Query 001304
Match_columns 1104
No_of_seqs 442 out of 3496
Neff 8.7
Searched_HMMs 46136
Date Thu Mar 28 21:18:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001304.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001304hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0206 P-type ATPase [General 100.0 1E-181 3E-186 1641.1 64.8 1015 2-1028 14-1091(1151)
2 PLN03190 aminophospholipid tra 100.0 6E-175 1E-179 1647.4 104.6 1020 2-1030 70-1158(1178)
3 TIGR01652 ATPase-Plipid phosph 100.0 3E-161 6E-166 1545.0 100.1 1001 17-1024 1-1057(1057)
4 KOG0210 P-type ATPase [Inorgan 100.0 3E-147 6E-152 1218.7 68.6 968 2-1023 63-1050(1051)
5 COG0474 MgtA Cation transport 100.0 3E-117 6E-122 1111.6 62.9 812 12-995 52-896 (917)
6 KOG0202 Ca2+ transporting ATPa 100.0 3E-117 6E-122 1009.9 45.6 864 12-1015 31-970 (972)
7 TIGR01523 ATPase-IID_K-Na pota 100.0 3E-112 7E-117 1074.7 72.8 868 12-1014 34-1048(1053)
8 KOG0204 Calcium transporting A 100.0 1E-113 3E-118 977.7 44.8 831 12-1013 127-1008(1034)
9 TIGR01106 ATPase-IIC_X-K sodiu 100.0 4E-110 9E-115 1060.4 71.1 867 12-1014 44-986 (997)
10 TIGR01116 ATPase-IIA1_Ca sarco 100.0 3E-107 7E-112 1028.0 71.4 845 37-1011 1-916 (917)
11 TIGR01517 ATPase-IIB_Ca plasma 100.0 5E-107 1E-111 1030.4 68.6 823 12-1010 68-938 (941)
12 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1E-103 3E-108 993.7 74.0 817 12-1014 32-883 (884)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1.2E-99 3E-104 971.2 75.2 770 12-912 147-954 (1054)
14 PRK15122 magnesium-transportin 100.0 8E-100 2E-104 952.4 69.7 804 12-1008 53-892 (903)
15 PRK10517 magnesium-transportin 100.0 1.2E-99 3E-104 949.0 66.6 772 12-997 75-883 (902)
16 TIGR01524 ATPase-IIIB_Mg magne 100.0 1.2E-97 3E-102 932.7 69.1 751 12-974 41-823 (867)
17 TIGR01647 ATPase-IIIA_H plasma 100.0 3.7E-93 7.9E-98 881.5 62.3 631 12-863 9-648 (755)
18 KOG0203 Na+/K+ ATPase, alpha s 100.0 2E-94 4.3E-99 820.0 23.8 868 12-1014 66-1008(1019)
19 KOG0208 Cation transport ATPas 100.0 5.7E-83 1.2E-87 737.4 58.2 781 12-910 168-1003(1140)
20 PRK14010 potassium-transportin 100.0 7.3E-74 1.6E-78 683.9 54.3 541 39-832 28-591 (673)
21 PRK01122 potassium-transportin 100.0 1E-72 2.2E-77 674.7 53.2 528 39-815 29-578 (679)
22 TIGR01497 kdpB K+-transporting 100.0 2.9E-69 6.4E-74 643.2 55.5 545 39-830 28-594 (675)
23 KOG0209 P-type ATPase [Inorgan 100.0 1.1E-69 2.4E-74 612.7 43.6 757 16-914 175-1033(1160)
24 KOG0205 Plasma membrane H+-tra 100.0 4.2E-68 9.1E-73 586.7 26.6 599 11-815 43-655 (942)
25 TIGR01494 ATPase_P-type ATPase 100.0 2.6E-64 5.6E-69 603.9 47.5 473 72-826 6-483 (499)
26 COG2217 ZntA Cation transport 100.0 7.5E-60 1.6E-64 563.2 46.4 487 75-822 179-677 (713)
27 PRK11033 zntA zinc/cadmium/mer 100.0 4.1E-59 8.8E-64 576.0 52.0 478 76-820 212-704 (741)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 2.6E-58 5.7E-63 556.7 45.4 492 73-821 24-524 (556)
29 TIGR01512 ATPase-IB2_Cd heavy 100.0 5.8E-57 1.3E-61 541.2 47.3 470 73-821 24-503 (536)
30 KOG0207 Cation transport ATPas 100.0 3.4E-56 7.3E-61 517.0 40.4 494 81-820 352-861 (951)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 1.7E-55 3.7E-60 530.0 44.8 469 79-821 63-543 (562)
32 PRK10671 copA copper exporting 100.0 2.3E-54 4.9E-59 545.3 49.5 488 75-821 291-789 (834)
33 COG2216 KdpB High-affinity K+ 100.0 1.6E-47 3.5E-52 415.4 35.3 458 101-804 104-569 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 2.4E-28 5.2E-33 263.9 18.7 222 73-371 2-230 (230)
35 PF00702 Hydrolase: haloacid d 99.9 8.9E-22 1.9E-26 210.6 12.1 97 601-764 115-215 (215)
36 PF13246 Hydrolase_like2: Puta 99.5 2.1E-14 4.5E-19 129.3 5.5 89 435-535 1-89 (91)
37 COG4087 Soluble P-type ATPase 99.5 3.5E-13 7.6E-18 122.3 10.5 126 602-795 19-146 (152)
38 PRK10513 sugar phosphate phosp 99.2 1.8E-10 4E-15 127.7 14.9 182 601-787 11-254 (270)
39 PF00689 Cation_ATPase_C: Cati 99.2 8E-11 1.7E-15 122.2 10.1 166 837-1010 2-182 (182)
40 PRK15126 thiamin pyrimidine py 99.2 2.3E-10 5.1E-15 126.9 14.0 173 613-786 19-247 (272)
41 PRK10976 putative hydrolase; P 99.1 6.2E-10 1.3E-14 123.2 13.6 174 613-787 19-250 (266)
42 COG0561 Cof Predicted hydrolas 99.1 5.7E-10 1.2E-14 123.3 13.2 167 614-787 21-247 (264)
43 PF08282 Hydrolase_3: haloacid 99.1 1.7E-09 3.7E-14 118.4 14.4 171 612-788 14-245 (254)
44 PRK01158 phosphoglycolate phos 99.0 1.9E-09 4.1E-14 116.6 14.2 172 614-787 21-215 (230)
45 KOG4383 Uncharacterized conser 99.0 1.1E-06 2.5E-11 100.0 35.8 254 596-854 809-1131(1354)
46 TIGR01487 SPP-like sucrose-pho 99.0 3.3E-09 7.1E-14 113.3 12.5 171 613-787 18-205 (215)
47 TIGR01482 SPP-subfamily Sucros 99.0 8.4E-09 1.8E-13 111.1 14.6 168 613-787 15-207 (225)
48 PLN02887 hydrolase family prot 98.9 8.5E-09 1.8E-13 123.3 15.5 63 724-787 497-565 (580)
49 PRK10530 pyridoxal phosphate ( 98.9 1.5E-08 3.3E-13 112.5 16.2 172 613-787 20-257 (272)
50 PRK03669 mannosyl-3-phosphogly 98.9 1.9E-08 4.2E-13 111.3 13.6 170 614-787 25-254 (271)
51 TIGR00099 Cof-subfamily Cof su 98.8 3.7E-08 8E-13 108.3 15.1 173 613-787 16-246 (256)
52 TIGR01486 HAD-SF-IIB-MPGP mann 98.7 1.3E-07 2.8E-12 103.9 14.9 170 614-787 17-242 (256)
53 TIGR02137 HSK-PSP phosphoserin 98.7 6.6E-08 1.4E-12 101.4 9.8 124 613-793 68-193 (203)
54 PRK11133 serB phosphoserine ph 98.6 1.1E-07 2.4E-12 106.6 10.9 127 613-795 181-312 (322)
55 PRK00192 mannosyl-3-phosphogly 98.6 2.7E-07 6E-12 102.3 12.7 170 612-785 20-252 (273)
56 COG0560 SerB Phosphoserine pho 98.6 4.9E-07 1.1E-11 95.3 12.8 122 612-787 76-201 (212)
57 TIGR01485 SPP_plant-cyano sucr 98.5 8.4E-07 1.8E-11 97.0 13.6 169 612-781 20-220 (249)
58 TIGR02726 phenyl_P_delta pheny 98.5 4.5E-07 9.8E-12 91.7 9.8 99 620-786 41-139 (169)
59 PLN02382 probable sucrose-phos 98.5 1.3E-06 2.7E-11 101.8 13.1 163 618-781 33-231 (413)
60 TIGR02471 sucr_syn_bact_C sucr 98.5 1.5E-06 3.2E-11 94.3 12.9 162 620-786 22-220 (236)
61 PRK14502 bifunctional mannosyl 98.4 3.7E-06 8E-11 100.4 15.6 158 614-774 434-661 (694)
62 TIGR01670 YrbI-phosphatas 3-de 98.4 1.4E-06 3E-11 87.5 9.8 95 621-787 36-134 (154)
63 TIGR00338 serB phosphoserine p 98.4 1.4E-06 3E-11 93.4 10.3 124 613-791 85-213 (219)
64 TIGR02461 osmo_MPG_phos mannos 98.4 5E-06 1.1E-10 89.0 14.4 43 611-653 13-55 (225)
65 TIGR02463 MPGP_rel mannosyl-3- 98.3 6.5E-06 1.4E-10 88.4 14.2 147 616-769 19-220 (221)
66 PRK10187 trehalose-6-phosphate 98.3 5.2E-06 1.1E-10 91.2 13.1 172 613-790 36-235 (266)
67 PRK09484 3-deoxy-D-manno-octul 98.3 3E-06 6.5E-11 87.7 9.8 95 620-786 55-153 (183)
68 KOG1615 Phosphoserine phosphat 98.3 1.6E-06 3.5E-11 85.3 6.8 129 613-789 88-219 (227)
69 PTZ00174 phosphomannomutase; P 98.3 5.4E-06 1.2E-10 90.4 11.6 59 724-783 178-243 (247)
70 PRK13582 thrH phosphoserine ph 98.1 2.1E-05 4.7E-10 83.2 12.6 124 613-793 68-193 (205)
71 PRK12702 mannosyl-3-phosphogly 98.1 6.2E-05 1.3E-09 81.3 14.9 43 612-654 17-59 (302)
72 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.1 1.6E-05 3.4E-10 83.9 10.2 117 613-782 80-200 (201)
73 TIGR01484 HAD-SF-IIB HAD-super 98.1 8.9E-06 1.9E-10 86.1 7.9 157 613-769 17-204 (204)
74 PF12710 HAD: haloacid dehalog 97.9 1.9E-05 4.2E-10 82.5 7.3 92 616-761 92-192 (192)
75 COG1778 Low specificity phosph 97.9 2.2E-05 4.7E-10 75.1 6.3 96 620-787 42-141 (170)
76 PLN02954 phosphoserine phospha 97.9 6.3E-05 1.4E-09 80.9 10.9 133 613-793 84-221 (224)
77 TIGR03333 salvage_mtnX 2-hydro 97.9 6.2E-05 1.4E-09 80.2 10.7 137 612-795 69-208 (214)
78 PRK14501 putative bifunctional 97.8 0.00027 6E-09 89.2 17.1 173 614-791 515-716 (726)
79 PRK08238 hypothetical protein; 97.8 0.0019 4.2E-08 76.5 22.7 93 613-770 72-165 (479)
80 TIGR01489 DKMTPPase-SF 2,3-dik 97.7 0.00017 3.7E-09 75.0 9.4 114 612-768 71-186 (188)
81 PRK09552 mtnX 2-hydroxy-3-keto 97.7 0.00017 3.7E-09 77.2 9.4 134 613-794 74-211 (219)
82 TIGR01488 HAD-SF-IB Haloacid D 97.6 0.00016 3.6E-09 74.4 8.2 100 614-763 74-177 (177)
83 TIGR01490 HAD-SF-IB-hyp1 HAD-s 97.6 0.0002 4.4E-09 75.5 8.5 108 611-770 85-197 (202)
84 COG0546 Gph Predicted phosphat 97.6 0.00039 8.5E-09 74.4 10.5 119 611-794 87-216 (220)
85 cd01427 HAD_like Haloacid deha 97.5 0.00026 5.7E-09 68.9 8.1 117 610-768 21-138 (139)
86 PF05116 S6PP: Sucrose-6F-phos 97.5 0.00042 9.2E-09 75.3 9.8 154 622-776 28-212 (247)
87 PLN02423 phosphomannomutase 97.5 0.00094 2E-08 72.6 12.1 50 724-774 179-235 (245)
88 TIGR01454 AHBA_synth_RP 3-amin 97.4 0.00047 1E-08 73.0 9.2 123 613-793 75-201 (205)
89 PRK13222 phosphoglycolate phos 97.4 0.00061 1.3E-08 73.3 9.7 123 612-794 92-220 (226)
90 TIGR00685 T6PP trehalose-phosp 97.3 0.0017 3.7E-08 70.6 12.2 176 614-794 26-238 (244)
91 PRK13223 phosphoglycolate phos 97.3 0.00091 2E-08 74.0 9.9 119 612-794 100-228 (272)
92 TIGR01449 PGP_bact 2-phosphogl 97.3 0.00077 1.7E-08 71.7 8.8 115 613-792 85-210 (213)
93 PLN02580 trehalose-phosphatase 97.3 0.0053 1.2E-07 69.9 15.2 177 614-794 142-372 (384)
94 PRK13288 pyrophosphatase PpaX; 97.1 0.0017 3.7E-08 69.2 8.8 124 613-794 82-209 (214)
95 PRK10826 2-deoxyglucose-6-phos 97.0 0.0017 3.8E-08 69.6 8.2 116 612-792 91-216 (222)
96 PRK13226 phosphoglycolate phos 97.0 0.0026 5.7E-08 68.5 9.0 124 613-794 95-223 (229)
97 PLN03243 haloacid dehalogenase 97.0 0.0034 7.3E-08 68.8 9.9 124 613-794 109-233 (260)
98 PRK13225 phosphoglycolate phos 96.9 0.0048 1E-07 68.1 10.5 118 613-794 142-266 (273)
99 smart00831 Cation_ATPase_N Cat 96.9 0.00078 1.7E-08 56.4 3.0 44 12-59 18-62 (64)
100 TIGR01545 YfhB_g-proteo haloac 96.8 0.0078 1.7E-07 63.7 10.5 106 613-770 94-201 (210)
101 PRK11587 putative phosphatase; 96.7 0.0062 1.3E-07 65.1 9.1 118 613-791 83-203 (218)
102 TIGR01422 phosphonatase phosph 96.7 0.0083 1.8E-07 65.8 10.0 42 613-654 99-140 (253)
103 PLN02575 haloacid dehalogenase 96.6 0.0096 2.1E-07 68.0 10.3 122 613-794 216-340 (381)
104 PRK13478 phosphonoacetaldehyde 96.6 0.015 3.3E-07 64.2 11.7 41 613-653 101-141 (267)
105 PLN02205 alpha,alpha-trehalose 96.5 0.042 9.1E-07 69.9 16.1 187 601-794 604-840 (854)
106 PRK11590 hypothetical protein; 96.5 0.017 3.8E-07 61.3 11.0 106 613-770 95-202 (211)
107 PF00690 Cation_ATPase_N: Cati 96.5 0.0011 2.3E-08 56.5 1.3 41 12-56 28-69 (69)
108 TIGR03351 PhnX-like phosphonat 96.5 0.0088 1.9E-07 64.0 8.7 42 612-653 86-127 (220)
109 smart00775 LNS2 LNS2 domain. T 96.5 0.021 4.7E-07 57.3 10.8 105 611-766 25-141 (157)
110 PLN03017 trehalose-phosphatase 96.3 0.1 2.2E-06 59.1 16.0 191 600-794 118-354 (366)
111 TIGR01672 AphA HAD superfamily 96.3 0.0078 1.7E-07 64.5 6.7 40 614-653 115-158 (237)
112 PLN02770 haloacid dehalogenase 96.2 0.022 4.7E-07 62.2 9.9 115 613-791 108-231 (248)
113 TIGR01544 HAD-SF-IE haloacid d 96.1 0.047 1E-06 59.5 11.6 44 613-656 121-164 (277)
114 TIGR01548 HAD-SF-IA-hyp1 haloa 96.1 0.014 3.1E-07 61.2 7.4 43 611-653 104-146 (197)
115 PRK11009 aphA acid phosphatase 96.0 0.016 3.4E-07 62.1 7.4 40 613-652 114-157 (237)
116 PRK06698 bifunctional 5'-methy 96.0 0.025 5.3E-07 67.8 9.8 120 613-794 330-452 (459)
117 TIGR02253 CTE7 HAD superfamily 96.0 0.023 5E-07 60.7 8.6 40 613-652 94-133 (221)
118 COG4030 Uncharacterized protei 95.9 0.074 1.6E-06 54.3 10.9 148 613-789 83-253 (315)
119 PRK06769 hypothetical protein; 95.8 0.044 9.5E-07 56.1 9.3 41 600-640 11-55 (173)
120 PLN02811 hydrolase 95.5 0.039 8.5E-07 59.0 8.1 31 613-643 78-108 (220)
121 TIGR01428 HAD_type_II 2-haloal 95.5 0.045 9.8E-07 57.4 8.3 40 613-652 92-131 (198)
122 PHA02530 pseT polynucleotide k 95.5 0.037 8.1E-07 62.3 8.2 107 610-767 184-292 (300)
123 PRK14988 GMP/IMP nucleotidase; 95.5 0.045 9.8E-07 58.7 8.3 40 613-652 93-132 (224)
124 COG4359 Uncharacterized conser 95.4 0.061 1.3E-06 53.3 7.8 109 613-768 73-183 (220)
125 TIGR01685 MDP-1 magnesium-depe 95.3 0.11 2.3E-06 53.1 10.0 53 601-653 33-86 (174)
126 PLN02940 riboflavin kinase 95.3 0.045 9.8E-07 63.6 8.3 40 613-652 93-133 (382)
127 PF13419 HAD_2: Haloacid dehal 95.3 0.035 7.5E-07 56.5 6.6 43 611-653 75-117 (176)
128 PRK08942 D,D-heptose 1,7-bisph 95.3 0.11 2.3E-06 53.7 10.2 52 743-794 119-175 (181)
129 PRK09449 dUMP phosphatase; Pro 95.3 0.07 1.5E-06 57.2 9.1 39 613-652 95-133 (224)
130 PLN02779 haloacid dehalogenase 95.2 0.083 1.8E-06 58.9 9.7 38 613-650 144-181 (286)
131 TIGR01662 HAD-SF-IIIA HAD-supe 95.2 0.086 1.9E-06 51.2 8.7 40 613-652 25-72 (132)
132 TIGR02009 PGMB-YQAB-SF beta-ph 94.9 0.052 1.1E-06 56.1 6.5 39 612-652 87-125 (185)
133 TIGR01990 bPGM beta-phosphoglu 94.7 0.048 1E-06 56.4 5.7 38 613-652 87-124 (185)
134 PLN02151 trehalose-phosphatase 94.6 0.24 5.2E-06 56.0 11.1 177 614-794 121-340 (354)
135 TIGR01509 HAD-SF-IA-v3 haloaci 94.5 0.11 2.5E-06 53.4 7.7 39 613-652 85-123 (183)
136 TIGR02254 YjjG/YfnB HAD superf 94.4 0.12 2.6E-06 55.2 8.1 40 613-653 97-136 (224)
137 smart00577 CPDc catalytic doma 94.2 0.052 1.1E-06 54.0 4.4 40 612-652 44-83 (148)
138 TIGR01533 lipo_e_P4 5'-nucleot 93.9 0.3 6.4E-06 53.3 9.6 43 611-653 116-161 (266)
139 COG3769 Predicted hydrolase (H 93.7 0.77 1.7E-05 47.2 11.4 38 616-653 26-63 (274)
140 TIGR01457 HAD-SF-IIA-hyp2 HAD- 93.6 2.2 4.8E-05 46.5 16.1 50 606-655 10-62 (249)
141 TIGR01668 YqeG_hyp_ppase HAD s 93.6 0.21 4.6E-06 50.9 7.5 40 613-652 43-83 (170)
142 PF06888 Put_Phosphatase: Puta 93.3 1.6 3.5E-05 46.7 13.8 42 613-654 71-114 (234)
143 TIGR02252 DREG-2 REG-2-like, H 93.3 0.21 4.5E-06 52.6 7.3 39 613-652 105-143 (203)
144 TIGR01656 Histidinol-ppas hist 93.2 0.29 6.3E-06 48.6 7.7 27 613-639 27-53 (147)
145 TIGR01681 HAD-SF-IIIC HAD-supe 92.9 0.23 5.1E-06 48.0 6.3 39 613-651 29-68 (128)
146 TIGR01549 HAD-SF-IA-v1 haloaci 92.6 0.29 6.3E-06 48.8 6.7 40 611-650 62-101 (154)
147 TIGR00213 GmhB_yaeD D,D-heptos 92.5 0.55 1.2E-05 48.2 8.8 48 744-791 123-174 (176)
148 TIGR01261 hisB_Nterm histidino 92.3 0.19 4.1E-06 50.7 4.9 26 613-638 29-54 (161)
149 PLN02919 haloacid dehalogenase 92.1 0.59 1.3E-05 61.6 10.3 135 613-806 161-301 (1057)
150 PRK10563 6-phosphogluconate ph 91.7 0.27 5.8E-06 52.5 5.6 39 612-653 87-125 (221)
151 PRK10444 UMP phosphatase; Prov 91.3 3.5 7.5E-05 44.9 13.8 47 606-652 10-59 (248)
152 TIGR01691 enolase-ppase 2,3-di 90.9 0.86 1.9E-05 48.5 8.3 40 611-650 93-132 (220)
153 TIGR01675 plant-AP plant acid 90.2 1.1 2.4E-05 47.5 8.3 40 613-652 120-162 (229)
154 TIGR01664 DNA-3'-Pase DNA 3'-p 89.8 1.2 2.7E-05 45.1 8.1 27 614-640 43-69 (166)
155 TIGR02247 HAD-1A3-hyp Epoxide 89.3 0.44 9.5E-06 50.5 4.6 28 613-640 94-121 (211)
156 KOG3120 Predicted haloacid deh 88.9 2.6 5.7E-05 43.5 9.3 40 613-652 84-124 (256)
157 PF02358 Trehalose_PPase: Treh 88.8 1.2 2.6E-05 48.1 7.6 175 613-787 19-233 (235)
158 PRK05446 imidazole glycerol-ph 88.5 1.3 2.8E-05 50.5 7.8 26 613-638 30-55 (354)
159 TIGR01686 FkbH FkbH-like domai 88.4 0.99 2.1E-05 51.2 6.9 37 613-649 31-67 (320)
160 TIGR01459 HAD-SF-IIA-hyp4 HAD- 87.9 1.3 2.8E-05 48.1 7.2 48 606-653 17-66 (242)
161 COG0241 HisB Histidinol phosph 87.9 3.1 6.7E-05 42.5 9.2 104 614-769 32-146 (181)
162 PRK09456 ?-D-glucose-1-phospha 87.2 0.87 1.9E-05 47.7 5.2 30 613-642 84-113 (199)
163 COG1877 OtsB Trehalose-6-phosp 87.0 7 0.00015 42.6 11.9 156 609-764 36-218 (266)
164 PHA02597 30.2 hypothetical pro 86.2 2.5 5.5E-05 44.1 8.1 23 745-767 146-170 (197)
165 COG2179 Predicted hydrolase of 85.3 2.3 5E-05 42.1 6.4 40 613-652 46-85 (175)
166 PLN02645 phosphoglycolate phos 85.0 2.8 6.1E-05 47.3 8.2 47 606-652 37-86 (311)
167 PF09419 PGP_phosphatase: Mito 82.6 4.6 9.9E-05 40.8 7.5 42 611-652 57-107 (168)
168 PLN02177 glycerol-3-phosphate 81.8 10 0.00022 45.6 11.3 71 729-807 173-243 (497)
169 PRK10725 fructose-1-P/6-phosph 80.6 3.7 8.1E-05 42.3 6.5 35 618-653 92-126 (188)
170 KOG0210 P-type ATPase [Inorgan 80.2 10 0.00023 45.6 10.2 168 20-192 85-269 (1051)
171 COG0647 NagD Predicted sugar p 79.7 18 0.00039 39.7 11.4 45 605-649 16-60 (269)
172 PF13344 Hydrolase_6: Haloacid 76.8 1.7 3.7E-05 40.0 2.2 48 606-653 7-57 (101)
173 TIGR01684 viral_ppase viral ph 75.7 4 8.6E-05 44.8 5.0 41 614-654 146-187 (301)
174 TIGR01993 Pyr-5-nucltdase pyri 74.8 5.3 0.00011 41.1 5.6 38 613-653 84-121 (184)
175 TIGR01458 HAD-SF-IIA-hyp3 HAD- 74.0 4.8 0.0001 44.1 5.2 48 606-653 10-64 (257)
176 PF03767 Acid_phosphat_B: HAD 70.8 6.6 0.00014 42.1 5.2 30 612-641 114-143 (229)
177 PF08235 LNS2: LNS2 (Lipin/Ned 70.3 38 0.00082 33.8 9.9 33 612-644 26-58 (157)
178 PHA03398 viral phosphatase sup 70.2 6.7 0.00014 43.1 5.1 41 614-654 148-189 (303)
179 COG0637 Predicted phosphatase/ 69.3 14 0.0003 39.4 7.4 44 612-655 85-128 (221)
180 TIGR01689 EcbF-BcbF capsule bi 67.8 4.7 0.0001 38.7 3.0 33 612-644 23-55 (126)
181 PLN03063 alpha,alpha-trehalose 67.0 1.2E+02 0.0026 39.0 16.2 151 614-764 533-721 (797)
182 TIGR01680 Veg_Stor_Prot vegeta 66.5 21 0.00045 39.0 7.8 30 612-641 144-173 (275)
183 TIGR02251 HIF-SF_euk Dullard-l 63.2 5.2 0.00011 40.4 2.4 42 610-652 39-80 (162)
184 TIGR01663 PNK-3'Pase polynucle 62.9 22 0.00048 42.9 8.0 27 614-640 198-224 (526)
185 PRK10748 flavin mononucleotide 61.9 16 0.00035 39.4 6.2 28 613-641 113-140 (238)
186 COG0474 MgtA Cation transport 58.9 61 0.0013 42.5 11.6 98 35-144 68-170 (917)
187 PLN03064 alpha,alpha-trehalose 57.5 1.5E+02 0.0032 38.7 14.3 153 614-766 623-813 (934)
188 COG1011 Predicted hydrolase (H 56.8 47 0.001 35.2 8.7 40 613-653 99-138 (229)
189 TIGR02468 sucrsPsyn_pln sucros 55.0 1.2E+02 0.0026 39.8 13.0 47 725-771 947-1002(1050)
190 TIGR01493 HAD-SF-IA-v2 Haloaci 54.1 24 0.00053 35.7 5.7 33 613-652 90-122 (175)
191 KOG3040 Predicted sugar phosph 52.1 28 0.00061 35.9 5.4 51 602-652 12-65 (262)
192 PF13242 Hydrolase_like: HAD-h 51.9 26 0.00056 30.0 4.6 47 743-789 20-73 (75)
193 TIGR01458 HAD-SF-IIA-hyp3 HAD- 49.5 32 0.00068 37.7 5.9 53 743-795 195-254 (257)
194 TIGR01522 ATPase-IIA2_Ca golgi 49.3 1E+02 0.0022 40.3 11.5 109 35-158 48-158 (884)
195 TIGR01452 PGP_euk phosphoglyco 45.0 23 0.0005 39.3 4.0 48 606-653 11-61 (279)
196 TIGR01501 MthylAspMutase methy 43.6 1.6E+02 0.0035 28.6 9.0 80 549-652 24-111 (134)
197 COG3700 AphA Acid phosphatase 42.2 41 0.00088 33.7 4.6 38 615-652 116-157 (237)
198 TIGR01517 ATPase-IIB_Ca plasma 41.0 67 0.0015 42.3 8.0 62 68-129 133-207 (941)
199 PTZ00445 p36-lilke protein; Pr 39.3 42 0.00091 35.1 4.5 29 614-642 76-104 (219)
200 PRK02261 methylaspartate mutas 38.7 2.7E+02 0.0058 27.2 9.9 81 548-652 25-113 (137)
201 PRK11507 ribosome-associated p 36.9 36 0.00077 28.9 2.9 26 104-129 38-63 (70)
202 PRK14194 bifunctional 5,10-met 36.8 3E+02 0.0065 30.8 11.0 177 611-801 13-226 (301)
203 TIGR01647 ATPase-IIIA_H plasma 36.7 3.2E+02 0.007 35.1 12.9 96 36-143 25-121 (755)
204 PF03332 PMM: Eukaryotic phosp 36.6 14 0.0003 38.8 0.6 67 708-774 134-210 (220)
205 cd02071 MM_CoA_mut_B12_BD meth 36.4 84 0.0018 29.9 5.9 81 548-652 21-103 (122)
206 COG0761 lytB 4-Hydroxy-3-methy 36.1 3.7E+02 0.0081 29.6 11.1 40 524-563 75-123 (294)
207 PF13275 S4_2: S4 domain; PDB: 35.8 19 0.00042 30.0 1.2 26 105-131 35-60 (65)
208 cd02067 B12-binding B12 bindin 35.6 1E+02 0.0022 29.0 6.3 81 548-652 21-103 (119)
209 PF12689 Acid_PPase: Acid Phos 32.5 71 0.0015 32.4 4.8 41 613-653 45-86 (169)
210 PRK08508 biotin synthase; Prov 32.3 5.5E+02 0.012 28.3 12.4 116 540-679 42-175 (279)
211 PF13380 CoA_binding_2: CoA bi 32.1 67 0.0014 30.3 4.4 39 614-652 64-103 (116)
212 COG2503 Predicted secreted aci 31.9 2.1E+02 0.0046 30.6 8.1 39 614-652 123-165 (274)
213 TIGR01460 HAD-SF-IIA Haloacid 29.6 86 0.0019 33.7 5.3 47 606-652 7-57 (236)
214 PF01455 HupF_HypC: HupF/HypC 29.5 1.1E+02 0.0024 25.8 4.7 32 100-131 16-50 (68)
215 PF12710 HAD: haloacid dehalog 28.4 28 0.00062 35.6 1.3 14 378-391 1-14 (192)
216 COG1188 Ribosome-associated he 27.3 65 0.0014 29.3 3.1 33 98-133 31-63 (100)
217 PF03120 DNA_ligase_OB: NAD-de 27.3 39 0.00084 29.7 1.6 27 114-140 45-72 (82)
218 PF14336 DUF4392: Domain of un 27.1 1.1E+02 0.0024 34.0 5.7 37 616-652 63-100 (291)
219 cd05013 SIS_RpiR RpiR-like pro 26.9 4.6E+02 0.01 24.6 9.6 27 616-642 74-100 (139)
220 TIGR00640 acid_CoA_mut_C methy 26.2 4.9E+02 0.011 25.2 9.3 81 548-652 24-106 (132)
221 PF05822 UMPH-1: Pyrimidine 5' 25.3 2.1E+02 0.0045 31.0 7.0 45 613-657 90-134 (246)
222 PF15584 Imm44: Immunity prote 24.1 35 0.00075 30.3 0.8 20 121-140 13-32 (94)
223 COG1856 Uncharacterized homolo 23.3 6.7E+02 0.015 26.6 9.8 100 520-640 22-123 (275)
224 PRK14170 bifunctional 5,10-met 23.2 9E+02 0.019 26.8 11.6 180 612-803 12-226 (284)
225 smart00831 Cation_ATPase_N Cat 23.1 1.9E+02 0.0042 23.6 5.2 40 246-285 22-61 (64)
226 PRK14584 hmsS hemin storage sy 23.1 4.6E+02 0.01 26.1 8.3 14 122-135 132-145 (153)
227 TIGR01456 CECR5 HAD-superfamil 23.1 2.8E+02 0.006 31.4 8.1 47 606-652 9-63 (321)
228 COG2875 CobM Precorrin-4 methy 23.0 7.4E+02 0.016 26.5 10.1 128 618-755 92-232 (254)
229 TIGR02250 FCP1_euk FCP1-like p 22.6 1.3E+02 0.0027 30.1 4.6 43 610-653 55-97 (156)
230 PRK14179 bifunctional 5,10-met 22.5 5.7E+02 0.012 28.4 10.0 179 612-804 12-228 (284)
231 PF12791 RsgI_N: Anti-sigma fa 22.2 1.3E+02 0.0029 24.0 3.8 37 99-135 4-42 (56)
232 PRK14169 bifunctional 5,10-met 21.2 8.8E+02 0.019 26.9 11.1 178 612-803 11-225 (282)
233 PRK10053 hypothetical protein; 21.2 62 0.0013 31.2 1.9 26 362-387 64-89 (130)
234 cd02072 Glm_B12_BD B12 binding 20.6 4.2E+02 0.0091 25.5 7.4 80 549-652 22-109 (128)
235 PLN02897 tetrahydrofolate dehy 20.5 1.1E+03 0.023 27.0 11.7 184 610-803 64-283 (345)
236 COG5012 Predicted cobalamin bi 20.4 1E+02 0.0022 32.5 3.4 82 548-653 126-208 (227)
237 TIGR01459 HAD-SF-IIA-hyp4 HAD- 20.1 92 0.002 33.6 3.3 23 745-767 214-237 (242)
238 TIGR02244 HAD-IG-Ncltidse HAD 20.0 1.4E+02 0.003 34.1 4.7 37 615-651 186-223 (343)
No 1
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1.3e-181 Score=1641.14 Aligned_cols=1015 Identities=40% Similarity=0.705 Sum_probs=909.9
Q ss_pred ccEEEeCCCc---ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHH
Q 001304 2 KRYIYINDDE---TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFA 78 (1104)
Q Consensus 2 ~r~i~~n~~~---~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~ 78 (1104)
+|.+|.|++. .+..+|+.|+|+|+|||+++|||++|||||+|++|+|||++++++++| ++|.+++++++|+++|+.
T Consensus 14 ~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~~vl~ 92 (1151)
T KOG0206|consen 14 SRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLLFVLG 92 (1151)
T ss_pred ceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeeceeeeeh
Confidence 6999999973 345699999999999999999999999999999999999999999999 889999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHhhcceEEEEEECCe-EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCC
Q 001304 79 VSATKEAWDDYNRYLSDKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALD 157 (1104)
Q Consensus 79 i~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~-~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~Lt 157 (1104)
++++|+++||++|+++|+++|+++++|++++. +++..|++|+|||+|++..+|.+|||.+||+|++++|.|||+|++||
T Consensus 93 ~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLD 172 (1151)
T KOG0206|consen 93 ITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLD 172 (1151)
T ss_pred HHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecC
Confidence 99999999999999999999999999999644 89999999999999999999999999999999999999999999999
Q ss_pred CCCCceEeeccccccCC-CHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEE
Q 001304 158 GETDLKTRLIPAACMGM-DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (1104)
Q Consensus 158 GEs~~~~K~~~~~~~~~-~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~g 236 (1104)
||+++|.|++...+... +.+.+.++++.++||.|+.++|.|+|++.+.+ ...|++.+|+++|||.++||+|++|
T Consensus 173 GEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~-----~~~pl~~~~~Llrg~~lrNT~~v~G 247 (1151)
T KOG0206|consen 173 GETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQG-----QIYPLSPDNLLLRGSRLRNTEWVYG 247 (1151)
T ss_pred CccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeecc-----CCCCCcHHHcccCCceeccCcEEEE
Confidence 99999999997666554 34458889999999999999999999998532 2229999999999999999999999
Q ss_pred EEEEecCccccccccCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc---cceeeccCCCcchhhhh
Q 001304 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEAR---KQWYVLYPQEFPWYELL 313 (1104)
Q Consensus 237 vVv~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 313 (1104)
+|++||++||+|+|...++.|++++++.+|+.+..+++++++++++..+...+|...+.. ..||+.... +....+
T Consensus 248 ~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 325 (1151)
T KOG0206|consen 248 VVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE--AAYAGF 325 (1151)
T ss_pred EEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch--HHHHHH
Confidence 999999999999999999999999999999999999999999999888877677653322 345654322 344566
Q ss_pred hhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEE
Q 001304 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (1104)
Q Consensus 314 ~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 393 (1104)
..+++++++++.+||+||+|++++.+..|+.||+||.+||+++++.|+.+|++++.|+||||+||++|||||||+|.|+|
T Consensus 326 ~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F 405 (1151)
T KOG0206|consen 326 VHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEF 405 (1151)
T ss_pred HHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeee
Confidence 77788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecEEecCCCCc---------------------CCCchhhhhhhcc---CCchHHHHHHHHhhhcccccccCCCC-
Q 001304 394 RRCCIGGIFYGNETGD---------------------ALKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAKSKAG- 448 (1104)
Q Consensus 394 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~---~~~~~~~~~~~lalc~~~~~~~~~~~- 448 (1104)
++|+++|..|+....+ ...++.+.+.... ..+...+|++++|+||++.++.++++
T Consensus 406 ~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~ 485 (1151)
T KOG0206|consen 406 KKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSG 485 (1151)
T ss_pred ecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCcc
Confidence 9999999999865322 1112222222222 34567799999999999999985444
Q ss_pred ceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHH
Q 001304 449 AILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE 528 (1104)
Q Consensus 449 ~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e 528 (1104)
.+.|+++||||.||+++|+++|+.+..|+++.+.+...+..++|++|+++||+|.|||||||||.| +|++.+||||||+
T Consensus 486 ~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p-~g~i~LycKGADs 564 (1151)
T KOG0206|consen 486 KLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDP-DGRILLYCKGADS 564 (1151)
T ss_pred ceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcC-CCcEEEEEcCcch
Confidence 899999999999999999999999999999999999877788999999999999999999999998 6899999999999
Q ss_pred hhhhhhccCCc--hhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEE
Q 001304 529 AILPYAHAGQQ--TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606 (1104)
Q Consensus 529 ~i~~~~~~~~~--~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG 606 (1104)
+|++++..++. .+...+|+++||.+||||||+|||+++++||++|.++|.+|+.+++||++.++++++.+|+||+++|
T Consensus 565 vI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 565 VIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred hhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 99999986432 4678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH------HHHH---HHHH
Q 001304 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------DEVC---RSLE 677 (1104)
Q Consensus 607 ~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~------~~~~---~~~~ 677 (1104)
.+||||+||+||||+|+.|++||||+||+|||+.|||++||.+|+++.++++ .+.++..+. +... +.+.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~--~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMK--LIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCce--EEEEecCChhhhcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987 555554332 1111 1111
Q ss_pred ----HHHHHccccCCCCCceEEEEcchhHHHHHHH-HHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cCCeEEEEc
Q 001304 678 ----RVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIG 751 (1104)
Q Consensus 678 ----~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~-~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~~~v~~iG 751 (1104)
+........... +..++|+||+++.++++. .+..|.+++..|++++|||++|.||+.+|+.+++ .+.+++|||
T Consensus 723 ~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIG 801 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIG 801 (1151)
T ss_pred HhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEee
Confidence 111111111112 479999999999999986 6679999999999999999999999999999985 688999999
Q ss_pred CCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhh
Q 001304 752 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831 (1104)
Q Consensus 752 DG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~ 831 (1104)
||+||++|+|+||||||++|.||.||+++|||.+.+|++|.+|+|+||||+|.|+++++.|+||||+.+++++|||++++
T Consensus 802 DGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~ 881 (1151)
T KOG0206|consen 802 DGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFN 881 (1151)
T ss_pred CCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhhh-hhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhh
Q 001304 832 GLSGTSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISI 910 (1104)
Q Consensus 832 ~~~g~~~~~~~~ll~~nl~~~~lp~~-~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 910 (1104)
+|+|+++|++|++.+||++||++|++ +++||+|++++.+|++|++|+.++++..++++.|+.|++.|+||++++|++++
T Consensus 882 gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~ 961 (1151)
T KOG0206|consen 882 GFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPY 961 (1151)
T ss_pred CCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeH
Confidence 99999999999999999999999999 78999999999999999999999999999999999999999999999999998
Q ss_pred heeecc-------cccceeeeehhhhHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHHhh-cC----CchhHH
Q 001304 911 HVYAYE-------KSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSA-IP----SSGMYT 978 (1104)
Q Consensus 911 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~-vp----~~~~~~ 978 (1104)
..+... ..+..++++..++..++.+.+.+.+++++|+|++++.+|+|++++|++.+++.. .| ..++++
T Consensus 962 ~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~ 1041 (1151)
T KOG0206|consen 962 LVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYG 1041 (1151)
T ss_pred hhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHH
Confidence 887531 123456666677777777777788999999999999999999999999888864 22 245778
Q ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHh
Q 001304 979 IMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERM 1028 (1104)
Q Consensus 979 ~~~~~~~~~~~w~~ill~~~~~llp~~i~k~~~~~~~p~~~~~~~e~~~~ 1028 (1104)
.+.+++++|.||+++++++++|++|++++|.+++.++|++.+++|+.++.
T Consensus 1042 ~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~ 1091 (1151)
T KOG0206|consen 1042 VAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKY 1091 (1151)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhc
Confidence 88899999999999999999999999999999999999999999999863
No 2
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=5.8e-175 Score=1647.39 Aligned_cols=1020 Identities=34% Similarity=0.585 Sum_probs=897.3
Q ss_pred ccEEEeCCCcc--cccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHH
Q 001304 2 KRYIYINDDET--SQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAV 79 (1104)
Q Consensus 2 ~r~i~~n~~~~--~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i 79 (1104)
.|.||+|+++. .+.+|++|+++|+|||+|+|||++||+||++++|+|||+++++|++|.+++.++.++++||++++++
T Consensus 70 ~r~i~~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v 149 (1178)
T PLN03190 70 ARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLV 149 (1178)
T ss_pred ceEEEcCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHH
Confidence 59999999742 2347999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCC
Q 001304 80 SATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1104)
Q Consensus 80 ~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGE 159 (1104)
+++++++||++|+++|++.|+++++|+|+|++++++|++|+|||||+|++||.||||++||+|++++|.|+|||++||||
T Consensus 150 ~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGE 229 (1178)
T PLN03190 150 TAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGE 229 (1178)
T ss_pred HHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
|+||.|.+...+... ..+..++++.++||.||+++|+|+|++++. ++..|++.+|+++|||.++||+|++|+|+
T Consensus 230 t~~k~k~~~~~~~~~-~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~-----~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 230 SNLKTRYAKQETLSK-IPEKEKINGLIKCEKPNRNIYGFQANMEVD-----GKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred eeeeEecccchhhhc-chhhhhceEEEEEeCCCccceeEEEEEEEC-----CCcccCCccceeeccceecCCceEEEEEE
Confidence 999999876544321 223456789999999999999999999873 45568899999999999999999999999
Q ss_pred EecCccccccccCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCC----------cc-
Q 001304 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE----------FP- 308 (1104)
Q Consensus 240 ~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----------~~- 308 (1104)
|||+|||+++|...++.|.|++|+.+|+++.+++++++++|+++++++..|........||+..... .+
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999888887766665433334444422100 00
Q ss_pred --h-hhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCC
Q 001304 309 --W-YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (1104)
Q Consensus 309 --~-~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 385 (1104)
+ ...+..+++++++++.+||+||+|+++++|..|+++|+||.+|+++..+.++.+|+++++|+||+|+|||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 1 1234556667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEEEEecEEecCCCCcC----------------------CCchhhhhhhcc-----CCchHHHHHHHHhhhc
Q 001304 386 LTENRMIFRRCCIGGIFYGNETGDA----------------------LKDVGLLNAITS-----GSPDVIRFLTVMAVCN 438 (1104)
Q Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~-----~~~~~~~~~~~lalc~ 438 (1104)
||+|+|+|++|+++|..|+.+.... ..++.+.+.... ..+.+.+|+.++|+||
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCh 543 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcC
Confidence 9999999999999999997431100 001111111110 1123568999999999
Q ss_pred ccccccCC---C---CceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEE
Q 001304 439 TVIPAKSK---A---GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVK 512 (1104)
Q Consensus 439 ~~~~~~~~---~---~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 512 (1104)
++.+...+ + +.+.|+++||||.||+++|+++|+.+..|+++.+.++..+...+|++++++||+|+||||||+++
T Consensus 544 tv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~ 623 (1178)
T PLN03190 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILG 623 (1178)
T ss_pred CceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEE
Confidence 99885321 2 24679999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCcEEEEecChHHhhhhhhccC---CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHH
Q 001304 513 DCHSGNISLLSKGADEAILPYAHAG---QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589 (1104)
Q Consensus 513 ~~~~~~~~l~~KGa~e~i~~~~~~~---~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~ 589 (1104)
++ ++++++|+|||||+|+++|... ...+++.+++++||++|+||||+|||+++++|+++|.++|++|..++.+|++
T Consensus 624 ~~-~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 624 CP-DKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred cC-CCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 86 6789999999999999999743 2356788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH
Q 001304 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669 (1104)
Q Consensus 590 ~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~ 669 (1104)
.++++.+++|+||+++|+++++|++|++++++|+.|++|||++||+|||+.+||++||++|||+++++. .+.+++...
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~--~i~i~~~~~ 780 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMT--QIIINSNSK 780 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCe--eEEecCCch
Confidence 999999999999999999999999999999999999999999999999999999999999999998765 556666555
Q ss_pred HHHHHHHHHHHHHcc--------------ccCCCCCceEEEEcchhHHHHHH-HHHHHHHhHhhhccceeeeccChhhHH
Q 001304 670 DEVCRSLERVLLTMR--------------ITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKA 734 (1104)
Q Consensus 670 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~lvi~g~~l~~~~~-~~~~~f~~l~~~~~~~i~~r~sP~qK~ 734 (1104)
++....++..+.... .......+.++++||.+++.+++ +.++.|.+++..|+++||||++|+||+
T Consensus 781 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa 860 (1178)
T PLN03190 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKA 860 (1178)
T ss_pred hhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHH
Confidence 444444333221100 00112356789999999999986 466789999999999999999999999
Q ss_pred HHHHHHHhc-CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHHHHhhhhhhhhhhhHHHHhH
Q 001304 735 QLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYS 813 (1104)
Q Consensus 735 ~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~ 813 (1104)
++|+.+|+. +++|+|||||+||++|||+||||||++|+||.||+++|||+|.+|++|.+|+++||||+|.|++++++|+
T Consensus 861 ~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 861 GIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999986 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhh-hhhccCCCCchhhccCCccccccccCcccCchhhH
Q 001304 814 FYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFA 892 (1104)
Q Consensus 814 ~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~-~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~ 892 (1104)
||||+++++++|||+++++|+|+++|++|.+++||++||++|++ +++||+|.+++.++++|++|+.+++++.++.+.|+
T Consensus 941 fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~ 1020 (1178)
T PLN03190 941 FYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHH
Confidence 99999999999999999999999999999999999999999999 67999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhheeecccccceeeeehhhhHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001304 893 GWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIP 972 (1104)
Q Consensus 893 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp 972 (1104)
.|++.|+|||+++|+++++.+.....+..+.+...++.+++...+.+.+++++|+|++++++|+|+++++++.+++..+|
T Consensus 1021 ~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~ 1100 (1178)
T PLN03190 1021 LTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIP 1100 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999998877654333444555666667777778888899999999999999999999998888887777
Q ss_pred CchhHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHhcC
Q 001304 973 SSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERMGG 1030 (1104)
Q Consensus 973 ~~~~~~~~~~~~~~~~~w~~ill~~~~~llp~~i~k~~~~~~~p~~~~~~~e~~~~~~ 1030 (1104)
....|+.++.++.++.||+.++++++++++|++++|++++.++|+.++++|+.++.+.
T Consensus 1101 ~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~ 1158 (1178)
T PLN03190 1101 TLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGT 1158 (1178)
T ss_pred cchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcc
Confidence 5555667778888999999999999999999999999999999999999998765433
No 3
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=2.8e-161 Score=1545.03 Aligned_cols=1001 Identities=39% Similarity=0.690 Sum_probs=878.0
Q ss_pred CCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhhH
Q 001304 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDK 96 (1104)
Q Consensus 17 ~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~~ 96 (1104)
|++|+++|+||++|+|+|++||+||++++|+|||++++++++|.+++.++.++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceEEEEEEC-CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCC-
Q 001304 97 KANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGM- 174 (1104)
Q Consensus 97 ~~n~~~~~V~r~-g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~- 174 (1104)
+.|+++|+|+|+ |++++++|+||+|||||+|++||.||||++||+|++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999997 899999999999999999999999999999999999999999999999999999999987655433
Q ss_pred CHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccCCC
Q 001304 175 DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIP 254 (1104)
Q Consensus 175 ~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~~~ 254 (1104)
...++.++++.++|+.|++++|+|+|++++.+ ++..|++.+|+++|||.+++|+|++|+|+|||++|+++++....
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~----~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~ 236 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTING----DRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQA 236 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECC----CCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCC
Confidence 44567788999999999999999999998743 25568999999999999999889999999999999999999888
Q ss_pred CCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCC--CcchhhhhhhHHHHHHhhhccccchhH
Q 001304 255 EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ--EFPWYELLVIPLRFELLCSIMIPISIK 332 (1104)
Q Consensus 255 ~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~iP~~L~ 332 (1104)
+.|+|++++.+|+++.++++++++++++.++++.+|........||+.... .......+..+++++++++.+||++|+
T Consensus 237 ~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~ 316 (1057)
T TIGR01652 237 PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLY 316 (1057)
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeee
Confidence 999999999999999999988888888887776666543334468764321 111223444566778899999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCc---
Q 001304 333 VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGD--- 409 (1104)
Q Consensus 333 v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~--- 409 (1104)
+++++++.+++++|+||.+|++++.+.++.+|+++++|+||+|+|||+|||||||+|+|+|++|+++|..|+....+
T Consensus 317 v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~ 396 (1057)
T TIGR01652 317 VSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKD 396 (1057)
T ss_pred ehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHH
Confidence 99999999999999999999998888889999999999999999999999999999999999999999988743210
Q ss_pred -----------------------CCCchhhhhhhcc---CCchHHHHHHHHhhhccccccc--CCCCceeeecCCccHHH
Q 001304 410 -----------------------ALKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAK--SKAGAILYKAQSQDEEA 461 (1104)
Q Consensus 410 -----------------------~~~~~~~~~~~~~---~~~~~~~~~~~lalc~~~~~~~--~~~~~~~~~~~~p~e~A 461 (1104)
...++++.+.... ..+...+++.++++||++.+.. ++++.+.|+++||+|.|
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~A 476 (1057)
T TIGR01652 397 AIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAA 476 (1057)
T ss_pred HhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHH
Confidence 0001222222111 1234678999999999999875 22345779999999999
Q ss_pred HHHHHHhcCcEEEeecCc--EEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC--
Q 001304 462 LVHAAAQLHMVLVNKNAS--ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-- 537 (1104)
Q Consensus 462 l~~~a~~~g~~~~~~~~~--~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~-- 537 (1104)
|+++|+..|+.+.+|+.+ .+.++..+....|++++++||+|+||||||+++++ ++++++|+|||||+|+++|...
T Consensus 477 Ll~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~-~~~~~l~~KGA~e~il~~~~~~~~ 555 (1057)
T TIGR01652 477 LVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNP-DGRIKLLCKGADTVIFKRLSSGGN 555 (1057)
T ss_pred HHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeC-CCeEEEEEeCcHHHHHHHhhccch
Confidence 999999999999999887 55566778888999999999999999999999986 5789999999999999999852
Q ss_pred CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCC
Q 001304 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (1104)
Q Consensus 538 ~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~ 617 (1104)
+..+++.+++++|+.+|+|||++|||.++++|+++|.++|+++..++.+|++.+++.++++|+||+|+|++|+||+||++
T Consensus 556 ~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~ 635 (1057)
T TIGR01652 556 QVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEG 635 (1057)
T ss_pred hHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhc
Confidence 23567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHH---HHHHHHHHHcc---ccCCCCC
Q 001304 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVC---RSLERVLLTMR---ITTSEPK 691 (1104)
Q Consensus 618 ~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~ 691 (1104)
++++|+.|++|||++||+|||+++||.+||++||+++++.+ ++.+++.+.++.. ..+.+...... .......
T Consensus 636 v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 636 VPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNME--QIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred cHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCe--EEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999987654 6666665544322 11221111110 0112345
Q ss_pred ceEEEEcchhHHHHHHH-HHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc-CCeEEEEcCCccChhhhhhcCceEEe
Q 001304 692 DVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~-~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
+.+++++|++++.++++ .+++|.++...++++||||++|+||+++|+.+|+. |++|+|||||+||++|||+||||||+
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 78899999999988775 46788888888889999999999999999999997 99999999999999999999999999
Q ss_pred cCCchHHHhhhcceecccchhhHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHH
Q 001304 770 SGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNV 849 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl 849 (1104)
+|++|.||+++|||++.+|++|.+++++|||++|+|+++++.|.||||+++.+++++|.++++|+|+++|++++++|||+
T Consensus 794 ~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~ 873 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNV 873 (1057)
T ss_pred cChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhhhhh-hhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeeccc-------ccce
Q 001304 850 FYTSIPVLV-STIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEK-------SEME 921 (1104)
Q Consensus 850 ~~~~lp~~~-~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~ 921 (1104)
++|++|+++ +++|+|++++.++++|.+|+.++++..++.+.|+.|++.|+|||+++|++++..+.... .+..
T Consensus 874 ~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~ 953 (1057)
T TIGR01652 874 FFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFS 953 (1057)
T ss_pred HHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchh
Confidence 999999995 57899999999999999999999999999999999999999999999998877665321 1234
Q ss_pred eeeehhhhHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHhccCHHHHHHHHHHHHHH
Q 001304 922 EVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIP-SSGMYTIMFRLCSQPSYWITMFLIVAAG 1000 (1104)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp-~~~~~~~~~~~~~~~~~w~~ill~~~~~ 1000 (1104)
.+++..|+.+++...+.+.+.+++|+|+++.++|+|+++|+++.+++...+ ..+.|+.+..++.+|.+|+.++++++++
T Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~ 1033 (1057)
T TIGR01652 954 SVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLIS 1033 (1057)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 556677778888888888889999999999999999999988887776443 4456777788888999999999999999
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHH
Q 001304 1001 MGPIVALKYFRYTYRASKINILQQ 1024 (1104)
Q Consensus 1001 llp~~i~k~~~~~~~p~~~~~~~e 1024 (1104)
++|.++++++++.|+|+.++++||
T Consensus 1034 l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1034 LLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHHHHHHHHHcCCCHHHHhhC
Confidence 999999999999999999999864
No 4
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-147 Score=1218.68 Aligned_cols=968 Identities=33% Similarity=0.522 Sum_probs=844.8
Q ss_pred ccEEEeCCC-cccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHH
Q 001304 2 KRYIYINDD-ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVS 80 (1104)
Q Consensus 2 ~r~i~~n~~-~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~ 80 (1104)
+|++.+... ..++.+|++|.+++.||++++|+|..+++||+-+.|+|||+.++.|++|.+....+.+.|.|+.+++.++
T Consensus 63 ~rt~~~~~~~~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~it 142 (1051)
T KOG0210|consen 63 GRTVNISFGPHYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTIT 142 (1051)
T ss_pred CceeecccCCCcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHH
Confidence 444444431 1467899999999999999999999999999999999999999999999887778889999999999999
Q ss_pred HHHHHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCC
Q 001304 81 ATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1104)
Q Consensus 81 ~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs 160 (1104)
+++++++|++|++.|++.|+...+++........++++|+|||+|.++.|++||||+++|.+++++|+|+|.|..|||||
T Consensus 143 l~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGET 222 (1051)
T KOG0210|consen 143 LIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGET 222 (1051)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhheeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcc
Confidence 99999999999999999999999988433344449999999999999999999999999999999999999999999999
Q ss_pred CceEeeccccccCCCHh-hhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 161 DLKTRLIPAACMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 161 ~~~~K~~~~~~~~~~~~-~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
+.|.|-|.+.+.+++.+ ++.+++ +-.|.|++++++|.|++++.. ++++.+++.+|+++++|.+.+| .++|+|+
T Consensus 223 DWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d---~~~~~~LsventLWanTVvAs~-t~~gvVv 296 (1051)
T KOG0210|consen 223 DWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITD---SDKPESLSVENTLWANTVVASG-TAIGVVV 296 (1051)
T ss_pred cceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEec---CCCCCcccccceeeeeeeEecC-cEEEEEE
Confidence 99999998888777654 677666 889999999999999999854 4455899999999999999998 4999999
Q ss_pred EecCccccccccCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHH
Q 001304 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRF 319 (1104)
Q Consensus 240 ~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1104)
|||.||+..+|...++.|-.-++..+|.+.+++++++++++++......+ ++.|+- .+++|
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----------------~~~wyi---~~~Rf 357 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----------------GSDWYI---YIIRF 357 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----------------CCchHH---HHHHH
Confidence 99999999999999999999999999999999999988888766543211 123333 33688
Q ss_pred HHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEe
Q 001304 320 ELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIG 399 (1104)
Q Consensus 320 ~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~ 399 (1104)
+++++.+||++|-|.++++|.++++.|..|.++- +..+|++++.|+||+|+|+.+|||||||+|+|.++++..+
T Consensus 358 llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~Ip------gtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLG 431 (1051)
T KOG0210|consen 358 LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIP------GTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLG 431 (1051)
T ss_pred HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCC------ceeeecCCChHHhcceEEEEecCcCccccchheeeeeeee
Confidence 8899999999999999999999999888887763 3679999999999999999999999999999999999999
Q ss_pred cEEecCCCCcCCC-------------chhhhhhh-ccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHH
Q 001304 400 GIFYGNETGDALK-------------DVGLLNAI-TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (1104)
Q Consensus 400 ~~~~~~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~ 465 (1104)
-..|..+..+... .+-..... ...+..+.+..+++|+||++.|..++||...|++.||||.|++++
T Consensus 432 Tv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkw 511 (1051)
T KOG0210|consen 432 TVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKW 511 (1051)
T ss_pred eeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEe
Confidence 8877654221110 00000000 111234678899999999999999999999999999999999999
Q ss_pred HHhcCcEEEeecCcEEEEEeC-CeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHH
Q 001304 466 AAQLHMVLVNKNASILEIKFN-GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (1104)
Q Consensus 466 a~~~g~~~~~~~~~~~~~~~~-~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (1104)
....|..+..|+.+.+.+... +...+|+||.++||+|+.|||++|||++.++++.+|.||||.+|-...+. .++++
T Consensus 512 Te~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---NdWle 588 (1051)
T KOG0210|consen 512 TETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---NDWLE 588 (1051)
T ss_pred eeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---chhhh
Confidence 999999999999999988764 56789999999999999999999999998999999999999999887654 37899
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHH-HhccCcEEEEEEeecccCCCChHHHHH
Q 001304 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ-RLEHDLKVLGVTAIEDRLQDGVPETIE 623 (1104)
Q Consensus 545 ~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~-~ie~~l~llG~i~i~D~lr~~~~~~I~ 623 (1104)
+...+||++|+|||++|+|.++++||+.+...|..|+.++.||.+++.++.+ .+|+||++||++|.||+||++|+.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 9999999999999999999999999999999999999999999999999988 999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecC-CcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhH
Q 001304 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (1104)
Q Consensus 624 ~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 702 (1104)
.||+||||+||+|||+.+||+.||++.++++.++. +..+.. ....+....++.. ....+.+++++|++|
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~--ihv~~~v~sr~dah~eL~~l--------R~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQY--IHVIRSVTSRGDAHNELNNL--------RRKTDCALVIDGESL 738 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCce--EEEEEecCCchHHHHHHHHh--------hcCCCcEEEEcCchH
Confidence 99999999999999999999999999999988765 333332 3334444433322 245678999999999
Q ss_pred HHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhc
Q 001304 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781 (1104)
Q Consensus 703 ~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~A 781 (1104)
+..++.+++.|.++...+.+++|||++|.||+++++.+|+ .|..|++||||.||+.|+++||+|||+-|+||.||.-+|
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 9999999999999999999999999999999999999997 589999999999999999999999999999999999999
Q ss_pred ceecccchhhHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhc
Q 001304 782 DYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI 861 (1104)
Q Consensus 782 D~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~ 861 (1104)
||.|.+|+++.+|+++|||.+|.|.+++.+|.+.|.++++.+|..|+....|...++|..+.|..|..++|.+|++.+++
T Consensus 819 DfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~ 898 (1051)
T KOG0210|consen 819 DFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVL 898 (1051)
T ss_pred cccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeecccccceeeeehhhhHHHHHHHHhhhh
Q 001304 862 DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVAL 941 (1104)
Q Consensus 862 ~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1104)
|+|++++..+.+|++|+.-..++.++.++|..|++-++|||.++.++++..+. .+...+..++|++.++..++.+++
T Consensus 899 d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~---~ef~~ivaisFtaLi~tELiMVaL 975 (1051)
T KOG0210|consen 899 DRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFD---TEFIHIVAISFTALILTELIMVAL 975 (1051)
T ss_pred cccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhh---hhheEeeeeeeHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999887665543 223345567888888888889999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHH
Q 001304 942 ETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINI 1021 (1104)
Q Consensus 942 ~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~~~~~w~~ill~~~~~llp~~i~k~~~~~~~p~~~~~ 1021 (1104)
..+.|+|...++-..++..+++... +...|.. .....+..|++-+.++.+++++|.++.|+++|.+.|+.+.+
T Consensus 976 tv~tw~~~m~vae~lsL~~Yivsl~------~l~~yfd-~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 976 TVRTWHWLMVVAELLSLALYIVSLA------FLHEYFD-RYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHH------HHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh
Confidence 9999998877766666555543322 2221111 11122666777788889999999999999999999999988
Q ss_pred HH
Q 001304 1022 LQ 1023 (1104)
Q Consensus 1022 ~~ 1023 (1104)
++
T Consensus 1049 l~ 1050 (1051)
T KOG0210|consen 1049 LQ 1050 (1051)
T ss_pred cc
Confidence 75
No 5
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-117 Score=1111.57 Aligned_cols=812 Identities=28% Similarity=0.400 Sum_probs=637.4
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCc-chhhHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPA-STWGPLIFIFAVSATKEAWDDY 89 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~-~~~~~l~~i~~i~~~~~~~~d~ 89 (1104)
+|++.||.|+++..+. ++| +.++.||.++++..+++.++++++... ..+. .....++.+++++++..++|++
T Consensus 52 ~r~~~~G~N~~~~~~~~~~~----~~fl~~f~~~~~~iL~~~a~~s~~~~~--~~~~~~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 52 RRLKKYGPNELPEEKKRSLL----KKFLRQFKDPFIILLLVAALLSAFVGD--WVDAGVDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHhhcCCccccccccCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhhc--ccccCcceeeehHHHHHHHHHHHHHHH
Confidence 4778999999998765 555 889999999999888888888776542 1111 2333445566677777888999
Q ss_pred HHhh---hhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEee
Q 001304 90 NRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1104)
Q Consensus 90 ~~~~---~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1104)
++.+ +++++.+.+++|+|||++++|+|+||||||||+|++||+||||++|+++++ ++||||+|||||.|+.|+
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K~ 201 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEKQ 201 (917)
T ss_pred HHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhcc
Confidence 8854 577888999999999999999999999999999999999999999998886 699999999999999997
Q ss_pred ccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccc
Q 001304 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1104)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1104)
+..... .+.| ..++.+|++|+||.+++| .+.|+|++||++|+
T Consensus 202 ~~~~~~---------------~~~~----------------------~~~d~~n~l~sGt~V~~G-~~~giVvaTG~~T~ 243 (917)
T COG0474 202 ALPLTK---------------SDAP----------------------LGLDRDNMLFSGTTVVSG-RAKGIVVATGFETE 243 (917)
T ss_pred cccccc---------------cccc----------------------ccCCccceEEeCCEEEcc-eEEEEEEEEcCccH
Confidence 542110 0000 003678999999999999 69999999999999
Q ss_pred cccccCCC--C-CCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhh
Q 001304 247 LGMTRGIP--E-PKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (1104)
Q Consensus 247 ~~~~~~~~--~-~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1104)
+|+++... . .+.+++++.++++...++.+.++++++.++.+.+ . ...+|.+.+.. .+.++
T Consensus 244 ~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~-~-------------~~~~~~~~~~~---~v~l~ 306 (917)
T COG0474 244 FGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF-R-------------GGNGLLESFLT---ALALA 306 (917)
T ss_pred HHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-------------cCccHHHHHHH---HHHHH
Confidence 99987732 2 5789999999999999999888888777766521 1 01124555544 34589
Q ss_pred hccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEe
Q 001304 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY 403 (1104)
Q Consensus 324 ~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 403 (1104)
+++||++||+++++++.+++..+.+| + +++|+++++|+||++++||||||||||+|+|+|+++++++.
T Consensus 307 va~IPegLp~~vti~la~g~~~mak~------~----~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~-- 374 (917)
T COG0474 307 VAAVPEGLPAVVTIALALGAQRMAKD------N----AIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG-- 374 (917)
T ss_pred HhccccchHHHHHHHHHHHHHHHHhc------c----chhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--
Confidence 99999999999999999998855433 3 67899999999999999999999999999999999999851
Q ss_pred cCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEE
Q 001304 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483 (1104)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~ 483 (1104)
..+ .+ + .....++...+++.++++||++.+..+ + .+..+||+|.||++++.+.|+.. +.
T Consensus 375 ~~~-~~---~-----~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~---~~----- 433 (917)
T COG0474 375 GKD-ID---D-----KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL---DL----- 433 (917)
T ss_pred ccc-cc---c-----cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC---CH-----
Confidence 000 00 0 011123345578999999999988765 3 67899999999999999998743 11
Q ss_pred EeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc--------CCchhHHHHHHHHHHhccc
Q 001304 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--------GQQTRTFVEAVEQYSQLGL 555 (1104)
Q Consensus 484 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~--------~~~~~~~~~~~~~~a~~Gl 555 (1104)
......|++++.+||||+|||||++++.. +|++++++|||||+|+++|+. ++.++.+++..++|+++||
T Consensus 434 --~~~~~~~~~~~~~PFdS~rKrMsviv~~~-~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~gl 510 (917)
T COG0474 434 --SGLEVEYPILAEIPFDSERKRMSVIVKTD-EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGL 510 (917)
T ss_pred --HHHhhhcceeEEecCCCCceEEEEEEEcC-CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 23345668999999999999999999964 566999999999999999984 2234678999999999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEE
Q 001304 556 RTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635 (1104)
Q Consensus 556 R~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~ml 635 (1104)
|||++|||.++.++... .. +.+|+||+|+|+++|+||+|+++++||+.|++|||++||+
T Consensus 511 Rvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~Mi 569 (917)
T COG0474 511 RVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMI 569 (917)
T ss_pred HHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEE
Confidence 99999999776543210 11 5789999999999999999999999999999999999999
Q ss_pred cCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHh
Q 001304 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 715 (1104)
Q Consensus 636 TGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~ 715 (1104)
||||++||.+||++||+...... .++++|..+..+.++ .+.+
T Consensus 570 TGD~~~TA~aIa~~~Gi~~~~~~-----------------------------------~~vi~G~el~~l~~~---el~~ 611 (917)
T COG0474 570 TGDHVETAIAIAKECGIEAEAES-----------------------------------ALVIDGAELDALSDE---ELAE 611 (917)
T ss_pred CCCCHHHHHHHHHHcCCCCCCCc-----------------------------------eeEeehHHhhhcCHH---HHHH
Confidence 99999999999999998554320 567888888777665 2222
Q ss_pred HhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH
Q 001304 716 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 716 l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
.. .+..||||++|+||.++|+.+|+.|++|+|+|||+||+||||+||||||| |.+|+++++ +||+++.++++....
T Consensus 612 ~~--~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam-g~~Gtdaak~Aadivl~dd~~~~i~ 688 (917)
T COG0474 612 LV--EELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKEAADIVLLDDNFATIV 688 (917)
T ss_pred Hh--hhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe-cccHHHHHHhhcceEeecCcHHHHH
Confidence 22 22349999999999999999999999999999999999999999999999 767888887 889999988886555
Q ss_pred -HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccC
Q 001304 795 -ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQH 873 (1104)
Q Consensus 795 -ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~ 873 (1104)
+++|||++|.|+++++.|.+++|+...+.++++.+++.+ ..||+++|++|+|++++++|++++++++ ++.+.|++
T Consensus 689 ~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~--~~~~~m~~ 764 (917)
T COG0474 689 LAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED--PESDVMKR 764 (917)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC--Cccccccc
Confidence 579999999999999999999999999998888887766 6789999999999999999999888874 78889999
Q ss_pred CccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeeccccc--------ceeeeehhhhH---HHHHHHHhhhhc
Q 001304 874 PQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSE--------MEEVSMVALSG---CIWLQAFVVALE 942 (1104)
Q Consensus 874 p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~~~ 942 (1104)
|| .++...+|+.+.++.|++...+++.++++++|..+...... .....+..|.. +.+++.+.++..
T Consensus 765 ~~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~ 841 (917)
T COG0474 765 PP---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR 841 (917)
T ss_pred CC---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 96 47888899999999999998888888887776655432211 11122333333 334444555555
Q ss_pred cccch---HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHH
Q 001304 943 TNSFT---VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFL 995 (1104)
Q Consensus 943 ~~~~~---~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill 995 (1104)
.+.|. ++.+..+|+.+++..++.++..+.|.... ..+.... +...|+..++
T Consensus 842 ~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~--~~f~~~~~~~~~~~~~~~ 896 (917)
T COG0474 842 GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNL--KIFQPTPLSLFEWLIAIA 896 (917)
T ss_pred ccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHh--hhccCCCCcHHHHHHHHH
Confidence 44432 23577777777777777666666555431 2233322 4455654433
No 6
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-117 Score=1009.92 Aligned_cols=864 Identities=21% Similarity=0.259 Sum_probs=647.0
Q ss_pred ccccCCCCceeecCC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~ 90 (1104)
.|++.||.|+++... .+.| +.+++||.+++..++|+.|+++++... +...+.+.++++++++..++|+|+
T Consensus 31 ~r~~~yG~Nel~~ee~~~~w----k~vLeQF~n~Li~iLL~sA~ISfvl~~-----~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 31 RRRKKYGENELPAEEGESLW----KLVLEQFDNPLILILLLSAAISFVLAD-----FDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHhcCCccCccccCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHHh-----cccceeeeeeeeeeeeeeeeeehh
Confidence 478899999999866 4666 999999999999999999999987542 222233445556778888999999
Q ss_pred Hhhh---hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeec
Q 001304 91 RYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1104)
Q Consensus 91 ~~~~---~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1104)
..|+ ++++.+..|+|+|+|+.+.+++++|||||||.|+-||+||||.+|++..+ +.||||+|||||.|+.|.+
T Consensus 102 aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~t 177 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKDT 177 (972)
T ss_pred hHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccccC
Confidence 9885 56778899999999999999999999999999999999999999999887 8999999999999999954
Q ss_pred cccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccc
Q 001304 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKL 247 (1104)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~ 247 (1104)
... | .+++..--+..|++|+||.+++| .+.|+|+.||.+|.+
T Consensus 178 ~~v--------------------~-----------------~~~~~~~~dk~NiaFsGT~V~~G-~a~GIVi~TG~nTei 219 (972)
T KOG0202|consen 178 DAV--------------------P-----------------KDENADVQDKKNIAFSGTLVVAG-RAKGIVIGTGLNTEI 219 (972)
T ss_pred ccc--------------------c-----------------CCCCCccccceeeEeecceeecC-ceeEEEEeccccchH
Confidence 210 0 01111112688999999999999 799999999999999
Q ss_pred ccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHh-h-ccccccccccccceeeccCCCcchhhhhhhHHHHHHh
Q 001304 248 GMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLG-T-AGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (1104)
Q Consensus 248 ~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (1104)
|++.. ..+..+||+|+.++.+...+.-+..++++... + ++++. .-.+...|+ ..+..+|.++++ +
T Consensus 220 G~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~-~p~~~g~~f------k~~~~~f~IaVs---L 289 (972)
T KOG0202|consen 220 GKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL-DPVHGGSWF------KGALYYFKIAVS---L 289 (972)
T ss_pred HHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-cccccccch------hchhhhhhHHHH---H
Confidence 98754 45666899999999999887733333333222 2 22111 000011121 234455555554 8
Q ss_pred hhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEE
Q 001304 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (1104)
Q Consensus 323 ~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 402 (1104)
.+++||+|||+.++....++.. +|.+++ +.+|++..+|+||.+++||||||||||+|+|++.++++.+..
T Consensus 290 AVAAIPEGLPaVvT~tLALG~~------rMakkn----aIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~ 359 (972)
T KOG0202|consen 290 AVAAIPEGLPAVVTTTLALGTR------RMAKKN----AIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGG 359 (972)
T ss_pred HHHhccCCCcchhhhhHHHhHH------HHHhhh----hhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccc
Confidence 8899999998655544444444 777665 889999999999999999999999999999999999998765
Q ss_pred ecCCC-----Cc-------CCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcC
Q 001304 403 YGNET-----GD-------ALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 470 (1104)
Q Consensus 403 ~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g 470 (1104)
+.... +. ...+...-.......+.+.+++...++||.+....++. ......|.|+|.||..++.+.|
T Consensus 360 ~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~ 438 (972)
T KOG0202|consen 360 TATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMG 438 (972)
T ss_pred cccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcC
Confidence 54431 10 00000000011223456889999999999988776554 3334479999999999999999
Q ss_pred cEEEeecCc-EEEEEe-CC-eeEEEEEEEEeccCCCCeeEEEEEEeCCC-CcEEEEecChHHhhhhhhcc-----C----
Q 001304 471 MVLVNKNAS-ILEIKF-NG-SVLQYEILETLEFTSDRKRMSVVVKDCHS-GNISLLSKGADEAILPYAHA-----G---- 537 (1104)
Q Consensus 471 ~~~~~~~~~-~~~~~~-~~-~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~~l~~KGa~e~i~~~~~~-----~---- 537 (1104)
+.-...... ...-+. +. -.+.++...++||+|+||+|||.+.++.+ ..+.+|+|||+|.|+++|.. +
T Consensus 439 l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~ 518 (972)
T KOG0202|consen 439 LPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKV 518 (972)
T ss_pred CCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceee
Confidence 754221100 000000 00 12345666999999999999999997643 34899999999999999952 1
Q ss_pred ----CchhHHHHHHHHHHhccceEEEEEEEecCH---HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEee
Q 001304 538 ----QQTRTFVEAVEQYSQLGLRTLCLAWREVEE---DEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAI 610 (1104)
Q Consensus 538 ----~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~---~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i 610 (1104)
..++.+.+...+|+.+|||+|++|+++... ++...| ...+ +...|+||+|+|++||
T Consensus 519 pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~---------~~s~--------~~~~E~~LtFvGlVGi 581 (972)
T KOG0202|consen 519 PLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLN---------DTSN--------RATAESDLTFVGLVGI 581 (972)
T ss_pred eCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhc---------cccc--------ccccccceEEEEEeec
Confidence 124678999999999999999999997663 111110 0111 2467899999999999
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
.||+|++++++|+.|++|||+|.|+|||+.+||.+||++.|+...+.+..-..+.|.+.+++.
T Consensus 582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls----------------- 644 (972)
T KOG0202|consen 582 LDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLS----------------- 644 (972)
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCC-----------------
Confidence 999999999999999999999999999999999999999999877653222234444333321
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
++..+ ....+..+|+|++|++|.+||+.||+.|++|+|+|||+||+|+||.|||||||
T Consensus 645 ----------------~~~~~-----~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM- 702 (972)
T KOG0202|consen 645 ----------------DEELD-----DAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM- 702 (972)
T ss_pred ----------------HHHHH-----HHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee-
Confidence 11111 11345789999999999999999999999999999999999999999999999
Q ss_pred CCchHHHhh-hcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhcccc-chhhhHHHHHHH
Q 001304 771 GREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSG-TSLFNSVSLMAY 847 (1104)
Q Consensus 771 g~~~~~a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g-~~~~~~~~ll~~ 847 (1104)
|..|+++++ +||+||.|++|..++ .+.|||.+|+|+++++.|.+..|+.-....++ ....| +.+++++|+||+
T Consensus 703 G~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l----~aa~~~p~pL~pvQiLWi 778 (972)
T KOG0202|consen 703 GISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFL----TAAFGIPEPLIPVQILWI 778 (972)
T ss_pred cCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHH----HHHhCCCCcccchhhhee
Confidence 877777766 999999999998887 47899999999999999998888754333332 22233 356899999999
Q ss_pred HHHhhhhhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeec--cc-c------
Q 001304 848 NVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY--EK-S------ 918 (1104)
Q Consensus 848 nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~-~------ 918 (1104)
|+++|++|+.++++| |++.++|++|| +..+..+++.+.+++++..|+|.++.........+.. .. +
T Consensus 779 NlvtDG~PA~aLG~e--p~D~DiM~kpP---R~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~ 853 (972)
T KOG0202|consen 779 NLVTDGPPATALGFE--PVDPDIMKKPP---RDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAH 853 (972)
T ss_pred eeeccCCchhhcCCC--CCChhHHhCCC---CCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcc
Confidence 999999999999998 69999999999 4788889999999998888888765544433322221 10 0
Q ss_pred -------------------cceeeeehhhhHHHHHHHHhhhhccccc---hHHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 001304 919 -------------------EMEEVSMVALSGCIWLQAFVVALETNSF---TVFQHLAIWGNLVAFYIINWIFSAIPSSGM 976 (1104)
Q Consensus 919 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~sii~~~i~~~~~~~vp~~~~ 976 (1104)
...++.+..|+..=+++.++++.+..+. ..+.|.++.+++...++.++++.|+|.++
T Consensus 854 ~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~- 932 (972)
T KOG0202|consen 854 YNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQ- 932 (972)
T ss_pred hhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhh-
Confidence 0113444444444455556666655442 34667777778888889999999999887
Q ss_pred HHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 001304 977 YTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTYR 1015 (1104)
Q Consensus 977 ~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~~ 1015 (1104)
..|++.. ++..|+.++.+..-.++.++++|++.|.+.
T Consensus 933 --~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 933 --RIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred --hhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 3455543 899999999999999999999999998664
No 7
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=3.3e-112 Score=1074.69 Aligned_cols=868 Identities=20% Similarity=0.226 Sum_probs=638.1
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~ 90 (1104)
+|+++||+|+++.++. ++| +.+++||.++++++++++++++++.. .+...+.++++++++++..++|+++
T Consensus 34 ~rl~~~G~N~l~~~~~~s~~----~~~l~q~~~~~~~iL~~aails~~~~-----~~~~~~iIl~vv~in~~i~~~QE~~ 104 (1053)
T TIGR01523 34 HRLKEVGENRLEADSGIDAK----AMLLHQVCNAMCMVLIIAAAISFAMH-----DWIEGGVISAIIALNILIGFIQEYK 104 (1053)
T ss_pred HHHHHcCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHh-----hHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5889999999999875 555 88999999999988888888887643 2223345566777888999999999
Q ss_pred Hhhh---hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeec
Q 001304 91 RYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1104)
Q Consensus 91 ~~~~---~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1104)
+.++ .+++.+.+++|+|||++++|+++||||||||.|++||+||||++|+++++ +.||||+|||||.|+.|.+
T Consensus 105 aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~~ 180 (1053)
T TIGR01523 105 AEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKDA 180 (1053)
T ss_pred HHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceeccc
Confidence 8875 45667789999999999999999999999999999999999999998776 9999999999999999964
Q ss_pred cccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccc
Q 001304 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKL 247 (1104)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~ 247 (1104)
.... . .+.+....+..|++|+||.+.+| .+.|+|++||.+|.+
T Consensus 181 ~~~~------------------~------------------~~~~~~~~d~~n~lf~GT~V~~G-~g~~vVvatG~~T~~ 223 (1053)
T TIGR01523 181 HATF------------------G------------------KEEDTPIGDRINLAFSSSAVTKG-RAKGICIATALNSEI 223 (1053)
T ss_pred cccc------------------c------------------ccccCCcccCCCccccCceEEee-eEEEEEEEecCccHH
Confidence 2100 0 00011112567999999999998 699999999999999
Q ss_pred ccccCCC--------C------------------------------CCcChHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 001304 248 GMTRGIP--------E------------------------------PKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV 289 (1104)
Q Consensus 248 ~~~~~~~--------~------------------------------~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 289 (1104)
|++.... + ...||+++.+++++.+++.+.+++++++++....
T Consensus 224 GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~ 303 (1053)
T TIGR01523 224 GAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF 303 (1053)
T ss_pred HHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9875411 0 0148999999999998888777766655543210
Q ss_pred ccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCcccccccccc
Q 001304 290 WKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAIS 369 (1104)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~ 369 (1104)
..+...+..+ +.+++++||++||+.++++..++++ +|.+++ +++|+++++
T Consensus 304 -----------------~~~~~~~~~a---v~l~Va~VPegLp~~vti~La~g~~------rMak~~----~lVr~L~av 353 (1053)
T TIGR01523 304 -----------------DVDKEVAIYA---ICLAISIIPESLIAVLSITMAMGAA------NMSKRN----VIVRKLDAL 353 (1053)
T ss_pred -----------------hhhHHHHHHH---HHHHHHHcccchHHHHHHHHHHHHH------HHHhcC----CEeccchhh
Confidence 0112233322 3477899999999888887777776 666554 899999999
Q ss_pred ccccceEEEEecCCCCCCCcceEEEEEEEecE-EecCCC---------CcC--C--------C-----chhhhhh----h
Q 001304 370 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGI-FYGNET---------GDA--L--------K-----DVGLLNA----I 420 (1104)
Q Consensus 370 E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~-~~~~~~---------~~~--~--------~-----~~~~~~~----~ 420 (1104)
|+||++++||+|||||||+|+|+|+++++++. .|.... ++. . . +.+.... .
T Consensus 354 EtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (1053)
T TIGR01523 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDEL 433 (1053)
T ss_pred hhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998752 221100 000 0 0 0000000 0
Q ss_pred c-----c--CCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEe---------ecC-cEEEE
Q 001304 421 T-----S--GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN---------KNA-SILEI 483 (1104)
Q Consensus 421 ~-----~--~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~---------~~~-~~~~~ 483 (1104)
. . .++...+++.+.++||++....++++......|||+|.||+++|.+.|+.... ..+ ....+
T Consensus 434 ~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 513 (1053)
T TIGR01523 434 KEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSL 513 (1053)
T ss_pred cccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccc
Confidence 0 0 11235678899999998776532211111236899999999999998874210 000 00000
Q ss_pred E---eCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC----C---------chhHHHHHH
Q 001304 484 K---FNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q---------QTRTFVEAV 547 (1104)
Q Consensus 484 ~---~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~----~---------~~~~~~~~~ 547 (1104)
+ ..+....|++++.+||||+|||||+++++++++++++|+|||||.|+++|+.. . ..+++.+++
T Consensus 514 ~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~ 593 (1053)
T TIGR01523 514 SQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANM 593 (1053)
T ss_pred ccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHH
Confidence 0 01124568999999999999999999997544468999999999999999631 0 135678889
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
++|+++|+|||++|||.++++++..+ .+.. ...+ .+.+|+||+|+|+++++||+|++++++|+.|++
T Consensus 594 ~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~~~--------~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~ 660 (1053)
T TIGR01523 594 ESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ETLN--------RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQ 660 (1053)
T ss_pred HHHHhcCCeEEEEEEEECCchhccch--hhhc---cccc--------hhhhccCCEEEEEEeeecCCchhHHHHHHHHHH
Confidence 99999999999999999987553211 1100 0001 135789999999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHH
Q 001304 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (1104)
Q Consensus 628 aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 707 (1104)
+||++||+|||++.||.++|+++||..++.. . .. .......+++|..++.+.+
T Consensus 661 aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~----~-~~----------------------~~~~~~~vitG~~l~~l~~ 713 (1053)
T TIGR01523 661 AGINVHMLTGDFPETAKAIAQEVGIIPPNFI----H-DR----------------------DEIMDSMVMTGSQFDALSD 713 (1053)
T ss_pred CCCEEEEECCCCHHHHHHHHHHcCCCCcccc----c-cc----------------------cccccceeeehHHhhhcCH
Confidence 9999999999999999999999999764311 0 00 0001236888988876654
Q ss_pred HHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHH-Hhhhcceecc
Q 001304 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ-AARAADYSIG 786 (1104)
Q Consensus 708 ~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~-a~~~AD~vl~ 786 (1104)
+..+ ++ .....||||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |..|++ |+++||+++.
T Consensus 714 ~~l~---~~--~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm-g~~gt~vak~aADivl~ 787 (1053)
T TIGR01523 714 EEVD---DL--KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDASDIVLS 787 (1053)
T ss_pred HHHH---HH--hhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec-CCCccHHHHHhcCEEEe
Confidence 3222 21 234679999999999999999999999999999999999999999999999 654555 5569999999
Q ss_pred cchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccc--hhhhHHHHHHHHHHhhhhhhhhhhcc
Q 001304 787 KFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGT--SLFNSVSLMAYNVFYTSIPVLVSTID 862 (1104)
Q Consensus 787 ~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~--~~~~~~~ll~~nl~~~~lp~~~~~~~ 862 (1104)
++++ +..+ +.|||++|+|+++++.|.+++|+...++.+++.++..++|. .+++++|++|+|++++++|++++++|
T Consensus 788 dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e 866 (1053)
T TIGR01523 788 DDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE 866 (1053)
T ss_pred cCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC
Confidence 8555 4554 69999999999999999999999988888888888777775 36899999999999999999998887
Q ss_pred CCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhhe-eec--cc-------------cc---ceee
Q 001304 863 KDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHV-YAY--EK-------------SE---MEEV 923 (1104)
Q Consensus 863 ~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~--~~-------------~~---~~~~ 923 (1104)
++++++|++||+ .+...+++..+++.++..+++.+++.+...+.. +.+ +. .. ..++
T Consensus 867 --~~~~~~m~~~Pr---~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~ 941 (1053)
T TIGR01523 867 --KAAPDLMDRLPH---DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSA 941 (1053)
T ss_pred --CCChhHHhcCCC---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHH
Confidence 689999999995 556678888888778888888776554433211 110 00 00 1223
Q ss_pred eehhhhHHHHHHHHhhhhcccc-ch-----------------HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc
Q 001304 924 SMVALSGCIWLQAFVVALETNS-FT-----------------VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS 985 (1104)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~ 985 (1104)
.|.+++.+.+++.++++....+ |. .+.+..++.++++.+++++++.++|..+. .+|++.+
T Consensus 942 ~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~--~~f~~~~ 1019 (1053)
T TIGR01523 942 AFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVIND--DVFKHKP 1019 (1053)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhh--hhhccCC
Confidence 3334444445555666554332 21 23566777777777778888888887641 1444443
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 986 -QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 986 -~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
++ .|+.++.+.++.++...+.|+++|.+
T Consensus 1020 l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1020 IGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred cch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44 67777777777777788888887654
No 8
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-113 Score=977.72 Aligned_cols=831 Identities=21% Similarity=0.293 Sum_probs=621.6
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC----CcchhhHH---HHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN----PASTWGPL---IFIFAVSATK 83 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~----~~~~~~~l---~~i~~i~~~~ 83 (1104)
.|++.||+|.++..+. ++| .++||.|++..-++++++|++++..++...+ |+.+...+ ++|++++++.
T Consensus 127 ~Rr~~fG~N~~p~k~~K~Fl----~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 127 RRRKIFGSNTYPEKPPKGFL----RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHhcCCCCCCCCCCccHH----HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 4788999999999885 666 7799999999988888899988877665433 33333332 2333456665
Q ss_pred HHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCce
Q 001304 84 EAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLK 163 (1104)
Q Consensus 84 ~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~ 163 (1104)
++-++.+=.+.+++..+.++.|+|||+.++|+..||+||||+.|+.||++||||+++++++ +.||||+|||||+++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~v 278 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDHV 278 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcce
Confidence 5544444444556667789999999999999999999999999999999999999998887 999999999999999
Q ss_pred EeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecC
Q 001304 164 TRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGN 243 (1104)
Q Consensus 164 ~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~ 243 (1104)
.|.+ +.+-++++||++.+| .+.++|+.+|.
T Consensus 279 ~k~~-------------------------------------------------~~dPfLlSGTkv~eG-sgkMlVTaVGm 308 (1034)
T KOG0204|consen 279 QKSL-------------------------------------------------DKDPFLLSGTKVMEG-SGKMLVTAVGM 308 (1034)
T ss_pred eccC-------------------------------------------------CCCCeEeecceeecC-cceEEEEEeee
Confidence 9832 345689999999998 79999999999
Q ss_pred ccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhc---ccccccc-cccc-ceeeccCCCcchhhhhhh
Q 001304 244 ETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA---GNVWKDT-EARK-QWYVLYPQEFPWYELLVI 315 (1104)
Q Consensus 244 ~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 315 (1104)
+|..|++.. ......+|+|-.+++++..+..+.++++.+..++ .++.... ..+. .|-. .....+.++-
T Consensus 309 nt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~----~~~~~~~~v~ 384 (1034)
T KOG0204|consen 309 NTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTW----SDEYIQEFVK 384 (1034)
T ss_pred cchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccc----cHHHHHHHHH
Confidence 999998654 3444789999999999887766665555443332 1111110 0000 0100 0011222222
Q ss_pred HHHH-HHhhhccccchhH--HHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceE
Q 001304 316 PLRF-ELLCSIMIPISIK--VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMI 392 (1104)
Q Consensus 316 ~~~~-~~l~~~~iP~~L~--v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~ 392 (1104)
++.+ ..+++.++|+||| ||+++++.+. +|.+++ .++|.+++||++|..+.||+|||||||.|+|+
T Consensus 385 ~f~i~VTilVVAVPEGLPLAVTLsLAys~k--------kMmkD~----~LVRhL~ACETMGsAT~ICsDKTGTLT~N~Mt 452 (1034)
T KOG0204|consen 385 FFIIAVTILVVAVPEGLPLAVTLSLAYSMK--------KMMKDN----NLVRHLDACETMGSATAICSDKTGTLTTNRMT 452 (1034)
T ss_pred HhhheeEEEEEECCCCccHHHHHHHHHHHH--------HHhcch----hHHHHhHHHhhcCCceEEEecCcCceEeeeEE
Confidence 2222 1267889999986 5566665554 555554 77999999999999999999999999999999
Q ss_pred EEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHH-HHHHHhhhcccccccCCC-CceeeecCCccHHHHHHHHHhcC
Q 001304 393 FRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIR-FLTVMAVCNTVIPAKSKA-GAILYKAQSQDEEALVHAAAQLH 470 (1104)
Q Consensus 393 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lalc~~~~~~~~~~-~~~~~~~~~p~e~Al~~~a~~~g 470 (1104)
+.+.|+++..|..+..+. ..-++.+.+ ++.+++...+.....++. |....+.|||+|.||+.++.++|
T Consensus 453 VV~~~~~~~~~k~~~~~~----------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG 522 (1034)
T KOG0204|consen 453 VVQSYIGSEHYKVNSPKS----------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLG 522 (1034)
T ss_pred EEeeeeccccccccCccc----------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhC
Confidence 999999998876433221 112233333 344555554443333333 32345689999999999999999
Q ss_pred cEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc------------CC
Q 001304 471 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA------------GQ 538 (1104)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~------------~~ 538 (1104)
.++ +..+.+.++.+++||+|+||+|+++++.++++.| +|+|||.|.++.+|.. ++
T Consensus 523 ~~~------------~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~ 589 (1034)
T KOG0204|consen 523 MDF------------QDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNED 589 (1034)
T ss_pred cch------------HhhcchhheeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHH
Confidence 876 3445667899999999999999999998855555 9999999999999973 12
Q ss_pred chhHHHHHHHHHHhccceEEEEEEEecCHH--HHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCC
Q 001304 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEED--EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 616 (1104)
Q Consensus 539 ~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~--e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~ 616 (1104)
....+++.++.||++||||+|+|||+.... +..+|.. .+..+.+|+++|++||+||.||
T Consensus 590 ~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~laivGIkDPvRP 650 (1034)
T KOG0204|consen 590 DRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLLAIVGIKDPVRP 650 (1034)
T ss_pred HHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEEEEeeccCCCCC
Confidence 234688999999999999999999995433 1112211 1356789999999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEE
Q 001304 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFV 696 (1104)
Q Consensus 617 ~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 696 (1104)
||+++|+.|++|||.|.|+||||..||.+||.+|||++++.+ ...++|.+..
T Consensus 651 gV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr-------------------------- 702 (1034)
T KOG0204|consen 651 GVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFR-------------------------- 702 (1034)
T ss_pred CcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhh--------------------------
Confidence 999999999999999999999999999999999999998765 4445554433
Q ss_pred EcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 697 VDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 697 i~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
.+.++.+. ....+-.|.+|.+|.+|..+|+.|++.|++|+++|||.||+|||++||||.|| |-+|++
T Consensus 703 -------~~s~ee~~-----~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAM-GIaGTe 769 (1034)
T KOG0204|consen 703 -------ELSQEERD-----KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAM-GIAGTE 769 (1034)
T ss_pred -------hcCHHHHH-----hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhc-cccchh
Confidence 22222111 22455689999999999999999999999999999999999999999999999 888887
Q ss_pred Hhh-hcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhh
Q 001304 777 AAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSI 854 (1104)
Q Consensus 777 a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~l 854 (1104)
+++ +||++|+|++|.+.. .+.|||..|.+++|+++|++.-|++..++.|.-+. .+|.+|++++||||+|++||.|
T Consensus 770 VAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~---~~~dsPLtAVQlLWVNLIMDTL 846 (1034)
T KOG0204|consen 770 VAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSAC---ATGDSPLTAVQLLWVNLIMDTL 846 (1034)
T ss_pred hhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhh---hcCCccHHHHHHHHHHHHHHHH
Confidence 776 999999999998776 57999999999999999999999875555544333 4567899999999999999999
Q ss_pred hhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheee----ccc-----ccceeeee
Q 001304 855 PVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA----YEK-----SEMEEVSM 925 (1104)
Q Consensus 855 p~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~-----~~~~~~~~ 925 (1104)
.+++++.| ||.+.+|++|| +||+..+++..||.+.+++++||-+++|.+.+..-. ... ....|.-|
T Consensus 847 gALALATe--pPt~~Lm~RkP---~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIF 921 (1034)
T KOG0204|consen 847 GALALATE--PPTDELMKRKP---VGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIF 921 (1034)
T ss_pred HHHHhccC--CCChHHhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeeh
Confidence 99999998 47777999998 699999999999999999999999999988764322 111 12235555
Q ss_pred hhhhHHHHHHHHhhhhccccchHH----HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHH
Q 001304 926 VALSGCIWLQAFVVALETNSFTVF----QHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAG 1000 (1104)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~ 1000 (1104)
.+|+.|.+|+-++.+-. +..+++ ++..+.+.+.+.++++.++..+ .+ .++.+.. ++..|++++++.++.
T Consensus 922 NtFV~~qvFNEinaRki-~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF--~g---~~~st~~L~~~qWl~ci~~g~~s 995 (1034)
T KOG0204|consen 922 NTFVFCQVFNEINARKI-DERNVFKGIFRNRLFCVIITITVVSQVIIVEF--GG---AFFSTTPLSLTQWLWCIFIGVLS 995 (1034)
T ss_pred hHHHHHHHHHHHhhcch-hHHhHHHHHhcCceEEEEeeeeeehhhhhhhh--cC---cceeeecccHHHHHHHHHHHHHH
Confidence 55555555555555421 222332 3333333344444454443322 22 2233322 899999999999888
Q ss_pred HHHHHHHHHHHHh
Q 001304 1001 MGPIVALKYFRYT 1013 (1104)
Q Consensus 1001 llp~~i~k~~~~~ 1013 (1104)
++.-.+.|.+...
T Consensus 996 l~~g~~ik~iP~~ 1008 (1034)
T KOG0204|consen 996 LPWGQLLKCIPVS 1008 (1034)
T ss_pred HHHHHHheecccc
Confidence 8888888876443
No 9
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=4.3e-110 Score=1060.43 Aligned_cols=867 Identities=19% Similarity=0.237 Sum_probs=640.7
Q ss_pred ccccCCCCceeecCCCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------cCCcchhhHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--------VNPASTWGPLIFIFAVSAT 82 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~-~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~--------~~~~~~~~~l~~i~~i~~~ 82 (1104)
+|+++||+|+++.++.+ +| +.|++||.+++++.++++++++++..... .+.+...++++++++++++
T Consensus 44 ~rl~~~G~N~l~~~~~~~~~----~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 119 (997)
T TIGR01106 44 EILARDGPNALTPPPTTPEW----VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGC 119 (997)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHH
Confidence 58899999999887654 54 88999999999998888888866532110 0122333567778888999
Q ss_pred HHHHHHHHHhhhhHhhc---ceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCC
Q 001304 83 KEAWDDYNRYLSDKKAN---EKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1104)
Q Consensus 83 ~~~~~d~~~~~~~~~~n---~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGE 159 (1104)
+++++++|+++++++++ +.+++|+|||++++|+++||||||+|.|++||.|||||+|+++++ +.||||+||||
T Consensus 120 i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LTGE 195 (997)
T TIGR01106 120 FSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLTGE 195 (997)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccCCC
Confidence 99999999988766554 569999999999999999999999999999999999999997654 89999999999
Q ss_pred CCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
|.|+.|.+.. ....|++.+|++|+||.+.+| ++.|+|+
T Consensus 196 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~l~~Gt~v~~G-~~~~~V~ 233 (997)
T TIGR01106 196 SEPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TARGIVV 233 (997)
T ss_pred CCceeccCCC-----------------------------------------cccCccccCCeEEeccEeeee-eEEEEEE
Confidence 9999996421 112345778999999999998 7999999
Q ss_pred EecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhH
Q 001304 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (1104)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1104)
+||.+|++|++.+ ..+.+++|+++.+++++..+..+.+++++++++++... ...|.+.+..+
T Consensus 234 ~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 298 (997)
T TIGR01106 234 NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL---------------GYTWLEAVIFL 298 (997)
T ss_pred EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCHHHHHHHH
Confidence 9999999999876 44566799999999999887777666665544433111 11334444333
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEE
Q 001304 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (1104)
Q Consensus 317 ~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 396 (1104)
+ .+++.++|++|+++++++...++. +|.+. ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 299 i---~v~v~~iP~~L~~~v~i~l~~~~~------~m~~~----~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~ 365 (997)
T TIGR01106 299 I---GIIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 365 (997)
T ss_pred H---HHHhhcCCccchHHHHHHHHHHHH------HHHHC----CcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEE
Confidence 3 356677999999988888887766 44433 4899999999999999999999999999999999999
Q ss_pred EEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCc---eeeecCCccHHHHHHHHHhcCcEE
Q 001304 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~---~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
++++..|..+..+.... . ...........++.++++||++.+..+.++. -.+..+||+|.||++++.+.+...
T Consensus 366 ~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~ 441 (997)
T TIGR01106 366 WFDNQIHEADTTEDQSG-V---SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV 441 (997)
T ss_pred EECCeEEecCCccCCCC-c---cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH
Confidence 99887775432111100 0 0011123344688899999988765432221 124468999999999998644321
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeC--CCCcEEEEecChHHhhhhhhcc----CC-------ch
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHA----GQ-------QT 540 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~--~~~~~~l~~KGa~e~i~~~~~~----~~-------~~ 540 (1104)
.+.+..|+.++.+||+|+||||+++++.. +++++++|+|||||.|+++|+. +. ..
T Consensus 442 ------------~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~ 509 (997)
T TIGR01106 442 ------------MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELK 509 (997)
T ss_pred ------------HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHH
Confidence 12244678899999999999999988642 2356899999999999999962 11 13
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHH-HHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChH
Q 001304 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE-WSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVP 619 (1104)
Q Consensus 541 ~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~-~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~ 619 (1104)
+.+.+++++|+++|+|||++|||.++++++++ |.. +++ ..+..|+||+|+|+++++||+|++++
T Consensus 510 ~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~ 574 (997)
T TIGR01106 510 EAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVP 574 (997)
T ss_pred HHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc----------cch-----hhhccccCcEEEEEEeccCCChHHHH
Confidence 45788899999999999999999998655432 110 000 01244899999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
++|++|+++||+++|+|||++.||.++|+++|+++++.. ..+++.+.+....+. .+..+...++++|
T Consensus 575 ~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~---------~~~~i~~~~~~~~~~----~~~~~~~~~vi~G 641 (997)
T TIGR01106 575 DAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE---------TVEDIAARLNIPVSQ----VNPRDAKACVVHG 641 (997)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcc---------chhhhhhhccccccc----cccccccceEEEh
Confidence 999999999999999999999999999999999876532 011111111100000 0112233589999
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA- 778 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~- 778 (1104)
.+++.+.++ .+.++...+...||||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |+.|++++
T Consensus 642 ~~l~~l~~~---el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam-g~~G~~vak 717 (997)
T TIGR01106 642 SDLKDMTSE---QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDVSK 717 (997)
T ss_pred HHhhhCCHH---HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec-CCcccHHHH
Confidence 999876553 2333333334579999999999999999999999999999999999999999999999 76666654
Q ss_pred hhcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhh
Q 001304 779 RAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVL 857 (1104)
Q Consensus 779 ~~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~ 857 (1104)
++||+++.+++|.... ++.|||++|.|+++++.|.+++|+...++.+++.++. +..+++++|++|+|+++|++|++
T Consensus 718 ~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qlL~inli~d~lp~~ 794 (997)
T TIGR01106 718 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN---IPLPLGTITILCIDLGTDMVPAI 794 (997)
T ss_pred HhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc---CcchhHHHHHHHHHHHHHHHHHH
Confidence 5899999986664443 3699999999999999999999999888888877653 34578999999999999999999
Q ss_pred hhhccCCCCchhhccCCccccccccCcccCchhhHHHHH-HHHHHHHHHHHHhhheee---------ccc----c-----
Q 001304 858 VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYA---------YEK----S----- 918 (1104)
Q Consensus 858 ~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~---------~~~----~----- 918 (1104)
++++| ++++.+|++||+ ..+.+.+++..+++.+++ .+++++++.++..+..+. +.. .
T Consensus 795 al~~e--~~~~~~m~~~P~--~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 870 (997)
T TIGR01106 795 SLAYE--KAESDIMKRQPR--NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWIN 870 (997)
T ss_pred HHhcC--CCCcccccCCCc--CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccc
Confidence 98887 588889998885 234668888888877665 577887766554432110 000 0
Q ss_pred ----c------ce-------eeeehhhhHH---HHHHHHhhhhcccc-ch-HHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 001304 919 ----E------ME-------EVSMVALSGC---IWLQAFVVALETNS-FT-VFQHLAIWGNLVAFYIINWIFSAIPSSGM 976 (1104)
Q Consensus 919 ----~------~~-------~~~~~~~~~~---~~~~~~~~~~~~~~-~~-~~~~~~i~~sii~~~i~~~~~~~vp~~~~ 976 (1104)
. .. .+.+..|..+ .+++.++++....+ |. .+.+..++.++++.++++++..++|.++
T Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~- 949 (997)
T TIGR01106 871 DLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMG- 949 (997)
T ss_pred ccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhH-
Confidence 0 00 1233444444 44455566654333 31 1445666666666666666667777654
Q ss_pred HHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 977 YTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 977 ~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
.++++.+ ++.+|+.++.+.++.++...+.|++++.+
T Consensus 950 --~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 950 --VALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred --HHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3455543 78889888888888877778888887653
No 10
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=3.2e-107 Score=1028.02 Aligned_cols=845 Identities=21% Similarity=0.270 Sum_probs=623.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccc-----CCcchhhHHHHHHHHHHHHHHHHHHHHhhhh---HhhcceEEEEEEC
Q 001304 37 LWEQFSRFMNQYFLLIACLQLWSLITPV-----NPASTWGPLIFIFAVSATKEAWDDYNRYLSD---KKANEKEVWVVKQ 108 (1104)
Q Consensus 37 l~~qf~~~~n~~~l~~~~l~~~~~~~~~-----~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~---~~~n~~~~~V~r~ 108 (1104)
+++||+++++++++++++++++....+. ..+...+.++++++++++..+++++++.++. +++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 4789999999999999999998754331 1122223444666678888999999987754 4456789999999
Q ss_pred CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEe
Q 001304 109 GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188 (1104)
Q Consensus 109 g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~ 188 (1104)
|++++|+++||||||||.|++||.|||||+|+++++ |.||||+|||||.|+.|.+...
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~------------------ 138 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESV------------------ 138 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCccccccccc------------------
Confidence 999999999999999999999999999999997765 9999999999999999964210
Q ss_pred cCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccC---CCCCCcChHHHHH
Q 001304 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMI 265 (1104)
Q Consensus 189 ~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~ 265 (1104)
| +++..+.+.+|++|+||.+.+| ++.++|++||.+|++|++.+ ..+.+++++++.+
T Consensus 139 --~------------------~~~~~~~~~~n~l~~GT~v~~G-~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l 197 (917)
T TIGR01116 139 --P------------------DERAVNQDKKNMLFSGTLVVAG-KARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKL 197 (917)
T ss_pred --C------------------ccccCcccccceeeeCCEEecc-eEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHH
Confidence 0 1111234678999999999998 79999999999999998543 5567789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHH-HHHHhhhccccchhHHHHHHHHHHHHH
Q 001304 266 DKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL-RFELLCSIMIPISIKVSLDLVKSLYAK 344 (1104)
Q Consensus 266 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~iP~~L~v~l~l~~~~~~~ 344 (1104)
++++..++.+.++++++.++++..+ |........|...+...+ ..+.+++.++|++|+++++++...++.
T Consensus 198 ~~~~~~l~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~ 268 (917)
T TIGR01116 198 DEFGELLSKVIGLICILVWVINIGH---------FNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 268 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---------hccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHH
Confidence 9998887776666655544432111 000000112222222111 223477889999999999999888887
Q ss_pred HhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCC-----CCcCCCc-hhhhh
Q 001304 345 FIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE-----TGDALKD-VGLLN 418 (1104)
Q Consensus 345 ~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~-----~~~~~~~-~~~~~ 418 (1104)
+|.++ ++++|+++++|+||++++||||||||||+|+|+|++++..+..+... .+..... .+..+
T Consensus 269 ------~m~~~----~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (917)
T TIGR01116 269 ------KMAKK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIK 338 (917)
T ss_pred ------HHHHC----CcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccc
Confidence 44433 38899999999999999999999999999999999998765321000 0000000 00000
Q ss_pred h---h-ccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCC----eeE
Q 001304 419 A---I-TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG----SVL 490 (1104)
Q Consensus 419 ~---~-~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~----~~~ 490 (1104)
. . ...++...+++.++++||++....++++......+||+|.||++++.+.|+....+..+.......+ ...
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 418 (917)
T TIGR01116 339 DDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWND 418 (917)
T ss_pred cCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHh
Confidence 0 0 0012335678889999999876543222111125899999999999999886654433332222222 235
Q ss_pred EEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc-----CC-------chhHHHHHHHHHHh-ccceE
Q 001304 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFVEAVEQYSQ-LGLRT 557 (1104)
Q Consensus 491 ~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~-----~~-------~~~~~~~~~~~~a~-~GlR~ 557 (1104)
.|++++.+||||+|||||++++. ++++.+|+|||||.|+++|+. +. ..+++.+++++|++ +|+||
T Consensus 419 ~~~~~~~~pF~s~rK~msviv~~--~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRv 496 (917)
T TIGR01116 419 KFKKLATLEFSRDRKSMSVLCKP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRC 496 (917)
T ss_pred hcceeeecccChhhCeEEEEEee--CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeE
Confidence 68899999999999999999986 467899999999999999963 11 13457888999999 99999
Q ss_pred EEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcC
Q 001304 558 LCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTG 637 (1104)
Q Consensus 558 l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTG 637 (1104)
|++|||.+++++.. +. ..+ ....+.+|+||+|+|+++++||+|++++++|+.|+++||++||+||
T Consensus 497 l~~A~k~~~~~~~~-~~---------~~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTG 561 (917)
T TIGR01116 497 LALAFKDIPDPREE-DL---------LSD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITG 561 (917)
T ss_pred EEEEEEECCccccc-cc---------ccc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecC
Confidence 99999999764321 00 000 0123568999999999999999999999999999999999999999
Q ss_pred CCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHh
Q 001304 638 DKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 717 (1104)
Q Consensus 638 D~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~ 717 (1104)
|+.+||.++|+++|+..++.+ +. ...++|..++.+.++. . ..
T Consensus 562 D~~~tA~~ia~~~gi~~~~~~--v~-------------------------------~~~~~g~~l~~~~~~~---~--~~ 603 (917)
T TIGR01116 562 DNKETAEAICRRIGIFSPDED--VT-------------------------------FKSFTGREFDEMGPAK---Q--RA 603 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCcc--cc-------------------------------ceeeeHHHHhhCCHHH---H--HH
Confidence 999999999999999765432 10 1123444433322111 1 12
Q ss_pred hhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc--chhhHHHH
Q 001304 718 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLI 795 (1104)
Q Consensus 718 ~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~--f~~l~~ll 795 (1104)
..++..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+| |+..+.++++||+++.+ |+.+..+
T Consensus 604 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~-g~g~~~ak~aAD~vl~dd~f~~i~~~- 681 (917)
T TIGR01116 604 ACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM-GSGTEVAKEASDMVLADDNFATIVAA- 681 (917)
T ss_pred hhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC-CCCcHHHHHhcCeEEccCCHHHHHHH-
Confidence 2456789999999999999999999999999999999999999999999999 54333455699999998 4455655
Q ss_pred HhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCc
Q 001304 796 LVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQ 875 (1104)
Q Consensus 796 l~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~ 875 (1104)
+.|||++|+|+++++.|.+++|+...++++++.++. ...+|+++|++|+|++++++|++++++| ++++.+|++||
T Consensus 682 i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qll~inli~d~lp~~~l~~~--~~~~~~m~~pP 756 (917)
T TIGR01116 682 VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG---IPEGLIPVQLLWVNLVTDGLPATALGFN--PPDKDIMWKPP 756 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc---CCchHHHHHHHHHHHHHHHHHHHHHhcC--CcchhHhcCCC
Confidence 599999999999999999999998888888776642 2357999999999999999999988887 47789999999
Q ss_pred cccccccCcccCchhhHHHHHHHHHHHHHHHHHhhhee---ecc-----------------------cccceeeeehhhh
Q 001304 876 ILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVY---AYE-----------------------KSEMEEVSMVALS 929 (1104)
Q Consensus 876 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~-----------------------~~~~~~~~~~~~~ 929 (1104)
+ .+.+++++.++++.|++.|++++++.++..++.+ ++. .....|+.|.+++
T Consensus 757 ~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v 833 (917)
T TIGR01116 757 R---RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLV 833 (917)
T ss_pred C---CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHH
Confidence 4 6678899999999999999999977443322211 110 0011234455555
Q ss_pred HHHHHHHHhhhhcccc-ch--HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHH
Q 001304 930 GCIWLQAFVVALETNS-FT--VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIV 1005 (1104)
Q Consensus 930 ~~~~~~~~~~~~~~~~-~~--~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~ 1005 (1104)
.+.+++.|+++....+ |. .+.+..+|+++++.+++++++.++|+++ .++++.+ ++..|+.++.+.++.++...
T Consensus 834 ~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~e 910 (917)
T TIGR01116 834 VIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLS---RIFGVTPLSLTDWLMVLKLSLPVILVDE 910 (917)
T ss_pred HHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHH---HHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6666667777775444 32 2456667777777777777777888765 4455543 88999888887777777778
Q ss_pred HHHHHH
Q 001304 1006 ALKYFR 1011 (1104)
Q Consensus 1006 i~k~~~ 1011 (1104)
+.|+++
T Consensus 911 ~~k~~~ 916 (917)
T TIGR01116 911 VLKFFS 916 (917)
T ss_pred HHHHHh
Confidence 888765
No 11
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=5e-107 Score=1030.41 Aligned_cols=823 Identities=21% Similarity=0.279 Sum_probs=597.8
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cccCCcchh---hHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI-----TPVNPASTW---GPLIFIFAVSAT 82 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~-----~~~~~~~~~---~~l~~i~~i~~~ 82 (1104)
+|+++||+|+++.++. ++| +.+++||+++++++++++++++++... .+.++...| +.++++++++.+
T Consensus 68 ~r~~~yG~N~l~~~~~~s~~----~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~ 143 (941)
T TIGR01517 68 RREKVYGKNELPEKPPKSFL----QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVL 143 (941)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhH
Confidence 5888999999999876 455 789999999999999999999887542 112222222 122222333334
Q ss_pred HHHHHHHHHhh----hhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCC
Q 001304 83 KEAWDDYNRYL----SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDG 158 (1104)
Q Consensus 83 ~~~~~d~~~~~----~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtG 158 (1104)
..++++++..+ .++..++.+++|+|||++++|+++||||||||.|++||.|||||+|++++ .+.||||+|||
T Consensus 144 i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~LTG 219 (941)
T TIGR01517 144 VTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSITG 219 (941)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecccCC
Confidence 44555555444 33344577999999999999999999999999999999999999999654 49999999999
Q ss_pred CCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEE
Q 001304 159 ETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238 (1104)
Q Consensus 159 Es~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvV 238 (1104)
||.|+.|.+ ...|++|+||.+.+| .+.++|
T Consensus 220 ES~pv~K~~-------------------------------------------------~~~n~v~~GT~v~~G-~~~~iV 249 (941)
T TIGR01517 220 ESDPIKKGA-------------------------------------------------PKDSFLLSGTVVNEG-SGRMLV 249 (941)
T ss_pred CCCcccccC-------------------------------------------------CCCceEEeCCeEEee-EEEEEE
Confidence 999999953 235799999999998 799999
Q ss_pred EEecCccccccccCC--CCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccc---cccccccccceeeccCCCcchhhhh
Q 001304 239 VYTGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGN---VWKDTEARKQWYVLYPQEFPWYELL 313 (1104)
Q Consensus 239 v~tG~~T~~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1104)
++||.+|.+|++... ...+++++++.++++...+..+.++++++.++++. ++.....+. +.......++.+.+
T Consensus 250 ~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 327 (941)
T TIGR01517 250 TAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDG--RDTEEDAQTFLDHF 327 (941)
T ss_pred EEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--cccchhhHHHHHHH
Confidence 999999999986442 12345799999999888776665555444433221 111000000 00000001223333
Q ss_pred hhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEE
Q 001304 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (1104)
Q Consensus 314 ~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 393 (1104)
..++.+++.++|++|++.+.++....+. +|.+++ +++|+++++|+||++++||||||||||+|+|++
T Consensus 328 ---~~al~llv~~iP~~Lp~~vti~l~~~~~------~mak~~----ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v 394 (941)
T TIGR01517 328 ---IIAVTIVVVAVPEGLPLAVTIALAYSMK------KMMKDN----NLVRHLAACETMGSATAICSDKTGTLTQNVMSV 394 (941)
T ss_pred ---HHHHHHHHhhCCCchHHHHHHHHHHHHH------HHHhCC----CEEechHHhhhccCceEEEEcCcCceeeceEEE
Confidence 3334578889999987655555544443 565543 889999999999999999999999999999999
Q ss_pred EEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEE
Q 001304 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
++++.++..+..++. .. ..++...+++...+.||+..+...++....+..+||+|.|+++++++.|...
T Consensus 395 ~~~~~~~~~~~~~~~--------~~---~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~ 463 (941)
T TIGR01517 395 VQGYIGEQRFNVRDV--------LR---NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDY 463 (941)
T ss_pred EEEEEecceEecCcc--------cc---cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCH
Confidence 999887654432210 00 0112344556666666665543221111124579999999999998876432
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC-----C------chhH
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----Q------QTRT 542 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~-----~------~~~~ 542 (1104)
. ..+..|++++.+||+|+||||+++++.+ ++++++++|||||.|+++|+.- . ..++
T Consensus 464 ~------------~~~~~~~~~~~~pF~s~~k~msvv~~~~-~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~ 530 (941)
T TIGR01517 464 Q------------EVRAEEKVVKIYPFNSERKFMSVVVKHS-GGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDR 530 (941)
T ss_pred H------------HHHhhchhccccccCCCCCeEEEEEEeC-CCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHH
Confidence 0 1123467788999999999999999975 5679999999999999999631 1 1346
Q ss_pred HHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHH
Q 001304 543 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETI 622 (1104)
Q Consensus 543 ~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I 622 (1104)
+.+.+++++++|+||+++|||.++.++++.| +..|+||+|+|+++++||+|++++++|
T Consensus 531 i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI 588 (941)
T TIGR01517 531 CADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGIKDPLRPGVREAV 588 (941)
T ss_pred HHHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeeccCCCchhHHHHH
Confidence 7888999999999999999999876543221 234789999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhH
Q 001304 623 ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (1104)
Q Consensus 623 ~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 702 (1104)
+.|+++||+++|+|||++.||.++|++|||.+++.. +++|+.+
T Consensus 589 ~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~-------------------------------------vi~G~~~ 631 (941)
T TIGR01517 589 QECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGL-------------------------------------AMEGKEF 631 (941)
T ss_pred HHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCce-------------------------------------EeeHHHh
Confidence 999999999999999999999999999999765432 3444444
Q ss_pred HHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHH-hhhc
Q 001304 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA-ARAA 781 (1104)
Q Consensus 703 ~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a-~~~A 781 (1104)
+...++ .+.+ ...+..+|||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |.+|+++ +++|
T Consensus 632 ~~l~~~---el~~--~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm-g~~gtdvAk~aA 705 (941)
T TIGR01517 632 RRLVYE---EMDP--ILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM-GISGTEVAKEAS 705 (941)
T ss_pred hhCCHH---HHHH--HhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec-CCCccHHHHHhC
Confidence 433221 1111 1345689999999999999999999999999999999999999999999999 6455554 4599
Q ss_pred ceecccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhh
Q 001304 782 DYSIGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVS 859 (1104)
Q Consensus 782 D~vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~ 859 (1104)
|++++++++ +..+ +.|||++|+|+++++.|.+++|+...++.++..++. +..+++++|++|+|++++++|++++
T Consensus 706 DivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~---~~~pl~~~qil~inl~~d~~~al~l 781 (941)
T TIGR01517 706 DIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCIS---STSPLTAVQLLWVNLIMDTLAALAL 781 (941)
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccHHHHHHHHHHHHHHHhhHHHH
Confidence 999997665 4544 599999999999999999999998877777666554 3568999999999999999999988
Q ss_pred hccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheee---ccc---------ccceeeeehh
Q 001304 860 TIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA---YEK---------SEMEEVSMVA 927 (1104)
Q Consensus 860 ~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~---------~~~~~~~~~~ 927 (1104)
++| ++++++|++||+ .+..++++..++..+++.+++++++.+++.+.... ... ...+|+.|.+
T Consensus 782 ~~e--~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~ 856 (941)
T TIGR01517 782 ATE--PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNT 856 (941)
T ss_pred ccC--CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHH
Confidence 887 588999999995 55667889999999999999998877766543221 111 1122333444
Q ss_pred hhHHHHHHHHhhhhccc--cc-hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHH
Q 001304 928 LSGCIWLQAFVVALETN--SF-TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGP 1003 (1104)
Q Consensus 928 ~~~~~~~~~~~~~~~~~--~~-~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp 1003 (1104)
++.+.+++.++++.... .| .++++..+|..+++.+++++++. ++. ..++++.+ ++..|+.++++.++.++.
T Consensus 857 ~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~--~~~---~~~f~~~~l~~~~w~~~~~~~~~~~~~ 931 (941)
T TIGR01517 857 FVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIV--EFG---GSFFSTVSLSIEQWIGCVLLGMLSLIF 931 (941)
T ss_pred HHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHH--HHH---HHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 44555555666665432 23 23456666665555555554433 222 24555544 788898888777777777
Q ss_pred HHHHHHH
Q 001304 1004 IVALKYF 1010 (1104)
Q Consensus 1004 ~~i~k~~ 1010 (1104)
.++.|.+
T Consensus 932 ~~~~~~~ 938 (941)
T TIGR01517 932 GVLLRLI 938 (941)
T ss_pred HHHHHhc
Confidence 6777765
No 12
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.2e-103 Score=993.67 Aligned_cols=817 Identities=20% Similarity=0.244 Sum_probs=619.9
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHH-HHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQF-SRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf-~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~ 89 (1104)
+|+++||+|+++.++. ++| +.+++|| +++++++++++++++++.+ .+..+ +.++++++++++.++++++
T Consensus 32 ~r~~~~G~N~i~~~~~~s~~----~~~l~~~~~~~~~~~L~~aa~ls~~~g----~~~~~-~~i~~~i~~~~~i~~~qe~ 102 (884)
T TIGR01522 32 HRRAFHGWNEFDVEEDESLW----KKFLSQFVKNPLILLLIASAVISVFMG----NIDDA-VSITLAILIVVTVGFVQEY 102 (884)
T ss_pred HHHHhcCCCcCCCCCCCCHH----HHHHHHHhhChHHHHHHHHHHHHHHHc----chhhH-HHHHhHHHHHHHHHHHHHH
Confidence 5889999999998765 555 8899999 9999988888888887643 22222 3334445566777899999
Q ss_pred HHhhhhH---hhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEee
Q 001304 90 NRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1104)
Q Consensus 90 ~~~~~~~---~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1104)
++.++.+ ++.+.+++|+|||++++|+++||||||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 103 ~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K~ 178 (884)
T TIGR01522 103 RSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSKV 178 (884)
T ss_pred HHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceecc
Confidence 8877654 456789999999999999999999999999999999999999997654 899999999999999996
Q ss_pred ccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccc
Q 001304 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1104)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1104)
+..... +......+.+|++|+||.+.+| .+.++|++||.+|.
T Consensus 179 ~~~~~~-------------------------------------~~~~~~~~~~n~v~~GT~v~~G-~~~~~V~~tG~~T~ 220 (884)
T TIGR01522 179 TAPIPA-------------------------------------ATNGDLAERSNIAFMGTLVRCG-HGKGIVVGTGSNTE 220 (884)
T ss_pred cccccc-------------------------------------cccccccccCceEEeCCEEEee-eEEEEEEEecCccH
Confidence 532100 0001122567999999999998 69999999999999
Q ss_pred cccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhh
Q 001304 247 LGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (1104)
Q Consensus 247 ~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1104)
+|++.+ .....++++++.+++++..+..+.+++++++++++++. ..++...+..++ .++
T Consensus 221 ~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~v---~ll 282 (884)
T TIGR01522 221 FGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ---------------GKDWLEMFTISV---SLA 282 (884)
T ss_pred HHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCHHHHHHHHH---HHH
Confidence 998754 34556799999999999877666554444433332111 123455554443 367
Q ss_pred hccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEe
Q 001304 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY 403 (1104)
Q Consensus 324 ~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 403 (1104)
+.++|++||+.+.++...... +|.++ ++++|+++++|+||++++||||||||||+|+|++++++..+..+
T Consensus 283 v~aiP~~Lp~~vt~~l~~~~~------r~ak~----~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~ 352 (884)
T TIGR01522 283 VAAIPEGLPIIVTVTLALGVL------RMSKK----RAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLH 352 (884)
T ss_pred HHHccchHHHHHHHHHHHHHH------HHhhc----CCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceE
Confidence 889999998776666665554 55544 48899999999999999999999999999999999998765432
Q ss_pred cCCCC-------cCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEee
Q 001304 404 GNETG-------DALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476 (1104)
Q Consensus 404 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~ 476 (1104)
...+. +...+.+... ...++...+++.+.++||++..... ++. ..+||+|.|+++++++.|+..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~-~~~---~~g~p~e~All~~~~~~~~~~--- 423 (884)
T TIGR01522 353 TMLNAVSLNQFGEVIVDGDVLH--GFYTVAVSRILEAGNLCNNAKFRNE-ADT---LLGNPTDVALIELLMKFGLDD--- 423 (884)
T ss_pred eeccCCccCCCCcccccccccc--cccCHHHHHHHHHHhhhCCCeecCC-CCC---cCCChHHHHHHHHHHHcCcHh---
Confidence 11000 0000000000 0112345678888999998765432 121 247999999999998877531
Q ss_pred cCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc-----CC-------chhHHH
Q 001304 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFV 544 (1104)
Q Consensus 477 ~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~-----~~-------~~~~~~ 544 (1104)
....|+.++.+||+|+||||+++++...++++++|+|||||.|+++|.. +. ..+++.
T Consensus 424 -----------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~ 492 (884)
T TIGR01522 424 -----------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQ 492 (884)
T ss_pred -----------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHH
Confidence 1234678899999999999999998765678999999999999999963 11 124577
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHH
Q 001304 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (1104)
Q Consensus 545 ~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~ 624 (1104)
+++++++++|+|++++|||.+ +++|+|+|+++++||+|++++++|+.
T Consensus 493 ~~~~~~a~~G~rvl~~A~~~~---------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~ 539 (884)
T TIGR01522 493 EEAAEMASAGLRVIAFASGPE---------------------------------KGQLTFLGLVGINDPPRPGVKEAVTT 539 (884)
T ss_pred HHHHHHHhcCCEEEEEEEEcC---------------------------------CCCeEEEEEEeccCcchhHHHHHHHH
Confidence 888999999999999999865 25899999999999999999999999
Q ss_pred HHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHH
Q 001304 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (1104)
Q Consensus 625 l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 704 (1104)
|+++||+++|+|||+..||.++|+++|+...... +++|+.++.
T Consensus 540 l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------------~v~g~~l~~ 582 (884)
T TIGR01522 540 LITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-------------------------------------SVSGEKLDA 582 (884)
T ss_pred HHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------eeEhHHhHh
Confidence 9999999999999999999999999999765432 123333332
Q ss_pred HHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcce
Q 001304 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADY 783 (1104)
Q Consensus 705 ~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~ 783 (1104)
..++ .+.+ ...+..+|||++|+||..+|+.+|+.|+.|+|+|||.||+||+++|||||+| |.+++++++ +||+
T Consensus 583 ~~~~---~l~~--~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~-g~~g~~va~~aaDi 656 (884)
T TIGR01522 583 MDDQ---QLSQ--IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEAADM 656 (884)
T ss_pred CCHH---HHHH--HhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec-CCCcCHHHHHhcCE
Confidence 2111 1111 1345789999999999999999999999999999999999999999999999 766777765 8999
Q ss_pred ecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhcc
Q 001304 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTID 862 (1104)
Q Consensus 784 vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~ 862 (1104)
++.++++.... ++.+||.+|+|+++++.|.+..|+...++.+++.++ ....+++++|++|+|++++++|++++++|
T Consensus 657 vl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~---~~~~pl~~~qiL~inl~~d~~~a~~l~~e 733 (884)
T TIGR01522 657 ILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLM---GFPNPLNAMQILWINILMDGPPAQSLGVE 733 (884)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH---cCCCchhHHHHHHHHHHHHhhHHHHhccC
Confidence 99987665444 369999999999999999999998755544433332 33467999999999999999999988887
Q ss_pred CCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeeccc--ccceeeeehhhhHHHHHHHHhhh
Q 001304 863 KDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFVVA 940 (1104)
Q Consensus 863 ~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 940 (1104)
++++.+|++||+ .+.++++++.++..+++.|++++++.+++.+..+.... ....|+.|.+|+.+.+++.++++
T Consensus 734 --~~~~~~m~~~P~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r 808 (884)
T TIGR01522 734 --PVDKDVMRKPPR---PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITARDTTMTFTCFVFFDMFNALACR 808 (884)
T ss_pred --CCChhHhhCCCC---CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHc
Confidence 588899999984 67788999999998888898887765554333221111 11235566677777777788887
Q ss_pred hccccc---hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 941 LETNSF---TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 941 ~~~~~~---~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
....++ .++++..+|+.+++.+++++++.++|.++ .++.+.+ ++..|+.++++.++.++..++.|+++|.+
T Consensus 809 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 809 SQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQ---SVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 754442 23567778887777777777778887655 4455544 88899988888888888888899887653
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.2e-99 Score=971.18 Aligned_cols=770 Identities=19% Similarity=0.253 Sum_probs=563.5
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~ 91 (1104)
+|+++||+|++..++.++| +.+++||.+|+++++++.+++.++- +.+...+.++++++++.+...+++++.
T Consensus 147 ~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~-----~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 147 QRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD-----EYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999877766 8899999999986666654444321 122222334445556777788888887
Q ss_pred hhhhHhhc--ceEEEEEECCeEEEEeccCCccceEEEEe--cCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeec
Q 001304 92 YLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLR--ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1104)
Q Consensus 92 ~~~~~~~n--~~~~~V~r~g~~~~i~~~~lvvGDIV~l~--~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1104)
.++.+++. +..++|+|||++++|+++||||||||.|+ +||.|||||+|+ +|.|.||||+|||||.|+.|.+
T Consensus 218 ~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll-----~g~~~VdES~LTGES~Pv~K~~ 292 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGESVPVLKFP 292 (1054)
T ss_pred HHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEE-----eCcEEEecccccCCccceeccc
Confidence 77766653 56899999999999999999999999999 999999999999 5669999999999999999975
Q ss_pred cccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceecc------CceEEEEEEEe
Q 001304 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN------TEWACGVAVYT 241 (1104)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~------~~~~~gvVv~t 241 (1104)
..... ..+.++ ...+...+|++|+||.+.. .+.+.|+|++|
T Consensus 293 ~~~~~-----------------~~~~~~----------------~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~T 339 (1054)
T TIGR01657 293 IPDNG-----------------DDDEDL----------------FLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRT 339 (1054)
T ss_pred CCccc-----------------cccccc----------------cccccccceEEEcCCEEEEEecCCCCCcEEEEEEeC
Confidence 32100 000000 0012256899999999974 23699999999
Q ss_pred cCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHH
Q 001304 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLR 318 (1104)
Q Consensus 242 G~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (1104)
|.+|..|++.+ .++++.+++++...+++.+++.++++.+++..+.+ .. .+.++...+ +.
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~--------------~~~~~~~~~---l~ 401 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IK--------------DGRPLGKII---LR 401 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--------------cCCcHHHHH---HH
Confidence 99999998765 34556788999988887766555443332222111 10 112334444 44
Q ss_pred HHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEE
Q 001304 319 FELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCI 398 (1104)
Q Consensus 319 ~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~ 398 (1104)
++.+++.++|++||+.++++...... +|.+. ++.||++..+|+||+++++|||||||||+|+|+|.+++.
T Consensus 402 ~l~iiv~~vP~~LP~~~ti~l~~~~~------rL~k~----~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~ 471 (1054)
T TIGR01657 402 SLDIITIVVPPALPAELSIGINNSLA------RLKKK----GIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQG 471 (1054)
T ss_pred HHHHHHhhcCchHHHHHHHHHHHHHH------HHHHC----CEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEec
Confidence 55688899999999888887777655 55544 489999999999999999999999999999999999876
Q ss_pred ecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEe-ec
Q 001304 399 GGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN-KN 477 (1104)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~-~~ 477 (1104)
.+...... .... + ........+..++++||++.... + ...|||.|.|+++++ |+.+.. ..
T Consensus 472 ~~~~~~~~--~~~~-----~---~~~~~~~~~~~~~a~C~~~~~~~---~---~~~Gdp~E~al~~~~---~~~~~~~~~ 532 (1054)
T TIGR01657 472 LSGNQEFL--KIVT-----E---DSSLKPSITHKALATCHSLTKLE---G---KLVGDPLDKKMFEAT---GWTLEEDDE 532 (1054)
T ss_pred ccCccccc--cccc-----c---ccccCchHHHHHHHhCCeeEEEC---C---EEecCHHHHHHHHhC---CCEEECCCC
Confidence 44211000 0000 0 00122335677899999986542 2 236999999999976 333322 11
Q ss_pred C---cE--EEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHHHHHHHHh
Q 001304 478 A---SI--LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQ 552 (1104)
Q Consensus 478 ~---~~--~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~ 552 (1104)
. .. ..+...+....+++++.+||+|++|||||+++.++++++++|+|||||.|+++|+++..++++.+.+++|++
T Consensus 533 ~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~ 612 (1054)
T TIGR01657 533 SAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTR 612 (1054)
T ss_pred cccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHh
Confidence 0 00 001111223679999999999999999999998766778999999999999999977778899999999999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeE
Q 001304 553 LGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 632 (1104)
Q Consensus 553 ~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v 632 (1104)
+|+|||++|||++++.++.++.+ .+ ++++|+||+|+|+++++||+|++++++|+.|++|||++
T Consensus 613 ~G~RVLalA~k~l~~~~~~~~~~---------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v 675 (1054)
T TIGR01657 613 EGYRVLALAYKELPKLTLQKAQD---------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRT 675 (1054)
T ss_pred cCCEEEEEEEeecCccchhhhhh---------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeE
Confidence 99999999999997543322211 01 25689999999999999999999999999999999999
Q ss_pred EEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHH-----HH-HHHHH-------HHHHHc-----cccCCCCCceE
Q 001304 633 WMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTED-----EV-CRSLE-------RVLLTM-----RITTSEPKDVA 694 (1104)
Q Consensus 633 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~-----~~-~~~~~-------~~~~~~-----~~~~~~~~~~~ 694 (1104)
+|+|||++.||.++|++|||++++.. ++..+....+ .+ ....+ ...... ........++.
T Consensus 676 ~miTGD~~~TA~~iA~~~gii~~~~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1054)
T TIGR01657 676 VMITGDNPLTAVHVARECGIVNPSNT--LILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYH 753 (1054)
T ss_pred EEECCCCHHHHHHHHHHcCCCCCCce--EEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceE
Confidence 99999999999999999999876532 2222110000 00 00000 000000 00011234567
Q ss_pred EEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCch
Q 001304 695 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREG 774 (1104)
Q Consensus 695 lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~ 774 (1104)
++++|+.++.+.+...+.+.++ ..+..||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||++.
T Consensus 754 ~~itG~~l~~l~~~~~~~l~~~--~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-- 829 (1054)
T TIGR01657 754 LAMSGKAFAVLQAHSPELLLRL--LSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-- 829 (1054)
T ss_pred EEEEcHHHHHHHHhhHHHHHHH--HhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc--
Confidence 9999999988765544455544 345679999999999999999999999999999999999999999999999433
Q ss_pred HHHhhhcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhh
Q 001304 775 LQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTS 853 (1104)
Q Consensus 775 ~~a~~~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~ 853 (1104)
+|+.+||+++.++++-... ++.+||.++.++.++++|.+..+++..+..++ ..+.| .+++++|++|+|+++++
T Consensus 830 -das~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~----l~~~~-~~l~~~Q~l~i~li~~~ 903 (1054)
T TIGR01657 830 -EASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI----LYLIG-SNLGDGQFLTIDLLLIF 903 (1054)
T ss_pred -cceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHcc-CcCccHHHHHHHHHHHH
Confidence 3678999999977664443 46899999999988887776665544332221 11223 56789999999999999
Q ss_pred hhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhhe
Q 001304 854 IPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHV 912 (1104)
Q Consensus 854 lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 912 (1104)
+|++++.++ +|++.+|++|| ...++++.++...++++++++++.++..+..
T Consensus 904 ~~~l~l~~~--~p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~ 954 (1054)
T TIGR01657 904 PVALLMSRN--KPLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFEL 954 (1054)
T ss_pred HHHHHHHcC--CchhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988887 58889999988 2588999998888888888888776665443
No 14
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=8e-100 Score=952.43 Aligned_cols=804 Identities=20% Similarity=0.219 Sum_probs=566.5
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccc------cCCcchhhHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP------VNPASTWGPLIFIFAVSATKE 84 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~------~~~~~~~~~l~~i~~i~~~~~ 84 (1104)
+|+++||+|+++.++. ++| +.+++||++++++.++++++++++..... ...+...+.++++++++++.+
T Consensus 53 ~rl~~~G~N~l~~~~~~~~~----~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~ 128 (903)
T PRK15122 53 ERLQRYGPNEVAHEKPPHAL----VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLR 128 (903)
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHH
Confidence 5889999999998775 455 88999999999988888888888753211 011223344556667888899
Q ss_pred HHHHHHHhhh---hHhhcceEEEEEECC------eEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEecc
Q 001304 85 AWDDYNRYLS---DKKANEKEVWVVKQG------IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAA 155 (1104)
Q Consensus 85 ~~~d~~~~~~---~~~~n~~~~~V~r~g------~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~ 155 (1104)
+++++++.++ .+++.+.+++|+||| ++++|+++||+|||+|.|++||+|||||+|+++++ +.||||+
T Consensus 129 ~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDES~ 204 (903)
T PRK15122 129 FWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQAV 204 (903)
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEccc
Confidence 9999998764 456677899999994 79999999999999999999999999999997655 8999999
Q ss_pred CCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEE
Q 001304 156 LDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWAC 235 (1104)
Q Consensus 156 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~ 235 (1104)
|||||.|+.|.+.... +. .+.. +...+++....+.+|++|+||.+.+| .+.
T Consensus 205 LTGES~PV~K~~~~~~--------------~~--~~~~------------~~~~~~~~~~~~~~n~vfaGT~V~~G-~~~ 255 (903)
T PRK15122 205 LTGEALPVEKYDTLGA--------------VA--GKSA------------DALADDEGSLLDLPNICFMGTNVVSG-TAT 255 (903)
T ss_pred cCCCCcceeeeccccc--------------cc--cccc------------cccccccCCcccccceEEeCCEEEee-eEE
Confidence 9999999999641100 00 0000 00001111223678999999999998 699
Q ss_pred EEEEEecCccccccccCCC--CCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhh
Q 001304 236 GVAVYTGNETKLGMTRGIP--EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELL 313 (1104)
Q Consensus 236 gvVv~tG~~T~~~~~~~~~--~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1104)
++|++||.+|.+|++.+.. +...+++++.++++...+..+.++++.+..+++.+. ..+|.+.+
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~---------------~~~~~~~l 320 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT---------------KGDWLEAL 320 (903)
T ss_pred EEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc---------------cCCHHHHH
Confidence 9999999999999876522 445689999999988877666555544443332111 11344555
Q ss_pred hhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEE
Q 001304 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (1104)
Q Consensus 314 ~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 393 (1104)
..++ .+++.++|++||+.+.++....+. +|.++ ++++|+++++|+||++++||||||||||+|+|++
T Consensus 321 ~~ai---sl~V~~~Pe~Lp~~vt~~La~g~~------~mak~----~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V 387 (903)
T PRK15122 321 LFAL---AVAVGLTPEMLPMIVSSNLAKGAI------AMARR----KVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIIL 387 (903)
T ss_pred HHHH---HHHHHHccchHHHHHHHHHHHHHH------HHHHc----CCeecccchhhhhcCCcEEEecCCcccccCeEEE
Confidence 4443 367889999998666555554443 45544 4899999999999999999999999999999999
Q ss_pred EEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEE
Q 001304 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
.+++..+. . . + .+++...++| +.. +. ..+||.|.|+++++.+.+...
T Consensus 388 ~~~~~~~~-------~--~-----------~---~~~l~~a~l~-s~~----~~-----~~~~p~e~All~~a~~~~~~~ 434 (903)
T PRK15122 388 EHHLDVSG-------R--K-----------D---ERVLQLAWLN-SFH----QS-----GMKNLMDQAVVAFAEGNPEIV 434 (903)
T ss_pred EEEEcCCC-------C--C-----------h---HHHHHHHHHh-CCC----CC-----CCCChHHHHHHHHHHHcCchh
Confidence 98652110 0 0 0 1223333333 111 11 157999999999998766421
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC----C-------chhH
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q-------QTRT 542 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~----~-------~~~~ 542 (1104)
....|+.++.+||+|.||+|+++++.. +|++++++|||||.|+++|..- . ..++
T Consensus 435 --------------~~~~~~~~~~~pF~s~~k~ms~v~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~ 499 (903)
T PRK15122 435 --------------KPAGYRKVDELPFDFVRRRLSVVVEDA-QGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRER 499 (903)
T ss_pred --------------hhhcCceEEEeeeCCCcCEEEEEEEcC-CCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHH
Confidence 123467788999999999999999875 5788999999999999999631 1 1245
Q ss_pred HHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHH
Q 001304 543 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETI 622 (1104)
Q Consensus 543 ~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I 622 (1104)
+.+.+++++.+|+|++++|||.++.++..++ ..+..|+|++|+|+++++||+|++++++|
T Consensus 500 i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI 559 (903)
T PRK15122 500 LLALAEAYNADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGFLTFLDPPKESAAPAI 559 (903)
T ss_pred HHHHHHHHHhCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEEEeccCccHHHHHHHH
Confidence 6778899999999999999999865432110 01235789999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhH
Q 001304 623 ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (1104)
Q Consensus 623 ~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 702 (1104)
++|+++||+++|+|||++.||.++|+++||... . +++|..+
T Consensus 560 ~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~--~-------------------------------------vi~G~el 600 (903)
T PRK15122 560 AALRENGVAVKVLTGDNPIVTAKICREVGLEPG--E-------------------------------------PLLGTEI 600 (903)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--C-------------------------------------ccchHhh
Confidence 999999999999999999999999999999421 1 1233333
Q ss_pred HHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-hhc
Q 001304 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAA 781 (1104)
Q Consensus 703 ~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~A 781 (1104)
+.+.++ .+.+ ...+..+|||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| | .|++++ ++|
T Consensus 601 ~~~~~~---el~~--~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm-g-~gtdvAkeaA 673 (903)
T PRK15122 601 EAMDDA---ALAR--EVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV-D-SGADIAKESA 673 (903)
T ss_pred hhCCHH---HHHH--HhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe-C-cccHHHHHhc
Confidence 322111 1111 1245679999999999999999999999999999999999999999999999 6 455554 599
Q ss_pred ceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhh
Q 001304 782 DYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVST 860 (1104)
Q Consensus 782 D~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~ 860 (1104)
|+||+++++-... .+.+||.+|+|+++++.|.+..|+...+..++..++ .+..++.+.|++|.|+++|. |+++++
T Consensus 674 DiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~---~~~~pl~~~qil~~nli~D~-~~lal~ 749 (903)
T PRK15122 674 DIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAF---IPFLPMLAIHLLLQNLMYDI-SQLSLP 749 (903)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hccchhHHHHHHHHHHHHHH-HHHhhc
Confidence 9999988876555 468999999999999999988887655444433332 23357899999999999995 888888
Q ss_pred ccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeeccccc----ceeeeehhhhHHHHHHH
Q 001304 861 IDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSE----MEEVSMVALSGCIWLQA 936 (1104)
Q Consensus 861 ~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 936 (1104)
+| ++++++| +||+ .++.++++..+++.-. .+.+.++..|++.++.+...... .++..|..+..+.+++.
T Consensus 750 ~d--~~~~~~m-~~P~---~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~q~~~~ 822 (903)
T PRK15122 750 WD--KMDKEFL-RKPR---KWDAKNIGRFMLWIGP-TSSIFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLVV 822 (903)
T ss_pred CC--CCCHhhc-CCCC---CCChhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccCcHhhhhhhHHHHHHHHHHHHHHHH
Confidence 88 5888889 6662 4555566554432111 22223333333322222111101 11222333444444455
Q ss_pred HhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHH
Q 001304 937 FVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALK 1008 (1104)
Q Consensus 937 ~~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k 1008 (1104)
|++|..... ++.+...+..+++.++++++..++|+.. +..++++.. ++.+|++++.+.++.++...+.|
T Consensus 823 ~~~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k 892 (903)
T PRK15122 823 HMLRTQKIP--FIQSTAALPVLLTTGLIMAIGIYIPFSP-LGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMK 892 (903)
T ss_pred HhhCcCCCC--cCcchHHHHHHHHHHHHHHHHHHhhHHH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 556654322 2223334444445555566666777511 124455544 77888887777766666666666
No 15
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.2e-99 Score=949.00 Aligned_cols=772 Identities=19% Similarity=0.238 Sum_probs=555.5
Q ss_pred ccccCCCCceeecCCCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~-~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~ 90 (1104)
+|+++||+|+++.++.+ +| +.|++||+++++++++++++++++.. .+...+.++++++++.+.++++++|
T Consensus 75 ~r~~~~G~N~l~~~~~~s~~----~~~~~~~~~p~~~lL~~aa~ls~~~~-----~~~~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 75 SAREQHGENELPAQKPLPWW----VHLWVCYRNPFNILLTILGAISYATE-----DLFAAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHc-----cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999998875 55 88999999999988888888887643 2333345556777888999999999
Q ss_pred Hhhh---hHhhcceEEEEEEC------CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCC
Q 001304 91 RYLS---DKKANEKEVWVVKQ------GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETD 161 (1104)
Q Consensus 91 ~~~~---~~~~n~~~~~V~r~------g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~ 161 (1104)
+.++ .+++.+.+++|+|| |++++|+++||||||||.|++||.|||||+|+++++ +.||||+|||||.
T Consensus 146 a~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES~ 221 (902)
T PRK10517 146 STKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGESL 221 (902)
T ss_pred HHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCCC
Confidence 8764 56667889999999 789999999999999999999999999999997655 8999999999999
Q ss_pred ceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEe
Q 001304 162 LKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241 (1104)
Q Consensus 162 ~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~t 241 (1104)
|+.|.+... .+.+..+.+.+|++|+||.+.+| .+.++|++|
T Consensus 222 PV~K~~~~~--------------------------------------~~~~~~~~~~~n~vfaGT~V~~G-~~~~vV~at 262 (902)
T PRK10517 222 PVEKFATTR--------------------------------------QPEHSNPLECDTLCFMGTNVVSG-TAQAVVIAT 262 (902)
T ss_pred ceecccccc--------------------------------------cccccCccccccceeeCceEeee-eEEEEEEEe
Confidence 999965311 01112234678999999999998 699999999
Q ss_pred cCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHH
Q 001304 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLR 318 (1104)
Q Consensus 242 G~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (1104)
|.+|.+|++.. ..+.+++++++.+++++..+..++++++.++.+++.+. ..+|...+..+++
T Consensus 263 G~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~---------------~~~~~~~l~~als 327 (902)
T PRK10517 263 GANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT---------------KGDWWEAALFALS 327 (902)
T ss_pred ccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---------------cCCHHHHHHHHHH
Confidence 99999998764 34567899999999998887776666655544432111 1134455544443
Q ss_pred HHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEE
Q 001304 319 FELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCI 398 (1104)
Q Consensus 319 ~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~ 398 (1104)
+++.++|++||+.+.++....+. +|.++ ++++|+++.+|+||++|+||||||||||+|+|++.++..
T Consensus 328 ---v~V~~~Pe~LP~~vt~~la~g~~------~mak~----~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~ 394 (902)
T PRK10517 328 ---VAVGLTPEMLPMIVTSTLARGAV------KLSKQ----KVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD 394 (902)
T ss_pred ---HHHHHcccHHHHHHHHHHHHHHH------HHHhC----CcEEecchhhhhccCCCEEEecCCCccccceEEEEEEec
Confidence 67789999998766555555444 45544 389999999999999999999999999999999987531
Q ss_pred ecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecC
Q 001304 399 GGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 478 (1104)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~ 478 (1104)
. .+. ...+++...++|.... . ..+||.|.|+++++...+.
T Consensus 395 ~---~~~--------------------~~~~ll~~a~l~~~~~-----~-----~~~~p~d~All~~a~~~~~------- 434 (902)
T PRK10517 395 I---SGK--------------------TSERVLHSAWLNSHYQ-----T-----GLKNLLDTAVLEGVDEESA------- 434 (902)
T ss_pred C---CCC--------------------CHHHHHHHHHhcCCcC-----C-----CCCCHHHHHHHHHHHhcch-------
Confidence 0 000 0123344444443211 1 1479999999999865321
Q ss_pred cEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc----CC-------chhHHHHHH
Q 001304 479 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA----GQ-------QTRTFVEAV 547 (1104)
Q Consensus 479 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~----~~-------~~~~~~~~~ 547 (1104)
......|+.++.+||||+||||+++++.. ++.+.+++|||||.|+++|.. +. ..+++.+..
T Consensus 435 -------~~~~~~~~~~~~~pFds~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~ 506 (902)
T PRK10517 435 -------RSLASRWQKIDEIPFDFERRRMSVVVAEN-TEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVT 506 (902)
T ss_pred -------hhhhhcCceEEEeeeCCCcceEEEEEEEC-CCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHH
Confidence 01123567788999999999999999865 566789999999999999963 11 124567778
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
++++++|+||+++|||+++.++. .+ ....|+|++|+|+++++||+|++++++|++|++
T Consensus 507 ~~~a~~G~rvlavA~k~~~~~~~-~~---------------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~ 564 (902)
T PRK10517 507 DTLNRQGLRVVAVATKYLPAREG-DY---------------------QRADESDLILEGYIAFLDPPKETTAPALKALKA 564 (902)
T ss_pred HHHHhcCCEEEEEEEecCCcccc-cc---------------------ccccccCceeeehHhhhCcchhhHHHHHHHHHH
Confidence 89999999999999998865321 00 011368999999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHH
Q 001304 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (1104)
Q Consensus 628 aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 707 (1104)
+||+|+|+|||++.||.++|+++||... . +++|..++...+
T Consensus 565 aGI~v~miTGD~~~tA~~IA~~lGI~~~--~-------------------------------------v~~G~el~~l~~ 605 (902)
T PRK10517 565 SGVTVKILTGDSELVAAKVCHEVGLDAG--E-------------------------------------VLIGSDIETLSD 605 (902)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCCcc--C-------------------------------------ceeHHHHHhCCH
Confidence 9999999999999999999999999421 1 223333332211
Q ss_pred HHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHH-Hhhhcceecc
Q 001304 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ-AARAADYSIG 786 (1104)
Q Consensus 708 ~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~-a~~~AD~vl~ 786 (1104)
+ .+.+ ...+..+|+|++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| | +|++ |+++||++|+
T Consensus 606 ~---el~~--~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm-g-~gtdvAkeaADiVLl 678 (902)
T PRK10517 606 D---ELAN--LAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV-D-GAVDIAREAADIILL 678 (902)
T ss_pred H---HHHH--HHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe-C-CcCHHHHHhCCEEEe
Confidence 1 1111 1234679999999999999999999999999999999999999999999999 6 4555 5559999999
Q ss_pred cchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCC
Q 001304 787 KFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDL 865 (1104)
Q Consensus 787 ~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~ 865 (1104)
++++.... .+.+||.+|+|+++++.|.+..|+...+..++..++. +..|+.+.|++|.|+++| +|.+++++| +
T Consensus 679 dd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D-~~~~al~~d--~ 752 (902)
T PRK10517 679 EKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD-VSQVAIPFD--N 752 (902)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH-HhHHhhcCC--C
Confidence 98876554 4689999999999999999988886655554444332 225789999999999999 788888888 5
Q ss_pred CchhhccCCccccccccCcccCchhhHH-HHHHHHHHHH---HHHHHhhheeeccccccee-eeehhhhHHHHHH---HH
Q 001304 866 SEGTVMQHPQILFYCQAGRLLNPSTFAG-WFGRSLFHAI---VAFVISIHVYAYEKSEMEE-VSMVALSGCIWLQ---AF 937 (1104)
Q Consensus 866 ~~~~~~~~p~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~ 937 (1104)
+++.+|++||+|.. ..+.. .+..+++.++ ..|++.++.+........+ +.+..|...++.+ .+
T Consensus 753 ~~~~~m~~p~r~~~---------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~ 823 (902)
T PRK10517 753 VDDEQIQKPQRWNP---------ADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVH 823 (902)
T ss_pred CChhhhcCCCCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHH
Confidence 88889999996432 22222 2223444332 2222222222211110001 1112254555544 44
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-C--HHHHHHHHHHH
Q 001304 938 VVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-Q--PSYWITMFLIV 997 (1104)
Q Consensus 938 ~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~--~~~w~~ill~~ 997 (1104)
++|.... .++.+...|..+++.++++++..++|.... ..++++.. + ...|+.++++.
T Consensus 824 ~~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~l~~~~~~~~~~~~~~ 883 (902)
T PRK10517 824 MIRTRRI--PFIQSRAAWPLMIMTLIVMAVGIALPFSPL-ASYLQLQALPLSYFPWLVAILAG 883 (902)
T ss_pred hhccCCC--CcccchHHHHHHHHHHHHHHHHHHhhHHHH-HHhhCCcCCChhHHHHHHHHHHH
Confidence 5554332 233445566666666666666667773221 13444433 3 34555444433
No 16
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.2e-97 Score=932.69 Aligned_cols=751 Identities=18% Similarity=0.208 Sum_probs=544.7
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~ 90 (1104)
+|+++||+|+++.++. ++| +.+++||+++++++++++++++++.. .+...+.++++++++++.++++++|
T Consensus 41 ~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~p~~~iL~~~a~ls~~~~-----~~~~~~iI~~iv~~~~~i~~~~e~~ 111 (867)
T TIGR01524 41 ERLAEFGPNQTVEEKKVPNL----RLLIRAFNNPFIYILAMLMGVSYLTD-----DLEATVIIALMVLASGLLGFIQESR 111 (867)
T ss_pred HHHHhcCCCcCCCCCCCCHH----HHHHHHHhhHHHHHHHHHHHHHHHHh-----hHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 5889999999999876 455 88999999999988888888887642 2333344556667788889999998
Q ss_pred Hhhh---hHhhcceEEEEEE------CCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCC
Q 001304 91 RYLS---DKKANEKEVWVVK------QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETD 161 (1104)
Q Consensus 91 ~~~~---~~~~n~~~~~V~r------~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~ 161 (1104)
..++ .+++.+.+++|+| ||++++|+++||||||||.|++||+|||||+|+++++ +.||||+|||||.
T Consensus 112 a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~ 187 (867)
T TIGR01524 112 AERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESL 187 (867)
T ss_pred HHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCC
Confidence 8654 4666778999999 9999999999999999999999999999999997655 8999999999999
Q ss_pred ceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEe
Q 001304 162 LKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241 (1104)
Q Consensus 162 ~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~t 241 (1104)
|+.|.+.... ..+....+.+|++|+||.+.+| .+.++|++|
T Consensus 188 PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~v~~G-~~~~~V~~t 228 (867)
T TIGR01524 188 PVEKFVEDKR--------------------------------------ARDPEILERENLCFMGTNVLSG-HAQAVVLAT 228 (867)
T ss_pred cccccCCccc--------------------------------------cccccccccccceecCCeEEEe-EEEEEEEEE
Confidence 9999653100 0111123678999999999998 699999999
Q ss_pred cCccccccccCC--CCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHH
Q 001304 242 GNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRF 319 (1104)
Q Consensus 242 G~~T~~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1104)
|.+|.+|++... .+.+++++++.+++++.++..+.++++++.++++.+. ..+|...+..++
T Consensus 229 G~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~al-- 291 (867)
T TIGR01524 229 GSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM---------------KGDWLEAFLFAL-- 291 (867)
T ss_pred cCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh---------------cCCHHHHHHHHH--
Confidence 999999987542 2455689999999999888777766665544432111 113444444443
Q ss_pred HHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEe
Q 001304 320 ELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIG 399 (1104)
Q Consensus 320 ~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~ 399 (1104)
.+++.++|++||+.+.++....+. +|.++ ++++|+++.+|+||++++||||||||||+|+|++.+++..
T Consensus 292 -~l~v~~iP~~Lp~~vt~~la~g~~------~mak~----~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~ 360 (867)
T TIGR01524 292 -AVAVGLTPEMLPMIVSSNLAKGAI------NMSKK----KVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDS 360 (867)
T ss_pred -HHHHHhCcchHHHHHHHHHHHHHH------HHHhC----CcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecC
Confidence 367789999998766665555544 45544 4899999999999999999999999999999999886411
Q ss_pred cEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCc
Q 001304 400 GIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNAS 479 (1104)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~ 479 (1104)
. + ....+++...++|+... ...+||.|.|+++++.+.+..
T Consensus 361 ~-------~----------------~~~~~~l~~a~l~~~~~----------~~~~~p~~~Al~~~~~~~~~~------- 400 (867)
T TIGR01524 361 S-------G----------------ETSERVLKMAWLNSYFQ----------TGWKNVLDHAVLAKLDESAAR------- 400 (867)
T ss_pred C-------C----------------CCHHHHHHHHHHhCCCC----------CCCCChHHHHHHHHHHhhchh-------
Confidence 0 0 00122333334433211 114699999999998753210
Q ss_pred EEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC-----------CchhHHHHHHH
Q 001304 480 ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVE 548 (1104)
Q Consensus 480 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~-----------~~~~~~~~~~~ 548 (1104)
.....++.++.+||||+||+|++++++. ++.+.+++|||||.++++|+.. +..+++.+.++
T Consensus 401 -------~~~~~~~~~~~~pF~s~~k~ms~~v~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~ 472 (867)
T TIGR01524 401 -------QTASRWKKVDEIPFDFDRRRLSVVVENR-AEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTA 472 (867)
T ss_pred -------hHhhcCceEEEeccCCCcCEEEEEEEcC-CceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHH
Confidence 1123567788899999999999999864 3467899999999999999631 11346778889
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHc
Q 001304 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (1104)
Q Consensus 549 ~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~a 628 (1104)
+++++|+|++++|||+++.++.. + .+..|+||+|+|+++++||+|++++++|++|+++
T Consensus 473 ~~a~~G~rvlavA~~~~~~~~~~-~---------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~a 530 (867)
T TIGR01524 473 EMNRQGIRVIAVATKTLKVGEAD-F---------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKN 530 (867)
T ss_pred HHHhcCCEEEEEEEeccCccccc-c---------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHC
Confidence 99999999999999998654310 0 0123689999999999999999999999999999
Q ss_pred CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHH
Q 001304 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (1104)
Q Consensus 629 GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~ 708 (1104)
||+++|+|||+..||.++|+++||...+ .+.|. .++...+
T Consensus 531 GI~vvmiTGD~~~tA~aIA~~lGI~~~~------v~~g~---------------------------------~l~~~~~- 570 (867)
T TIGR01524 531 GINVKVLTGDNEIVTARICQEVGIDAND------FLLGA---------------------------------DIEELSD- 570 (867)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCCCC------eeecH---------------------------------hhhhCCH-
Confidence 9999999999999999999999995321 12222 2222111
Q ss_pred HHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-hhcceeccc
Q 001304 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADYSIGK 787 (1104)
Q Consensus 709 ~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~AD~vl~~ 787 (1104)
+.+.+ ...+..+|+|++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| | +|++++ ++||++|++
T Consensus 571 --~el~~--~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm-g-~gtdvAk~aADiVLld 644 (867)
T TIGR01524 571 --EELAR--ELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV-D-TAADIAKEASDIILLE 644 (867)
T ss_pred --HHHHH--HhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe-C-CccHHHHHhCCEEEec
Confidence 11111 1345689999999999999999999999999999999999999999999999 6 455554 599999998
Q ss_pred chhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCC
Q 001304 788 FRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLS 866 (1104)
Q Consensus 788 f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~ 866 (1104)
+++-... .+.+||.+|+|+++.+.|.+..|+...+..++..++ .+..|+.+.|++|+|+++| +|++++++| ++
T Consensus 645 d~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~---~~~~pl~~~qil~inl~~d-~~~~al~~~--~~ 718 (867)
T TIGR01524 645 KSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF---IPFLPMLSLHLLIQNLLYD-FSQLTLPWD--KM 718 (867)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHH-HHHHhhcCC--CC
Confidence 8875554 468999999999999999988887655544443332 2235789999999999999 799998888 58
Q ss_pred chhhccCCccccccccCcccCchhhHHHHHHHHHHHH---HHHHHhhheeeccccc----ceeeeehhhhHHHHHHHHhh
Q 001304 867 EGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAI---VAFVISIHVYAYEKSE----MEEVSMVALSGCIWLQAFVV 939 (1104)
Q Consensus 867 ~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 939 (1104)
++.+|++|+.+.. + .....++..|++.++ ..|++.+..+...... .++..|..+..+.+++.|++
T Consensus 719 ~~~~m~~p~~~~~----~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~ 790 (867)
T TIGR01524 719 DREFLKKPHQWEQ----K----GMGRFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMI 790 (867)
T ss_pred ChHhhCCCCCCCh----h----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8889998874321 1 111122234443332 2222222222111000 12222333334444445555
Q ss_pred hhccccchHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 001304 940 ALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSS 974 (1104)
Q Consensus 940 ~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp~~ 974 (1104)
|.... ..+.+...+..+++.++++++..++|+.
T Consensus 791 R~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~p~~ 823 (867)
T TIGR01524 791 RTEKI--PFIQSRAAAPVMIATLLVMALGIIIPFS 823 (867)
T ss_pred CcCCC--CcCcchHHHHHHHHHHHHHHHHHHhchh
Confidence 55432 2234555666666666666667777763
No 17
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=3.7e-93 Score=881.55 Aligned_cols=631 Identities=21% Similarity=0.228 Sum_probs=494.1
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~ 91 (1104)
+|+++||+|+++..+.+.| +.|++||.+++++.+++.++++++.+ .+...+.+++++++++..+++++++.
T Consensus 9 ~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~~-----~~~~~~~i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 9 KRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIALE-----NWVDFVIILGLLLLNATIGFIEENKA 79 (755)
T ss_pred HHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhhc-----chhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 5889999999998666654 78899999999988888888887653 22233445566677888899999998
Q ss_pred hhhh---HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecc
Q 001304 92 YLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1104)
Q Consensus 92 ~~~~---~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1104)
.++. +++.+.+++|+|||++++|+++||+|||||.|++||+|||||+|+++++ +.||||+|||||.|+.|
T Consensus 80 ~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K--- 152 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTK--- 152 (755)
T ss_pred HHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEe---
Confidence 7654 5567889999999999999999999999999999999999999996544 99999999999999999
Q ss_pred ccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccc
Q 001304 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248 (1104)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~ 248 (1104)
..+|.+|+||.+.+| .+.++|++||.+|.+|
T Consensus 153 ------------------------------------------------~~~~~v~aGT~v~~G-~~~~~V~~tG~~T~~g 183 (755)
T TIGR01647 153 ------------------------------------------------KTGDIAYSGSTVKQG-EAEAVVTATGMNTFFG 183 (755)
T ss_pred ------------------------------------------------ccCCeeeccCEEEcc-EEEEEEEEcCCccHHH
Confidence 345789999999998 6999999999999999
Q ss_pred cccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhc
Q 001304 249 MTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSI 325 (1104)
Q Consensus 249 ~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (1104)
++.+ ..+..++++++.+++++.++.++.++++++.+++++... ..++...+..++ .+++.
T Consensus 184 ~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~i---~vlv~ 246 (755)
T TIGR01647 184 KAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR--------------GESFREGLQFAL---VLLVG 246 (755)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------CCCHHHHHHHHH---HHHHH
Confidence 8654 445567899999999998887777666665554432211 123444444333 37788
Q ss_pred cccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecC
Q 001304 326 MIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 405 (1104)
Q Consensus 326 ~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 405 (1104)
++|++|++.+.++....+. +|.++ ++++|+++.+|+||++++||||||||||+|+|++.+++..+..+
T Consensus 247 a~P~~Lp~~~~~~la~g~~------r~ak~----gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~-- 314 (755)
T TIGR01647 247 GIPIAMPAVLSVTMAVGAA------ELAKK----KAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF-- 314 (755)
T ss_pred hCCcchHHHHHHHHHHHHH------HHHhC----CeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC--
Confidence 9999998766666555544 55544 48999999999999999999999999999999999987542100
Q ss_pred CCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEe
Q 001304 406 ETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485 (1104)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 485 (1104)
+..+++...++|+.. ..+||.|.|+++++++.+.
T Consensus 315 --------------------~~~~~l~~a~~~~~~------------~~~~pi~~Ai~~~~~~~~~-------------- 348 (755)
T TIGR01647 315 --------------------DKDDVLLYAALASRE------------EDQDAIDTAVLGSAKDLKE-------------- 348 (755)
T ss_pred --------------------CHHHHHHHHHHhCCC------------CCCChHHHHHHHHHHHhHH--------------
Confidence 011344455555421 1479999999998876431
Q ss_pred CCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC-chhHHHHHHHHHHhccceEEEEEEEe
Q 001304 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-QTRTFVEAVEQYSQLGLRTLCLAWRE 564 (1104)
Q Consensus 486 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~-~~~~~~~~~~~~a~~GlR~l~~A~k~ 564 (1104)
....|++++.+||++.+|+|+++++.+.+|+.++++|||||.++++|+... .++++.+.+++++.+|+|++++|||+
T Consensus 349 --~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~ 426 (755)
T TIGR01647 349 --ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD 426 (755)
T ss_pred --HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc
Confidence 123467788999999999999999876557788899999999999997532 34567888999999999999999972
Q ss_pred cCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH
Q 001304 565 VEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI 644 (1104)
Q Consensus 565 l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~ 644 (1104)
. |++|+|+|+++++||+|++++++|++|+++||+++|+|||++.||.
T Consensus 427 ~---------------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 473 (755)
T TIGR01647 427 E---------------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAK 473 (755)
T ss_pred C---------------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 1 3789999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhcccee
Q 001304 645 QIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 724 (1104)
Q Consensus 645 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i 724 (1104)
++|+++||..+.. .+. ++ .+|+.++...+ +.+.+ ...+..+
T Consensus 474 ~IA~~lGI~~~~~-------~~~---~l------------------------~~~~~~~~~~~---~~~~~--~~~~~~v 514 (755)
T TIGR01647 474 ETARRLGLGTNIY-------TAD---VL------------------------LKGDNRDDLPS---GELGE--MVEDADG 514 (755)
T ss_pred HHHHHcCCCCCCc-------CHH---Hh------------------------cCCcchhhCCH---HHHHH--HHHhCCE
Confidence 9999999954210 000 00 00111000000 01111 1234679
Q ss_pred eeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-hhcceecccchhhHHH-HHhhhhhh
Q 001304 725 CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADYSIGKFRFLKRL-ILVHGRYS 802 (1104)
Q Consensus 725 ~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~AD~vl~~f~~l~~l-ll~~GR~~ 802 (1104)
|+|++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |+ +++++ ++||++|+++++.... .+.+||.+
T Consensus 515 fAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm-~~-gtdvAkeaADivLl~d~l~~I~~ai~~gR~~ 592 (755)
T TIGR01647 515 FAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV-AG-ATDAARSAADIVLTEPGLSVIVDAILESRKI 592 (755)
T ss_pred EEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe-cC-CcHHHHHhCCEEEEcCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 64 45554 5999999998886555 46899999
Q ss_pred hhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccC
Q 001304 803 YNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDK 863 (1104)
Q Consensus 803 ~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~ 863 (1104)
|+|+++.+.|.+..|+...+..++..++.+ .+ ++++|++|.|++++. |.+++++|+
T Consensus 593 ~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~---~~-l~~~~il~~~l~~d~-~~~~l~~~~ 648 (755)
T TIGR01647 593 FQRMKSYVIYRIAETIRIVFFFGLLILILN---FY-FPPIMVVIIAILNDG-TIMTIAYDN 648 (755)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhC---cc-hhHHHHHHHHHHHhH-hHhhccCCC
Confidence 999999999999998876554444333323 23 899999999999996 688888986
No 18
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-94 Score=820.02 Aligned_cols=868 Identities=20% Similarity=0.231 Sum_probs=648.1
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--------CCcchhhHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPV--------NPASTWGPLIFIFAVSATK 83 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~--------~~~~~~~~l~~i~~i~~~~ 83 (1104)
+++.+-|+|.++.+|.+.- +..+.+|+...+.+.+++.++++++...... +....-+.|..++.++.+.
T Consensus 66 ~~L~rdG~NaL~Ppk~t~~---wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~ 142 (1019)
T KOG0203|consen 66 EKLARDGPNALTPPKTTPE---WIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLF 142 (1019)
T ss_pred hhhccCCCCCCCCCCCChH---HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecC
Confidence 4677899999999887541 2668899999988888888888776432111 1111224455566667777
Q ss_pred HHHHHHHHh---hhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCC
Q 001304 84 EAWDDYNRY---LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1104)
Q Consensus 84 ~~~~d~~~~---~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs 160 (1104)
.++|+.+.. .+.+.+.+..|+|+|||....+..+++||||+|.++-||+||||++++++.+ |+||+|+|||||
T Consensus 143 ~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGes 218 (1019)
T KOG0203|consen 143 SYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGES 218 (1019)
T ss_pred CCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccccc
Confidence 788877653 4678888999999999999999999999999999999999999999999998 999999999999
Q ss_pred CceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEE
Q 001304 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240 (1104)
Q Consensus 161 ~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~ 240 (1104)
+|..+.+.. .+..|+...|+.+.+|.+..| .++|+|++
T Consensus 219 EP~~~~~~~-----------------------------------------t~~~~~Et~Ni~f~st~~veG-~~~givi~ 256 (1019)
T KOG0203|consen 219 EPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TGRGIVIA 256 (1019)
T ss_pred CCccCCccc-----------------------------------------cccCchhheeeeeeeeEEecc-eEEEEEEe
Confidence 999885431 223346889999999999998 69999999
Q ss_pred ecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHH
Q 001304 241 TGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL 317 (1104)
Q Consensus 241 tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (1104)
||.+|.+|+++. .....++++++++++++.++..+++++.+.+++++.... ..|...+..
T Consensus 257 tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g---------------y~~l~avv~-- 319 (1019)
T KOG0203|consen 257 TGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG---------------YEWLRAVVF-- 319 (1019)
T ss_pred cCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc---------------chhHHHhhh--
Confidence 999999999876 456788999999999998888877776666655443221 133444433
Q ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEE
Q 001304 318 RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCC 397 (1104)
Q Consensus 318 ~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~ 397 (1104)
++.++++.+|++|+++++.....-++ +|.+.+ |++||+.++|+||+.++||+|||||||+|+|+|.++|
T Consensus 320 -~i~iivAnvPeGL~~tvTv~Ltltak------rMa~Kn----c~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw 388 (1019)
T KOG0203|consen 320 -LIGIIVANVPEGLLATVTVCLTLTAK------RMARKN----CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLW 388 (1019)
T ss_pred -hheeEEecCcCCccceehhhHHHHHH------HHhhce----eEEeeeeheeecccceeEeecceeeEEecceEEEeec
Confidence 34477889999999887777777666 565544 9999999999999999999999999999999999999
Q ss_pred EecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceee---ecCCccHHHHHHHHHhcCcEEE
Q 001304 398 IGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILY---KAQSQDEEALVHAAAQLHMVLV 474 (1104)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~---~~~~p~e~Al~~~a~~~g~~~~ 474 (1104)
.++.....+..+... -+.....++....+.++..+||.+.....+++.... ..|++.|.||++++.-.--.
T Consensus 389 ~d~~i~~~d~~~~~~----~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~-- 462 (1019)
T KOG0203|consen 389 FDNQIHEADTTEDQS----GQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGS-- 462 (1019)
T ss_pred cCCceeeeechhhhh----cccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcch--
Confidence 988765443221110 111122356788899999999999877665554332 27999999999998643211
Q ss_pred eecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeC--CCCcEEEEecChHHhhhhhhcc----C-------Cchh
Q 001304 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHA----G-------QQTR 541 (1104)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~--~~~~~~l~~KGa~e~i~~~~~~----~-------~~~~ 541 (1104)
+..-++.++.+..+||+|.+|+.-.+.+.. .+.++.+.+|||||.++++|+. + +..+
T Consensus 463 ----------~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~ 532 (1019)
T KOG0203|consen 463 ----------VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKE 532 (1019)
T ss_pred ----------HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHH
Confidence 123356677888999999999998888754 2357899999999999999973 1 1135
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHH
Q 001304 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPET 621 (1104)
Q Consensus 542 ~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~ 621 (1104)
.+.+...++...|-||+.||++.++++++++...-.- ... ..--.+|.|+|++++-||+|..+|++
T Consensus 533 ~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~---d~~-----------n~p~~nl~FlGl~s~idPPR~~vP~A 598 (1019)
T KOG0203|consen 533 AFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT---DDV-----------NFPTDNLRFLGLISMIDPPRAAVPDA 598 (1019)
T ss_pred HHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec---CCC-----------CCcchhccccchhhccCCCcccCchh
Confidence 6788889999999999999999999877654321000 000 11235899999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchh
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 701 (1104)
+..|+.|||||.|+|||++.||.++|++.||+..... ..++..+ .....-...+.....+.|+.|.+
T Consensus 599 v~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~e---------t~e~~a~----r~~~~v~~vn~~~a~a~VihG~e 665 (1019)
T KOG0203|consen 599 VGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSE---------TVEDIAK----RLNIPVEQVNSRDAKAAVIHGSE 665 (1019)
T ss_pred hhhhhhhCceEEEEecCccchhhhhhhheeeecCCch---------hhhhhHH----hcCCcccccCccccceEEEeccc
Confidence 9999999999999999999999999999998776542 1111111 11000011223345788999998
Q ss_pred HHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-h
Q 001304 702 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-A 780 (1104)
Q Consensus 702 l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~ 780 (1104)
|..+.++. +.++.......||||.||+||..||+..|+.|.+|+.+|||+||+||||.||||||| |-+|+++++ +
T Consensus 666 L~~~~~~q---ld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM-GiaGSDvsKqA 741 (1019)
T KOG0203|consen 666 LPDMSSEQ---LDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDVSKQA 741 (1019)
T ss_pred ccccCHHH---HHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee-ccccchHHHhh
Confidence 87665432 223333445689999999999999999999999999999999999999999999999 877877776 8
Q ss_pred cceecccchhhHHHH-HhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchh-hhHHHHHHHHHHhhhhhhhh
Q 001304 781 ADYSIGKFRFLKRLI-LVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSL-FNSVSLMAYNVFYTSIPVLV 858 (1104)
Q Consensus 781 AD~vl~~f~~l~~ll-l~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~-~~~~~ll~~nl~~~~lp~~~ 858 (1104)
||++|+|++|.+.+- +.+||.+|+|++|.|.|.+..|+-=..+-++|. +.|.|+ +..+++|.+.+.+|.+|++.
T Consensus 742 ADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi----~~giPLplgtitIL~IDLgTDmvPAiS 817 (1019)
T KOG0203|consen 742 ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI----LFGIPLPLGTVTILCIDLGTDIVPAIS 817 (1019)
T ss_pred cceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH----HhCCCcccchhhhhhhHhhcccchhhh
Confidence 999999999998873 789999999999999999998875443333332 345454 88999999999999999999
Q ss_pred hhccCCCCchhhccCCccccccccCcccCchhhHHHHH-HHHHHHHHHHHHhhheeeccc--------------------
Q 001304 859 STIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYAYEK-------------------- 917 (1104)
Q Consensus 859 ~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~-------------------- 917 (1104)
+++|. +|.++|++||+ ..+.+++.|.+.+....+ -|.+|++.-|+..|..+....
T Consensus 818 LAYE~--aEsDIM~r~PR--~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~D 893 (1019)
T KOG0203|consen 818 LAYEK--AESDIMLRPPR--NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVND 893 (1019)
T ss_pred HhccC--chhhHHhcCCC--CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhh
Confidence 99994 99999999995 457889999998765544 588998887776654442110
Q ss_pred ---ccc---------------eeeeehhhhHHHHHHHHhhhhccccch--HHHHHHHHHHHHHHHHHHHHHhhcCCchhH
Q 001304 918 ---SEM---------------EEVSMVALSGCIWLQAFVVALETNSFT--VFQHLAIWGNLVAFYIINWIFSAIPSSGMY 977 (1104)
Q Consensus 918 ---~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~sii~~~i~~~~~~~vp~~~~~ 977 (1104)
+.+ .+.-+++.+.++|+.++.+-.+.++.. =+.|+.++..++.-.++..++++.|...
T Consensus 894 l~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~-- 971 (1019)
T KOG0203|consen 894 LTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVL-- 971 (1019)
T ss_pred hhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHH--
Confidence 000 122233444455555555433333221 1345555555555556666777888754
Q ss_pred HHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 978 TIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 978 ~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
..+++.+ .+.||++-+-..++.++.+.+-|++-|.|
T Consensus 972 -~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 972 -YALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred -HHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 3455543 66888877766777777778778776654
No 19
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-83 Score=737.41 Aligned_cols=781 Identities=19% Similarity=0.275 Sum_probs=530.4
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~ 91 (1104)
.|+.-||+|.+..+..+.+ ..|+.+--+|+.+|-.+..++ |..- +.+.+..-++++-+.++....+|..+.
T Consensus 168 ~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~l--W~~d---~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 168 DRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVAL--WLAD---SYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred hHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhh--hhcc---cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3778899999999998876 667777666664333333333 2221 112222333444456777888888776
Q ss_pred hhhhHhhcc--eEEEEEECCeEEEEeccCCccceEEEEec-CCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecc
Q 001304 92 YLSDKKANE--KEVWVVKQGIKKLIQSQDIRVGNIVWLRE-NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1104)
Q Consensus 92 ~~~~~~~n~--~~~~V~r~g~~~~i~~~~lvvGDIV~l~~-g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1104)
.+..+++-. ..|+|+|||.+++|.++|||||||+.+.+ +-..|||++|+ +|.|.||||+|||||.|+.|.|.
T Consensus 239 s~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li-----~g~civNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI-----SGDCIVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE-----eCcEEeecccccCCcccccccCC
Confidence 666666643 47999999999999999999999999999 99999999999 78899999999999999999876
Q ss_pred ccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceecc-----CceEEEEEEEecC
Q 001304 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN-----TEWACGVAVYTGN 243 (1104)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~-----~~~~~gvVv~tG~ 243 (1104)
+.-.+. +... .........|++|.||.+.. |+.+.|+|++||.
T Consensus 314 ~~~~~~-------~~~~-------------------------~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF 361 (1140)
T KOG0208|consen 314 PMGTDS-------LDSI-------------------------TISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGF 361 (1140)
T ss_pred cccccc-------CcCe-------------------------eechhhcCcceeeccceEEEeecCCCCceEEEEEeccc
Confidence 410000 0000 00001145789999999843 4578999999999
Q ss_pred ccccccccC-CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHh
Q 001304 244 ETKLGMTRG-IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (1104)
Q Consensus 244 ~T~~~~~~~-~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (1104)
.|.-|++.+ ...+|+.+++-.-+.+..+.++.++.++..+..+..+.. .+.+....+ ++.+.+
T Consensus 362 ~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~-------------~g~~~~~ii---irsLDl 425 (1140)
T KOG0208|consen 362 STTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL-------------LGVPLKTII---IRSLDL 425 (1140)
T ss_pred cccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-------------cCCCHHHHh---hhhhcE
Confidence 999998765 445565655555554433333333222222111111100 112333333 344457
Q ss_pred hhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEE
Q 001304 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (1104)
Q Consensus 323 ~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 402 (1104)
+...+|++||.++++.-...-. ++.+ +++.|-++..+...|+++.+|||||||||++.+.+-.+..-...
T Consensus 426 iTi~VPPALPAaltvG~~~a~~------RLkk----k~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~ 495 (1140)
T KOG0208|consen 426 ITIVVPPALPAALTVGIIYAQS------RLKK----KGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERN 495 (1140)
T ss_pred EEEecCCCchhhhhHHHHHHHH------HHHh----cCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccc
Confidence 8889999998777665443222 3333 35889999999999999999999999999999998877652211
Q ss_pred --ecCCCCcCCCch--hhhh-hhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeec
Q 001304 403 --YGNETGDALKDV--GLLN-AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 477 (1104)
Q Consensus 403 --~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~ 477 (1104)
-+........+. ...+ ..+........+..++|.||+..... |.+ .|||.|.-+.+. .|+.+.+..
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~---g~l---~GDPLdlkmfe~---t~w~~ee~~ 566 (1140)
T KOG0208|consen 496 VDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVD---GTL---VGDPLDLKMFES---TGWVYEEAD 566 (1140)
T ss_pred ccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeC---Cee---ccCceeeeeeec---cceEEEecc
Confidence 000000000000 0000 01111223457889999999877543 322 467776555443 344442211
Q ss_pred C-----------cEEEEEe-----C----CeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC
Q 001304 478 A-----------SILEIKF-----N----GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 537 (1104)
Q Consensus 478 ~-----------~~~~~~~-----~----~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~ 537 (1104)
. ....++. + ...+.+-+++.+||+|+.+|||||++.+++.+..+|+|||||.|.+.|+++
T Consensus 567 ~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~ 646 (1140)
T KOG0208|consen 567 IEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE 646 (1140)
T ss_pred ccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc
Confidence 0 0011111 1 112379999999999999999999999888899999999999999999999
Q ss_pred CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCC
Q 001304 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (1104)
Q Consensus 538 ~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~ 617 (1104)
..+.++++.++.|+.+|+|++++|+|.++.. .|.+.. .-.++.+|+||+|+|++.+|++||++
T Consensus 647 tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~~--------------~~~Rd~vEs~l~FlGLiVmeNkLK~~ 709 (1140)
T KOG0208|consen 647 TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQKAQ--------------KLSRDTVESNLEFLGLIVMENKLKEE 709 (1140)
T ss_pred cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHHh--------------hccHhhhhccceeeEEEEeecccccc
Confidence 9999999999999999999999999999875 343221 12347899999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHH-------HHHHHHH-------HHc
Q 001304 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVC-------RSLERVL-------LTM 683 (1104)
Q Consensus 618 ~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-------~~~ 683 (1104)
++.+|++|++|+|+++|+||||..||+.+|++||++.+...-.+...+..+.+... +..+... +..
T Consensus 710 T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~ 789 (1140)
T KOG0208|consen 710 TKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLA 789 (1140)
T ss_pred cHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCcccc
Confidence 99999999999999999999999999999999999988765222222211111100 0000000 000
Q ss_pred c----ccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhh
Q 001304 684 R----ITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (1104)
Q Consensus 684 ~----~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~m 759 (1104)
. .+.....++.+.++|+.+..+.++..+.+.++ ..+..|||||+|.||.++|+.+|+.|..|+|+|||+||+.|
T Consensus 790 ~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~I--l~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgA 867 (1140)
T KOG0208|consen 790 SVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKI--LLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGA 867 (1140)
T ss_pred CCccChhhhccceeEEEecCchhHHHHhhcHHHHHHH--HhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhh
Confidence 0 11123457899999999999997777777665 34678999999999999999999999999999999999999
Q ss_pred hhhcCceEEecCCchHHHhhhcceecc--cchhhHHHHHhhhhhhhhhhhHHHHhHhhhhHHHH-HHHHHHHhhhccccc
Q 001304 760 IQKADIGVGISGREGLQAARAADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLIC-FIQIFFSFISGLSGT 836 (1104)
Q Consensus 760 l~~AdvGIam~g~~~~~a~~~AD~vl~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~-~~~~~~~~~~~~~g~ 836 (1104)
||+|||||+++.+| |.-+|.|.-. +-+..-. ++.+||..+... |..+|.++++ .+||.-.++. +.-.
T Consensus 868 LKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~-vIrEGRaALVTS-----f~~FkYMalYs~iqFisv~~L-Y~~~ 937 (1140)
T KOG0208|consen 868 LKAADVGISLSEAE---ASVAAPFTSKTPSISCVPD-VIREGRAALVTS-----FACFKYMALYSAIQFISVVFL-YLIN 937 (1140)
T ss_pred hhhcccCcchhhhh---HhhcCccccCCCchhhHhH-HHhhhhhhhhhh-----HHHHHHHHHHHHHHHHhhhee-eeec
Confidence 99999999996555 6667777765 3333444 469999988776 4444555544 4455544433 3334
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhh
Q 001304 837 SLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISI 910 (1104)
Q Consensus 837 ~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 910 (1104)
..++..|.+.+.++....-++++ ...|+.++..-++|+ ..+++++.+...+++.++..++-+.+++
T Consensus 938 ~nl~D~Qfl~iDLlii~pia~~m-~~~~a~~~L~~~rP~-------~~L~s~~~~~~l~~q~vli~l~q~i~~l 1003 (1140)
T KOG0208|consen 938 SNLGDLQFLFIDLLIITPIAVMM-SRFDASDKLFPKRPP-------TNLLSKKILVPLLLQIVLICLVQWILTL 1003 (1140)
T ss_pred ccccchhhhhhHHHHHHHHHHHH-ccCcHHHHhcCCCCC-------ccccccchhhhhHHHHHHHHHHHHhhhe
Confidence 45678888888877665444432 222345554445555 3677777777666666666555555544
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=7.3e-74 Score=683.95 Aligned_cols=541 Identities=18% Similarity=0.230 Sum_probs=400.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccc-----C--CcchhhHHHHHHHHHHHHHHH----HHHHHhhh---hHhhcce-EE
Q 001304 39 EQFSRFMNQYFLLIACLQLWSLITPV-----N--PASTWGPLIFIFAVSATKEAW----DDYNRYLS---DKKANEK-EV 103 (1104)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~~-----~--~~~~~~~l~~i~~i~~~~~~~----~d~~~~~~---~~~~n~~-~~ 103 (1104)
.+|++|+.+.+++.++++++....+. + .+..+. +.+++.++.+...+ .++|..++ .+++.+. ++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~-i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFS-IFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 46788888788888888776543211 1 011222 22333334333333 35555443 3445554 67
Q ss_pred E-EEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhhccc
Q 001304 104 W-VVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (1104)
Q Consensus 104 ~-V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 182 (1104)
+ |.|||++++|++++|+|||+|.|++||.|||||+++ +|.+.||||+|||||.|+.|++..
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~------------- 168 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVI-----KGLATVDESAITGESAPVIKESGG------------- 168 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEE-----EcceEEecchhcCCCCceeccCCC-------------
Confidence 6 679999999999999999999999999999999999 566899999999999999995310
Q ss_pred eeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccC---CCCCCcC
Q 001304 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (1104)
Q Consensus 183 ~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s 259 (1104)
+.++ +++||.+.+| ++.++|+.||.+|.+|++.. ..+.+++
T Consensus 169 ----------------------------------d~~~-V~aGT~v~~G-~~~i~Vta~g~~T~lgki~~lve~a~~~kt 212 (673)
T PRK14010 169 ----------------------------------DFDN-VIGGTSVASD-WLEVEITSEPGHSFLDKMIGLVEGATRKKT 212 (673)
T ss_pred ----------------------------------ccCe-eecCceeecc-eEEEEEEEecccCHHHHHHHHHhhccccCC
Confidence 1233 9999999998 89999999999999998754 4566789
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHH
Q 001304 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (1104)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~ 339 (1104)
|+|..+..+...+.++.+ +++..+.. +.. |. .+...+.+. ..+++.+||++|+..+.++.
T Consensus 213 p~e~~l~~l~~~l~ii~l--~~~~~~~~-~~~--------~~------~~~~~~~~~---val~V~~IP~aL~~~~~~~~ 272 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFL--VVILTMYP-LAK--------FL------NFNLSIAML---IALAVCLIPTTIGGLLSAIG 272 (673)
T ss_pred HHHHHHHHHHHHHhHHHH--HHHHHHHH-HHh--------hc------cHHHHHHHH---HHHHHHhhhhhHHHHHHHHH
Confidence 999777665443322211 11111110 000 00 111111111 22455678999876555554
Q ss_pred HHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhh
Q 001304 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (1104)
Q Consensus 340 ~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1104)
..++. +|.++ ++++|++..+|+||++++||+|||||||+|++.+.++...+
T Consensus 273 ~~g~~------r~ak~----gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~------------------- 323 (673)
T PRK14010 273 IAGMD------RVTQF----NILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK------------------- 323 (673)
T ss_pred HHHHH------HHhhC----CEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-------------------
Confidence 44433 45444 49999999999999999999999999999776665543100
Q ss_pred hccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEec
Q 001304 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLE 499 (1104)
Q Consensus 420 ~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 499 (1104)
.....+++...++|+.. ..||.+.|+++++++.|+... ....+.+|
T Consensus 324 ----~~~~~~ll~~a~~~~~~-------------s~~P~~~AIv~~a~~~~~~~~-----------------~~~~~~~p 369 (673)
T PRK14010 324 ----SSSFERLVKAAYESSIA-------------DDTPEGRSIVKLAYKQHIDLP-----------------QEVGEYIP 369 (673)
T ss_pred ----CccHHHHHHHHHHhcCC-------------CCChHHHHHHHHHHHcCCCch-----------------hhhcceec
Confidence 01123455666667632 358999999999988765321 00113479
Q ss_pred cCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC--chhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001304 500 FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (1104)
Q Consensus 500 F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~--~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~ 577 (1104)
|++++|+|++.++ |+ .+.|||++.++++|.... .+.++.+.+++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~----g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT----TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------- 427 (673)
T ss_pred cccccceeEEEEC----CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE----------------
Confidence 9999999998753 33 355999999999997432 23457778889999999999877
Q ss_pred HHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC
Q 001304 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 657 (1104)
Q Consensus 578 ~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 657 (1104)
.|++++|+++++|++|++++++|++||++||+++|+|||++.||.++|+++|+
T Consensus 428 ----------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI----- 480 (673)
T PRK14010 428 ----------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV----- 480 (673)
T ss_pred ----------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-----
Confidence 47899999999999999999999999999999999999999999999999998
Q ss_pred CCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHH
Q 001304 658 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 737 (1104)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV 737 (1104)
..+++|++|+||.++|
T Consensus 481 ----------------------------------------------------------------~~v~A~~~PedK~~iV 496 (673)
T PRK14010 481 ----------------------------------------------------------------DRFVAECKPEDKINVI 496 (673)
T ss_pred ----------------------------------------------------------------ceEEcCCCHHHHHHHH
Confidence 2367899999999999
Q ss_pred HHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhh
Q 001304 738 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFY 815 (1104)
Q Consensus 738 ~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~ 815 (1104)
+.+|+.|+.|+|+|||+||+|+|++||||||| | +|+++++ +||++++++++-+.. .+.+||.+|.|+.+++.|.+.
T Consensus 497 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-g-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~ 574 (673)
T PRK14010 497 REEQAKGHIVAMTGDGTNDAPALAEANVGLAM-N-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIA 574 (673)
T ss_pred HHHHhCCCEEEEECCChhhHHHHHhCCEEEEe-C-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999999999999999 6 4556555 999999998886555 468999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhc
Q 001304 816 KSLLICFIQIFFSFISG 832 (1104)
Q Consensus 816 k~~~~~~~~~~~~~~~~ 832 (1104)
-|+.-+|..+...|...
T Consensus 575 ~~~~~~~~i~~a~~~~~ 591 (673)
T PRK14010 575 NDIAKYFAILPAMFMAA 591 (673)
T ss_pred ccHHHHHHHHHHHHHHh
Confidence 99887766555444433
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1e-72 Score=674.72 Aligned_cols=528 Identities=21% Similarity=0.225 Sum_probs=398.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccc------CCcchhhH---HHHHHHHHHHHHHHHHHHHhhh---hHhhcce-EEEE
Q 001304 39 EQFSRFMNQYFLLIACLQLWSLITPV------NPASTWGP---LIFIFAVSATKEAWDDYNRYLS---DKKANEK-EVWV 105 (1104)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~~------~~~~~~~~---l~~i~~i~~~~~~~~d~~~~~~---~~~~n~~-~~~V 105 (1104)
.||++++.+.+++.++++++..+.+. .....|.. +++.+++....+.++++|..++ .+++.+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 58999998888888888877643221 12233322 2233334555566777776654 3444554 7999
Q ss_pred EECCe-EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhhcccee
Q 001304 106 VKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKG 184 (1104)
Q Consensus 106 ~r~g~-~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~ 184 (1104)
+|+|+ +++|++++|+|||+|.|++||.|||||+++ +|.+.||||+|||||.|+.|++..
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vi-----eG~a~VDESaLTGES~PV~K~~G~--------------- 168 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVI-----EGVASVDESAITGESAPVIRESGG--------------- 168 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEE-----EccEEEEcccccCCCCceEeCCCC---------------
Confidence 99988 899999999999999999999999999999 566899999999999999995321
Q ss_pred EEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccC---CCCCCcChH
Q 001304 185 VIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAV 261 (1104)
Q Consensus 185 ~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l 261 (1104)
+..+ +++||.+.+| ++.+.|+.+|.+|.++++.. ..+.+++|+
T Consensus 169 --------------------------------~~~~-V~aGT~v~~G-~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~ 214 (679)
T PRK01122 169 --------------------------------DFSS-VTGGTRVLSD-WIVIRITANPGESFLDRMIALVEGAKRQKTPN 214 (679)
T ss_pred --------------------------------ccCe-EEeceEEEee-eEEEEEEEecccCHHHHHHHHHHhccccCCHH
Confidence 1223 9999999998 79999999999999998754 455667999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHH
Q 001304 262 DAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSL 341 (1104)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~ 341 (1104)
|..++.+...++.+.+++++.+..+. ||. +.++ .+... +.+++.++|++|+..+..+...
T Consensus 215 e~al~~l~~~l~~i~l~~~~~~~~~~-----------~~~----g~~~--~l~~~---iallV~aiP~alg~l~~~i~i~ 274 (679)
T PRK01122 215 EIALTILLAGLTIIFLLVVATLPPFA-----------AYS----GGAL--SITVL---VALLVCLIPTTIGGLLSAIGIA 274 (679)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHH-----------HHh----CchH--HHHHH---HHHHHHcccchhhhHHHHHHHH
Confidence 98888776655544333332222211 111 0111 12222 3367788999875444433333
Q ss_pred HHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhc
Q 001304 342 YAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT 421 (1104)
Q Consensus 342 ~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1104)
.+. +|.+. ++++|+..++|+||++++||+|||||||+|+|++.+++..+.
T Consensus 275 g~~------r~ak~----gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-------------------- 324 (679)
T PRK01122 275 GMD------RVLQA----NVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-------------------- 324 (679)
T ss_pred HHH------HHhcC----CeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC--------------------
Confidence 322 45444 489999999999999999999999999999999988753110
Q ss_pred cCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHh-cCcEEEeecCcEEEEEeCCeeEEEEEEEEecc
Q 001304 422 SGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ-LHMVLVNKNASILEIKFNGSVLQYEILETLEF 500 (1104)
Q Consensus 422 ~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F 500 (1104)
.+..+++.+.++|+.. ..+|...|+++++++ .+... ....++..+.+||
T Consensus 325 ---~~~~~ll~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--------------~~~~~~~~~~~pF 374 (679)
T PRK01122 325 ---VTEEELADAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--------------RDLQSLHATFVPF 374 (679)
T ss_pred ---CCHHHHHHHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--------------hhhccccceeEee
Confidence 0112455556666532 246889999999976 34311 0112455678899
Q ss_pred CCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC--CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHH
Q 001304 501 TSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578 (1104)
Q Consensus 501 ~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~ 578 (1104)
++.+|+|++.++ | ..|+|||++.+++.|... ..++++++.+++++++|+|++++|
T Consensus 375 ~s~~~~~gv~~~----g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va----------------- 431 (679)
T PRK01122 375 SAQTRMSGVDLD----G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA----------------- 431 (679)
T ss_pred cCcCceEEEEEC----C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE-----------------
Confidence 999998887652 3 478999999999999642 224678888999999999999999
Q ss_pred HHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCC
Q 001304 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 658 (1104)
Q Consensus 579 ~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~ 658 (1104)
.|++++|+++++|++|+|++++|++||++||+++|+|||++.||.+||+++|+
T Consensus 432 ---------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI------ 484 (679)
T PRK01122 432 ---------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV------ 484 (679)
T ss_pred ---------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC------
Confidence 36789999999999999999999999999999999999999999999999998
Q ss_pred CeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHH
Q 001304 659 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE 738 (1104)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~ 738 (1104)
..+++|++|+||.++|+
T Consensus 485 ---------------------------------------------------------------d~v~A~~~PedK~~iV~ 501 (679)
T PRK01122 485 ---------------------------------------------------------------DDFLAEATPEDKLALIR 501 (679)
T ss_pred ---------------------------------------------------------------cEEEccCCHHHHHHHHH
Confidence 23678999999999999
Q ss_pred HHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhh
Q 001304 739 LLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFY 815 (1104)
Q Consensus 739 ~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~ 815 (1104)
.+|+.|+.|+|+|||+||+|||++||||||| | +|+++++ +||++++|+++-+.. .+.+||.....--.+..|++.
T Consensus 502 ~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-g-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 502 QEQAEGRLVAMTGDGTNDAPALAQADVGVAM-N-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred HHHHcCCeEEEECCCcchHHHHHhCCEeEEe-C-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 9999999999999999999999999999999 6 4656555 999999998886555 468999887644444455544
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=2.9e-69 Score=643.19 Aligned_cols=545 Identities=20% Similarity=0.216 Sum_probs=404.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccc------cC---CcchhhH--HHHHHHHHHHHHHHHHHHHhhhhHh---hcce-EE
Q 001304 39 EQFSRFMNQYFLLIACLQLWSLITP------VN---PASTWGP--LIFIFAVSATKEAWDDYNRYLSDKK---ANEK-EV 103 (1104)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~------~~---~~~~~~~--l~~i~~i~~~~~~~~d~~~~~~~~~---~n~~-~~ 103 (1104)
.||+++..+.+++.++++++..+.+ .. ++...+. +++.+++....+.++++|..++..+ +.+. .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 5899999877777788877754321 01 2211111 2222344555677777777665443 3444 58
Q ss_pred EEEE-CCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhhccc
Q 001304 104 WVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (1104)
Q Consensus 104 ~V~r-~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 182 (1104)
+|+| ||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|++..
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~------------- 169 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVI-----EGVASVDESAITGESAPVIKESGG------------- 169 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EccEEEEcccccCCCCceeecCCC-------------
Confidence 8886 899999999999999999999999999999999 566999999999999999995321
Q ss_pred eeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccC---CCCCCcC
Q 001304 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (1104)
Q Consensus 183 ~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s 259 (1104)
....+++||.+.+| ++.++|+.+|.+|.++++.. ..+.+++
T Consensus 170 -----------------------------------~~~~V~aGT~v~~G-~~~i~Vt~~g~~S~lgri~~lve~a~~~kt 213 (675)
T TIGR01497 170 -----------------------------------DFASVTGGTRILSD-WLVVECTANPGETFLDRMIALVEGAQRRKT 213 (675)
T ss_pred -----------------------------------CcceeecCcEEEee-EEEEEEEEecccCHHHHHHHHHHhcccCCC
Confidence 01138999999998 89999999999999998754 4556679
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHH
Q 001304 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (1104)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~ 339 (1104)
|+|..++.+...+.++.+++++...... .| ....+ .+... +.+++.++|++|......+.
T Consensus 214 plq~~l~~l~~~l~~v~li~~~~~~~~~-~~--------------~~~~~--~~~~l---vallV~aiP~aLg~l~~av~ 273 (675)
T TIGR01497 214 PNEIALTILLIALTLVFLLVTATLWPFA-AY--------------GGNAI--SVTVL---VALLVCLIPTTIGGLLSAIG 273 (675)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh--------------cChhH--HHHHH---HHHHHHhCchhhhhHHHHHH
Confidence 9998888766544333222221111100 01 01111 11111 23677889996532222111
Q ss_pred HHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhh
Q 001304 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (1104)
Q Consensus 340 ~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1104)
...+. +|.+. ++++|+..++|+||++|+||||||||||+|+|++.+++..+.
T Consensus 274 iag~~------r~ar~----gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~------------------ 325 (675)
T TIGR01497 274 IAGMD------RVLGF----NVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG------------------ 325 (675)
T ss_pred HHHHH------HHHHC----CeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC------------------
Confidence 11211 44444 489999999999999999999999999999999998763110
Q ss_pred hccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEec
Q 001304 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLE 499 (1104)
Q Consensus 420 ~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 499 (1104)
.+..+++...++|+.. ..+|.+.|++++|++.|.... ...++..+..|
T Consensus 326 -----~~~~~ll~~aa~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~--------------~~~~~~~~~~p 373 (675)
T TIGR01497 326 -----VDEKTLADAAQLASLA-------------DDTPEGKSIVILAKQLGIRED--------------DVQSLHATFVE 373 (675)
T ss_pred -----CcHHHHHHHHHHhcCC-------------CCCcHHHHHHHHHHHcCCCcc--------------ccccccceEEE
Confidence 0123455666666532 357999999999988765321 11224457789
Q ss_pred cCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC--chhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001304 500 FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (1104)
Q Consensus 500 F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~--~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~ 577 (1104)
|++.+|+|++.+. +| ..+.|||+|.+++.|.... .+.++++.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~---~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~--------------- 433 (675)
T TIGR01497 374 FTAQTRMSGINLD---NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE--------------- 433 (675)
T ss_pred EcCCCcEEEEEEe---CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE---------------
Confidence 9999887776543 23 4689999999999886432 246788889999999999999993
Q ss_pred HHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC
Q 001304 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 657 (1104)
Q Consensus 578 ~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 657 (1104)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+
T Consensus 434 -----------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI----- 485 (675)
T TIGR01497 434 -----------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----- 485 (675)
T ss_pred -----------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC-----
Confidence 5689999999999999999999999999999999999999999999999998
Q ss_pred CCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHH
Q 001304 658 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 737 (1104)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV 737 (1104)
..+++|++|++|..+|
T Consensus 486 ----------------------------------------------------------------~~v~a~~~PedK~~~v 501 (675)
T TIGR01497 486 ----------------------------------------------------------------DDFIAEATPEDKIALI 501 (675)
T ss_pred ----------------------------------------------------------------CEEEcCCCHHHHHHHH
Confidence 2357899999999999
Q ss_pred HHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhh
Q 001304 738 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYK 816 (1104)
Q Consensus 738 ~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k 816 (1104)
+.+|+.|+.|+|+|||.||+|||++|||||+| |+...-++++||++++++++-+.. ++.+||..+.+...+..|++..
T Consensus 502 ~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm-~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~ 580 (675)
T TIGR01497 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIAN 580 (675)
T ss_pred HHHHHcCCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecc
Confidence 99999999999999999999999999999999 543333455999999998876555 4689999999888888898887
Q ss_pred hHHHHHHHHHHHhh
Q 001304 817 SLLICFIQIFFSFI 830 (1104)
Q Consensus 817 ~~~~~~~~~~~~~~ 830 (1104)
.+.-+|..+-..|.
T Consensus 581 ~~~~~~~~~~~~~~ 594 (675)
T TIGR01497 581 DVAKYFAIIPAIFA 594 (675)
T ss_pred cHHHHHHHHHHHHH
Confidence 77766654433333
No 23
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-69 Score=612.66 Aligned_cols=757 Identities=20% Similarity=0.237 Sum_probs=484.7
Q ss_pred CCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 001304 16 LYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSD 95 (1104)
Q Consensus 16 ~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~ 95 (1104)
+||+|+..-..+++. ..+.|.-..|+..|..+...|++.-. .|+.....|++++.+-+.. .+|..+..+..
T Consensus 175 ~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLDe----yWYySlFtLfMli~fE~tl-V~Qrm~~lse~ 245 (1160)
T KOG0209|consen 175 KYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLIAFEATL-VKQRMRTLSEF 245 (1160)
T ss_pred HhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhHH----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 599999988887765 56666666666556666666655322 2444556666666554432 23444444444
Q ss_pred Hhhc--ceEEEEEECCeEEEEeccCCccceEEEEec---CCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecccc
Q 001304 96 KKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLRE---NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAA 170 (1104)
Q Consensus 96 ~~~n--~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~---g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~ 170 (1104)
+.+. +..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|| .|.|.|||++|||||.|..|.+...
T Consensus 246 R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL-----~GsciVnEaMLtGESvPl~KE~Ie~ 320 (1160)
T KOG0209|consen 246 RTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL-----RGSCIVNEAMLTGESVPLMKESIEL 320 (1160)
T ss_pred HhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE-----ecceeechhhhcCCCcccccccccc
Confidence 5554 346889999999999999999999999988 67899999999 7889999999999999999977542
Q ss_pred ccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceec-------------cCceEEEE
Q 001304 171 CMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR-------------NTEWACGV 237 (1104)
Q Consensus 171 ~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~-------------~~~~~~gv 237 (1104)
.. .++.... + ..+...++|.||.+. +| -+.+.
T Consensus 321 ~~---~d~~ld~----------------~---------------~d~k~hVlfGGTkivQht~p~~~slk~pDg-gc~a~ 365 (1160)
T KOG0209|consen 321 RD---SDDILDI----------------D---------------RDDKLHVLFGGTKIVQHTPPKKASLKTPDG-GCVAY 365 (1160)
T ss_pred CC---hhhhccc----------------c---------------cccceEEEEcCceEEEecCCccccccCCCC-CeEEE
Confidence 11 1111100 0 013445777777762 34 38899
Q ss_pred EEEecCccccccccCCC---CCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhh
Q 001304 238 AVYTGNETKLGMTRGIP---EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV 314 (1104)
Q Consensus 238 Vv~tG~~T~~~~~~~~~---~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (1104)
|++||.||..|+..+.. ..+-|. |..-.++|++ +++++.+...++.|.....+. ...-+.
T Consensus 366 VlrTGFeTSQGkLvRtilf~aervTa-----Nn~Etf~FIL-FLlVFAiaAa~Yvwv~Gskd~--------~RsrYK--- 428 (1160)
T KOG0209|consen 366 VLRTGFETSQGKLVRTILFSAERVTA-----NNRETFIFIL-FLLVFAIAAAGYVWVEGSKDP--------TRSRYK--- 428 (1160)
T ss_pred EEeccccccCCceeeeEEecceeeee-----ccHHHHHHHH-HHHHHHHHhhheEEEecccCc--------chhhhh---
Confidence 99999999999876531 111111 1111222222 222222233344444321110 011122
Q ss_pred hHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEE
Q 001304 315 IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 394 (1104)
Q Consensus 315 ~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~ 394 (1104)
.++.|.+++...||.-||+.++++-...-. .+ .+.++.|..+--+--.|+||+.|||||||||+..|.|+
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~------AL----ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~ 498 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLI------AL----AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVE 498 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHH------HH----HHhceeecCccccccCCceeEEEecCCCccccccEEEE
Confidence 235666788899999998777665432211 01 12246677777788999999999999999999999999
Q ss_pred EEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEE
Q 001304 395 RCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474 (1104)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~ 474 (1104)
.+.-.... .... ... ++...+-+.++|.||+....+++ -.|||.|+|.+++. |+.+.
T Consensus 499 Gvag~~~~-----~~~~------~~~---s~~p~~t~~vlAscHsLv~le~~------lVGDPlEKA~l~~v---~W~~~ 555 (1160)
T KOG0209|consen 499 GVAGLSAD-----EGAL------TPA---SKAPNETVLVLASCHSLVLLEDK------LVGDPLEKATLEAV---GWNLE 555 (1160)
T ss_pred ecccccCC-----cccc------cch---hhCCchHHHHHHHHHHHHHhcCc------ccCChHHHHHHHhc---Ccccc
Confidence 87432110 0000 000 11122456889999998765432 36999999999875 33332
Q ss_pred eecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCC---CcEEEEecChHHhhhhhhccCCchhHHHHHHHHHH
Q 001304 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS---GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 551 (1104)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~---~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a 551 (1104)
..+.. ..-.+.....+|.+.+.|+|..|||||++..... -++++.+|||||+|-.++.+ .+.++++...+|+
T Consensus 556 k~~~v---~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--vP~dY~~iYk~yt 630 (1160)
T KOG0209|consen 556 KKNSV---CPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--VPKDYDEIYKRYT 630 (1160)
T ss_pred cCccc---CCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--CchhHHHHHHHHh
Confidence 22110 0012333467889999999999999999986532 36899999999999999864 4678999999999
Q ss_pred hccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCe
Q 001304 552 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 631 (1104)
Q Consensus 552 ~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~ 631 (1104)
++|.|||++|||.+.+--..+ .-+..++.+|+||+|.|++.+..|++++++++|+.|++++++
T Consensus 631 R~GsRVLALg~K~l~~~~~~q-----------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~ 693 (1160)
T KOG0209|consen 631 RQGSRVLALGYKPLGDMMVSQ-----------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHR 693 (1160)
T ss_pred hccceEEEEecccccccchhh-----------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCce
Confidence 999999999999987321110 011234789999999999999999999999999999999999
Q ss_pred EEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHH--HHHHHHHH-HHccccCC---CCCceEEEEcchhHHHH
Q 001304 632 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV--CRSLERVL-LTMRITTS---EPKDVAFVVDGWALEIA 705 (1104)
Q Consensus 632 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~---~~~~~~lvi~g~~l~~~ 705 (1104)
++|+|||++.||.++|+++|+...... ++...+...... +...+... -.+..... --..+.++++|..++++
T Consensus 694 vvMITGDnpLTAchVak~v~iv~k~~~--vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l 771 (1160)
T KOG0209|consen 694 VVMITGDNPLTACHVAKEVGIVEKPTL--VLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHL 771 (1160)
T ss_pred EEEEeCCCccchheehheeeeeccCce--eeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHH
Confidence 999999999999999999999765321 111111111000 00000000 00000000 12345678999999888
Q ss_pred HHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchH------H---
Q 001304 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL------Q--- 776 (1104)
Q Consensus 706 ~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~------~--- 776 (1104)
.... .. ........||||+.|+||..++..+|+.|+.++|+|||.||+.|||+||||||+-.+..+ .
T Consensus 772 ~~~~--~l--~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~ 847 (1160)
T KOG0209|consen 772 QATD--QL--RRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRK 847 (1160)
T ss_pred hhhH--HH--HHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhh
Confidence 7643 11 122455789999999999999999999999999999999999999999999987332210 0
Q ss_pred -------H------------------------------------------------hhhcceecc-----cchhhHHH--
Q 001304 777 -------A------------------------------------------------ARAADYSIG-----KFRFLKRL-- 794 (1104)
Q Consensus 777 -------a------------------------------------------------~~~AD~vl~-----~f~~l~~l-- 794 (1104)
+ .+-.|-.+. ....+..+
T Consensus 848 ~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~ 927 (1160)
T KOG0209|consen 848 KKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTH 927 (1160)
T ss_pred hccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHH
Confidence 0 000111111 01111111
Q ss_pred HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhh-ccC
Q 001304 795 ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTV-MQH 873 (1104)
Q Consensus 795 ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~-~~~ 873 (1104)
++..||+..-..- +.||-+.+.-..-.|+....+....=|...|.+.--+++... ++..-+..|-+.+ ..+
T Consensus 928 IIrQGRctLVtTl-----QMfKILALN~LisAYslSvlyldGVKfgD~QaTisGlLla~c---FlfISrskPLetLSkeR 999 (1160)
T KOG0209|consen 928 IIRQGRCTLVTTL-----QMFKILALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAAC---FLFISRSKPLETLSKER 999 (1160)
T ss_pred HHHhcchhHHHHH-----HHHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHHH---HhheecCCchhhHhhcC
Confidence 4689999888763 445656655444445443333333336777777655444332 2222333344443 345
Q ss_pred CccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheee
Q 001304 874 PQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA 914 (1104)
Q Consensus 874 p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 914 (1104)
|. -.++|..++...+++-..|-..+++++-.++.
T Consensus 1000 P~-------~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~ 1033 (1160)
T KOG0209|consen 1000 PL-------PNIFNVYIILSVLLQFAVHIATLVYITGEAYK 1033 (1160)
T ss_pred CC-------CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHh
Confidence 54 25777777776666666666666665554443
No 24
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-68 Score=586.68 Aligned_cols=599 Identities=18% Similarity=0.222 Sum_probs=431.1
Q ss_pred cccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC--CcchhhHHHHHHHHHHHHHHHHH
Q 001304 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--PASTWGPLIFIFAVSATKEAWDD 88 (1104)
Q Consensus 11 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~--~~~~~~~l~~i~~i~~~~~~~~d 88 (1104)
++|+++||.|++.+.|.+.+ +.|+.-|-+|..+..=..|++.....-+... .|..++.++..+++++...++|+
T Consensus 43 ~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE 118 (942)
T KOG0205|consen 43 EERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEE 118 (942)
T ss_pred HHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeec
Confidence 46999999999998886544 3344444555544433444444432211111 12334555666678888899999
Q ss_pred HHHhhh---hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEe
Q 001304 89 YNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR 165 (1104)
Q Consensus 89 ~~~~~~---~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K 165 (1104)
+++-.. .++-...+++|+|||+|.+++++.||||||+.++.||.||||++||+.. .+.||+|+|||||.|++|
T Consensus 119 ~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLpvtK 194 (942)
T KOG0205|consen 119 NNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLPVTK 194 (942)
T ss_pred cccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCcccccc
Confidence 987543 4455567899999999999999999999999999999999999999765 399999999999999999
Q ss_pred eccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcc
Q 001304 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (1104)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T 245 (1104)
. .++.+|+||+++.|+ +.+||++||..|
T Consensus 195 h---------------------------------------------------~gd~vfSgSTcKqGE-~eaVViATg~~T 222 (942)
T KOG0205|consen 195 H---------------------------------------------------PGDEVFSGSTCKQGE-IEAVVIATGVHT 222 (942)
T ss_pred C---------------------------------------------------CCCceecccccccce-EEEEEEEeccce
Confidence 3 456799999999996 999999999999
Q ss_pred ccccccC--CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhh
Q 001304 246 KLGMTRG--IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (1104)
Q Consensus 246 ~~~~~~~--~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1104)
..|+-+. .......++++.++-+..++.+...+-.++..++. ||. ....+.... -..++++
T Consensus 223 F~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vm-----------y~~----q~R~~r~~i--~nLlvll 285 (942)
T KOG0205|consen 223 FFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVM-----------YPI----QHRLYRDGI--DNLLVLL 285 (942)
T ss_pred eehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhh-----------hhh----hhhhhhhhh--hheheee
Confidence 9998765 23566789999999887655443322222211111 111 111122111 1112244
Q ss_pred hccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEE----EEEe
Q 001304 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR----CCIG 399 (1104)
Q Consensus 324 ~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~----~~~~ 399 (1104)
..-||++||..++....+++- ++.+ +++.++..+++|+|+.+|++|+|||||||.|++++.+ ++..
T Consensus 286 IGgiPiamPtVlsvTMAiGs~------rLaq----qgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~ 355 (942)
T KOG0205|consen 286 IGGIPIAMPTVLSVTMAIGSH------RLSQ----QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVK 355 (942)
T ss_pred ecccccccceeeeehhhHHHH------HHHh----cccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeec
Confidence 455899987444433334433 2222 3478999999999999999999999999999999876 2222
Q ss_pred cEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCc
Q 001304 400 GIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNAS 479 (1104)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~ 479 (1104)
|. +++-.-++.|+|. . .+..|..|.|++...++-
T Consensus 356 gv----------------------~~D~~~L~A~rAs----r----------~en~DAID~A~v~~L~dP---------- 389 (942)
T KOG0205|consen 356 GV----------------------DKDDVLLTAARAS----R----------KENQDAIDAAIVGMLADP---------- 389 (942)
T ss_pred CC----------------------ChHHHHHHHHHHh----h----------hcChhhHHHHHHHhhcCH----------
Confidence 21 1222222223322 1 124577889998876531
Q ss_pred EEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC-chhHHHHHHHHHHhccceEE
Q 001304 480 ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-QTRTFVEAVEQYSQLGLRTL 558 (1104)
Q Consensus 480 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~-~~~~~~~~~~~~a~~GlR~l 558 (1104)
.+.+..|+.++.+||++..||....+.++ +|+-+-.+||||+.|++.|+... .+++..+.+++||++|+|.|
T Consensus 390 ------Keara~ikevhF~PFnPV~Krta~ty~d~-dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSL 462 (942)
T KOG0205|consen 390 ------KEARAGIKEVHFLPFNPVDKRTALTYIDP-DGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSL 462 (942)
T ss_pred ------HHHhhCceEEeeccCCccccceEEEEECC-CCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhh
Confidence 12345688999999999999999999997 78999999999999999998654 46789999999999999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 559 ~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++|++..++..- +.-....+++|+.-+-||+|.+..++|+....-|..|.|+|||
T Consensus 463 gVArq~v~e~~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmitgd 517 (942)
T KOG0205|consen 463 AVARQEVPEKTK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 517 (942)
T ss_pred hhhhhccccccc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecch
Confidence 999998765420 1223568999999999999999999999999999999999999
Q ss_pred CHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhh
Q 001304 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718 (1104)
Q Consensus 639 ~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~ 718 (1104)
...-+...++.+|+-.+-.... .+-|...++- +.|.... ..
T Consensus 518 qlaI~keTgrrlgmgtnmypss--~llG~~~~~~------------------------~~~~~v~-------------el 558 (942)
T KOG0205|consen 518 QLAIAKETGRRLGMGTNMYPSS--ALLGLGKDGS------------------------MPGSPVD-------------EL 558 (942)
T ss_pred HHHHHHhhhhhhccccCcCCch--hhccCCCCCC------------------------CCCCcHH-------------HH
Confidence 9999999999988754421100 0000000000 0000000 01
Q ss_pred hccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH-HH
Q 001304 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-IL 796 (1104)
Q Consensus 719 ~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l-ll 796 (1104)
+.++.-|+.+.|++|.++|+.||+.|+.++|+|||+||+|+||.||+||+. . +.++|++ +||+|++.......+ .+
T Consensus 559 ie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiav-a-~atdaar~asdiVltepglSviI~av 636 (942)
T KOG0205|consen 559 IEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAV 636 (942)
T ss_pred hhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceee-c-cchhhhcccccEEEcCCCchhhHHHH
Confidence 224677899999999999999999999999999999999999999999998 3 3455666 889999986654443 35
Q ss_pred hhhhhhhhhhhHHHHhHhh
Q 001304 797 VHGRYSYNRTAFLSQYSFY 815 (1104)
Q Consensus 797 ~~GR~~~~~i~~~i~~~~~ 815 (1104)
..+|.+|+|......|.+.
T Consensus 637 ltSraIfqrmknytiyavs 655 (942)
T KOG0205|consen 637 LTSRAIFQRMKNYTIYAVS 655 (942)
T ss_pred HHHHHHHHHHhhheeeeeh
Confidence 7899999999776655544
No 25
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.6e-64 Score=603.89 Aligned_cols=473 Identities=31% Similarity=0.408 Sum_probs=378.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEE
Q 001304 72 PLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYV 151 (1104)
Q Consensus 72 ~l~~i~~i~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~V 151 (1104)
+++..++-...+...++..+...++.+++++++|+|+| ++.|++++|+|||+|.+++||.|||||+++ +|.+.|
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl-----~g~~~v 79 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLL-----SGSCFV 79 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEE-----EccEEE
Confidence 33333333344434444444444445889999999999 999999999999999999999999999999 566999
Q ss_pred EeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccC
Q 001304 152 ETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNT 231 (1104)
Q Consensus 152 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~ 231 (1104)
|||+|||||.|+.|++ ++.+++|+.+.+|
T Consensus 80 des~LTGEs~pv~k~~---------------------------------------------------g~~v~~gs~~~~G 108 (499)
T TIGR01494 80 DESNLTGESVPVLKTA---------------------------------------------------GDAVFAGTYVFNG 108 (499)
T ss_pred EcccccCCCCCeeecc---------------------------------------------------CCccccCcEEecc
Confidence 9999999999999942 3567899999988
Q ss_pred ceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHH-HHHHHHHHHHHHHHhhccccccccccccceeeccCCCc
Q 001304 232 EWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLT-GAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEF 307 (1104)
Q Consensus 232 ~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (1104)
.....|..+|.+|..+++.. .....++++++..+++. .++.++.++++++.++.+..+.. ...
T Consensus 109 -~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~------------~~~ 175 (499)
T TIGR01494 109 -TLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLW------------DPN 175 (499)
T ss_pred -EEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------ccc
Confidence 68999999999998887543 33444688899999988 55555555555444433211100 000
Q ss_pred chhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCC
Q 001304 308 PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLT 387 (1104)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT 387 (1104)
+|... +..++.+++.++|++|++++.++...+.. +|++. ++++|+++.+|+||+++++|||||||||
T Consensus 176 ~~~~~---~~~~~~vl~~~~P~aL~~~~~~~~~~~~~------~~~~~----gilvk~~~~lE~l~~v~~i~fDKTGTLT 242 (499)
T TIGR01494 176 SIFKI---FLRALILLVIAIPIALPLAVTIALAVGDA------RLAKK----GIVVRSLNALEELGKVDYICSDKTGTLT 242 (499)
T ss_pred cHHHH---HHHHHHHHHHhcCCcHHHHHHHHHHHHHH------HHHHC----CcEEechhhhhhccCCcEEEeeCCCccc
Confidence 23333 34455688899999999999888887754 55444 5899999999999999999999999999
Q ss_pred CcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHH
Q 001304 388 ENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAA 467 (1104)
Q Consensus 388 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~ 467 (1104)
+|+|+|++++..+. ++.++||.|.|++++++
T Consensus 243 ~~~~~v~~~~~~~~-------------------------------------------------~~~s~hp~~~ai~~~~~ 273 (499)
T TIGR01494 243 KNEMSFKKVSVLGG-------------------------------------------------EYLSGHPDERALVKSAK 273 (499)
T ss_pred cCceEEEEEEecCC-------------------------------------------------CcCCCChHHHHHHHHhh
Confidence 99999999865321 02367999999999986
Q ss_pred hcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHHHH
Q 001304 468 QLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAV 547 (1104)
Q Consensus 468 ~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~ 547 (1104)
..+ +...||++.+|+|+++++.. ++ .|+||+++.+.+.|.. +.+.+
T Consensus 274 ~~~------------------------~~~~~f~~~~~~~~~~~~~~-~~---~~~~G~~~~i~~~~~~------~~~~~ 319 (499)
T TIGR01494 274 WKI------------------------LNVFEFSSVRKRMSVIVRGP-DG---TYVKGAPEFVLSRVKD------LEEKV 319 (499)
T ss_pred hcC------------------------cceeccCCCCceEEEEEecC-Cc---EEEeCCHHHHHHhhHH------HHHHH
Confidence 411 24579999999999999863 22 3789999999998742 44566
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
++++.+|+|++++|++ -+++|+++++|++|++++++|+.|++
T Consensus 320 ~~~~~~g~~~~~~a~~--------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~ 361 (499)
T TIGR01494 320 KELAQSGLRVLAVASK--------------------------------------ETLLGLLGLEDPLRDDAKETISELRE 361 (499)
T ss_pred HHHHhCCCEEEEEEEC--------------------------------------CeEEEEEEecCCCchhHHHHHHHHHH
Confidence 6788999999999953 26999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHH
Q 001304 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (1104)
Q Consensus 628 aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 707 (1104)
+|++++|+|||+..+|..+|+++|+
T Consensus 362 ~gi~~~~ltGD~~~~a~~ia~~lgi------------------------------------------------------- 386 (499)
T TIGR01494 362 AGIRVIMLTGDNVLTAKAIAKELGI------------------------------------------------------- 386 (499)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHcCc-------------------------------------------------------
Confidence 9999999999999999999999985
Q ss_pred HHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 708 ~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
+++++|++|.++|+.+|+.|+.|+|+|||.||+||+++|||||+| + ++.+||+++.+
T Consensus 387 -----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~-~-----a~~~adivl~~ 443 (499)
T TIGR01494 387 -----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAM-G-----AKAAADIVLLD 443 (499)
T ss_pred -----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcccc-c-----hHHhCCeEEec
Confidence 247899999999999999999999999999999999999999999 4 57789999998
Q ss_pred chhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHH
Q 001304 788 FRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 826 (1104)
Q Consensus 788 f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~ 826 (1104)
++..... ++.+||+.++++++.+.|.+++|+......++
T Consensus 444 ~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 444 DNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554333 57899999999999999999999886554443
No 26
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-60 Score=563.16 Aligned_cols=487 Identities=20% Similarity=0.230 Sum_probs=370.7
Q ss_pred HHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEE-CCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCc
Q 001304 75 FIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (1104)
Q Consensus 75 ~i~~i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r-~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G 147 (1104)
+++++-.+-+++|++.+.|+ ..++.++++++++ ||++++|+.++|+|||+|.|+|||+||+||+++ +|
T Consensus 179 ~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~-----~G 253 (713)
T COG2217 179 MLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV-----SG 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE-----eC
Confidence 44445556678888877654 3455788998877 455899999999999999999999999999999 78
Q ss_pred cEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecce
Q 001304 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (1104)
Q Consensus 148 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~ 227 (1104)
...||||+|||||.|+.| ..++.++.||.
T Consensus 254 ~s~vDeS~iTGEs~PV~k---------------------------------------------------~~Gd~V~aGti 282 (713)
T COG2217 254 SSSVDESMLTGESLPVEK---------------------------------------------------KPGDEVFAGTV 282 (713)
T ss_pred cEEeecchhhCCCCCEec---------------------------------------------------CCCCEEeeeEE
Confidence 899999999999999999 45678999999
Q ss_pred eccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccC
Q 001304 228 LRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYP 304 (1104)
Q Consensus 228 l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 304 (1104)
+.+| .....|+.+|.||.+.++.+ .++.+++++|+..|++..++.+..++++++.+++|+++..
T Consensus 283 N~~G-~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~------------ 349 (713)
T COG2217 283 NLDG-SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG------------ 349 (713)
T ss_pred ECCc-cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC------------
Confidence 9998 79999999999999998765 6778889999999999999999888777777664322211
Q ss_pred CCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCC
Q 001304 305 QEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384 (1104)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTG 384 (1104)
.+|...+..+++ +++..+|++|.++...+.....- + ..+.++++|+...+|.++++|+++|||||
T Consensus 350 --~~~~~a~~~a~a---vLVIaCPCALgLAtP~ai~~g~g------~----aA~~GILiK~g~~LE~l~~v~tvvFDKTG 414 (713)
T COG2217 350 --GDWETALYRALA---VLVIACPCALGLATPTAILVGIG------R----AARRGILIKGGEALERLAKVDTVVFDKTG 414 (713)
T ss_pred --CcHHHHHHHHHh---heeeeCccHHHhHHHHHHHHHHH------H----HHhCceEEeChHHHHhhccCCEEEEeCCC
Confidence 234444433333 56677777764433333322211 1 12346999999999999999999999999
Q ss_pred CCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHH
Q 001304 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (1104)
Q Consensus 385 TLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~ 464 (1104)
|||+|++++.++...+. +..+++...+ + + +..++||..+|+++
T Consensus 415 TLT~G~p~v~~v~~~~~------------------------~e~~~L~laA-a--l----------E~~S~HPiA~AIv~ 457 (713)
T COG2217 415 TLTEGKPEVTDVVALDG------------------------DEDELLALAA-A--L----------EQHSEHPLAKAIVK 457 (713)
T ss_pred CCcCCceEEEEEecCCC------------------------CHHHHHHHHH-H--H----------HhcCCChHHHHHHH
Confidence 99999999999864321 0111221111 1 1 12368999999999
Q ss_pred HHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHH
Q 001304 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (1104)
Q Consensus 465 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (1104)
+|+..|..-. .. .+.+| .+-....+ +| ..+.-|.+.-+.+.-.+ .....
T Consensus 458 ~a~~~~~~~~---------------~~---~~~i~----G~Gv~~~v----~g--~~v~vG~~~~~~~~~~~---~~~~~ 506 (713)
T COG2217 458 AAAERGLPDV---------------ED---FEEIP----GRGVEAEV----DG--ERVLVGNARLLGEEGID---LPLLS 506 (713)
T ss_pred HHHhcCCCCc---------------cc---eeeec----cCcEEEEE----CC--EEEEEcCHHHHhhcCCC---ccchh
Confidence 9987662110 00 11111 11111111 33 23455777665432111 11155
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHH
Q 001304 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (1104)
Q Consensus 545 ~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~ 624 (1104)
+..+.+..+|..++.++ .|.+++|+++++|++|++++++|++
T Consensus 507 ~~~~~~~~~G~t~v~va--------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~ 548 (713)
T COG2217 507 ERIEALESEGKTVVFVA--------------------------------------VDGKLVGVIALADELRPDAKEAIAA 548 (713)
T ss_pred hhHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEEeCCCChhHHHHHHH
Confidence 67888899999988888 5679999999999999999999999
Q ss_pred HHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHH
Q 001304 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (1104)
Q Consensus 625 l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 704 (1104)
||+.|+++.|+|||+..+|..+|+++||
T Consensus 549 L~~~Gi~~~mLTGDn~~~A~~iA~~lGI---------------------------------------------------- 576 (713)
T COG2217 549 LKALGIKVVMLTGDNRRTAEAIAKELGI---------------------------------------------------- 576 (713)
T ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHcCh----------------------------------------------------
Confidence 9999999999999999999999999998
Q ss_pred HHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-hhcce
Q 001304 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADY 783 (1104)
Q Consensus 705 ~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~AD~ 783 (1104)
..+.+++.|++|.++|+.+|+.|+.|+|+|||+||+|+|.+||||||| |. |++++ ++||+
T Consensus 577 -----------------d~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm-G~-GtDvA~eaADv 637 (713)
T COG2217 577 -----------------DEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM-GS-GTDVAIEAADV 637 (713)
T ss_pred -----------------HhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee-cC-CcHHHHHhCCE
Confidence 235678999999999999999999999999999999999999999999 66 55555 59999
Q ss_pred ecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHH
Q 001304 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICF 822 (1104)
Q Consensus 784 vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~ 822 (1104)
+|++++..... .+..+|.++.++++.+.|.|..|+++..
T Consensus 638 vL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ip 677 (713)
T COG2217 638 VLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIP 677 (713)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987664433 4688999999999999999988876543
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=4.1e-59 Score=575.95 Aligned_cols=478 Identities=18% Similarity=0.199 Sum_probs=366.6
Q ss_pred HHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccE
Q 001304 76 IFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVC 149 (1104)
Q Consensus 76 i~~i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~ 149 (1104)
++++..+.+++|++.+.|+ ..++.+.+++|+|||++++|++++|+|||+|+|++||+|||||+|+ +|.+
T Consensus 212 i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi-----~g~~ 286 (741)
T PRK11033 212 VLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL-----SPFA 286 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE-----ECcE
Confidence 3334445566666655543 3455788999999999999999999999999999999999999999 5668
Q ss_pred EEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceec
Q 001304 150 YVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR 229 (1104)
Q Consensus 150 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~ 229 (1104)
.||||+|||||.|+.| ..++.+++||.+.
T Consensus 287 ~vdes~lTGEs~Pv~k---------------------------------------------------~~Gd~V~aGt~~~ 315 (741)
T PRK11033 287 SFDESALTGESIPVER---------------------------------------------------ATGEKVPAGATSV 315 (741)
T ss_pred EeecccccCCCCCEec---------------------------------------------------CCCCeeccCCEEc
Confidence 9999999999999999 3457899999999
Q ss_pred cCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCC
Q 001304 230 NTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE 306 (1104)
Q Consensus 230 ~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (1104)
+| .+.+.|+.+|.+|.++++.+ ..+.+++++++.+++++.++.+++++++++.+++++++. .
T Consensus 316 ~G-~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~--------------~ 380 (741)
T PRK11033 316 DR-LVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF--------------A 380 (741)
T ss_pred Cc-eEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------c
Confidence 98 69999999999999998764 556678999999999999998888887777766542211 1
Q ss_pred cchhhhhhhHHHHHHhhhccccchh----HHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecC
Q 001304 307 FPWYELLVIPLRFELLCSIMIPISI----KVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDK 382 (1104)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~~iP~~L----~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DK 382 (1104)
.+|...+..++ .+++.++|++| |+.+..+....+ ++++++|+.+.+|.|+++++|||||
T Consensus 381 ~~~~~~i~~a~---svlviacPcaL~latP~a~~~~l~~aa--------------r~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 381 APWQEWIYRGL---TLLLIGCPCALVISTPAAITSGLAAAA--------------RRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred CCHHHHHHHHH---HHHHHhchhhhhhhhHHHHHHHHHHHH--------------HCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 12333333333 25566778877 333333322221 2369999999999999999999999
Q ss_pred CCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHH
Q 001304 383 TGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEAL 462 (1104)
Q Consensus 383 TGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al 462 (1104)
|||||+|+|+|.++...+. .. ..+++...+. +. ..+.||.+.|+
T Consensus 444 TGTLT~g~~~v~~~~~~~~---------~~--------------~~~~l~~aa~---~e----------~~s~hPia~Ai 487 (741)
T PRK11033 444 TGTLTEGKPQVTDIHPATG---------IS--------------ESELLALAAA---VE----------QGSTHPLAQAI 487 (741)
T ss_pred CCCCcCCceEEEEEEecCC---------CC--------------HHHHHHHHHH---Hh----------cCCCCHHHHHH
Confidence 9999999999998754221 00 1122222221 11 12579999999
Q ss_pred HHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEE-EEEEeCCCCcEEEEecChHHhhhhhhccCCchh
Q 001304 463 VHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS-VVVKDCHSGNISLLSKGADEAILPYAHAGQQTR 541 (1104)
Q Consensus 463 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~ 541 (1104)
++++++.+.. +||.++++.+. .-++..-+|+.+ .-|+++.+.+ ..+
T Consensus 488 ~~~a~~~~~~-------------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~------~~~ 534 (741)
T PRK11033 488 VREAQVRGLA-------------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP------LAD 534 (741)
T ss_pred HHHHHhcCCC-------------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh------ccH
Confidence 9999876532 35666666653 112211134433 3478877644 124
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHH
Q 001304 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPET 621 (1104)
Q Consensus 542 ~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~ 621 (1104)
++.+.++++..+|+|++++| .|.+++|+++++|++|++++++
T Consensus 535 ~~~~~~~~~~~~g~~~v~va--------------------------------------~~~~~~g~i~l~d~~r~~a~~~ 576 (741)
T PRK11033 535 AFAGQINELESAGKTVVLVL--------------------------------------RNDDVLGLIALQDTLRADARQA 576 (741)
T ss_pred HHHHHHHHHHhCCCEEEEEE--------------------------------------ECCEEEEEEEEecCCchhHHHH
Confidence 45667788999999999999 4678999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchh
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 701 (1104)
|+.|+++|++++|+|||+..+|..+|+++||.
T Consensus 577 i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------------------------ 608 (741)
T PRK11033 577 ISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------------------------------------ 608 (741)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------------------------
Confidence 99999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhc
Q 001304 702 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781 (1104)
Q Consensus 702 l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~A 781 (1104)
.+++++|++|..+|+.+++. +.|+|+|||.||+|||++|||||+| |+....++++|
T Consensus 609 ----------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~-g~~~~~a~~~a 664 (741)
T PRK11033 609 ----------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAM-GSGTDVALETA 664 (741)
T ss_pred ----------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEe-cCCCHHHHHhC
Confidence 12457999999999999965 5899999999999999999999999 65555566799
Q ss_pred ceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHH
Q 001304 782 DYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 820 (1104)
Q Consensus 782 D~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~ 820 (1104)
|+++.+.++.... ++..||.++.|+++.+.|.+..|+++
T Consensus 665 divl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~ 704 (741)
T PRK11033 665 DAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIF 704 (741)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999876653333 46899999999999999888777653
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=2.6e-58 Score=556.68 Aligned_cols=492 Identities=18% Similarity=0.198 Sum_probs=366.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh---HhhcceEEEEEECC-eEEEEeccCCccceEEEEecCCcccceEEEEeccCCCcc
Q 001304 73 LIFIFAVSATKEAWDDYNRYLSD---KKANEKEVWVVKQG-IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~~---~~~n~~~~~V~r~g-~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~ 148 (1104)
+++++.++...+.++++|..+.. ...++.+++|+|+| +++++++++|+|||+|.|++||.|||||+|+ +|.
T Consensus 24 i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi-----~g~ 98 (556)
T TIGR01525 24 LLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI-----SGE 98 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE-----ecc
Confidence 33334444444555555444432 34567889999996 9999999999999999999999999999999 567
Q ss_pred EEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeeccee
Q 001304 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1104)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1104)
+.||||+|||||.|+.| ..++.+++||.+
T Consensus 99 ~~vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt~v 127 (556)
T TIGR01525 99 SEVDESALTGESMPVEK---------------------------------------------------KEGDEVFAGTIN 127 (556)
T ss_pred eEEeehhccCCCCCEec---------------------------------------------------CCcCEEeeceEE
Confidence 99999999999999998 345789999999
Q ss_pred ccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCC
Q 001304 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (1104)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1104)
.+| .++++|++||.+|.+|++.+ ..+.+++++++.+++++.++.++.++++++.++.++...
T Consensus 128 ~~g-~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------------- 192 (556)
T TIGR01525 128 GDG-SLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------------- 192 (556)
T ss_pred CCc-eEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 998 69999999999999998754 345677999999999998888877777766665432111
Q ss_pred CcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCC
Q 001304 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (1104)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 385 (1104)
.. ..+ ..++.++...+|++|++.+.++...... +|.++ ++++|+.+.+|.||+++++|||||||
T Consensus 193 --~~-~~~---~~~~~vlv~~~P~al~l~~~~~~~~~~~------~~~~~----gilvk~~~~le~l~~v~~i~fDKTGT 256 (556)
T TIGR01525 193 --AL-GAL---YRALAVLVVACPCALGLATPVAILVAIG------VAARR----GILIKGGDALEKLAKVKTVVFDKTGT 256 (556)
T ss_pred --cc-hHH---HHHHHHHhhccccchhehhHHHHHHHHH------HHHHC----CceecCchHHHHhhcCCEEEEeCCCC
Confidence 00 222 2233467778899997766666555543 33333 58999999999999999999999999
Q ss_pred CCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHH
Q 001304 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (1104)
Q Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~ 465 (1104)
||+|+|++.++...+... ....+++. +|..+. ....||.+.|++++
T Consensus 257 LT~~~~~v~~~~~~~~~~---------------------~~~~~~l~---~a~~~e----------~~~~hp~~~Ai~~~ 302 (556)
T TIGR01525 257 LTTGKPTVVDVEPLDDAS---------------------ISEEELLA---LAAALE----------QSSSHPLARAIVRY 302 (556)
T ss_pred CcCCceEEEEEEecCCCC---------------------ccHHHHHH---HHHHHh----------ccCCChHHHHHHHH
Confidence 999999999886532110 00112222 222222 12569999999999
Q ss_pred HHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHH
Q 001304 466 AAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545 (1104)
Q Consensus 466 a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~ 545 (1104)
+++.|..... + + -...++ .+.+...++ |. .-+..|+++.+ + . .........+
T Consensus 303 ~~~~~~~~~~--~-------------~-~~~~~~----~~gi~~~~~----g~-~~~~lg~~~~~-~-~-~~~~~~~~~~ 354 (556)
T TIGR01525 303 AKKRGLELPK--Q-------------E-DVEEVP----GKGVEATVD----GQ-EEVRIGNPRLL-E-L-AAEPISASPD 354 (556)
T ss_pred HHhcCCCccc--c-------------c-CeeEec----CCeEEEEEC----Ce-eEEEEecHHHH-h-h-cCCCchhhHH
Confidence 9887653210 0 0 000111 122222221 21 12334665544 1 1 1112233446
Q ss_pred HHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHH
Q 001304 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625 (1104)
Q Consensus 546 ~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l 625 (1104)
.+++++.+|+|++.+| .|.+++|.+.++|+++|+++++|+.|
T Consensus 355 ~~~~~~~~g~~~~~v~--------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L 396 (556)
T TIGR01525 355 LLNEGESQGKTVVFVA--------------------------------------VDGELLGVIALRDQLRPEAKEAIAAL 396 (556)
T ss_pred HHHHHhhCCcEEEEEE--------------------------------------ECCEEEEEEEecccchHhHHHHHHHH
Confidence 6778899999999998 46799999999999999999999999
Q ss_pred HHcC-CeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHH
Q 001304 626 RKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (1104)
Q Consensus 626 ~~aG-I~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 704 (1104)
+++| ++++|+|||+..++..+++++|+
T Consensus 397 ~~~g~i~v~ivTgd~~~~a~~i~~~lgi---------------------------------------------------- 424 (556)
T TIGR01525 397 KRAGGIKLVMLTGDNRSAAEAVAAELGI---------------------------------------------------- 424 (556)
T ss_pred HHcCCCeEEEEeCCCHHHHHHHHHHhCC----------------------------------------------------
Confidence 9999 99999999999999999999998
Q ss_pred HHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhccee
Q 001304 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (1104)
Q Consensus 705 ~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~v 784 (1104)
..+++++.|++|..+++.++..++.|+|+|||.||++|++.||+||++ |+....++..||++
T Consensus 425 -----------------~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~Ad~v 486 (556)
T TIGR01525 425 -----------------DEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM-GAGSDVAIEAADIV 486 (556)
T ss_pred -----------------CeeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe-CCCCHHHHHhCCEE
Confidence 134567899999999999999889999999999999999999999999 65555566699999
Q ss_pred cccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 785 IGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 785 l~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
+.+.++.... ++..||..+.|+++.+.|.+..|++..
T Consensus 487 i~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i 524 (556)
T TIGR01525 487 LLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524 (556)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9975554333 368999999999999999999888754
No 29
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=5.8e-57 Score=541.18 Aligned_cols=470 Identities=19% Similarity=0.230 Sum_probs=355.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh---hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccE
Q 001304 73 LIFIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVC 149 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~---~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~ 149 (1104)
+++++.++...+.++++|..+. ..++++++++|+|||+++++++++|+|||+|.|++||.|||||+++ +|.+
T Consensus 24 i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii-----~g~~ 98 (536)
T TIGR01512 24 LLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL-----SGTS 98 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE-----eCcE
Confidence 4444445555566666555443 3445788999999999999999999999999999999999999999 5679
Q ss_pred EEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceec
Q 001304 150 YVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR 229 (1104)
Q Consensus 150 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~ 229 (1104)
.||||+|||||.|+.|. .++.+|+||.+.
T Consensus 99 ~vdes~lTGEs~pv~k~---------------------------------------------------~g~~v~aGt~v~ 127 (536)
T TIGR01512 99 TVDESALTGESVPVEKA---------------------------------------------------PGDEVFAGAINL 127 (536)
T ss_pred EEEecccCCCCCcEEeC---------------------------------------------------CCCEEEeeeEEC
Confidence 99999999999999983 356899999999
Q ss_pred cCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCC
Q 001304 230 NTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE 306 (1104)
Q Consensus 230 ~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (1104)
+| .++++|+.||.+|.+|++.+ ..+.+++++++.+++++.++.++.++++++.++.++++.
T Consensus 128 ~G-~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 191 (536)
T TIGR01512 128 DG-VLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--------------- 191 (536)
T ss_pred Cc-eEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------
Confidence 98 69999999999999998755 345677999999999998888877776665555432110
Q ss_pred cchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCC
Q 001304 307 FPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTL 386 (1104)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTL 386 (1104)
.+...+ ...+.++..++|++|++++.++...... ++.+ +++++|+.+.+|++|+++++||||||||
T Consensus 192 -~~~~~~---~~~~svlv~~~P~aL~la~~~~~~~~~~------~~~k----~gilik~~~~le~l~~v~~i~fDKTGTL 257 (536)
T TIGR01512 192 -RWPFWV---YRALVLLVVASPCALVISAPAAYLSAIS------AAAR----HGILIKGGAALEALAKIKTVAFDKTGTL 257 (536)
T ss_pred -ccHHHH---HHHHHHHhhcCccccccchHHHHHHHHH------HHHH----CCeEEcCcHHHHhhcCCCEEEECCCCCC
Confidence 011122 2233467788999987666555554433 3333 3599999999999999999999999999
Q ss_pred CCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHH
Q 001304 387 TENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAA 466 (1104)
Q Consensus 387 T~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a 466 (1104)
|+|+|++.++... +++...+.+. ....||.+.|+++++
T Consensus 258 T~~~~~v~~~~~~-----------------------------~~l~~a~~~e-------------~~~~hp~~~Ai~~~~ 295 (536)
T TIGR01512 258 TTGRPKVVDVVPA-----------------------------EVLRLAAAAE-------------QASSHPLARAIVDYA 295 (536)
T ss_pred cCCceEEEEeeHH-----------------------------HHHHHHHHHh-------------ccCCCcHHHHHHHHH
Confidence 9999999886410 2222222111 125799999999999
Q ss_pred HhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHHH
Q 001304 467 AQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEA 546 (1104)
Q Consensus 467 ~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~ 546 (1104)
++.+ .+ +-...+| .+.+...+ +|+.+ ..|+++.+.+..
T Consensus 296 ~~~~-~~-------------------~~~~~~~----g~gi~~~~----~g~~~--~ig~~~~~~~~~------------ 333 (536)
T TIGR01512 296 RKRE-NV-------------------ESVEEVP----GEGVRAVV----DGGEV--RIGNPRSLEAAV------------ 333 (536)
T ss_pred HhcC-CC-------------------cceEEec----CCeEEEEE----CCeEE--EEcCHHHHhhcC------------
Confidence 7654 00 0001111 12222222 23322 347765442210
Q ss_pred HHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHH
Q 001304 547 VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLR 626 (1104)
Q Consensus 547 ~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~ 626 (1104)
...+..+|.+++.++ .|..++|.+.++|+++++++++|+.|+
T Consensus 334 ~~~~~~~~~~~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~ 375 (536)
T TIGR01512 334 GARPESAGKTIVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELK 375 (536)
T ss_pred CcchhhCCCeEEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHH
Confidence 115567788887776 578999999999999999999999999
Q ss_pred HcCC-eEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHH
Q 001304 627 KAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIA 705 (1104)
Q Consensus 627 ~aGI-~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~ 705 (1104)
++|+ +++|+|||+..++..+++++|+.
T Consensus 376 ~~Gi~~v~vvTgd~~~~a~~i~~~lgi~---------------------------------------------------- 403 (536)
T TIGR01512 376 ALGIEKVVMLTGDRRAVAERVARELGID---------------------------------------------------- 403 (536)
T ss_pred HcCCCcEEEEcCCCHHHHHHHHHHcCCh----------------------------------------------------
Confidence 9999 99999999999999999999982
Q ss_pred HHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecC-CchHHHhhhccee
Q 001304 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADYS 784 (1104)
Q Consensus 706 ~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g-~~~~~a~~~AD~v 784 (1104)
.+++++.|++|..+++.++..++.|+|+|||.||++|++.||+||++ | .....++..||++
T Consensus 404 -----------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~~ad~v 465 (536)
T TIGR01512 404 -----------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM-GASGSDVAIETADVV 465 (536)
T ss_pred -----------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe-CCCccHHHHHhCCEE
Confidence 23457789999999999999999999999999999999999999999 6 4444556699999
Q ss_pred cccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 785 IGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 785 l~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
+.+.++ +.. ++..||.++.++++.+.|.+..|++..
T Consensus 466 l~~~~l~~l~~-~i~~~r~~~~~i~~nl~~a~~~n~~~i 503 (536)
T TIGR01512 466 LLNDDLSRLPQ-AIRLARRTRRIVKQNVVIALGIILLLI 503 (536)
T ss_pred EECCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 965443 444 368999999999999999888886643
No 30
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-56 Score=516.97 Aligned_cols=494 Identities=19% Similarity=0.216 Sum_probs=375.0
Q ss_pred HHHHHHHHHHHhhh------hHhhcceEEEEEECCe-EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEe
Q 001304 81 ATKEAWDDYNRYLS------DKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVET 153 (1104)
Q Consensus 81 ~~~~~~~d~~~~~~------~~~~n~~~~~V~r~g~-~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vde 153 (1104)
.+..++|...++|+ +..+.+.++.++.+|+ .++|+.+.|++||+|.|.||++||+||+++ +|.++|||
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv-----~Gss~VDE 426 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV-----DGSSEVDE 426 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE-----eCceeech
Confidence 34456666666653 3455788999999997 899999999999999999999999999999 78899999
Q ss_pred ccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCce
Q 001304 154 AALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEW 233 (1104)
Q Consensus 154 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~ 233 (1104)
|.+|||+.|+.|+ .+..+..||.+.|| .
T Consensus 427 s~iTGEs~PV~Kk---------------------------------------------------~gs~ViaGsiN~nG-~ 454 (951)
T KOG0207|consen 427 SLITGESMPVPKK---------------------------------------------------KGSTVIAGSINLNG-T 454 (951)
T ss_pred hhccCCceecccC---------------------------------------------------CCCeeeeeeecCCc-e
Confidence 9999999999994 45689999999998 7
Q ss_pred EEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchh
Q 001304 234 ACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWY 310 (1104)
Q Consensus 234 ~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1104)
.+..++.+|.||.++++.+ .++..++|+|+.+|+++.++.++.+++.++++++|.+...... +| ...|.
T Consensus 455 l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~---~~-----~~~~~ 526 (951)
T KOG0207|consen 455 LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVF---KY-----PRSFF 526 (951)
T ss_pred EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccc---cC-----cchhh
Confidence 9999999999999998765 5677889999999999999999988888877776544332111 11 11222
Q ss_pred hhhhhHHHHHH-hhhccccchhHHHH----HHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCC
Q 001304 311 ELLVIPLRFEL-LCSIMIPISIKVSL----DLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (1104)
Q Consensus 311 ~~~~~~~~~~~-l~~~~iP~~L~v~l----~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 385 (1104)
..+..++.+.+ +++.++|++|.... -.+.+..+ .+++++|....+|.+.+++++.||||||
T Consensus 527 ~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA--------------~nGvLIKGge~LE~~hkv~tVvFDKTGT 592 (951)
T KOG0207|consen 527 DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGA--------------TNGVLIKGGEALEKAHKVKTVVFDKTGT 592 (951)
T ss_pred HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhh--------------hcceEEcCcHHHHHHhcCCEEEEcCCCc
Confidence 33333333322 56677888774332 22222332 2468999999999999999999999999
Q ss_pred CCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHH
Q 001304 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (1104)
Q Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~ 465 (1104)
||+|++++.++..-+.. -...+++...+ +.. -.++||...|++++
T Consensus 593 LT~G~~~V~~~~~~~~~----------------------~~~~e~l~~v~---a~E----------s~SeHPig~AIv~y 637 (951)
T KOG0207|consen 593 LTEGKPTVVDFKSLSNP----------------------ISLKEALALVA---AME----------SGSEHPIGKAIVDY 637 (951)
T ss_pred eecceEEEEEEEecCCc----------------------ccHHHHHHHHH---HHh----------cCCcCchHHHHHHH
Confidence 99999999998654321 01222222221 111 23679999999999
Q ss_pred HHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHH
Q 001304 466 AAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545 (1104)
Q Consensus 466 a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~ 545 (1104)
|+..+... +. -.++..-.|..+.+...+.+. ++- .+-|.-+.+...-. ...+++++
T Consensus 638 ak~~~~~~-----~~-----------~~~~~~~~~pg~g~~~~~~~~----~~~--i~iGN~~~~~r~~~--~~~~~i~~ 693 (951)
T KOG0207|consen 638 AKEKLVEP-----NP-----------EGVLSFEYFPGEGIYVTVTVD----GNE--VLIGNKEWMSRNGC--SIPDDILD 693 (951)
T ss_pred HHhccccc-----Cc-----------cccceeecccCCCcccceEEe----eeE--EeechHHHHHhcCC--CCchhHHH
Confidence 99876111 00 011122223333322222222 222 44466555543221 22456888
Q ss_pred HHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHH
Q 001304 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625 (1104)
Q Consensus 546 ~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l 625 (1104)
.+++-...|..+.++| -|.++.|+++++|++|+|+..+|+.|
T Consensus 694 ~~~~~e~~g~tvv~v~--------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~L 735 (951)
T KOG0207|consen 694 ALTESERKGQTVVYVA--------------------------------------VNGQLVGVFALEDQVRPDAALAVAEL 735 (951)
T ss_pred hhhhHhhcCceEEEEE--------------------------------------ECCEEEEEEEeccccchhHHHHHHHH
Confidence 8999999999999999 58899999999999999999999999
Q ss_pred HHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHH
Q 001304 626 RKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIA 705 (1104)
Q Consensus 626 ~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~ 705 (1104)
|+.||++.|+|||+..+|.++|+++|+
T Consensus 736 k~~Gi~v~mLTGDn~~aA~svA~~VGi----------------------------------------------------- 762 (951)
T KOG0207|consen 736 KSMGIKVVMLTGDNDAAARSVAQQVGI----------------------------------------------------- 762 (951)
T ss_pred HhcCceEEEEcCCCHHHHHHHHHhhCc-----------------------------------------------------
Confidence 999999999999999999999999996
Q ss_pred HHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceec
Q 001304 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (1104)
Q Consensus 706 ~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl 785 (1104)
..|+|++.|+||.++|+.+|+.+..|+|+|||.||+|+|.+|||||+| |....-|.++||+++
T Consensus 763 ----------------~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai-g~gs~vAieaADIVL 825 (951)
T KOG0207|consen 763 ----------------DNVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI-GAGSDVAIEAADIVL 825 (951)
T ss_pred ----------------ceEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee-ccccHHHHhhCCEEE
Confidence 468899999999999999999999999999999999999999999999 554444667999999
Q ss_pred ccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHH
Q 001304 786 GKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 820 (1104)
Q Consensus 786 ~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~ 820 (1104)
++.+....+ .+..+|++..|++..+.|.+.+|++-
T Consensus 826 mrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~ 861 (951)
T KOG0207|consen 826 MRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVG 861 (951)
T ss_pred EccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Confidence 987665544 36789999999999888888887763
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.7e-55 Score=529.96 Aligned_cols=469 Identities=19% Similarity=0.223 Sum_probs=352.2
Q ss_pred HHHHHHHHHHHHHhhh------hHhhcceEEEEEEC-CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEE
Q 001304 79 VSATKEAWDDYNRYLS------DKKANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYV 151 (1104)
Q Consensus 79 i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r~-g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~V 151 (1104)
+..+-+++|++.++|+ ..++.+.+++++|+ |.+++|+.++|+|||+|+|++||.|||||+++ +|.+.|
T Consensus 63 ~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~-----~g~~~v 137 (562)
T TIGR01511 63 FILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVI-----EGESEV 137 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEE-----ECceEE
Confidence 3344456666654443 34556789999985 66799999999999999999999999999999 677999
Q ss_pred EeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccC
Q 001304 152 ETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNT 231 (1104)
Q Consensus 152 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~ 231 (1104)
|||+|||||.|+.|+ .++.+|+||.+.+|
T Consensus 138 des~lTGEs~pv~k~---------------------------------------------------~gd~V~aGt~~~~g 166 (562)
T TIGR01511 138 DESLVTGESLPVPKK---------------------------------------------------VGDPVIAGTVNGTG 166 (562)
T ss_pred ehHhhcCCCCcEEcC---------------------------------------------------CCCEEEeeeEECCc
Confidence 999999999999983 45689999999998
Q ss_pred ceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcc
Q 001304 232 EWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFP 308 (1104)
Q Consensus 232 ~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (1104)
.+++.|+.||.+|.++++.+ ..+.+++++++.+++++.++.+++++++++.++.+
T Consensus 167 -~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~--------------------- 224 (562)
T TIGR01511 167 -SLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIW--------------------- 224 (562)
T ss_pred -eEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 79999999999999998765 44556799999999999988887776666555432
Q ss_pred hhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCC
Q 001304 309 WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTE 388 (1104)
Q Consensus 309 ~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~ 388 (1104)
...+ ...+.+++..+|++|++...++...... ++.+ .++++|+.+.+|.|+++++||||||||||+
T Consensus 225 -~~~~---~~~~svlvvacPcaL~la~p~a~~~~~~------~aa~----~gIlik~~~~lE~l~~v~~i~fDKTGTLT~ 290 (562)
T TIGR01511 225 -LFAL---EFAVTVLIIACPCALGLATPTVIAVATG------LAAK----NGVLIKDGDALERAANIDTVVFDKTGTLTQ 290 (562)
T ss_pred -HHHH---HHHHHHHHHhccchhhhHHHHHHHHHHH------HHHH----CCeEEcChHHHHHhhCCCEEEECCCCCCcC
Confidence 1112 2223366777888886655555444332 2222 359999999999999999999999999999
Q ss_pred cceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHh
Q 001304 389 NRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (1104)
Q Consensus 389 n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~ 468 (1104)
|+|++.++...+.. + ..+++.. |..+. ..+.||.+.|+++++++
T Consensus 291 g~~~v~~i~~~~~~---------------------~--~~~~l~~---aa~~e----------~~s~HPia~Ai~~~~~~ 334 (562)
T TIGR01511 291 GKPTVTDVHVFGDR---------------------D--RTELLAL---AAALE----------AGSEHPLAKAIVSYAKE 334 (562)
T ss_pred CCEEEEEEecCCCC---------------------C--HHHHHHH---HHHHh----------ccCCChHHHHHHHHHHh
Confidence 99999987532110 0 0122222 22111 12569999999999987
Q ss_pred cCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHHHHH
Q 001304 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVE 548 (1104)
Q Consensus 469 ~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~ 548 (1104)
.+..... ...+ +.+ ..+.+...+ +|+ -+..|+++.+.+.- .. +.
T Consensus 335 ~~~~~~~-------------~~~~---~~~----~g~Gi~~~~----~g~--~~~iG~~~~~~~~~---~~-------~~ 378 (562)
T TIGR01511 335 KGITLVE-------------VSDF---KAI----PGIGVEGTV----EGT--KIQLGNEKLLGENA---IK-------ID 378 (562)
T ss_pred cCCCcCC-------------CCCe---EEE----CCceEEEEE----CCE--EEEEECHHHHHhCC---CC-------CC
Confidence 7643210 0001 111 123333333 232 24568877653311 00 11
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHc
Q 001304 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (1104)
Q Consensus 549 ~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~a 628 (1104)
++.++|.+++.++ .|.+++|.++++|+++++++++|+.|++.
T Consensus 379 ~~~~~g~~~~~~~--------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~ 420 (562)
T TIGR01511 379 GKAEQGSTSVLVA--------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRR 420 (562)
T ss_pred hhhhCCCEEEEEE--------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHc
Confidence 2457899998887 68899999999999999999999999999
Q ss_pred CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHH
Q 001304 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (1104)
Q Consensus 629 GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~ 708 (1104)
|++++|+|||+..++..+++++|+.
T Consensus 421 Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------------------------------- 445 (562)
T TIGR01511 421 GIEPVMLTGDNRKTAKAVAKELGIN------------------------------------------------------- 445 (562)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------------------------------
Confidence 9999999999999999999999981
Q ss_pred HHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 709 ~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
+++++.|++|.++++.+++.++.|+|+|||.||++|++.||+||+| |.....++..||+++.+.
T Consensus 446 ---------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~-g~g~~~a~~~Advvl~~~ 509 (562)
T TIGR01511 446 ---------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI-GAGTDVAIEAADVVLMRN 509 (562)
T ss_pred ---------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe-CCcCHHHHhhCCEEEeCC
Confidence 3456789999999999999999999999999999999999999999 654444556899999854
Q ss_pred hh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 789 RF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 789 ~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
+. +.. ++..||..++++++.+.|.+..|++..
T Consensus 510 ~l~~l~~-~i~lsr~~~~~i~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 510 DLNDVAT-AIDLSRKTLRRIKQNLLWAFGYNVIAI 543 (562)
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 333 368999999999999999888887643
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=2.3e-54 Score=545.34 Aligned_cols=488 Identities=19% Similarity=0.206 Sum_probs=368.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhh------HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCcc
Q 001304 75 FIFAVSATKEAWDDYNRYLSD------KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1104)
Q Consensus 75 ~i~~i~~~~~~~~d~~~~~~~------~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~ 148 (1104)
+++++..+-+++|++-+.|+. .++.+++++|+|+|++++|+.++|+|||+|.|++||+|||||+++ +|.
T Consensus 291 ~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~-----~g~ 365 (834)
T PRK10671 291 MIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT-----QGE 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE-----Ece
Confidence 333444555677777665543 345688999999999999999999999999999999999999999 677
Q ss_pred EEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeeccee
Q 001304 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1104)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1104)
+.||||+|||||.|+.| ..++.+++||.+
T Consensus 366 ~~vdeS~lTGEs~pv~k---------------------------------------------------~~gd~V~aGt~~ 394 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQK---------------------------------------------------GEGDSVHAGTVV 394 (834)
T ss_pred EEEeehhhcCCCCCEec---------------------------------------------------CCCCEEEeccee
Confidence 99999999999999999 345689999999
Q ss_pred ccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCC
Q 001304 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (1104)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1104)
.+| .+.+.|+.+|.+|.++++.+ ..+..++++++..++++.++.+++++++++.++++++. . .
T Consensus 395 ~~G-~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~-~------------~ 460 (834)
T PRK10671 395 QDG-SVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF-G------------P 460 (834)
T ss_pred cce-eEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C------------C
Confidence 998 79999999999999998754 34556789999999999988888777776655543211 0 0
Q ss_pred CcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCC
Q 001304 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (1104)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 385 (1104)
...|...+..+ +.+++.++|++|+.+..++...... ++. +.++++|+.+.+|+||+++++|||||||
T Consensus 461 ~~~~~~~~~~a---~~vlv~acPcaL~la~p~a~~~~~~------~~a----~~gilvk~~~~le~l~~v~~v~fDKTGT 527 (834)
T PRK10671 461 APQIVYTLVIA---TTVLIIACPCALGLATPMSIISGVG------RAA----EFGVLVRDADALQRASTLDTLVFDKTGT 527 (834)
T ss_pred chHHHHHHHHH---HHHHHHhcccchhhhHHHHHHHHHH------HHH----HCCeEEecHHHHHhhcCCCEEEEcCCCc
Confidence 00122222222 3366778899887665555544433 233 2359999999999999999999999999
Q ss_pred CCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHH-HHhhhcccccccCCCCceeeecCCccHHHHHH
Q 001304 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLT-VMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (1104)
Q Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~ 464 (1104)
||+|+|++.++...+. .. ..+++. +.+++. .+.||.+.|+++
T Consensus 528 LT~g~~~v~~~~~~~~---------~~--------------~~~~l~~a~~~e~--------------~s~hp~a~Ai~~ 570 (834)
T PRK10671 528 LTEGKPQVVAVKTFNG---------VD--------------EAQALRLAAALEQ--------------GSSHPLARAILD 570 (834)
T ss_pred cccCceEEEEEEccCC---------CC--------------HHHHHHHHHHHhC--------------CCCCHHHHHHHH
Confidence 9999999988653210 00 011222 222221 257999999999
Q ss_pred HHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHH
Q 001304 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (1104)
Q Consensus 465 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (1104)
++...+.. ....++.+ | .+.+...+ +|+. +.+|+++.+.... ...+.+.
T Consensus 571 ~~~~~~~~---------------~~~~~~~~---~----g~Gv~~~~----~g~~--~~~G~~~~~~~~~---~~~~~~~ 619 (834)
T PRK10671 571 KAGDMTLP---------------QVNGFRTL---R----GLGVSGEA----EGHA--LLLGNQALLNEQQ---VDTKALE 619 (834)
T ss_pred HHhhCCCC---------------CcccceEe---c----ceEEEEEE----CCEE--EEEeCHHHHHHcC---CChHHHH
Confidence 88643210 00111111 0 11122221 3433 4569988764321 1234566
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHH
Q 001304 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (1104)
Q Consensus 545 ~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~ 624 (1104)
+.+++++.+|.+++.+| .|..++|+++++|++|++++++|+.
T Consensus 620 ~~~~~~~~~g~~~v~va--------------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~ 661 (834)
T PRK10671 620 AEITAQASQGATPVLLA--------------------------------------VDGKAAALLAIRDPLRSDSVAALQR 661 (834)
T ss_pred HHHHHHHhCCCeEEEEE--------------------------------------ECCEEEEEEEccCcchhhHHHHHHH
Confidence 77888899999999999 4567999999999999999999999
Q ss_pred HHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHH
Q 001304 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (1104)
Q Consensus 625 l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 704 (1104)
|++.|++++|+|||+..+|..+++++|+.
T Consensus 662 L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--------------------------------------------------- 690 (834)
T PRK10671 662 LHKAGYRLVMLTGDNPTTANAIAKEAGID--------------------------------------------------- 690 (834)
T ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHcCCC---------------------------------------------------
Confidence 99999999999999999999999999981
Q ss_pred HHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhccee
Q 001304 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (1104)
Q Consensus 705 ~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~v 784 (1104)
.+++++.|++|.++++.++..++.|+|+|||.||++|++.||+||+| |+....++++||++
T Consensus 691 ------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~-g~g~~~a~~~ad~v 751 (834)
T PRK10671 691 ------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM-GGGSDVAIETAAIT 751 (834)
T ss_pred ------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe-cCCCHHHHHhCCEE
Confidence 35567899999999999999999999999999999999999999999 77666677799999
Q ss_pred cccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 785 IGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 785 l~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
+.+.++-... ++..||..+.++++.+.+.+..|++..
T Consensus 752 l~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i 789 (834)
T PRK10671 752 LMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGI 789 (834)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9876654333 368999999999999999998887654
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-47 Score=415.40 Aligned_cols=458 Identities=22% Similarity=0.262 Sum_probs=329.8
Q ss_pred eEEEEEEC-CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhh
Q 001304 101 KEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179 (1104)
Q Consensus 101 ~~~~V~r~-g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~ 179 (1104)
..++++++ |.++.+++.+|+.||+|+++.||.||+||-++ +|..+||||++||||.|+.|++.-
T Consensus 104 ~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVI-----eG~asVdESAITGESaPViresGg---------- 168 (681)
T COG2216 104 TIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVI-----EGVASVDESAITGESAPVIRESGG---------- 168 (681)
T ss_pred HHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEE-----eeeeecchhhccCCCcceeeccCC----------
Confidence 35666766 89999999999999999999999999999999 788999999999999999996531
Q ss_pred ccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccccccc---CCCCC
Q 001304 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR---GIPEP 256 (1104)
Q Consensus 180 ~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~ 256 (1104)
+. ..+--||.+.+. |....++..--+|.+-++. ..++.
T Consensus 169 -------------------------------------D~-ssVtGgT~v~SD-~l~irita~pG~sFlDrMI~LVEgA~R 209 (681)
T COG2216 169 -------------------------------------DF-SSVTGGTRVLSD-WLKIRITANPGETFLDRMIALVEGAER 209 (681)
T ss_pred -------------------------------------Cc-ccccCCcEEeee-eEEEEEEcCCCccHHHHHHHHhhchhc
Confidence 11 225567888775 9999999988889887653 35566
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHH
Q 001304 257 KLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLD 336 (1104)
Q Consensus 257 k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~ 336 (1104)
+++|=|-.++-+...+.++.++ .+..+..+ . -|. ..... .. ...+.+++.+||...---++
T Consensus 210 ~KTPNEIAL~iLL~~LTliFL~--~~~Tl~p~--a-------~y~---~g~~~-~i----~~LiALlV~LIPTTIGgLLs 270 (681)
T COG2216 210 QKTPNEIALTILLSGLTLIFLL--AVATLYPF--A-------IYS---GGGAA-SV----TVLVALLVCLIPTTIGGLLS 270 (681)
T ss_pred cCChhHHHHHHHHHHHHHHHHH--HHHhhhhH--H-------HHc---CCCCc-CH----HHHHHHHHHHhcccHHHHHH
Confidence 6788777666544333222111 11111100 0 010 00011 11 11123677888885422222
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhh
Q 001304 337 LVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGL 416 (1104)
Q Consensus 337 l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 416 (1104)
..-..++- ++ ...++..++..++|..|.||++..|||||+|-|+=.-.++...+
T Consensus 271 AIGIAGMd------Rv----~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~---------------- 324 (681)
T COG2216 271 AIGIAGMD------RV----TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP---------------- 324 (681)
T ss_pred Hhhhhhhh------Hh----hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC----------------
Confidence 11111100 22 22347899999999999999999999999999864433322111
Q ss_pred hhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEE
Q 001304 417 LNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILE 496 (1104)
Q Consensus 417 ~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~ 496 (1104)
.-+..++..+..+++- .-+.|.-..+++.|++.|+....+.. -....
T Consensus 325 -------gv~~~~la~aa~lsSl-------------~DeTpEGrSIV~LA~~~~~~~~~~~~-------------~~~~~ 371 (681)
T COG2216 325 -------GVSEEELADAAQLASL-------------ADETPEGRSIVELAKKLGIELREDDL-------------QSHAE 371 (681)
T ss_pred -------CCCHHHHHHHHHHhhh-------------ccCCCCcccHHHHHHHhccCCCcccc-------------cccce
Confidence 1123344444444331 12457788999999998854422111 00235
Q ss_pred EeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc--CCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHH
Q 001304 497 TLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWS 574 (1104)
Q Consensus 497 ~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~--~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~ 574 (1104)
.+||+.+.|++.+-... + .-+-|||.+.+...... +..+++++...++.++.|-.+|+++
T Consensus 372 fvpFtA~TRmSGvd~~~---~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~------------- 433 (681)
T COG2216 372 FVPFTAQTRMSGVDLPG---G--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV------------- 433 (681)
T ss_pred eeecceecccccccCCC---C--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE-------------
Confidence 67999888766665542 2 45779999999998874 3357889999999999999999999
Q ss_pred HHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 575 LMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 575 ~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
.|-+++|++.++|-+++|.+|-+.+||+.|||.+|+||||+.||..||.+.|+.
T Consensus 434 -------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD- 487 (681)
T COG2216 434 -------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD- 487 (681)
T ss_pred -------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch-
Confidence 688999999999999999999999999999999999999999999999999982
Q ss_pred CCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHH
Q 001304 655 PEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKA 734 (1104)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~ 734 (1104)
...++++|++|.
T Consensus 488 --------------------------------------------------------------------dfiAeatPEdK~ 499 (681)
T COG2216 488 --------------------------------------------------------------------DFIAEATPEDKL 499 (681)
T ss_pred --------------------------------------------------------------------hhhhcCChHHHH
Confidence 123578999999
Q ss_pred HHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH-HHhhhhhhhh
Q 001304 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYN 804 (1104)
Q Consensus 735 ~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~ 804 (1104)
.+|+.-|..|+.|+|+|||.||+|+|.+||||+|| |.|+||++ ++++|=.|-+.-+.+ ++.-|+....
T Consensus 500 ~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM--NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 500 ALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM--NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred HHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh--ccccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 99999999999999999999999999999999999 66777776 889988876654333 2345666554
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=99.96 E-value=2.4e-28 Score=263.94 Aligned_cols=222 Identities=24% Similarity=0.398 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhc---ceE-EEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCcc
Q 001304 73 LIFIFAVSATKEAWDDYNRYLSDKKAN---EKE-VWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~~~~~n---~~~-~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~ 148 (1104)
++++++++.+.+.++++|+++..++++ +.+ ++|+|||++++++|+||+|||||+|++||.+||||++++ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 456677888889999999988877654 444 999999999999999999999999999999999999995 377
Q ss_pred EEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeeccee
Q 001304 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1104)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1104)
++||||+||||+.|+.|.+. +++.+|++++||.+
T Consensus 78 ~~vd~s~ltGes~pv~k~~~----------------------------------------------~~~~~~~i~~Gs~v 111 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL----------------------------------------------PLNPGNIIFAGSIV 111 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS----------------------------------------------CCCTTTEE-TTEEE
T ss_pred cccccccccccccccccccc----------------------------------------------cccccchhhccccc
Confidence 99999999999999999532 23678999999999
Q ss_pred ccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCC
Q 001304 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (1104)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1104)
.+| +++++|++||.+|+++++.. ..+.+++++++.++++...+.++.+++++++.+++..+ ..
T Consensus 112 ~~g-~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 177 (230)
T PF00122_consen 112 VSG-WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN-------------DS 177 (230)
T ss_dssp EEE-EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG-------------ST
T ss_pred ccc-ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec-------------cc
Confidence 966 99999999999999998755 44556799999999999988887777776666543321 01
Q ss_pred CcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCcccccccccccc
Q 001304 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 371 (1104)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~ 371 (1104)
...+...+ ..++.++..++|++|++.++++...++..+ .+. ++.+|+++++|+
T Consensus 178 ~~~~~~~~---~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~------~~~----~i~v~~~~a~E~ 230 (230)
T PF00122_consen 178 GISFFKSF---LFAISLLIVLIPCALPLALPLSLAIAARRL------AKN----GIIVKNLSALEA 230 (230)
T ss_dssp TCHCCHHH---HHHHHHHHHHS-TTHHHHHHHHHHHHHHHH------HHT----TEEESSTTHHHH
T ss_pred cccccccc---ccccceeeeecccceeehHHHHHHHHHHHH------HHC----CEEEeCcccccC
Confidence 22333333 334457889999999999999888887643 332 488999998884
No 35
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.86 E-value=8.9e-22 Score=210.57 Aligned_cols=97 Identities=31% Similarity=0.499 Sum_probs=91.2
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHH
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1104)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 78999999999999999999999999999999999999999999999999981
Q ss_pred HHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc--ChhhH--HHHHHHHHhcCCeEEEEcCCccC
Q 001304 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQK--AQLVELLKSCDYRTLAIGDGGND 756 (1104)
Q Consensus 681 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--sP~qK--~~iV~~lk~~~~~v~~iGDG~ND 756 (1104)
+..+++++ +|++| .++++.++..++.|+|+|||.||
T Consensus 168 ----------------------------------------~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD 207 (215)
T PF00702_consen 168 ----------------------------------------DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVND 207 (215)
T ss_dssp ----------------------------------------SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGH
T ss_pred ----------------------------------------cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHH
Confidence 24688999 99999 99999999666799999999999
Q ss_pred hhhhhhcC
Q 001304 757 VRMIQKAD 764 (1104)
Q Consensus 757 ~~ml~~Ad 764 (1104)
++|+++||
T Consensus 208 ~~al~~Ag 215 (215)
T PF00702_consen 208 APALKAAG 215 (215)
T ss_dssp HHHHHHSS
T ss_pred HHHHHhCc
Confidence 99999997
No 36
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.50 E-value=2.1e-14 Score=129.33 Aligned_cols=89 Identities=31% Similarity=0.402 Sum_probs=71.5
Q ss_pred hhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeC
Q 001304 435 AVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 514 (1104)
Q Consensus 435 alc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~ 514 (1104)
++||++....+++.......|+|+|.||+.++.+.|.... ..+.+..+++++++||||+||||+|+++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~S~rK~msvv~~-- 68 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFDSERKRMSVVVR-- 68 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccCcccceeEEEEe--
Confidence 5899988765544433226899999999999999965332 1345678999999999999999999998
Q ss_pred CCCcEEEEecChHHhhhhhhc
Q 001304 515 HSGNISLLSKGADEAILPYAH 535 (1104)
Q Consensus 515 ~~~~~~l~~KGa~e~i~~~~~ 535 (1104)
+++.+++|+|||||.|+++|+
T Consensus 69 ~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 69 NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred CCCEEEEEcCCChHHHHHhcC
Confidence 245688899999999999996
No 37
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.46 E-value=3.5e-13 Score=122.31 Aligned_cols=126 Identities=25% Similarity=0.401 Sum_probs=107.4
Q ss_pred cEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHH
Q 001304 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 602 l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1104)
+...+.++---++-++++++|++|++. +++.++|||..-+....|.-.|+-.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--------------------------- 70 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--------------------------- 70 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce---------------------------
Confidence 567788888889999999999999999 9999999999999999999999621
Q ss_pred HccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhh
Q 001304 682 TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ 761 (1104)
Q Consensus 682 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~ 761 (1104)
-.+++...|+.|+.+++.|++.++.|+|+|||+||.+||+
T Consensus 71 ----------------------------------------~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr 110 (152)
T COG4087 71 ----------------------------------------ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALR 110 (152)
T ss_pred ----------------------------------------eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhh
Confidence 2466778899999999999999999999999999999999
Q ss_pred hcCceEEecCCchH--HHhhhcceecccchhhHHHH
Q 001304 762 KADIGVGISGREGL--QAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 762 ~AdvGIam~g~~~~--~a~~~AD~vl~~f~~l~~ll 795 (1104)
+||+||..-++++. .+..+||+++.+-.-+..++
T Consensus 111 ~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 111 EADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred hcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999966465543 34468999998866655543
No 38
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.19 E-value=1.8e-10 Score=127.73 Aligned_cols=182 Identities=20% Similarity=0.292 Sum_probs=110.9
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC-----CCCeEEEe--cCC------
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----PKGQLLSI--DGK------ 667 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~-----~~~~~~~~--~~~------ 667 (1104)
|.+|+.- ..++.+.+.++|++++++|++++++|||+...+..+.+++++..+. .+|..+.- ++.
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 4555532 2358889999999999999999999999999999999999974321 12222221 221
Q ss_pred -cHHHHHHHHHHHHHHccc------------cC-C-------------------------CCCce--EEEEcc-hhHHHH
Q 001304 668 -TEDEVCRSLERVLLTMRI------------TT-S-------------------------EPKDV--AFVVDG-WALEIA 705 (1104)
Q Consensus 668 -~~~~~~~~~~~~~~~~~~------------~~-~-------------------------~~~~~--~lvi~g-~~l~~~ 705 (1104)
+.+.+.. +.+..+.... .. . ..... .++.+. +.++..
T Consensus 88 l~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 166 (270)
T PRK10513 88 LSYDDYLY-LEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAA 166 (270)
T ss_pred CCHHHHHH-HHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHH
Confidence 1122221 1111111000 00 0 00000 111111 122222
Q ss_pred HHHHHHHHH-hHhhhccceeeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHh
Q 001304 706 LKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778 (1104)
Q Consensus 706 ~~~~~~~f~-~l~~~~~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~ 778 (1104)
.+.+.+.+. .+.......-+.+++|. +|+..++.+.+. .+.|+++|||.||++||+.|++|||| +|+..++|
T Consensus 167 ~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~NA~~~vK 245 (270)
T PRK10513 167 IARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM-GNAIPSVK 245 (270)
T ss_pred HHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe-cCccHHHH
Confidence 222222221 11112223346788887 799999988762 36799999999999999999999999 89999999
Q ss_pred hhcceeccc
Q 001304 779 RAADYSIGK 787 (1104)
Q Consensus 779 ~~AD~vl~~ 787 (1104)
+.||+|..+
T Consensus 246 ~~A~~vt~~ 254 (270)
T PRK10513 246 EVAQFVTKS 254 (270)
T ss_pred HhcCeeccC
Confidence 999999864
No 39
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.18 E-value=8e-11 Score=122.22 Aligned_cols=166 Identities=13% Similarity=0.162 Sum_probs=113.1
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheee-c
Q 001304 837 SLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA-Y 915 (1104)
Q Consensus 837 ~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 915 (1104)
.++++.|++|+|+++|.+|++++++| ++++++|++||+ .+++.+++.+.+......|++++++.++..+.... +
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e--~~~~~im~r~Pr---~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFE--PPDPDIMKRPPR---DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGS--S-STTGGGS------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcC--cchhhhhhcccc---ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 46899999999999999999998988 589999999994 78889999999888877898888877766544332 2
Q ss_pred cccc---------ceeeeehhhhHHHHHHHHhhhhccc-cch---HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Q 001304 916 EKSE---------MEEVSMVALSGCIWLQAFVVALETN-SFT---VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFR 982 (1104)
Q Consensus 916 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~ 982 (1104)
+... .+|+.+.+++.+.+++.+.++...+ .|. ...+..+++++++.++++.++.++|..+. .++
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~---~f~ 153 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNR---IFG 153 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHH---HST
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHh---hhc
Confidence 2211 2333444444455555556655332 232 34567777778888888888888887553 344
Q ss_pred hcc-CHHHHHHHHHHHHHHHHHHHHHHHH
Q 001304 983 LCS-QPSYWITMFLIVAAGMGPIVALKYF 1010 (1104)
Q Consensus 983 ~~~-~~~~w~~ill~~~~~llp~~i~k~~ 1010 (1104)
+.+ +...|+.+++..++.++..++.|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 433 7889988888888888888888864
No 40
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.17 E-value=2.3e-10 Score=126.94 Aligned_cols=173 Identities=20% Similarity=0.189 Sum_probs=106.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEE-ecC-------CcHHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDG-------KTEDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~ 682 (1104)
.+.+.++++|++++++|++++++|||+...+..+..++++..+ ..+|..+. .++ -+.+.+...++.....
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999997432 11122222 112 1122222222111000
Q ss_pred -cc--c---------cC-------------------------CCCCceEEEEcchhHHHHHHHHHHHHHh-Hhhhcccee
Q 001304 683 -MR--I---------TT-------------------------SEPKDVAFVVDGWALEIALKHYRKAFTE-LAILSRTAI 724 (1104)
Q Consensus 683 -~~--~---------~~-------------------------~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~~~i 724 (1104)
.. . .. ....+..+..+.+.++.+.+.+.+.|.. +.......-
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00 0 00 0000111111222333333333333321 111122234
Q ss_pred eeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcce--ecc
Q 001304 725 CCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY--SIG 786 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~--vl~ 786 (1104)
+.+++|. +|+..++.+.+. .+.|+++|||.||++||+.|+.|||| ||+..++|++||+ ++.
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~~vK~~A~~~~v~~ 247 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMPQLRAELPHLPVIG 247 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChHHHHHhCCCCeecC
Confidence 6788888 699999988762 36799999999999999999999999 9999999999986 554
No 41
>PRK10976 putative hydrolase; Provisional
Probab=99.10 E-value=6.2e-10 Score=123.19 Aligned_cols=174 Identities=22% Similarity=0.226 Sum_probs=105.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEE-ecCCc-------HHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGKT-------EDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~ 682 (1104)
.+.+.+.++|++++++|++++++|||+...+..+..++++..+ ..+|.++. .++.. .+.+.+.++...+.
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 4888999999999999999999999999999999999987432 11122222 12211 11111111111000
Q ss_pred --cc--cc--------CC-----------------------CCCc-eE-EEEc--chhHHHHHHHHHHHHHh-Hhhhccc
Q 001304 683 --MR--IT--------TS-----------------------EPKD-VA-FVVD--GWALEIALKHYRKAFTE-LAILSRT 722 (1104)
Q Consensus 683 --~~--~~--------~~-----------------------~~~~-~~-lvi~--g~~l~~~~~~~~~~f~~-l~~~~~~ 722 (1104)
.. .. .. .... .. ++.. .+.++.+.+.+.+.+.. +......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 178 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFST 178 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeC
Confidence 00 00 00 0000 01 1111 12222222233333321 2111222
Q ss_pred eeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcc--eeccc
Q 001304 723 AICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD--YSIGK 787 (1104)
Q Consensus 723 ~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD--~vl~~ 787 (1104)
.-+.+++|. +|+..++.+.+ . .+.|+++|||.||++||+.|+.|||| +|+..++|+.|| ++..+
T Consensus 179 ~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~~vK~~A~~~~v~~~ 250 (266)
T PRK10976 179 LTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQRLKDLLPELEVIGS 250 (266)
T ss_pred CceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcHHHHHhCCCCeeccc
Confidence 346788887 69999998876 2 36799999999999999999999999 999999999887 66653
No 42
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.10 E-value=5.7e-10 Score=123.30 Aligned_cols=167 Identities=25% Similarity=0.386 Sum_probs=110.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC--------------cHHHHHHHHHHH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK--------------TEDEVCRSLERV 679 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 679 (1104)
+.+.++++|+++++.|+++.++|||+...+..+.+++++..+ ++..+|. +.+.+....+ .
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~-----~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~-~ 94 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGP-----LITFNGALIYNGGELLFQKPLSREDVEELLE-L 94 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCcc-----EEEeCCeEEecCCcEEeeecCCHHHHHHHHH-H
Confidence 889999999999999999999999999999999999998652 3333332 1222222221 1
Q ss_pred HHHc-----cccCC--------C----------------------CC---ceEEEEcchhHHHHHHHHHHHHHhHhh--h
Q 001304 680 LLTM-----RITTS--------E----------------------PK---DVAFVVDGWALEIALKHYRKAFTELAI--L 719 (1104)
Q Consensus 680 ~~~~-----~~~~~--------~----------------------~~---~~~lvi~g~~l~~~~~~~~~~f~~l~~--~ 719 (1104)
.... ..... . .. ...+..+.+.+....+.+.+.+..... .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 174 (264)
T COG0561 95 LEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVS 174 (264)
T ss_pred HHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEE
Confidence 1111 00000 0 00 012222234444544445555442211 2
Q ss_pred ccceeeeccChh--hHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 720 SRTAICCRVTPS--QKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 720 ~~~~i~~r~sP~--qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.....+.+++|. +|+..++.+.+ .| +.|+++||+.||++||+.|+.|||| ||+...+++.||++...
T Consensus 175 ~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~~k~~A~~vt~~ 247 (264)
T COG0561 175 SSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEELKELADYVTTS 247 (264)
T ss_pred EcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHHHHhhCCcccCC
Confidence 222333788887 79999998876 33 4699999999999999999999999 88888888999977553
No 43
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.05 E-value=1.7e-09 Score=118.45 Aligned_cols=171 Identities=20% Similarity=0.313 Sum_probs=117.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC---------------cHHHHHHHH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------------TEDEVCRSL 676 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~---------------~~~~~~~~~ 676 (1104)
..+.+++.++|++++++|++++++|||.+..+..+..++++..+ .+..+|. ..+.+...+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~-----~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~ 88 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDY-----FICSNGALIDDPKGKILYEKPIDSDDVKKIL 88 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSE-----EEEGGGTEEEETTTEEEEEESB-HHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhh-----hcccccceeeecccccchhhheeccchhhee
Confidence 34778999999999999999999999999999999999997522 2222222 222232222
Q ss_pred HHHHHH-ccc----------c----------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHhH-
Q 001304 677 ERVLLT-MRI----------T----------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTEL- 716 (1104)
Q Consensus 677 ~~~~~~-~~~----------~----------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l- 716 (1104)
+..... +.. . .....++.+..+...++.+.+++.+.+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~ 168 (254)
T PF08282_consen 89 KYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLI 168 (254)
T ss_dssp HHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTE
T ss_pred ehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcce
Confidence 222211 000 0 001122333445556666666677766543
Q ss_pred hhhccceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 717 AILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 717 ~~~~~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
.......-+.+++|. .|+..++.+.+ ..+.++++||+.||.+||+.|+.||+| +++...+++.||++...-
T Consensus 169 ~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~k~~a~~i~~~~ 245 (254)
T PF08282_consen 169 DVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPELKKAADYITPSN 245 (254)
T ss_dssp EEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHHHHHSSEEESSG
T ss_pred eEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHHHHhCCEEecCC
Confidence 333344566788886 69999998876 246899999999999999999999999 888888999999988753
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.05 E-value=1.9e-09 Score=116.58 Aligned_cols=172 Identities=20% Similarity=0.216 Sum_probs=103.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEec--CC-----cHHHHHHHHHHHHHHcc
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID--GK-----TEDEVCRSLERVLLTMR 684 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~ 684 (1104)
+.+.+.++|++++++|++++++|||+...+..+++.+|+..+ ..++..+... +. ..+.....++.......
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 788999999999999999999999999999999999987432 1112222211 11 11122222222111110
Q ss_pred c-----cCC--CCCceEE-EEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhh--HHHHHHHHHhc----CCeEEEE
Q 001304 685 I-----TTS--EPKDVAF-VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSC----DYRTLAI 750 (1104)
Q Consensus 685 ~-----~~~--~~~~~~l-vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~q--K~~iV~~lk~~----~~~v~~i 750 (1104)
. ... ......+ +......+...+.+. .+..-........+.++.|.. |+..++.+.+. ...++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLE-ELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHH-HcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 0 000 0001111 112222222222111 111000111122356777774 99988888652 3579999
Q ss_pred cCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 751 GDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
|||.||++|++.|++||+| +|+..++++.||++..+
T Consensus 180 GD~~NDi~m~~~ag~~vam-~Na~~~vk~~a~~v~~~ 215 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAV-ANADEELKEAADYVTEK 215 (230)
T ss_pred CCchhhHHHHHhcCceEEe-cCccHHHHHhcceEecC
Confidence 9999999999999999999 88888899999998864
No 45
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.04 E-value=1.1e-06 Score=100.02 Aligned_cols=254 Identities=16% Similarity=0.219 Sum_probs=156.6
Q ss_pred HHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH------
Q 001304 596 QRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------ 669 (1104)
Q Consensus 596 ~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~------ 669 (1104)
.+.-.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-.+.....-+|.++||...... -+.+.....
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNC--HISLa~~~d~Pg~e~ 886 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNC--HISLAEEEDAPGREA 886 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccce--eEEeccCCCCCcccC
Confidence 334467899999999999999999999999999999999999999999999999999765322 222211100
Q ss_pred ----HH-HH--HHHHHHHHHccccCCCCC----------------------ceEEEEcchhHHHHHHHHHHHHHhHhhhc
Q 001304 670 ----DE-VC--RSLERVLLTMRITTSEPK----------------------DVAFVVDGWALEIALKHYRKAFTELAILS 720 (1104)
Q Consensus 670 ----~~-~~--~~~~~~~~~~~~~~~~~~----------------------~~~lvi~g~~l~~~~~~~~~~f~~l~~~~ 720 (1104)
+. .. ..+.+.++.+..++.+.. +++-.-+-..|.....+.+.|+.++..+.
T Consensus 887 ~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVP 966 (1354)
T KOG4383|consen 887 GPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVP 966 (1354)
T ss_pred CCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcc
Confidence 00 00 011111221111110000 00000000111111122233333333222
Q ss_pred -cceeeeccChhhHHHHHHHHHhcCCeEEEEcCCcc--ChhhhhhcCceEEecCCchH-------------HHhhhcc--
Q 001304 721 -RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGN--DVRMIQKADIGVGISGREGL-------------QAARAAD-- 782 (1104)
Q Consensus 721 -~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~N--D~~ml~~AdvGIam~g~~~~-------------~a~~~AD-- 782 (1104)
-...|.+++|+.--+.++.+|+.|++|++.|...| ..-.+-+||++|++-.-+.. ..+++.|
T Consensus 967 LLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandgl 1046 (1354)
T KOG4383|consen 967 LLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGL 1046 (1354)
T ss_pred eeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCC
Confidence 14578999999999999999999999999999988 44456889999987222111 0122233
Q ss_pred --eec--------ccchh-----hHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHH
Q 001304 783 --YSI--------GKFRF-----LKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMA 846 (1104)
Q Consensus 783 --~vl--------~~f~~-----l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~ 846 (1104)
..+ .+|++ ++.. +++..|....-+++..+|.++..+++..++++-.++.. +++|+..+++|
T Consensus 1047 splQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~L---P~i~s~sdii~ 1123 (1354)
T KOG4383|consen 1047 SPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFL---PIIFSHSDIIL 1123 (1354)
T ss_pred CceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc---cchhccchHHH
Confidence 111 12332 3333 45778888888889999999988888887777655432 45688888888
Q ss_pred HHHHhhhh
Q 001304 847 YNVFYTSI 854 (1104)
Q Consensus 847 ~nl~~~~l 854 (1104)
...+...+
T Consensus 1124 lScfc~Pl 1131 (1354)
T KOG4383|consen 1124 LSCFCIPL 1131 (1354)
T ss_pred HHHHHHHH
Confidence 77655433
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.98 E-value=3.3e-09 Score=113.34 Aligned_cols=171 Identities=17% Similarity=0.220 Sum_probs=104.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEecCCcH-------HHHHHHHHHHHHHc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTE-------DEVCRSLERVLLTM 683 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 683 (1104)
++.+++.++|++|+++|+++.++||+.+..+..+++.+++..+ ..++.++...+... ..............
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999987533 11121222211110 00000000000000
Q ss_pred cccC-CC-CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCcc
Q 001304 684 RITT-SE-PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGN 755 (1104)
Q Consensus 684 ~~~~-~~-~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~N 755 (1104)
.... .. .....+..+....+...+.+.+ ..+.... ...+..++|. +|+..++.+.+ . ...++++||+.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~N 174 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEN 174 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 0000 00 1112223344443333332222 1111111 1234566665 79999988865 2 346999999999
Q ss_pred ChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 756 DVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 756 D~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
|.+|++.|++|++| +|+.+++++.||++..+
T Consensus 175 D~~ml~~ag~~vam-~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 175 DIDLFRVVGFKVAV-ANADDQLKEIADYVTSN 205 (215)
T ss_pred HHHHHHhCCCeEEc-CCccHHHHHhCCEEcCC
Confidence 99999999999999 88888899999999863
No 47
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.96 E-value=8.4e-09 Score=111.09 Aligned_cols=168 Identities=17% Similarity=0.232 Sum_probs=101.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH---------------HH-HHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE---------------DE-VCRSL 676 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~---------------~~-~~~~~ 676 (1104)
.+.+.+.++|++++++|++++++|||+...+..+++.+|+..+ ++..+|... .. .....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~-----~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDP-----VIAENGGEISYNEGMDDIFLAYLEEEWFLDIV 89 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCe-----EEEecCcEEEeCCCCceEEecccCHHHHHHHH
Confidence 4778899999999999999999999999999999999985322 222232210 00 00001
Q ss_pred HHHH---HHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeE
Q 001304 677 ERVL---LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRT 747 (1104)
Q Consensus 677 ~~~~---~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v 747 (1104)
.... ...............+......+.. ....+.+..-........+.++.|. +|+..++.+.+ . .+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~ 168 (225)
T TIGR01482 90 IAKTFPFSRLKVQYPRRASLVKMRYGIDVDTV-REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGET 168 (225)
T ss_pred HhcccchhhhccccccccceEEEeecCCHHHH-HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHE
Confidence 1000 0000000011111122222122211 1122222110001112346677775 79988888765 2 3679
Q ss_pred EEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 748 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 748 ~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
+++||+.||++|++.|++|++| +|+...++..||+|..+
T Consensus 169 i~~GD~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 169 LVCGDSENDIDLFEVPGFGVAV-ANAQPELKEWADYVTES 207 (225)
T ss_pred EEECCCHhhHHHHHhcCceEEc-CChhHHHHHhcCeecCC
Confidence 9999999999999999999999 88888899999998753
No 48
>PLN02887 hydrolase family protein
Probab=98.95 E-value=8.5e-09 Score=123.35 Aligned_cols=63 Identities=29% Similarity=0.381 Sum_probs=55.2
Q ss_pred eeeccChh--hHHHHHHHHHhc-C---CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 724 ICCRVTPS--QKAQLVELLKSC-D---YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~-~---~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.+.+++|. +|+..++.+.+. | +.|++||||.||++||+.|++|||| ||+..++|+.||+|..+
T Consensus 497 ~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM-gNA~eeVK~~Ad~VT~s 565 (580)
T PLN02887 497 DMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL-SNGAEKTKAVADVIGVS 565 (580)
T ss_pred cEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe-CCCCHHHHHhCCEEeCC
Confidence 46788887 699999988763 3 5799999999999999999999999 99999999999998864
No 49
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.93 E-value=1.5e-08 Score=112.48 Aligned_cols=172 Identities=19% Similarity=0.192 Sum_probs=100.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEE---------ecCCcHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS---------IDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 681 (1104)
.+.+.+.++|++++++|++++++|||++..+..+++++++..+ ..+|.++. -..-+.+.+...++. ..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~-~~ 98 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPVQQALQVIEM-LD 98 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCHHHHHHHHHH-HH
Confidence 4788999999999999999999999999999999999987432 01111221 111112222222211 11
Q ss_pred Hcccc------------CC----------------------------------CCCceEEEEcch---hHHHHHHHHHHH
Q 001304 682 TMRIT------------TS----------------------------------EPKDVAFVVDGW---ALEIALKHYRKA 712 (1104)
Q Consensus 682 ~~~~~------------~~----------------------------------~~~~~~lvi~g~---~l~~~~~~~~~~ 712 (1104)
..... .. ......++.... .++...+.+.++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 178 (272)
T PRK10530 99 EHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE 178 (272)
T ss_pred hCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh
Confidence 10000 00 000011112111 111222222222
Q ss_pred HHhHhhhccceeeeccChh--hHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecc
Q 001304 713 FTELAILSRTAICCRVTPS--QKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 786 (1104)
Q Consensus 713 f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~ 786 (1104)
+. +.......-+.+++|. .|+..++.+.+ .| +.+++|||+.||++|++.|++||+| |++..+++..||++..
T Consensus 179 ~~-~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~~lk~~Ad~v~~ 256 (272)
T PRK10530 179 LG-LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADDAVKARADLVIG 256 (272)
T ss_pred cC-ceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchHHHHHhCCEEEe
Confidence 11 1110011123466665 69988887654 33 5799999999999999999999999 7888888889999886
Q ss_pred c
Q 001304 787 K 787 (1104)
Q Consensus 787 ~ 787 (1104)
+
T Consensus 257 ~ 257 (272)
T PRK10530 257 D 257 (272)
T ss_pred c
Confidence 4
No 50
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.86 E-value=1.9e-08 Score=111.35 Aligned_cols=170 Identities=16% Similarity=0.194 Sum_probs=97.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC-C--CCCCeEEEec--------------CCcHHHHHHHH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSID--------------GKTEDEVCRSL 676 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~-~--~~~~~~~~~~--------------~~~~~~~~~~~ 676 (1104)
+.+.++++|++|+++||+++++|||....+..+++++|+.. + ..+|..+... ..+.+.+...+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 55779999999999999999999999999999999999732 1 1122222221 11122222222
Q ss_pred HHHHHHccc--------------------------cCCCCCceEEEEcc--hhHHHHHHHHHHHHHhHhhhccceeeecc
Q 001304 677 ERVLLTMRI--------------------------TTSEPKDVAFVVDG--WALEIALKHYRKAFTELAILSRTAICCRV 728 (1104)
Q Consensus 677 ~~~~~~~~~--------------------------~~~~~~~~~lvi~g--~~l~~~~~~~~~~f~~l~~~~~~~i~~r~ 728 (1104)
+...+.... .........+.+.. ..+..+.+.+.+. .+.... ...+.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~-~~~~iEi 181 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAEL--GLQFVQ-GARFWHV 181 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHC--CCEEEe-cCeeEEE
Confidence 211111000 00000011122222 1222222222211 111111 2236688
Q ss_pred Chh--hHHHHHHHHHh-------cCCeEEEEcCCccChhhhhhcCceEEecCCch-H--HH---hhhcceeccc
Q 001304 729 TPS--QKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKADIGVGISGREG-L--QA---ARAADYSIGK 787 (1104)
Q Consensus 729 sP~--qK~~iV~~lk~-------~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~-~--~a---~~~AD~vl~~ 787 (1104)
+|. +|+..++.+.+ ..+.|+++|||.||++||+.|++|||| |+.. . .+ +..||++...
T Consensus 182 ~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM-~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV-KGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred ecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe-cCCCCCCcccccccCCceEeccC
Confidence 886 79998887765 346799999999999999999999999 5333 1 12 2367887754
No 51
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.85 E-value=3.7e-08 Score=108.33 Aligned_cols=173 Identities=20% Similarity=0.298 Sum_probs=104.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEe--------cCCcHHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI--------DGKTEDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 682 (1104)
++.+++.++|++++++|++++++|||+...+..+..++++..+ ..++..+.. ..-+.+.+...++. +..
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~-~~~ 94 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNF-LKK 94 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHH-HHH
Confidence 5788999999999999999999999999999999999887422 111112221 11122222222221 111
Q ss_pred ccc------------cCCC---------------------------CCceEEEE-cchhHHHHHHHHHH-HHH-hHhhhc
Q 001304 683 MRI------------TTSE---------------------------PKDVAFVV-DGWALEIALKHYRK-AFT-ELAILS 720 (1104)
Q Consensus 683 ~~~------------~~~~---------------------------~~~~~lvi-~g~~l~~~~~~~~~-~f~-~l~~~~ 720 (1104)
... .... .....++. +.+.++.+.+.+.+ .+. .+....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 000 0000 00001111 11122222222221 111 111112
Q ss_pred cceeeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 721 RTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 721 ~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
...-+.+++|. +|+..++.+.+. .+.++++||+.||++|++.|++|++| +++...++..||+++.+
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADEELKALADYVTDS 246 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchHHHHHhCCEEecC
Confidence 23346678887 699999988763 36799999999999999999999999 78888888899999864
No 52
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.74 E-value=1.3e-07 Score=103.87 Aligned_cols=170 Identities=13% Similarity=0.099 Sum_probs=97.1
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEecC--------------CcHHHHHHHHH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG--------------KTEDEVCRSLE 677 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~~--------------~~~~~~~~~~~ 677 (1104)
..+.+.++|+.|+++|++++++|||....+..+.+++|+..+ ..+|..+...+ -+.+.+...++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445689999999999999999999999999999999997432 11222222211 11122222222
Q ss_pred HHHHHcc--c------------------------cCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh
Q 001304 678 RVLLTMR--I------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS 731 (1104)
Q Consensus 678 ~~~~~~~--~------------------------~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~ 731 (1104)
....... . .........++.+.+.++.+.+.+.+. .+.... ...+.++.|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-s~~~~ei~~~ 173 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVEL--GLEVTH-GNRFYHVLGA 173 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHc--CCEEEe-CCceEEEecC
Confidence 1111000 0 000001111112222222222222110 111111 1235667776
Q ss_pred --hHHHHHHHHHh----c--CCeEEEEcCCccChhhhhhcCceEEecCCch---HHHhhh--c-ceeccc
Q 001304 732 --QKAQLVELLKS----C--DYRTLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--A-DYSIGK 787 (1104)
Q Consensus 732 --qK~~iV~~lk~----~--~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~---~~a~~~--A-D~vl~~ 787 (1104)
.|+..++.+.+ . .+.++++||+.||.+|++.|++|||| +|+. .+++.. | +++...
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCCCCCccccCccCCCcEEEcCC
Confidence 68888777764 2 56799999999999999999999999 7765 356665 4 476643
No 53
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.68 E-value=6.6e-08 Score=101.39 Aligned_cols=124 Identities=25% Similarity=0.273 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++++.|+.+++.| ++.++||-....+..+++++|+...-.+ -+.+++..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an--~l~~~~~g------------------------ 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDDSD------------------------ 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce--eeEEecCC------------------------
Confidence 47999999999999975 9999999999999999999998421110 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
.++| ..+ ..+..|..+++.+++.+..++++|||.||++|++.||+||++.++
T Consensus 121 ---~~tG----------------------~~~---~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 121 ---RVVG----------------------YQL---RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred ---eeEC----------------------eee---cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 0000 001 346789999999988888899999999999999999999999555
Q ss_pred chHHHhhhc-ceecc-cchhhHH
Q 001304 773 EGLQAARAA-DYSIG-KFRFLKR 793 (1104)
Q Consensus 773 ~~~~a~~~A-D~vl~-~f~~l~~ 793 (1104)
+. ++++| |+-.. +..-+..
T Consensus 173 ~~--~~~~~~~~~~~~~~~~~~~ 193 (203)
T TIGR02137 173 EN--VIREFPQFPAVHTYEDLKR 193 (203)
T ss_pred HH--HHHhCCCCCcccCHHHHHH
Confidence 44 55655 44332 3333433
No 54
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.65 E-value=1.1e-07 Score=106.55 Aligned_cols=127 Identities=24% Similarity=0.285 Sum_probs=90.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++.+.++.|+++|+++.++||.....+..+..++|+...-.+ .+...+|.-
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an-~lei~dg~l------------------------ 235 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN-ELEIMDGKL------------------------ 235 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe-EEEEECCEE------------------------
Confidence 4789999999999999999999999998888888888887321100 000001100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee-ccChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~sP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
+ ..+.. -+..+.|.+.++.+.+ .| +.++++|||.||.+|++.|++||
T Consensus 236 -----t-----------------------g~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 236 -----T-----------------------GNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred -----E-----------------------eEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeE
Confidence 0 00110 1234678888887765 33 67999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccchhhHHHH
Q 001304 768 GISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
++ ++.+.+++.||+++. +..|..++
T Consensus 288 A~--nAkp~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 288 AY--HAKPKVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred Ee--CCCHHHHhhCCEEec-CcCHHHHH
Confidence 99 566778889999996 44555444
No 55
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.61 E-value=2.7e-07 Score=102.29 Aligned_cols=170 Identities=19% Similarity=0.189 Sum_probs=98.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEecC----------------------C
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG----------------------K 667 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~~----------------------~ 667 (1104)
+.+.++++++|++|+++|++++++||+....+..+++++|+..+ ..++.++...+ .
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 35667899999999999999999999999999999999997543 11122222111 1
Q ss_pred cHHHHHHHHHHHHHHcc----c----------------------cCCCCCceEEE-E-cchhHHHHHHHHHHHHHhHhhh
Q 001304 668 TEDEVCRSLERVLLTMR----I----------------------TTSEPKDVAFV-V-DGWALEIALKHYRKAFTELAIL 719 (1104)
Q Consensus 668 ~~~~~~~~~~~~~~~~~----~----------------------~~~~~~~~~lv-i-~g~~l~~~~~~~~~~f~~l~~~ 719 (1104)
+.+.....++...+... . .........++ . +.+..+.+.+.+.. + .+...
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~ 177 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKR-L-GLKVT 177 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHH-c-CCEEE
Confidence 11222222211111000 0 00000011111 1 22222222222211 1 11111
Q ss_pred ccceeeeccChh-hHHHHHHHHHh----cC-CeEEEEcCCccChhhhhhcCceEEecCCchHHHh----hhc-ceec
Q 001304 720 SRTAICCRVTPS-QKAQLVELLKS----CD-YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA----RAA-DYSI 785 (1104)
Q Consensus 720 ~~~~i~~r~sP~-qK~~iV~~lk~----~~-~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~----~~A-D~vl 785 (1104)
...-+.++.|. .|+..++.+.+ .. +.|+++||+.||++|++.|++|++| +|+..+++ .+| +.+.
T Consensus 178 -~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam-~NA~~~~k~~~~~~a~~~v~ 252 (273)
T PRK00192 178 -RGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV-PGPDGPNPPLLPGIADGEFI 252 (273)
T ss_pred -ECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe-CCCCCCCcccCccccCCceE
Confidence 11234455555 78888877764 35 8899999999999999999999999 88887777 555 5655
No 56
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.58 E-value=4.9e-07 Score=95.28 Aligned_cols=122 Identities=23% Similarity=0.250 Sum_probs=86.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.+ .+..-+|
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an-~l~~~dG------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN-ELEIDDG------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee-EEEEeCC-------------------------
Confidence 78999999999999999999999999999999999999998543221 0000111
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceE
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
+.+| .++.-.+..+.|...++.+.+ .| +.+.++|||.||.|||+.|+.+|
T Consensus 130 ----~ltG----------------------~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~i 183 (212)
T COG0560 130 ----KLTG----------------------RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPI 183 (212)
T ss_pred ----EEec----------------------eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCe
Confidence 0011 112223344678888866554 34 46999999999999999999999
Q ss_pred EecCCchHHHhhhcceeccc
Q 001304 768 GISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~ 787 (1104)
++... ....+.|+..+..
T Consensus 184 a~n~~--~~l~~~a~~~~~~ 201 (212)
T COG0560 184 AVNPK--PKLRALADVRIWP 201 (212)
T ss_pred EeCcC--HHHHHHHHHhcCh
Confidence 99333 2345566654443
No 57
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.53 E-value=8.4e-07 Score=97.01 Aligned_cols=169 Identities=17% Similarity=0.194 Sum_probs=102.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC----CCeEEEecCCc-HHHHH----------HHH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSIDGKT-EDEVC----------RSL 676 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~----~~~~~~~~~~~-~~~~~----------~~~ 676 (1104)
.+..+.+.+++++++++|+.++++||+....+..+.++.++..++. ++..+...+.. .+... ..+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567889999999999999999999999999999999999765521 22233333311 11110 001
Q ss_pred HHHHHHccc---c---CCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhc----cceeeeccChh--hHHHHHHHHHhc-
Q 001304 677 ERVLLTMRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFTELAILS----RTAICCRVTPS--QKAQLVELLKSC- 743 (1104)
Q Consensus 677 ~~~~~~~~~---~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~----~~~i~~r~sP~--qK~~iV~~lk~~- 743 (1104)
......+.. . .....+..+..+.+......+.+.+.+....... ...-+.++.|. .|+..++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 111111110 0 1112233444443333333333344333211111 12234467775 799999988762
Q ss_pred ---CCeEEEEcCCccChhhhhh-cCceEEecCCchHHHhhhc
Q 001304 744 ---DYRTLAIGDGGNDVRMIQK-ADIGVGISGREGLQAARAA 781 (1104)
Q Consensus 744 ---~~~v~~iGDG~ND~~ml~~-AdvGIam~g~~~~~a~~~A 781 (1104)
...|+++||+.||++|++. ++.||+| +|+..+++..+
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~k~~~ 220 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEELLQWY 220 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHHHHHH
Confidence 4679999999999999998 7799999 88877777643
No 58
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.51 E-value=4.5e-07 Score=91.66 Aligned_cols=99 Identities=21% Similarity=0.285 Sum_probs=75.8
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
..|+.|+++|+++.++|+.+...+....+.+|+..- . .+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------f--~~--------------------------------- 79 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------H--EG--------------------------------- 79 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------E--ec---------------------------------
Confidence 589999999999999999999999999999998311 0 00
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~ 779 (1104)
+ .=.|+--..+++.++-..+.+++|||+.||++|++.|+++++| +++..+++.
T Consensus 80 ------------------------~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am-~nA~~~lk~ 132 (169)
T TIGR02726 80 ------------------------I--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV-GDAVADVKE 132 (169)
T ss_pred ------------------------C--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC-cCchHHHHH
Confidence 0 0012222233333332346799999999999999999999999 888888999
Q ss_pred hcceecc
Q 001304 780 AADYSIG 786 (1104)
Q Consensus 780 ~AD~vl~ 786 (1104)
.||++..
T Consensus 133 ~A~~I~~ 139 (169)
T TIGR02726 133 AAAYVTT 139 (169)
T ss_pred hCCEEcC
Confidence 9999875
No 59
>PLN02382 probable sucrose-phosphatase
Probab=98.45 E-value=1.3e-06 Score=101.81 Aligned_cols=163 Identities=18% Similarity=0.207 Sum_probs=101.6
Q ss_pred hHHHH-HHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC----CCeEEEecCCc-HHHHH-HHH---------HHHHH
Q 001304 618 VPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSIDGKT-EDEVC-RSL---------ERVLL 681 (1104)
Q Consensus 618 ~~~~I-~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~----~~~~~~~~~~~-~~~~~-~~~---------~~~~~ 681 (1104)
..+++ +++++.|+.++++|||.+..+..+.++.++..++. ++..+...+.- .+... ..+ .....
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44455 88899999999999999999999999999877742 12222222111 11111 111 11111
Q ss_pred Hcc-c--c---CCCCCceEEEEcchhHHHHHHHHHHHHHhH----hhhccceeeeccChh--hHHHHHHHHHhc----C-
Q 001304 682 TMR-I--T---TSEPKDVAFVVDGWALEIALKHYRKAFTEL----AILSRTAICCRVTPS--QKAQLVELLKSC----D- 744 (1104)
Q Consensus 682 ~~~-~--~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l----~~~~~~~i~~r~sP~--qK~~iV~~lk~~----~- 744 (1104)
.+. . . .+...+..+..+.+....+.+.+.+.|... ........+.++.|. .|+..++.|.+. |
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 111 0 0 111223445555544555555555555321 111223346788887 599999988653 3
Q ss_pred --CeEEEEcCCccChhhhhhcC-ceEEecCCchHHHhhhc
Q 001304 745 --YRTLAIGDGGNDVRMIQKAD-IGVGISGREGLQAARAA 781 (1104)
Q Consensus 745 --~~v~~iGDG~ND~~ml~~Ad-vGIam~g~~~~~a~~~A 781 (1104)
..++++||+.||++||+.|+ .||+| ||+..++++.+
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam-~NA~~elk~~a 231 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMV-SNAQEELLQWY 231 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEE-cCCcHHHHHHH
Confidence 57999999999999999999 69999 88888888743
No 60
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.45 E-value=1.5e-06 Score=94.33 Aligned_cols=162 Identities=19% Similarity=0.271 Sum_probs=95.1
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH--------HHH-HH---------HHHHHHH
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE--------DEV-CR---------SLERVLL 681 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~--------~~~-~~---------~~~~~~~ 681 (1104)
++++ ++++|++++++|||....+..+...+++..++ .++..+|... +.. .. .+.....
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~---~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD---VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALA 97 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC---EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHh
Confidence 5666 69999999999999999999999999875332 1233333221 110 00 1122222
Q ss_pred Hcc---ccCCC---CCceEEEEcch---hHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-cC---Ce
Q 001304 682 TMR---ITTSE---PKDVAFVVDGW---ALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-CD---YR 746 (1104)
Q Consensus 682 ~~~---~~~~~---~~~~~lvi~g~---~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~~---~~ 746 (1104)
... .+... ..+..+..+.+ .++.+.+.+.+............-+.++.|. .|+..++.+.+ .| ..
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~ 177 (236)
T TIGR02471 98 DIPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQ 177 (236)
T ss_pred cCCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHH
Confidence 111 11111 12333443442 2222222222211111001111112367776 79999998875 33 46
Q ss_pred EEEEcCCccChhhhhhcCceEEecCCchHHHhhhcc----eecc
Q 001304 747 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD----YSIG 786 (1104)
Q Consensus 747 v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD----~vl~ 786 (1104)
++++||+.||.+|++.|++||+| +++..++++.|| ++..
T Consensus 178 ~i~~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~~~~~~v~~ 220 (236)
T TIGR02471 178 ILVAGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRHQQRIYFAN 220 (236)
T ss_pred EEEEcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhcCCcEEEcC
Confidence 99999999999999999999999 888888999999 6554
No 61
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.41 E-value=3.7e-06 Score=100.36 Aligned_cols=158 Identities=15% Similarity=0.168 Sum_probs=91.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeE----------------------EEecCCcH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQL----------------------LSIDGKTE 669 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~----------------------~~~~~~~~ 669 (1104)
.-+.+.++|+.|+++||.++++||+....+..+++++|+..+ ..++.. +.-.+.+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~ 513 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAY 513 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCCH
Confidence 445789999999999999999999999999999999986321 011112 22223333
Q ss_pred HHHHHHHHHHHHHcc-------------cc---CC---------------------CCCceEEEEcc--hhHHHHHHHHH
Q 001304 670 DEVCRSLERVLLTMR-------------IT---TS---------------------EPKDVAFVVDG--WALEIALKHYR 710 (1104)
Q Consensus 670 ~~~~~~~~~~~~~~~-------------~~---~~---------------------~~~~~~lvi~g--~~l~~~~~~~~ 710 (1104)
+.+.+.++...+... .. +. ......+...| +.++.+.+.++
T Consensus 514 e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L~ 593 (694)
T PRK14502 514 KDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHIQ 593 (694)
T ss_pred HHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHHH
Confidence 344433333222110 00 00 00001222222 23333333333
Q ss_pred HHHHhHhhhccceeeeccCh-hhHHHHHHHHHhc----CCeEEEE--cCCccChhhhhhcCceEEecCCch
Q 001304 711 KAFTELAILSRTAICCRVTP-SQKAQLVELLKSC----DYRTLAI--GDGGNDVRMIQKADIGVGISGREG 774 (1104)
Q Consensus 711 ~~f~~l~~~~~~~i~~r~sP-~qK~~iV~~lk~~----~~~v~~i--GDG~ND~~ml~~AdvGIam~g~~~ 774 (1104)
++ .+... ...-|..+.+ .+|+..++.|.+. ...++++ |||.||++||+.||+||+|.+..+
T Consensus 594 ~~--~l~v~-~g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~ 661 (694)
T PRK14502 594 QS--GLEYS-FGGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGN 661 (694)
T ss_pred Hc--CcEEE-ECCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCC
Confidence 22 11111 1334555664 3799999988763 2345556 999999999999999999955544
No 62
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.38 E-value=1.4e-06 Score=87.46 Aligned_cols=95 Identities=20% Similarity=0.180 Sum_probs=72.1
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+|+.|+++|+++.++||++...+..+++..|+... +++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------~~~---------------------------------- 73 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------YQG---------------------------------- 73 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE--------Eec----------------------------------
Confidence 99999999999999999999999999999997210 000
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHH-h---cCCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-S---CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk-~---~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
...|...++.+. + ..+.++++||+.||++|++.|++++++ .+....
T Consensus 74 -----------------------------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v-~~~~~~ 123 (154)
T TIGR01670 74 -----------------------------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAV-ADAHPL 123 (154)
T ss_pred -----------------------------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEec-CCcCHH
Confidence 012343333332 2 346799999999999999999999999 444455
Q ss_pred Hhhhcceeccc
Q 001304 777 AARAADYSIGK 787 (1104)
Q Consensus 777 a~~~AD~vl~~ 787 (1104)
.+..||+++..
T Consensus 124 ~~~~a~~i~~~ 134 (154)
T TIGR01670 124 LIPRADYVTRI 134 (154)
T ss_pred HHHhCCEEecC
Confidence 66789998864
No 63
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.38 E-value=1.4e-06 Score=93.44 Aligned_cols=124 Identities=23% Similarity=0.328 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++++.++.|+++|+++.++||.....+..+...+|+..--.. .+..++..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~--~~~~~~~~------------------------ 138 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN--RLEVEDGK------------------------ 138 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee--EEEEECCE------------------------
Confidence 5899999999999999999999999999999999999988431110 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-cChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
++ ..+..+ ..+..|..+++.+.+ . .+.++++||+.||++|.+.|++++
T Consensus 139 ----~~-----------------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 139 ----LT-----------------------GLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred ----EE-----------------------EEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 00 001111 122346666665543 2 246999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccchhh
Q 001304 768 GISGREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~~l 791 (1104)
++.+.+ .+.++||++|.+.++-
T Consensus 192 ~~~~~~--~~~~~a~~~i~~~~~~ 213 (219)
T TIGR00338 192 AFNAKP--KLQQKADICINKKDLT 213 (219)
T ss_pred EeCCCH--HHHHhchhccCCCCHH
Confidence 995433 3556999999976643
No 64
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.37 E-value=5e-06 Score=89.02 Aligned_cols=43 Identities=9% Similarity=0.071 Sum_probs=38.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.+..-+++.++|++|+++|++++++||+....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3556678999999999999999999999999999999999974
No 65
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.33 E-value=6.5e-06 Score=88.35 Aligned_cols=147 Identities=19% Similarity=0.233 Sum_probs=86.5
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC---------------------cHHHHHH
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------------------TEDEVCR 674 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~---------------------~~~~~~~ 674 (1104)
+.++++|+.|+++|++++++||+....+..+.+.+|+... .+++.||. +.+.+.+
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~----~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGD----PYIAENGAAIHLEELWREEPGYPRIILGISYGIIRL 94 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----cEEEeCCcEEEcCcccccCCCceEEecCCCHHHHHH
Confidence 3489999999999999999999999999999999997411 12222221 1122222
Q ss_pred HHHHHHHHccc----c----------------------CCCCCceEEEE--cchhHHHHHHHHHHHHHhHhhhccceeee
Q 001304 675 SLERVLLTMRI----T----------------------TSEPKDVAFVV--DGWALEIALKHYRKAFTELAILSRTAICC 726 (1104)
Q Consensus 675 ~~~~~~~~~~~----~----------------------~~~~~~~~lvi--~g~~l~~~~~~~~~~f~~l~~~~~~~i~~ 726 (1104)
.++...+.... . ........+.. +.+.++.+.+.+.+ . .+.... ...+.
T Consensus 95 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~~~~ 171 (221)
T TIGR02463 95 VLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTALLAD-L-GLAIVQ-GNRFS 171 (221)
T ss_pred HHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHHHHH-c-CCeEEe-cCCee
Confidence 22211111000 0 00011122222 22333333222211 1 121111 23456
Q ss_pred ccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEe
Q 001304 727 RVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 727 r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
++.|. +|+..++.+.+ ..+.|+++||+.||++||+.|+.|||+
T Consensus 172 ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 172 HVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred EEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 77776 69888887754 246799999999999999999999987
No 66
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.31 E-value=5.2e-06 Score=91.25 Aligned_cols=172 Identities=17% Similarity=0.225 Sum_probs=98.3
Q ss_pred cCCCChHHHHHHHHH-cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-ecCC-----cHHHHHHHHHHHHHH-cc
Q 001304 613 RLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGK-----TEDEVCRSLERVLLT-MR 684 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~-aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~-~~ 684 (1104)
.+.+++.++|+.|++ .|++++++|||....+..+....++.-...++..+. .++. -..+....+...+.. ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456789999999998 899999999999999988887666321111111111 1111 011111222222222 10
Q ss_pred ---ccCCCCCceEEEEcch-------hHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeEE
Q 001304 685 ---ITTSEPKDVAFVVDGW-------ALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTL 748 (1104)
Q Consensus 685 ---~~~~~~~~~~lvi~g~-------~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~ 748 (1104)
...-+.+..+++.... .+..+.+.+.+.+..+ .+....-+.++.|. +|+..++.+.+ . ...++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~-~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQL-ALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCce-EEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 1111223333333221 1111111222222111 11234455677776 79999887765 3 36799
Q ss_pred EEcCCccChhhhhhc----CceEEecCCchHHHhhhcceecccchh
Q 001304 749 AIGDGGNDVRMIQKA----DIGVGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 749 ~iGDG~ND~~ml~~A----dvGIam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++||+.||.+|++.+ +.||+| |+.. ..|++.|.+-.-
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vav-g~a~----~~A~~~l~~~~~ 235 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKV-GTGA----TQASWRLAGVPD 235 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEE-CCCC----CcCeEeCCCHHH
Confidence 999999999999999 999999 7653 457888876543
No 67
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.28 E-value=3e-06 Score=87.69 Aligned_cols=95 Identities=21% Similarity=0.197 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
.+|+.|+++|+++.++||+....+..+++++|+... +.|
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~--------f~g--------------------------------- 93 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL--------YQG--------------------------------- 93 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------ecC---------------------------------
Confidence 689999999999999999999999999999997311 000
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-Hhc---CCeEEEEcCCccChhhhhhcCceEEecCCchH
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSC---DYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 775 (1104)
.+.|...++.+ ++. .+.+++|||+.||++|++.|++++++ ++...
T Consensus 94 ------------------------------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v-~~~~~ 142 (183)
T PRK09484 94 ------------------------------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAV-ADAHP 142 (183)
T ss_pred ------------------------------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEec-CChhH
Confidence 12243433333 222 35799999999999999999999998 55555
Q ss_pred HHhhhcceecc
Q 001304 776 QAARAADYSIG 786 (1104)
Q Consensus 776 ~a~~~AD~vl~ 786 (1104)
..+..||+++.
T Consensus 143 ~~~~~a~~v~~ 153 (183)
T PRK09484 143 LLLPRADYVTR 153 (183)
T ss_pred HHHHhCCEEec
Confidence 55668999985
No 68
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.27 E-value=1.6e-06 Score=85.30 Aligned_cols=129 Identities=21% Similarity=0.305 Sum_probs=85.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++++.++.|++.|.+|.++||--..-+..+|.++||...+-.-+.+.++.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-------------------------- 141 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-------------------------- 141 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc--------------------------
Confidence 367999999999999999999999999999999999999954321100111110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc--CCeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~--~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
+|+-+. |.. . -.-+....|+++++.+++. .+.++|||||+||.+|+..||.=||..
T Consensus 142 -----~Gk~~g---------fd~------~--~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 142 -----DGKYLG---------FDT------N--EPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred -----CCcccc---------ccc------C--CccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 000000 000 0 0001222699999999873 367899999999999999988777774
Q ss_pred CCchH-HHhhhcceecccch
Q 001304 771 GREGL-QAARAADYSIGKFR 789 (1104)
Q Consensus 771 g~~~~-~a~~~AD~vl~~f~ 789 (1104)
|+--. +++..|+.-+.+|.
T Consensus 200 g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 200 GNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred CceEcHhhHhccHHHHHHHH
Confidence 54322 24446665555543
No 69
>PTZ00174 phosphomannomutase; Provisional
Probab=98.26 E-value=5.4e-06 Score=90.39 Aligned_cols=59 Identities=22% Similarity=0.260 Sum_probs=47.1
Q ss_pred eeeccChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhhc-CceEEecCCchHHHhhhcce
Q 001304 724 ICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKA-DIGVGISGREGLQAARAADY 783 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~A-dvGIam~g~~~~~a~~~AD~ 783 (1104)
.+.+++|. +|+..++.|.+..+.|+++|| |.||++||+.| -.|+++ +|+...++..+.+
T Consensus 178 ~~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v-~n~~~~~~~~~~~ 243 (247)
T PTZ00174 178 ISFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSV-KNPEDTIKILKEL 243 (247)
T ss_pred eEEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEe-CCHHHHHHHHHHH
Confidence 46688886 799999999887789999999 99999999976 577777 4655555555543
No 70
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.13 E-value=2.1e-05 Score=83.21 Aligned_cols=124 Identities=23% Similarity=0.231 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|+++++++.|+++ +++.++||.....+..+...+|+...-.. .+..++..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDEDG------------------------ 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCCC------------------------
Confidence 3689999999999999 99999999999999999999998321100 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-cChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g 771 (1104)
..+... ..|..|...++.++..+..++|+|||.||++|.+.|++|+....
T Consensus 121 -----------------------------~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~ 171 (205)
T PRK13582 121 -----------------------------MITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRP 171 (205)
T ss_pred -----------------------------eEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECC
Confidence 000011 13667888888888778899999999999999999999998733
Q ss_pred CchHHHhhhcce-ecccchhhHH
Q 001304 772 REGLQAARAADY-SIGKFRFLKR 793 (1104)
Q Consensus 772 ~~~~~a~~~AD~-vl~~f~~l~~ 793 (1104)
.+ ......+++ ++.++..+..
T Consensus 172 ~~-~~~~~~~~~~~~~~~~el~~ 193 (205)
T PRK13582 172 PA-NVIAEFPQFPAVHTYDELLA 193 (205)
T ss_pred CH-HHHHhCCcccccCCHHHHHH
Confidence 22 212234565 6666655443
No 71
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.09 E-value=6.2e-05 Score=81.28 Aligned_cols=43 Identities=5% Similarity=0.036 Sum_probs=38.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
+...+.+.++|++|+++||.++++||+.......+.+++++..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3466779999999999999999999999999999999999743
No 72
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.08 E-value=1.6e-05 Score=83.94 Aligned_cols=117 Identities=30% Similarity=0.314 Sum_probs=79.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||-....+..++...|+...-.. .+..++..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~g------------------------ 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN--ELVFDEKG------------------------ 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE--EEEEcCCC------------------------
Confidence 5899999999999999999999999999999999999996321000 11111000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIa 768 (1104)
..+...+....|..|..+++.+.+ . .+.++++||+.||++|++.||++++
T Consensus 134 --------------------------~~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 134 --------------------------FIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred --------------------------eEecceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 000011122345668777776544 2 3569999999999999999999999
Q ss_pred ecCCchHHHhhhcc
Q 001304 769 ISGREGLQAARAAD 782 (1104)
Q Consensus 769 m~g~~~~~a~~~AD 782 (1104)
+ +..+.....++|
T Consensus 188 ~-~~~~~~~~~a~~ 200 (201)
T TIGR01491 188 L-GDEGHADYLAKD 200 (201)
T ss_pred E-CCCccchhhccc
Confidence 9 443433333444
No 73
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.06 E-value=8.9e-06 Score=86.07 Aligned_cols=157 Identities=23% Similarity=0.261 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH-----HHHHHHH---HHHHHHcc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE-----DEVCRSL---ERVLLTMR 684 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~ 684 (1104)
++.+++.++|++|++.|++++++||+....+..+..+.+..--..++..+...+... +.....+ ++....+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477889999999999999999999999999999988744211111122332222111 1111111 11000000
Q ss_pred c-------cCCCCCceEEE--Ecch-hHHHHHHHHHHHHHh-------HhhhccceeeeccChh--hHHHHHHHHHhc-C
Q 001304 685 I-------TTSEPKDVAFV--VDGW-ALEIALKHYRKAFTE-------LAILSRTAICCRVTPS--QKAQLVELLKSC-D 744 (1104)
Q Consensus 685 ~-------~~~~~~~~~lv--i~g~-~l~~~~~~~~~~f~~-------l~~~~~~~i~~r~sP~--qK~~iV~~lk~~-~ 744 (1104)
. ...+.+...+. ..+. ..........+.... +.......-+.++.|. +|+..++.+.+. +
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 00011112221 2111 001111111111111 1111123345677885 799999987652 2
Q ss_pred ---CeEEEEcCCccChhhhhhcCceEEe
Q 001304 745 ---YRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 745 ---~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
..++++||+.||.+|++.+++||+|
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999997
No 74
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=97.92 E-value=1.9e-05 Score=82.49 Aligned_cols=92 Identities=25% Similarity=0.287 Sum_probs=67.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEE
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (1104)
+++++.|+.++++|++++++||.....+..+++.+|+.... ++..+. .
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~----v~~~~~-~--------------------------- 139 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN----VIGNEL-F--------------------------- 139 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG----EEEEEE-E---------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE----EEEEee-e---------------------------
Confidence 66669999999999999999999999999999999985321 111000 0
Q ss_pred EEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh-h--HHHHHHHH------HhcCCeEEEEcCCccChhhhh
Q 001304 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS-Q--KAQLVELL------KSCDYRTLAIGDGGNDVRMIQ 761 (1104)
Q Consensus 696 vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~-q--K~~iV~~l------k~~~~~v~~iGDG~ND~~ml~ 761 (1104)
+. .......++++. + |...++.+ +.....++++|||.||.+|||
T Consensus 140 --~~--------------------~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 140 --DN--------------------GGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp --CT--------------------TCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred --ec--------------------ccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 00 012334555555 4 99999998 335688999999999999996
No 75
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.89 E-value=2.2e-05 Score=75.11 Aligned_cols=96 Identities=22% Similarity=0.213 Sum_probs=75.8
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
..|+.+.++||++.++||++...+..=|+++||-. ...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------~~q---------------------------------- 79 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------LYQ---------------------------------- 79 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce--------eee----------------------------------
Confidence 47999999999999999999999999999999821 111
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchH
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 775 (1104)
--++|....+.|.+ .-+.|+.+||-.||.|+|+..+.+++. ..+..
T Consensus 80 -----------------------------G~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~-~dAh~ 129 (170)
T COG1778 80 -----------------------------GISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV-ADAHP 129 (170)
T ss_pred -----------------------------chHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc-cccCH
Confidence 11245444444433 236799999999999999999999999 67777
Q ss_pred HHhhhcceeccc
Q 001304 776 QAARAADYSIGK 787 (1104)
Q Consensus 776 ~a~~~AD~vl~~ 787 (1104)
..++.||+|+..
T Consensus 130 ~v~~~a~~Vt~~ 141 (170)
T COG1778 130 LLKQRADYVTSK 141 (170)
T ss_pred HHHHhhHhhhhc
Confidence 888899999863
No 76
>PLN02954 phosphoserine phosphatase
Probab=97.89 E-value=6.3e-05 Score=80.87 Aligned_cols=133 Identities=22% Similarity=0.339 Sum_probs=81.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.++++++++.|+++|+++.++||.....+..++..+|+....--...+.++...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 47899999999999999999999999999999999999984211000000010000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc-C-CeEEEEcCCccChhhhhh--cCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-D-YRTLAIGDGGNDVRMIQK--ADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~-~-~~v~~iGDG~ND~~ml~~--AdvGIa 768 (1104)
.+.|. ..... ...+..|...++.+.+. + +.++++||+.||+.|.+. ++++++
T Consensus 140 ---~~~g~-------------------~~~~~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~ 195 (224)
T PLN02954 140 ---EYAGF-------------------DENEP--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIG 195 (224)
T ss_pred ---cEECc-------------------cCCCc--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEe
Confidence 00000 00000 01123477777766542 2 579999999999999888 455555
Q ss_pred ecCCc-hHHHhhhcceecccchhhHH
Q 001304 769 ISGRE-GLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 769 m~g~~-~~~a~~~AD~vl~~f~~l~~ 793 (1104)
..+.. .......+|+++.+++.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 196 YGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred cCCCccCHHHHhcCCEEECCHHHHHH
Confidence 42221 12233468999987665543
No 77
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.89 E-value=6.2e-05 Score=80.21 Aligned_cols=137 Identities=13% Similarity=0.163 Sum_probs=83.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++++++.+.++.|++.|+++.++||.....+..+....+.... +..-+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-----i~~n~-------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-----IYCNE-------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-----EEece--------------------------
Confidence 46899999999999999999999999999888888887643211 11000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhcccee-eeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i-~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
+..++..+... +. ..... +..-....|..+++.++.....++|+|||.||.+|.+.||+.++-
T Consensus 118 ---~~~~~~~~~~~-------~p-----~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar- 181 (214)
T TIGR03333 118 ---ADFSNEYIHID-------WP-----HPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFAR- 181 (214)
T ss_pred ---eEeeCCeeEEe-------CC-----CCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEeh-
Confidence 00001000000 00 00000 000013479999998887777899999999999999999997764
Q ss_pred CCchH--HHhhhcceecccchhhHHHH
Q 001304 771 GREGL--QAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 771 g~~~~--~a~~~AD~vl~~f~~l~~ll 795 (1104)
+.-.. +-...+.+.+.+|..+...+
T Consensus 182 ~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 182 DYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred HHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 22111 11113444455665555443
No 78
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.85 E-value=0.00027 Score=89.25 Aligned_cols=173 Identities=18% Similarity=0.171 Sum_probs=97.5
Q ss_pred CCCChHHHHHHHHH-cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCc-------HHHHHHHHHHHHHHccc
Q 001304 614 LQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT-------EDEVCRSLERVLLTMRI 685 (1104)
Q Consensus 614 lr~~~~~~I~~l~~-aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 685 (1104)
+.+++.++|+.|.+ .|+.|+++||+............++.--..+|..+...+.. .......+...++.+..
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~ 594 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVD 594 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHh
Confidence 56788999999999 69999999999999888776554431111122222221111 11112223333332211
Q ss_pred ----cCCCCCceEEEEcc----hhH-HHHHHHHHHHHHhHhh-----hccceeeeccChh--hHHHHHHHHHhc--CCeE
Q 001304 686 ----TTSEPKDVAFVVDG----WAL-EIALKHYRKAFTELAI-----LSRTAICCRVTPS--QKAQLVELLKSC--DYRT 747 (1104)
Q Consensus 686 ----~~~~~~~~~lvi~g----~~l-~~~~~~~~~~f~~l~~-----~~~~~i~~r~sP~--qK~~iV~~lk~~--~~~v 747 (1104)
...+.+...+...- ..+ ....+++.+.+..+.. .....-+.++.|. +|+..++.+.+. ...+
T Consensus 595 ~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~v 674 (726)
T PRK14501 595 RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFV 674 (726)
T ss_pred cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEE
Confidence 11112223333321 111 1111222222222110 1112334567775 799999988863 3579
Q ss_pred EEEcCCccChhhhhhc---CceEEecCCchHHHhhhcceecccchhh
Q 001304 748 LAIGDGGNDVRMIQKA---DIGVGISGREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 748 ~~iGDG~ND~~ml~~A---dvGIam~g~~~~~a~~~AD~vl~~f~~l 791 (1104)
+++||+.||.+|++.+ +.||+| |+. ..+|++.+.+.+..
T Consensus 675 l~~GD~~nDe~Mf~~~~~~~~~v~v-G~~----~s~A~~~l~~~~eV 716 (726)
T PRK14501 675 LAIGDDTTDEDMFRALPETAITVKV-GPG----ESRARYRLPSQREV 716 (726)
T ss_pred EEECCCCChHHHHHhcccCceEEEE-CCC----CCcceEeCCCHHHH
Confidence 9999999999999996 588888 653 35789999865443
No 79
>PRK08238 hypothetical protein; Validated
Probab=97.83 E-value=0.0019 Score=76.53 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=69.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
|+++++.+.+++++++|++++++|+-+...+..+++..|+.+. ++..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~~------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDGT------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCCc-------------------------
Confidence 4789999999999999999999999999999999999997321 2211110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcC-CeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCD-YRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~-~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
.+..|+.|...++. ..+ +.+.++||+.+|.+|++.|+-.+++.
T Consensus 122 ---------------------------------~~~kg~~K~~~l~~--~l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 122 ---------------------------------TNLKGAAKAAALVE--AFGERGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred ---------------------------------cccCCchHHHHHHH--HhCccCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 02355566554432 222 23678899999999999999999993
No 80
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.66 E-value=0.00017 Score=75.00 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=75.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.. ++. +....+ . .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~-~~~~~~------------------~-~ 128 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE--IYS-NPASFD------------------N-D 128 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE--Eec-cCceEC------------------C-C
Confidence 37899999999999999999999999999999999888887332110 110 000000 0 0
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc-ChhhHHHHHHHHHhc-CCeEEEEcCCccChhhhhhcCceEE
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVG 768 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-sP~qK~~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGIa 768 (1104)
.. +... ..++..|... ....|..+++.++.. ...++++|||.||+.|.++||+-.|
T Consensus 129 g~-~~~~--------------------~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 129 GR-HIVW--------------------PHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred Cc-EEEe--------------------cCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 00 0000 0011112211 223589999998876 7889999999999999999987544
No 81
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.65 E-value=0.00017 Score=77.21 Aligned_cols=134 Identities=13% Similarity=0.178 Sum_probs=81.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
+++||+.+.++.|++.|+++.++||-....+..+.+.. +... . ++..+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~--~--i~~n~~~------------------------- 123 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKE--Q--IYCNGSD------------------------- 123 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcC--c--EEEeEEE-------------------------
Confidence 68999999999999999999999999999898888887 5321 1 1110000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceee-e-ccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-C-RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~-~-r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
.+|..+... ....... + ......|..+++.++.....+++||||.||++|.+.||+.++-
T Consensus 124 ----~~~~~~~~~-------------kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~- 185 (219)
T PRK09552 124 ----FSGEYITIT-------------WPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR- 185 (219)
T ss_pred ----ecCCeeEEe-------------ccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH-
Confidence 000000000 0000000 0 0001247888888877777899999999999999999997663
Q ss_pred CCchHHHhh--hcceecccchhhHHH
Q 001304 771 GREGLQAAR--AADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 g~~~~~a~~--~AD~vl~~f~~l~~l 794 (1104)
+.-...+.+ .+.+.+.+|..+...
T Consensus 186 ~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 186 DFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred HHHHHHHHHcCCCccccCCHHHHHHH
Confidence 211111111 355555666655443
No 82
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=97.60 E-value=0.00016 Score=74.38 Aligned_cols=100 Identities=21% Similarity=0.220 Sum_probs=68.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+++++++.++.+++.|++++++||.....+..++...|+..--.+ .+..++..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~--~~~~~~~g------------------------- 126 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFAN--RLEFDDNG------------------------- 126 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheee--eEEECCCC-------------------------
Confidence 579999999999999999999999999999999999987421110 01110000
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc----CCeEEEEcCCccChhhhhhc
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~A 763 (1104)
.+.|.. . .. -...+..|..+++.+.+. .+.++++|||.||.+|++.|
T Consensus 127 --~~~g~~-----------------~--~~--~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 127 --LLTGPI-----------------E--GQ--VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred --EEeCcc-----------------C--Cc--ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000000 0 00 123456799888876653 35799999999999999875
No 83
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.57 E-value=0.0002 Score=75.54 Aligned_cols=108 Identities=14% Similarity=0.077 Sum_probs=75.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-ecCCcHHHHHHHHHHHHHHccccCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGKTEDEVCRSLERVLLTMRITTSE 689 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1104)
..++.+++.+.++.++++|++++++||.....+..+++.+|+..--.. .+.. -+|
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~-~l~~~~~g----------------------- 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT-RLEESEDG----------------------- 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec-ceEEcCCC-----------------------
Confidence 456899999999999999999999999999999999999998321000 0000 000
Q ss_pred CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCc
Q 001304 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 690 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+|+ ...-.+.++.|...++.+.+ .+ +.++++||+.+|.+|++.|+.
T Consensus 141 ------~~~g~----------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~ 192 (202)
T TIGR01490 141 ------IYTGN----------------------IDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGH 192 (202)
T ss_pred ------EEeCC----------------------ccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCC
Confidence 00010 00012345678777766543 33 368999999999999999999
Q ss_pred eEEec
Q 001304 766 GVGIS 770 (1104)
Q Consensus 766 GIam~ 770 (1104)
++++.
T Consensus 193 ~~~v~ 197 (202)
T TIGR01490 193 PYVVN 197 (202)
T ss_pred cEEeC
Confidence 99883
No 84
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.56 E-value=0.00039 Score=74.37 Aligned_cols=119 Identities=24% Similarity=0.243 Sum_probs=85.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
+..+-+++++++..|+++|++..++|++....+..+.+..|+...-..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~-------------------------------- 134 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDV-------------------------------- 134 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccce--------------------------------
Confidence 567899999999999999999999999999999999999998543211
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcC
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
.++++. .|.....+++.+....+.++||||..+|+.|=+.|+
T Consensus 135 --------------------------------i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag 182 (220)
T COG0546 135 --------------------------------IVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAG 182 (220)
T ss_pred --------------------------------EEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcC
Confidence 111122 333334444444434347999999999999999999
Q ss_pred ---ceEEecCC-chHHHhh-hcceecccchhhHHH
Q 001304 765 ---IGVGISGR-EGLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 765 ---vGIam~g~-~~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
|||.. |. ....... .+|+++.+...|...
T Consensus 183 ~~~v~v~~-g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 183 VPAVGVTW-GYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCEEEEEC-CCCCCcchhhcCCCEEECCHHHHHHH
Confidence 55554 43 2233344 689999987766544
No 85
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.53 E-value=0.00026 Score=68.85 Aligned_cols=117 Identities=19% Similarity=0.221 Sum_probs=74.9
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCC
Q 001304 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (1104)
Q Consensus 610 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1104)
-..++.+++++.++.|+++|++++++||.....+......+|+...... ++..++....... ..
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~--------------~~ 84 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP--VITSNGAAIYYPK--------------EG 84 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh--eeccchhhhhccc--------------cc
Confidence 3458899999999999999999999999999999999999987422211 1111111000000 00
Q ss_pred CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhh-cCceEE
Q 001304 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK-ADIGVG 768 (1104)
Q Consensus 690 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~-AdvGIa 768 (1104)
.........+.+-.|..+..+.+.+....+.++++||+.+|+.|.+. +.-+|+
T Consensus 85 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 85 --------------------------LFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred --------------------------ccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 00001122333445555566666665556789999999999999998 444443
No 86
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.49 E-value=0.00042 Score=75.33 Aligned_cols=154 Identities=19% Similarity=0.300 Sum_probs=90.6
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC----CCeEEEe--cCCcHHHHH---------HHHHHHHHHcc--
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSI--DGKTEDEVC---------RSLERVLLTMR-- 684 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~----~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~-- 684 (1104)
++...+.++.++++||++...+..+.++.++..|+- .+..++. +.....+-. ..+++.+..+.
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 333457889999999999999999999999865531 1112222 111111111 11222332221
Q ss_pred -c---cCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhc----cceeeeccChh--hHHHHHHHHHhc----CCeEEEE
Q 001304 685 -I---TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS----RTAICCRVTPS--QKAQLVELLKSC----DYRTLAI 750 (1104)
Q Consensus 685 -~---~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~----~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~i 750 (1104)
. ......+.+..++.......++.+.+.+..-...+ +..-+.++.|. +|...|+.+++. .+.|+++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 1 11123355666666655555555555544322222 22335677786 799999999873 3578999
Q ss_pred cCCccChhhhhhcCceEEecCCchHH
Q 001304 751 GDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 751 GDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
||+.||.+||..++-||.+ ||+..+
T Consensus 188 GDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred eCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 9999999999999999999 776655
No 87
>PLN02423 phosphomannomutase
Probab=97.47 E-value=0.00094 Score=72.59 Aligned_cols=50 Identities=26% Similarity=0.406 Sum_probs=43.0
Q ss_pred eeeccChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhh-cCceEEecCCch
Q 001304 724 ICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQK-ADIGVGISGREG 774 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~-AdvGIam~g~~~ 774 (1104)
.+.+++|. +|+..++.|+ ..+.|+++|| |.||.+||+. .=.|+.++|.+.
T Consensus 179 ~~iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 179 ISFDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 57788887 7999999999 7788999999 8999999996 777888866554
No 88
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.44 E-value=0.00047 Score=72.96 Aligned_cols=123 Identities=19% Similarity=0.228 Sum_probs=79.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||.....+..+....|+...-.. ++..+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~--i~~~~--------------------------- 125 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH--VIGSD--------------------------- 125 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee--EEecC---------------------------
Confidence 6889999999999999999999999998888888888887321110 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee-c
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 770 (1104)
.....+=.|+-=..+++.++-..+.+++|||+.+|+.+-+.|++.. ++ .
T Consensus 126 -----------------------------~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~ 176 (205)
T TIGR01454 126 -----------------------------EVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALW 176 (205)
T ss_pred -----------------------------cCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 0000111121112233333334567999999999999999999975 33 1
Q ss_pred CC-chHH-HhhhcceecccchhhHH
Q 001304 771 GR-EGLQ-AARAADYSIGKFRFLKR 793 (1104)
Q Consensus 771 g~-~~~~-a~~~AD~vl~~f~~l~~ 793 (1104)
|. ...+ ....+|+++.+...+..
T Consensus 177 g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 177 GEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred cCCChhhhhhcCCCeeeCCHHHHHH
Confidence 22 1222 33478999888765543
No 89
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=97.41 E-value=0.00061 Score=73.26 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=81.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.|+++|+++.++||.....+..+.+..|+...-.. ++ .+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~--~~------------------------- 142 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VI--GG------------------------- 142 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EE--cC-------------------------
Confidence 46889999999999999999999999999999999998887432110 00 00
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc-eEE
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVG 768 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIa 768 (1104)
.. +.+..| +--..+++.++...+.+++|||+.||+.|.+.|++ +|+
T Consensus 143 ------------------------------~~-~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~ 191 (226)
T PRK13222 143 ------------------------------DS-LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVG 191 (226)
T ss_pred ------------------------------CC-CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEE
Confidence 00 001122 11122333333345679999999999999999999 556
Q ss_pred ec-CCc-hHHH-hhhcceecccchhhHHH
Q 001304 769 IS-GRE-GLQA-ARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 769 m~-g~~-~~~a-~~~AD~vl~~f~~l~~l 794 (1104)
+. |.. ..+. ...+|+++.++..+...
T Consensus 192 v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 192 VTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred ECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 52 211 1122 23688999887776554
No 90
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.34 E-value=0.0017 Score=70.65 Aligned_cols=176 Identities=15% Similarity=0.150 Sum_probs=92.5
Q ss_pred CCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHH--HcCCCCCCCCCeEEEecCCcH------------HHHHHHHHH
Q 001304 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTE------------DEVCRSLER 678 (1104)
Q Consensus 614 lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 678 (1104)
+-+++.++++.|.+. +..|+++||++......... .+++.... +..+..+|... .+....+.+
T Consensus 26 ~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h--G~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 103 (244)
T TIGR00685 26 VSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH--GCEMKDNGSCQDWVNLTEKIPSWKVRANELRE 103 (244)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec--CEEEecCCCcceeeechhhhhhHHHHHHHHHH
Confidence 457888999999766 56789999998765544321 12222211 11222233211 111122222
Q ss_pred HHHHccccCCCCCceEEEEcchhH---HHHHHHHHHHHHhHh-----hhccceeeeccChh--hHHHHHHHHHhc----C
Q 001304 679 VLLTMRITTSEPKDVAFVVDGWAL---EIALKHYRKAFTELA-----ILSRTAICCRVTPS--QKAQLVELLKSC----D 744 (1104)
Q Consensus 679 ~~~~~~~~~~~~~~~~lvi~g~~l---~~~~~~~~~~f~~l~-----~~~~~~i~~r~sP~--qK~~iV~~lk~~----~ 744 (1104)
......-..-+.+..++.+.-..- +.......+....+. .+.....+.++.|. +|+..++.+.+. .
T Consensus 104 ~~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~ 183 (244)
T TIGR00685 104 EITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSG 183 (244)
T ss_pred HHhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcccCC
Confidence 222221122234556666543211 111111111111111 11122233454454 799888877652 3
Q ss_pred CeEEEEcCCccChhhhhhc--------CceEEecCCchHHHhhhcceecccchhhHHH
Q 001304 745 YRTLAIGDGGNDVRMIQKA--------DIGVGISGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 745 ~~v~~iGDG~ND~~ml~~A--------dvGIam~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
..++++||+.||.+|++.+ ..||.| + .+ ..+..|++++.+...+..+
T Consensus 184 ~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v-~-~g-~~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 184 ISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI-G-SG-SKKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred CceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE-e-cC-CcCCCceEeCCCHHHHHHH
Confidence 5799999999999999999 477777 3 22 2345799999876655443
No 91
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.32 E-value=0.00091 Score=74.01 Aligned_cols=119 Identities=21% Similarity=0.239 Sum_probs=78.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.++++.|+++|+++.++||.....+..+....|+...-.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~---------------------------------- 145 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR---------------------------------- 145 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----------------------------------
Confidence 4688999999999999999999999998888888877777622100
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH--HHHHH-HHHh---cCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVE-LLKS---CDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK--~~iV~-~lk~---~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++...+..| ...++ .+++ ..+.+++|||+.||+.|.+.|++
T Consensus 146 ------------------------------~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 146 ------------------------------WIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGV 195 (272)
T ss_pred ------------------------------EEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCC
Confidence 112222222222 22222 2222 34679999999999999999998
Q ss_pred e-EEec-CC-chHHHh-hhcceecccchhhHHH
Q 001304 766 G-VGIS-GR-EGLQAA-RAADYSIGKFRFLKRL 794 (1104)
Q Consensus 766 G-Iam~-g~-~~~~a~-~~AD~vl~~f~~l~~l 794 (1104)
. +++. |. ...+.. ..+|+++.+...|..+
T Consensus 196 ~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 196 QCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred eEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 4 4442 21 222223 3789999876666544
No 92
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.29 E-value=0.00077 Score=71.71 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=77.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+...-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----------------------------------- 129 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----------------------------------- 129 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc-----------------------------------
Confidence 578999999999999999999999999999999998888733211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee----ccChhhHHHHHHHHHh---cCCeEEEEcCCccChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC----RVTPSQKAQLVELLKS---CDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~----r~sP~qK~~iV~~lk~---~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++ +..|. ..-+.+.+++ ..+.+++|||+.+|+.|.+.|++
T Consensus 130 -----------------------------~~~~~~~~~~~Kp~-p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~ 179 (213)
T TIGR01449 130 -----------------------------VLIGGDSLAQRKPH-PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGC 179 (213)
T ss_pred -----------------------------EEEecCCCCCCCCC-hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCC
Confidence 01111 11121 1122223333 34679999999999999999998
Q ss_pred eEE-ec-CCchH-HH-hhhcceecccchhhH
Q 001304 766 GVG-IS-GREGL-QA-ARAADYSIGKFRFLK 792 (1104)
Q Consensus 766 GIa-m~-g~~~~-~a-~~~AD~vl~~f~~l~ 792 (1104)
-.. +. |.... .. ...+|+++.++..+.
T Consensus 180 ~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~ 210 (213)
T TIGR01449 180 PSVLLTYGYRYGEAIDLLPPDVLYDSLNELP 210 (213)
T ss_pred eEEEEccCCCCCcchhhcCCCeEeCCHHHHH
Confidence 873 31 22111 12 236899888766543
No 93
>PLN02580 trehalose-phosphatase
Probab=97.25 E-value=0.0053 Score=69.89 Aligned_cols=177 Identities=15% Similarity=0.171 Sum_probs=94.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-------------------ecCCc------
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-------------------IDGKT------ 668 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-------------------~~~~~------ 668 (1104)
+-++++++++.|.+.. .|.++|||..........-.++.-.+..+.-+. ..|.+
T Consensus 142 ~s~~~~~aL~~La~~~-~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 220 (384)
T PLN02580 142 MSDAMRSAVKNVAKYF-PTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQP 220 (384)
T ss_pred CCHHHHHHHHHHhhCC-CEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCccccccccccccccccccccccccc
Confidence 4578889999998874 899999999998877664433311111110000 00110
Q ss_pred HHHHH---HHHHHHHHHc----cccCCCCCceEEEEcch-----hHHHHHHHHHHHHHhHh--hhccceeeeccChh---
Q 001304 669 EDEVC---RSLERVLLTM----RITTSEPKDVAFVVDGW-----ALEIALKHYRKAFTELA--ILSRTAICCRVTPS--- 731 (1104)
Q Consensus 669 ~~~~~---~~~~~~~~~~----~~~~~~~~~~~lvi~g~-----~l~~~~~~~~~~f~~l~--~~~~~~i~~r~sP~--- 731 (1104)
..+.. ..+.+.+... .-..-+.+..++.+.-. .-+...+...+...... .+....-+.++.|.
T Consensus 221 a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~ 300 (384)
T PLN02580 221 ASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDW 300 (384)
T ss_pred chhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCC
Confidence 00111 1111111111 11222455666654322 11222222222221111 11122345678874
Q ss_pred hHHHHHHHHHhc-C---C---eEEEEcCCccChhhhhh-----cCceEEecCCchHHHhhhcceecccchhhHHH
Q 001304 732 QKAQLVELLKSC-D---Y---RTLAIGDGGNDVRMIQK-----ADIGVGISGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 732 qK~~iV~~lk~~-~---~---~v~~iGDG~ND~~ml~~-----AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+|+..|+.+.+. + . .++++||+.||..|++. +++||+| |+... .-.|+|.|.+-..+..+
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~V-gn~~~--~t~A~y~L~dp~eV~~~ 372 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILV-SSVPK--ESNAFYSLRDPSEVMEF 372 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEE-ecCCC--CccceEEcCCHHHHHHH
Confidence 899999987652 2 1 25899999999999996 6899999 54321 12688988876555444
No 94
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.09 E-value=0.0017 Score=69.15 Aligned_cols=124 Identities=19% Similarity=0.181 Sum_probs=78.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||.....+..+....|+...-.. ++..+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--i~~~~--------------------------- 132 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV--VITLD--------------------------- 132 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE--EEecC---------------------------
Confidence 3789999999999999999999999999998888888887432110 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee-c
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 770 (1104)
..-..+-.|+--..+++.+.-....+++|||+.+|+.+-+.|++-. ++ .
T Consensus 133 -----------------------------~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~ 183 (214)
T PRK13288 133 -----------------------------DVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAW 183 (214)
T ss_pred -----------------------------cCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence 0000011122112233333333467999999999999999999854 23 1
Q ss_pred CCc-hHHHh-hhcceecccchhhHHH
Q 001304 771 GRE-GLQAA-RAADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 g~~-~~~a~-~~AD~vl~~f~~l~~l 794 (1104)
|.. ..+.. ..+|+++.+++.+..+
T Consensus 184 g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 184 TIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred CCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 321 22232 3589988877665543
No 95
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.03 E-value=0.0017 Score=69.56 Aligned_cols=116 Identities=11% Similarity=0.078 Sum_probs=77.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++-+++.++++.|++.|+++.++||.....+..+.+..|+...-..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 137 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--------------------------------- 137 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE---------------------------------
Confidence 46789999999999999999999999999988888888887432110
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec----cChhhHHHHHHHHHhc---CCeEEEEcCCccChhhhhhcC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR----VTPSQKAQLVELLKSC---DYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r----~sP~qK~~iV~~lk~~---~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
++++. ..|.-. -+...+++. .+.+++|||+.||+.+-+.|+
T Consensus 138 -------------------------------~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG 185 (222)
T PRK10826 138 -------------------------------LASAEKLPYSKPHPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAAR 185 (222)
T ss_pred -------------------------------EEEcccCCCCCCCHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcC
Confidence 11111 111111 122233333 367999999999999999999
Q ss_pred ceEEecCC--chHHH-hhhcceecccchhhH
Q 001304 765 IGVGISGR--EGLQA-ARAADYSIGKFRFLK 792 (1104)
Q Consensus 765 vGIam~g~--~~~~a-~~~AD~vl~~f~~l~ 792 (1104)
+....-.. ...+. ...||+++.++..+.
T Consensus 186 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 186 MRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 87643222 12112 225788888776653
No 96
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.97 E-value=0.0026 Score=68.52 Aligned_cols=124 Identities=19% Similarity=0.159 Sum_probs=79.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.+...+..+....|+...-. .+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~---~i------------------------------ 141 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA---VL------------------------------ 141 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc---EE------------------------------
Confidence 578999999999999999999999999888877777777632110 00
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee-c
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 770 (1104)
+.+. ..-..+=.|+-=..+++.+.-..+.+++|||+.+|+.|-+.|++.. ++ .
T Consensus 142 ----~~~~---------------------~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 142 ----IGGD---------------------TLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred ----EecC---------------------cCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 0000 0000011222112334444434577999999999999999999885 33 1
Q ss_pred CCc-h-HHH-hhhcceecccchhhHHH
Q 001304 771 GRE-G-LQA-ARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 g~~-~-~~a-~~~AD~vl~~f~~l~~l 794 (1104)
|.. . ... ...+|+++.++..|...
T Consensus 197 g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 197 GYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred cCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 211 1 112 23689999887766443
No 97
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=96.97 E-value=0.0034 Score=68.83 Aligned_cols=124 Identities=15% Similarity=0.170 Sum_probs=81.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.++++++++.|+++|+++.++|+.....+..+...+|+...-.. ++..+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~~~d-------------------------- 160 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLAAED-------------------------- 160 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEeccc--------------------------
Confidence 5789999999999999999999999999999988888887432110 110000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-EecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am~g 771 (1104)
.-..+=.|+-=..+++.+.-....+++|||..+|+.+=+.|++-. ++.|
T Consensus 161 ------------------------------~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 161 ------------------------------VYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred ------------------------------CCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 000001111111223333333467999999999999999999955 5544
Q ss_pred CchHHHhhhcceecccchhhHHH
Q 001304 772 REGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 772 ~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
.........+|+++.+++.+...
T Consensus 211 ~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 211 KHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CCchhhhccCCEEeCCHHHHHHH
Confidence 43333334689998887766544
No 98
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=96.91 E-value=0.0048 Score=68.09 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=78.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+...-.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~----------------------------------- 186 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS----------------------------------- 186 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE-----------------------------------
Confidence 578999999999999999999999999999999999998732210
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh---cCCeEEEEcCCccChhhhhhcCceEE-
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS---CDYRTLAIGDGGNDVRMIQKADIGVG- 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~---~~~~v~~iGDG~ND~~ml~~AdvGIa- 768 (1104)
.++.++..+..+.-+.+.+++ ..+.+++|||+.+|+.+-+.|++-..
T Consensus 187 -----------------------------~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 187 -----------------------------VVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVA 237 (273)
T ss_pred -----------------------------EEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEE
Confidence 001111111111122223332 34579999999999999999998752
Q ss_pred e-cCCch-HHH-hhhcceecccchhhHHH
Q 001304 769 I-SGREG-LQA-ARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 769 m-~g~~~-~~a-~~~AD~vl~~f~~l~~l 794 (1104)
+ .|... .+. ...+|+++.+...+..+
T Consensus 238 v~~g~~~~~~l~~~~ad~~i~~~~eL~~~ 266 (273)
T PRK13225 238 VTWGFNDRQSLVAACPDWLLETPSDLLQA 266 (273)
T ss_pred EecCCCCHHHHHHCCCCEEECCHHHHHHH
Confidence 2 23222 112 23689999887666543
No 99
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=96.87 E-value=0.00078 Score=56.39 Aligned_cols=44 Identities=20% Similarity=0.190 Sum_probs=37.3
Q ss_pred ccccCCCCceeecCC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001304 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWS 59 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~ 59 (1104)
+|+++||.|+++..+ .++| +.+++||.++++++++++++++++.
T Consensus 18 ~r~~~~G~N~l~~~~~~s~~----~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 18 RRLERYGPNELPPPKKRSPL----LRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 588899999999987 4555 8899999999998888888887753
No 100
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.78 E-value=0.0078 Score=63.70 Aligned_cols=106 Identities=18% Similarity=0.153 Sum_probs=72.8
Q ss_pred cCCCChHHHHH-HHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIE-TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~-~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.+.|++.++|+ .++++|++++++|+-....+..+|+..++..... ++..+ .+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~---~i~t~-le----------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN---LIASQ-IE----------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc---EEEEE-eE-----------------------
Confidence 47899999996 7899999999999999999999999866643211 22111 00
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHH-hcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk-~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
+.+|- ....-.+..++|..-++..- .......+-||+.||.|||+.||.++++.
T Consensus 147 ----~~~gg---------------------~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 147 ----RGNGG---------------------WVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ----EeCCc---------------------eEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 00110 00112355677877665432 22245679999999999999999999993
No 101
>PRK11587 putative phosphatase; Provisional
Probab=96.70 E-value=0.0062 Score=65.11 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=72.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.||+.++++.|+++|+++.++|+.....+...-...|+... .. ++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~--i~------------------------------ 129 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EV--FV------------------------------ 129 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cE--EE------------------------------
Confidence 5789999999999999999999999877666555556665211 00 11
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce-EEe
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam 769 (1104)
.++. + .+.-|. -=..+.+.+.-..+.+++|||..+|+.+=+.|++. |++
T Consensus 130 -----~~~~----------------------~-~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v 181 (218)
T PRK11587 130 -----TAER----------------------V-KRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV 181 (218)
T ss_pred -----EHHH----------------------h-cCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEE
Confidence 0000 0 001121 11122233322347799999999999999999985 466
Q ss_pred cCCchHHHhhhcceecccchhh
Q 001304 770 SGREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l 791 (1104)
...........+|+++.+++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 182 NAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CCCCchhhhccCCEEecchhhe
Confidence 3322222223688888776544
No 102
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.65 E-value=0.0083 Score=65.75 Aligned_cols=42 Identities=26% Similarity=0.222 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
++-+|+.++++.|+++|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999998888888888743
No 103
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.62 E-value=0.0096 Score=67.97 Aligned_cols=122 Identities=16% Similarity=0.200 Sum_probs=80.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+|+.++++.|+++|+++.++|+.....+..+-+..||...-.. ++.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~--Iv~----------------------------- 264 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV--IVA----------------------------- 264 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE--EEe-----------------------------
Confidence 4779999999999999999999999999999999998887432110 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am 769 (1104)
+ ..+ .+-.|. -=...++.+.-..+.+++|||..+|+.+-+.|++-. ++
T Consensus 265 ------s----------------------ddv-~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV 315 (381)
T PLN02575 265 ------A----------------------EDV-YRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAV 315 (381)
T ss_pred ------c----------------------CcC-CCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0 000 011121 112233333334577999999999999999999876 44
Q ss_pred cCCchHHHhhhcceecccchhhHHH
Q 001304 770 SGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
.+.........||+++.+++.+...
T Consensus 316 ~~~~~~~~l~~Ad~iI~s~~EL~~~ 340 (381)
T PLN02575 316 ASKHPIYELGAADLVVRRLDELSIV 340 (381)
T ss_pred CCCCChhHhcCCCEEECCHHHHHHH
Confidence 2211111123589998887776443
No 104
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.60 E-value=0.015 Score=64.23 Aligned_cols=41 Identities=24% Similarity=0.174 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++-+|+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56899999999999999999999999988877777766653
No 105
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=96.52 E-value=0.042 Score=69.86 Aligned_cols=187 Identities=19% Similarity=0.219 Sum_probs=99.1
Q ss_pred CcEEEEEEeecccCCCChHHHHHHH-HHcCCeEEEEcCCCHhHHHHHHHHc---CCCCCCCCCeEEEecCCc------H-
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETL-RKAGINFWMLTGDKQNTAIQIALSC---NFISPEPKGQLLSIDGKT------E- 669 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l-~~aGI~v~mlTGD~~~ta~~ia~~~---gi~~~~~~~~~~~~~~~~------~- 669 (1104)
|.+|+-.....-.+.+++.+++++| ++.|+.|+++||+...+.......+ +++..+ |..+...+.. .
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEH--G~~ir~~~~~~w~~~~~~ 681 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEH--GYFLRLKRDVEWETCVPV 681 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeC--CEEEEeCCCceeeecchh
Confidence 4444433222235567889999997 7889999999999999988776543 333322 2222222211 0
Q ss_pred -HH-HHHHHHHHHHHc----cccCCCCCceEEEEcchhHH---------HHHHHHHHHHHhHh-hhccceeeeccChh--
Q 001304 670 -DE-VCRSLERVLLTM----RITTSEPKDVAFVVDGWALE---------IALKHYRKAFTELA-ILSRTAICCRVTPS-- 731 (1104)
Q Consensus 670 -~~-~~~~~~~~~~~~----~~~~~~~~~~~lvi~g~~l~---------~~~~~~~~~f~~l~-~~~~~~i~~r~sP~-- 731 (1104)
+. .........+.+ .-+.-+.+..+++.+-...+ .....+.+.+.... .+....-+.++.|.
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gv 761 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGV 761 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCC
Confidence 11 111122222222 11112344556654432220 11111222221110 11122334566776
Q ss_pred hHHHHHHHHHh----cC---CeEEEEcCCccChhhhhhcC--------------ceEEecCCchHHHhhhcceecccchh
Q 001304 732 QKAQLVELLKS----CD---YRTLAIGDGGNDVRMIQKAD--------------IGVGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 732 qK~~iV~~lk~----~~---~~v~~iGDG~ND~~ml~~Ad--------------vGIam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
+|+..++.+.+ .| ..++++||+.||.+|++.++ ++|.+ |.. ...|.|-+.+-..
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~~----~S~A~y~L~d~~e 836 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQK----PSKAKYYLDDTAE 836 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CCC----CccCeEecCCHHH
Confidence 69999988753 23 47999999999999999886 44555 432 1356676766544
Q ss_pred hHHH
Q 001304 791 LKRL 794 (1104)
Q Consensus 791 l~~l 794 (1104)
+..+
T Consensus 837 V~~l 840 (854)
T PLN02205 837 IVRL 840 (854)
T ss_pred HHHH
Confidence 4443
No 106
>PRK11590 hypothetical protein; Provisional
Probab=96.52 E-value=0.017 Score=61.25 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=73.1
Q ss_pred cCCCChHHHH-HHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I-~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.+.|++.++| +.+++.|++++++|+-...-+..++...|+... .+ ++..+- +
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~-~~--~i~t~l-~----------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR-VN--LIASQM-Q----------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc-Cc--eEEEEE-E-----------------------
Confidence 4589999999 578899999999999999999999999886321 11 221110 0
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-HhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
...+| ......+..+.|..-++.. ........+-||+.||.|||+.|+.++++.
T Consensus 148 ---~~~tg----------------------~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 148 ---RRYGG----------------------WVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred ---EEEcc----------------------EECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 00011 0111235567787766643 323345679999999999999999999993
No 107
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=96.51 E-value=0.0011 Score=56.48 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=34.2
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQ 56 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~ 56 (1104)
+|+++||+|+++..+. ++| +.+++||.++++++++++++++
T Consensus 28 ~r~~~~G~N~l~~~~~~s~~----~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 28 ERRKKYGPNELPEPKKKSLW----RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHSSSSTTTTTSSSHH----HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHhcccccccccccCcHH----HHHHHHHHhHHHHHHHHHHHHC
Confidence 5888999999977665 555 8999999999998888887764
No 108
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.50 E-value=0.0088 Score=63.97 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=38.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.++.+|+.+.++.|+++|+++.++||-....+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999988888874
No 109
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.49 E-value=0.021 Score=57.27 Aligned_cols=105 Identities=18% Similarity=0.166 Sum_probs=68.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH---HHHHHc---CCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHcc
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI---QIALSC---NFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMR 684 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~---~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1104)
+|.+.+++.+++++++++|++++++||+....+. ....++ |.--+. +.++..+|....+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~----------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALH----------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhh-----------
Confidence 5788999999999999999999999999988874 444442 211111 224444443321110
Q ss_pred ccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh-hHHHHHHHHHh-----cCCeEEEEcCCccChh
Q 001304 685 ITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS-QKAQLVELLKS-----CDYRTLAIGDGGNDVR 758 (1104)
Q Consensus 685 ~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~-qK~~iV~~lk~-----~~~~v~~iGDG~ND~~ 758 (1104)
+ .+. .-.|+ .|...++.+.+ ....++++||+.+|+.
T Consensus 92 ------------------------------------~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~ 133 (157)
T smart00775 92 ------------------------------------R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVI 133 (157)
T ss_pred ------------------------------------c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHH
Confidence 0 001 11232 36666666665 2356788999999999
Q ss_pred hhhhcCce
Q 001304 759 MIQKADIG 766 (1104)
Q Consensus 759 ml~~AdvG 766 (1104)
+-++++|-
T Consensus 134 ~y~~~gi~ 141 (157)
T smart00775 134 SYSAVGIP 141 (157)
T ss_pred HHHHcCCC
Confidence 99988774
No 110
>PLN03017 trehalose-phosphatase
Probab=96.33 E-value=0.1 Score=59.12 Aligned_cols=191 Identities=14% Similarity=0.151 Sum_probs=100.9
Q ss_pred cCcEEEEEEeecc--cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC----------
Q 001304 600 HDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------- 667 (1104)
Q Consensus 600 ~~l~llG~i~i~D--~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~---------- 667 (1104)
-|.+|+-++.-.| .+.+++.++|++|. .|++++++||+....+..+..-.++.--..++..+...+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~ 196 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQ 196 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceecccccc
Confidence 3566665554333 47789999999999 7899999999999998877322111000111111110000
Q ss_pred -----cHHHHHHHHHHH---HHH----ccccCCCCCceEEEEcchhH-----HHHHHHHHHHHHhHh--hhccceeeecc
Q 001304 668 -----TEDEVCRSLERV---LLT----MRITTSEPKDVAFVVDGWAL-----EIALKHYRKAFTELA--ILSRTAICCRV 728 (1104)
Q Consensus 668 -----~~~~~~~~~~~~---~~~----~~~~~~~~~~~~lvi~g~~l-----~~~~~~~~~~f~~l~--~~~~~~i~~r~ 728 (1104)
...+....++.. +.. ..-..-+.+..++.+.-... ..+............ .+....-..++
T Consensus 197 ~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEv 276 (366)
T PLN03017 197 SLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEI 276 (366)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEe
Confidence 000011112222 211 11122245566665533221 122222222111111 11223344566
Q ss_pred Chh---hHHHHHHHHHhc-------CCeEEEEcCCccChhhhhhc-----CceEEecCCchHHHhhhcceecccchhhHH
Q 001304 729 TPS---QKAQLVELLKSC-------DYRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 729 sP~---qK~~iV~~lk~~-------~~~v~~iGDG~ND~~ml~~A-----dvGIam~g~~~~~a~~~AD~vl~~f~~l~~ 793 (1104)
.|. +|+..|+.+.+. +..++++||...|-.|++.. ++||-+ |... -...|+|.|.+-.....
T Consensus 277 RP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~--k~T~A~y~L~dp~eV~~ 353 (366)
T PLN03017 277 RPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFP--KDTDASYSLQDPSEVMD 353 (366)
T ss_pred cCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCC--CCCcceEeCCCHHHHHH
Confidence 763 899999987752 23589999999999999866 355555 4311 12468898877555444
Q ss_pred H
Q 001304 794 L 794 (1104)
Q Consensus 794 l 794 (1104)
+
T Consensus 354 f 354 (366)
T PLN03017 354 F 354 (366)
T ss_pred H
Confidence 3
No 111
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.29 E-value=0.0078 Score=64.49 Aligned_cols=40 Identities=13% Similarity=0.240 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCC----CHhHHHHHHHHcCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGD----KQNTAIQIALSCNFI 653 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD----~~~ta~~ia~~~gi~ 653 (1104)
+.+++++.++.++++|+++.++|++ ...++..+.+..|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 4455999999999999999999998 667889999889983
No 112
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.22 E-value=0.022 Score=62.23 Aligned_cols=115 Identities=13% Similarity=0.116 Sum_probs=78.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++.++++.|++.|+++.++|+-....+....+..|+...-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----------------------------------- 152 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----------------------------------- 152 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc-----------------------------------
Confidence 578999999999999999999999999999999888888743211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
.+++++- .|+-=..+.+.+.-..+.+++|||+.+|+.+=+.|++-
T Consensus 153 -----------------------------~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 153 -----------------------------AVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred -----------------------------EEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCE
Confidence 1111111 11111223333333446799999999999999999986
Q ss_pred E-Ee-cCCchHHHhh-hcceecccchhh
Q 001304 767 V-GI-SGREGLQAAR-AADYSIGKFRFL 791 (1104)
Q Consensus 767 I-am-~g~~~~~a~~-~AD~vl~~f~~l 791 (1104)
. ++ .|....+... .+|+++.++..+
T Consensus 204 ~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 204 VVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred EEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 5 33 1322222222 689998877653
No 113
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.12 E-value=0.047 Score=59.54 Aligned_cols=44 Identities=16% Similarity=0.327 Sum_probs=40.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~ 656 (1104)
++++|+.+.++.|+++|+++.++||-....+..+.++.|+..+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 47999999999999999999999999999999999999986544
No 114
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.08 E-value=0.014 Score=61.17 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=38.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.+++.++++++++.|+++|+++.++||.....+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4556778899999999999999999999999999999999984
No 115
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.03 E-value=0.016 Score=62.12 Aligned_cols=40 Identities=15% Similarity=0.227 Sum_probs=34.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC----HhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK----QNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~----~~ta~~ia~~~gi 652 (1104)
.+.+++++.++.+++.|+++.++||+. ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999974 5588888888887
No 116
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.01 E-value=0.025 Score=67.79 Aligned_cols=120 Identities=14% Similarity=0.123 Sum_probs=78.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.||+.++++.|++.|+++.++|+.....+..+...+|+...-.. ++..+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~--i~~~d~-------------------------- 381 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE--TFSIEQ-------------------------- 381 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce--eEecCC--------------------------
Confidence 6789999999999999999999999999999999998887432111 111000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCceE-Eec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV-GIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGI-am~ 770 (1104)
+-..-.|+ -+...+++ ..+.+++|||+.+|+.+-+.|++-. ++.
T Consensus 382 -------------------------------v~~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~ 427 (459)
T PRK06698 382 -------------------------------INSLNKSD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCN 427 (459)
T ss_pred -------------------------------CCCCCCcH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEe
Confidence 00000121 11122222 2356999999999999999999854 441
Q ss_pred -CCchHHHhhhcceecccchhhHHH
Q 001304 771 -GREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 -g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+....+....+|+++.+++.+..+
T Consensus 428 ~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 428 FDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred CCCCcccccCCCCEEeCCHHHHHHH
Confidence 211111223689999887766554
No 117
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=95.98 E-value=0.023 Score=60.73 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=36.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|++++++|+-....+....+..|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999988888877777776
No 118
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=95.90 E-value=0.074 Score=54.29 Aligned_cols=148 Identities=24% Similarity=0.315 Sum_probs=83.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecC-CcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
++-|++.+|++.|++.=-.+ ++|---..-+..+|..+|+-..+..+.-..++. ..+++.. +..+..+..
T Consensus 83 ~lvPgA~etm~~l~~~~tp~-v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR---~E~L~~~~~------ 152 (315)
T COG4030 83 KLVPGAEETMATLQERWTPV-VISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER---EELLSIIDV------ 152 (315)
T ss_pred ccCCChHHHHHHHhccCCce-EEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHH---HHHHHhcCc------
Confidence 46799999999998764444 444445556788888888843322211222331 1112211 122221110
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh---------------hHHHHHHHHHhc---CCeEEEEcCC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS---------------QKAQLVELLKSC---DYRTLAIGDG 753 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~---------------qK~~iV~~lk~~---~~~v~~iGDG 753 (1104)
.-.++|+.|-.-+++ +|.|..|. .|+.+++.+.+. ..-.+++||+
T Consensus 153 --~~~~~geelfe~lDe---------------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDS 215 (315)
T COG4030 153 --IASLSGEELFEKLDE---------------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDS 215 (315)
T ss_pred --cccccHHHHHHHHHH---------------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCc
Confidence 112344433322222 22333443 355666655542 2346899999
Q ss_pred ccChhhhhhcC----ceEEecCCchHHHhhhcceecccch
Q 001304 754 GNDVRMIQKAD----IGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 754 ~ND~~ml~~Ad----vGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
+.|+.||+++. +.|+..||+- |.+.||+.+..-.
T Consensus 216 ItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~ 253 (315)
T COG4030 216 ITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPT 253 (315)
T ss_pred ccchHHHHHhhccCceEEEecCCcc--cccccceEEeccc
Confidence 99999999874 5567777765 7789999886533
No 119
>PRK06769 hypothetical protein; Validated
Probab=95.80 E-value=0.044 Score=56.14 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=31.7
Q ss_pred cCcEEEEEEeecc----cCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 600 HDLKVLGVTAIED----RLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 600 ~~l~llG~i~i~D----~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
.|.++.|-..+.+ ++.++++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4555555544443 3689999999999999999999998753
No 120
>PLN02811 hydrolase
Probab=95.54 E-value=0.039 Score=59.00 Aligned_cols=31 Identities=23% Similarity=0.346 Sum_probs=27.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTA 643 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta 643 (1104)
++.+++.++|+.|+++|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999998765533
No 121
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=95.51 E-value=0.045 Score=57.39 Aligned_cols=40 Identities=13% Similarity=0.259 Sum_probs=36.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|+++.++|+-+...+..+....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999988888888888887
No 122
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.50 E-value=0.037 Score=62.29 Aligned_cols=107 Identities=17% Similarity=0.087 Sum_probs=72.2
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC-CCCCCeEEEecCCcHHHHHHHHHHHHHHccccCC
Q 001304 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-PEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (1104)
Q Consensus 610 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (1104)
..+++.+++.++++.|++.|++++++||+....+..+...+|+.. .-.. +.+.+..
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~-----i~~~~~~------------------ 240 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD-----LIGRPPD------------------ 240 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh-----hhCCcch------------------
Confidence 567899999999999999999999999999999999888888743 1000 0000000
Q ss_pred CCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCceE
Q 001304 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 689 ~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
..|. +..---+-.|.-+...++.+.. ....++|+||..+|+.+-+.|++-+
T Consensus 241 ----------------------~~~~------~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 241 ----------------------MHFQ------REQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ----------------------hhhc------ccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0000 0000012234455555555433 3378999999999999999999986
No 123
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.48 E-value=0.045 Score=58.68 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+|+.++++.|+++|+++.++|+-....+.......|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l 132 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGL 132 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCc
Confidence 5789999999999999999999999888887777777776
No 124
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.36 E-value=0.061 Score=53.31 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=67.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.++|+-++.++.+++.+|.++++||-...-...+-...+ ..+. +.+++-. ..+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke~---i~~idi~----------------------sn~ 125 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKER---IYCIDIV----------------------SNN 125 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--cccc---eeeeEEe----------------------ecC
Confidence 478999999999999999999998876554444444332 1100 0000000 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIa 768 (1104)
..+-++|. ...++-.-+| .+|...|+.+++..+.+.++|||+.|++|-+.+|+=.|
T Consensus 126 ~~ih~dg~--------------------h~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 126 DYIHIDGQ--------------------HSIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ceEcCCCc--------------------eeeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 00011110 0111111122 37999999999998999999999999999888887554
No 125
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.35 E-value=0.11 Score=53.05 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=43.3
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCC-CHhHHHHHHHHcCCC
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCNFI 653 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~ta~~ia~~~gi~ 653 (1104)
+.......+-+-++.+++.++++.|+++|+++.++|+- ....+..+....|+.
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 33455555556678999999999999999999999976 888888888888873
No 126
>PLN02940 riboflavin kinase
Probab=95.33 E-value=0.045 Score=63.58 Aligned_cols=40 Identities=10% Similarity=0.165 Sum_probs=33.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHH-HcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL-SCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~-~~gi 652 (1104)
++.+|+.++++.|++.|+++.++|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998887766554 4565
No 127
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.33 E-value=0.035 Score=56.47 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=39.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
..++.+++.+.++.|+++|++++++|+.....+....+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4568999999999999999999999999999888999998874
No 128
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.32 E-value=0.11 Score=53.73 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=34.7
Q ss_pred cCCeEEEEcCCccChhhhhhcCceE-Ee-cCCchH-HHhhhc--ceecccchhhHHH
Q 001304 743 CDYRTLAIGDGGNDVRMIQKADIGV-GI-SGREGL-QAARAA--DYSIGKFRFLKRL 794 (1104)
Q Consensus 743 ~~~~v~~iGDG~ND~~ml~~AdvGI-am-~g~~~~-~a~~~A--D~vl~~f~~l~~l 794 (1104)
..+.+++|||+.+|+.+-+.|++.. ++ .|.... .....+ |+++.++..+..+
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 4478999999999999999999865 23 122111 112245 8888877666554
No 129
>PRK09449 dUMP phosphatase; Provisional
Probab=95.28 E-value=0.07 Score=57.16 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=33.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 46899999999999 6899999999888777777777776
No 130
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.22 E-value=0.083 Score=58.89 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=32.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
++.|++.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998887776655544
No 131
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=95.21 E-value=0.086 Score=51.20 Aligned_cols=40 Identities=18% Similarity=0.269 Sum_probs=34.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC--------HhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK--------QNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~--------~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|+++.++|+.. ...+..+....|+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 578999999999999999999999988 6666777777776
No 132
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=94.90 E-value=0.052 Score=56.15 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=33.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
-++.+|+.++++.|+++|+++.++|+. ..+..+.+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 368999999999999999999999987 556666777776
No 133
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=94.74 E-value=0.048 Score=56.37 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=30.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.|++.++++.|+++|+++.++|+... +....+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3455666666
No 134
>PLN02151 trehalose-phosphatase
Probab=94.60 E-value=0.24 Score=55.99 Aligned_cols=177 Identities=13% Similarity=0.172 Sum_probs=92.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-e-cC------------CcHHHHHHHHHHH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-I-DG------------KTEDEVCRSLERV 679 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-~-~~------------~~~~~~~~~~~~~ 679 (1104)
+.++++++|+.|. ++..+.++||+.......+..-.++.-.+.++.-+. . .+ ....+....++..
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v 199 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEV 199 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccchhhHHHHHHH
Confidence 5678889999999 567999999999998877664333211111111111 0 00 0000111112222
Q ss_pred HHHc-------cccCCCCCceEEEEcchh-----HHHHHHHHHHHHHhHh--hhccceeeeccChh---hHHHHHHHHHh
Q 001304 680 LLTM-------RITTSEPKDVAFVVDGWA-----LEIALKHYRKAFTELA--ILSRTAICCRVTPS---QKAQLVELLKS 742 (1104)
Q Consensus 680 ~~~~-------~~~~~~~~~~~lvi~g~~-----l~~~~~~~~~~f~~l~--~~~~~~i~~r~sP~---qK~~iV~~lk~ 742 (1104)
...+ .-..-+.+.+++.+.-.. ...+.....+...... .+....-..++.|. +|+..|+.+.+
T Consensus 200 ~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~ 279 (354)
T PLN02151 200 YKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLE 279 (354)
T ss_pred HHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 1111 112224556666653321 1222222222111111 11223334566664 89999998775
Q ss_pred c-C------CeEEEEcCCccChhhhhhc-----CceEEecCCchHHHhhhcceecccchhhHHH
Q 001304 743 C-D------YRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 743 ~-~------~~v~~iGDG~ND~~ml~~A-----dvGIam~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
. + ..++++||-..|-.|++.. ++||-+ |... -.-.|+|.|.+-.-...+
T Consensus 280 ~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-g~~~--k~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 280 SLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILV-SKYA--KETNASYSLQEPDEVMEF 340 (354)
T ss_pred hcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEe-ccCC--CCCcceEeCCCHHHHHHH
Confidence 3 2 2489999999999999864 566655 3211 112789999876555444
No 135
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=94.46 E-value=0.11 Score=53.37 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=32.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|++++++|+-.... ..+..++|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l 123 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGL 123 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCC
Confidence 578999999999999999999999988777 544445776
No 136
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=94.43 E-value=0.12 Score=55.21 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=35.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+++.++++.|++. +++.++|+-....+..+..+.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888873
No 137
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.22 E-value=0.052 Score=53.99 Aligned_cols=40 Identities=13% Similarity=0.016 Sum_probs=36.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
-+++|++.+.++.|+ .++++.++|+-....+..+...+++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 357999999999999 5799999999999999998888876
No 138
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=93.87 E-value=0.3 Score=53.35 Aligned_cols=43 Identities=7% Similarity=0.226 Sum_probs=33.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhH---HHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---a~~ia~~~gi~ 653 (1104)
..++-+++.+.++.+++.|+++.++|++.... +....+..|+-
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 34577999999999999999999999987443 33445566763
No 139
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=93.73 E-value=0.77 Score=47.16 Aligned_cols=38 Identities=11% Similarity=0.185 Sum_probs=32.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
+.+.+.+.+|+++|+.|+.+|......-...-+++|+-
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 34678999999999999999999888888888888875
No 140
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=93.61 E-value=2.2 Score=46.45 Aligned_cols=50 Identities=12% Similarity=0.170 Sum_probs=40.3
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcC---CCHhHHHHHHHHcCCCCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 655 (1104)
|.+--.+.+-+++.++|+.|+++|++++++|| +.........++.|+-..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 33444566667999999999999999999996 778888888888987443
No 141
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=93.58 E-value=0.21 Score=50.95 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=33.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC-HhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~ta~~ia~~~gi 652 (1104)
.+.++++++++.|++.|+++.++|+.+ ...+..+++.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5666666666665
No 142
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=93.34 E-value=1.6 Score=46.67 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=36.9
Q ss_pred cCCCChHHHHHHH--HHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 613 RLQDGVPETIETL--RKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 613 ~lr~~~~~~I~~l--~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
|+.++.+++++.+ ++.|+.+.++|.-+..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 4789999999999 56899999999999998888999888743
No 143
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=93.34 E-value=0.21 Score=52.58 Aligned_cols=39 Identities=8% Similarity=0.133 Sum_probs=31.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++-+++.++++.|+++|+++.++|+-... +.......|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999986543 4556666666
No 144
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=93.23 E-value=0.29 Score=48.59 Aligned_cols=27 Identities=30% Similarity=0.442 Sum_probs=24.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK 639 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~ 639 (1104)
++.+++.++++.|+++|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999875
No 145
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=92.90 E-value=0.23 Score=47.96 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC-CHhHHHHHHHHcC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCN 651 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~ta~~ia~~~g 651 (1104)
++.+++.++++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6776666665555
No 146
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=92.56 E-value=0.29 Score=48.83 Aligned_cols=40 Identities=15% Similarity=0.305 Sum_probs=33.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
+....+++.++++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3345589999999999999999999999988877666553
No 147
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=92.47 E-value=0.55 Score=48.19 Aligned_cols=48 Identities=19% Similarity=0.223 Sum_probs=32.9
Q ss_pred CCeEEEEcCCccChhhhhhcCceE--Ee-cCCchHHHh-hhcceecccchhh
Q 001304 744 DYRTLAIGDGGNDVRMIQKADIGV--GI-SGREGLQAA-RAADYSIGKFRFL 791 (1104)
Q Consensus 744 ~~~v~~iGDG~ND~~ml~~AdvGI--am-~g~~~~~a~-~~AD~vl~~f~~l 791 (1104)
...++||||..+|+.+=+.|++.. ++ .|....... ..+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 467999999999999999999953 33 232221122 2489888775543
No 148
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=92.26 E-value=0.19 Score=50.68 Aligned_cols=26 Identities=38% Similarity=0.639 Sum_probs=23.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++-+++.++++.|+++|+++.++|..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 36799999999999999999999975
No 149
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.06 E-value=0.59 Score=61.58 Aligned_cols=135 Identities=11% Similarity=0.052 Sum_probs=83.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+|+.+.++.|+++|+++.++|+-....+..+.+..|+....-+ .++..+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~--------------------------- 212 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSAD--------------------------- 212 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECc---------------------------
Confidence 3679999999999999999999999999888888888887311000 011000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH--HHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK--~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am 769 (1104)
-+.+.-|+-. ..+.+.+.-..+.+++|||..+|+.+-+.|++-. ++
T Consensus 213 -------------------------------~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 213 -------------------------------AFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred -------------------------------ccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0001122111 1223333334567999999999999999999854 44
Q ss_pred c-CCchHHHh-hhcceecccchhhHHH-HHhhhhhhhhhh
Q 001304 770 S-GREGLQAA-RAADYSIGKFRFLKRL-ILVHGRYSYNRT 806 (1104)
Q Consensus 770 ~-g~~~~~a~-~~AD~vl~~f~~l~~l-ll~~GR~~~~~i 806 (1104)
. +....+.. ..+|+++.++..+... ++.-|-..+.|.
T Consensus 262 ~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~~ 301 (1057)
T PLN02919 262 TTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATPNV 301 (1057)
T ss_pred CCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCCCc
Confidence 2 22222222 3678999888776433 233344444443
No 150
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=91.69 E-value=0.27 Score=52.52 Aligned_cols=39 Identities=5% Similarity=0.077 Sum_probs=31.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
-++.++++++++.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 34678999999998 4999999999887777777777763
No 151
>PRK10444 UMP phosphatase; Provisional
Probab=91.35 E-value=3.5 Score=44.89 Aligned_cols=47 Identities=19% Similarity=0.268 Sum_probs=40.3
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH---cCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS---CNF 652 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~---~gi 652 (1104)
|.+--.+.+-+++.++|+.|+++|++++++||+...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 55556678899999999999999999999999999888777766 465
No 152
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=90.89 E-value=0.86 Score=48.51 Aligned_cols=40 Identities=13% Similarity=0.171 Sum_probs=32.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
+-++.+++.++++.|+++|+++.++|..+......+....
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 4568999999999999999999999998776655554443
No 153
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=90.20 E-value=1.1 Score=47.52 Aligned_cols=40 Identities=13% Similarity=0.259 Sum_probs=31.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhH---HHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---a~~ia~~~gi 652 (1104)
+.-+++.++++.+++.|++|+++|||.... +..--++.|+
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~ 162 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGF 162 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCC
Confidence 667899999999999999999999998755 3333445565
No 154
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=89.85 E-value=1.2 Score=45.12 Aligned_cols=27 Identities=19% Similarity=0.405 Sum_probs=23.7
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
+-+++.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
No 155
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=89.29 E-value=0.44 Score=50.45 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=25.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
++.+++.++++.|+++|+++.++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5689999999999999999999998654
No 156
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=88.89 E-value=2.6 Score=43.52 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCC-eEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI-~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
|+-|+..++|+.+++.|. .++++|--|......+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 578999999999999997 9999998888777777776665
No 157
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=88.80 E-value=1.2 Score=48.12 Aligned_cols=175 Identities=14% Similarity=0.110 Sum_probs=69.5
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCc---------HHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT---------EDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 682 (1104)
.+.+++.+++++|.+.. ..|+++||+..........--++.--..++..+...+.. ..+....+...++.
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEY 98 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHH
Confidence 45678889999998764 589999999998855543222221011111122222221 11111222222221
Q ss_pred ----ccccCCCCCceEEEEcch---------hHHHHHHHHHHHHHh---Hh-hhccceeeeccChhhHHHHHHHHHhc-C
Q 001304 683 ----MRITTSEPKDVAFVVDGW---------ALEIALKHYRKAFTE---LA-ILSRTAICCRVTPSQKAQLVELLKSC-D 744 (1104)
Q Consensus 683 ----~~~~~~~~~~~~lvi~g~---------~l~~~~~~~~~~f~~---l~-~~~~~~i~~r~sP~qK~~iV~~lk~~-~ 744 (1104)
..-..-+.+..++...-. ....+.+.+.+.... +. ...+..+=.|..-..|+..|+.+-+. +
T Consensus 99 ~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~ 178 (235)
T PF02358_consen 99 FAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRRLLEELP 178 (235)
T ss_dssp HHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHHHHTTS-
T ss_pred HHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHHHHHhcC
Confidence 111111234444444221 122222333332221 11 11223333333334699999977653 2
Q ss_pred ------CeEEEEcCCccChhhhhhc------CceEEecCCchHHHhhhcceeccc
Q 001304 745 ------YRTLAIGDGGNDVRMIQKA------DIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 745 ------~~v~~iGDG~ND~~ml~~A------dvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
..++++||...|-.|++.. ++||-+...+......+|+|-+.+
T Consensus 179 ~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 179 FAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred ccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3699999999999999874 456655222222222366766544
No 158
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=88.53 E-value=1.3 Score=50.55 Aligned_cols=26 Identities=31% Similarity=0.477 Sum_probs=24.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++.|++.++++.|+++|+++.++|+-
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECC
Confidence 57899999999999999999999983
No 159
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=88.41 E-value=0.99 Score=51.24 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~ 649 (1104)
++.++++++|+.|++.|+++.++|.-+...|..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568899999999999999999999999998888776
No 160
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=87.92 E-value=1.3 Score=48.07 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=37.3
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH--HHHHHcCCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI--QIALSCNFI 653 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~--~ia~~~gi~ 653 (1104)
|.+.-.+.+-|+++++++.|+++|+++.++|.-....+. ....+.|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555556778999999999999999999999986554333 456777774
No 161
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=87.86 E-value=3.1 Score=42.46 Aligned_cols=104 Identities=18% Similarity=0.326 Sum_probs=63.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.+++..|+++|.+++|+|-- .|+.... +.+...+.....+...
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgy-------f~~~~f~~~~~~m~~~-------------- 79 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGY-------FTEADFDKLHNKMLKI-------------- 79 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccC-------ccHHHHHHHHHHHHHH--------------
Confidence 5799999999999999999999953 3443221 1122222221112111
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--------hHHHHHHHHHhcC---CeEEEEcCCccChhhhhh
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--------QKAQLVELLKSCD---YRTLAIGDGGNDVRMIQK 762 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--------qK~~iV~~lk~~~---~~v~~iGDG~ND~~ml~~ 762 (1104)
|......-....+|--.|+ ..+.+.+.+++.+ ....+|||-..|..+-..
T Consensus 80 -------------------l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n 140 (181)
T COG0241 80 -------------------LASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN 140 (181)
T ss_pred -------------------HHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHH
Confidence 1111111123444444554 3566777777754 678999999999999888
Q ss_pred cCceEEe
Q 001304 763 ADIGVGI 769 (1104)
Q Consensus 763 AdvGIam 769 (1104)
|+++ +.
T Consensus 141 ~gi~-~~ 146 (181)
T COG0241 141 AGIK-GV 146 (181)
T ss_pred CCCC-ce
Confidence 8887 44
No 162
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=87.20 E-value=0.87 Score=47.72 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=26.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
++.+++.++++.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999876544
No 163
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=87.01 E-value=7 Score=42.62 Aligned_cols=156 Identities=15% Similarity=0.048 Sum_probs=86.9
Q ss_pred eecccCCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEE-EecCCc-----HH-------HHHH
Q 001304 609 AIEDRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL-SIDGKT-----ED-------EVCR 674 (1104)
Q Consensus 609 ~i~D~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~-~~~~~~-----~~-------~~~~ 674 (1104)
-....+-++..++++.|... ..-+||+||++.........--|+---..+|... ..+|.. .+ ++..
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~ 115 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAA 115 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHH
Confidence 34456778889999999877 5589999999999887766533331111112122 334432 11 2233
Q ss_pred HHHHHHHHccccCCCCCceEEEEcchhHHH------HHHH--HHHHHHhHh-hhccceeeeccChhhHHHHHHHHHh-c-
Q 001304 675 SLERVLLTMRITTSEPKDVAFVVDGWALEI------ALKH--YRKAFTELA-ILSRTAICCRVTPSQKAQLVELLKS-C- 743 (1104)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~------~~~~--~~~~f~~l~-~~~~~~i~~r~sP~qK~~iV~~lk~-~- 743 (1104)
.++.......-+.-+.+..++...-...+. .+.. ......++. ...+.+|-+|-+-..|+.+++.+.+ .
T Consensus 116 ~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~ 195 (266)
T COG1877 116 ILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELP 195 (266)
T ss_pred HHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCC
Confidence 333333333322223444454442211110 0000 000001011 1235667777777789999996654 3
Q ss_pred --CCeEEEEcCCccChhhhhhcC
Q 001304 744 --DYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 744 --~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
+..+++.||-..|-.|++..+
T Consensus 196 ~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 196 FDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCCcceecCCCCccHHHHHhhc
Confidence 345899999999999999988
No 164
>PHA02597 30.2 hypothetical protein; Provisional
Probab=86.23 E-value=2.5 Score=44.05 Aligned_cols=23 Identities=13% Similarity=0.148 Sum_probs=20.6
Q ss_pred CeEEEEcCCccChhhhhhc--CceE
Q 001304 745 YRTLAIGDGGNDVRMIQKA--DIGV 767 (1104)
Q Consensus 745 ~~v~~iGDG~ND~~ml~~A--dvGI 767 (1104)
+.+++|||..+|+.+-++| ++-.
T Consensus 146 ~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 146 RVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred CcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 4588999999999999999 9866
No 165
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=85.27 E-value=2.3 Score=42.09 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=36.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
+.-|++++=+.+++++|+++.++|.-+...+..++..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 4567888889999999999999999999999999999887
No 166
>PLN02645 phosphoglycolate phosphatase
Probab=85.01 E-value=2.8 Score=47.34 Aligned_cols=47 Identities=32% Similarity=0.489 Sum_probs=38.9
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHH---HHcCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNF 652 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia---~~~gi 652 (1104)
|.+--.+.+-++++++|+.|++.|++++++|++...+...++ .++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555556777899999999999999999999999977776666 45665
No 167
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=82.59 E-value=4.6 Score=40.78 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=35.4
Q ss_pred cccCCCChHHHHHHHHHcCC--eEEEEcCC-------CHhHHHHHHHHcCC
Q 001304 611 EDRLQDGVPETIETLRKAGI--NFWMLTGD-------KQNTAIQIALSCNF 652 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI--~v~mlTGD-------~~~ta~~ia~~~gi 652 (1104)
++++.++..+.+++|++.+. +|+++|.- +...|..+++.+|+
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 56788999999999999987 49999986 37778888888886
No 168
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=81.81 E-value=10 Score=45.58 Aligned_cols=71 Identities=18% Similarity=0.199 Sum_probs=48.2
Q ss_pred ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHHHHhhhhhhhhhhh
Q 001304 729 TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTA 807 (1104)
Q Consensus 729 sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~~~~~i~ 807 (1104)
.-++|..-++..........+.||+.||.|||+.||.+..+ +.. + -=.+..+++.+.+++-.||..+.=.-
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V-~~~-----~--~~~~~~~~~~~~~~fhdgrl~~~p~~ 243 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMV-PRT-----K--CEPLPRNKLLSPVIFHEGRLVQRPTP 243 (497)
T ss_pred ccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEe-CCC-----C--CCcCCcccCCCceeeeCCcccCCCCH
Confidence 34567766663322112237999999999999999999998 331 1 11155667888888778998887543
No 169
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=80.57 E-value=3.7 Score=42.30 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=30.2
Q ss_pred hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 618 ~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
..++++.|++. +++.++||.....+..+.+..|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 46899999875 899999999999999888888873
No 170
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=80.16 E-value=10 Score=45.57 Aligned_cols=168 Identities=13% Similarity=0.100 Sum_probs=119.4
Q ss_pred ceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Q 001304 20 NRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKAN 99 (1104)
Q Consensus 20 N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~~~~n 99 (1104)
+..+-..||+..+++.-.|.+|.+..++++.+..++..+....+...+..|.+++++.++.-..+-++.++|.+.++...
T Consensus 85 ~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~ 164 (1051)
T KOG0210|consen 85 RNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEK 164 (1051)
T ss_pred hhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 33445678888899999999999999999999999988877777777888999999999998889999999977554332
Q ss_pred ceE----------EEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEE------E-EeccCCCCCCc
Q 001304 100 EKE----------VWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCY------V-ETAALDGETDL 162 (1104)
Q Consensus 100 ~~~----------~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~------V-des~LtGEs~~ 162 (1104)
-.+ ..-+.-|..+.+.-.+=+|-|.|.|+.-|.- --..+.++..+|+.- | -+..++-+++.
T Consensus 165 y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~s--g~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el 242 (1051)
T KOG0210|consen 165 YTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKS--GSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSEL 242 (1051)
T ss_pred heeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCC--CceEEeccccCCcccceeeccchhhccCCcccch
Confidence 211 2224457778888889999999999976643 335666666566421 1 15566666555
Q ss_pred eEeeccccccCCCHhhhccceeEEEecCCC
Q 001304 163 KTRLIPAACMGMDFELLHKIKGVIECPGPD 192 (1104)
Q Consensus 163 ~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~ 192 (1104)
-.-. -..+.+.++++++-|++.....+
T Consensus 243 ~~i~---v~Ae~P~kdIh~F~Gt~~~~d~~ 269 (1051)
T KOG0210|consen 243 MEIS---VYAEKPQKDIHSFVGTFTITDSD 269 (1051)
T ss_pred heEE---EeccCcchhhHhhEEEEEEecCC
Confidence 4332 12334556788888887765544
No 171
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=79.73 E-value=18 Score=39.65 Aligned_cols=45 Identities=22% Similarity=0.265 Sum_probs=38.4
Q ss_pred EEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH
Q 001304 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649 (1104)
Q Consensus 605 lG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~ 649 (1104)
=|.+.--+++=|++.++|+.|+++|++++.+|.-...+...++.+
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 377778888999999999999999999999999888777744443
No 172
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=76.80 E-value=1.7 Score=40.01 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=35.0
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHH---HHcCCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNFI 653 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia---~~~gi~ 653 (1104)
|++--.+++=|++.++|+.|+++|++++++|.....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 344456778899999999999999999999988766544444 567764
No 173
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=75.75 E-value=4 Score=44.80 Aligned_cols=41 Identities=7% Similarity=0.193 Sum_probs=37.9
Q ss_pred CC-CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 614 LQ-DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 614 lr-~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
+| |++.+++++|+++|+++.++|+.....+...-.++|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 55 999999999999999999999999999999999999964
No 174
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=74.77 E-value=5.3 Score=41.11 Aligned_cols=38 Identities=8% Similarity=-0.030 Sum_probs=32.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+++.++++.|+ .+++++|+-+...+..+....|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 36789999999997 479999999888888888888873
No 175
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=74.03 E-value=4.8 Score=44.08 Aligned_cols=48 Identities=23% Similarity=0.336 Sum_probs=37.3
Q ss_pred EEEeeccc----CCCChHHHHHHHHHcCCeEEEEcCCCHhH---HHHHHHHcCCC
Q 001304 606 GVTAIEDR----LQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (1104)
Q Consensus 606 G~i~i~D~----lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---a~~ia~~~gi~ 653 (1104)
|.+.-.+. +-+++.++|+.|+++|++++++||++..+ ......++|+-
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 44444455 78899999999999999999999987765 44555667763
No 176
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=70.80 E-value=6.6 Score=42.13 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=26.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHh
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ 641 (1104)
++.-|++.+.++.+++.|++|..+|||+..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 355688999999999999999999999754
No 177
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=70.35 E-value=38 Score=33.80 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=30.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAI 644 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~ 644 (1104)
|..++++.+..+.+++.|.+++-+|++..--|.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~ 58 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQAN 58 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHH
Confidence 789999999999999999999999999876553
No 178
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=70.19 E-value=6.7 Score=43.14 Aligned_cols=41 Identities=7% Similarity=0.168 Sum_probs=36.7
Q ss_pred CC-CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 614 LQ-DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 614 lr-~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
+| |++.+++++|+++|+++.++|+.....+.......|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 34 889999999999999999999888888899999999953
No 179
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=69.33 E-value=14 Score=39.40 Aligned_cols=44 Identities=18% Similarity=0.243 Sum_probs=39.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~ 655 (1104)
.++.+|+.+.++.|++.|+.+.+.|+-....+..+....|+...
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~ 128 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY 128 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh
Confidence 46889999999999999999999999999999999999998543
No 180
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=67.75 E-value=4.7 Score=38.65 Aligned_cols=33 Identities=12% Similarity=0.042 Sum_probs=28.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAI 644 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~ 644 (1104)
+++.+++.++++.++++|++++++|||......
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 567889999999999999999999999887544
No 181
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=67.00 E-value=1.2e+02 Score=39.03 Aligned_cols=151 Identities=12% Similarity=0.018 Sum_probs=77.0
Q ss_pred CCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-ecC-------Cc-HHH----HHHHHHHH
Q 001304 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDG-------KT-EDE----VCRSLERV 679 (1104)
Q Consensus 614 lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-~~~-------~~-~~~----~~~~~~~~ 679 (1104)
+.+++.++++.|.+. +..|+++||+...+.......+++.--..+|.... .++ .. ..+ +...++..
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~aeHG~~~r~~~~~w~~~~~~~~~~~w~~~v~~~l~~~ 612 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAENGMFLRHTSGEWVTTMPEHMNLDWVDGVKNVFKYF 612 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEeCCEEEecCCCceeeccccccChhHHHHHHHHHHHH
Confidence 456778888888765 78999999999998887765444311111111111 011 00 011 22222333
Q ss_pred HHHccccCCCCCceEEEEcchhH--H---HHHHHHHHHHHh-H-h----hhccceeeeccChh--hHHHHHHHHHhc---
Q 001304 680 LLTMRITTSEPKDVAFVVDGWAL--E---IALKHYRKAFTE-L-A----ILSRTAICCRVTPS--QKAQLVELLKSC--- 743 (1104)
Q Consensus 680 ~~~~~~~~~~~~~~~lvi~g~~l--~---~~~~~~~~~f~~-l-~----~~~~~~i~~r~sP~--qK~~iV~~lk~~--- 743 (1104)
.+...-+.-+.+..+++..-..- + ....++.+++.. . . .+....-..++.|. +|+..|+.+.+.
T Consensus 613 ~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ll~~~~~ 692 (797)
T PLN03063 613 TDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGRILGEIVH 692 (797)
T ss_pred HHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHHHHHHhhh
Confidence 22222233345566666433211 1 111222222211 1 0 01112223455555 799999877641
Q ss_pred -------CCeEEEEcCCc-cChhhhhhcC
Q 001304 744 -------DYRTLAIGDGG-NDVRMIQKAD 764 (1104)
Q Consensus 744 -------~~~v~~iGDG~-ND~~ml~~Ad 764 (1104)
..-|+++||.. -|=.|++.-+
T Consensus 693 ~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~ 721 (797)
T PLN03063 693 NKSMTTPIDFVFCSGYFLEKDEDVYTFFE 721 (797)
T ss_pred ccccCCCCCEEEEeCCCCCCcHHHHHhcc
Confidence 24699999975 4999988543
No 182
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=66.47 E-value=21 Score=38.95 Aligned_cols=30 Identities=13% Similarity=0.199 Sum_probs=26.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHh
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQN 641 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ 641 (1104)
.|.-+++.+..+.+++.|++|+++|||...
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~ 173 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKD 173 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 456679999999999999999999999854
No 183
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=63.23 E-value=5.2 Score=40.39 Aligned_cols=42 Identities=14% Similarity=0.013 Sum_probs=36.9
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 610 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
+.=..||++.+.++.|.+. ..+.+.|......|..+...++.
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 3335899999999999987 99999999999999999988775
No 184
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=62.92 E-value=22 Score=42.95 Aligned_cols=27 Identities=19% Similarity=0.437 Sum_probs=24.0
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
+-++++++|+.|+++|++++++|.-..
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 469999999999999999999997544
No 185
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=61.89 E-value=16 Score=39.41 Aligned_cols=28 Identities=14% Similarity=0.241 Sum_probs=22.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHh
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQN 641 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ 641 (1104)
++-++++++++.|++. +++.++|.-+..
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~ 140 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ 140 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch
Confidence 4678999999999975 899999886543
No 186
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=58.94 E-value=61 Score=42.47 Aligned_cols=98 Identities=22% Similarity=0.360 Sum_probs=63.7
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhccccccCCcchhhHH----HHHHHHHHHHHHHHHHHHhhhhHhhcceEEEEEECC
Q 001304 35 KNLWEQFSR-FMNQYFLLIACLQLWSLITPVNPASTWGPL----IFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG 109 (1104)
Q Consensus 35 ~~l~~qf~~-~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l----~~i~~i~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g 109 (1104)
..+|..|.+ +.+.+..++.+...++. ....|.+. .++..+-.+...+.-.+.+++.+.++.-+-..
T Consensus 68 ~~~~~~fl~~f~~~~~~iL~~~a~~s~-----~~~~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~---- 138 (917)
T COG0474 68 RSLLKKFLRQFKDPFIILLLVAALLSA-----FVGDWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMS---- 138 (917)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-----HhhcccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc----
Confidence 355555554 55555555555555433 12233322 36777778888888888888888877654433
Q ss_pred eEEEEeccCCccceEEEEecCCcccceEEEEeccC
Q 001304 110 IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSD 144 (1104)
Q Consensus 110 ~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~ 144 (1104)
...+.=++-|..+.+...|.+|-|.+.|++.|
T Consensus 139 ---~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd 170 (917)
T COG0474 139 ---SPKAKVLRDGKFVEIPASELVPGDIVLLEAGD 170 (917)
T ss_pred ---cCceEEEeCCcEEEecHHHCCCCcEEEECCCC
Confidence 22233344899999999999999999997654
No 187
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=57.48 E-value=1.5e+02 Score=38.68 Aligned_cols=153 Identities=12% Similarity=0.059 Sum_probs=77.2
Q ss_pred CCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCc---------HHHHHHHHHHHHHH-
Q 001304 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT---------EDEVCRSLERVLLT- 682 (1104)
Q Consensus 614 lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~- 682 (1104)
+-+++.++++.|.+. +..|+++||+...+.......+++.--..+|..+...+.. ..+-...+...++.
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~L~LaAEHG~~~R~~~~~w~~~~~~~~~~~W~~~v~~ile~~ 702 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFDMWLAAENGMFLRHTKGEWMTTMPEHLNMDWVDSVKHVFEYF 702 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCCceEEeeCCeEEecCCCcceeccccccchHHHHHHHHHHHHH
Confidence 346678888888765 6789999999999988777655432111111111111100 01111112222222
Q ss_pred ---ccccCCCCCceEEEEcchh----HHHH-HHHHHHHHHh-Hh-----hhccceeeeccChh--hHHHHHHHHHhc---
Q 001304 683 ---MRITTSEPKDVAFVVDGWA----LEIA-LKHYRKAFTE-LA-----ILSRTAICCRVTPS--QKAQLVELLKSC--- 743 (1104)
Q Consensus 683 ---~~~~~~~~~~~~lvi~g~~----l~~~-~~~~~~~f~~-l~-----~~~~~~i~~r~sP~--qK~~iV~~lk~~--- 743 (1104)
..-+.-+.+..+++..-.. +... ..++.+++.. .. .+....-..++.|. +|+..|+.+-..
T Consensus 703 ~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~ 782 (934)
T PLN03064 703 TERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGAAIDRILGEIVH 782 (934)
T ss_pred HhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHHHHHHHHHhhhh
Confidence 2222234555666543321 1111 1222233211 10 01111122344454 899999877652
Q ss_pred -------CCeEEEEcCCcc-ChhhhhhcCce
Q 001304 744 -------DYRTLAIGDGGN-DVRMIQKADIG 766 (1104)
Q Consensus 744 -------~~~v~~iGDG~N-D~~ml~~AdvG 766 (1104)
-.-|+++||-.. |-.|++.-.-.
T Consensus 783 ~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~ 813 (934)
T PLN03064 783 SKSMTTPIDYVLCIGHFLGKDEDIYTFFEPE 813 (934)
T ss_pred ccccCCCCCEEEEeCCCCCCcHHHHHHHhcc
Confidence 245999999653 99999876543
No 188
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=56.80 E-value=47 Score=35.21 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=33.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++-+++.++++.+++. .+++++|--....+.....++||.
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~ 138 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLL 138 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCCh
Confidence 4678888899998888 899999987777788888888863
No 189
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=55.02 E-value=1.2e+02 Score=39.76 Aligned_cols=47 Identities=19% Similarity=0.272 Sum_probs=36.2
Q ss_pred eeccChh--hHHHHHHHHHhc-----CCeEEEEcCCcc-C-hhhhhhcCceEEecC
Q 001304 725 CCRVTPS--QKAQLVELLKSC-----DYRTLAIGDGGN-D-VRMIQKADIGVGISG 771 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~~-----~~~v~~iGDG~N-D-~~ml~~AdvGIam~g 771 (1104)
+.++.|. .|++.++.|... .+++.++||..| | ..|+.--+-+|-+.|
T Consensus 947 ~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 947 RLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred EeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEec
Confidence 4567786 799999998763 345577999999 9 558788888997755
No 190
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=54.08 E-value=24 Score=35.68 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=25.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++ ++.++|.-+........+..|+
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l 122 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGL 122 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCC
Confidence 47899999998 3678888777777777777776
No 191
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=52.12 E-value=28 Score=35.87 Aligned_cols=51 Identities=22% Similarity=0.335 Sum_probs=43.3
Q ss_pred cEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHH---HcCC
Q 001304 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL---SCNF 652 (1104)
Q Consensus 602 l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~---~~gi 652 (1104)
+.+-|.+-+||..-|++.|+++.|++++.+|..+|.-..++-..+.. .||+
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 45679999999999999999999999999999999888777666654 4555
No 192
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=51.91 E-value=26 Score=29.97 Aligned_cols=47 Identities=19% Similarity=0.344 Sum_probs=33.0
Q ss_pred cCCeEEEEcCC-ccChhhhhhcCceEEe--cCCchH-HHh---hhcceecccch
Q 001304 743 CDYRTLAIGDG-GNDVRMIQKADIGVGI--SGREGL-QAA---RAADYSIGKFR 789 (1104)
Q Consensus 743 ~~~~v~~iGDG-~ND~~ml~~AdvGIam--~g~~~~-~a~---~~AD~vl~~f~ 789 (1104)
....++||||. ..|+.+=+.+++--.. +|.... +.. ..+|+++.+..
T Consensus 20 ~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 20 DPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp GGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred CHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 34679999999 9999999999986532 333222 222 37899887754
No 193
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=49.48 E-value=32 Score=37.65 Aligned_cols=53 Identities=19% Similarity=0.206 Sum_probs=34.2
Q ss_pred cCCeEEEEcCCc-cChhhhhhcCceE-Ee-cCCc-hHH--H-hhhcceecccchhhHHHH
Q 001304 743 CDYRTLAIGDGG-NDVRMIQKADIGV-GI-SGRE-GLQ--A-ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 743 ~~~~v~~iGDG~-ND~~ml~~AdvGI-am-~g~~-~~~--a-~~~AD~vl~~f~~l~~ll 795 (1104)
..+.++||||.. +|+.+=+.+++-. .+ +|.. ..+ . ...+|+++.++..+..++
T Consensus 195 ~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~l 254 (257)
T TIGR01458 195 EPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDLI 254 (257)
T ss_pred ChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHHH
Confidence 457899999996 8999999888755 33 2321 111 1 225788887766555443
No 194
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=49.32 E-value=1e+02 Score=40.32 Aligned_cols=109 Identities=19% Similarity=0.227 Sum_probs=67.2
Q ss_pred HHHHHHHHH-H-HHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhhHhhcceEEEEEECCeEE
Q 001304 35 KNLWEQFSR-F-MNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKK 112 (1104)
Q Consensus 35 ~~l~~qf~~-~-~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~~~ 112 (1104)
+.+|..|.+ + .+.+.+++.+...+.. ....|...++++++..+...+.-++.+++.+.+..-.- +...+
T Consensus 48 ~s~~~~~l~~~~~~~~~~~L~~aa~ls~-----~~g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~--l~~~~-- 118 (884)
T TIGR01522 48 ESLWKKFLSQFVKNPLILLLIASAVISV-----FMGNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNK--LVPPE-- 118 (884)
T ss_pred CCHHHHHHHHHhhChHHHHHHHHHHHHH-----HHcchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCe--
Confidence 467776655 4 3655555555544321 23345556667777788888888888888877765321 11111
Q ss_pred EEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCC
Q 001304 113 LIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDG 158 (1104)
Q Consensus 113 ~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtG 158 (1104)
+.=++-|....+...|.+|-|.+++...+ .+-+|=-.+.|
T Consensus 119 ---~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd---~IPaDg~ii~g 158 (884)
T TIGR01522 119 ---CHLIREGKLEHVLASTLVPGDLVCLSVGD---RVPADLRIVEA 158 (884)
T ss_pred ---eEEEECCEEEEEEHHHCccCCEEEecCCC---EEeeeEEEEEc
Confidence 11234588889999999999999997543 24444444444
No 195
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=45.04 E-value=23 Score=39.27 Aligned_cols=48 Identities=23% Similarity=0.355 Sum_probs=35.3
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH---HHHHHcCCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI---QIALSCNFI 653 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~---~ia~~~gi~ 653 (1104)
|.+.-.+.+-+++.++|+.|+++|++++++||+...+.. .-.+++|+.
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 333445667788999999999999999999997644333 334567764
No 196
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=43.64 E-value=1.6e+02 Score=28.57 Aligned_cols=80 Identities=11% Similarity=0.172 Sum_probs=55.2
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHc
Q 001304 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (1104)
Q Consensus 549 ~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~a 628 (1104)
-+...|++|+-++...- .+++-+ .-.|.+-.++|+-++--.--+..+++++.|+++
T Consensus 24 ~l~~~GfeVi~LG~~v~-~e~~v~-----------------------aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~ 79 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSP-QEEFIK-----------------------AAIETKADAILVSSLYGHGEIDCKGLRQKCDEA 79 (134)
T ss_pred HHHHCCCEEEECCCCCC-HHHHHH-----------------------HHHHcCCCEEEEecccccCHHHHHHHHHHHHHC
Confidence 34678999999885443 222211 234568889999988877777889999999999
Q ss_pred CC--eEEEEcCCCH---h---HHHHHHHHcCC
Q 001304 629 GI--NFWMLTGDKQ---N---TAIQIALSCNF 652 (1104)
Q Consensus 629 GI--~v~mlTGD~~---~---ta~~ia~~~gi 652 (1104)
|. .+|++-|-.. + ....-++++|+
T Consensus 80 gl~~~~vivGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 80 GLEGILLYVGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred CCCCCEEEecCCcCcChhhhHHHHHHHHHcCC
Confidence 97 5677877521 1 12345788885
No 197
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=42.18 E-value=41 Score=33.73 Aligned_cols=38 Identities=13% Similarity=0.289 Sum_probs=27.8
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCCHh----HHHHHHHHcCC
Q 001304 615 QDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNF 652 (1104)
Q Consensus 615 r~~~~~~I~~l~~aGI~v~mlTGD~~~----ta~~ia~~~gi 652 (1104)
++-+++.|..=++.|-++..+||+..- ++...|+...|
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i 157 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHI 157 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhccc
Confidence 445677888888999999999999764 33455555555
No 198
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=40.97 E-value=67 Score=42.31 Aligned_cols=62 Identities=13% Similarity=0.136 Sum_probs=38.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHH-----Hhh-h--hHhh-cceEEEE----EECCeEEEEeccCCccceEEEEec
Q 001304 68 STWGPLIFIFAVSATKEAWDDYN-----RYL-S--DKKA-NEKEVWV----VKQGIKKLIQSQDIRVGNIVWLRE 129 (1104)
Q Consensus 68 ~~~~~l~~i~~i~~~~~~~~d~~-----~~~-~--~~~~-n~~~~~V----~r~g~~~~i~~~~lvvGDIV~l~~ 129 (1104)
..+++++++++++++.++.++++ +.. . -+.+ +.+...+ +.-|....+...|.+|.|.+.++.
T Consensus 133 ~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g 207 (941)
T TIGR01517 133 AILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISG 207 (941)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEc
Confidence 34566677777888877777652 211 1 1111 2223333 456888888999999999988864
No 199
>PTZ00445 p36-lilke protein; Provisional
Probab=39.27 E-value=42 Score=35.11 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=24.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
++|+.++-++.|+++||+|.++|=-...+
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 68889999999999999999999655543
No 200
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=38.68 E-value=2.7e+02 Score=27.15 Aligned_cols=81 Identities=14% Similarity=0.208 Sum_probs=56.3
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
.-+...|++|+.++... +.+++.+ .-.+.+-.++|+....-...+.+++.++.|++
T Consensus 25 ~~lr~~G~eVi~LG~~v-p~e~i~~-----------------------~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~ 80 (137)
T PRK02261 25 RALTEAGFEVINLGVMT-SQEEFID-----------------------AAIETDADAILVSSLYGHGEIDCRGLREKCIE 80 (137)
T ss_pred HHHHHCCCEEEECCCCC-CHHHHHH-----------------------HHHHcCCCEEEEcCccccCHHHHHHHHHHHHh
Confidence 34567899999998543 3333211 22346788999998888888999999999999
Q ss_pred cCC-e-EEEEcCCC------HhHHHHHHHHcCC
Q 001304 628 AGI-N-FWMLTGDK------QNTAIQIALSCNF 652 (1104)
Q Consensus 628 aGI-~-v~mlTGD~------~~ta~~ia~~~gi 652 (1104)
.|. . .+++-|-- ......-++++|+
T Consensus 81 ~~~~~~~i~vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 81 AGLGDILLYVGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred cCCCCCeEEEECCCCCCccChHHHHHHHHHcCC
Confidence 965 2 45666653 3444567888885
No 201
>PRK11507 ribosome-associated protein; Provisional
Probab=36.91 E-value=36 Score=28.86 Aligned_cols=26 Identities=19% Similarity=0.114 Sum_probs=22.5
Q ss_pred EEEECCeEEEEeccCCccceEEEEec
Q 001304 104 WVVKQGIKKLIQSQDIRVGNIVWLRE 129 (1104)
Q Consensus 104 ~V~r~g~~~~i~~~~lvvGDIV~l~~ 129 (1104)
.|..||+...-.-+.|++||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 46779999999999999999998854
No 202
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=36.75 E-value=3e+02 Score=30.77 Aligned_cols=177 Identities=17% Similarity=0.167 Sum_probs=89.7
Q ss_pred cccCCCChHHHHHHHHHcCCeE---EEEcCCCHhHH------HHHHHHcCCCCCCCCCeEEEecCC-cHHHHHHHHHHHH
Q 001304 611 EDRLQDGVPETIETLRKAGINF---WMLTGDKQNTA------IQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVL 680 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v---~mlTGD~~~ta------~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 680 (1104)
.++++++.++.++.+++.|++. .++-||++... ...|.++|+... .+.+... +.+++...+++.-
T Consensus 13 A~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~-----~~~l~~~~t~~~l~~~I~~lN 87 (301)
T PRK14194 13 AARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSL-----EHRLPADTSQARLLALIAELN 87 (301)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE-----EEECCCCCCHHHHHHHHHHHc
Confidence 3456778888999998888764 56678887655 346677887432 3344333 4445554444432
Q ss_pred HHccccCCCCCceEEEE-----cchhHHHHHHH---H-------HHHHHhHhhhccceeeeccChhhHHHHHHHHHh--c
Q 001304 681 LTMRITTSEPKDVAFVV-----DGWALEIALKH---Y-------RKAFTELAILSRTAICCRVTPSQKAQLVELLKS--C 743 (1104)
Q Consensus 681 ~~~~~~~~~~~~~~lvi-----~g~~l~~~~~~---~-------~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~--~ 743 (1104)
+.-. . ..+++ .+-.-..+++. . ...+..+.. ...-+.=+||.-=.++++...- .
T Consensus 88 ~D~~-----V--~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~--~~~~~~PcTp~aii~lL~~~~i~l~ 158 (301)
T PRK14194 88 ADPS-----V--NGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQ--GRDVLTPCTPSGCLRLLEDTCGDLT 158 (301)
T ss_pred CCCC-----C--CeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhc--CCCCCCCCcHHHHHHHHHHhCCCCC
Confidence 1110 0 01111 01111111110 0 011111111 1122334555554444444332 4
Q ss_pred CCeEEEEcCC-ccC---hhhhhhcCceEEecC---CchHHHhhhcceecc---cchhhHHHHHhhhhh
Q 001304 744 DYRTLAIGDG-GND---VRMIQKADIGVGISG---REGLQAARAADYSIG---KFRFLKRLILVHGRY 801 (1104)
Q Consensus 744 ~~~v~~iGDG-~ND---~~ml~~AdvGIam~g---~~~~~a~~~AD~vl~---~f~~l~~lll~~GR~ 801 (1104)
|+.++++|-| .-= +.+|..++..+.+.. .+-.++.+.||+++. +..++....+..|..
T Consensus 159 Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsavg~~~~v~~~~ik~Gai 226 (301)
T PRK14194 159 GKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAAVGRPRLIDADWLKPGAV 226 (301)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEecCChhcccHhhccCCcE
Confidence 8899999997 333 346777888776532 223445678999985 444444444455543
No 203
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=36.73 E-value=3.2e+02 Score=35.05 Aligned_cols=96 Identities=11% Similarity=0.166 Sum_probs=61.6
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhhHhhcceEEEEEECCeEEEE
Q 001304 36 NLWEQ-FSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLI 114 (1104)
Q Consensus 36 ~l~~q-f~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i 114 (1104)
..|.. ++.+.+.+.+++.+...+.. ....|...++++++..+...+.-++.+++.+.+..-+-.. . ....+
T Consensus 25 ~~~~~~~~~~~~~~~~lL~~aa~~s~-----~~~~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~--~-~~~~V 96 (755)
T TIGR01647 25 SPLLKFLGFFWNPLSWVMEAAAIIAI-----ALENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSL--A-PKARV 96 (755)
T ss_pred CHHHHHHHHHhchHHHHHHHHHHHHH-----hhcchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhC--C-CeEEE
Confidence 34443 44566666555555444321 3335566777777888888889888888888886532111 1 11121
Q ss_pred eccCCccceEEEEecCCcccceEEEEecc
Q 001304 115 QSQDIRVGNIVWLRENDEVPCDLVLIGTS 143 (1104)
Q Consensus 115 ~~~~lvvGDIV~l~~g~~vPaD~~ll~ss 143 (1104)
++-|....+...|.+|-|.+++...
T Consensus 97 ----~Rdg~~~~I~~~~Lv~GDiV~l~~G 121 (755)
T TIGR01647 97 ----LRDGKWQEIPASELVPGDVVRLKIG 121 (755)
T ss_pred ----EECCEEEEEEhhhCcCCCEEEECCC
Confidence 2448889999999999999999643
No 204
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=36.62 E-value=14 Score=38.77 Aligned_cols=67 Identities=24% Similarity=0.354 Sum_probs=45.0
Q ss_pred HHHHHHHhHh--hhccceeeeccChh--hHHHHHHHHHhc-CCeEEEEcC----CccChhhhhhcC-ceEEecCCch
Q 001304 708 HYRKAFTELA--ILSRTAICCRVTPS--QKAQLVELLKSC-DYRTLAIGD----GGNDVRMIQKAD-IGVGISGREG 774 (1104)
Q Consensus 708 ~~~~~f~~l~--~~~~~~i~~r~sP~--qK~~iV~~lk~~-~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~ 774 (1104)
.+++.|.++. ...-..+-.+++|. +|...++.|.+. -+.+.++|| |.||-|.+..+. +|+++++.+.
T Consensus 134 ~L~~~f~d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~D 210 (220)
T PF03332_consen 134 ALKKEFPDFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPED 210 (220)
T ss_dssp HHHHHTCCCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHHH
T ss_pred HHHHHCCCCceEEecCCceEEccccCCccHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEeCCHHH
Confidence 3445554422 22233455688888 799988888763 467899999 899999998765 4888855443
No 205
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=36.42 E-value=84 Score=29.85 Aligned_cols=81 Identities=19% Similarity=0.299 Sum_probs=57.2
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
.-+...|++|+.++.. .+.++..+ .-.+.+-.++++-+......+.+++.++.|++
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e~~~~-----------------------~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~ 76 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPEEIVE-----------------------AAIQEDVDVIGLSSLSGGHMTLFPEVIELLRE 76 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcccchhhHHHHHHHHHHHHh
Confidence 3467889999998854 33333211 12246777888888888888899999999999
Q ss_pred cCC-e-EEEEcCCCHhHHHHHHHHcCC
Q 001304 628 AGI-N-FWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 628 aGI-~-v~mlTGD~~~ta~~ia~~~gi 652 (1104)
+|. + .+++-|..+..-..-.++.|+
T Consensus 77 ~~~~~i~i~~GG~~~~~~~~~~~~~G~ 103 (122)
T cd02071 77 LGAGDILVVGGGIIPPEDYELLKEMGV 103 (122)
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHCCC
Confidence 977 3 456666666545666778886
No 206
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=36.14 E-value=3.7e+02 Score=29.60 Aligned_cols=40 Identities=18% Similarity=0.300 Sum_probs=29.6
Q ss_pred cChHHhhhhhhccC---------CchhHHHHHHHHHHhccceEEEEEEE
Q 001304 524 KGADEAILPYAHAG---------QQTRTFVEAVEQYSQLGLRTLCLAWR 563 (1104)
Q Consensus 524 KGa~e~i~~~~~~~---------~~~~~~~~~~~~~a~~GlR~l~~A~k 563 (1104)
-|.+..+.+.+... ....+..+.+++++++|+.++.++.+
T Consensus 75 HGVs~~v~~~a~~r~l~v~DATCPlVtKvh~~v~~~~~~G~~iIliG~~ 123 (294)
T COG0761 75 HGVSPAVREEAKERGLKVIDATCPLVTKVHKEVERYAREGYEIILIGHK 123 (294)
T ss_pred CCCCHHHHHHHHHCCCEEEecCCCcchHHHHHHHHHHhCCCEEEEEccC
Confidence 47666666655432 12367889999999999999999954
No 207
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=35.75 E-value=19 Score=30.00 Aligned_cols=26 Identities=19% Similarity=0.381 Sum_probs=14.5
Q ss_pred EEECCeEEEEeccCCccceEEEEecCC
Q 001304 105 VVKQGIKKLIQSQDIRVGNIVWLREND 131 (1104)
Q Consensus 105 V~r~g~~~~i~~~~lvvGDIV~l~~g~ 131 (1104)
|..||+...-.-+.|.+||+|.+ .|+
T Consensus 35 V~VNGe~e~rrg~Kl~~GD~V~~-~~~ 60 (65)
T PF13275_consen 35 VKVNGEVETRRGKKLRPGDVVEI-DGE 60 (65)
T ss_dssp HEETTB----SS----SSEEEEE-TTE
T ss_pred eEECCEEccccCCcCCCCCEEEE-CCE
Confidence 56789888889999999999998 443
No 208
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=35.57 E-value=1e+02 Score=29.00 Aligned_cols=81 Identities=19% Similarity=0.265 Sum_probs=57.3
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
.-+...|++|+.++. .++.++..+. -.+.+-.++|+....++--+.+++.++.+++
T Consensus 21 ~~l~~~G~~V~~lg~-~~~~~~l~~~-----------------------~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~ 76 (119)
T cd02067 21 RALRDAGFEVIDLGV-DVPPEEIVEA-----------------------AKEEDADAIGLSGLLTTHMTLMKEVIEELKE 76 (119)
T ss_pred HHHHHCCCEEEECCC-CCCHHHHHHH-----------------------HHHcCCCEEEEeccccccHHHHHHHHHHHHH
Confidence 345579999988773 3555443221 2346778899988877777999999999999
Q ss_pred cCC-e-EEEEcCCCHhHHHHHHHHcCC
Q 001304 628 AGI-N-FWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 628 aGI-~-v~mlTGD~~~ta~~ia~~~gi 652 (1104)
.+- + .+++-|-....-...+++.|.
T Consensus 77 ~~~~~~~i~vGG~~~~~~~~~~~~~G~ 103 (119)
T cd02067 77 AGLDDIPVLVGGAIVTRDFKFLKEIGV 103 (119)
T ss_pred cCCCCCeEEEECCCCChhHHHHHHcCC
Confidence 986 4 467777665543567788886
No 209
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=32.48 E-value=71 Score=32.43 Aligned_cols=41 Identities=20% Similarity=0.302 Sum_probs=31.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEc-CCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLT-GDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlT-GD~~~ta~~ia~~~gi~ 653 (1104)
.+-+++++.++.|++.|+++.++| -+.+.-|..+-+.+++.
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 467999999999999999999999 58899999999999986
No 210
>PRK08508 biotin synthase; Provisional
Probab=32.34 E-value=5.5e+02 Score=28.32 Aligned_cols=116 Identities=16% Similarity=0.237 Sum_probs=61.1
Q ss_pred hhHHHHHHHHHHhccceEEEEE--EEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCC
Q 001304 540 TRTFVEAVEQYSQLGLRTLCLA--WREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (1104)
Q Consensus 540 ~~~~~~~~~~~a~~GlR~l~~A--~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~ 617 (1104)
++++.+.+.+..+.|.+-+++- -+..++.+++...+..+. +.++. -++.+....+..
T Consensus 42 ~eeI~~~a~~a~~~g~~~~~lv~sg~~~~~~~~e~~~ei~~~--------------ik~~~-p~l~i~~s~G~~------ 100 (279)
T PRK08508 42 IEQIVQEAKMAKANGALGFCLVTSGRGLDDKKLEYVAEAAKA--------------VKKEV-PGLHLIACNGTA------ 100 (279)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeccCCCCcccHHHHHHHHHH--------------HHhhC-CCcEEEecCCCC------
Confidence 4566666666667788777763 222332222211111111 11111 134444444433
Q ss_pred hHHHHHHHHHcCCe-EE------------EEcCCCHhH---HHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHH
Q 001304 618 VPETIETLRKAGIN-FW------------MLTGDKQNT---AIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (1104)
Q Consensus 618 ~~~~I~~l~~aGI~-v~------------mlTGD~~~t---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1104)
.++.+++|++||+. +- +.||...+. +...|+++|+-... +.++-+ |.+.++..+.+...
T Consensus 101 ~~e~l~~Lk~aGld~~~~~lEt~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~s--g~I~Gl-GEt~ed~~~~l~~l 175 (279)
T PRK08508 101 SVEQLKELKKAGIFSYNHNLETSKEFFPKICTTHTWEERFQTCENAKEAGLGLCS--GGIFGL-GESWEDRISFLKSL 175 (279)
T ss_pred CHHHHHHHHHcCCCEEcccccchHHHhcCCCCCCCHHHHHHHHHHHHHcCCeecc--eeEEec-CCCHHHHHHHHHHH
Confidence 58999999999983 33 456665555 44568888873332 123334 66666666555433
No 211
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=32.12 E-value=67 Score=30.30 Aligned_cols=39 Identities=23% Similarity=0.487 Sum_probs=29.9
Q ss_pred CCCChHHHHHHHHHcCC-eEEEEcCCCHhHHHHHHHHcCC
Q 001304 614 LQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI-~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
..+.+++.++++.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 34578899999999999 5999999999999999999887
No 212
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=31.90 E-value=2.1e+02 Score=30.61 Aligned_cols=39 Identities=15% Similarity=0.213 Sum_probs=30.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhH----HHHHHHHcCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNT----AIQIALSCNF 652 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~t----a~~ia~~~gi 652 (1104)
+=+|+.|.++...+.|.+|..+|.|..++ .+.--++.|+
T Consensus 123 ~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~ 165 (274)
T COG2503 123 AVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGL 165 (274)
T ss_pred cCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCc
Confidence 45899999999999999999999998765 2333445555
No 213
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=29.56 E-value=86 Score=33.72 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=35.2
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHH-cCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALS-CNF 652 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~-~gi 652 (1104)
|++--.+.+=+++.++|+.++++|++++++| |+..........+ .|+
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~ 57 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGV 57 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 3444446667799999999999999999998 6666665554555 665
No 214
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=29.48 E-value=1.1e+02 Score=25.81 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=24.3
Q ss_pred ceEEEEEECCeEEEEe---ccCCccceEEEEecCC
Q 001304 100 EKEVWVVKQGIKKLIQ---SQDIRVGNIVWLREND 131 (1104)
Q Consensus 100 ~~~~~V~r~g~~~~i~---~~~lvvGDIV~l~~g~ 131 (1104)
...+.|-.+|..++++ ..++.|||.|.+..|-
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 4567788889888886 4678999999999983
No 215
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=28.36 E-value=28 Score=35.65 Aligned_cols=14 Identities=36% Similarity=0.539 Sum_probs=12.5
Q ss_pred EEecCCCCCCCcce
Q 001304 378 ILTDKTGTLTENRM 391 (1104)
Q Consensus 378 I~~DKTGTLT~n~m 391 (1104)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 68999999999873
No 216
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=27.30 E-value=65 Score=29.34 Aligned_cols=33 Identities=24% Similarity=0.400 Sum_probs=24.4
Q ss_pred hcceEEEEEECCeEEEEeccCCccceEEEEecCCcc
Q 001304 98 ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEV 133 (1104)
Q Consensus 98 ~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~v 133 (1104)
.....+++ ||... -+++++++||+|.|.-|...
T Consensus 31 ~~~GrV~v--NG~~a-KpS~~VK~GD~l~i~~~~~~ 63 (100)
T COG1188 31 IEGGRVKV--NGQRA-KPSKEVKVGDILTIRFGNKE 63 (100)
T ss_pred HHCCeEEE--CCEEc-ccccccCCCCEEEEEeCCcE
Confidence 34444444 66655 78999999999999988653
No 217
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=27.25 E-value=39 Score=29.70 Aligned_cols=27 Identities=33% Similarity=0.602 Sum_probs=18.7
Q ss_pred EeccCCccceEEEE-ecCCcccceEEEE
Q 001304 114 IQSQDIRVGNIVWL-RENDEVPCDLVLI 140 (1104)
Q Consensus 114 i~~~~lvvGDIV~l-~~g~~vPaD~~ll 140 (1104)
+.-.+|.+||.|.+ +.||.||-=.-++
T Consensus 45 i~~~~i~~Gd~V~V~raGdVIP~I~~vv 72 (82)
T PF03120_consen 45 IKELDIRIGDTVLVTRAGDVIPKIVGVV 72 (82)
T ss_dssp HHHTT-BBT-EEEEEEETTTEEEEEEE-
T ss_pred HHHcCCCCCCEEEEEECCCccceEeEee
Confidence 45689999999988 6899999644444
No 218
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=27.11 E-value=1.1e+02 Score=34.04 Aligned_cols=37 Identities=11% Similarity=0.249 Sum_probs=26.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHH-HHHHcCC
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQ-IALSCNF 652 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~-ia~~~gi 652 (1104)
+|+...=+.|+.-|.+++++|.+....+.. ..+.+++
T Consensus 63 ~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 63 PGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred HHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 456666788889999999999887666544 4444554
No 219
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=26.94 E-value=4.6e+02 Score=24.62 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=23.2
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
+++.+.++.+++.|++++.+|++....
T Consensus 74 ~~~~~~~~~a~~~g~~iv~iT~~~~~~ 100 (139)
T cd05013 74 KETVEAAEIAKERGAKVIAITDSANSP 100 (139)
T ss_pred HHHHHHHHHHHHcCCeEEEEcCCCCCh
Confidence 567889999999999999999986643
No 220
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=26.18 E-value=4.9e+02 Score=25.18 Aligned_cols=81 Identities=20% Similarity=0.233 Sum_probs=57.8
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
.-+...|+.|+-.+.. .+.+++-+ ...|.+-..+|+-++...-.+.+++.++.|++
T Consensus 24 ~~l~~~GfeVi~lg~~-~s~e~~v~-----------------------aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~ 79 (132)
T TIGR00640 24 TAYADLGFDVDVGPLF-QTPEEIAR-----------------------QAVEADVHVVGVSSLAGGHLTLVPALRKELDK 79 (132)
T ss_pred HHHHhCCcEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEcCchhhhHHHHHHHHHHHHh
Confidence 4567789999987743 23333221 23457889999999999889999999999999
Q ss_pred cCC-eE-EEEcCCCHhHHHHHHHHcCC
Q 001304 628 AGI-NF-WMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 628 aGI-~v-~mlTGD~~~ta~~ia~~~gi 652 (1104)
+|. ++ +++=|-.+..-..-.+++|+
T Consensus 80 ~g~~~i~vivGG~~~~~~~~~l~~~Gv 106 (132)
T TIGR00640 80 LGRPDILVVVGGVIPPQDFDELKEMGV 106 (132)
T ss_pred cCCCCCEEEEeCCCChHhHHHHHHCCC
Confidence 987 43 55555455444566788887
No 221
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=25.28 E-value=2.1e+02 Score=30.96 Aligned_cols=45 Identities=18% Similarity=0.335 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 657 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 657 (1104)
.+|+++.+.++.|++.+|.+.+.|+-=......+-++.|...++.
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv 134 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNV 134 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTE
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCe
Confidence 589999999999999999999999887777777777778766653
No 222
>PF15584 Imm44: Immunity protein 44
Probab=24.15 E-value=35 Score=30.28 Aligned_cols=20 Identities=20% Similarity=0.366 Sum_probs=16.2
Q ss_pred cceEEEEecCCcccceEEEE
Q 001304 121 VGNIVWLRENDEVPCDLVLI 140 (1104)
Q Consensus 121 vGDIV~l~~g~~vPaD~~ll 140 (1104)
+.+-..|+.|++|||||+-=
T Consensus 13 ~~~~~~I~SG~~iP~~GIwE 32 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIWE 32 (94)
T ss_pred CCCCCEEecCCCcccCCeEc
Confidence 34556789999999999875
No 223
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=23.31 E-value=6.7e+02 Score=26.58 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=65.4
Q ss_pred EEEecChHHhhhhhhccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhc
Q 001304 520 SLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLE 599 (1104)
Q Consensus 520 ~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie 599 (1104)
.+-|+--...++....+.. ..++.+...++-++|++-..++--..+....+-|. |.++...+++ +
T Consensus 22 ~lnC~HCg~~~L~~Mi~vt-~~~l~k~~~el~kkGy~g~llSGGm~srg~VPl~k--f~d~lK~lke------------~ 86 (275)
T COG1856 22 SLNCPHCGRHYLEHMIKVT-TKSLLKRCMELEKKGYEGCLLSGGMDSRGKVPLWK--FKDELKALKE------------R 86 (275)
T ss_pred EecChHHHHHHHHHhcccc-hHHHHHHHHHHHhcCceeEEEeCCcCCCCCccHHH--HHHHHHHHHH------------h
Confidence 3445444444444333332 26677888899999999998887666665555552 2222222222 2
Q ss_pred cCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEE--cCCCH
Q 001304 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML--TGDKQ 640 (1104)
Q Consensus 600 ~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~ml--TGD~~ 640 (1104)
..|.+..-+|+.|+ +-++++++++++++.+ -||+.
T Consensus 87 ~~l~inaHvGfvdE------~~~eklk~~~vdvvsLDfvgDn~ 123 (275)
T COG1856 87 TGLLINAHVGFVDE------SDLEKLKEELVDVVSLDFVGDND 123 (275)
T ss_pred hCeEEEEEeeeccH------HHHHHHHHhcCcEEEEeecCChH
Confidence 57999999999883 6789999999998876 57764
No 224
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.16 E-value=9e+02 Score=26.84 Aligned_cols=180 Identities=18% Similarity=0.198 Sum_probs=87.7
Q ss_pred ccCCCChHHHHHHHHHcCCe---EEEEcCCCHhHH------HHHHHHcCCCCCCCCCeEEEecCC-cHHHHHHHHHHHHH
Q 001304 612 DRLQDGVPETIETLRKAGIN---FWMLTGDKQNTA------IQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVLL 681 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~ta------~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 681 (1104)
++++++.++.++.+++.|++ ..++-||++... ...|.++|+... .+.+... +.+++...+++.-+
T Consensus 12 ~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~-----~~~l~~~~~~~el~~~I~~lN~ 86 (284)
T PRK14170 12 KEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSV-----LIELPENVTEEKLLSVVEELNE 86 (284)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE-----EEECCCCCCHHHHHHHHHHHhC
Confidence 44567788889999888875 467789887655 456778888432 3344433 33444444443321
Q ss_pred HccccCCCCCceEEE---EcchhHHHHHHH---H-------HHHHHhHhhhccceeeeccChhhHHHHHHHHHh--cCCe
Q 001304 682 TMRITTSEPKDVAFV---VDGWALEIALKH---Y-------RKAFTELAILSRTAICCRVTPSQKAQLVELLKS--CDYR 746 (1104)
Q Consensus 682 ~~~~~~~~~~~~~lv---i~g~~l~~~~~~---~-------~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~--~~~~ 746 (1104)
. . ....+.+- ..+-....+++. . ...+..+.. ...-+.=+||.-=.++++...- .|+.
T Consensus 87 D----~-~V~GIivqlPlP~~i~~~~i~~~I~p~KDVDGl~p~N~g~l~~--~~~~~~PcTp~avi~lL~~~~i~l~Gk~ 159 (284)
T PRK14170 87 D----K-TIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI--GKDSFVPCTPAGIIELIKSTGTQIEGKR 159 (284)
T ss_pred C----C-CCCeEEEecCCCCCCCHHHHHhccCcccCcccCChhhhhHHhC--CCCCCCCCCHHHHHHHHHHhCCCCCCCE
Confidence 1 1 00000000 001111111110 0 011111111 1112344555544444443321 4889
Q ss_pred EEEEcCCcc----ChhhhhhcCceEEe--cCCc-hHHHhhhcceecc---cchhhHHHHHhhhhhhh
Q 001304 747 TLAIGDGGN----DVRMIQKADIGVGI--SGRE-GLQAARAADYSIG---KFRFLKRLILVHGRYSY 803 (1104)
Q Consensus 747 v~~iGDG~N----D~~ml~~AdvGIam--~g~~-~~~a~~~AD~vl~---~f~~l~~lll~~GR~~~ 803 (1104)
+..+|-|.. =+.||...+..|.+ +.+. -.+..+.||+++. .-+++..-.+..|....
T Consensus 160 vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~~~~i~~~~vk~GavVI 226 (284)
T PRK14170 160 AVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVI 226 (284)
T ss_pred EEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEecCCcCccCHHHcCCCCEEE
Confidence 999998754 23466555555543 3222 2234568999985 44455444445555443
No 225
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=23.13 E-value=1.9e+02 Score=23.58 Aligned_cols=40 Identities=8% Similarity=0.189 Sum_probs=25.8
Q ss_pred ccccccCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 246 KLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGT 285 (1104)
Q Consensus 246 ~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~ 285 (1104)
+.|.|.-..+.+.+.+...++.+...+.+++++++++.++
T Consensus 22 ~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~ 61 (64)
T smart00831 22 RYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSAL 61 (64)
T ss_pred HhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4555554555667888888888877666666555555443
No 226
>PRK14584 hmsS hemin storage system protein; Provisional
Probab=23.13 E-value=4.6e+02 Score=26.06 Aligned_cols=14 Identities=29% Similarity=0.532 Sum_probs=8.9
Q ss_pred ceEEEEecCCcccc
Q 001304 122 GNIVWLRENDEVPC 135 (1104)
Q Consensus 122 GDIV~l~~g~~vPa 135 (1104)
|.|+.|+.|..+|-
T Consensus 132 G~Ii~V~~~~~~p~ 145 (153)
T PRK14584 132 GHIIDVKEGLQLPE 145 (153)
T ss_pred CCEEEeecCCCCCC
Confidence 66666666666653
No 227
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=23.11 E-value=2.8e+02 Score=31.41 Aligned_cols=47 Identities=19% Similarity=0.276 Sum_probs=35.9
Q ss_pred EEEeecccCCCChHHHHHHHHHc----CCeEEEEcCCC---HhH-HHHHHHHcCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKA----GINFWMLTGDK---QNT-AIQIALSCNF 652 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~a----GI~v~mlTGD~---~~t-a~~ia~~~gi 652 (1104)
|++.-.+++-+++.++++.|++. |+++..+|-.. ..+ +..+.++.|+
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~ 63 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV 63 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC
Confidence 66667788899999999999999 99999999654 333 3444466665
No 228
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=23.01 E-value=7.4e+02 Score=26.50 Aligned_cols=128 Identities=16% Similarity=0.235 Sum_probs=73.8
Q ss_pred hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEE--EecCCcHHHHHHHHHHHHHHccccCCCCCceEE
Q 001304 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL--SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (1104)
Q Consensus 618 ~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (1104)
+.|-++.|++.||..-++-|=+..+|.+-+-.+.+--|+-.+.++ ...|.+.....+.+...- ...-..++
T Consensus 92 ~~EQm~~L~~~gI~yevvPGVss~~AAAA~L~~ELT~P~vsQtvilTR~sgrt~vpe~e~l~~la-------~~~aTm~I 164 (254)
T COG2875 92 LAEQMRELEALGIPYEVVPGVSSFAAAAAALGIELTVPGVSQTVILTRPSGRTPVPEKESLAALA-------KHGATMVI 164 (254)
T ss_pred HHHHHHHHHHcCCCeEEeCCchHHHHHHHHhCceeecCCcceeEEEEccccCCCCCchhHHHHHH-------hcCceeEe
Confidence 357899999999999999999988887776666665554443333 244554322122222111 11223344
Q ss_pred EEcchhHHHHHHHHHH-HHHhHhhhccceeeeccCh-hhH------HHHHHHHHhcC---CeEEEEcCCcc
Q 001304 696 VVDGWALEIALKHYRK-AFTELAILSRTAICCRVTP-SQK------AQLVELLKSCD---YRTLAIGDGGN 755 (1104)
Q Consensus 696 vi~g~~l~~~~~~~~~-~f~~l~~~~~~~i~~r~sP-~qK------~~iV~~lk~~~---~~v~~iGDG~N 755 (1104)
...-..++.+.+++.+ ++.. -+...|++|.+- ++| ..|...+++.| --.+.+||..+
T Consensus 165 ~L~v~~I~~vv~~L~~g~y~~---dtPVaVV~rAsWpDe~ii~GTL~dIa~kv~~~~i~rTAlIiVG~~l~ 232 (254)
T COG2875 165 FLGVHAIDKVVEELLEGGYPP---DTPVAVVYRASWPDEKIIRGTLEDIAEKVKEAGIRRTALIIVGDVLD 232 (254)
T ss_pred eehhhHHHHHHHHHhcCCCCC---CCCEEEEEecCCCcccEEEeeHHHHHHHHHhcCceeEEEEEEccccC
Confidence 4444555555554433 2211 234556777764 455 56777777755 23568898765
No 229
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=22.63 E-value=1.3e+02 Score=30.14 Aligned_cols=43 Identities=16% Similarity=0.022 Sum_probs=37.4
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 610 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
..=.+||++.+.++.|++. +++.+.|.-....|..+.+.++..
T Consensus 55 ~~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 55 YLTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 3345799999999999955 999999999999999999988764
No 230
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.53 E-value=5.7e+02 Score=28.38 Aligned_cols=179 Identities=17% Similarity=0.187 Sum_probs=89.9
Q ss_pred ccCCCChHHHHHHHHHc-CCeE---EEEcCCCHhHH------HHHHHHcCCCCCCCCCeEEEecCC-cHHHHHHHHHHHH
Q 001304 612 DRLQDGVPETIETLRKA-GINF---WMLTGDKQNTA------IQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVL 680 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~a-GI~v---~mlTGD~~~ta------~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 680 (1104)
+.++++.++.++.+++. |++. .++-||++.+. ...|.++|+... .+.+... +.+++...+++.-
T Consensus 12 ~~i~~~lk~~v~~l~~~~g~~P~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~-----~~~l~~~~~~~~l~~~I~~lN 86 (284)
T PRK14179 12 QKMQAELAEKVAKLKEEKGIVPGLVVILVGDNPASQVYVRNKERSALAAGFKSE-----VVRLPETISQEELLDLIERYN 86 (284)
T ss_pred HHHHHHHHHHHHHHHhccCCCceEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE-----EEECCCCCCHHHHHHHHHHHh
Confidence 34566777888888776 6643 56778877654 456778887432 3344332 3444544444332
Q ss_pred HHccccCCCCCceEEEE-----cchhHHHHHHH---H-------HHHHHhHhhhccceeeeccChhhHHHHHHHHHh--c
Q 001304 681 LTMRITTSEPKDVAFVV-----DGWALEIALKH---Y-------RKAFTELAILSRTAICCRVTPSQKAQLVELLKS--C 743 (1104)
Q Consensus 681 ~~~~~~~~~~~~~~lvi-----~g~~l~~~~~~---~-------~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~--~ 743 (1104)
+.-. . ..+++ ..-.-..+++. . ...+..+.. ...-+.=+||.-=.++++...- .
T Consensus 87 ~d~~-----V--~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~--~~~~~~PcTp~avi~lL~~~~i~l~ 157 (284)
T PRK14179 87 QDPT-----W--HGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWS--GRPVMIPCTPAGIMEMFREYNVELE 157 (284)
T ss_pred CCCC-----C--CEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhC--CCCCCcCCCHHHHHHHHHHhCCCCC
Confidence 1110 0 01111 00011111110 0 011111111 1122444566554444443322 4
Q ss_pred CCeEEEEcC-CccChh---hhhhcCceEEecCC---chHHHhhhcceecc---cchhhHHHHHhhhhhhhh
Q 001304 744 DYRTLAIGD-GGNDVR---MIQKADIGVGISGR---EGLQAARAADYSIG---KFRFLKRLILVHGRYSYN 804 (1104)
Q Consensus 744 ~~~v~~iGD-G~ND~~---ml~~AdvGIam~g~---~~~~a~~~AD~vl~---~f~~l~~lll~~GR~~~~ 804 (1104)
|+.++++|- |.-=.| +|..++..|.+... .-.+..+.||+++. +.+++....+..|....+
T Consensus 158 Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~avg~~~~v~~~~ik~GavVID 228 (284)
T PRK14179 158 GKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVAIGRGHFVTKEFVKEGAVVID 228 (284)
T ss_pred CCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEecCccccCCHHHccCCcEEEE
Confidence 889999999 444444 67777777766321 12335678999985 566666655666765444
No 231
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=22.15 E-value=1.3e+02 Score=24.02 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=28.3
Q ss_pred cceEEEEE-ECCeEEEEec-cCCccceEEEEecCCcccc
Q 001304 99 NEKEVWVV-KQGIKKLIQS-QDIRVGNIVWLRENDEVPC 135 (1104)
Q Consensus 99 n~~~~~V~-r~g~~~~i~~-~~lvvGDIV~l~~g~~vPa 135 (1104)
....+.|+ .||++.+|+. .+..+||-|.+.+.+..+.
T Consensus 4 ~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 4 KKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred cCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 45566666 4889988874 3699999999998887664
No 232
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=21.17 E-value=8.8e+02 Score=26.87 Aligned_cols=178 Identities=13% Similarity=0.141 Sum_probs=88.7
Q ss_pred ccCCCChHHHHHHHHHcCCe---EEEEcCCCHhHH------HHHHHHcCCCCCCCCCeEEEecCC-cHHHHHHHHHHHHH
Q 001304 612 DRLQDGVPETIETLRKAGIN---FWMLTGDKQNTA------IQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLERVLL 681 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~---v~mlTGD~~~ta------~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 681 (1104)
++++++.++.++.+++.|++ ..++-||++.+. ...|.++|+... .+.+... +.+++...+++.-+
T Consensus 11 ~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~-----~~~l~~~~~~~el~~~I~~lN~ 85 (282)
T PRK14169 11 KKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSL-----MFRLPEATTQADLLAKVAELNH 85 (282)
T ss_pred HHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEE-----EEECCCCCCHHHHHHHHHHHhC
Confidence 34567778889999888875 366788887655 456778887432 3444433 34445444443311
Q ss_pred HccccCCCCCceEEEE-----cchhHHHHHHH---H-------HHHHHhHhhhccceeeeccChhhHHHHHHHHHh--cC
Q 001304 682 TMRITTSEPKDVAFVV-----DGWALEIALKH---Y-------RKAFTELAILSRTAICCRVTPSQKAQLVELLKS--CD 744 (1104)
Q Consensus 682 ~~~~~~~~~~~~~lvi-----~g~~l~~~~~~---~-------~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~--~~ 744 (1104)
. . .. ..+++ .+-.-..+++. . ...+..+.. ...-+.=+||.-=.++++...- .|
T Consensus 86 D----~-~V--~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~--~~~~~~PcTp~avi~lL~~~~i~l~G 156 (282)
T PRK14169 86 D----P-DV--DAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWA--NEPTVVASTPYGIMALLDAYDIDVAG 156 (282)
T ss_pred C----C-CC--CEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhc--CCCCCCCCCHHHHHHHHHHhCCCCCC
Confidence 1 0 00 01111 01111111111 0 001111111 1122344555554444444432 57
Q ss_pred CeEEEEcCCcc----ChhhhhhcCceEEec--CCc-hHHHhhhcceecc---cchhhHHHHHhhhhhhh
Q 001304 745 YRTLAIGDGGN----DVRMIQKADIGVGIS--GRE-GLQAARAADYSIG---KFRFLKRLILVHGRYSY 803 (1104)
Q Consensus 745 ~~v~~iGDG~N----D~~ml~~AdvGIam~--g~~-~~~a~~~AD~vl~---~f~~l~~lll~~GR~~~ 803 (1104)
+.+..+|-+.. =+.||...+..|.+. .+. -.+..+.||+++. .-+++..=.+..|....
T Consensus 157 k~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~AvG~p~~i~~~~vk~GavVI 225 (282)
T PRK14169 157 KRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVAVGVPHFIGADAVKPGAVVI 225 (282)
T ss_pred CEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCcEEE
Confidence 89999998754 344666666666552 221 2234568999985 45555444445555443
No 233
>PRK10053 hypothetical protein; Provisional
Probab=21.17 E-value=62 Score=31.17 Aligned_cols=26 Identities=15% Similarity=0.380 Sum_probs=22.3
Q ss_pred ccccccccccccceEEEEecCCCCCC
Q 001304 362 HATNTAISEDLAQVEYILTDKTGTLT 387 (1104)
Q Consensus 362 ~~~~~~~~E~Lg~v~~I~~DKTGTLT 387 (1104)
..-...++..||.=.|+|.|+||+++
T Consensus 64 V~L~G~Iv~~lg~d~Y~F~D~tG~I~ 89 (130)
T PRK10053 64 VSLRGNLIDHKGDDRYVFRDKSGEIN 89 (130)
T ss_pred EEEEEEEEEEeCCceEEEECCCCcEE
Confidence 35577889999999999999999864
No 234
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=20.62 E-value=4.2e+02 Score=25.54 Aligned_cols=80 Identities=14% Similarity=0.231 Sum_probs=55.6
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHc
Q 001304 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (1104)
Q Consensus 549 ~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~a 628 (1104)
-+...|+.|+-++... +.+++-+ ...|.+-.++|+-++--.--+..+++++.|+++
T Consensus 22 ~L~~~GfeVidLG~~v-~~e~~v~-----------------------aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~ 77 (128)
T cd02072 22 AFTEAGFNVVNLGVLS-PQEEFID-----------------------AAIETDADAILVSSLYGHGEIDCKGLREKCDEA 77 (128)
T ss_pred HHHHCCCEEEECCCCC-CHHHHHH-----------------------HHHHcCCCEEEEeccccCCHHHHHHHHHHHHHC
Confidence 3457899999888543 2222211 234568899999999888888999999999999
Q ss_pred CC-eE-EEEcCCCH------hHHHHHHHHcCC
Q 001304 629 GI-NF-WMLTGDKQ------NTAIQIALSCNF 652 (1104)
Q Consensus 629 GI-~v-~mlTGD~~------~ta~~ia~~~gi 652 (1104)
|+ .+ +++-|-.. .....-.+++|+
T Consensus 78 gl~~v~vivGG~~~i~~~d~~~~~~~L~~~Gv 109 (128)
T cd02072 78 GLKDILLYVGGNLVVGKQDFEDVEKRFKEMGF 109 (128)
T ss_pred CCCCCeEEEECCCCCChhhhHHHHHHHHHcCC
Confidence 98 54 55555522 223455778886
No 235
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=20.53 E-value=1.1e+03 Score=26.98 Aligned_cols=184 Identities=17% Similarity=0.188 Sum_probs=89.1
Q ss_pred ecccCCCChHHHHHHHHHc-CCe---EEEEcCCCHhHH------HHHHHHcCCCCCCCCCeEEEecCC-cHHHHHHHHHH
Q 001304 610 IEDRLQDGVPETIETLRKA-GIN---FWMLTGDKQNTA------IQIALSCNFISPEPKGQLLSIDGK-TEDEVCRSLER 678 (1104)
Q Consensus 610 i~D~lr~~~~~~I~~l~~a-GI~---v~mlTGD~~~ta------~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~ 678 (1104)
+.++++++.++.++.+++. |++ ..++-||++... ...|.++||... .+.+... +++++...+++
T Consensus 64 vA~~i~~~lk~~v~~l~~~~g~~P~LaiIlvGddpaS~~Yv~~k~K~a~~~GI~~~-----~~~l~~~~te~ell~~I~~ 138 (345)
T PLN02897 64 IAEEIRTKIASEVRKMKKAVGKVPGLAVVLVGQQRDSQTYVRNKIKACEETGIKSL-----LAELPEDCTEGQILSALRK 138 (345)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCeEEEEEeCCChHHHHHHHHHHHHHHhcCCEEE-----EEECCCCCCHHHHHHHHHH
Confidence 3445667778888888877 764 457788887655 456778887432 3344433 34445444443
Q ss_pred HHHHccccCCCCCceEEE---EcchhHHHHHHH---H-------HHHHHhHhhhccceeeeccChhhHHHHHHHHHh--c
Q 001304 679 VLLTMRITTSEPKDVAFV---VDGWALEIALKH---Y-------RKAFTELAILSRTAICCRVTPSQKAQLVELLKS--C 743 (1104)
Q Consensus 679 ~~~~~~~~~~~~~~~~lv---i~g~~l~~~~~~---~-------~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~--~ 743 (1104)
.-+.- ....+.+- -.+-.-..+++. . ...+..+..-.+..-+.=+||.-=.++++...- .
T Consensus 139 lN~D~-----~V~GIlVQlPLP~hid~~~i~~~I~p~KDVDGl~p~N~G~L~~~~~~~~~~PCTp~avi~LL~~~~i~l~ 213 (345)
T PLN02897 139 FNEDT-----SIHGILVQLPLPQHLDESKILNMVRLEKDVDGFHPLNVGNLAMRGREPLFVSCTPKGCVELLIRSGVEIA 213 (345)
T ss_pred HhCCC-----CCCEEEEeCCCCCCCCHHHHHhccCcccCccCCCHHHHHHHhcCCCCCCCcCCCHHHHHHHHHHhCCCCC
Confidence 32111 00000000 001111111110 0 011111111011123444566554444443322 4
Q ss_pred CCeEEEEcCCcc----ChhhhhhcCceEEe--cC-CchHHHhhhcceecc---cchhhHHHHHhhhhhhh
Q 001304 744 DYRTLAIGDGGN----DVRMIQKADIGVGI--SG-REGLQAARAADYSIG---KFRFLKRLILVHGRYSY 803 (1104)
Q Consensus 744 ~~~v~~iGDG~N----D~~ml~~AdvGIam--~g-~~~~~a~~~AD~vl~---~f~~l~~lll~~GR~~~ 803 (1104)
|+.+..+|-+.- =+.||...|.-|.+ +- .+-.+..+.||+++. .-+++..-.+..|....
T Consensus 214 GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsAvGkp~~v~~d~vk~GavVI 283 (345)
T PLN02897 214 GKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAAAGIPNLVRGSWLKPGAVVI 283 (345)
T ss_pred CCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEccCCcCccCHHHcCCCCEEE
Confidence 889999998644 34467666666644 22 223345578999985 44555444445555443
No 236
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=20.38 E-value=1e+02 Score=32.48 Aligned_cols=82 Identities=17% Similarity=0.186 Sum_probs=56.2
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
.-+...|++++=++. +.+.++|-+ .--|.+-.++|..++--.--.+.++.++.|++
T Consensus 126 ~ml~~aGfevidLG~-dvP~e~fve-----------------------~a~e~k~d~v~~SalMTttm~~~~~viE~L~e 181 (227)
T COG5012 126 TMLEAAGFEVIDLGR-DVPVEEFVE-----------------------KAKELKPDLVSMSALMTTTMIGMKDVIELLKE 181 (227)
T ss_pred HHHHhCCcEEEecCC-CCCHHHHHH-----------------------HHHHcCCcEEechHHHHHHHHHHHHHHHHHHH
Confidence 344567999998883 444444332 12235678889998888888889999999999
Q ss_pred cCCeEEEEcC-CCHhHHHHHHHHcCCC
Q 001304 628 AGINFWMLTG-DKQNTAIQIALSCNFI 653 (1104)
Q Consensus 628 aGI~v~mlTG-D~~~ta~~ia~~~gi~ 653 (1104)
+|+|--+++| ---......|++.|-.
T Consensus 182 eGiRd~v~v~vGGApvtq~~a~~iGAD 208 (227)
T COG5012 182 EGIRDKVIVMVGGAPVTQDWADKIGAD 208 (227)
T ss_pred cCCccCeEEeecCccccHHHHHHhCCC
Confidence 9998555554 2222445677777763
No 237
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=20.11 E-value=92 Score=33.58 Aligned_cols=23 Identities=26% Similarity=0.364 Sum_probs=19.5
Q ss_pred CeEEEEcCC-ccChhhhhhcCceE
Q 001304 745 YRTLAIGDG-GNDVRMIQKADIGV 767 (1104)
Q Consensus 745 ~~v~~iGDG-~ND~~ml~~AdvGI 767 (1104)
+.++||||. .+|+.+=+.|++-.
T Consensus 214 ~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 214 NRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred ccEEEECCCcHHHHHHHHHCCCeE
Confidence 479999999 59999988888754
No 238
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=20.01 E-value=1.4e+02 Score=34.10 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=34.3
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc-C
Q 001304 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-N 651 (1104)
Q Consensus 615 r~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~-g 651 (1104)
-|+++++++.|+++|+++.++|+-....+..+...+ |
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 679999999999999999999999999999888885 5
Done!