVEIKN 854
Query: 778 PVYVVVIDIALLDLSSDLWREQLNSLDIFHRKAMFAWVVNHQTTSPIKTELSREGQNIVV 837
PV+V+V+DI +LDL++++W+EQLN LD F KA FAW++ H T++ +KTEL R+G ++V
Sbjct: 855 PVFVIVVDIGVLDLTTNIWKEQLNYLDRFSNKAKFAWLLKHDTSNTVKTELRRKGHVMMV 914
Query: 838 TKPLYKGKMIQLLETAVRGKILGMQNRISSTTNEGNGEEIRGSIANYSASKHQKFRKCSF 897
KPLYK KMIQ+LE ++ + G+ N + N GNG + + +F CS
Sbjct: 915 NKPLYKAKMIQILEAVIKNRKRGLCNDLR---NRGNGSDESHDCLEIDPT---QFDTCSS 968
Query: 898 EFSSICPGE---SSSRREDLIHTMFRERHQI-GSSRRDQPCSSSNSSSN----------- 942
+ SS GE S + +H+ + + I ++ D S+S + N
Sbjct: 969 DDSSETSGEKQVDKSVKPSTLHSPVLKNYLIDATTSNDDSTSASMTQKNPEEEDWKDRLY 1028
Query: 943 --------QKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALN-RML 993
++ LEG+RILLAEDTP++Q VA +LEK+GATV+ V DG QAV++LN + +
Sbjct: 1029 SGIALDGKNQKSLEGIRILLAEDTPVLQRVATIMLEKMGATVTAVWDGQQAVDSLNYKSI 1088
Query: 994 AAE-----------------SSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATI 1036
A+ ++R SL SP +DLILMDCQMPKMDGYEAT
Sbjct: 1089 NAQAPTEEHKSFEEETANKVTTRETSLRNSSP--------YDLILMDCQMPKMDGYEATK 1140
Query: 1037 EIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRLTK 1094
IR++E +IPIVALTAHAM++DE KCL VGM+AYLTKPID + MVSTIL LTK
Sbjct: 1141 AIRRAEI-GTELHIPIVALTAHAMSSDEAKCLEVGMDAYLTKPIDRKLMVSTILSLTK 1197
>sp|O22267|CKI1_ARATH Histidine kinase CKI1 OS=Arabidopsis thaliana GN=CKI1 PE=1 SV=1
Length = 1122
Score = 192 bits (489), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 273/549 (49%), Gaps = 63/549 (11%)
Query: 165 WYREPLDPITGEKIGKASPIPPDDLINIAGISQVPDGVASW-HVAVSKFTNSPLLSAALP 223
WY + +D +TG G ++ D+ + W A S + + +L
Sbjct: 155 WYTQTVDQLTGRLNGNSTKSQSLDVTH-----------TDWFQAAQSNNYTTAFVGTSLG 203
Query: 224 VWDPTTSNKSIVAVVGVTTALSSVGQLMKELVEV------HSGHIYLTSQEGYLL---AT 274
D T +S+V++ L S+G +K L EV H +Y+ +++G +L +
Sbjct: 204 GEDNETLIQSVVSLYS-KKGLVSLGFPVKTLTEVLNSLNLHGEELYMWTKDGTVLVREGS 262
Query: 275 STNAPLLTNSSTGPNLVKAVDSDNPVIQMGAQWLQSEYGSKVPPGHVIHVQNAKLGHKQY 334
++ ++N S + +S+ + W Q + G+ + ++ + Y
Sbjct: 263 LNDSFFISNGS----ICFGRESN-------SLWSQCIPENCSSSGYEVEIKRLR-----Y 306
Query: 335 YMDTFFLNLKRLPIVGVIIIPRE----YIMGKADERAYKTLIILISASVCILVIG--CIC 388
+ + +P+ ++ P + I +A++ Y+ ++++I L G
Sbjct: 307 QAFCSVIEVSGVPLRYTLMFPNKGGATRIKHQAEKAKYQLIVVMI-----FLGFGWPVWF 361
Query: 389 ILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEIL 448
+ + +EM +RA LI+ ++A ++AE + KSQ AN SH++R +A + GL++I
Sbjct: 362 VWFMMQATRREMHMRATLINQMEATQQAERKSMNKSQAFANASHDIRGALAGMKGLIDIC 421
Query: 449 KSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVD 508
+ + ++ +T+ Q+ + L+ LLN +LD+SK+ESGKM+L +F+L K LE+++D
Sbjct: 422 RDGVKPGSDVDTTLNQVNVCAKDLVALLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVID 481
Query: 509 MFSVQCSNHNVETVLDLSDNIP---RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGW 565
+ V+ VLD D NVRGD GR+ QI +NL++N++KFT GHI +R W
Sbjct: 482 FYHPVAMKKGVDVVLDPHDGSVFKFSNVRGDSGRLKQILNNLVSNAVKFTVDGHIAVRAW 541
Query: 566 CENLDTSKNT--AEFPTDRKKFGRAFRTKLKQQANN-----AMNFRED-NKLALCFEVDD 617
+ ++ + A +P KF ++ K K++++ + + R + N + FEVDD
Sbjct: 542 AQRPGSNSSVVLASYPKGVSKFVKSMFCKNKEESSTYETEISNSIRNNANTMEFVFEVDD 601
Query: 618 TGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKK--NSPG 675
TG GI ++VFE++ Q T + H GTGLGL IV++LV MGGEI++ K G
Sbjct: 602 TGKGIPMEMRKSVFENYVQVR-ETAQGHQGTGLGLGIVQSLVRLMGGEIRITDKAMGEKG 660
Query: 676 TLMQLYLLL 684
T Q +LL
Sbjct: 661 TCFQFNVLL 669
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 95/176 (53%), Gaps = 15/176 (8%)
Query: 907 SSSRREDLIHTMFRERHQIGSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVAC 966
+ S E + ++ R IG+ +Q S + L G R+L+ +D + + VA
Sbjct: 947 TDSESETRVKSVRTGRKPIGNPEDEQ----ETSKPSDDEFLRGKRVLVVDDNFISRKVAT 1002
Query: 967 KILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQM 1026
L+K+G VS V EAL R++ ++R QGS + P FD I MDCQM
Sbjct: 1003 GKLKKMG--VSEVEQCDSGKEAL-RLVTEGLTQREE--QGSVDKLP----FDYIFMDCQM 1053
Query: 1027 PKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADE-KKCLGVGMNAYLTKPID 1081
P+MDGYEAT EIRK E +G R PI+A++ H ++E ++ + GM+A+L K ++
Sbjct: 1054 PEMDGYEATREIRKVEKSYGVRT-PIIAVSGHDPGSEEARETIQAGMDAFLDKSLN 1108
>sp|Q9C5U1|AHK3_ARATH Histidine kinase 3 OS=Arabidopsis thaliana GN=AHK3 PE=1 SV=1
Length = 1036
Score = 181 bits (458), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 169/310 (54%), Gaps = 21/310 (6%)
Query: 372 IILISASVCILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMS 431
++ + S ILVI + I+ VS+ K+ + ++KAEA++ KSQFLA +S
Sbjct: 400 VLSMVTSFGILVIALLVAHIIHATVSRIHKVEEDCDKMKQLKKKAEAADVAKSQFLATVS 459
Query: 432 HELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKME 491
HE+RTPM ++G+L +L D +L Q V + S AL+ L+N +LD +K+ESGK+E
Sbjct: 460 HEIRTPMNGVLGMLHMLM-DTELDVTQQDYVRTAQASGKALVSLINEVLDQAKIESGKLE 518
Query: 492 LENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNS 551
LE FDL+ L++++ +FS + VE + +SD +P + GDPGR QI +NL+ NS
Sbjct: 519 LEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPDMLIGDPGRFRQILTNLMGNS 578
Query: 552 IKFTSSGHI-----IIRGWCENLDTSKNTAEFP---------TDRKKFGRAFRTKLKQQA 597
IKFT GHI ++ E++D TA P DR++ F+ +
Sbjct: 579 IKFTEKGHIFVTVHLVDELFESIDG--ETASSPESTLSGLPVADRQRSWENFKAF---SS 633
Query: 598 NNAMNFRED-NKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVR 656
N +F + L V+DTG GI +F F Q PS +R HGGTG+GLSI +
Sbjct: 634 NGHRSFEPSPPDINLIVSVEDTGVGIPVEAQSRIFTPFMQVGPSISRTHGGTGIGLSISK 693
Query: 657 TLVNKMGGEI 666
LV M GEI
Sbjct: 694 CLVGLMKGEI 703
Score = 80.5 bits (197), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 40/192 (20%)
Query: 925 IGSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQ 984
+G R+ P + + +L G +IL+ +D + VA L+K GA V G++
Sbjct: 865 LGIGIREPPQHKGPPALILRNLLLGRKILIVDDNNVNLRVAAGALKKYGADVVCAESGIK 924
Query: 985 AVEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESE 1044
A+ SLL+ P E FD MD QMP+MDG+EAT IR E E
Sbjct: 925 AI---------------SLLK-PPHE------FDACFMDIQMPEMDGFEATRRIRDMEEE 962
Query: 1045 HGAR-----------------NIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVS 1087
R ++P++A+TA + A ++CL GM+ Y++KP ++E++
Sbjct: 963 MNKRIKNGEALIVENGNKTSWHLPVLAMTADVIQATHEECLKCGMDGYVSKPFEAEQLYR 1022
Query: 1088 TILRLTKNMPSE 1099
+ R N PS+
Sbjct: 1023 EVSRFF-NSPSD 1033
>sp|Q54YZ9|DHKJ_DICDI Hybrid signal transduction histidine kinase J OS=Dictyostelium
discoideum GN=dhkJ PE=3 SV=2
Length = 2062
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 156/283 (55%), Gaps = 40/283 (14%)
Query: 398 KEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNE 457
KE L+ L A+ AEA++ KS F+ANMSHE+RTPM IIG+ + L D +LT E
Sbjct: 1327 KETTLKNTL-----AKETAEAASRAKSDFMANMSHEIRTPMNGIIGMTD-LTLDTELTAE 1380
Query: 458 QYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNH 517
Q + ++ S+ +LL ++N ILD SK+E+G++EL+ EF L+ L + + S +
Sbjct: 1381 QREYLSMVQSSAGSLLTIINDILDFSKIEAGRLELDQAEFSLRAHLYDALKTLSWRAHQK 1440
Query: 518 NVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAE 577
+E V D++ ++P ++ GDPGR+ QI +NL+ N+IKFTS G +
Sbjct: 1441 CIELVCDIASDVPDSLIGDPGRLRQIVNNLVGNAIKFTSQGEV----------------- 1483
Query: 578 FPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQG 637
L + +++ E + L F V DTG GI + K +FE+F Q
Sbjct: 1484 --------------DLVVKVEKSLSCGE---VVLKFSVIDTGIGIPKDKLHLIFEAFSQA 1526
Query: 638 DPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQL 680
D S TR++GGTGLGL+I LV M G++ VV K+ G+ +
Sbjct: 1527 DGSITRRYGGTGLGLTISTRLVELMKGKLSVVSKSGKGSTFEF 1569
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 80/138 (57%), Gaps = 24/138 (17%)
Query: 952 ILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSET 1011
ILLAED + Q +A ++LEK G V + +GLQAV SS+ R
Sbjct: 1731 ILLAEDNAVNQRLAIRLLEKFGHRVQLAENGLQAVA---------SSQLR---------- 1771
Query: 1012 PDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVG 1071
+FDLILMD QMP G+EAT +IRK E E G PI+A+TAHA+ D KCL G
Sbjct: 1772 ----KFDLILMDVQMPHCGGFEATAQIRKREHEQGIHT-PIIAMTAHALARDRVKCLEAG 1826
Query: 1072 MNAYLTKPIDSERMVSTI 1089
M+ Y++KPI+ +++ + I
Sbjct: 1827 MDDYISKPINPDQLKAMI 1844
>sp|Q54U87|DHKA_DICDI Hybrid signal transduction histidine kinase A OS=Dictyostelium
discoideum GN=dhkA PE=1 SV=1
Length = 2150
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 173/308 (56%), Gaps = 44/308 (14%)
Query: 395 GVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQL 454
G ++M R ++ + + AE +N KS F+A +SHE+RTP++ +IG+ ++L + L
Sbjct: 1359 GTLRDMTSRKDMQRLILEKEAAEEANKAKSAFVATVSHEVRTPLSGVIGVSDLLL-ETNL 1417
Query: 455 TNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQC 514
+ EQ V I+KSS ALL ++N ILD SK+ES ++++E F + + + ++ M SV
Sbjct: 1418 SEEQRDYVQTIQKSSQALLTIINDILDYSKLESRQLKMETLPFSIIETCQAVIHMLSV-A 1476
Query: 515 SNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKN 574
+N +V+ +L + N+PR + GD R+ Q+ NL++N+IKFTS GH++ D S +
Sbjct: 1477 ANDDVDILLRVPPNVPRIIFGDAMRMRQVLLNLLSNAIKFTSRGHVLT-------DISVD 1529
Query: 575 TAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESF 634
+ PT+ E+ + LC ++DTG GI QS ++++FE F
Sbjct: 1530 DSIPPTN----------------------TEEEIIHLCITIEDTGIGIPQSLFDSIFEPF 1567
Query: 635 EQGDPSTTRKHGGTGLGLSIVRTLVNK-MGGEIKVVKKNSPGTLMQLYLLLGASSESKQI 693
Q D STTRK+GGTGLGLSI + L+ + MGG I+V ++G S+ K I
Sbjct: 1568 SQADNSTTRKYGGTGLGLSITKRLIEEVMGGTIQVSS------------IVGQGSKFKCI 1615
Query: 694 YDADFPNT 701
PNT
Sbjct: 1616 IPFLLPNT 1623
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 22/130 (16%)
Query: 951 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1010
+ L+ ED L + V ++ +K+ T+S +G +A++ E + R
Sbjct: 2026 KALIVEDNELNRKVLAQLFKKIDWTISFAENGREALK--------EITGERC-------- 2069
Query: 1011 TPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGV 1070
FD++ MDCQMP +DG++ T IR E E+ + + IVAL+A + ++ + CL
Sbjct: 2070 ------FDIVFMDCQMPVLDGFQTTKIIRSKERENNWKRMNIVALSAGSSSSFVQDCLDS 2123
Query: 1071 GMNAYLTKPI 1080
GM++++ KPI
Sbjct: 2124 GMDSFMGKPI 2133
>sp|Q9C5U0|AHK4_ARATH Histidine kinase 4 OS=Arabidopsis thaliana GN=AHK4 PE=1 SV=1
Length = 1080
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 184/364 (50%), Gaps = 32/364 (8%)
Query: 381 ILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAA 440
IG + IL +K+ + + + +AEA++ KSQFLA +SHE+RTPM
Sbjct: 431 FFAIGFLVGYILYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNG 490
Query: 441 IIGLLEILKSDDQLTNEQ--YSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFD 498
I+G+L +L D +L++ Q Y+ Q+ AL+ L+N +LD +K+E+GK+ELE+ FD
Sbjct: 491 ILGMLAMLL-DTELSSTQRDYAQTAQV--CGKALIALINEVLDRAKIEAGKLELESVPFD 547
Query: 499 LQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSG 558
++ L++++ +FS + N ++E + +SD +P V+GD GR QI NL+ NS+KFT G
Sbjct: 548 IRSILDDVLSLFSEESRNKSIELAVFVSDKVPEIVKGDSGRFRQIIINLVGNSVKFTEKG 607
Query: 559 HIIIR-------------------GWCENLDTSKNTAEFPT-------DRKKFGRAFRTK 592
HI ++ G E + + + T D + +F+
Sbjct: 608 HIFVKVHLAEQSKDESEPKNALNGGVSEEMIVVSKQSSYNTLSGYEAADGRNSWDSFK-H 666
Query: 593 LKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGL 652
L + + F + + L ++DTG GI VF F Q D ST+R +GGTG+GL
Sbjct: 667 LVSEEQSLSEFDISSNVRLMVSIEDTGIGIPLVAQGRVFMPFMQADSSTSRNYGGTGIGL 726
Query: 653 SIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDADFPNTVVVLATVGSME 712
SI + LV M G+I + + G+ +L + I PN + +T M+
Sbjct: 727 SISKCLVELMRGQINFISRPHIGSTFWFTAVLEKCDKCSAINHMKKPNVEHLPSTFKGMK 786
Query: 713 RMII 716
+++
Sbjct: 787 AIVV 790
Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 29/192 (15%)
Query: 911 REDLIHTMFRERHQIGSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILE 970
R +I ++ ++ +R+ P SS ++ K +L G +IL+ +D + + VA L+
Sbjct: 908 RASMIGACLQQVLELRKTRQQHPEGSSPAT--LKSLLTGKKILVVDDNIVNRRVAAGALK 965
Query: 971 KVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMD 1030
K GA V G A+ LLQ P T FD MD QMP+MD
Sbjct: 966 KFGAEVVCAESGQVAL---------------GLLQ-----IPHT--FDACFMDIQMPQMD 1003
Query: 1031 GYEATIEIRKSESEHGAR-----NIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERM 1085
G+EAT +IR E E + ++PI+A+TA ++A ++CL GM+ Y++KP + E +
Sbjct: 1004 GFEATRQIRMMEKETKEKTNLEWHLPILAMTADVIHATYEECLKSGMDGYVSKPFEEENL 1063
Query: 1086 VSTILRLTKNMP 1097
++ + K P
Sbjct: 1064 YKSVAKSFKPNP 1075
>sp|O14002|MAK2_SCHPO Peroxide stress-activated histidine kinase mak2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak2 PE=3 SV=1
Length = 2310
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 149/259 (57%), Gaps = 33/259 (12%)
Query: 411 DARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSY 470
+AR A + N K+ FLANMSHELRTP ++ G+L +L SD +L EQY V K+S
Sbjct: 1742 EAREAAMHAVNLKTNFLANMSHELRTPFSSFYGMLSLL-SDTKLNEEQYDIVSTAKQSCT 1800
Query: 471 ALLRLLNRILDLSKVESGKMELE-NTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNI 529
+L+++++ +L+ S+++SGKM+LE + FD+++ + + +++ S+ V+ D+ N+
Sbjct: 1801 SLVQIIDDLLNFSELKSGKMKLEPDKVFDVEENIADCIELVYPSLSSKPVQISYDIYPNV 1860
Query: 530 PRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAF 589
P + GD ++ Q+ +NL+ NS+KFT+ GHI++R C +D N
Sbjct: 1861 PALLAGDSAKLRQVITNLLGNSVKFTTEGHILLR--CMAIDEEINA-------------- 1904
Query: 590 RTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTG 649
E+N+ L FE++DTG G+ + + + +F F Q D STTR +GG+G
Sbjct: 1905 ---------------EENQCKLRFEIEDTGIGLKEEQLKLLFNPFTQVDGSTTRIYGGSG 1949
Query: 650 LGLSIVRTLVNKMGGEIKV 668
LGLSI + M G+I V
Sbjct: 1950 LGLSICLQICKIMDGDIGV 1968
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 940 SSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSR 999
SS +K IL+ L+AED + + + K L +G V DG++ V+
Sbjct: 2169 SSEEKEILQKKYALIAEDNLIARKLLTKQLSNLGFQVHAAVDGVELVKMY---------- 2218
Query: 1000 RRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARN-IPIVALTAH 1058
E + +I D MP DG EA ++IR E E+ IP++ALTA
Sbjct: 2219 ----------EAKQFGFYSVIFADYHMPIRDGAEAVMDIRAYERENNCSTPIPVIALTAD 2268
Query: 1059 AMNADEKKCLGVGMNAYLTKPIDSERMVSTI 1089
+ +++CL VGMN YLTKP +++V+ +
Sbjct: 2269 IQKSAKQRCLEVGMNFYLTKPFTQKQLVNAV 2299
>sp|P0AEC5|BARA_ECOLI Signal transduction histidine-protein kinase BarA OS=Escherichia
coli (strain K12) GN=barA PE=1 SV=1
Length = 918
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 148/266 (55%), Gaps = 38/266 (14%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEI-LKSDDQLTNEQYSTVCQIKKSSY 470
A+++A+ + KS+FLANMSHELRTP+ +IG + LK+ +LT Q + I++S+
Sbjct: 282 AKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKT--ELTPTQRDHLNTIERSAN 339
Query: 471 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIP 530
LL ++N +LD SK+E+GK+ LE+ F L+ L+E+V + + + +E L++ ++P
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399
Query: 531 RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFR 590
NV GDP R+ QI +NL+ N+IKFT +G+I I L +K E
Sbjct: 400 DNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIE------------- 446
Query: 591 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 650
++ DTG GI + +F++F Q D S +R+HGGTGL
Sbjct: 447 ----------------------VQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484
Query: 651 GLSIVRTLVNKMGGEIKVVKKNSPGT 676
GL I + LVN+MGG+I + + G+
Sbjct: 485 GLVITQKLVNEMGGDISFHSQPNRGS 510
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 949 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1008
+ ++ +D P + +LE + V + G QAVE +M
Sbjct: 667 AMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQM---------------- 710
Query: 1009 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1068
FDLILMD QMP MDG A I + + + P++A+TAHAM ++K L
Sbjct: 711 -------PFDLILMDIQMPDMDGIRACELIHQLPHQ---QQTPVIAVTAHAMAGQKEKLL 760
Query: 1069 GVGMNAYLTKPIDSERMVSTILR 1091
G GM+ YL KPI+ ER+ + +LR
Sbjct: 761 GAGMSDYLAKPIEEERLHNLLLR 783
>sp|P0AEC6|BARA_ECOL6 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=barA
PE=1 SV=1
Length = 918
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 148/266 (55%), Gaps = 38/266 (14%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEI-LKSDDQLTNEQYSTVCQIKKSSY 470
A+++A+ + KS+FLANMSHELRTP+ +IG + LK+ +LT Q + I++S+
Sbjct: 282 AKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKT--ELTPTQRDHLNTIERSAN 339
Query: 471 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIP 530
LL ++N +LD SK+E+GK+ LE+ F L+ L+E+V + + + +E L++ ++P
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399
Query: 531 RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFR 590
NV GDP R+ QI +NL+ N+IKFT +G+I I L +K E
Sbjct: 400 DNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIE------------- 446
Query: 591 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 650
++ DTG GI + +F++F Q D S +R+HGGTGL
Sbjct: 447 ----------------------VQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484
Query: 651 GLSIVRTLVNKMGGEIKVVKKNSPGT 676
GL I + LVN+MGG+I + + G+
Sbjct: 485 GLVITQKLVNEMGGDISFHSQPNRGS 510
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 949 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1008
+ ++ +D P + +LE + V + G QAVE +M
Sbjct: 667 AMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQM---------------- 710
Query: 1009 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1068
FDLILMD QMP MDG A I + + + P++A+TAHAM ++K L
Sbjct: 711 -------PFDLILMDIQMPDMDGIRACELIHQLPHQ---QQTPVIAVTAHAMAGQKEKLL 760
Query: 1069 GVGMNAYLTKPIDSERMVSTILR 1091
G GM+ YL KPI+ ER+ + +LR
Sbjct: 761 GAGMSDYLAKPIEEERLHNLLLR 783
>sp|P0AEC7|BARA_ECO57 Signal transduction histidine-protein kinase BarA OS=Escherichia
coli O157:H7 GN=barA PE=3 SV=1
Length = 918
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 148/266 (55%), Gaps = 38/266 (14%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEI-LKSDDQLTNEQYSTVCQIKKSSY 470
A+++A+ + KS+FLANMSHELRTP+ +IG + LK+ +LT Q + I++S+
Sbjct: 282 AKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKT--ELTPTQRDHLNTIERSAN 339
Query: 471 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIP 530
LL ++N +LD SK+E+GK+ LE+ F L+ L+E+V + + + +E L++ ++P
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399
Query: 531 RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFR 590
NV GDP R+ QI +NL+ N+IKFT +G+I I L +K E
Sbjct: 400 DNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIE------------- 446
Query: 591 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 650
++ DTG GI + +F++F Q D S +R+HGGTGL
Sbjct: 447 ----------------------VQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484
Query: 651 GLSIVRTLVNKMGGEIKVVKKNSPGT 676
GL I + LVN+MGG+I + + G+
Sbjct: 485 GLVITQKLVNEMGGDISFHSQPNRGS 510
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 949 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1008
+ ++ +D P + +LE + V + G QAVE +M
Sbjct: 667 AMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQM---------------- 710
Query: 1009 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1068
FDLILMD QMP MDG A I + + + P++A+TAHAM ++K L
Sbjct: 711 -------PFDLILMDIQMPDMDGIRACELIHQLPHQ---QQTPVIAVTAHAMAGQKEKLL 760
Query: 1069 GVGMNAYLTKPIDSERMVSTILR 1091
G GM+ YL KPI+ ER+ + +LR
Sbjct: 761 GAGMSDYLAKPIEEERLHNLLLR 783
>sp|P59342|BARA_SHIFL Signal transduction histidine-protein kinase BarA OS=Shigella
flexneri GN=barA PE=3 SV=1
Length = 918
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/266 (35%), Positives = 148/266 (55%), Gaps = 38/266 (14%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEI-LKSDDQLTNEQYSTVCQIKKSSY 470
A+++A+ + KS+FLANMSHELRTP+ +IG + LK+ +LT Q + I++S+
Sbjct: 282 AKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKT--ELTPTQRDHLNTIERSAN 339
Query: 471 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIP 530
LL ++N +LD SK+E+GK+ LE+ F L+ L+E+V + + + +E L++ ++P
Sbjct: 340 NLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTLNIKSDVP 399
Query: 531 RNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFR 590
NV GDP R+ QI +NL+ N+IKFT +G+I I L +K E
Sbjct: 400 DNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIE------------- 446
Query: 591 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 650
++ DTG GI + +F++F Q D S +R+HGGTGL
Sbjct: 447 ----------------------VQIRDTGIGIPERDQSRLFQAFRQADASISRRHGGTGL 484
Query: 651 GLSIVRTLVNKMGGEIKVVKKNSPGT 676
GL I + LVN+MGG+I + + G+
Sbjct: 485 GLVITQKLVNEMGGDISFHSQPNRGS 510
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 26/143 (18%)
Query: 949 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1008
+ ++ +D P + +LE + V + G QAVE +M
Sbjct: 667 AMTVMAVDDNPANLKLIGALLEDMVQHVELCDSGHQAVERAKQM---------------- 710
Query: 1009 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1068
FDLILMD QMP MDG A I + + R P++A+TAHAM ++K L
Sbjct: 711 -------PFDLILMDIQMPDMDGIRACELIHQLPHQ---RQTPVIAVTAHAMAGQKEKLL 760
Query: 1069 GVGMNAYLTKPIDSERMVSTILR 1091
G GM+ YL KPI+ ER+ + +LR
Sbjct: 761 GAGMSDYLAKPIEEERLHNLLLR 783
>sp|P48027|GACS_PSESY Sensor protein GacS OS=Pseudomonas syringae pv. syringae GN=gacS
PE=3 SV=1
Length = 907
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 149/281 (53%), Gaps = 36/281 (12%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
AR++A ++ KS+FLANMSHE+RTP+ I+G +L+ +LT Q+ + I+KS+
Sbjct: 264 ARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKS-ELTPRQFDYLGTIEKSADN 322
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
LL ++N ILD SK+E+GK+ L+N F+L+ L++ + + + +E V + + P
Sbjct: 323 LLSIINEILDFSKIEAGKLVLDNIPFNLRDLLQDTLTILAPAAHAKQLELVSLVYRDTPL 382
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
+ GDP R+ QI +NL++N+IKFT G I+ R E D ++ A+
Sbjct: 383 ALSGDPLRLRQILTNLVSNAIKFTREGTIVARAMLE--DETEEHAQ-------------- 426
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
L V DTG G+ +F++F Q D S +R+ GGTGLG
Sbjct: 427 -------------------LRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLG 467
Query: 652 LSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQ 692
L I + L+ +MGGEI V G+ + L L + E K+
Sbjct: 468 LVISKRLIEQMGGEIGVDSTPGEGSEFWISLKLPKAREDKE 508
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 23/143 (16%)
Query: 951 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1010
R+L +D P ++ +LE +GA V V G AV A+ +
Sbjct: 658 RVLCVDDNPANLLLVQTLLEDMGAEVVAVEGGYAAVNAVQQ------------------- 698
Query: 1011 TPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGV 1070
FDL+LMD QMP MDG +AT IR E+E ++PIVALTAHAM +++ L
Sbjct: 699 ----EAFDLVLMDVQMPGMDGRQATEAIRAWEAERNQSSLPIVALTAHAMANEKRSLLQS 754
Query: 1071 GMNAYLTKPIDSERMVSTILRLT 1093
GM+ YLTKPI ++ +L+ T
Sbjct: 755 GMDDYLTKPISERQLAQVVLKWT 777
>sp|Q9C5U2|AHK2_ARATH Histidine kinase 2 OS=Arabidopsis thaliana GN=AHK2 PE=1 SV=1
Length = 1176
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 173/343 (50%), Gaps = 32/343 (9%)
Query: 375 ISASVCILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHEL 434
I+ S+ +LVI + IL +++ + + + + +AEA++ KSQFLA +SHE+
Sbjct: 540 ITPSILVLVITFLVGYILYEAINRIATVEEDCQKMRELKARAEAADIAKSQFLATVSHEI 599
Query: 435 RTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELEN 494
RTPM ++G+L++L D L +Q S L L+N +LD +K+ESG++ELEN
Sbjct: 600 RTPMNGVLGMLKMLMDTD-LDAKQMDYAQTAHGSGKDLTSLINEVLDQAKIESGRLELEN 658
Query: 495 TEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKF 554
FD++ L+ + + S + + +E + +S +P V GDP R QI +NL+ NSIKF
Sbjct: 659 VPFDMRFILDNVSSLLSGKANEKGIELAVYVSSQVPDVVVGDPSRFRQIITNLVGNSIKF 718
Query: 555 TSS-GHIII---------------------RGWCENLDTSKNTAEFPTDRKKFG--RAFR 590
T GHI I R ++ + + FP +G + F+
Sbjct: 719 TQERGHIFISVHLADEVKEPLTIEDAVLKQRLALGCSESGETVSGFPA-VNAWGSWKNFK 777
Query: 591 TKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGL 650
T ++ N+ +++ L V+DTG GI +F F Q D ST+R +GGTG+
Sbjct: 778 TCYSTESQNS------DQIKLLVTVEDTGVGIPVDAQGRIFTPFMQADSSTSRTYGGTGI 831
Query: 651 GLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQI 693
GLSI + LV M GE+ V + G+ + G + + I
Sbjct: 832 GLSISKRLVELMQGEMGFVSEPGIGSTFSFTGVFGKAETNTSI 874
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 39/168 (23%)
Query: 942 NQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRR 1001
N +L +IL+ +D + + VA L+K GA V+ V G A+ L
Sbjct: 1027 NLGHLLREKQILVVDDNLVNRRVAEGALKKYGAIVTCVESGKAALAMLK----------- 1075
Query: 1002 SLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGAR------------- 1048
P FD MD QMP+MDG+EAT +R+ E E +
Sbjct: 1076 ------PPHN-----FDACFMDLQMPEMDGFEATRRVRELEREINKKIASGEVSAEMFCK 1124
Query: 1049 ----NIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRL 1092
++PI+A+TA + A ++C+ GM+ Y++KP + E + + + R
Sbjct: 1125 FSSWHVPILAMTADVIQATHEECMKCGMDGYVSKPFEEEVLYTAVARF 1172
>sp|Q86CZ2|DHKK_DICDI Hybrid signal transduction histidine kinase K OS=Dictyostelium
discoideum GN=dhkK PE=1 SV=1
Length = 1213
Score = 155 bits (393), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 165/321 (51%), Gaps = 35/321 (10%)
Query: 356 REYIMGKADERAYKTLIILISASVCIL-VIGCICILILTNGVSKEMKLR-AELISHLDAR 413
EY+ G + +I ++ I+ +I +C + +E KL+ A+L DA
Sbjct: 750 HEYVQGIPSIIIRSHMNFIIDVTIIIMTLIFTLCYQYFIDEAHRETKLKNAQLTIAKDAA 809
Query: 414 RKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALL 473
+A + + +FLA MSHE+RTP+ +IG+ +L+ L E+ + +K LL
Sbjct: 810 IEAYQA---RQEFLATMSHEIRTPLNGLIGMATLLRDSHNLPPEEKTMAKAVKSCGDILL 866
Query: 474 RLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNV 533
RL+N ILDLSK+E+ +M LE+ F +++ +++ + S Q + N+ ++SD IP +
Sbjct: 867 RLVNDILDLSKLEANQMGLEHIPFRMRELTQQICHVLSGQANEKNIHLSCEVSDKIPSIL 926
Query: 534 RGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKL 593
GD GR+ QI NL N++KFT SG++ I +D + +E + +K
Sbjct: 927 LGDSGRILQILMNLTGNALKFTQSGYVKII-----IDLIEEESELVSLKK---------- 971
Query: 594 KQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLS 653
+ + F V DTG G+ + +FE+F Q DPS +RK+GG+GLGL
Sbjct: 972 -------------GEYNISFRVKDTGIGVPVESHQKIFEAFVQADPSDSRKYGGSGLGLY 1018
Query: 654 IVRTLVNKMGGEIKVVKKNSP 674
+ LV M GEI V N+P
Sbjct: 1019 LCAKLVRLMKGEIGVY--NNP 1037
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 28/164 (17%)
Query: 931 DQPCSSSNSSSNQKRILEG-LRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEAL 989
DQ N+ + K + +++L+AED + Q VA K LEK+G V +G + +E L
Sbjct: 1055 DQSMQQMNNGARHKAFPQDCVKVLIAEDNIINQRVAVKFLEKIGIKAEVAGNGNEVLEIL 1114
Query: 990 NRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHG--- 1046
R +DLI MD QMP +DG + IR+ E H
Sbjct: 1115 ERQ-----------------------HYDLIFMDFQMPILDGLRCSKTIREFEQNHKWNR 1151
Query: 1047 -ARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTI 1089
+I I LTA+ M+ D+K+C GMN +++KP E++ S I
Sbjct: 1152 ICPSIFICGLTANTMSTDKKRCFDHGMNHFISKPFQLEQLRSAI 1195
>sp|Q551X9|DHKF_DICDI Hybrid signal transduction histidine kinase F OS=Dictyostelium
discoideum GN=dhkF PE=3 SV=1
Length = 1109
Score = 154 bits (389), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/287 (33%), Positives = 144/287 (50%), Gaps = 45/287 (15%)
Query: 398 KEMKLRAELISHLDARRKAE---------ASNNYKSQFLANMSHELRTPMAAIIGLLEIL 448
KEM + + S L+ +R E + KSQFLA +SHE+RTP+ II + E+L
Sbjct: 284 KEMNIELQKKSELEQKRNQELMEARDLALTATKIKSQFLATISHEIRTPLNGIITMGEML 343
Query: 449 KSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVD 508
S L EQ+ I SS LL + + ILD SK+E+ K+ELE EFD LE +
Sbjct: 344 LSTSPLNTEQHDIAETIFGSSELLLSITSDILDFSKIEASKLELEMIEFDFIGCLEGIGK 403
Query: 509 MFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCEN 568
V +N +E + +IP + GDP R+ QI N+ N++K+T GHI+ R
Sbjct: 404 TIGVSITNKPIEIAFLMDTDIPHRLIGDPNRLIQIMLNMGTNAVKYTDRGHIVFRI---- 459
Query: 569 LDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWE 628
++ RE N+ + +DD+G GI + +
Sbjct: 460 -------------------------------SVISREQNRCKIKISIDDSGIGIGEDQRA 488
Query: 629 TVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPG 675
+FE F Q D S+TRK+GG+GLGL+I L MGGE+ +++++ PG
Sbjct: 489 HLFEPFHQIDSSSTRKYGGSGLGLAISSKLAKLMGGEV-ILERSKPG 534
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 951 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1010
RILL +D + + V L+K+G +G + E +
Sbjct: 928 RILLVDDNAVNRKVVKLQLKKLGYDCDTATNGFEGFEMQKK------------------- 968
Query: 1011 TPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARN-IPIVALTAHAMNADEKKCLG 1069
++LI MD MP DG A+ IR E + ++ IV L+A ++ + C+
Sbjct: 969 ----DNYELIFMDLNMPLCDGSMASKLIRSHEELNNYKSRANIVGLSATYLHGSKDYCVS 1024
Query: 1070 VGMNAYLTKPI 1080
+GM+ ++ KP+
Sbjct: 1025 MGMDDFVVKPL 1035
>sp|P0C0F7|RPFC_XANC8 Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=rpfC PE=3 SV=2
Length = 726
Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 141/263 (53%), Gaps = 36/263 (13%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
A R+A +N KS+FLANMSHE RTP+ + G+ E+L + +L EQ + I+ S+ +
Sbjct: 178 AVREARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATT-RLDAEQKECLNTIQASARS 236
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
LL L+ +LD+S +E+GK+ ++ +F L++ + + + Q +E ++D++P
Sbjct: 237 LLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADDVPD 296
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
++GD + Q+ NL+ N++KFT GH+++R T
Sbjct: 297 LLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLR--------------------------VT 330
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
++ A +A+ R F+V+DTG G+ +FE+FEQ D +R++ GTGLG
Sbjct: 331 RVSGSAEDAVRLR--------FDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLG 382
Query: 652 LSIVRTLVNKMGGEIKVVKKNSP 674
+I + LV MGG I K+N P
Sbjct: 383 TTIAKGLVEAMGGSIG-FKENQP 404
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 937 SNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAE 996
SN + + +R+L+A+D ++V ++LEK G V V Q ++A+ AE
Sbjct: 449 SNPFLRHRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAM-----AE 503
Query: 997 SSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALT 1056
+D +++D MP M+G + ++R ++ G R P+V L+
Sbjct: 504 ED------------------YDAVIVDLHMPGMNGLDMLKQLRVMQAS-GMRYTPVVVLS 544
Query: 1057 AHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRL---TKNMPSEAT 1101
A + C G A+L KP+ + +++ T+ L T+ + + AT
Sbjct: 545 ADVTPEAIRACEQAGARAFLAKPVLAAKLLDTLADLAVSTRQLATPAT 592
>sp|P0C0F6|RPFC_XANCP Sensory/regulatory protein RpfC OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rpfC PE=1 SV=2
Length = 726
Score = 150 bits (378), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 141/263 (53%), Gaps = 36/263 (13%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
A R+A +N KS+FLANMSHE RTP+ + G+ E+L + +L EQ + I+ S+ +
Sbjct: 178 AVREARHANQAKSRFLANMSHEFRTPLNGLSGMTEVLATT-RLDAEQKECLNTIQASARS 236
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
LL L+ +LD+S +E+GK+ ++ +F L++ + + + Q +E ++D++P
Sbjct: 237 LLSLVEEVLDISAIEAGKIRIDRRDFSLREMIGSVNLILQPQARGRRLEYGTQVADDVPD 296
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
++GD + Q+ NL+ N++KFT GH+++R T
Sbjct: 297 LLKGDTAHLRQVLLNLVGNAVKFTEHGHVLLR--------------------------VT 330
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
++ A +A+ R F+V+DTG G+ +FE+FEQ D +R++ GTGLG
Sbjct: 331 RVSGSAEDAVRLR--------FDVEDTGIGVPMDMRPRLFEAFEQADVGLSRRYEGTGLG 382
Query: 652 LSIVRTLVNKMGGEIKVVKKNSP 674
+I + LV MGG I K+N P
Sbjct: 383 TTIAKGLVEAMGGSIG-FKENQP 404
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 27/168 (16%)
Query: 937 SNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAE 996
SN + + +R+L+A+D ++V ++LEK G V V Q ++A+ AE
Sbjct: 449 SNPFLRHRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAM-----AE 503
Query: 997 SSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALT 1056
+D +++D MP M+G + ++R ++ G R P+V L+
Sbjct: 504 ED------------------YDAVIVDLHMPGMNGLDMLKQLRVMQAS-GMRYTPVVVLS 544
Query: 1057 AHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRL---TKNMPSEAT 1101
A + C G A+L KP+ + +++ T+ L T+ + + AT
Sbjct: 545 ADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLADLAVSTRQLATPAT 592
>sp|Q87GU5|LUXQ_VIBPA Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=luxQ PE=3 SV=1
Length = 858
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/288 (32%), Positives = 148/288 (51%), Gaps = 40/288 (13%)
Query: 391 ILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKS 450
I+ G + AE S+L ARR+AE S ++ FLA MSHE+RTP+ I+G+ ++LK
Sbjct: 451 IIVQGQDITTLIEAEKQSNL-ARREAEKSAQARADFLAKMSHEIRTPINGILGVAQLLK- 508
Query: 451 DDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMF 510
D EQ + + ++ S LL +LN ILD SK+E GK ++ F + L +++
Sbjct: 509 DSVEAEEQKNQIDVLRHSGEHLLAVLNDILDFSKIEQGKFNIQKHPFSFADTMRTLENIY 568
Query: 511 SVQCSNHNVETVLD--LSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCEN 568
C N VE V++ L N+ + D R+ QI NL++N++KFT SG + + E
Sbjct: 569 RPICENKGVELVIENQLDGNV--EIFTDQVRLNQILFNLVSNAVKFTPSGCVRLHAELEQ 626
Query: 569 LDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWE 628
+ N+ L E+ DTG GI+ K +
Sbjct: 627 FYGADNS----------------------------------VLVVEISDTGIGIESDKLD 652
Query: 629 TVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGT 676
+FE F Q + +TTR++GG+GLGL+IV+ LV+ + G+++V + GT
Sbjct: 653 EMFEPFVQEEATTTREYGGSGLGLTIVKNLVDMLDGDVQVRSQKGQGT 700
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 54/148 (36%), Gaps = 27/148 (18%)
Query: 933 PCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRM 992
P SS + E L++LL ED + K V DGL+A+E L
Sbjct: 717 PLDSSQRVKPAELFDESLKVLLVEDNHTNAFILKAFCTKYKMQVDWAKDGLEAMEFLK-- 774
Query: 993 LAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPI 1052
+DLILMD Q+P + G E T EIR++ PI
Sbjct: 775 ---------------------DHSYDLILMDNQLPHLGGIETTKEIRQNLK----LGTPI 809
Query: 1053 VALTAHAMNADEKKCLGVGMNAYLTKPI 1080
A TA + G N L KPI
Sbjct: 810 YACTADTAQETSDAFMEAGANYVLLKPI 837
>sp|Q869S5|DOKA_DICDI Hybrid signal transduction protein dokA OS=Dictyostelium discoideum
GN=dokA PE=1 SV=1
Length = 1671
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 145/273 (53%), Gaps = 38/273 (13%)
Query: 405 ELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQ 464
+L + A A + K+QF+ N+SHELRTP I+G+ ++L D QLTN Q +
Sbjct: 1026 DLSRYRQAEMAAIEATRLKTQFITNISHELRTPCHGIVGMSQLLL-DSQLTNTQRDNIDS 1084
Query: 465 IKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLD 524
IK+S+ +L+ L+N ILD SK+E GK+ LEN F+L +EE++D + + ++ +
Sbjct: 1085 IKRSTDSLISLINDILDFSKLEYGKVTLENESFELLPMIEEVLDSQATAANRKGIDLIFV 1144
Query: 525 LSDN--IPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDR 582
+ + +P + GD + ++ NL+ N++KFT +G +++ E TD
Sbjct: 1145 MGRDYPVPPVIFGDRNSLKKVLLNLVGNAVKFTETGFVLL--------------EISTD- 1189
Query: 583 KKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTT 642
+ ++++L F V D+G GI ++K E +F F Q D S +
Sbjct: 1190 --------------------YESGDQISLRFTVKDSGIGIPENKIEQIFVPFGQIDGSFS 1229
Query: 643 RKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPG 675
RK+GG+GLGLS + LV MGG I+V + G
Sbjct: 1230 RKYGGSGLGLSFCKELVALMGGYIRVESGDQEG 1262
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 28/138 (20%)
Query: 952 ILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSET 1011
IL+AED + V + LEK+G T V +GL+A+E +
Sbjct: 1520 ILVAEDNDINIKVVVRQLEKLGYTAIVGINGLKALEIIGSFPIC---------------- 1563
Query: 1012 PDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVG 1071
LIL+DCQMP+MDG+ + +R+ E G R IPI+A+TA N + +C VG
Sbjct: 1564 -------LILLDCQMPQMDGFTCSTILRQIEPT-GQR-IPIIAMTA---NDSKDRCFEVG 1611
Query: 1072 MNAYLTKPIDSERMVSTI 1089
M+ YL+KP+ +R+ T+
Sbjct: 1612 MDDYLSKPVRVDRLQKTL 1629
>sp|Q8D5Z6|LUXQ_VIBVU Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio vulnificus
(strain CMCP6) GN=luxQ PE=3 SV=1
Length = 857
Score = 143 bits (361), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 150/294 (51%), Gaps = 44/294 (14%)
Query: 391 ILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKS 450
I+ G + AE S+L ARR+AE S ++ FLA MSHE+RTP+ I+G+ ++LK
Sbjct: 453 IIVQGQDITTLIDAEKQSNL-ARREAEQSAKTRADFLAKMSHEIRTPLNGILGIAQLLKR 511
Query: 451 --DDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVD 508
+D +Q +C S LL +LN ILD SK+E GK ++ +F+ L L +
Sbjct: 512 SVNDAENLKQVDVLC---NSGEHLLAVLNDILDFSKIEQGKFNIKKRDFNFYDTLNTLEN 568
Query: 509 MFSVQCSNHNVETVLDLSDNIPRN--VRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWC 566
++ C V ++ + IP + + D R+ QI NLI+N++KFT +G I
Sbjct: 569 IYRPICREKGVS--FEIHNQIPLDCQLHTDQVRLNQIMFNLISNAVKFTPAGRI------ 620
Query: 567 ENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSK 626
E +KF R+ + L +V DTG GID+SK
Sbjct: 621 ----------EVSFKLEKFARSEHS------------------ILSIQVSDTGIGIDESK 652
Query: 627 WETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQL 680
E++FE F Q D +TR++GG+GLGL+IV+ LV + GEI V + G+ L
Sbjct: 653 LESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQSELCKGSTFYL 706
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 63/145 (43%), Gaps = 27/145 (18%)
Query: 948 EGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGS 1007
+GL++LL ED + +K +V V DG QA+E L
Sbjct: 732 QGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEH--------------- 776
Query: 1008 PSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKC 1067
FDLILMD Q+PKM G EAT EIR E PI A TA A + +++
Sbjct: 777 --------AFDLILMDNQLPKMGGIEATREIR----ETLKLGTPIYACTADAQESTKQEF 824
Query: 1068 LGVGMNAYLTKPIDSERMVSTILRL 1092
L G N + KPI + + +L
Sbjct: 825 LSAGANRVIVKPIKEQELHDELLHF 849
>sp|Q9KLK7|LUXQ_VIBCH Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=luxQ PE=1 SV=1
Length = 857
Score = 142 bits (359), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 156/304 (51%), Gaps = 43/304 (14%)
Query: 381 ILVIGCICILILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAA 440
I+V G I I I+T G AE S ARR+AE S +++FLA MSHELRTP+
Sbjct: 440 IMVEGQI-ISIITQGQDITTIAEAEKQSQA-ARREAEESARVRAEFLAKMSHELRTPLNG 497
Query: 441 IIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQ 500
++G+ ++LK L +EQ V + S LL +LN ILD S++E GK ++ EF L
Sbjct: 498 VLGVSQLLKRTP-LNDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKNEFRL- 555
Query: 501 KELEELVD-MFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGH 559
KEL +D ++ C+ +E V++ + VR D R+ QI NL+NN+IKFT G
Sbjct: 556 KELVCAIDRIYRPLCNEKGLELVVNSNITTAAIVRSDQIRINQILFNLLNNAIKFTHQGS 615
Query: 560 IIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLA-LCFEVDDT 618
I R +L+ E + LA L +V DT
Sbjct: 616 I-----------------------------RVELQ--------LIEGDPLAQLVIQVVDT 638
Query: 619 GCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLM 678
G GI + +FE F Q + +TTR++GG+GLGL+IV +LV + G++ V + GT
Sbjct: 639 GIGIREQDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGIGTRF 698
Query: 679 QLYL 682
++ L
Sbjct: 699 EIQL 702
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 57/138 (41%), Gaps = 31/138 (22%)
Query: 950 LRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPS 1009
LR+LL ED +A K G VS V DGLQA+E L
Sbjct: 730 LRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELK------------------- 770
Query: 1010 ETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIV--ALTAHAMNADEKKC 1067
+DL+LMD Q+P +DG E T I+K ++P+V A TA + +
Sbjct: 771 ----IHDYDLVLMDNQLPYLDGVETTRTIKK------VLHLPVVVYACTADGLEETRQAF 820
Query: 1068 LGVGMNAYLTKPIDSERM 1085
G L KP+ + +
Sbjct: 821 FHAGAEYVLVKPLKEQTL 838
>sp|Q9XH58|ETR1_PELHO Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1
Length = 740
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 155/317 (48%), Gaps = 34/317 (10%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ D LT+EQ V I KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETD-LTSEQRLMVETILKSSNL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++L+ F+L ++ ++ S + L++S ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLDIATFNLHAVFRQVFNLIKPIASVKKLFITLNVSPDLPE 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
V GD R+ QI N++ N++KF+ G I + + ++ ++
Sbjct: 452 YVIGDEKRLVQIMLNVVGNAVKFSKEGIISVTAFVAKSESVRDP---------------- 495
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
+A + DN+ + +V D+G GI+ +F F Q P T+ GG+GLG
Sbjct: 496 ----RAPDFFPVSSDNQFYMRVQVKDSGSGINPQDMPKLFTKFAQSQPVATKNSGGSGLG 551
Query: 652 LSIVRTLVNKMGGEIKVVKKN-SPGTLMQLYLLLG---ASSESKQIY---------DADF 698
L+I + VN M G I + + S G + + LG S+E K DF
Sbjct: 552 LAISKRFVNLMDGHIWIDSEGPSKGCTVTFVVKLGIPEGSNEPKLPLMPKVSANNSQTDF 611
Query: 699 PNTVVVLATVGSMERMI 715
P V+L + RM+
Sbjct: 612 PGLKVLLMDENGISRMV 628
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 25/170 (14%)
Query: 926 GSSRRDQPCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQA 985
GS+ P S++N + GL++LL ++ + ++V +L +G V+ V
Sbjct: 590 GSNEPKLPLMPKVSANNSQTDFPGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSS--- 646
Query: 986 VEALNRMLAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEH 1045
E RM++ + ++ MD ++P +DG+E + I + +
Sbjct: 647 -EECLRMVSQDHK--------------------VVFMDVRVPGLDGHELAVRIHEKFMKR 685
Query: 1046 GARNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRLTKN 1095
R + IVALT++A ++ CL VGM + KP+ ++M + + +L ++
Sbjct: 686 HERPL-IVALTSNADKVTKENCLRVGMEGVILKPVSVDKMRNVLSKLLEH 734
>sp|P54302|LUXQ_VIBHA Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio harveyi
GN=luxQ PE=1 SV=1
Length = 859
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 35/271 (12%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE S ++ FLA MSHE+RTP+ I+G+ ++LK D T EQ + + + S
Sbjct: 472 ARREAEKSAQARADFLAKMSHEIRTPINGILGVAQLLK-DSVDTQEQKNQIDVLCHSGEH 530
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
LL +LN ILD SK+E GK ++ F + L +++ C+N VE V++ +
Sbjct: 531 LLAVLNDILDFSKIEQGKFNIQKHPFSFTDTMRTLENIYRPICTNKGVELVIENELDPNV 590
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
+ D R+ QI NL++N++KFT G I + E ++N+
Sbjct: 591 EIFTDQVRLNQILFNLVSNAVKFTPIGSIRLHAELEQFYGAENS---------------- 634
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
L E+ DTG GI+ K + +FE F Q + +TTR++GG+GLG
Sbjct: 635 ------------------VLVVELTDTGIGIESDKLDQMFEPFVQEESTTTREYGGSGLG 676
Query: 652 LSIVRTLVNKMGGEIKVVKKNSPGTLMQLYL 682
L+IV+ LV+ + G+++V GT + L
Sbjct: 677 LTIVKNLVDMLEGDVQVRSSKGGGTTFVITL 707
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 27/133 (20%)
Query: 948 EGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGS 1007
E L++LL ED + +K V DGL A+E L+
Sbjct: 733 ESLKVLLVEDNHTNAFILQAFCKKYKMQVDWAKDGLDAMELLS----------------- 775
Query: 1008 PSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKC 1067
DT +DLILMD Q+P + G E T EIR++ PI A TA
Sbjct: 776 -----DTT-YDLILMDNQLPHLGGIETTHEIRQNLR----LGTPIYACTADTAKETSDAF 825
Query: 1068 LGVGMNAYLTKPI 1080
+ G N + KPI
Sbjct: 826 MAAGANYVMLKPI 838
>sp|Q7MD16|LUXQ_VIBVY Autoinducer 2 sensor kinase/phosphatase LuxQ OS=Vibrio vulnificus
(strain YJ016) GN=luxQ PE=3 SV=1
Length = 857
Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/294 (33%), Positives = 150/294 (51%), Gaps = 44/294 (14%)
Query: 391 ILTNGVSKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKS 450
I+ G + AE S+L ARR+AE S ++ FLA MSHE+RTP+ I+G+ ++LK
Sbjct: 453 IIVQGQDITTLIDAEKQSNL-ARREAEQSAKTRADFLAKMSHEIRTPLNGILGIAQLLKR 511
Query: 451 --DDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVD 508
+D +Q +C S LL +LN ILD SK+E GK ++ +F+ L L +
Sbjct: 512 SVNDAENLKQVDVLC---NSGEHLLAVLNDILDFSKIEQGKFNIKKRDFNFYDTLNTLEN 568
Query: 509 MFSVQCSNHNVETVLDLSDNIPRN--VRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWC 566
++ C V ++ + IP + + D R+ QI NLI+N++KFT +G I
Sbjct: 569 IYRPICREKGVS--FEIHNQIPLDCQLHTDQVRLNQIMFNLISNAVKFTPAGRI------ 620
Query: 567 ENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSK 626
E ++F R+ + L +V DTG GID+SK
Sbjct: 621 ----------EVSFKLEQFARSEHS------------------ILSIQVSDTGIGIDESK 652
Query: 627 WETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQL 680
E++FE F Q D +TR++GG+GLGL+IV+ LV + GEI V + G+ L
Sbjct: 653 LESIFEPFVQADSLSTREYGGSGLGLTIVKNLVEMLEGEISVQSELCKGSTFYL 706
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 948 EGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGS 1007
+GL++LL ED + +K +V V DG QA+E L
Sbjct: 732 QGLKVLLVEDNHTNAFILKAFCQKYQMSVEWVQDGTQALEKLKEH--------------- 776
Query: 1008 PSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKC 1067
FDLILMD Q+PKM G EAT EIR++ PI A TA A + +++
Sbjct: 777 --------AFDLILMDNQLPKMGGIEATREIRETLK----LGTPIYACTADAQESTKQEF 824
Query: 1068 LGVGMNAYLTKPIDSERMVSTILRL 1092
L G N + KPI + + +L
Sbjct: 825 LSAGANRVIVKPIKEQELHDELLHF 849
>sp|Q54YH4|DHKB_DICDI Hybrid signal transduction histidine kinase B OS=Dictyostelium
discoideum GN=dhkB PE=1 SV=1
Length = 1969
Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 141/283 (49%), Gaps = 36/283 (12%)
Query: 403 RAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTV 462
R +L+ A RKAEA+N K FL +SHELRTP+ ++ +IL+ L + Q +
Sbjct: 941 RKQLMEADYALRKAEAANEAKVIFLTTVSHELRTPINGVLASADILERT-TLDSTQKEFL 999
Query: 463 CQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETV 522
IK S LL L+N ILD SK+E+GKME+ +F + K L+ + + S ++
Sbjct: 1000 NCIKLSGNYLLDLINDILDYSKIEAGKMEIIKYDFSILKMLDNSIRIVSKNIYEKGLDLC 1059
Query: 523 LDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDR 582
+ + N+P V GD R+ QI N ++NSIKFT+ G IIIR E+ D++ +
Sbjct: 1060 IFIDPNVPVIVNGDQRRIKQILLNFLSNSIKFTNHGQIIIRVKLESDDSTHS-------- 1111
Query: 583 KKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTT 642
+ F+V+D+G GI +F SF Q D +
Sbjct: 1112 ---------------------------LIKFDVEDSGIGIKTEHLNQLFASFSQIDSGNS 1144
Query: 643 RKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLG 685
RK+ GTGLGLSI + L MGG++KV + G+ + G
Sbjct: 1145 RKYQGTGLGLSISKRLCKMMGGDVKVKSEFGVGSTFSFTIPCG 1187
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 80/149 (53%), Gaps = 31/149 (20%)
Query: 951 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1010
+ILL ED + + K+L+ G V +G++AVE + + G+
Sbjct: 1840 KILLVEDNFVNVKIFSKLLKDSGYIFDVAHNGVEAVECVKK--------------GA--- 1882
Query: 1011 TPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIP--------IVALTAHAMNA 1062
+DLILMDCQMP+MDG+EAT IR+ E + + P IVALTA++
Sbjct: 1883 ------YDLILMDCQMPEMDGFEATTAIRELEKSNLIESPPSKKHSHVVIVALTANSGYK 1936
Query: 1063 DEKKCLGVGMNAYLTKPIDSERMVSTILR 1091
D++KCL VGMN +L KPI + ++ +++
Sbjct: 1937 DKQKCLSVGMNDFLQKPIKTSDILIQMIK 1965
>sp|Q9M7M1|ETR1_PRUPE Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1
Length = 738
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 135/267 (50%), Gaps = 28/267 (10%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS+
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSHL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++LE F+L E+ ++ S + L+L+ ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLEIATFNLHSVFREVHNLIKPVASVKKLSVSLNLAADLPV 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWC---ENLDTSKNTAEFPTDRKKFGRA 588
GD R+ QI N++ N++KF+ G I I + E+L + FP
Sbjct: 452 QAVGDEKRLMQIVLNVVGNAVKFSKEGSISITAFVAKSESLRDFRAPEFFPA-------- 503
Query: 589 FRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGT 648
+ DN L +V D+G GI+ +F F Q TR GG+
Sbjct: 504 ---------------QSDNHFYLRVQVKDSGSGINPQDIPKLFTKFAQTQSLATRNSGGS 548
Query: 649 GLGLSIVRTLVNKMGGEIKVVKKNSPG 675
GLGL+I + VN M G I ++ PG
Sbjct: 549 GLGLAICKRFVNLMEGHIW-IESEGPG 574
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 1019 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1078
++ MD MP +DGYE + I + ++ R + +VALT + ++ C+ VGM+ + K
Sbjct: 656 VVFMDVCMPGIDGYELAVRIHEKFTKRHERPV-LVALTGNIDKMTKENCMRVGMDGVILK 714
Query: 1079 PIDSERMVSTILRLTKN 1095
P+ ++M S + L ++
Sbjct: 715 PVSVDKMRSVLSELLEH 731
>sp|P40330|BVGS_BORPA Virulence sensor protein BvgS OS=Bordetella parapertussis (strain
12822 / ATCC BAA-587 / NCTC 13253) GN=bvgS PE=3 SV=2
Length = 1238
Score = 140 bits (353), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 46/279 (16%)
Query: 403 RAELISHL-DARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLE--ILKSDDQLTNEQY 459
RAEL+ L DA+ A+A+N K+ FLA MSHE+RTPM AIIG+LE +L+ DQ + Q
Sbjct: 699 RAELLRELHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPADQEPDRQS 758
Query: 460 STVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNV 519
V S+ +LL L+ ILD++K+E+GK +L L+ E + +F +
Sbjct: 759 IQVA--YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALPEGAIRLFDGLARQKGI 816
Query: 520 ETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFP 579
E VL +V DP R+ Q+ SNL+ N+IKFT+ G +++
Sbjct: 817 ELVLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVL----------------- 859
Query: 580 TDRKKFGRAFRTKLKQQANNAMNFREDNKLA-LCFEVDDTGCGIDQSKWETVFESFEQ-G 637
+ R D + A + F V DTGCGI ++ +F+ F Q G
Sbjct: 860 --------------------TVTARPDGEAAHVQFSVSDTGCGISEADQRQLFKPFSQVG 899
Query: 638 DPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGT 676
+ GTGLGLSI R LV MGG + V +++PG
Sbjct: 900 GSAEAGPAPGTGLGLSISRRLVELMGGTL--VMRSAPGV 936
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 1017 FDLILMDCQMPKMDGYE--ATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNA 1074
FD+++ DC MP ++GYE I ++ +G + TA A + ++C GM+
Sbjct: 1017 FDVVITDCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDD 1076
Query: 1075 YLTKPI 1080
L KPI
Sbjct: 1077 CLFKPI 1082
>sp|P16575|BVGS_BORPE Virulence sensor protein BvgS OS=Bordetella pertussis (strain
Tohama I / ATCC BAA-589 / NCTC 13251) GN=bvgS PE=1 SV=3
Length = 1238
Score = 139 bits (351), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 140/279 (50%), Gaps = 46/279 (16%)
Query: 403 RAELISHL-DARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLE--ILKSDDQLTNEQY 459
RAEL+ L DA+ A+A+N K+ FLA MSHE+RTPM AIIG+LE +L+ DQ + Q
Sbjct: 699 RAELLRKLHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPTDQEPDRQS 758
Query: 460 STVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNV 519
V S+ +LL L+ ILD++K+E+GK +L L+ E + +F +
Sbjct: 759 IQVA--YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRVLPEGAIRVFDGLARQKGI 816
Query: 520 ETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFP 579
E VL +V DP R+ Q+ SNL+ N+IKFT+ G +++
Sbjct: 817 ELVLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVL----------------- 859
Query: 580 TDRKKFGRAFRTKLKQQANNAMNFREDNKLA-LCFEVDDTGCGIDQSKWETVFESFEQ-G 637
A+ R D A + F V DTGCGI ++ +F+ F Q G
Sbjct: 860 --------------------AVTARPDGDAAHVQFSVSDTGCGISEADQRQLFKPFSQVG 899
Query: 638 DPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGT 676
+ GTGLGLSI R LV MGG + V +++PG
Sbjct: 900 GSAEAGPAPGTGLGLSISRRLVELMGGTL--VMRSAPGV 936
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 1017 FDLILMDCQMPKMDGYEATIEIRKSESE--HGARNIPIVALTAHAMNADEKKCLGVGMNA 1074
FD+++ DC MP + GYE IR +E+ +G + TA A + ++C GM+
Sbjct: 1017 FDVVITDCNMPGISGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDD 1076
Query: 1075 YLTKPI 1080
L KPI
Sbjct: 1077 CLFKPI 1082
>sp|P26762|BVGS_BORBR Virulence sensor protein BvgS OS=Bordetella bronchiseptica (strain
ATCC BAA-588 / NCTC 13252 / RB50) GN=bvgS PE=3 SV=2
Length = 1238
Score = 139 bits (351), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 140/279 (50%), Gaps = 46/279 (16%)
Query: 403 RAELISHL-DARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLE--ILKSDDQLTNEQY 459
RAEL+ L DA+ A+A+N K+ FLA MSHE+RTPM AIIG+LE +L+ DQ + Q
Sbjct: 699 RAELLRELHDAKESADAANRAKTTFLATMSHEIRTPMNAIIGMLELALLRPADQEPDRQS 758
Query: 460 STVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNV 519
V S+ +LL L+ ILD++K+E+GK +L L+ E + +F +
Sbjct: 759 IQVA--YDSARSLLELIGDILDIAKIEAGKFDLAPVRTALRALPEGAIRVFDGLARQKGI 816
Query: 520 ETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFP 579
E VL +V DP R+ Q+ SNL+ N+IKFT+ G +++
Sbjct: 817 ELVLKTDIVGVDDVLIDPLRMKQVLSNLVGNAIKFTTEGQVVL----------------- 859
Query: 580 TDRKKFGRAFRTKLKQQANNAMNFREDNKLA-LCFEVDDTGCGIDQSKWETVFESFEQ-G 637
+ R D + A + F V DTGCGI ++ +F+ F Q G
Sbjct: 860 --------------------TVTARPDGEAAHVQFSVSDTGCGISEADQRQLFKPFSQVG 899
Query: 638 DPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGT 676
+ GTGLGLSI R LV MGG + V +++PG
Sbjct: 900 GSAEAGPAPGTGLGLSISRRLVELMGGTL--VMRSAPGV 936
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 1017 FDLILMDCQMPKMDGYE--ATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNA 1074
FD+++ DC MP ++GYE I ++ +G + TA A + ++C GM+
Sbjct: 1017 FDVVITDCNMPGINGYELARRIRAAEAAPGYGRTRCILFGFTASAQMDEAQRCRAAGMDD 1076
Query: 1075 YLTKPI 1080
L KPI
Sbjct: 1077 CLFKPI 1082
>sp|P58356|TORS_ECO57 Sensor protein TorS OS=Escherichia coli O157:H7 GN=torS PE=3 SV=1
Length = 914
Score = 139 bits (349), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 150/308 (48%), Gaps = 54/308 (17%)
Query: 397 SKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTN 456
++ +L+ +I H AR +AE ++ KS FLA MSHE+RTP+ I+G ++L +D+ N
Sbjct: 418 ARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLL-ADNPALN 476
Query: 457 EQYSTVCQIKKSSYALLRLLNRILDLSKVESG--KMELENTEFDLQKELEELVDMFSVQC 514
Q + I S +LL +LN ILD S +E+G + + + F+ + LE + + S +
Sbjct: 477 AQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRV 536
Query: 515 SNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKN 574
+ ++D++P + GDP R+ Q+ +NL++N+++FT G I++R
Sbjct: 537 KGRPIRLATAIADDVPTALMGDPRRIRQVITNLLSNALRFTDEGQIVLRSR--------- 587
Query: 575 TAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESF 634
TD +++ EV+D+GCGID +K +F+ F
Sbjct: 588 -----TDGEQW--------------------------LVEVEDSGCGIDPAKLAEIFQPF 616
Query: 635 EQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIY 694
Q + K GGTGLGL+I L MGGE+ G+ L L L ++
Sbjct: 617 IQ----VSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPL-------RVA 665
Query: 695 DADFPNTV 702
A P TV
Sbjct: 666 TAPVPKTV 673
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 67/160 (41%), Gaps = 36/160 (22%)
Query: 942 NQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRR 1001
NQ L+GLR+LL ED PL Q + ++L GA V + + QA+E L
Sbjct: 674 NQAVRLDGLRLLLIEDNPLTQRITVEMLNTSGAQVVAIGNAAQALETLQ----------- 722
Query: 1002 SLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIP---IVALTAH 1058
++ F L+D +P ++G ++ AR P ++ +AH
Sbjct: 723 -----------NSEPFAAALVDFDLPDVNGITLARQL--------ARQYPSLVLIGFSAH 763
Query: 1059 AMNADEKKCLGVGMNAYLTKPIDSE---RMVSTILRLTKN 1095
++ ++ + KP+ E ++++ L+L N
Sbjct: 764 VIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQAN 803
>sp|P39453|TORS_ECOLI Sensor protein TorS OS=Escherichia coli (strain K12) GN=torS PE=1
SV=4
Length = 914
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 151/308 (49%), Gaps = 54/308 (17%)
Query: 397 SKEMKLRAELISHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTN 456
++ +L+ +I H AR +AE ++ KS FLA MSHE+RTP+ I+G ++L +D+ N
Sbjct: 418 ARTAELQELVIEHRQARAEAEKASQAKSAFLAAMSHEIRTPLYGILGTAQLL-ADNPALN 476
Query: 457 EQYSTVCQIKKSSYALLRLLNRILDLSKVESG--KMELENTEFDLQKELEELVDMFSVQC 514
Q + I S +LL +LN ILD S +E+G + + + F+ + LE + + S +
Sbjct: 477 AQRDDLRAITDSGESLLTILNDILDYSAIEAGGKNVSVSDEPFEPRPLLESTLQLMSGRV 536
Query: 515 SNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKN 574
+ ++D++P + GDP R+ Q+ +NL++N+++FT G+II+R
Sbjct: 537 KGRPIRLATAIADDMPCALMGDPRRIRQVITNLLSNALRFTDEGYIILRSR--------- 587
Query: 575 TAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESF 634
TD +++ EV+D+GCGID +K +F+ F
Sbjct: 588 -----TDGEQW--------------------------LVEVEDSGCGIDPAKLAEIFQPF 616
Query: 635 EQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIY 694
Q + K GGTGLGL+I L MGGE+ G+ L L L ++
Sbjct: 617 VQ----VSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPL-------RVA 665
Query: 695 DADFPNTV 702
A P TV
Sbjct: 666 TAPVPKTV 673
Score = 41.6 bits (96), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 942 NQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRR 1001
NQ L+GLR+LL ED PL Q + ++L+ GA + V + QA+E L
Sbjct: 674 NQAVRLDGLRLLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQ----------- 722
Query: 1002 SLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMN 1061
++ F L+D +P +DG ++ + ++ ++ +AH ++
Sbjct: 723 -----------NSEPFAAALVDFDLPDIDGITLARQLAQQYP-----SLVLIGFSAHVID 766
Query: 1062 ADEKKCLGVGMNAYLTKPIDSE 1083
++ + KP+ E
Sbjct: 767 ETLRQRTSSLFRGIIPKPVPRE 788
>sp|Q41342|ETR1_SOLLC Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=1 SV=1
Length = 754
Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 140/292 (47%), Gaps = 25/292 (8%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ D LT EQ V I KSS
Sbjct: 347 ARREAEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQETD-LTPEQRLMVETILKSSNL 405
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++L+ F+L E+ + S + L LS ++P
Sbjct: 406 LATLINDVLDLSRLEDGSLQLDIGTFNLHALFREVHSLIKPIASVKKLFVTLSLSSDLPE 465
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
V GD R+ QI N++ N++KF+ G++ I + D+ ++
Sbjct: 466 YVIGDEKRLMQILLNVVGNAVKFSKEGNVSISAFVAKSDSLRD----------------- 508
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
+A +N L ++ DTG GI +F F Q T GGTGLG
Sbjct: 509 ---PRAPEFFAVPSENHFYLRVQIKDTGIGITPQDIPNLFSKFTQSQALATTNSGGTGLG 565
Query: 652 LSIVRTLVNKMGGEIKV----VKKNSPGTLMQLYLLLGASSESKQIYDADFP 699
L+I + VN M G I + + K S + + G ++ESK + P
Sbjct: 566 LAICKRFVNLMEGHIWIESEGLGKGSTAIFIIKLGIPGRANESKLPFVTKLP 617
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 1014 TPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMN 1073
T +++MD M +D YE + I + + R + IVALT + ++ C+ VGM+
Sbjct: 668 THEHKVVIMDVSMQGIDCYEVAVVIHERFGKRHGRPL-IVALTGNTDRVTKENCMRVGMD 726
Query: 1074 AYLTKPIDSERMVSTILRLTKN 1095
+ KP+ +M S + L ++
Sbjct: 727 GVILKPVSVYKMRSVLSELLEH 748
>sp|O81122|ETR1_MALDO Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1
Length = 741
Score = 137 bits (344), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 131/255 (51%), Gaps = 21/255 (8%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I +SS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTAEQRLMVETILRSSNL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++LE F+L E+ +M S + L+++ ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLEIATFNLHSVFREVHNMIKPVASIKRLSVTLNIAADLPM 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
GD R+ Q N++ N++KF+ G I I + ++ ++ FR
Sbjct: 452 YAIGDEKRLMQTILNVVGNAVKFSKEGSISITAFVAKSESLRD--------------FR- 496
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
A + + DN L +V D+G GI+ +F F Q TR GG+GLG
Sbjct: 497 -----APDFFPVQSDNHFYLRVQVKDSGSGINPQDIPKLFTKFAQTQALATRNSGGSGLG 551
Query: 652 LSIVRTLVNKMGGEI 666
L+I + VN M G I
Sbjct: 552 LAICKRFVNLMEGHI 566
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 25/147 (17%)
Query: 949 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1008
GL++L+ +D + + V +L +G V+ AV ++ +L S +
Sbjct: 613 GLKVLVMDDNGVSRSVTKGLLAHLGCDVT-------AVSLIDELLHVISQEHK------- 658
Query: 1009 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1068
++ MD MP +DGYE + I + ++ R + +VALT ++ C+
Sbjct: 659 ----------VVFMDVSMPGIDGYELAVRIHEKFTKRHERPV-LVALTGSIDKITKENCM 707
Query: 1069 GVGMNAYLTKPIDSERMVSTILRLTKN 1095
VG++ + KP+ ++M S + L ++
Sbjct: 708 RVGVDGVILKPVSVDKMRSVLSELLEH 734
>sp|P49333|ETR1_ARATH Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1
Length = 738
Score = 134 bits (338), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 131/258 (50%), Gaps = 31/258 (12%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSNL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++LE F+L E++++ + L+L+ ++P
Sbjct: 392 LATLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPE 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEF---PTDRKKFGRA 588
V GD R+ QI N++ N++KF+ G I + DT A+F PT G
Sbjct: 452 FVVGDEKRLMQIILNIVGNAVKFSKQGSISVTALVTKSDT--RAADFFVVPT-----GSH 504
Query: 589 FRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGT 648
F ++K V D+G GI+ +F F Q TR GG+
Sbjct: 505 FYLRVK--------------------VKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGS 544
Query: 649 GLGLSIVRTLVNKMGGEI 666
GLGL+I + VN M G I
Sbjct: 545 GLGLAISKRFVNLMEGNI 562
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%)
Query: 1019 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1078
++ MD MP ++ Y+ + I + ++ + +VAL+ + + ++KC+ G++ L K
Sbjct: 655 VVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLK 714
Query: 1079 PI 1080
P+
Sbjct: 715 PV 716
>sp|Q9XH57|ETR2_PELHO Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1
Length = 741
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 137/264 (51%), Gaps = 22/264 (8%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V + KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETVLKSSNL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++L+ F+L L E+ ++ S + L+++ ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLDIGTFNLHALLREVHNLIKPIASVKKLCISLNVATDLPE 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
GD R+ QI N++ N++KF+ G+I I + ++ ++
Sbjct: 452 YAVGDEKRLVQIILNVVGNAVKFSKEGNISITAFVAKSESLRDP---------------- 495
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
+A + +N+ L +V D+G GI+ +F F Q P T+ GG+GLG
Sbjct: 496 ----RAPDFFPICGENQFYLRVQVKDSGLGINPQDIPRLFTKFAQTQPVATKNSGGSGLG 551
Query: 652 LSIVRTLVNKMGGEIKVVKKNSPG 675
L+I + VN M G I + PG
Sbjct: 552 LAICKRFVNLMEGHIW-IDSEGPG 574
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 949 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1008
GL++LL +D + + V +L +G V+ V + L R+++ +
Sbjct: 613 GLKVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSS----DELLRVVSQD------------ 656
Query: 1009 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1068
+ ++ MD MP++DG+E + I + R + IVALT + + C
Sbjct: 657 --------YKVVFMDVCMPEVDGFEIAVRIHEKFMTRHERPL-IVALTGNIDQVTKDNCT 707
Query: 1069 GVGMNAYLTKPIDSERM 1085
VGM + KP+ ++M
Sbjct: 708 RVGMEGVVLKPVSIDKM 724
>sp|Q54Q69|DHKG_DICDI Hybrid signal transduction histidine kinase G OS=Dictyostelium
discoideum GN=dhkG PE=3 SV=1
Length = 3432
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 153/304 (50%), Gaps = 35/304 (11%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIK-KSSY 470
A+ +AE +N KS F++NMSHE+RTP+ IIG +E+LKS + L N + I KSS
Sbjct: 2474 AKEEAEKANKAKSDFISNMSHEMRTPLNHIIGSIELLKSYNHLFNSDQKELLDISAKSSE 2533
Query: 471 ALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLS---D 527
+LL ++N ILDLSKVE GK +L T F+L LE+ + S V L ++
Sbjct: 2534 SLLFMVNNILDLSKVEQGKTKLNLTNFNLVSFLEDSICAISPNAHLKGVYIALFINPCLS 2593
Query: 528 NIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKK--- 584
IP V GD + Q+ NL+ N+IKFT SG + I+ L+ S N T+ KK
Sbjct: 2594 KIP--VIGDINILRQVIVNLLTNAIKFTESGQVYIK-----LNLSINNNPTTTNNKKQLN 2646
Query: 585 ----------------FGRAFRTKLKQQANNAMNFREDNKLALCF----EVDDTGCGIDQ 624
T + N + ++++ K C+ EV D+G GI
Sbjct: 2647 TDNDGDDDDDDDNENLDENNEDTSIDLDDNGKVIYQKNPKSNQCYIVNIEVVDSGIGIKN 2706
Query: 625 SKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLV-NKMGGEIKVVKKNSPGTLMQLYLL 683
+ +F+ F Q + + R + GTGLGLSIV+ LV N M G+I V K G+ +
Sbjct: 2707 EDFGKLFQRFSQIECGSNRAYDGTGLGLSIVKDLVCNLMKGDIGVKSKVGVGSTFHFCVE 2766
Query: 684 LGAS 687
LG S
Sbjct: 2767 LGKS 2770
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 950 LRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPS 1009
L+IL+ ED + + K+L K+G + P ALN + + ++
Sbjct: 3304 LKILIVEDNEMNANIMFKMLAKLG--IQCEPH-----LALNGLEGVKKAKNE-------- 3348
Query: 1010 ETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLG 1069
+DLI+MD QMP M G AT IRK E + PIVA+TA AMN + K L
Sbjct: 3349 ------EYDLIIMDIQMPVMCGLTATSLIRKHEGT--KKRTPIVAITASAMNGEMSKALA 3400
Query: 1070 VGMNAYLTKPIDSERMVSTILR 1091
G + YL+KP+ + + I R
Sbjct: 3401 AGCDDYLSKPLQLKDLRYVINR 3422
>sp|Q3S4A7|AHK5_ARATH Histidine kinase 5 OS=Arabidopsis thaliana GN=AHK5 PE=2 SV=1
Length = 922
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 140/258 (54%), Gaps = 16/258 (6%)
Query: 425 QFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSK 484
Q LA MSHE+R+P++ ++G+ EIL S +L EQ + + S +L+L+N ILDLSK
Sbjct: 369 QMLATMSHEIRSPLSGVVGMAEIL-STTKLDKEQRQLLNVMISSGDLVLQLINDILDLSK 427
Query: 485 VESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIF 544
VESG M LE T+F +E+ + V + ++ +++D++P V GD R+ QI
Sbjct: 428 VESGVMRLEATKF-RPREVVKHVLQTAAASLKKSLTLEGNIADDVPIEVVGDVLRIRQIL 486
Query: 545 SNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFR 604
+NLI+N+IKFT G++ I+ + F D A ++ N +
Sbjct: 487 TNLISNAIKFTHEGNVGIKLQV------ISEPSFVRDN-----ALNADTEEHEQNGLT-- 533
Query: 605 EDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGG 664
+ + +C +V DTG GI ++ +F+ + Q RK+GGTGLGL+I + LV MGG
Sbjct: 534 -ETSVWICCDVWDTGIGIPENALPCLFKKYMQASADHARKYGGTGLGLAICKQLVELMGG 592
Query: 665 EIKVVKKNSPGTLMQLYL 682
++ V + S G+ L
Sbjct: 593 QLTVTSRVSEGSTFTFIL 610
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 46/158 (29%)
Query: 951 RILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSE 1010
+ILL ED + +VA +++++G T+ + +G++A+ A+N
Sbjct: 779 KILLVEDNKINIMVAKSMMKQLGHTMDIANNGVEAITAIN-------------------- 818
Query: 1011 TPDTPRFDLILMDCQMPKMDGYEAT-------------------IEIRKSESEH----GA 1047
+ +DL+LMD MP +DG +AT ++I SE+E
Sbjct: 819 ---SSSYDLVLMDVCMPVLDGLKATRLIRSYEETGNWNAAIEAGVDISTSENEQVCMRPT 875
Query: 1048 RNIPIVALTAHAMNADEKKCLGVGMNAYLTKPIDSERM 1085
+PI+A+TA+ + ++C GM+++++KP+ +++
Sbjct: 876 NRLPIIAMTANTLAESSEECYANGMDSFISKPVTLQKL 913
>sp|O49187|ETR2_SOLLC Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1
Length = 736
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 149/315 (47%), Gaps = 35/315 (11%)
Query: 396 VSKEMKLRAELISH---LD-ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSD 451
+ + M+ R LI LD ARR+AE + ++ FL M+HE+RTPM A++ L +L+ +
Sbjct: 311 LEESMRARDLLIEQNVALDLARREAETAVRARNDFLGVMNHEMRTPMHAVVALSSLLQ-E 369
Query: 452 DQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFS 511
+L EQ V I KSS L L+N +LDLS++E G ++L+ F+L E++++
Sbjct: 370 SELIPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDVGTFNLHALFREVLNLIK 429
Query: 512 VQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHI---IIRGWCEN 568
+ + L LS + P GD R+ QI N++ N++KF+ G + + E+
Sbjct: 430 PVAAVKKLFVTLSLSSDFPEVAIGDEKRLMQILLNVVGNAVKFSKEGSVSVSAVNAKSES 489
Query: 569 LDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWE 628
L + FP + +N L +V DTG GI+ +
Sbjct: 490 LIDPRAPEFFPV-----------------------QSENHFYLRVQVKDTGSGINPQDFP 526
Query: 629 TVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKV----VKKNSPGTLMQLYLLL 684
+F F Q T+ GTGLGL+I + VN M G I + V K S + +
Sbjct: 527 KLFCKFAQNQEPATKNSAGTGLGLAICKRFVNLMEGHIWIESEGVGKGSTAIFIVKLGIP 586
Query: 685 GASSESKQIYDADFP 699
G +ESK + A P
Sbjct: 587 GRLNESKLPFTAGLP 601
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/157 (19%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 933 PCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRM 992
P ++ +++ + +GL++L+ +D ++V +L +G V+ + G + + L R
Sbjct: 595 PFTAGLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGDECLRILTR- 653
Query: 993 LAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPI 1052
+++MD + M+ Y+ + + + + R + I
Sbjct: 654 -----------------------EHKVLIMDASITGMNCYDVAVSVHEKFGKRLERPL-I 689
Query: 1053 VALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTI 1089
VALT + ++ CL VGM+ + KP+ ++M S +
Sbjct: 690 VALTGNTDQVTKENCLRVGMDGVILKPVSIDKMRSVL 726
>sp|O49230|ETR1_BRAOL Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1
Length = 735
Score = 131 bits (330), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 138/284 (48%), Gaps = 29/284 (10%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V + KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETVLKSSSL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++LE F+L E++++ + L+L+ ++P
Sbjct: 392 LATLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPE 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEF--PTDRKKFGRAF 589
V GD R+ QI N++ N++KF+ G I + D F PT G F
Sbjct: 452 FVVGDEKRLMQIILNIVGNAVKFSKQGSISVTALVTKSDNRAPPDFFVVPT-----GSHF 506
Query: 590 RTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTG 649
++K V D G GI+ +F F Q TR GG+G
Sbjct: 507 YLRVK--------------------VKDLGAGINPQDIPKLFTKFAQTQSLATRSSGGSG 546
Query: 650 LGLSIVRTLVNKMGGEIKVVKKN-SPGTLMQLYLLLGASSESKQ 692
LGL+I + VN M G I + + G + L S+ESKQ
Sbjct: 547 LGLAISKRFVNLMEGNIWIESEGVGKGCTAIFDVKLAISNESKQ 590
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 1019 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1078
++ MD P ++ Y+ + I + ++ R + +VALT + + ++KC+ G++ L K
Sbjct: 653 VVFMDVCTPGVENYQIALRIHEKFTKRHQRPL-LVALTGNTDKSTKEKCMSFGLDGVLLK 711
Query: 1079 PIDSERM 1085
P+ + M
Sbjct: 712 PVSLDNM 718
>sp|Q9ZWL6|ETR1_PASED Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1
Length = 738
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 27/258 (10%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM A+I L +L+ + +LT EQ V I KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAVIALSSLLQ-ETELTPEQRLMVETILKSSNL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLSK+E G ++L++ F+L E++++ S + +L+L+ ++P
Sbjct: 392 LATLINDVLDLSKLEDGSLQLDSGTFNLHAVFREVLNLIKPIASVKKLLLLLNLAPDLPE 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAE---FPTDRKKFGRA 588
GD R+ QI N++ N++KF+ G I I L++ ++ FPT
Sbjct: 452 YAVGDEKRLIQIILNIVGNAMKFSKEGSISITAIVAKLESLRDARVPDFFPTP------- 504
Query: 589 FRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGT 648
+N L +V D+G GI+ +F F Q + R G+
Sbjct: 505 ----------------SENHFYLRVQVKDSGVGINPQDIPKLFIKFAQTQTTGARNSSGS 548
Query: 649 GLGLSIVRTLVNKMGGEI 666
GLGL+I R VN M G I
Sbjct: 549 GLGLAICRRFVNLMDGHI 566
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 72/157 (45%), Gaps = 27/157 (17%)
Query: 933 PCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRM 992
P S + + + GL++LL +D + ++V +L +G V+ V + +
Sbjct: 597 PFMSKVAVDHGQTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIR----- 651
Query: 993 LAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPI 1052
+A++ R ++ MD MP +G+EA + + + ++ R + +
Sbjct: 652 VASQDHR-------------------VVFMDVGMP--EGFEAAVRLHEKFTKRHERPL-V 689
Query: 1053 VALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTI 1089
VALTA ++ C+ VGM+ + KP+ ++M S +
Sbjct: 690 VALTASTDRMTKENCMRVGMDGAILKPVSVDKMRSVL 726
>sp|Q38846|ERS1_ARATH Ethylene response sensor 1 OS=Arabidopsis thaliana GN=ERS1 PE=1
SV=1
Length = 613
Score = 129 bits (323), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/253 (34%), Positives = 130/253 (51%), Gaps = 21/253 (8%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
AR++AE + + ++ FLA M+HE+RTPM AII L L + +L+ EQ + I KSS
Sbjct: 333 ARQEAEMAVHARNDFLAVMNHEMRTPMHAII-SLSSLLLETELSPEQRVMIETILKSSNL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
+ L++ +LDLS++E G + LEN F LQ EE++ + S + T L LS ++P
Sbjct: 392 VATLISDVLDLSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLILSADLPT 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
GD R+ Q N++ N++KFT G+I I ++ ++ E P+ F
Sbjct: 452 YAIGDEKRLMQTILNIMGNAVKFTKEGYISIIA---SIMKPESLQELPSPE------FFP 502
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
L D+ LC +V DTGCGI +F F Q T R H G GLG
Sbjct: 503 VLS-----------DSHFYLCVQVKDTGCGIHTQDIPLLFTKFVQPRTGTQRNHSGGGLG 551
Query: 652 LSIVRTLVNKMGG 664
L++ + V MGG
Sbjct: 552 LALCKRFVGLMGG 564
>sp|O48929|ETR1_TOBAC Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1
Length = 738
Score = 126 bits (317), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 139/295 (47%), Gaps = 31/295 (10%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS
Sbjct: 331 ARREAEMAVRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSNL 389
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++L+ F+L +++++ S N + L P
Sbjct: 390 LATLINDVLDLSRLEDGSLQLDVGTFNLHVLFRKVLNLIKPIASVKNCLSRLTCLQICPE 449
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWC---ENLDTSKNTAEFPTDRKKFGRA 588
GD R+ QI N++ N++KF+ G + I E+L + FP
Sbjct: 450 FAIGDEKRLMQILLNVVGNAVKFSKEGSVSISAVAAKSESLSDPRAPEFFPV-------- 501
Query: 589 FRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGT 648
+ +N L +V DTG GI+ +F F Q T+ GGT
Sbjct: 502 ---------------QSENHFYLRVQVKDTGSGINPQDIPKLFCKFAQNQALATKSSGGT 546
Query: 649 GLGLSIVRTLVNKMGGEIKV----VKKNSPGTLMQLYLLLGASSESKQIYDADFP 699
GLGL+I + VN M G I + + K S + + G S+E K + P
Sbjct: 547 GLGLAISKRFVNLMEGHIWIESEGLGKGSTAIFIVKLGIPGRSNEPKLPFMPRLP 601
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 72/156 (46%), Gaps = 25/156 (16%)
Query: 940 SSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSR 999
+++ + +GL++L+ +D ++V +L +G V+ V G + + L
Sbjct: 602 ANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVL---------- 651
Query: 1000 RRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHA 1059
T ++ MD +P +D YE ++I + +H R + IVALT +
Sbjct: 652 --------------TQEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNRPL-IVALTGNT 696
Query: 1060 MNADEKKCLGVGMNAYLTKPIDSERMVSTILRLTKN 1095
++ C+ VGM+ + KP+ ++M S + L ++
Sbjct: 697 DRVTKENCMRVGMDGVILKPVSVDKMRSVLSELLEH 732
>sp|Q9HUI3|ARUS_PSEAE Sensor histidine kinase AruS OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=aruS PE=3
SV=1
Length = 998
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 36/265 (13%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
A+ +AEA++ KS+FLA MSHE+RTP+ I+G+ E+L+ + L + + +
Sbjct: 496 AKDQAEAADRAKSRFLATMSHEIRTPLNGILGMAELLR-EASLGERDRQRLRALATAGEG 554
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
LL +LN +L +++E E +F L+ LE+++ + + + L L +
Sbjct: 555 LLAILNEVLHFARLEEAPDVPEAVDFSLRSLLEDVLTLLEPRARENATRLDLWLDPQVHD 614
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
RG + Q+ +NL+ N++KFT +G + R
Sbjct: 615 GHRGAEQFLRQVLTNLLGNAVKFTEAGEV-----------------------------RV 645
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
++++ A +A + R L V D G GI + E +FE F QG + TR++GGTGLG
Sbjct: 646 RVERLARSAGSER------LRLSVADDGIGIPEEMRERIFERFTQGGDAVTRRYGGTGLG 699
Query: 652 LSIVRTLVNKMGGEIKVVKKNSPGT 676
L+I + LV +GG I V + G+
Sbjct: 700 LAISKRLVEALGGRIGVESRVGQGS 724
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 24/152 (15%)
Query: 950 LRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPS 1009
L +LL ED L + VA +LE+ G V + D A+ AL R
Sbjct: 750 LEVLLVEDVALNREVAQGLLERDGHRVMLAEDAGPAL-ALCRQR---------------- 792
Query: 1010 ETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLG 1069
RFDLIL+D +P M G E IR+ + + R PI A TA ++
Sbjct: 793 ------RFDLILLDMHLPGMAGLELCAGIRR-QLDGLNRATPIFAFTASIQPDMVRRYFA 845
Query: 1070 VGMNAYLTKPIDSERMVSTILRLTKNMPSEAT 1101
GM L KP+ + + + + ++P+ A
Sbjct: 846 AGMQGVLGKPLRMDELRRALGEVGTSVPALAV 877
>sp|Q9P7Q7|MAK1_SCHPO Peroxide stress-activated histidine kinase mak1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mak1 PE=3 SV=1
Length = 1639
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 135/269 (50%), Gaps = 38/269 (14%)
Query: 408 SHLDARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKK 467
S+++A+R + K Q+L+NMSHE+RTP+ I G++ L + Q++ EQ S I++
Sbjct: 983 SNIEAQRIVRS----KMQYLSNMSHEIRTPLIGITGMVSFLL-ETQMSAEQLSYARIIQQ 1037
Query: 468 SSYALLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSD 527
S+ +LL ++N ILDLSKV +G M+L + F ++ +E+ + + +E +
Sbjct: 1038 SAKSLLTVINDILDLSKVRAGMMKLTSQRFSVRAMMEDANETLGTLAFSKGIELNYTVDI 1097
Query: 528 NIPRNVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGR 587
++P V GD R+ Q+ N+I N+IKFT+ G + R E +D S NT
Sbjct: 1098 DVPDIVFGDNMRMRQVALNVIGNAIKFTNVGEVFTRCSVEKIDYSTNT------------ 1145
Query: 588 AFRTKLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGG 647
+ L +E DTG G ++ +F+ F Q + ST +HGG
Sbjct: 1146 ---------------------VVLKWECIDTGQGFNRDDQLQMFKPFSQVESSTLPRHGG 1184
Query: 648 TGLGLSIVRTLVNKMGGEIKVVKKNSPGT 676
+GLGL I + LV G + + GT
Sbjct: 1185 SGLGLVISKELVELHNGSMSCQSRRGVGT 1213
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 75/148 (50%), Gaps = 23/148 (15%)
Query: 949 GLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSP 1008
G +LLAED + V + LE++G V DGLQ VE R
Sbjct: 1505 GFSVLLAEDNIINIKVISRYLERIGVKFKVTMDGLQCVEEWKR----------------- 1547
Query: 1009 SETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCL 1068
E P+ + LILMD QMP MDGY+A EIRK E E+ +PIVAL+A+A+ C
Sbjct: 1548 -EKPNF--YSLILMDLQMPVMDGYQACNEIRKYELENDYPKVPIVALSANALPHVVLSCK 1604
Query: 1069 GVGMNAYLTKPIDSERM---VSTILRLT 1093
G ++YL KPI + + +S IL T
Sbjct: 1605 DSGFDSYLAKPITLQHLSLIISGILNYT 1632
>sp|Q9SSY6|ETR1_CUCSA Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1
Length = 740
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 126/255 (49%), Gaps = 22/255 (8%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE +N+ ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS
Sbjct: 333 ARREAETANHARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSNL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++L+ F+L +E++++ + L L ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGLDLPV 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
GD R+ Q N++ N++KF+ G I I +T FR
Sbjct: 452 FAVGDEKRLMQAILNVVGNAVKFSKEGSISISAIVAKAET-----------------FR- 493
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
+ + + D+ L +V DTG GI +F F Q R G+GLG
Sbjct: 494 --EIRVPDFHPVPSDSHFYLRVQVKDTGSGISPQDIPKLFTKFAQTTVG-PRNSCGSGLG 550
Query: 652 LSIVRTLVNKMGGEI 666
L+I + VN M G I
Sbjct: 551 LAICKRFVNLMEGHI 565
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 1019 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1078
++ MD P +DGYE I IR+ ++ R +V LT ++ ++ CL GM+ + K
Sbjct: 658 VVFMDICTPGVDGYELAIRIREKFAKCHERPF-MVVLTGNSDKVTKESCLRAGMDGLILK 716
Query: 1079 PIDSERMVSTILRLTK 1094
P+ ++M S + L +
Sbjct: 717 PVSIDKMRSVLSELIE 732
>sp|Q54RP6|DHKL_DICDI Hybrid signal transduction histidine kinase L OS=Dictyostelium
discoideum GN=dhkL PE=3 SV=1
Length = 1709
Score = 120 bits (300), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 132/257 (51%), Gaps = 37/257 (14%)
Query: 427 LANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVE 486
L+ MSH++RTPM+ IIG+ ++L D L+ Q+ + IK SS LL ++N ILD+SK+E
Sbjct: 835 LSMMSHDIRTPMSNIIGMADLLL-DTSLSQHQHHYLEIIKNSSNTLLTIINDILDISKIE 893
Query: 487 SGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGDPGRVFQIFSN 546
+GK++++ FD + ++V+ + + + +E + + IP + G R+ QI +N
Sbjct: 894 AGKLDIDYESFDFNATVSQVVESMAQRVQSKGLELLSYVDPKIPNILIGPSSRLNQILTN 953
Query: 547 LINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFRED 606
L+ NS+KFT G I I C +N D
Sbjct: 954 LLGNSLKFTDKGEISI--CC---------------------------------LLNDETD 978
Query: 607 NKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVN-KMGGE 665
++ + +V DTG GI + +F++F Q + + TR++GG+GLGL+I + LV+ GE
Sbjct: 979 SEYEIKVDVRDTGIGIKKEALPLLFKAFTQAEGTITRQYGGSGLGLAICKELVHLAFNGE 1038
Query: 666 IKVVKKNSPGTLMQLYL 682
I V + G+ L
Sbjct: 1039 ISVESQYGHGSTFTCIL 1055
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 74/146 (50%), Gaps = 22/146 (15%)
Query: 951 RILLAEDTPL-IQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPS 1009
++L+ +D + IQI++ K+L+ VG V V G A+ +N+ + +S
Sbjct: 1570 KVLVVDDNHINIQILS-KMLQTVGCEVDSVLSGADALAKINQS-SGDS------------ 1615
Query: 1010 ETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLG 1069
+D I +D QMP MDG++ + +IR+ E + + I+A TA+ D+ KC
Sbjct: 1616 -------YDAIFLDIQMPDMDGFQVSRKIREREKKFSLPRVAIIATTANVFKEDQLKCFD 1668
Query: 1070 VGMNAYLTKPIDSERMVSTILRLTKN 1095
GM+ +++KPI + I + KN
Sbjct: 1669 AGMDDFISKPIKRAEIKEIIKKYGKN 1694
>sp|O82436|ETR1_CUCMN Ethylene receptor 1 OS=Cucumis melo var. cantalupensis GN=ETR1 PE=2
SV=1
Length = 740
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 125/255 (49%), Gaps = 22/255 (8%)
Query: 412 ARRKAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYA 471
ARR+AE + ++ FLA M+HE+RTPM AII L +L+ + +LT EQ V I KSS
Sbjct: 333 ARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQ-ETELTPEQRLMVETILKSSNL 391
Query: 472 LLRLLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPR 531
L L+N +LDLS++E G ++L+ F+L +E++++ + L L ++P
Sbjct: 392 LATLINDVLDLSRLEDGSLQLDIGTFNLHAVFKEVLNLIKPVTLVKKLSLTLHLGPDLPV 451
Query: 532 NVRGDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRT 591
GD R+ Q N++ N++KF+ G I I +T FR
Sbjct: 452 FAVGDEKRLMQAILNVVGNAVKFSKEGSISISAIVAKSET-----------------FR- 493
Query: 592 KLKQQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLG 651
+ + + D+ L +V DTG GI +F F Q R GG+GLG
Sbjct: 494 --EIRVPDFHPVPSDSHFYLRVQVKDTGSGISPQDIPKLFTKFAQTTVG-PRNSGGSGLG 550
Query: 652 LSIVRTLVNKMGGEI 666
L+I + VN M G I
Sbjct: 551 LAICKRFVNLMEGHI 565
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 1019 LILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVGMNAYLTK 1078
++ MD P +DGYE I IR+ ++ R +V LT ++ ++ CL GM+ + K
Sbjct: 658 VVFMDICTPGVDGYELAIRIREKFAKCHERPF-MVVLTGNSDKVTKESCLRAGMDGLILK 716
Query: 1079 PIDSERMVSTILRLTK 1094
P+ ++M S + L +
Sbjct: 717 PVSIDKMRSVLSELIE 732
>sp|Q54SP4|DHKD_DICDI Hybrid signal transduction histidine kinase D OS=Dictyostelium
discoideum GN=dhkD PE=2 SV=1
Length = 1546
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 133/270 (49%), Gaps = 35/270 (12%)
Query: 415 KAEASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLR 474
K + + K+QF AN+SHELRTP+A I+G + L D+ + + + +++ LL+
Sbjct: 204 KIKELDELKTQFFANVSHELRTPLALIVGPTDKLLKDENVDINVRKDLEIVARNARGLLK 263
Query: 475 LLNRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVR 534
++N +LD+S++E+GKM L + +L + + + F + +++ + ++ + P
Sbjct: 264 IVNNLLDISRLEAGKMNLNYSMVNLGQTVHLIASCFEILAREKSLDFSI-ITPSEPMMAA 322
Query: 535 GDPGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLK 594
D ++ ++ +NLI+N+ KFT SG ++ E D S N F
Sbjct: 323 IDADKMQRVITNLISNAFKFTPSGG-AVKCILEKFDLSPNKPGFQ--------------- 366
Query: 595 QQANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSI 654
V DTG GI + E +FE F Q D S+TRKHGGTGLGLSI
Sbjct: 367 ------------------IVVSDTGPGIPDNLHEIIFERFRQVDGSSTRKHGGTGLGLSI 408
Query: 655 VRTLVNKMGGEIKVVKKNSPGTLMQLYLLL 684
V+ V GG + + ++ G L L L
Sbjct: 409 VKEFVTLHGGTVTIHNISTGGAQFTLRLPL 438
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 140/306 (45%), Gaps = 41/306 (13%)
Query: 392 LTNGVSKEMKLRAELISHLDARRKA-EASNNYKSQFLANMSHELRTPMAAIIGLLEIL-- 448
L N ++ + + L+ L+ R +N K +F N+SHELRTP+ I+G ++L
Sbjct: 709 LINQLTNKKRDLQTLVGELEKERNLLNNTNKSKDEFFMNLSHELRTPLNGILGWCQLLLY 768
Query: 449 ------------KSDDQLTNEQYSTVCQIKKSSYALLRLLNRILDLSKVESGKMELENTE 496
S + + + I++ + + +L+N +LD+S + K L +
Sbjct: 769 DIDSGGSSGGGSGSISGDDSTVRTGLETIERCASSQNQLINDLLDMSLIIGDKFSLILGD 828
Query: 497 FDLQKELEE-----LVDMFSVQCSNH-NVETVLDLSDNIPRNVRGDPGRVFQIFSNLINN 550
DL +E LV S + S H N++ + +I RN+ GD R+ Q+ NL++N
Sbjct: 829 VDLPILIENAISSILVTAQSKKISVHSNIQGEGEEESSILRNIVGDKARLQQVIWNLLSN 888
Query: 551 SIKFTSS-GHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQANNAMNFREDNKL 609
SIKFT G I + N S+ F ++ N +N D
Sbjct: 889 SIKFTKEKGRIHLNLKVVNQIPSREVLGFCSN--------------PMFNTINRHGDR-- 932
Query: 610 ALCFEVDDTGCGIDQSKWETVFESFEQGDPSTTRKHGGTGLGLSIVRTLVNKMGGEIKVV 669
+ F + D G GI + +VF+ F+Q D S+TR +GG G+GLSI + +++ G V
Sbjct: 933 WILFTITDNGKGIPKQFLPSVFDRFKQADCSSTRSYGGLGIGLSITQNIIHLHKG---AV 989
Query: 670 KKNSPG 675
NS G
Sbjct: 990 YANSEG 995
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 27/141 (19%)
Query: 952 ILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQGSPSET 1011
+L+ ED P + ++L K V+ DG++ +E + R++
Sbjct: 572 VLVVEDNPEMNRFIAELLSKYYFVVTAF-DGVEGIE-----------KTRAI-------- 611
Query: 1012 PDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKKCLGVG 1071
TP DLI+ DC MP+M G E ++R S+ NIPI+ LTA A K L G
Sbjct: 612 --TP--DLIVTDCMMPRMSGDEMVEQLR---SDEQFDNIPILLLTAKADENLRIKLLQNG 664
Query: 1072 MNAYLTKPIDSERMVSTILRL 1092
++ Y+ KP SE +V+ ++ L
Sbjct: 665 VSDYVNKPFSSEELVARVVNL 685
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 20/161 (12%)
Query: 933 PCSSSNSSSNQKRILEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRM 992
P S +++ K +L G++I+L +D + +L K+GA D Q V
Sbjct: 1341 PNLRSPKANSNKNLLGGIQIMLVDDLEETTHLFSSMLYKLGAKRI---DTFQRVSDAYAF 1397
Query: 993 LAAESSRRRSLLQGSPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGA-RNIP 1051
L S P+ D+IL D MP DGY ++R E + + P
Sbjct: 1398 LCDSSK----------------PQPDIILSDLTMPFEDGYSMVRKLRDREKINTQNKKTP 1441
Query: 1052 IVALTAHAMNADEKKCLGVGMNAYLTKPIDSERMVSTILRL 1092
I+ALTA ++D++K L G + + +KP++ + ++IL L
Sbjct: 1442 IIALTASVSSSDKEKVLKSGFDLHCSKPVNFLELSNSILTL 1482
>sp|P0AEC4|ARCB_SHIFL Aerobic respiration control sensor protein ArcB OS=Shigella
flexneri GN=arcB PE=3 SV=1
Length = 778
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 53/286 (18%)
Query: 417 EASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLL 476
E ++ K+ F++ +SHELRTP+ I+GL IL D +LT EQ + I S+ L +
Sbjct: 277 ERASRDKTTFISTISHELRTPLNGIVGLSRIL-LDTELTAEQEKYLKTIHVSAVTLGNIF 335
Query: 477 NRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGD 536
N I+D+ K+E K++L+N D L +L ++ ++Q + L+ + +P V D
Sbjct: 336 NDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITD 395
Query: 537 PGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQ 596
R+ QI NLI+N++KFT G + +R
Sbjct: 396 GTRLRQILWNLISNAVKFTQQGQVTVR--------------------------------- 422
Query: 597 ANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQ------GDPSTTRKHGGTGL 650
R D L FEV+D+G GI Q + + +F + Q G P+T GTG+
Sbjct: 423 ------VRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPAT-----GTGI 471
Query: 651 GLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDA 696
GL++ R L MGG+I V + G+ L + A S ++++ DA
Sbjct: 472 GLAVSRRLAKNMGGDITVTSEQGKGS--TFTLTIHAPSVAEEVDDA 515
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 947 LEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQG 1006
L L +LL ED L IVA +LEK+G +V V G A+E
Sbjct: 523 LPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK---------------- 566
Query: 1007 SPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKK 1066
P E +DL+L+D Q+P M G + + E+ K P+VALTA+ + D+++
Sbjct: 567 -PGE------YDLVLLDIQLPDMTGLDISRELTKRYPREDLP--PLVALTANVLK-DKQE 616
Query: 1067 CLGVGMNAYLTKPIDSERMVSTILRLTKNMPSEATGTT 1104
L GM+ L+KP+ + + I + E + T
Sbjct: 617 YLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVT 654
>sp|P0AEC3|ARCB_ECOLI Aerobic respiration control sensor protein ArcB OS=Escherichia coli
(strain K12) GN=arcB PE=1 SV=1
Length = 778
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 136/286 (47%), Gaps = 53/286 (18%)
Query: 417 EASNNYKSQFLANMSHELRTPMAAIIGLLEILKSDDQLTNEQYSTVCQIKKSSYALLRLL 476
E ++ K+ F++ +SHELRTP+ I+GL IL D +LT EQ + I S+ L +
Sbjct: 277 ERASRDKTTFISTISHELRTPLNGIVGLSRIL-LDTELTAEQEKYLKTIHVSAVTLGNIF 335
Query: 477 NRILDLSKVESGKMELENTEFDLQKELEELVDMFSVQCSNHNVETVLDLSDNIPRNVRGD 536
N I+D+ K+E K++L+N D L +L ++ ++Q + L+ + +P V D
Sbjct: 336 NDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQVITD 395
Query: 537 PGRVFQIFSNLINNSIKFTSSGHIIIRGWCENLDTSKNTAEFPTDRKKFGRAFRTKLKQQ 596
R+ QI NLI+N++KFT G + +R
Sbjct: 396 GTRLRQILWNLISNAVKFTQQGQVTVR--------------------------------- 422
Query: 597 ANNAMNFREDNKLALCFEVDDTGCGIDQSKWETVFESFEQ------GDPSTTRKHGGTGL 650
R D L FEV+D+G GI Q + + +F + Q G P+T GTG+
Sbjct: 423 ------VRYDEGDMLHFEVEDSGIGIPQDELDKIFAMYYQVKDSHGGKPAT-----GTGI 471
Query: 651 GLSIVRTLVNKMGGEIKVVKKNSPGTLMQLYLLLGASSESKQIYDA 696
GL++ R L MGG+I V + G+ L + A S ++++ DA
Sbjct: 472 GLAVSRRLAKNMGGDITVTSEQGKGS--TFTLTIHAPSVAEEVDDA 515
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 26/158 (16%)
Query: 947 LEGLRILLAEDTPLIQIVACKILEKVGATVSVVPDGLQAVEALNRMLAAESSRRRSLLQG 1006
L L +LL ED L IVA +LEK+G +V V G A+E
Sbjct: 523 LPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK---------------- 566
Query: 1007 SPSETPDTPRFDLILMDCQMPKMDGYEATIEIRKSESEHGARNIPIVALTAHAMNADEKK 1066
P E +DL+L+D Q+P M G + + E+ K P+VALTA+ + D+++
Sbjct: 567 -PGE------YDLVLLDIQLPDMTGLDISRELTKRYPREDLP--PLVALTANVLK-DKQE 616
Query: 1067 CLGVGMNAYLTKPIDSERMVSTILRLTKNMPSEATGTT 1104
L GM+ L+KP+ + + I + E + T
Sbjct: 617 YLNAGMDDVLSKPLSVPALTAMIKKFWDTQDDEESTVT 654
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 391,568,754
Number of Sequences: 539616
Number of extensions: 16375882
Number of successful extensions: 46647
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 563
Number of HSP's that attempted gapping in prelim test: 45074
Number of HSP's gapped (non-prelim): 1342
length of query: 1105
length of database: 191,569,459
effective HSP length: 128
effective length of query: 977
effective length of database: 122,498,611
effective search space: 119681142947
effective search space used: 119681142947
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)