Query 001304
Match_columns 1104
No_of_seqs 442 out of 3496
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 21:16:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001304.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001304hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 6E-109 2E-113 1063.5 70.2 872 12-1018 80-1027(1034)
2 3ar4_A Sarcoplasmic/endoplasmi 100.0 3E-106 9E-111 1038.5 67.1 872 12-1014 32-992 (995)
3 2zxe_A Na, K-ATPase alpha subu 100.0 3E-107 1E-111 1045.3 54.8 866 12-1014 75-1017(1028)
4 1mhs_A Proton pump, plasma mem 100.0 1.2E-97 4E-102 930.9 47.2 762 12-1010 95-877 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 8.7E-96 3E-100 915.9 -11.0 678 12-908 40-727 (885)
6 3rfu_A Copper efflux ATPase; a 100.0 3.8E-68 1.3E-72 654.0 39.2 493 72-821 190-693 (736)
7 3j08_A COPA, copper-exporting 100.0 1.6E-66 5.4E-71 636.4 48.6 485 73-820 99-594 (645)
8 3j09_A COPA, copper-exporting 100.0 3.8E-66 1.3E-70 641.8 49.7 485 73-820 177-672 (723)
9 2yj3_A Copper-transporting ATP 99.8 4.2E-25 1.5E-29 242.0 0.0 137 600-807 123-261 (263)
10 3a1c_A Probable copper-exporti 99.9 1.5E-21 5E-26 217.1 18.2 271 357-806 14-286 (287)
11 2hc8_A PACS, cation-transporti 99.9 3.1E-22 1.1E-26 186.1 9.4 102 93-251 4-105 (113)
12 3skx_A Copper-exporting P-type 99.8 2.6E-19 9E-24 197.9 25.1 271 363-812 1-273 (280)
13 2kij_A Copper-transporting ATP 99.8 1.4E-20 4.7E-25 178.4 8.2 103 93-252 10-118 (124)
14 3gwi_A Magnesium-transporting 99.7 1.6E-18 5.6E-23 174.5 3.8 138 429-613 17-165 (170)
15 4fe3_A Cytosolic 5'-nucleotida 99.5 5.8E-14 2E-18 156.5 8.8 141 611-794 139-289 (297)
16 4dw8_A Haloacid dehalogenase-l 99.1 2.2E-10 7.6E-15 126.1 14.2 188 613-801 22-275 (279)
17 3dnp_A Stress response protein 99.1 3E-10 1E-14 125.8 14.6 192 613-806 23-285 (290)
18 3mpo_A Predicted hydrolase of 99.1 3.5E-10 1.2E-14 124.5 13.0 173 613-787 22-255 (279)
19 3mn1_A Probable YRBI family ph 99.1 2.8E-10 9.4E-15 117.5 10.5 135 602-815 41-185 (189)
20 3dao_A Putative phosphatse; st 99.1 4.3E-10 1.5E-14 124.2 12.3 176 613-789 39-271 (283)
21 3pgv_A Haloacid dehalogenase-l 99.0 5.9E-10 2E-14 123.2 11.9 171 612-783 37-263 (285)
22 1l6r_A Hypothetical protein TA 99.0 3.4E-10 1.2E-14 120.4 9.6 172 611-789 20-213 (227)
23 3l7y_A Putative uncharacterize 99.0 5.3E-10 1.8E-14 124.8 9.1 176 613-789 54-288 (304)
24 3n07_A 3-deoxy-D-manno-octulos 98.9 2.6E-09 9E-14 110.4 7.7 97 620-788 59-159 (195)
25 3ij5_A 3-deoxy-D-manno-octulos 98.9 6E-09 2E-13 109.1 10.1 107 604-788 73-183 (211)
26 3fzq_A Putative hydrolase; YP_ 98.9 8.2E-09 2.8E-13 113.0 11.8 172 613-789 22-260 (274)
27 2pq0_A Hypothetical conserved 98.8 1.6E-08 5.6E-13 109.7 13.6 172 613-788 20-242 (258)
28 3ewi_A N-acylneuraminate cytid 98.8 4.8E-09 1.6E-13 105.4 7.8 107 600-787 29-141 (168)
29 3mmz_A Putative HAD family hyd 98.8 1.4E-08 4.9E-13 103.2 10.6 94 621-787 47-144 (176)
30 1k1e_A Deoxy-D-mannose-octulos 98.8 1.4E-08 4.7E-13 103.8 10.4 102 615-788 37-142 (180)
31 1rkq_A Hypothetical protein YI 98.8 2.1E-08 7.2E-13 110.5 11.7 175 613-788 22-257 (282)
32 3r4c_A Hydrolase, haloacid deh 98.8 1.1E-08 3.8E-13 111.7 8.7 64 725-789 185-254 (268)
33 3n1u_A Hydrolase, HAD superfam 98.7 2.6E-08 8.7E-13 102.8 9.9 114 622-806 55-176 (191)
34 1rlm_A Phosphatase; HAD family 98.7 3.2E-08 1.1E-12 108.3 11.2 175 614-789 21-251 (271)
35 2b30_A Pvivax hypothetical pro 98.7 6.2E-08 2.1E-12 107.7 13.4 175 613-788 45-284 (301)
36 3n28_A Phosphoserine phosphata 98.7 2.1E-08 7.1E-13 113.5 9.5 123 613-790 178-305 (335)
37 1nf2_A Phosphatase; structural 98.7 5.7E-08 1.9E-12 106.1 11.9 173 613-788 19-249 (268)
38 3e8m_A Acylneuraminate cytidyl 98.7 5.4E-08 1.9E-12 97.6 10.2 97 621-789 39-139 (164)
39 1u02_A Trehalose-6-phosphate p 98.7 2.7E-08 9.1E-13 106.7 7.9 164 613-787 23-211 (239)
40 1s2o_A SPP, sucrose-phosphatas 98.6 6.1E-08 2.1E-12 104.2 9.2 168 617-789 23-229 (244)
41 1nrw_A Hypothetical protein, h 98.6 2.7E-07 9.1E-12 101.9 13.8 65 724-789 206-276 (288)
42 1wr8_A Phosphoglycolate phosph 98.6 1.2E-07 4.1E-12 101.0 10.5 174 612-789 19-213 (231)
43 2zos_A MPGP, mannosyl-3-phosph 98.6 1E-07 3.5E-12 102.8 9.1 166 616-787 20-239 (249)
44 2r8e_A 3-deoxy-D-manno-octulos 98.5 3.3E-07 1.1E-11 94.2 10.1 96 621-788 61-160 (188)
45 1l7m_A Phosphoserine phosphata 98.5 3.1E-07 1.1E-11 95.5 9.9 120 613-787 76-200 (211)
46 1xvi_A MPGP, YEDP, putative ma 98.4 9.2E-07 3.2E-11 96.8 13.0 171 613-787 26-256 (275)
47 3m1y_A Phosphoserine phosphata 98.4 4.1E-07 1.4E-11 95.3 9.2 124 612-790 74-202 (217)
48 4ap9_A Phosphoserine phosphata 98.4 1E-07 3.5E-12 98.4 3.7 118 613-795 79-196 (201)
49 3m9l_A Hydrolase, haloacid deh 98.4 4.7E-07 1.6E-11 94.2 8.4 126 613-801 70-201 (205)
50 1y8a_A Hypothetical protein AF 98.4 7E-07 2.4E-11 100.6 10.4 163 613-806 103-289 (332)
51 2rbk_A Putative uncharacterize 98.4 6.5E-07 2.2E-11 97.2 9.3 63 727-790 180-248 (261)
52 3zx4_A MPGP, mannosyl-3-phosph 98.4 1.7E-06 5.8E-11 93.7 12.6 164 613-787 16-233 (259)
53 3kd3_A Phosphoserine phosphohy 98.4 7.5E-07 2.6E-11 93.0 9.1 131 614-795 83-218 (219)
54 3p96_A Phosphoserine phosphata 98.3 1.6E-06 5.5E-11 100.9 11.7 123 613-790 256-383 (415)
55 4ex6_A ALNB; modified rossman 98.3 1.1E-06 3.6E-11 93.5 9.3 120 612-795 103-232 (237)
56 2fue_A PMM 1, PMMH-22, phospho 98.3 1.6E-06 5.5E-11 94.1 9.2 62 725-787 188-257 (262)
57 3mc1_A Predicted phosphatase, 98.2 1.7E-06 6E-11 91.0 8.6 119 612-795 85-214 (226)
58 1te2_A Putative phosphatase; s 98.2 3.5E-06 1.2E-10 88.4 10.7 118 613-794 94-220 (226)
59 3f9r_A Phosphomannomutase; try 98.2 1.1E-06 3.8E-11 94.3 6.5 61 721-782 174-241 (246)
60 4eze_A Haloacid dehalogenase-l 98.2 4.1E-06 1.4E-10 93.3 10.9 119 613-786 179-302 (317)
61 2p9j_A Hypothetical protein AQ 98.2 2.6E-06 8.8E-11 85.0 8.3 105 614-790 37-145 (162)
62 3nas_A Beta-PGM, beta-phosphog 98.2 4.5E-06 1.5E-10 88.3 10.0 112 613-792 92-209 (233)
63 2amy_A PMM 2, phosphomannomuta 98.2 2.6E-06 8.9E-11 91.5 8.0 59 725-784 179-245 (246)
64 2pib_A Phosphorylated carbohyd 98.1 4.2E-06 1.4E-10 87.0 8.6 118 613-795 84-212 (216)
65 1svj_A Potassium-transporting 98.1 1.9E-05 6.6E-10 77.4 12.1 141 382-616 13-156 (156)
66 3d6j_A Putative haloacid dehal 98.1 5.7E-06 1.9E-10 86.6 8.6 118 614-795 90-217 (225)
67 1swv_A Phosphonoacetaldehyde h 98.1 7E-06 2.4E-10 88.9 9.4 119 613-795 103-256 (267)
68 2go7_A Hydrolase, haloacid deh 98.1 4.9E-06 1.7E-10 85.7 7.7 118 613-794 85-203 (207)
69 3sd7_A Putative phosphatase; s 98.1 4.7E-06 1.6E-10 88.7 7.8 119 612-795 109-239 (240)
70 3s6j_A Hydrolase, haloacid deh 98.1 6.6E-06 2.3E-10 86.8 8.7 119 613-795 91-219 (233)
71 1rku_A Homoserine kinase; phos 98.0 2E-05 6.9E-10 81.6 11.8 123 613-794 69-195 (206)
72 2wf7_A Beta-PGM, beta-phosphog 98.0 4.8E-06 1.7E-10 87.1 6.9 112 613-792 91-208 (221)
73 1nnl_A L-3-phosphoserine phosp 98.0 1.2E-05 4.1E-10 84.7 8.7 129 612-793 85-221 (225)
74 3e58_A Putative beta-phosphogl 98.0 1E-05 3.4E-10 83.9 8.0 123 613-793 89-212 (214)
75 3iru_A Phoshonoacetaldehyde hy 98.0 1.2E-05 4.2E-10 87.3 9.0 120 613-795 111-264 (277)
76 2hcf_A Hydrolase, haloacid deh 97.9 1.6E-05 5.6E-10 83.9 8.8 119 613-795 93-225 (234)
77 3fvv_A Uncharacterized protein 97.9 2.8E-05 9.5E-10 82.2 10.5 105 613-770 92-204 (232)
78 3l8h_A Putative haloacid dehal 97.9 1.7E-05 5.9E-10 80.3 8.4 59 737-796 111-176 (179)
79 2hsz_A Novel predicted phospha 97.9 1.2E-05 4.1E-10 86.0 7.1 122 612-793 113-240 (243)
80 3um9_A Haloacid dehalogenase, 97.9 1.5E-05 5.2E-10 83.9 7.5 119 612-794 95-222 (230)
81 3kzx_A HAD-superfamily hydrola 97.9 2.8E-05 9.5E-10 82.1 9.2 115 613-795 103-225 (231)
82 3gyg_A NTD biosynthesis operon 97.9 8.1E-05 2.8E-09 81.8 12.9 66 724-790 201-272 (289)
83 3nuq_A Protein SSM1, putative 97.8 1.4E-05 4.8E-10 87.5 6.6 122 613-794 142-277 (282)
84 4gxt_A A conserved functionall 97.8 1.1E-05 3.9E-10 91.9 5.6 42 612-653 220-261 (385)
85 2om6_A Probable phosphoserine 97.8 2.2E-05 7.5E-10 82.8 7.4 123 613-795 99-229 (235)
86 2nyv_A Pgpase, PGP, phosphogly 97.8 2E-05 7E-10 82.8 7.0 125 612-795 82-208 (222)
87 3umb_A Dehalogenase-like hydro 97.8 2E-05 7E-10 83.1 6.9 126 612-795 98-226 (233)
88 3u26_A PF00702 domain protein; 97.8 3.4E-05 1.2E-09 81.4 8.2 123 613-795 100-226 (234)
89 4eek_A Beta-phosphoglucomutase 97.8 5.4E-05 1.9E-09 81.5 9.7 120 612-795 109-244 (259)
90 2hdo_A Phosphoglycolate phosph 97.8 1.3E-05 4.6E-10 83.1 4.6 115 613-793 83-206 (209)
91 2hoq_A Putative HAD-hydrolase 97.8 0.00012 4E-09 77.9 12.1 119 613-795 94-224 (241)
92 2no4_A (S)-2-haloacid dehaloge 97.8 5.1E-05 1.7E-09 80.7 8.9 119 613-795 105-232 (240)
93 3qnm_A Haloacid dehalogenase-l 97.7 5.3E-05 1.8E-09 80.0 8.5 121 613-801 107-236 (240)
94 3ddh_A Putative haloacid dehal 97.7 6.7E-05 2.3E-09 78.7 9.1 115 613-794 105-232 (234)
95 2fea_A 2-hydroxy-3-keto-5-meth 97.7 5.2E-05 1.8E-09 80.6 8.1 137 613-795 77-215 (236)
96 3l5k_A Protein GS1, haloacid d 97.7 1.4E-05 4.6E-10 85.8 3.5 49 745-794 191-242 (250)
97 3dv9_A Beta-phosphoglucomutase 97.7 4.2E-05 1.4E-09 81.4 6.9 121 612-795 107-237 (247)
98 3qxg_A Inorganic pyrophosphata 97.6 4.1E-05 1.4E-09 81.6 5.9 121 612-795 108-238 (243)
99 2hi0_A Putative phosphoglycola 97.6 8.8E-05 3E-09 78.9 8.4 117 613-794 110-236 (240)
100 1zrn_A L-2-haloacid dehalogena 97.6 3.4E-05 1.2E-09 81.4 5.1 123 613-793 95-220 (232)
101 2qlt_A (DL)-glycerol-3-phospha 97.6 8.1E-05 2.8E-09 81.1 7.5 120 613-791 114-244 (275)
102 2ah5_A COG0546: predicted phos 97.6 0.00013 4.5E-09 75.8 8.5 115 613-793 84-207 (210)
103 3pdw_A Uncharacterized hydrola 97.5 0.00065 2.2E-08 73.4 14.0 42 614-655 23-67 (266)
104 3ed5_A YFNB; APC60080, bacillu 97.5 0.00021 7.1E-09 75.4 9.6 119 612-795 102-230 (238)
105 2fdr_A Conserved hypothetical 97.5 0.00012 4.3E-09 76.7 7.7 115 613-795 87-219 (229)
106 3qgm_A P-nitrophenyl phosphata 97.5 0.00023 7.9E-09 77.0 9.8 45 611-655 22-69 (268)
107 3umc_A Haloacid dehalogenase; 97.5 6.3E-05 2.2E-09 80.5 5.1 116 613-795 120-250 (254)
108 3umg_A Haloacid dehalogenase; 97.5 0.00017 5.8E-09 76.8 7.9 119 613-796 116-247 (254)
109 2fi1_A Hydrolase, haloacid deh 97.5 0.00019 6.5E-09 72.9 7.8 105 614-782 83-189 (190)
110 2w43_A Hypothetical 2-haloalka 97.4 0.00016 5.6E-09 74.3 7.0 120 613-794 74-196 (201)
111 3k1z_A Haloacid dehalogenase-l 97.4 0.00016 5.5E-09 78.1 6.7 123 613-795 106-235 (263)
112 1qq5_A Protein (L-2-haloacid d 97.4 0.00016 5.4E-09 77.6 6.6 123 613-795 93-241 (253)
113 2pke_A Haloacid delahogenase-l 97.3 0.00088 3E-08 71.5 11.5 117 613-795 112-240 (251)
114 2gmw_A D,D-heptose 1,7-bisphos 97.3 0.00063 2.2E-08 70.8 9.9 59 737-795 141-203 (211)
115 3smv_A S-(-)-azetidine-2-carbo 97.3 0.00024 8.3E-09 74.8 6.1 122 613-795 99-234 (240)
116 2wm8_A MDP-1, magnesium-depend 97.2 0.00035 1.2E-08 71.1 6.9 41 613-653 68-109 (187)
117 2x4d_A HLHPP, phospholysine ph 97.2 0.0031 1E-07 67.7 14.9 41 614-654 33-76 (271)
118 3epr_A Hydrolase, haloacid deh 97.1 0.0023 7.7E-08 69.0 12.4 42 613-655 22-66 (264)
119 1vjr_A 4-nitrophenylphosphatas 97.1 0.0067 2.3E-07 65.4 15.5 43 612-654 32-77 (271)
120 3ib6_A Uncharacterized protein 97.1 0.0012 4.2E-08 67.2 8.8 129 613-795 34-174 (189)
121 2o2x_A Hypothetical protein; s 96.8 0.00099 3.4E-08 69.6 6.0 29 612-640 55-83 (218)
122 3cnh_A Hydrolase family protei 96.8 0.0013 4.4E-08 67.3 6.2 98 613-769 86-183 (200)
123 2i6x_A Hydrolase, haloacid deh 96.8 0.0003 1E-08 72.8 1.0 36 613-649 89-124 (211)
124 3vay_A HAD-superfamily hydrola 96.7 0.0016 5.5E-08 68.1 6.5 59 737-795 165-226 (230)
125 3kbb_A Phosphorylated carbohyd 96.7 0.0037 1.3E-07 64.8 9.1 41 613-653 84-124 (216)
126 2gfh_A Haloacid dehalogenase-l 96.6 0.0033 1.1E-07 67.6 8.2 117 613-794 121-248 (260)
127 2b0c_A Putative phosphatase; a 96.5 0.00041 1.4E-08 71.4 -0.4 39 735-774 156-194 (206)
128 2c4n_A Protein NAGD; nucleotid 96.4 0.0016 5.3E-08 68.9 3.8 60 732-791 177-247 (250)
129 2oda_A Hypothetical protein ps 96.3 0.012 4.3E-07 60.1 9.6 35 613-647 36-70 (196)
130 2pr7_A Haloacid dehalogenase/e 96.2 0.0022 7.7E-08 60.9 3.2 40 613-652 18-57 (137)
131 1qyi_A ZR25, hypothetical prot 96.1 0.014 4.8E-07 66.1 9.6 42 613-654 215-256 (384)
132 4dcc_A Putative haloacid dehal 96.1 0.0028 9.6E-08 66.5 3.5 35 613-648 112-146 (229)
133 2oyc_A PLP phosphatase, pyrido 96.0 0.048 1.7E-06 59.9 13.6 43 611-653 35-80 (306)
134 4gib_A Beta-phosphoglucomutase 95.9 0.013 4.4E-07 62.4 7.8 119 611-792 114-233 (250)
135 3pct_A Class C acid phosphatas 95.8 0.012 4.1E-07 62.4 6.7 43 611-653 99-145 (260)
136 2zg6_A Putative uncharacterize 95.4 0.025 8.6E-07 58.7 7.5 40 613-653 95-134 (220)
137 2fpr_A Histidine biosynthesis 95.2 0.0081 2.8E-07 60.3 2.9 40 613-652 42-96 (176)
138 2p11_A Hypothetical protein; p 95.2 0.046 1.6E-06 57.1 8.8 40 612-652 95-134 (231)
139 3ocu_A Lipoprotein E; hydrolas 95.0 0.018 6.1E-07 61.2 4.8 43 611-653 99-145 (262)
140 2kmv_A Copper-transporting ATP 94.6 0.62 2.1E-05 46.7 14.7 53 521-613 133-185 (185)
141 3nvb_A Uncharacterized protein 94.5 0.033 1.1E-06 62.6 5.7 34 616-649 259-292 (387)
142 2i33_A Acid phosphatase; HAD s 94.4 0.044 1.5E-06 58.6 6.2 43 611-653 99-144 (258)
143 2ho4_A Haloacid dehalogenase-l 94.4 0.14 4.9E-06 54.2 10.3 44 611-654 21-67 (259)
144 1yns_A E-1 enzyme; hydrolase f 94.1 0.075 2.6E-06 56.9 7.4 39 612-650 129-167 (261)
145 1ltq_A Polynucleotide kinase; 94.0 0.057 1.9E-06 59.2 6.2 32 611-642 186-217 (301)
146 4as2_A Phosphorylcholine phosp 91.9 0.087 3E-06 58.2 3.8 42 609-650 139-180 (327)
147 1yv9_A Hydrolase, haloacid deh 90.8 0.47 1.6E-05 50.4 8.2 40 615-654 23-66 (264)
148 4g9b_A Beta-PGM, beta-phosphog 90.5 0.26 8.9E-06 51.8 5.7 40 612-653 94-133 (243)
149 2b82_A APHA, class B acid phos 90.0 0.051 1.7E-06 56.2 -0.5 28 614-641 89-116 (211)
150 1zjj_A Hypothetical protein PH 89.3 2.8 9.6E-05 44.3 12.8 41 613-653 17-60 (263)
151 2obb_A Hypothetical protein; s 89.1 0.44 1.5E-05 45.4 5.5 40 614-653 25-67 (142)
152 3zvl_A Bifunctional polynucleo 85.5 1.1 3.7E-05 51.4 7.0 26 614-639 88-113 (416)
153 3i28_A Epoxide hydrolase 2; ar 84.4 0.79 2.7E-05 54.1 5.4 26 613-638 100-125 (555)
154 4fe3_A Cytosolic 5'-nucleotida 80.7 0.51 1.8E-05 51.3 1.6 34 357-391 17-59 (297)
155 2hhl_A CTD small phosphatase-l 78.2 0.7 2.4E-05 46.8 1.6 41 612-653 67-107 (195)
156 2arf_A Wilson disease ATPase; 77.7 52 0.0018 31.8 15.0 38 522-561 115-152 (165)
157 2g80_A Protein UTR4; YEL038W, 76.9 2.3 8E-05 44.8 5.3 35 612-650 124-158 (253)
158 2ght_A Carboxy-terminal domain 76.1 0.93 3.2E-05 45.3 1.8 40 613-653 55-94 (181)
159 3bwv_A Putative 5'(3')-deoxyri 72.5 6.5 0.00022 38.6 7.1 25 613-638 69-93 (180)
160 1xpj_A Hypothetical protein; s 64.9 4.7 0.00016 37.3 3.8 30 613-642 24-53 (126)
161 2i7d_A 5'(3')-deoxyribonucleot 52.3 3.4 0.00012 41.2 0.5 41 612-652 72-113 (193)
162 2jmz_A Hypothetical protein MJ 49.6 16 0.00055 36.3 5.0 36 101-136 103-138 (186)
163 2jc9_A Cytosolic purine 5'-nuc 48.5 22 0.00077 41.3 6.5 37 615-652 248-285 (555)
164 1q92_A 5(3)-deoxyribonucleotid 42.3 6.9 0.00024 39.1 0.9 40 613-652 75-115 (197)
165 2hx1_A Predicted sugar phospha 41.7 17 0.00057 38.6 3.9 47 743-789 224-281 (284)
166 3n28_A Phosphoserine phosphata 38.9 17 0.00059 39.7 3.6 49 606-654 36-95 (335)
167 2lcj_A PAB POLC intein; hydrol 37.7 33 0.0011 33.9 5.0 34 101-134 93-126 (185)
168 1ccw_A Protein (glutamate muta 37.5 1.4E+02 0.0049 27.5 9.3 81 548-652 25-113 (137)
169 1d1n_A Initiation factor 2; be 37.4 33 0.0011 30.0 4.2 36 100-135 36-98 (99)
170 2hx1_A Predicted sugar phospha 37.0 21 0.00072 37.7 3.8 43 611-653 28-73 (284)
171 3kc2_A Uncharacterized protein 34.7 22 0.00077 39.2 3.6 48 606-653 22-73 (352)
172 2crv_A IF-2MT, translation ini 32.4 52 0.0018 29.9 4.8 22 115-136 85-107 (120)
173 3gmi_A UPF0348 protein MJ0951; 27.7 2E+02 0.0068 31.5 9.6 41 599-639 49-89 (357)
174 1at0_A 17-hedgehog; developmen 24.0 1.2E+02 0.0041 28.4 6.2 29 102-130 73-103 (145)
175 2yxb_A Coenzyme B12-dependent 21.8 2.1E+02 0.0072 27.2 7.5 81 548-652 40-122 (161)
176 1nz9_A Transcription antitermi 20.7 1.1E+02 0.0038 23.6 4.2 45 118-163 4-48 (58)
177 2i2x_B MTAC, methyltransferase 20.1 1.2E+02 0.0042 31.5 5.9 79 548-652 145-224 (258)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=6.3e-109 Score=1063.51 Aligned_cols=872 Identities=19% Similarity=0.186 Sum_probs=660.1
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----c---cCCcchhhHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT-----P---VNPASTWGPLIFIFAVSAT 82 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~-----~---~~~~~~~~~l~~i~~i~~~ 82 (1104)
+|+++||+|+++..+. ++| +.|++||.++++++++++++++++.... . .+.+...++++++++++++
T Consensus 80 ~rl~~~G~N~l~~~~~~~~~----~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 80 ELLLRDGPNALRPPRGTPEY----VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHhhCCCCCCCCCCCCHH----HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHH
Confidence 5889999999998876 455 8899999999998888888887654311 0 1123334566777788999
Q ss_pred HHHHHHHHHhhhh---HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCC
Q 001304 83 KEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1104)
Q Consensus 83 ~~~~~d~~~~~~~---~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGE 159 (1104)
++++|++|+.++. +++.+++++|+|||++++|++++|||||||.|++||+|||||+|+++++ +.||||+||||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTGE 231 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTGE 231 (1034)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCCC
Confidence 9999999988764 4556789999999999999999999999999999999999999998776 88999999999
Q ss_pred CCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
|.|+.|.+.. ....|++.+|++|+||.+.+| .++|+|+
T Consensus 232 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~~f~GT~v~~G-~~~~vVv 269 (1034)
T 3ixz_A 232 SEPQTRSPEC-----------------------------------------THESPLETRNIAFFSTMCLEG-TAQGLVV 269 (1034)
T ss_pred CCCeeccCCC-----------------------------------------ccccccccccceecceeEEee-cceEEEE
Confidence 9999996421 112345678999999999998 6999999
Q ss_pred EecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhH
Q 001304 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (1104)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1104)
+||.+|.+|++.. ..+.+++|+++.+++++..+..+++++++++++++..+ ..+|...+..+
T Consensus 270 ~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 334 (1034)
T 3ixz_A 270 NTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI---------------GYTFLRAMVFF 334 (1034)
T ss_pred eehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cchHHHHHHHH
Confidence 9999999998754 45678899999999999888877776666655543221 11344544433
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEE
Q 001304 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (1104)
Q Consensus 317 ~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 396 (1104)
+.+++.+||++|+++++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 335 ---i~l~v~~iPe~Lp~~vti~la~~~~------rmak~----~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~ 401 (1034)
T 3ixz_A 335 ---MAIVVAYVPEGLLATVTVCLSLTAK------RLASK----NCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHL 401 (1034)
T ss_pred ---HHHHHheeccccHHHHHHHHHHHHH------HHhhC----CeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEE
Confidence 3478889999999998888888876 45444 4899999999999999999999999999999999999
Q ss_pred EEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCc---eeeecCCccHHHHHHHHHhcCcEE
Q 001304 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~---~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
++++..|..+....... ......++....++.++++||++.....+++. -....++|+|.|+++++.+.+...
T Consensus 402 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~ 477 (1034)
T 3ixz_A 402 WFDNHIHSADTTEDQSG----QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA 477 (1034)
T ss_pred EECCccccccCcccccc----cccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCCh
Confidence 99887665432111100 01112334566888999999998765433221 124478999999999998876432
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCC--CCcEEEEecChHHhhhhhhccC-----------Cch
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHAG-----------QQT 540 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~--~~~~~l~~KGa~e~i~~~~~~~-----------~~~ 540 (1104)
.+....|++++.+||+|+||||+++++... ++++.+|+|||||.|+++|... +..
T Consensus 478 ------------~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~ 545 (1034)
T 3ixz_A 478 ------------MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWR 545 (1034)
T ss_pred ------------HHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHH
Confidence 233456888999999999999998887542 4789999999999999999631 113
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHH
Q 001304 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (1104)
Q Consensus 541 ~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~ 620 (1104)
+.+.+.+++++.+|+|||++|||.++++++.++..... +..+.+|+||+|+|+++++||+|+++++
T Consensus 546 ~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~--------------~~~~~~e~~l~~lGlv~i~Dp~r~~~~~ 611 (1034)
T 3ixz_A 546 EAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDV--------------EAMNFPTSGLSFAGLVSMIDPPRATVPD 611 (1034)
T ss_pred HHHHHHHHHHHhcCcHhheEeEEecChhhcccccccch--------------hhhhccccCcEEEEEEeccCCCchhHHH
Confidence 55888899999999999999999998876654321100 1124568999999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+|++|+++||+|||+|||++.||.++|+++|+..++.. ...+...... ..............+++|.
T Consensus 612 aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 612 AVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSE---------TVEDIAARLR----VPVDQVNRKDARACVINGM 678 (1034)
T ss_pred HHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCch---------HHHHHHHhhC----ccchhccccccceeEEecH
Confidence 99999999999999999999999999999999765321 1111111000 0000111233456788888
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhh
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~ 780 (1104)
.+....++ .+.+....++..+|+|++|+||.++|+.+|+.|+.|+|+|||.||++||++||+||||.+++.+.++++
T Consensus 679 ~l~~~~~~---~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~a 755 (1034)
T 3ixz_A 679 QLKDMDPS---ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNA 755 (1034)
T ss_pred hhhhCCHH---HHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHh
Confidence 77655332 222232334567999999999999999999999999999999999999999999999933777778889
Q ss_pred cceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhh
Q 001304 781 ADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVS 859 (1104)
Q Consensus 781 AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~ 859 (1104)
||+|+.++++...+ .+.|||++|+|+++++.|.+++|+...++.+++.++. ...++.++|++|+|++++.+|++++
T Consensus 756 AD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal 832 (1034)
T 3ixz_A 756 ADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSL 832 (1034)
T ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998887766 3679999999999999999999998888777776653 2457999999999999999999999
Q ss_pred hccCCCCchhhccCCccccccc-cCcccCchhhHHHHH-HHHHHHHHHHHHhhhee---ec------------ccc---c
Q 001304 860 TIDKDLSEGTVMQHPQILFYCQ-AGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVY---AY------------EKS---E 919 (1104)
Q Consensus 860 ~~~~~~~~~~~~~~p~~y~~~~-~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~---~~------------~~~---~ 919 (1104)
++| ++++++|++||+ .+ .+.+++..+++..++ .++++++..++..+..+ ++ ... .
T Consensus 833 ~~e--~~~~~~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 907 (1034)
T 3ixz_A 833 AYE--KAESDIMHLRPR---NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQD 907 (1034)
T ss_pred hcC--CCChhhhhCCCC---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccc
Confidence 998 589999999994 33 567888887765443 46666655444333211 00 000 0
Q ss_pred -----------------ceeeeehhhhH---HHHHHHHhhhhcccc-ch--HHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 001304 920 -----------------MEEVSMVALSG---CIWLQAFVVALETNS-FT--VFQHLAIWGNLVAFYIINWIFSAIPSSGM 976 (1104)
Q Consensus 920 -----------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~--~~~~~~i~~sii~~~i~~~~~~~vp~~~~ 976 (1104)
..+..+.+|++ +.+++.|+++....+ |. .+.|..+|+++++.+++++++.++|..+
T Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~- 986 (1034)
T 3ixz_A 908 LQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMP- 986 (1034)
T ss_pred cccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHH-
Confidence 00123344444 444455566554332 32 3577788888888888888888888765
Q ss_pred HHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCh
Q 001304 977 YTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTYRASK 1018 (1104)
Q Consensus 977 ~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~~p~~ 1018 (1104)
.++++.+ ++.+|+.++++.++.++..++.|++.|.+.++-
T Consensus 987 --~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~ 1027 (1034)
T 3ixz_A 987 --NIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSW 1027 (1034)
T ss_pred --HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 4455544 888999999888989999999999988765443
No 2
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=2.6e-106 Score=1038.49 Aligned_cols=872 Identities=20% Similarity=0.245 Sum_probs=632.8
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-----CcchhhHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN-----PASTWGPLIFIFAVSATKEA 85 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~-----~~~~~~~l~~i~~i~~~~~~ 85 (1104)
+|+++||+|+++++|+ ++| +.|++||++++++++++++++++++.+.+.+ .+...+.++++++++++.+.
T Consensus 32 ~r~~~~G~N~l~~~~~~~~~----~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 107 (995)
T 3ar4_A 32 RHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGV 107 (995)
T ss_dssp HHHHHHCCSSCCCCCCCCHH----HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHHH
Confidence 5888999999999775 555 8999999999999999999999887654321 11112334455567788899
Q ss_pred HHHHHHhhh---hHhhcceEEEEEECCe--EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCC
Q 001304 86 WDDYNRYLS---DKKANEKEVWVVKQGI--KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1104)
Q Consensus 86 ~~d~~~~~~---~~~~n~~~~~V~r~g~--~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs 160 (1104)
++++|..++ .+++.+.+++|+|||+ .++|+++||+|||||.|++||+|||||+|++.+ .|.|+||||+|||||
T Consensus 108 ~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~--s~~l~VdeS~LTGES 185 (995)
T 3ar4_A 108 WQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGES 185 (995)
T ss_dssp HHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCEEEECHHHHCCC
T ss_pred HHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEe--eceEEEEcccccCCC
Confidence 999986553 4567788999999987 699999999999999999999999999997643 355999999999999
Q ss_pred CceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEE
Q 001304 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240 (1104)
Q Consensus 161 ~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~ 240 (1104)
.|+.|.+... .+++..+.+.+|++|+||.+.+| +++++|++
T Consensus 186 ~pv~K~~~~~--------------------------------------~~~~~~~~~~~~~v~~GT~v~~G-~~~~~V~~ 226 (995)
T 3ar4_A 186 VSVIKHTEPV--------------------------------------PDPRAVNQDKKNMLFSGTNIAAG-KALGIVAT 226 (995)
T ss_dssp SCEEECCSCC--------------------------------------CCTTCCGGGCTTEECTTCEEEEC-EEEEEEEE
T ss_pred cceecccccc--------------------------------------CCcccCcccccceEecCCEEEcc-eEEEEEEE
Confidence 9999975321 01112234778999999999998 79999999
Q ss_pred ecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhh-hH
Q 001304 241 TGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV-IP 316 (1104)
Q Consensus 241 tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 316 (1104)
||++|++|++.+ ..+.+++|+++.+++++..+..+++++++++++++..+.... ....+|...+. .+
T Consensus 227 tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 297 (995)
T 3ar4_A 227 TGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDP---------VHGGSWIRGAIYYF 297 (995)
T ss_dssp CGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSC---------SSSSCHHHHHHHHH
T ss_pred cCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------cccchHHHHHHHHH
Confidence 999999998754 567788999999999999888887777766655432111000 00112322111 12
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEE
Q 001304 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (1104)
Q Consensus 317 ~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 396 (1104)
...+.+++.++|++|+++++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 298 ~~ai~l~v~aiP~~Lp~~vt~~la~~~~------~ma~~----~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~ 367 (995)
T 3ar4_A 298 KIAVALAVAAIPEGLPAVITTCLALGTR------RMAKK----NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKM 367 (995)
T ss_dssp HHHHHHHHHHSCTTHHHHHHHHHHHHHH------HHHHT----TEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHH------HhccC----CcEeccchhhhhhcCceEEEecCCCCcccCceEEEEE
Confidence 2234477889999999888888877765 45443 4899999999999999999999999999999999999
Q ss_pred EEecEEecCC--------CCcCC-Cchhhhh---h-hccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHH
Q 001304 397 CIGGIFYGNE--------TGDAL-KDVGLLN---A-ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (1104)
Q Consensus 397 ~~~~~~~~~~--------~~~~~-~~~~~~~---~-~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~ 463 (1104)
+..+..++.. ++... ...+... . ....++.+.+++.++++||++.+...+++......+||+|.||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~ 447 (995)
T 3ar4_A 368 FIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALT 447 (995)
T ss_dssp EEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHH
T ss_pred EecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHH
Confidence 9876443310 00000 0000000 0 01123456788899999999876543222222346999999999
Q ss_pred HHHHhcCcEEEeecCcEEEEEe------CCeeEEEEEEEEeccCCCCeeEEEEEEeCCCC----cEEEEecChHHhhhhh
Q 001304 464 HAAAQLHMVLVNKNASILEIKF------NGSVLQYEILETLEFTSDRKRMSVVVKDCHSG----NISLLSKGADEAILPY 533 (1104)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~------~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~----~~~l~~KGa~e~i~~~ 533 (1104)
+++++.|+ +...... +.... ......|++++++||+|+||||||+++.++++ ++.+|+|||||.|+++
T Consensus 448 ~~a~~~g~-~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~ 525 (995)
T 3ar4_A 448 TLVEKMNV-FNTEVRN-LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDR 525 (995)
T ss_dssp HHHHHHCT-TCCCCTT-SCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHT
T ss_pred HHHHHcCC-ccccccc-cccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHh
Confidence 99998886 2111000 00000 00234689999999999999999999975321 6799999999999999
Q ss_pred hccC-----------CchhHHHHHHHHH--HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcc
Q 001304 534 AHAG-----------QQTRTFVEAVEQY--SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600 (1104)
Q Consensus 534 ~~~~-----------~~~~~~~~~~~~~--a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~ 600 (1104)
|... +..+++.++++++ +++|+|||++|||+++..+. .....+. ..++.+|+
T Consensus 526 c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~~~~-----~~~~~~e~ 590 (995)
T 3ar4_A 526 CNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVLDDS-----SRFMEYET 590 (995)
T ss_dssp EEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCTTCG-----GGHHHHTC
T ss_pred cchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc----------ccccccc-----hhhhhhcc
Confidence 9631 1134678889999 99999999999999864210 0011110 12457899
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHH
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1104)
|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.++|+++|+...+.. + +
T Consensus 591 ~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~--i---~--------------- 650 (995)
T 3ar4_A 591 DLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE--V---A--------------- 650 (995)
T ss_dssp SEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCC--C---T---------------
T ss_pred CcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCc--c---c---------------
Confidence 9999999999999999999999999999999999999999999999999999765321 0 0
Q ss_pred HHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhh
Q 001304 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMI 760 (1104)
Q Consensus 681 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml 760 (1104)
..+++|+.++.+.++ .+.++ ..+..+|||++|+||.++|+.+|+.|+.|+|+|||.||+|||
T Consensus 651 -------------~~~~~g~~~~~l~~~---~~~~~--~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~al 712 (995)
T 3ar4_A 651 -------------DRAYTGREFDDLPLA---EQREA--CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 712 (995)
T ss_dssp -------------TTEEEHHHHHTSCHH---HHHHH--HHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHH
T ss_pred -------------ceEEEchhhhhCCHH---HHHHH--HhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHH
Confidence 013344444332221 11111 235789999999999999999999999999999999999999
Q ss_pred hhcCceEEecCCchHHHhhhcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhh
Q 001304 761 QKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLF 839 (1104)
Q Consensus 761 ~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~ 839 (1104)
++||+|||| |+....++++||+++.++++.... ++.|||++|+|+++++.|.+++|+...++.+++.++.. ..++
T Consensus 713 k~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~pl 788 (995)
T 3ar4_A 713 KKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEAL 788 (995)
T ss_dssp HHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCSS
T ss_pred HHCCeEEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cchH
Confidence 999999999 644444666999999876664333 36899999999999999999999987777776665422 3568
Q ss_pred hHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhhee--eccc
Q 001304 840 NSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVY--AYEK 917 (1104)
Q Consensus 840 ~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~ 917 (1104)
.++|++|+|+++|++|++++++| ++++.+|++||. .+.+.+++.++++.|++.+++++++.++..++.+ ....
T Consensus 789 ~~~qil~~nl~~d~~p~l~l~~~--~~~~~~m~~~P~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 863 (995)
T 3ar4_A 789 IPVQLLWVNLVTDGLPATALGFN--PPDLDIMDRPPR---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDG 863 (995)
T ss_dssp CHHHHHHHHHTTTHHHHHHHTTC--CCCTTGGGSCCC---CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhhccC--CCChhHHhCCCC---CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999988887 467789999884 5567899999999999999999877654322211 1000
Q ss_pred ------------------cc----------ceeeeehhhhHHHHHH---HHhhhhccccc---hHHHHHHHHHHHHHHHH
Q 001304 918 ------------------SE----------MEEVSMVALSGCIWLQ---AFVVALETNSF---TVFQHLAIWGNLVAFYI 963 (1104)
Q Consensus 918 ------------------~~----------~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~i~~sii~~~i 963 (1104)
.. ....+++.|++.++++ .++++....++ ..+.+..++.++++.++
T Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~ 943 (995)
T 3ar4_A 864 PGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMS 943 (995)
T ss_dssp CCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHH
T ss_pred cccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHH
Confidence 00 0012334444444444 44454433322 22445555655566656
Q ss_pred HHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 964 INWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 964 ~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
+++++.++|..+ .++.+.. ++.+|+.++++.+++++...+.|++.|.|
T Consensus 944 l~~~~~~~p~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 944 LHFLILYVDPLP---MIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHSTHHH---HHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH---HhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 666666777543 3454433 88899999998999999999999987755
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=3.4e-107 Score=1045.34 Aligned_cols=866 Identities=20% Similarity=0.231 Sum_probs=641.4
Q ss_pred ccccCCCCceeecCC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccc----c----CCcchhhHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP----V----NPASTWGPLIFIFAVSAT 82 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~----~----~~~~~~~~l~~i~~i~~~ 82 (1104)
+|+++||+|+++.++ .++| +.|++||.++++++++++++++++..... . +.+...++++++++++++
T Consensus 75 ~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 75 EILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence 588899999999875 4665 78999999999999988888887643110 0 112233566777888999
Q ss_pred HHHHHHHHHhhhh---HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCC
Q 001304 83 KEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1104)
Q Consensus 83 ~~~~~d~~~~~~~---~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGE 159 (1104)
.+++|++|+.++. +++.+.+|+|+|||++++|++++|+|||||.|++||+|||||+|+++++ |+||||+||||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGE 226 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGE 226 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCCC
Confidence 9999998876654 5567889999999999999999999999999999999999999997654 99999999999
Q ss_pred CCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
|.|+.|.+.. ....|++..|++|+||.+.+| +++|+|+
T Consensus 227 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~v~~GT~v~~G-~~~~~V~ 264 (1028)
T 2zxe_A 227 SEPQTRSPEF-----------------------------------------SSENPLETRNIAFFSTNCVEG-TARGVVV 264 (1028)
T ss_dssp CSCEECCSSC-----------------------------------------CCSSTTTCSSEECTTCEEEEE-EEEEEEE
T ss_pred CcceecccCC-----------------------------------------CCCCcccccceEEeCceEEcc-eEEEEEE
Confidence 9999996431 011255788999999999998 7999999
Q ss_pred EecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhH
Q 001304 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (1104)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1104)
+||++|++|++.+ .++.+++++++.+++++.+++.+++++++++++++. |. ..+|...+..+
T Consensus 265 ~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~--------------~~~~~~~~~~~ 329 (1028)
T 2zxe_A 265 YTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-IL--------------GYSWLEAVIFL 329 (1028)
T ss_dssp ECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT--------------TCCHHHHHHHH
T ss_pred EeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc--------------cCcHHHHHHHH
Confidence 9999999998654 567788999999999999988888777776665532 11 11344444433
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEE
Q 001304 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (1104)
Q Consensus 317 ~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 396 (1104)
++ +++.+||++|+++++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 330 i~---llv~~iP~~Lp~~vti~l~~~~~------~mak~----~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 396 (1028)
T 2zxe_A 330 IG---IIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 396 (1028)
T ss_dssp HH---HHHHHSCTTHHHHHHHHHHHHHH------HHHTT----TEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEE
T ss_pred HH---HHHHHcCchHHHHHHHHHHHHHH------HHhhC----CceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEE
Confidence 33 66778999999999988888876 45443 4899999999999999999999999999999999999
Q ss_pred EEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCc---eeeecCCccHHHHHHHHHhcCcEE
Q 001304 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~---~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
++++..|..+..+.... ......++...+++.++++||++..+...++. -.+..+||+|.||++++++.+...
T Consensus 397 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~ 472 (1028)
T 2zxe_A 397 WFDNQIHEADTTENQSG----AAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV 472 (1028)
T ss_dssp EETTEEEECCCCTTCCS----CCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH
T ss_pred EECCeeeeccCCCCccc----cccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCH
Confidence 99887664321110000 00111234456788899999998765432211 113468999999999998763211
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeC--CCCcEEEEecChHHhhhhhhccC-----------Cch
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHAG-----------QQT 540 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~--~~~~~~l~~KGa~e~i~~~~~~~-----------~~~ 540 (1104)
.+.+..|++++.+||+|+||||+++++.+ .++++++|+|||||.|+++|... +.+
T Consensus 473 ------------~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~ 540 (1028)
T 2zxe_A 473 ------------QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMK 540 (1028)
T ss_dssp ------------HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHH
T ss_pred ------------HHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHH
Confidence 11233577889999999999999999864 25788999999999999999731 113
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHH
Q 001304 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (1104)
Q Consensus 541 ~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~ 620 (1104)
+.+.+++++++++|+|||++|||+++++++.++. .. +++ ..+.+|+|++|+|+++++||+|+++++
T Consensus 541 ~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~ 606 (1028)
T 2zxe_A 541 EAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------PF-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPD 606 (1028)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------CC-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------cc-chh-----hhhhhhcCeEEEeeeccCCCCChhHHH
Confidence 4678889999999999999999999765432210 00 000 012357899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccc-cCCCCCceEEEEcc
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRI-TTSEPKDVAFVVDG 699 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~g 699 (1104)
+|++|+++||++||+|||++.||.++|++|||...+.. ...+.... . .... ..........+++|
T Consensus 607 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~----~-~~~~~~~~~~~~~~~vi~G 672 (1028)
T 2zxe_A 607 AVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE---------TIEDIAAR----L-NIPIGQVNPRDAKACVVHG 672 (1028)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCC---------CHHHHHHH----T-TCCGGGSCGGGCCEEEEEH
T ss_pred HHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCch---------hHHHHHhh----c-CcchhhccccccceEEEEc
Confidence 99999999999999999999999999999999765432 11111110 0 0000 01112234678888
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecC-CchHHHh
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAA 778 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g-~~~~~a~ 778 (1104)
..+....++ .+.++...+...+|||++|+||..+|+.+|+.|+.|+|+|||.||+|||++||||||| | +..+.++
T Consensus 673 ~~l~~~~~~---~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm-g~~gtd~ak 748 (1028)
T 2zxe_A 673 SDLKDLSTE---VLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GISGSDVSK 748 (1028)
T ss_dssp HHHTTCCHH---HHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-SSSCCHHHH
T ss_pred HHhhhCCHH---HHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe-CCccCHHHH
Confidence 877654332 2233333344579999999999999999999999999999999999999999999999 6 4444466
Q ss_pred hhcceecccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhh
Q 001304 779 RAADYSIGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPV 856 (1104)
Q Consensus 779 ~~AD~vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~ 856 (1104)
++||+++.++++ +..+ +.|||++|.|+++++.|.+++|+...++.+++.++.. ..+++++|++|+|++++.+|+
T Consensus 749 ~aAD~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa 824 (1028)
T 2zxe_A 749 QAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPA 824 (1028)
T ss_dssp HHCSEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHH
T ss_pred HhcCEEecCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---cchhHHHHHHHHHHHHHHHHH
Confidence 799999987555 4554 6999999999999999999999987766666655422 356899999999999999999
Q ss_pred hhhhccCCCCchhhccCCccccccccCcccCchhhHH-HHHHHHHHHHHHHHHhhheee---c------------cc---
Q 001304 857 LVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAG-WFGRSLFHAIVAFVISIHVYA---Y------------EK--- 917 (1104)
Q Consensus 857 ~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~---~------------~~--- 917 (1104)
+++++|+ +++.+|++||+ ..+.+.+++.++++. ++..+++++++.|+..+..+. . ..
T Consensus 825 ~al~~e~--~~~~~m~~~Pr--~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 900 (1028)
T 2zxe_A 825 ISLAYEQ--AESDIMKRQPR--NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWI 900 (1028)
T ss_dssp HHGGGCC--CSSCGGGSCCC--CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTC
T ss_pred HHhccCc--cchhhhccCCC--CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccc
Confidence 9999985 67889999884 223348899888776 456788988777655433211 0 00
Q ss_pred c------cc-----------eeeeehhhhHHHHHH---HHhhhhcccc-chH-HHHHHHHHHHHHHHHHHHHHhhcCCch
Q 001304 918 S------EM-----------EEVSMVALSGCIWLQ---AFVVALETNS-FTV-FQHLAIWGNLVAFYIINWIFSAIPSSG 975 (1104)
Q Consensus 918 ~------~~-----------~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~-~~~~~i~~sii~~~i~~~~~~~vp~~~ 975 (1104)
. +. ....+.+|+++++++ .++++....+ |.. +.+..++.++++.+++++++.++|..+
T Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~ 980 (1028)
T 2zxe_A 901 SDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTD 980 (1028)
T ss_dssp CCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHH
T ss_pred cccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 0 00 012344555555554 4455543322 211 345666666677777777778888654
Q ss_pred hHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 976 MYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 976 ~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
.++.+.+ ++.+|+.++.+.++.++...+.|++.|.+
T Consensus 981 ---~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 981 ---VALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp ---HHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---hhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3455443 88899888877888888888888877654
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=1.2e-97 Score=930.86 Aligned_cols=762 Identities=16% Similarity=0.200 Sum_probs=544.2
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~ 91 (1104)
+|+++||+|+++++++++| +.|++||.+++++++++.++++++.. .+.....++++++++++.++++++++
T Consensus 95 ~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~g-----~~~~~~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 95 QRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGLE-----DWVDFGVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTCS-----CSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999998888877 67899999999877777777766532 23334455667778899999999998
Q ss_pred hhhhHh---hcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecc
Q 001304 92 YLSDKK---ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1104)
Q Consensus 92 ~~~~~~---~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1104)
.++.+. +.+.+++|+|||++++|++++|+|||||.|++||+|||||+|+++++ .+.||||+|||||.|+.|
T Consensus 166 ~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K--- 239 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDK--- 239 (920)
T ss_dssp HHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEEC---
T ss_pred HHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCc---eeeeeccccCCCCcceEe---
Confidence 876554 45678999999999999999999999999999999999999996541 279999999999999999
Q ss_pred ccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccc
Q 001304 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248 (1104)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~ 248 (1104)
..+|.+|+||.+.+| +++++|++||.+|.+|
T Consensus 240 ------------------------------------------------~~gd~v~sGT~v~~G-~~~~~V~~tG~~T~~g 270 (920)
T 1mhs_A 240 ------------------------------------------------HKGDQVFASSAVKRG-EAFVVITATGDNTFVG 270 (920)
T ss_dssp ------------------------------------------------CSSCEECSCBCCSCC-CEEEEEEECSTTCSTT
T ss_pred ------------------------------------------------cCCCeeecCceEecc-eEEEEEEEeCCcCHHH
Confidence 345789999999998 7999999999999999
Q ss_pred cccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhc
Q 001304 249 MTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSI 325 (1104)
Q Consensus 249 ~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (1104)
++.+ ..+.+++++++.++++..+++++++++++++++.++ + ...++...+..++ .+++.
T Consensus 271 ~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~-~--------------~~~~~~~~l~~av---~llV~ 332 (920)
T 1mhs_A 271 RAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF-Y--------------RSNPIVQILEFTL---AITII 332 (920)
T ss_dssp TTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-T--------------TTCCHHHHHHHHH---HHHHH
T ss_pred HHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h--------------cCCcHHHHHHHHH---HHHHH
Confidence 9765 455678999999999998877766665555443321 1 1123444444333 36778
Q ss_pred cccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecC
Q 001304 326 MIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 405 (1104)
Q Consensus 326 ~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 405 (1104)
++|++|++.+.++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|++++..+. +
T Consensus 333 aiP~aLp~~vti~la~g~~------~mak~----~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~-- 399 (920)
T 1mhs_A 333 GVPVGLPAVVTTTMAVGAA------YLAKK----KAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-V-- 399 (920)
T ss_dssp HSCCCHHHHHHHHHHHHHH------HHHHT----TCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-C--
T ss_pred hCchhHHHHHHHHHHHHHH------HHHhC----CeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-C--
Confidence 9999999877777766665 34333 488999999999999999999999999999999988753210 0
Q ss_pred CCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEe
Q 001304 406 ETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485 (1104)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 485 (1104)
++ .+++.+.++|+... .+ .+||+|.|+++++++.+..
T Consensus 400 ------------------~~--~~ll~~a~l~~~~~----~~------~~~P~e~Al~~~~~~~~~~------------- 436 (920)
T 1mhs_A 400 ------------------DP--EDLMLTACLAASRK----KK------GIDAIDKAFLKSLKYYPRA------------- 436 (920)
T ss_dssp ------------------CC--THHHHHHHHSCCCS----SC------SCCSHHHHHHHHHHHSSSC-------------
T ss_pred ------------------CH--HHHHHHHHHhcCCc----cc------CCChHHHHHHHHHHhcccc-------------
Confidence 00 13456667777532 11 2499999999999876531
Q ss_pred CCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC-----chhHHHHHHHHHHhccceEEEE
Q 001304 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-----QTRTFVEAVEQYSQLGLRTLCL 560 (1104)
Q Consensus 486 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~-----~~~~~~~~~~~~a~~GlR~l~~ 560 (1104)
.+....|++++.+||+|.||+|+++++.+ +|+.++++||||+.|+++|.... ..+.+.+++++++.+|+||+++
T Consensus 437 ~~~~~~~~~~~~~pF~s~~k~ms~iv~~~-~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~v 515 (920)
T 1mhs_A 437 KSVLSKYKVLQFHPFDPVSKKVVAVVESP-QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGV 515 (920)
T ss_dssp CGGGSCCCEEEEEEEETTTTEEEEEECCS-SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEE
T ss_pred hhhccccceeEEeeccCCCCeEEEEEEeC-CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 11224577889999999999999999865 57788999999999999997532 1345778899999999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 561 AWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 561 A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
|+|.. |++++|+|+++++||+|++++++|+.|+++||+++|+|||++
T Consensus 516 A~~~~---------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~ 562 (920)
T 1mhs_A 516 ARKRG---------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAV 562 (920)
T ss_dssp CCCSS---------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCH
T ss_pred EEecc---------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCH
Confidence 98731 378999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhc
Q 001304 641 NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720 (1104)
Q Consensus 641 ~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~ 720 (1104)
.||.+||+++||.....+..-..++|... ++++. +. ....
T Consensus 563 ~TA~aIA~~lGI~~~~~~~~~~~~~g~~~---------------------------~~~~e-----------l~--~~~~ 602 (920)
T 1mhs_A 563 GIARETSRQLGLGTNIYNAERLGLGGGGD---------------------------MPGSE-----------VY--DFVE 602 (920)
T ss_dssp HHHHHHHHHHTSSCSCCCSSSSSSCBCCC---------------------------GGGGG-----------GG--TTTT
T ss_pred HHHHHHHHHcCCCccccCccceeecCccc---------------------------CCHHH-----------HH--HHHh
Confidence 99999999999964210000001111100 01111 11 1134
Q ss_pred cceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHH-HHhhh
Q 001304 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHG 799 (1104)
Q Consensus 721 ~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l-ll~~G 799 (1104)
+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||| |+....++++||+++.++++-... .+.+|
T Consensus 603 ~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADiVl~~~~~~~I~~ai~~g 681 (920)
T 1mhs_A 603 AADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV-EGSSDAARSAADIVFLAPGLGAIIDALKTS 681 (920)
T ss_dssp TTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE-TTSCHHHHHSSSEEESSCCSHHHHHHHHHH
T ss_pred hCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc-ccccHHHHHhcCeEEcCCCHHHHHHHHHHH
Confidence 5679999999999999999999999999999999999999999999999 654344555999999876664333 36999
Q ss_pred hhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccc
Q 001304 800 RYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFY 879 (1104)
Q Consensus 800 R~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~ 879 (1104)
|++|+|+++++.|.++.|+.......++.. +.|.+ +++.+++|.|++.+. |++++++|+ ++.. +.|..+.
T Consensus 682 R~~~~ni~k~i~~~l~~n~~~~~~~~~~~~---~~~~~-l~~~~il~~~l~~d~-~~lal~~e~--~~~~--~~P~~~~- 751 (920)
T 1mhs_A 682 RQIFHRMYAYVVYRIALSIHLEIFLGLWIA---ILNRS-LNIELVVFIAIFADV-ATLAIAYDN--APYS--QTPVKWN- 751 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---SCSCC-CCHHHHHHHHHHHTT-HHHHCCCCC--SGGG--GSCCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcc-CCHHHHHHHHHHHHH-HhhhhcccC--cccc--cCCCCch-
Confidence 999999999999999998875433222222 23434 678899999988886 889888885 2222 3333221
Q ss_pred cccCcccCchhhHHHHHHHHHHHHHHHHHhhheeecc-cc----cceeeeehhhhHHHHHHHH---hhhhccccchHHHH
Q 001304 880 CQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE-KS----EMEEVSMVALSGCIWLQAF---VVALETNSFTVFQH 951 (1104)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 951 (1104)
. ...++..+..+++.++..++..+..+... .. .....++.+|...++++.+ +++.....|....+
T Consensus 752 --~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~ 824 (920)
T 1mhs_A 752 --L-----PKLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPS 824 (920)
T ss_dssp --S-----SSCSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCT
T ss_pred --H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchH
Confidence 1 22222233445554443322221111110 00 1112345556555555544 44443333332234
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHH
Q 001304 952 LAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYF 1010 (1104)
Q Consensus 952 ~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~ 1010 (1104)
+.+++++++..+++..+.++|. +.+.+ ++..|+.++++.++.++...+.|++
T Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~-------f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 877 (920)
T 1mhs_A 825 WQLSGAIFLVDILATCFTIWGW-------FEHSDTSIVAVVRIWIFSFGIFCIMGGVYYI 877 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSS-------TTSCSHHHHTHHHHHHHTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhhh-------hccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445544444444444444442 22211 5556666655555555555555543
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=8.7e-96 Score=915.85 Aligned_cols=678 Identities=18% Similarity=0.206 Sum_probs=500.4
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cCCcchhhHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--VNPASTWGPLIFIFAVSATKEAWDDY 89 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~--~~~~~~~~~l~~i~~i~~~~~~~~d~ 89 (1104)
+|+++||+|+++.+++++| +.|++||.+++++++++.++++++..... ...+...+.++++++++++.++++++
T Consensus 40 ~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ 115 (885)
T 3b8c_A 40 DRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEEN 115 (885)
T ss_dssp HHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTT
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999887776 56788999999877777777777653211 01222334455556677788899998
Q ss_pred HHhhhh---HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEee
Q 001304 90 NRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1104)
Q Consensus 90 ~~~~~~---~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1104)
|+.++. +++.+.+++|+|||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 116 ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~K~ 191 (885)
T 3b8c_A 116 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVTKH 191 (885)
T ss_dssp TTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCCBS
T ss_pred HHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcceEec
Confidence 877654 4456788999999999999999999999999999999999999996553 689999999999999983
Q ss_pred ccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccc
Q 001304 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1104)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1104)
.+|.+|+||.+.+| +++++|++||.+|.
T Consensus 192 ---------------------------------------------------~g~~v~~GT~v~~G-~~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 192 ---------------------------------------------------PGQEVFSGSTCKQG-EIEAVVIATGVHTF 219 (885)
T ss_dssp ---------------------------------------------------SCCCCCSCCCCCSC-CCCCBCCSCTTTTT
T ss_pred ---------------------------------------------------CCCccccCeEEeee-EEEEEEEEcCcccH
Confidence 35789999999998 79999999999999
Q ss_pred cccccCC--CCCCcChHHHHHHHHHHHHHHHH-HHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhh
Q 001304 247 LGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQ-IVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (1104)
Q Consensus 247 ~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1104)
+|++.+. ...+++++++.+++++.+++..+ +.+++++++.++ +. ..++...+.. ++.++
T Consensus 220 ~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~---~v~ll 281 (885)
T 3b8c_A 220 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYP-IQ--------------RRKYRDGIDN---LLVLL 281 (885)
T ss_dssp STTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTT-TT--------------CSCSTTHHHH---HHHHT
T ss_pred HHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc--------------cCcHHHHHHH---HHHHH
Confidence 9997652 24678999999999887643322 222222222211 10 1123344433 34478
Q ss_pred hccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEe
Q 001304 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY 403 (1104)
Q Consensus 324 ~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 403 (1104)
+.++|++||+.++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|.++.+. .+
T Consensus 282 v~aiP~aLp~~vti~la~g~~------r~ak~----~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~ 349 (885)
T 3b8c_A 282 IGGIPIAMPTVLSVTMAIGSH------RLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF 349 (885)
T ss_dssp TTTCCSSTTTHHHHTTTHHHH------HHTTT----SCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS
T ss_pred HHHhhhHHHHHHHHHHHHHHH------HHHhC----CeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc
Confidence 899999998777766665554 55544 4899999999999999999999999999999999643210 00
Q ss_pred cCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEE
Q 001304 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483 (1104)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~ 483 (1104)
.. ..+..+++...++|+... .+||.|.|+++++.+..
T Consensus 350 ~~------------------~~~~~~ll~~aa~~~~~~------------~~~p~~~Al~~~~~~~~------------- 386 (885)
T 3b8c_A 350 CK------------------GVEKDQVLLFAAMASRVE------------NQDAIDAAMVGMLADPK------------- 386 (885)
T ss_dssp CS------------------STTHHHHHHHHHHHCCSS------------SCCSHHHHHHHTTCCTT-------------
T ss_pred CC------------------CCCHHHHHHHHHHHhCCC------------CCCchHHHHHHHhhchh-------------
Confidence 00 011235667778887532 47999999999875311
Q ss_pred EeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC-CchhHHHHHHHHHHhccceEEEEEE
Q 001304 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-QQTRTFVEAVEQYSQLGLRTLCLAW 562 (1104)
Q Consensus 484 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~a~~GlR~l~~A~ 562 (1104)
.....|++++.+||+|.||||+++++.. +|+.++++|||||.++++|... ..++++.+++++++++|+||+++|+
T Consensus 387 ---~~~~~~~~~~~~pF~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~ 462 (885)
T 3b8c_A 387 ---EARAGIREVHFLPFNPVDKRTALTYIDG-SGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVAR 462 (885)
T ss_dssp ---CCCCSSCCBCCCCCCTTTCCCCCBBCSS-SSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECC
T ss_pred ---hHhhcCceeecccCCcccceEEEEEEec-CCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEE
Confidence 1123456778899999999999998864 5778899999999999999743 3356788899999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 563 REVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 563 k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
|++++++. +..|+|++|+|+++++||+|++++++|+.|+++||+++|+|||+..|
T Consensus 463 ~~~~~~~~-------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~t 517 (885)
T 3b8c_A 463 QVVPEKTK-------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 517 (885)
T ss_dssp BCCCSSSS-------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHH
T ss_pred eccccccc-------------------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHH
Confidence 98865321 24578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccc
Q 001304 643 AIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRT 722 (1104)
Q Consensus 643 a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~ 722 (1104)
|.++|+++||........ .+.|.+.++. +++..++.. ..+.
T Consensus 518 A~~iA~~lGi~~~~~~~~--~l~g~~~~~~------------------------~~~~~l~~~-------------~~~~ 558 (885)
T 3b8c_A 518 GKETGRRLGMGTNMYPSS--ALLGTHKDAN------------------------LASIPVEEL-------------IEKA 558 (885)
T ss_dssp HTHHHHTTTCTTCCSTTS--SCCBGGGGTT------------------------SCCSCHHHH-------------HHTS
T ss_pred HHHHHHHhCCccccCCcc--eeeccccccc------------------------cchhHHHHH-------------HhhC
Confidence 999999999964311000 1112111100 011111111 2346
Q ss_pred eeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHH-HHhhhhh
Q 001304 723 AICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRY 801 (1104)
Q Consensus 723 ~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l-ll~~GR~ 801 (1104)
.+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||| |+....++++||+++.++++-... .+.+||+
T Consensus 559 ~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADivl~~~~~~~I~~ai~~gR~ 637 (885)
T 3b8c_A 559 DGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIISAVLTSRA 637 (885)
T ss_dssp CCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC-SSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHH
T ss_pred cEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe-CCccHHHHHhcceeeccCchhHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999 654344455999999987764433 4689999
Q ss_pred hhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccccc
Q 001304 802 SYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQ 881 (1104)
Q Consensus 802 ~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~ 881 (1104)
+|+|+++.+.|.+..|+...+..++..+ ++ ..++.+++++|+|++.+..+ +.+.+|+ .++. +.|.
T Consensus 638 ~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~--~~~l~p~~il~i~l~~d~~~-l~l~~~~--~~~~--~~p~------ 702 (885)
T 3b8c_A 638 IFQRMKNYTIYAVSITIRIVFGFMLIAL--IW--EFDFSAFMVLIIAILNDGTI-MTISKDR--VKPS--PTPD------ 702 (885)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSTTHHHHS--SC--SSCSCHHHHHHHHHHHHTTT-CCCCCCC--CCCS--SCCC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc--CcCcCHHHHHHHHHHHHHHH-Hhhcccc--cCcc--cCCc------
Confidence 9999999999999887743222222222 11 23578999999999999876 6666664 2211 1221
Q ss_pred cCcccCchhhHHHHHHHHHHHHHHHHH
Q 001304 882 AGRLLNPSTFAGWFGRSLFHAIVAFVI 908 (1104)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~v~~~~ 908 (1104)
+......++..+..+++.+++.+++
T Consensus 703 --~~~~~~~~~~~~~~g~~~~~~~~~~ 727 (885)
T 3b8c_A 703 --SWKLKEIFATGVVLGGYQAIMTVIF 727 (885)
T ss_dssp --STTTTTTTTTHHHHHSSTHHHHTTS
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112334555556677776665543
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=3.8e-68 Score=653.97 Aligned_cols=493 Identities=18% Similarity=0.211 Sum_probs=392.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh------HhhcceEEEEEE-CCeEEEEeccCCccceEEEEecCCcccceEEEEeccC
Q 001304 72 PLIFIFAVSATKEAWDDYNRYLSD------KKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSD 144 (1104)
Q Consensus 72 ~l~~i~~i~~~~~~~~d~~~~~~~------~~~n~~~~~V~r-~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~ 144 (1104)
...+++++..+..++|++.++|+. .++.+++++|+| ||++++|++++|+|||+|+|++||+|||||+|+
T Consensus 190 ~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl---- 265 (736)
T 3rfu_A 190 AAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQ---- 265 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEEC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEE----
Confidence 344555666677788888876643 344678999998 999999999999999999999999999999999
Q ss_pred CCccEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeee
Q 001304 145 PQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQ 224 (1104)
Q Consensus 145 ~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~ 224 (1104)
+|.++||||+|||||.|+.|. .++.+++
T Consensus 266 -~G~~~VDES~LTGES~Pv~K~---------------------------------------------------~gd~v~~ 293 (736)
T 3rfu_A 266 -EGRSFVDESMVTGEPIPVAKE---------------------------------------------------ASAKVIG 293 (736)
T ss_dssp -SSCEEEECSSSTTCSSCEEEC---------------------------------------------------TTCEECT
T ss_pred -ECceEeeecccCCccccEEec---------------------------------------------------cCCcCCC
Confidence 778999999999999999993 3567999
Q ss_pred cceeccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceee
Q 001304 225 SCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301 (1104)
Q Consensus 225 Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 301 (1104)
||.+.+| ++++.|++||.+|.++++.+ .++.+++++++.+++++.++++++++++++++++++++..
T Consensus 294 Gt~~~~G-~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~--------- 363 (736)
T 3rfu_A 294 ATINQTG-SFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP--------- 363 (736)
T ss_dssp TCEEESC-CCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---------
T ss_pred ceEeccc-eEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 9999988 79999999999999988754 4566789999999999999988888888777665433211
Q ss_pred ccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEec
Q 001304 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTD 381 (1104)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~D 381 (1104)
...+...+..+ +.+++.++|++|++++.++...... ++.+ .++++|+++.+|+||++|+||||
T Consensus 364 ----~~~~~~~l~~a---i~vlviacPcaL~la~p~a~~~~~~------~~a~----~gilvk~~~alE~l~~v~~i~fD 426 (736)
T 3rfu_A 364 ----QPALSYGLIAA---VSVLIIACPCALGLATPMSIMVGVG------KGAQ----SGVLIKNAEALERMEKVNTLVVD 426 (736)
T ss_dssp ----SSSTTHHHHHH---HHHHHHHCCSTHHHHHHHHHHHHHH------HHHH----TTEEESCHHHHHHHTSCCEEEEC
T ss_pred ----CchHHHHHHHH---HHhHHHhhhhHHHHHHHHHHHHHHH------HHhh----cceeechHHHHHHhcCCCEEEEe
Confidence 11233334333 3467788999998777777666654 3332 35999999999999999999999
Q ss_pred CCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHH
Q 001304 382 KTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEA 461 (1104)
Q Consensus 382 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~A 461 (1104)
||||||+|+|+|.+++.++. . ..+++...+.+ . +.++||.+.|
T Consensus 427 KTGTLT~g~~~v~~i~~~~~----------~--------------~~~~l~~aa~l---e----------~~s~hPla~A 469 (736)
T 3rfu_A 427 KTGTLTEGHPKLTRIVTDDF----------V--------------EDNALALAAAL---E----------HQSEHPLANA 469 (736)
T ss_dssp CBTTTBCSSCEEEEEEESSS----------C--------------HHHHHHHHHHH---H----------HSSCCHHHHH
T ss_pred CCCCCcCCceEEEEEEecCC----------C--------------HHHHHHHHHHH---h----------hcCCChHHHH
Confidence 99999999999999873221 0 01122211111 1 2367999999
Q ss_pred HHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchh
Q 001304 462 LVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTR 541 (1104)
Q Consensus 462 l~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~ 541 (1104)
+++++++.|+.+. ...+|++.+++... ... +|+. +.+|+++.+.+... ...
T Consensus 470 iv~~a~~~~~~~~---------------------~~~~f~~~~g~gv~-~~~--~g~~--~~~G~~~~~~~~~~---~~~ 520 (736)
T 3rfu_A 470 IVHAAKEKGLSLG---------------------SVEAFEAPTGKGVV-GQV--DGHH--VAIGNARLMQEHGG---DNA 520 (736)
T ss_dssp HHHHHHTTCCCCC---------------------CCSCCCCCTTTEEE-ECS--SSSC--EEEESHHHHHHHCC---CCH
T ss_pred HHHHHHhcCCCcc---------------------CcccccccCCceEE-EEE--CCEE--EEEcCHHHHHHcCC---Chh
Confidence 9999998775431 23467776665432 221 3332 45699987765432 235
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHH
Q 001304 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPET 621 (1104)
Q Consensus 542 ~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~ 621 (1104)
.+.+..++++.+|+|++++| .|.+++|+++++|++|++++++
T Consensus 521 ~~~~~~~~~~~~G~~vl~va--------------------------------------~d~~~~G~i~i~D~i~~~~~~a 562 (736)
T 3rfu_A 521 PLFEKADELRGKGASVMFMA--------------------------------------VDGKTVALLVVEDPIKSSTPET 562 (736)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEECCBCSSHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEeeccchhhHHHH
Confidence 67788999999999999999 4678999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchh
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 701 (1104)
|++|+++|++++|+|||+..+|..+|+++|+
T Consensus 563 I~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi------------------------------------------------- 593 (736)
T 3rfu_A 563 ILELQQSGIEIVMLTGDSKRTAEAVAGTLGI------------------------------------------------- 593 (736)
T ss_dssp HHHHHHHTCEEEEECSSCHHHHHHHHHHHTC-------------------------------------------------
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-------------------------------------------------
Confidence 9999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhc
Q 001304 702 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781 (1104)
Q Consensus 702 l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~A 781 (1104)
..++++++|++|.++|+.+++.|+.|+|+|||.||+|||++||||||| |+..+.++++|
T Consensus 594 --------------------~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAm-g~g~d~a~~~A 652 (736)
T 3rfu_A 594 --------------------KKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAM-GTGTDVAIESA 652 (736)
T ss_dssp --------------------CCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEE-SSSCSHHHHHC
T ss_pred --------------------CEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEe-CCccHHHHHhC
Confidence 247789999999999999999999999999999999999999999999 77666677799
Q ss_pred ceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 782 DYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 782 D~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
|+++.+.++-... .+.+||.+++|+++.+.|.+.+|++..
T Consensus 653 D~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~i 693 (736)
T 3rfu_A 653 GVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGV 693 (736)
T ss_dssp SEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999865553333 368999999999999999999998643
No 7
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1.6e-66 Score=636.43 Aligned_cols=485 Identities=17% Similarity=0.214 Sum_probs=385.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCC
Q 001304 73 LIFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~ 146 (1104)
.++++++..+.+++|++.++|+ ..++.+++++|+|||++++|+++||+|||+|+|++||+|||||+|+ +
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~ 173 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----E 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----E
Confidence 3444445566778888887664 3456788999999999999999999999999999999999999999 5
Q ss_pred ccEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecc
Q 001304 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (1104)
Q Consensus 147 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt 226 (1104)
|.++||||+|||||.|+.| ..++.+++||
T Consensus 174 G~~~VdeS~LTGES~Pv~K---------------------------------------------------~~g~~v~~Gt 202 (645)
T 3j08_A 174 GESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGAT 202 (645)
T ss_dssp CCEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTC
T ss_pred CcEEEEcccccCCCCceec---------------------------------------------------CCCCEeeccE
Confidence 7799999999999999999 3457899999
Q ss_pred eeccCceEEEEEEEecCcccccccc---CCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeecc
Q 001304 227 YLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (1104)
Q Consensus 227 ~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (1104)
.+.+| +++++|++||.+|.++++. ...+.+++++++.+++++.++++++++++++.++.++++.
T Consensus 203 ~~~~g-~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~------------ 269 (645)
T 3j08_A 203 INNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------------ 269 (645)
T ss_dssp EECSS-CEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC------------
T ss_pred EEecC-cEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 99988 7999999999999888764 4667788999999999999988888877777766543321
Q ss_pred CCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCC
Q 001304 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (1104)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKT 383 (1104)
..++...+..++ .+++.++|++|++++.++...+.. ++.+ .++++|+++.+|+||++++||||||
T Consensus 270 --~~~~~~~~~~~i---~vlvia~P~aL~la~p~a~~~~~~------~~a~----~gilvk~~~~lE~lg~v~~i~fDKT 334 (645)
T 3j08_A 270 --HAPLLFAFTTLI---AVLVVACPCAFGLATPTALTVGMG------KGAE----LGILIKNADALEVAEKVTAVIFDKT 334 (645)
T ss_dssp --SCSCCCTTTTTH---HHHHHHSCTTHHHHHHHHHHHHHH------HHHT----TCCCCSSTTHHHHGGGCCEEEEEGG
T ss_pred --CCcHHHHHHHHH---HHHHHHhhhHHHHHHHHHHHHHHH------HHHH----CCeEecCchHHHHhhCCCEEEEcCc
Confidence 112333333333 367788999998887777766654 3332 3589999999999999999999999
Q ss_pred CCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHH
Q 001304 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (1104)
Q Consensus 384 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~ 463 (1104)
||||+|+|+|.+++..+. +..+++...+.|+ ..++||++.|++
T Consensus 335 GTLT~~~~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hPla~Aiv 377 (645)
T 3j08_A 335 GTLTKGKPEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIV 377 (645)
T ss_dssp GTSSSSCCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHH
T ss_pred ccccCCCeEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------hcCCChhHHHHH
Confidence 999999999999876431 1123444444443 225799999999
Q ss_pred HHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHH
Q 001304 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (1104)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (1104)
+++++.|+......+ ++ ..+ .+.... ..+.+|+++.+.+... ..++.+
T Consensus 378 ~~a~~~g~~~~~~~~-------------~~---~~~----g~g~~~----------~~v~~g~~~~~~~~~~--~~~~~~ 425 (645)
T 3j08_A 378 KKALEHGIELGEPEK-------------VE---VIA----GEGVVA----------DGILVGNKRLMEDFGV--AVSNEV 425 (645)
T ss_dssp HHHHHTTCCCCSCCC-------------CE---EET----TTEEEE----------TTEEEECHHHHHHTTC--CCCHHH
T ss_pred HHHHhcCCCcCCccc-------------eE---Eec----CCceEE----------EEEEECCHHHHHhcCC--CccHHH
Confidence 999988865321111 00 000 000000 1155688776654322 224668
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHH
Q 001304 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (1104)
Q Consensus 544 ~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~ 623 (1104)
.+.+++++.+|+|++++| .|++++|+++++|++|++++++|+
T Consensus 426 ~~~~~~~~~~g~~~l~va--------------------------------------~~~~~~G~i~~~D~l~~~~~~~i~ 467 (645)
T 3j08_A 426 ELALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQ 467 (645)
T ss_dssp HHHHHHHHTTTCCCEEEE--------------------------------------ETTEEEEEEEEECCCTTTHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEecCCchhHHHHHHH
Confidence 888999999999999999 478999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHH
Q 001304 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (1104)
Q Consensus 624 ~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 703 (1104)
.|+++|++++|+|||+..+|..+|+++|+
T Consensus 468 ~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi--------------------------------------------------- 496 (645)
T 3j08_A 468 ELKRMGIKVGMITGDNWRSAEAISRELNL--------------------------------------------------- 496 (645)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHHHTC---------------------------------------------------
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHHcCC---------------------------------------------------
Confidence 99999999999999999999999999998
Q ss_pred HHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcce
Q 001304 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (1104)
Q Consensus 704 ~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~ 783 (1104)
..++++++|++|.++|+.+++. +.|+|+|||.||+||++.||+||+| |+..+.++++||+
T Consensus 497 ------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~ 556 (645)
T 3j08_A 497 ------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDI 556 (645)
T ss_dssp ------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEE-CCCSCCSSCCSSS
T ss_pred ------------------CEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEe-CCCcHHHHHhCCE
Confidence 3578899999999999999988 8999999999999999999999999 6666667779999
Q ss_pred ecccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHH
Q 001304 784 SIGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLI 820 (1104)
Q Consensus 784 vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~ 820 (1104)
++.++++ +..+ +.+||++++|+++.+.|.+.+|++.
T Consensus 557 vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~ 594 (645)
T 3j08_A 557 VLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVIL 594 (645)
T ss_dssp EESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9976554 4443 5889999999999999999999874
No 8
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=3.8e-66 Score=641.79 Aligned_cols=485 Identities=17% Similarity=0.210 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCC
Q 001304 73 LIFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~ 146 (1104)
.++++++..+.+++|++.++|+ ..++.+++++|+|||++++|++++|+|||+|+|++||+|||||+|+ +
T Consensus 177 ~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~ 251 (723)
T 3j09_A 177 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----E 251 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----E
Confidence 3444555667778888887664 3455788999999999999999999999999999999999999999 5
Q ss_pred ccEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecc
Q 001304 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (1104)
Q Consensus 147 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt 226 (1104)
|.++||||+|||||.|+.| ..++.+++||
T Consensus 252 G~~~VdeS~LTGES~pv~K---------------------------------------------------~~g~~v~~Gt 280 (723)
T 3j09_A 252 GESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGAT 280 (723)
T ss_dssp CCEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTC
T ss_pred CCeEEecccccCCCcceee---------------------------------------------------cCCCeeccce
Confidence 7799999999999999999 3457899999
Q ss_pred eeccCceEEEEEEEecCcccccccc---CCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeecc
Q 001304 227 YLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (1104)
Q Consensus 227 ~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (1104)
.+.+| ++.++|++||.+|.++++. ...+.+++++++.+++++.++++++++++++.++.++++.
T Consensus 281 ~~~~g-~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~------------ 347 (723)
T 3j09_A 281 INNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------------ 347 (723)
T ss_dssp EECSS-CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST------------
T ss_pred EEecC-cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 99987 7999999999999888764 4667788999999999999988888877777766543221
Q ss_pred CCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCC
Q 001304 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (1104)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKT 383 (1104)
..++...+..+ +.+++.++|++|++++.++...+.. ++.+ .++++|+++.+|+||++++||||||
T Consensus 348 --~~~~~~~~~~~---i~vlvia~P~aL~la~p~a~~~~~~------~~a~----~gilvk~~~~lE~lg~v~~i~fDKT 412 (723)
T 3j09_A 348 --HAPLLFAFTTL---IAVLVVACPCAFGLATPTALTVGMG------KGAE----LGILIKNADALEVAEKVTAVIFDKT 412 (723)
T ss_dssp --TCTTCCSHHHH---HHHHHHHSCTTHHHHHHHHHHHHHH------HHHT----TTCEESSTTHHHHGGGCCEEEEEHH
T ss_pred --CCcHHHHHHHH---HHHHHhhhhHHHHHHHHHHHHHHHH------HHHH----CCeEEeChHHHHHhhcCCEEEEcCC
Confidence 11233333333 3467788999998887777766654 3332 3589999999999999999999999
Q ss_pred CCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHH
Q 001304 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (1104)
Q Consensus 384 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~ 463 (1104)
||||+|+|+|.+++..+. +..+++...+.|. ..++||++.|++
T Consensus 413 GTLT~g~~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hP~~~Ai~ 455 (723)
T 3j09_A 413 GTLTKGKPEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIV 455 (723)
T ss_dssp HHTSCSCCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHH
T ss_pred CccccCceEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------ccCCCchhHHHH
Confidence 999999999999876431 1123334444432 225799999999
Q ss_pred HHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHH
Q 001304 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (1104)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (1104)
+++++.|+....... ++ ..+ .+.... ..+.+|+++.+.+... ..++.+
T Consensus 456 ~~a~~~~~~~~~~~~-------------~~---~~~----g~g~~~----------~~~~~g~~~~~~~~~~--~~~~~~ 503 (723)
T 3j09_A 456 KKALEHGIELGEPEK-------------VE---VIA----GEGVVA----------DGILVGNKRLMEDFGV--AVSNEV 503 (723)
T ss_dssp HHHHHTTCCCCSCCC-------------CE---EET----TTEEEE----------TTEEEECHHHHHHTTC--CCCHHH
T ss_pred HHHHhcCCCcCCccc-------------eE---Eec----CCceEE----------EEEEECCHHHHHhcCC--CccHHH
Confidence 999988865321111 00 000 000000 1155688776654322 224678
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHH
Q 001304 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (1104)
Q Consensus 544 ~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~ 623 (1104)
.+.+++++.+|+|++++| .|++++|+++++|++|++++++|+
T Consensus 504 ~~~~~~~~~~g~~~~~va--------------------------------------~~~~~~G~i~i~D~~~~~~~~~i~ 545 (723)
T 3j09_A 504 ELALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQ 545 (723)
T ss_dssp HHHHHHHHTTTCEEEEEE--------------------------------------ETTEEEEEEEEECCSCTTHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEeecCCcchhHHHHHH
Confidence 888999999999999999 478999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHH
Q 001304 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (1104)
Q Consensus 624 ~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 703 (1104)
.|+++||+++|+|||+..+|..+|+++|+
T Consensus 546 ~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi--------------------------------------------------- 574 (723)
T 3j09_A 546 ELKRMGIKVGMITGDNWRSAEAISRELNL--------------------------------------------------- 574 (723)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHHHTC---------------------------------------------------
T ss_pred HHHHCCCEEEEECCCCHHHHHHHHHHcCC---------------------------------------------------
Confidence 99999999999999999999999999998
Q ss_pred HHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcce
Q 001304 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (1104)
Q Consensus 704 ~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~ 783 (1104)
..++++++|++|..+|+.+++. +.|+|+|||.||+|||+.||+|||| |+..+.++++||+
T Consensus 575 ------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~ 634 (723)
T 3j09_A 575 ------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDI 634 (723)
T ss_dssp ------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEEC-CCCSCCSSCCSSE
T ss_pred ------------------cEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEe-CCCcHHHHHhCCE
Confidence 3578899999999999999988 8999999999999999999999999 6665566779999
Q ss_pred ecccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHH
Q 001304 784 SIGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLI 820 (1104)
Q Consensus 784 vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~ 820 (1104)
++.++++ +..+ +.+||++|+|+++.+.|.+++|++.
T Consensus 635 vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~n~~~ 672 (723)
T 3j09_A 635 VLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVIL 672 (723)
T ss_dssp ECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9976555 4443 5899999999999999999999874
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.82 E-value=4.2e-25 Score=241.99 Aligned_cols=137 Identities=23% Similarity=0.349 Sum_probs=115.4
Q ss_pred cCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHH
Q 001304 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (1104)
Q Consensus 600 ~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1104)
.+-.+.|.+.+.|+++|+++++|+.|+++|++++|+|||+..++..+++++|+.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------- 176 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-------------------------- 176 (263)
Confidence 345688999999999999999999999999999999999999999999998872
Q ss_pred HHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhh
Q 001304 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (1104)
Q Consensus 680 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~m 759 (1104)
.+|..+.|+.|..+++.++..++.|+|||||.||++|
T Consensus 177 -------------------------------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~a 213 (263)
T 2yj3_A 177 -------------------------------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213 (263)
Confidence 1233445999999999999888899999999999999
Q ss_pred hhhcCceEEecCCchHHHhhhcceec--ccchhhHHHHHhhhhhhhhhhh
Q 001304 760 IQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTA 807 (1104)
Q Consensus 760 l~~AdvGIam~g~~~~~a~~~AD~vl--~~f~~l~~lll~~GR~~~~~i~ 807 (1104)
++.||+||++ |+....+...||+++ .++..+..+ +..+|.++++++
T Consensus 214 a~~Agv~va~-g~~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~ 261 (263)
T 2yj3_A 214 LALADVSVAM-GNGVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIP 261 (263)
Confidence 9999999999 655444556899999 555555554 578999888875
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.87 E-value=1.5e-21 Score=217.06 Aligned_cols=271 Identities=21% Similarity=0.260 Sum_probs=192.5
Q ss_pred CCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhh
Q 001304 357 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAV 436 (1104)
Q Consensus 357 ~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lal 436 (1104)
.+.++++|+++++|+++++++||||||||||.+.+.+..+...+. .+ .+++ .+
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~~--------------~~~l---~~ 66 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DE--------------RELL---RL 66 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------CH--------------HHHH---HH
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------CH--------------HHHH---HH
Confidence 345799999999999999999999999999999999988765421 00 1222 22
Q ss_pred hcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCC
Q 001304 437 CNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS 516 (1104)
Q Consensus 437 c~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 516 (1104)
|.++. ..+.+|.+.|+.+++++.|+..... ..+. ...| +.+. .
T Consensus 67 ~~~~e----------~~s~hp~~~a~~~~~~~~g~~~~~~--~~~~-~~~G-----------------~~~~----~--- 109 (287)
T 3a1c_A 67 AAIAE----------RRSEHPIAEAIVKKALEHGIELGEP--EKVE-VIAG-----------------EGVV----A--- 109 (287)
T ss_dssp HHHHT----------TTCCSHHHHHHHHHHHHTTCCCCCC--SCEE-EETT-----------------TEEE----E---
T ss_pred HHHHh----------hcCCCHHHHHHHHHHHhcCCCcccc--ccce-eecC-----------------CCeE----E---
Confidence 33322 1257999999999999988642110 0000 0001 0000 0
Q ss_pred CcEEEEecChHHhhhhhhccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 001304 517 GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 596 (1104)
Q Consensus 517 ~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~ 596 (1104)
. .+.+|.++.+..... ..++.+.+..+.+..+|.+++++++
T Consensus 110 ~---~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~i~~~~---------------------------------- 150 (287)
T 3a1c_A 110 D---GILVGNKRLMEDFGV--AVSNEVELALEKLEREAKTAVIVAR---------------------------------- 150 (287)
T ss_dssp T---TEEEECHHHHHHTTC--CCCHHHHHHHHHHHHTTCEEEEEEE----------------------------------
T ss_pred E---EEEECCHHHHHhcCC--CccHHHHHHHHHHHhCCCeEEEEEE----------------------------------
Confidence 0 133465443322111 1113456677888899999999983
Q ss_pred HhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHH
Q 001304 597 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSL 676 (1104)
Q Consensus 597 ~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1104)
|..++|.+..+++++|+++++++.|+++|+++.++||++...+..++..+|+.
T Consensus 151 ----d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------------------- 203 (287)
T 3a1c_A 151 ----NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------- 203 (287)
T ss_dssp ----TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------
T ss_pred ----CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-----------------------
Confidence 56789999999999999999999999999999999999999999999998872
Q ss_pred HHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccC
Q 001304 677 ERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGND 756 (1104)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND 756 (1104)
..|..+.|..|...++.++.. +.++||||+.||
T Consensus 204 ----------------------------------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~D 236 (287)
T 3a1c_A 204 ----------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGIND 236 (287)
T ss_dssp ----------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTC
T ss_pred ----------------------------------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHH
Confidence 234455688999999998877 899999999999
Q ss_pred hhhhhhcCceEEecCCchHHHhhhcceec--ccchhhHHHHHhhhhhhhhhh
Q 001304 757 VRMIQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRT 806 (1104)
Q Consensus 757 ~~ml~~AdvGIam~g~~~~~a~~~AD~vl--~~f~~l~~lll~~GR~~~~~i 806 (1104)
++|.+.|++||++ ++.....+..||+++ .++..+..+ +..+|.+++++
T Consensus 237 i~~a~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i 286 (287)
T 3a1c_A 237 APALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKI 286 (287)
T ss_dssp HHHHHHSSEEEEE-CCCSCCSSCCSSEEESSSCTHHHHHH-HHTTC------
T ss_pred HHHHHHCCeeEEe-CCCCHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhh
Confidence 9999999999999 554434455799999 566656554 58899888876
No 11
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.86 E-value=3.1e-22 Score=186.12 Aligned_cols=102 Identities=21% Similarity=0.282 Sum_probs=93.6
Q ss_pred hhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecccccc
Q 001304 93 LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACM 172 (1104)
Q Consensus 93 ~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~ 172 (1104)
++..++.+.+++|+|+|++++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|.
T Consensus 4 ~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~-----~g~~~vdeS~LTGEs~pv~k~------ 72 (113)
T 2hc8_A 4 KKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----EGESYVDESMISGEPVPVLKS------ 72 (113)
T ss_dssp HHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----ECCEEEECHHHHCCSSCEEEC------
T ss_pred HHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EceEEEEccccCCCCccEEEC------
Confidence 456778899999999999999999999999999999999999999999 566999999999999999993
Q ss_pred CCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccccccc
Q 001304 173 GMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (1104)
Q Consensus 173 ~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~ 251 (1104)
.++.+|+||.+.+| .+.++|++||.+|.++++.
T Consensus 73 ---------------------------------------------~g~~v~aGt~~~~G-~~~~~V~~~g~~T~~~~i~ 105 (113)
T 2hc8_A 73 ---------------------------------------------KGDEVFGATINNTG-VLKIRATRVGGETLLAQIV 105 (113)
T ss_dssp ---------------------------------------------TTCEECTTCEECSS-CEEEEEEECGGGSHHHHHH
T ss_pred ---------------------------------------------CCCEEEeCCEEeec-eEEEEEEEecCcCHHHHHH
Confidence 45789999999998 6999999999999998764
No 12
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.83 E-value=2.6e-19 Score=197.92 Aligned_cols=271 Identities=25% Similarity=0.291 Sum_probs=185.9
Q ss_pred cccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhccccc
Q 001304 363 ATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIP 442 (1104)
Q Consensus 363 ~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~ 442 (1104)
+|++.++|.+++++.|+||||||||.|+|++..+...+. ...+++..++.+..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------------------------~~~~~~~~~~~~~~--- 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------------------------SEDELLQIAASLEA--- 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------------------------CHHHHHHHHHHHHT---
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------------------------CHHHHHHHHHHhhc---
Confidence 467888999999999999999999999999998864321 11223333332221
Q ss_pred ccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEE
Q 001304 443 AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLL 522 (1104)
Q Consensus 443 ~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~ 522 (1104)
.+.+|...++.+.++..|..... ... +..++ .+.+...+ ++.. +
T Consensus 54 ----------~s~~~~~~a~~~~~~~~g~~~~~-------------~~~---~~~~~----g~~~~~~~----~~~~--~ 97 (280)
T 3skx_A 54 ----------RSEHPIAAAIVEEAEKRGFGLTE-------------VEE---FRAIP----GKGVEGIV----NGRR--Y 97 (280)
T ss_dssp ----------TCCSHHHHHHHHHHHHTTCCCCC-------------CEE---EEEET----TTEEEEEE----TTEE--E
T ss_pred ----------cCCCHHHHHHHHHHHhcCCCCCC-------------ccc---eeecC----CCEEEEEE----CCEE--E
Confidence 13567888999999888764311 000 11111 11111111 1222 2
Q ss_pred ecChHHhhhhhhccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCc
Q 001304 523 SKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602 (1104)
Q Consensus 523 ~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l 602 (1104)
..|.++.+........ ....++..++.+.+.++ .+.
T Consensus 98 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--------------------------------------~~~ 133 (280)
T 3skx_A 98 MVVSPGYIRELGIKTD------ESVEKLKQQGKTVVFIL--------------------------------------KNG 133 (280)
T ss_dssp EEECHHHHHHTTCCCC------TTHHHHHTTTCEEEEEE--------------------------------------ETT
T ss_pred EEecHHHHHHcCCCch------HHHHHHHhCCCeEEEEE--------------------------------------ECC
Confidence 2355555444322111 33556778888888877 466
Q ss_pred EEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHH
Q 001304 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 682 (1104)
Q Consensus 603 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1104)
.++|.+.++|+++++++++++.|+++|+++.++||++...+..+++.+|+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------------------------- 184 (280)
T 3skx_A 134 EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD----------------------------- 184 (280)
T ss_dssp EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh-----------------------------
Confidence 789999999999999999999999999999999999999999999998872
Q ss_pred ccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhh
Q 001304 683 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK 762 (1104)
Q Consensus 683 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~ 762 (1104)
..+..+.|.+|...++.+.+.. .++|||||.||++|++.
T Consensus 185 ----------------------------------------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 185 ----------------------------------------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQ 223 (280)
T ss_dssp ----------------------------------------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHH
T ss_pred ----------------------------------------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHh
Confidence 2445677889999999888765 67999999999999999
Q ss_pred cCceEEecCCchHHHhhhcceec--ccchhhHHHHHhhhhhhhhhhhHHHHh
Q 001304 763 ADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQY 812 (1104)
Q Consensus 763 AdvGIam~g~~~~~a~~~AD~vl--~~f~~l~~lll~~GR~~~~~i~~~i~~ 812 (1104)
|++||+| |+....++..||+++ .+.+.+..+ +..+|.++.+++..+.|
T Consensus 224 Ag~~va~-~~~~~~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~ 273 (280)
T 3skx_A 224 ADVGIAI-GAGTDVAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAW 273 (280)
T ss_dssp SSEEEEC-SCCSSSCCCSSSEECSSCCTHHHHHH-HHHHHTCCC--------
T ss_pred CCceEEe-cCCcHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999 776666777899998 455555554 47888888877655444
No 13
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.82 E-value=1.4e-20 Score=178.39 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=92.0
Q ss_pred hhhHhhcceEEEEEECCe------EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEee
Q 001304 93 LSDKKANEKEVWVVKQGI------KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1104)
Q Consensus 93 ~~~~~~n~~~~~V~r~g~------~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1104)
++..++.+.+++|+|+|. ++.|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|
T Consensus 10 ~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi-----~g~~~vdeS~LTGEs~pv~k- 83 (124)
T 2kij_A 10 AKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVI-----EGHSMVDESLITGEAMPVAK- 83 (124)
T ss_dssp HHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEEC-----SCCCEEECTTTTCCSSCEEC-
T ss_pred HHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEE-----EccEEEEeccccCCCccEEe-
Confidence 345677899999999764 688999999999999999999999999999 56679999999999999999
Q ss_pred ccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccc
Q 001304 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1104)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1104)
..++.+|+||.+.+| .+.+.|++||.+|.
T Consensus 84 --------------------------------------------------~~g~~v~aGt~~~~G-~~~~~v~~~g~~T~ 112 (124)
T 2kij_A 84 --------------------------------------------------KPGSTVIAGSINQNG-SLLICATHVGADTT 112 (124)
T ss_dssp --------------------------------------------------CTTEEECTTCEEESS-CCEEEECSCTTTCH
T ss_pred --------------------------------------------------CCCCEEEcCCEEeee-EEEEEEEEecccCH
Confidence 345789999999998 69999999999999
Q ss_pred cccccC
Q 001304 247 LGMTRG 252 (1104)
Q Consensus 247 ~~~~~~ 252 (1104)
++++.+
T Consensus 113 ~~~I~~ 118 (124)
T 2kij_A 113 LSQIVK 118 (124)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988654
No 14
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.71 E-value=1.6e-18 Score=174.50 Aligned_cols=138 Identities=21% Similarity=0.256 Sum_probs=104.5
Q ss_pred HHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEE
Q 001304 429 RFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS 508 (1104)
Q Consensus 429 ~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrms 508 (1104)
+.+...++|+.... ..+||+|.|+++++...+. ......|+++..+||||+|||||
T Consensus 17 ~vl~~a~L~s~~~~----------~~~n~~d~Ail~~~~~~~~--------------~~~~~~~~~~~eiPFds~rKrms 72 (170)
T 3gwi_A 17 RVLHSAWLNSHYQT----------GLKNLLDTAVLEGTDEESA--------------RSLASRWQKIDEIPFDFERRRMS 72 (170)
T ss_dssp HHHHHHHHHHHHCC----------SCCCHHHHHHHHTSCHHHH--------------HHHHHHSEEEEEECCCTTTCEEE
T ss_pred HHHHHHHHcCCCCC----------CCCChHHHHHHHHHHhcCh--------------hhhhhcCeEEeeEecCcccCcEE
Confidence 45566667764331 1369999999998754321 01134578899999999999999
Q ss_pred EEEEeCCCCcEEEEecChHHhhhhhhccC-----------CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001304 509 VVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (1104)
Q Consensus 509 viv~~~~~~~~~l~~KGa~e~i~~~~~~~-----------~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~ 577 (1104)
++++.+ +|++++++|||||.|+++|+.. ...+.+.+.+++|+.+|+|||++|||.++.++..
T Consensus 73 vv~~~~-~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~------ 145 (170)
T 3gwi_A 73 VVVAEN-TEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD------ 145 (170)
T ss_dssp EEEESS-SSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC------
T ss_pred EEEEeC-CCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc------
Confidence 999875 5788999999999999999731 1235788999999999999999999998753200
Q ss_pred HHHhhhhchHHHHHHHHHHHhccCcEEEEEEeeccc
Q 001304 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDR 613 (1104)
Q Consensus 578 ~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~ 613 (1104)
. ....|+||+|+|++|+-|.
T Consensus 146 ------~----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 ------Y----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp ------C----------CGGGSCSEEEEEEEEEEC-
T ss_pred ------c----------CccccCCcEEEehhccccc
Confidence 0 0245899999999999885
No 15
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=99.46 E-value=5.8e-14 Score=156.50 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=104.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
.++++++++++++.|+++|+++.|+|||...++.++|+++|+..++.. +. .+....+ .
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~--i~-~n~l~~~-------------------~ 196 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK--VV-SNFMDFD-------------------E 196 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEE--EE-EECEEEC-------------------T
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccce--EE-eeeEEEc-------------------c
Confidence 479999999999999999999999999999999999999998655321 11 1110000 0
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhh---hcCceE
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ---KADIGV 767 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~---~AdvGI 767 (1104)
......+.+ .....+++..|.+|...+..+++.++.|+|+|||+||+||++ .||+||
T Consensus 197 ~~~~~~~~~--------------------~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgi 256 (297)
T 4fe3_A 197 NGVLKGFKG--------------------ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHIL 256 (297)
T ss_dssp TSBEEEECS--------------------SCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEE
T ss_pred cceeEeccc--------------------cccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEE
Confidence 000000101 113456788899999888888888999999999999999955 999999
Q ss_pred EecC------CchHH-HhhhcceecccchhhHHH
Q 001304 768 GISG------REGLQ-AARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 768 am~g------~~~~~-a~~~AD~vl~~f~~l~~l 794 (1104)
+| | .++.+ ++++||+||.++++....
T Consensus 257 ai-Gfl~~~v~~~~d~~~e~~Divl~~d~~~~v~ 289 (297)
T 4fe3_A 257 KI-GYLNDRVDELLEKYMDSYDIVLVKEESLEVV 289 (297)
T ss_dssp EE-EEECSSHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred EE-EecchhHHHhHHHHHhhCCEEEECCCChHHH
Confidence 99 6 13333 456999999998886544
No 16
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=99.14 E-value=2.2e-10 Score=126.12 Aligned_cols=188 Identities=19% Similarity=0.206 Sum_probs=112.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC--------------CCeEEEecCCcHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP--------------KGQLLSIDGKTEDEVCRSLER 678 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 678 (1104)
.+.+.+.++|++++++|++++++||++...+..+..++|+..... .+..+.....+.+.+.+.++.
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~ 101 (279)
T 4dw8_A 22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYEC 101 (279)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 567889999999999999999999999999999999998731100 111222222222223222222
Q ss_pred HHHH-cc--cc------------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHh-Hhh
Q 001304 679 VLLT-MR--IT------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTE-LAI 718 (1104)
Q Consensus 679 ~~~~-~~--~~------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~ 718 (1104)
..+. .. .. .....+..+..+...++.+.+.+.+.+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 4dw8_A 102 ARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINV 181 (279)
T ss_dssp HHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCEE
T ss_pred HHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEEE
Confidence 1111 00 00 01111222222222334444444444321 222
Q ss_pred hccceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchh--
Q 001304 719 LSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF-- 790 (1104)
Q Consensus 719 ~~~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~-- 790 (1104)
......+.++.|. .|+..++.+.+ ..+.|+++||+.||++|++.|++||+| |++..++++.||+++.+.+.
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~~~e~G 260 (279)
T 4dw8_A 182 FRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM-GNAQEPVKKAADYITLTNDEDG 260 (279)
T ss_dssp EEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCGGGTH
T ss_pred EEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-CCCcHHHHHhCCEEcCCCCCcH
Confidence 2233445677777 79988887765 236799999999999999999999999 88888899999999975332
Q ss_pred ----hHHHHHhhhhh
Q 001304 791 ----LKRLILVHGRY 801 (1104)
Q Consensus 791 ----l~~lll~~GR~ 801 (1104)
+..++..+|+.
T Consensus 261 v~~~i~~~~~~~~~~ 275 (279)
T 4dw8_A 261 VAEAIERIFNVEGHH 275 (279)
T ss_dssp HHHHHHHHC------
T ss_pred HHHHHHHHHhccccc
Confidence 34444455654
No 17
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=99.13 E-value=3e-10 Score=125.84 Aligned_cols=192 Identities=18% Similarity=0.215 Sum_probs=114.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCC--------eEEEecCCcHHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG--------QLLSIDGKTEDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 682 (1104)
.+.+.+.++|++++++|++++++||+....+..+...+|+..+ ..++ ..+.-.....+.+.+.++.. ..
T Consensus 23 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~-~~ 101 (290)
T 3dnp_A 23 KIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVL-ES 101 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSEECCCCHHHHHHHHHHH-HT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHHH-HH
Confidence 5778899999999999999999999999999999999987421 0000 11111112223333322222 21
Q ss_pred cccc------------C-------------------------------------CCCCceEEEEcchhHHHHHHHHHHHH
Q 001304 683 MRIT------------T-------------------------------------SEPKDVAFVVDGWALEIALKHYRKAF 713 (1104)
Q Consensus 683 ~~~~------------~-------------------------------------~~~~~~~lvi~g~~l~~~~~~~~~~f 713 (1104)
.... . ....++.+..+...++.+.+.+.+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 181 (290)
T 3dnp_A 102 YQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAF 181 (290)
T ss_dssp SSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHHHHHC
T ss_pred cCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhhC
Confidence 1000 0 00011111122233333333332222
Q ss_pred HhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 714 TELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 714 ~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
..+........+.++.|. .|+..++.+.+ . .+.|+++||+.||++|++.|++||+| ||+...++..||++..+
T Consensus 182 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~s 260 (290)
T 3dnp_A 182 PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM-GNAVPEIKRKADWVTRS 260 (290)
T ss_dssp TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCC
T ss_pred CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe-cCCcHHHHHhcCEECCC
Confidence 223222333445567775 69998887765 2 36799999999999999999999999 88888899999999875
Q ss_pred chh------hHHHHHhhhhhhhhhh
Q 001304 788 FRF------LKRLILVHGRYSYNRT 806 (1104)
Q Consensus 788 f~~------l~~lll~~GR~~~~~i 806 (1104)
.+. +.+++...+++-|.+-
T Consensus 261 ~~edGv~~~i~~~~~~~~~~~~~~~ 285 (290)
T 3dnp_A 261 NDEQGVAYMMKEYFRMQQRKGFLDK 285 (290)
T ss_dssp TTTTHHHHHHHHHHHHHHHC-----
T ss_pred CCccHHHHHHHHHHHhcCcccHHhH
Confidence 332 4444445566655543
No 18
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=99.10 E-value=3.5e-10 Score=124.54 Aligned_cols=173 Identities=17% Similarity=0.203 Sum_probs=103.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC-------------CCeEEEecCCcHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP-------------KGQLLSIDGKTEDEVCRSLERV 679 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 679 (1104)
.+.+.+.++|++++++|++++++||+....+..+...+|+..+.. .+..+.......+.+.+.++..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999999998753211 0112222222333333333222
Q ss_pred HHHcccc-----------------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHh-Hh
Q 001304 680 LLTMRIT-----------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTE-LA 717 (1104)
Q Consensus 680 ~~~~~~~-----------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~ 717 (1104)
.+ .... .....+..+..+...++...+.+.+.+.. +.
T Consensus 102 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 102 RK-VRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HH-TTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HH-cCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 11 1000 01111122222223333333333333322 22
Q ss_pred hhccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 718 ILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 718 ~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.......+.++.|. +|+..++.+.+ . .+.++++||+.||++|++.|++||+| ||+..+++..||++..+
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~ 255 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM-GNAIDEVKEAAQAVTLT 255 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC--
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec-cCCCHHHHHhcceeccC
Confidence 23334456677775 59998887765 2 36799999999999999999999999 88888899999999865
No 19
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.08 E-value=2.8e-10 Score=117.50 Aligned_cols=135 Identities=13% Similarity=0.089 Sum_probs=101.0
Q ss_pred cEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHH
Q 001304 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 602 l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1104)
...++...++|.+ +|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 41 ~~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~--------------------------- 87 (189)
T 3mn1_A 41 GSEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH--------------------------- 87 (189)
T ss_dssp SCEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------
T ss_pred CcEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------
Confidence 3455556665554 9999999999999999999999999999999821
Q ss_pred HccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccCh
Q 001304 682 TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDV 757 (1104)
Q Consensus 682 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~ 757 (1104)
++... ..|...++.+.+ ..+.++++||+.||+
T Consensus 88 ------------------------------------------~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi 123 (189)
T 3mn1_A 88 ------------------------------------------LFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDL 123 (189)
T ss_dssp ------------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------HhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence 11111 556666665554 247899999999999
Q ss_pred hhhhhcCceEEecCCchHHHhhhcceecccc------hhhHHHHHhhhhhhhhhhhHHHHhHhh
Q 001304 758 RMIQKADIGVGISGREGLQAARAADYSIGKF------RFLKRLILVHGRYSYNRTAFLSQYSFY 815 (1104)
Q Consensus 758 ~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f------~~l~~lll~~GR~~~~~i~~~i~~~~~ 815 (1104)
+|++.|++|+++ ++....++..||+++.+. +.+... +...|..+.++.+.+.|.+.
T Consensus 124 ~~~~~ag~~~~~-~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~ 185 (189)
T 3mn1_A 124 PVIRRVGLGMAV-ANAASFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHH 185 (189)
T ss_dssp HHHHHSSEEEEC-TTSCHHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC-
T ss_pred HHHHHCCCeEEe-CCccHHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccc
Confidence 999999999999 666667778999999863 334443 45677888888776665543
No 20
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=99.07 E-value=4.3e-10 Score=124.18 Aligned_cols=176 Identities=14% Similarity=0.112 Sum_probs=112.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC----CC-----CCeEEEecCCcHHHHHHHHHHHHHH-
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EP-----KGQLLSIDGKTEDEVCRSLERVLLT- 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 682 (1104)
.+.+.+.++|++++++|++++++||+....+..+...+++..+ +. .+..+.-...+.+.+.+.++...+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 5778899999999999999999999999999998888765211 10 0112222222333333333222211
Q ss_pred -------------------------ccc--------------cC-CCCCceEEEEcchhHHHHHHHHHHHHHh-Hhhhcc
Q 001304 683 -------------------------MRI--------------TT-SEPKDVAFVVDGWALEIALKHYRKAFTE-LAILSR 721 (1104)
Q Consensus 683 -------------------------~~~--------------~~-~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~ 721 (1104)
+.. .. ....++.+..+.+..+...+.+.+.|.. +.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s 198 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAA 198 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEe
Confidence 000 00 1112222222344444444444455432 222233
Q ss_pred ceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 722 TAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 722 ~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
...+.+++|. +|+..++.+.+ . .+.|+++||+.||++|++.|++|||| ||+...+++.||++..+.+
T Consensus 199 ~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~s~~ 271 (283)
T 3dao_A 199 GKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-SNARQEVIAAAKHTCAPYW 271 (283)
T ss_dssp TTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHHSSEEECCGG
T ss_pred cCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-CCCCHHHHHhcCeECCCCC
Confidence 3445677776 59998888775 2 36799999999999999999999999 8888889999999987533
No 21
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=99.04 E-value=5.9e-10 Score=123.16 Aligned_cols=171 Identities=21% Similarity=0.187 Sum_probs=107.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC----C------CCCeEEEecCCcHHHHHHHHHHHHH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----E------PKGQLLSIDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1104)
..+.+.+.++|++++++|++++++||+....+..+...+|+..+ + ..+..+.-...+.+.+...++....
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 35778899999999999999999999999999999999987421 0 0111222222233333322221110
Q ss_pred Hc--cc----------cC---------------------C--CCCc--eEEEE--cchhHHHHHHHHHHHHHh-Hhhhcc
Q 001304 682 TM--RI----------TT---------------------S--EPKD--VAFVV--DGWALEIALKHYRKAFTE-LAILSR 721 (1104)
Q Consensus 682 ~~--~~----------~~---------------------~--~~~~--~~lvi--~g~~l~~~~~~~~~~f~~-l~~~~~ 721 (1104)
.. .. .. . .... ..++. +.+.++.+.+.+.+.|.. +.....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 00 00 00 0 0011 11222 223344444445554432 222233
Q ss_pred ceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcce
Q 001304 722 TAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (1104)
Q Consensus 722 ~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~ 783 (1104)
...+.++.|. .|+..++.+.+ . .+.+++|||+.||++|++.|++|||| ||+..++++.||+
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm-~Na~~~vk~~A~~ 263 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM-ANAHQRLKDLHPE 263 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCTT
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc-cCCCHHHHHhCCC
Confidence 3456677775 69998888765 2 36799999999999999999999999 9999999999985
No 22
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=99.04 E-value=3.4e-10 Score=120.44 Aligned_cols=172 Identities=17% Similarity=0.165 Sum_probs=103.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEe-cCC------cHHHHHHHHHHHHH
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI-DGK------TEDEVCRSLERVLL 681 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~-~~~------~~~~~~~~~~~~~~ 681 (1104)
..++.+++.++|++|+++|++++++|||....+..++.++|+..+ ..++..+.. ++. .. +....+ +.+.
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l-~~~~~i-~~~~ 97 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE-GTNKFL-EEMS 97 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH-HHHHHH-HHHT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH-HHHHHH-HHHH
Confidence 346788899999999999999999999999999999999987432 001111111 121 11 222222 2221
Q ss_pred HccccCC------CCCceEE-EEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhc----CCeEE
Q 001304 682 TMRITTS------EPKDVAF-VVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSC----DYRTL 748 (1104)
Q Consensus 682 ~~~~~~~------~~~~~~l-vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~----~~~v~ 748 (1104)
....... ...+... +..+. ....+.+.+.+ .+... ....+.+++| .+|+..++.+.+. .+.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~-~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~ 173 (227)
T 1l6r_A 98 KRTSMRSILTNRWREASTGFDIDPED--VDYVRKEAESR-GFVIF-YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEIL 173 (227)
T ss_dssp TTSSCBCCGGGGGCSSSEEEBCCGGG--HHHHHHHHHTT-TEEEE-EETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred HHhcCCccccccceecccceEEecCC--HHHHHHHHHhc-CEEEE-ecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEE
Confidence 1000000 0000000 00011 01111122222 22222 3334567778 4799999888752 35799
Q ss_pred EEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 749 ~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
++||+.||++|++.|++||+| ++....++..||+++.+.+
T Consensus 174 ~iGD~~nD~~m~~~ag~~va~-~n~~~~~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 174 VIGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYSY 213 (227)
T ss_dssp EECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCCT
T ss_pred EECCcHHhHHHHHHcCceEEe-cCchHHHHHhCCEEecCCC
Confidence 999999999999999999999 7777778889999987543
No 23
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.99 E-value=5.3e-10 Score=124.81 Aligned_cols=176 Identities=14% Similarity=0.130 Sum_probs=108.0
Q ss_pred cCCCC-hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC----CC-----CCeEEEecCCcHHHHHHHHHHHHHH
Q 001304 613 RLQDG-VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EP-----KGQLLSIDGKTEDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~-~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1104)
.+.+. +.++|++++++|++++++||+....+..+...+++..+ +. .+..+.....+.+.+.+.++...+.
T Consensus 54 ~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 133 (304)
T 3l7y_A 54 SYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEK 133 (304)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEEEEEecCCHHHHHHHHHHHHHh
Confidence 34555 78999999999999999999999998887766654211 00 0112222222333333333322221
Q ss_pred c-c-------------------------------------cc---CCCCCceEEEEcchhHHHHHHHHHHHHHh--Hhhh
Q 001304 683 M-R-------------------------------------IT---TSEPKDVAFVVDGWALEIALKHYRKAFTE--LAIL 719 (1104)
Q Consensus 683 ~-~-------------------------------------~~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~--l~~~ 719 (1104)
. . .. .....+..+..+...++.+.+.+.+.+.. +...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 213 (304)
T 3l7y_A 134 YPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGT 213 (304)
T ss_dssp CTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEEEEECCGGGHHHHHHHHHTSTTTTTEEEE
T ss_pred cCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEEEEEcCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 1 0 00 00001122223333444444444433432 3223
Q ss_pred ccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 720 SRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 720 ~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
.....+.++.|. .|+..++.+.+ . .+.+++|||+.||++|++.|++||+| ||+..+++..||+++.+.+
T Consensus 214 ~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 214 ASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-ANAPKNVKAAANYQAKSND 288 (304)
T ss_dssp ECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-TTSCHHHHHHCSEECCCGG
T ss_pred EcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-CCcCHHHHHhccEEcCCCC
Confidence 333445666675 69988888765 2 36799999999999999999999999 8888889999999987543
No 24
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=98.86 E-value=2.6e-09 Score=110.38 Aligned_cols=97 Identities=20% Similarity=0.136 Sum_probs=77.8
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
.+|+.|+++|+++.++||++...+..+++++|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 44999999999999999999999999999999831
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchH
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 775 (1104)
++... +.|...++.+.+ ..+.++++||+.||++|++.|++|++| ++...
T Consensus 94 ------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~-~na~~ 146 (195)
T 3n07_A 94 ------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV-ADGHP 146 (195)
T ss_dssp ------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCH
T ss_pred ------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE-CChHH
Confidence 11111 345555555443 346799999999999999999999999 77777
Q ss_pred HHhhhcceecccc
Q 001304 776 QAARAADYSIGKF 788 (1104)
Q Consensus 776 ~a~~~AD~vl~~f 788 (1104)
.++..||+++.+.
T Consensus 147 ~~~~~ad~v~~~~ 159 (195)
T 3n07_A 147 LLAQRANYVTHIK 159 (195)
T ss_dssp HHHHHCSEECSSC
T ss_pred HHHHhCCEEEcCC
Confidence 7888999999753
No 25
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=98.85 E-value=6e-09 Score=109.10 Aligned_cols=107 Identities=17% Similarity=0.113 Sum_probs=84.3
Q ss_pred EEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHc
Q 001304 604 VLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM 683 (1104)
Q Consensus 604 llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1104)
.+....+.|.+ +|+.|+++|+++.++||++...+..+++++|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 44555555554 9999999999999999999999999999999821
Q ss_pred cccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhh
Q 001304 684 RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRM 759 (1104)
Q Consensus 684 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~m 759 (1104)
++..+ +.|..+++.+.+ ..+.++++||+.||++|
T Consensus 118 ----------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~ 155 (211)
T 3ij5_A 118 ----------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPV 155 (211)
T ss_dssp ----------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred ----------------------------------------hhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHH
Confidence 11111 456666666554 25789999999999999
Q ss_pred hhhcCceEEecCCchHHHhhhcceecccc
Q 001304 760 IQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 760 l~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
++.|++++++ ++....++..||+++.+.
T Consensus 156 ~~~ag~~~a~-~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 156 MAQVGLSVAV-ADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp HTTSSEEEEC-TTSCTTTGGGSSEECSSC
T ss_pred HHHCCCEEEe-CCccHHHHhhCCEEEeCC
Confidence 9999999999 666666777999999764
No 26
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.85 E-value=8.2e-09 Score=113.00 Aligned_cols=172 Identities=13% Similarity=0.163 Sum_probs=102.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC-CCCCeEE-------EecCCcHHHHHHHHHHHHHH-c
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKGQLL-------SIDGKTEDEVCRSLERVLLT-M 683 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~ 683 (1104)
.+.+.+.++|++++++|+++.++||++...+..+..++|+... ..++..+ .-...+.+.+.+.++...+. .
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 101 (274)
T 3fzq_A 22 GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREV 101 (274)
T ss_dssp BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEECCCCHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEcCCCHHHHHHHHHHHHHCCc
Confidence 4678889999999999999999999999999888888776310 0001112 11222233333222221110 0
Q ss_pred cc--c-----------------------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHH
Q 001304 684 RI--T-----------------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFT 714 (1104)
Q Consensus 684 ~~--~-----------------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~ 714 (1104)
.. . .....+..+. ... ...+.+.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~~---~~~~~~~~~l~ 177 (274)
T 3fzq_A 102 AFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLW-SNE---KVFDEVKDILQ 177 (274)
T ss_dssp EEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCCCCEEEEE-CCH---HHHHHHHHHHG
T ss_pred eEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccCeEEEEEE-cCH---HHHHHHHHHhh
Confidence 00 0 0011122222 111 11222333332
Q ss_pred h-Hhhhccce--eeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceec
Q 001304 715 E-LAILSRTA--ICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (1104)
Q Consensus 715 ~-l~~~~~~~--i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl 785 (1104)
. +....... .+.++.|. .|+..++.+.+ ..+.++++||+.||++|++.|++||+| |++..++++.||+++
T Consensus 178 ~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~ 256 (274)
T 3fzq_A 178 DKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM-KNSHQQLKDIATSIC 256 (274)
T ss_dssp GGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE-TTSCHHHHHHCSEEE
T ss_pred cceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe-cCccHHHHHhhhhee
Confidence 2 11111111 33456665 68888877665 346799999999999999999999999 888888999999999
Q ss_pred ccch
Q 001304 786 GKFR 789 (1104)
Q Consensus 786 ~~f~ 789 (1104)
.+.+
T Consensus 257 ~~~~ 260 (274)
T 3fzq_A 257 EDIF 260 (274)
T ss_dssp CCGG
T ss_pred CCCc
Confidence 7543
No 27
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.84 E-value=1.6e-08 Score=109.69 Aligned_cols=172 Identities=19% Similarity=0.213 Sum_probs=100.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC-CCCC-------eEEEecCCcHHHHHHHHHHHHHHcc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKG-------QLLSIDGKTEDEVCRSLERVLLTMR 684 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1104)
.+.+.+.++|++++++|++++++||++...+..+..++++..- ..++ ..+.-...+.+.+...++.. +...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~-~~~~ 98 (258)
T 2pq0_A 20 QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEA-HKNG 98 (258)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHH-HHTT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHH-HhCC
Confidence 4677889999999999999999999999999999888875210 0011 11111222333333322221 1110
Q ss_pred c----cCCC---------------------------------CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec
Q 001304 685 I----TTSE---------------------------------PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR 727 (1104)
Q Consensus 685 ~----~~~~---------------------------------~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r 727 (1104)
. .... ...+.+++.+..- ......+.+..+.......-+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e 176 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAE--EEEPYVRNYPEFRFVRWHDVSTD 176 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHH--HHHHHHHHCTTEEEEEEETTEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHH--HHHHHHHhCCCeEEEEeCCceEE
Confidence 0 0000 0011122222210 00111111111111111222344
Q ss_pred cChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 728 VTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 728 ~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
+.|. +|+..++.+.+ ..+.|+++||+.||++|++.|++||+| ||+..+++..||++..+.
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKRVADFVTKPV 242 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHHTCSEEECCG
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHHhCCEEeCCC
Confidence 5554 69988887765 246799999999999999999999999 888888888999998653
No 28
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=98.82 E-value=4.8e-09 Score=105.42 Aligned_cols=107 Identities=17% Similarity=0.138 Sum_probs=83.9
Q ss_pred cCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHH--HcCCCCCCCCCeEEEecCCcHHHHHHHHH
Q 001304 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTEDEVCRSLE 677 (1104)
Q Consensus 600 ~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1104)
.+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 29 ~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------ 76 (168)
T 3ewi_A 29 GDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------ 76 (168)
T ss_dssp SSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------
T ss_pred CCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------
Confidence 34466777788877 3899999999999999999 67777888 44541
Q ss_pred HHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-c---CCeEEEEcCC
Q 001304 678 RVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDG 753 (1104)
Q Consensus 678 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~---~~~v~~iGDG 753 (1104)
++ ..+++|...++.+.+ . .+.++++||+
T Consensus 77 ----------------------------------------------~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~ 108 (168)
T 3ewi_A 77 ----------------------------------------------TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNE 108 (168)
T ss_dssp ----------------------------------------------EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred ----------------------------------------------EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCC
Confidence 01 113467777776654 2 4679999999
Q ss_pred ccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 754 GNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 754 ~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.||++|++.|+++++| ++....+++.||+++.+
T Consensus 109 ~nDi~~~~~ag~~~a~-~na~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 109 VSDEECLKRVGLSAVP-ADACSGAQKAVGYICKC 141 (168)
T ss_dssp GGGHHHHHHSSEEEEC-TTCCHHHHTTCSEECSS
T ss_pred HhHHHHHHHCCCEEEe-CChhHHHHHhCCEEeCC
Confidence 9999999999999999 77777888899999975
No 29
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=98.80 E-value=1.4e-08 Score=103.21 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=77.2
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999972
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
++... +.|...++.+.+ . .+.++++||+.||++|++.|++|+++ ++....
T Consensus 80 -----------------------~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~-~~~~~~ 133 (176)
T 3mmz_A 80 -----------------------VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV-ASAHDV 133 (176)
T ss_dssp -----------------------EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHH
T ss_pred -----------------------eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC-CChhHH
Confidence 11111 456666665544 2 46799999999999999999999999 666666
Q ss_pred Hhhhcceeccc
Q 001304 777 AARAADYSIGK 787 (1104)
Q Consensus 777 a~~~AD~vl~~ 787 (1104)
++..||+++.+
T Consensus 134 ~~~~ad~v~~~ 144 (176)
T 3mmz_A 134 VRGAARAVTTV 144 (176)
T ss_dssp HHHHSSEECSS
T ss_pred HHHhCCEEecC
Confidence 77899999987
No 30
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=98.79 E-value=1.4e-08 Score=103.83 Aligned_cols=102 Identities=15% Similarity=0.067 Sum_probs=80.0
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceE
Q 001304 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVA 694 (1104)
Q Consensus 615 r~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1104)
.+++.++|+.|+++|++++++||++...+..+++++|+.. .++
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------~~~----------------------------- 79 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------FFL----------------------------- 79 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------EEE-----------------------------
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce--------eec-----------------------------
Confidence 3456789999999999999999999999999999998721 001
Q ss_pred EEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceEEec
Q 001304 695 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 695 lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
. ...|...++.+.+ .+ +.++++||+.||++|++.|++++++
T Consensus 80 --------------------------------~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~- 124 (180)
T 1k1e_A 80 --------------------------------G--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV- 124 (180)
T ss_dssp --------------------------------S--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-
T ss_pred --------------------------------C--CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-
Confidence 0 1345555554433 23 6899999999999999999999999
Q ss_pred CCchHHHhhhcceecccc
Q 001304 771 GREGLQAARAADYSIGKF 788 (1104)
Q Consensus 771 g~~~~~a~~~AD~vl~~f 788 (1104)
++....++..||+++.+.
T Consensus 125 ~~~~~~~~~~ad~v~~~~ 142 (180)
T 1k1e_A 125 ADAPIYVKNAVDHVLSTH 142 (180)
T ss_dssp TTSCHHHHTTSSEECSSC
T ss_pred CCccHHHHhhCCEEecCC
Confidence 666666777999999865
No 31
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=98.77 E-value=2.1e-08 Score=110.45 Aligned_cols=175 Identities=18% Similarity=0.211 Sum_probs=104.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC-----CCCeEEEe--cC-------CcHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----PKGQLLSI--DG-------KTEDEVCRSLER 678 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~-----~~~~~~~~--~~-------~~~~~~~~~~~~ 678 (1104)
.+.+++.++|++++++|++++++|||....+..+..++++..+. .++..+.. ++ .+.+.+.+.++.
T Consensus 22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~~ 101 (282)
T 1rkq_A 22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 101 (282)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 46778999999999999999999999999999999999874311 11112221 12 122222222221
Q ss_pred HHHH-cc--cc--------C-----------------------------CCCCceEEEEcchhHHHHHHHHHHHHH-hHh
Q 001304 679 VLLT-MR--IT--------T-----------------------------SEPKDVAFVVDGWALEIALKHYRKAFT-ELA 717 (1104)
Q Consensus 679 ~~~~-~~--~~--------~-----------------------------~~~~~~~lvi~g~~l~~~~~~~~~~f~-~l~ 717 (1104)
..+. .. .. . ....++.+..+.+.++.+.+.+.+.+. .+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 181 (282)
T 1rkq_A 102 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 181 (282)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEE
Confidence 1110 00 00 0 000011111111222233322222221 122
Q ss_pred hhccceeeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 718 ILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 718 ~~~~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
......-+.+++|. .|+..++.+.+. .+.++++||+.||++|++.|++||+| |++...++..||+++.+.
T Consensus 182 ~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~a~~v~~~~ 257 (282)
T 1rkq_A 182 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKSN 257 (282)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred EEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe-cCCcHHHHhhCCEEecCC
Confidence 22222335677777 799988887652 35799999999999999999999999 777677778999998753
No 32
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.75 E-value=1.1e-08 Score=111.71 Aligned_cols=64 Identities=30% Similarity=0.470 Sum_probs=53.8
Q ss_pred eeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 725 CCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
+.++.|. .|+..++.+.+ . .+.++++||+.||++|++.|++||+| ||+..++++.||++..+.+
T Consensus 185 ~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 185 FADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM-GNASEKVQSVADFVTDTVD 254 (268)
T ss_dssp EEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTCSEECCCTT
T ss_pred eEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe-CCCcHHHHHhcCEeeCCCC
Confidence 4556665 69988887765 2 35799999999999999999999999 8988889999999997543
No 33
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=98.73 E-value=2.6e-08 Score=102.78 Aligned_cols=114 Identities=19% Similarity=0.170 Sum_probs=83.5
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchh
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 701 (1104)
|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999999832
Q ss_pred HHHHHHHHHHHHHhHhhhccceeeecc--ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh
Q 001304 702 LEIALKHYRKAFTELAILSRTAICCRV--TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (1104)
Q Consensus 702 l~~~~~~~~~~f~~l~~~~~~~i~~r~--sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~ 779 (1104)
++..+ .|+-...+++.+.-..+.++++||+.||++|++.|++++++ ++....++.
T Consensus 88 ----------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~ 144 (191)
T 3n1u_A 88 ----------------------YYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SNAVPQVLE 144 (191)
T ss_dssp ----------------------EECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHH
T ss_pred ----------------------ceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CCccHHHHH
Confidence 11111 22233334444444457899999999999999999999999 666667778
Q ss_pred hcceecccch------hhHHHHHhhhhhhhhhh
Q 001304 780 AADYSIGKFR------FLKRLILVHGRYSYNRT 806 (1104)
Q Consensus 780 ~AD~vl~~f~------~l~~lll~~GR~~~~~i 806 (1104)
.||+++.+.. .+... +...|..+.++
T Consensus 145 ~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~ 176 (191)
T 3n1u_A 145 FADWRTERTGGRGAVRELCDL-ILNAQNKAELA 176 (191)
T ss_dssp HSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHH
T ss_pred hCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHH
Confidence 9999998633 23333 34455555554
No 34
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.72 E-value=3.2e-08 Score=108.30 Aligned_cols=175 Identities=17% Similarity=0.197 Sum_probs=101.5
Q ss_pred CCCCh-HHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeE-------EEecCCcHHHHHHHHHHHHHHc
Q 001304 614 LQDGV-PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQL-------LSIDGKTEDEVCRSLERVLLTM 683 (1104)
Q Consensus 614 lr~~~-~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 683 (1104)
+.+.+ .++|++|+++|++++++|||+...+..+..++++..+ ..++.. +.-...+.+.+.+.++...+..
T Consensus 21 i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 100 (271)
T 1rlm_A 21 YNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDK 100 (271)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeEEEEecCCHHHHHHHHHHHHhCC
Confidence 55564 8999999999999999999999988877766653211 001111 2212223333333222221110
Q ss_pred cc-------------------------------c--CC----CCC--ceEEEEcchhHHHHHHHHHHHHHh-Hhhhccce
Q 001304 684 RI-------------------------------T--TS----EPK--DVAFVVDGWALEIALKHYRKAFTE-LAILSRTA 723 (1104)
Q Consensus 684 ~~-------------------------------~--~~----~~~--~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~~~ 723 (1104)
.. . .. ... +..+..+....+.+.+.+.+.+.. +.......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 180 (271)
T 1rlm_A 101 QLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 180 (271)
T ss_dssp TCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECST
T ss_pred CccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEEcCHHHHHHHHHHHHHHcCCcEEEEeccC
Confidence 00 0 00 001 112222333344444444433322 11111222
Q ss_pred eeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 724 ICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
-+.++.|. .|+..++.+.+. .+.++++||+.||++|++.|++||+| |++..+++..||+++.+.+
T Consensus 181 ~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 181 GFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDDNN 251 (271)
T ss_dssp TEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCCGG
T ss_pred CeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEe-CCccHHHHHhCCeeCcCCC
Confidence 23355555 799888877652 35799999999999999999999999 7877778889999987543
No 35
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=98.72 E-value=6.2e-08 Score=107.66 Aligned_cols=175 Identities=14% Similarity=0.164 Sum_probs=104.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHH--HHcC-CCCCC-----CCCeEEEe-cC-------CcHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA--LSCN-FISPE-----PKGQLLSI-DG-------KTEDEVCRSL 676 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia--~~~g-i~~~~-----~~~~~~~~-~~-------~~~~~~~~~~ 676 (1104)
.+.+.+.++|++|+++|++++++|||....+..+. .+++ +..+. .+|..+.. ++ -+.+.+...+
T Consensus 45 ~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~ 124 (301)
T 2b30_A 45 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELI 124 (301)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEeCCCCEEEEccCCHHHHHHHH
Confidence 47778999999999999999999999999999998 8777 53110 01112221 22 2223333322
Q ss_pred HHHHH-Hc-c--cc--C------CC--C---------------------------CceEEEEcchhHHHHHHHHHHHHH-
Q 001304 677 ERVLL-TM-R--IT--T------SE--P---------------------------KDVAFVVDGWALEIALKHYRKAFT- 714 (1104)
Q Consensus 677 ~~~~~-~~-~--~~--~------~~--~---------------------------~~~~lvi~g~~l~~~~~~~~~~f~- 714 (1104)
+...+ .. . .. . .. . .++.+..+...++.+.+.+.+.|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l~~~~~~ 204 (301)
T 2b30_A 125 SYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKN 204 (301)
T ss_dssp HHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTT
T ss_pred HHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCceEEEEECCHHHHHHHHHHHHHHhcC
Confidence 22111 01 0 00 0 00 0 000001111223333333333221
Q ss_pred hHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecc-c
Q 001304 715 ELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG-K 787 (1104)
Q Consensus 715 ~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~-~ 787 (1104)
.+........+.+++|. .|+..++.+.+ . .+.++++||+.||++|++.|++||+| |++...++..||+++. +
T Consensus 205 ~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~~ 283 (301)
T 2b30_A 205 KLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPVS 283 (301)
T ss_dssp TEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSSC
T ss_pred CEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEE-cCCcHHHHhhCCEEEccC
Confidence 12222223345677777 79999888775 2 35799999999999999999999999 7777778889999987 5
Q ss_pred c
Q 001304 788 F 788 (1104)
Q Consensus 788 f 788 (1104)
.
T Consensus 284 ~ 284 (301)
T 2b30_A 284 H 284 (301)
T ss_dssp T
T ss_pred C
Confidence 3
No 36
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=98.71 E-value=2.1e-08 Score=113.47 Aligned_cols=123 Identities=22% Similarity=0.242 Sum_probs=85.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||+....+..++..+|+...-.. .+.+.
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~--~l~~~--------------------------- 228 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN--TLEIV--------------------------- 228 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEE---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee--eeEee---------------------------
Confidence 6899999999999999999999999999999999999998321000 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceee-eccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~-~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
+|. . ...+. --..++.|...++.+.+ ..+.++++|||.||++|++.||+|+
T Consensus 229 -----d~~------------------~-tg~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~v 284 (335)
T 3n28_A 229 -----SGK------------------L-TGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGV 284 (335)
T ss_dssp -----TTE------------------E-EEEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred -----CCe------------------e-eeeecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 000 0 00000 01123456655554433 3478999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccchh
Q 001304 768 GISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
+| +....++..||+++...++
T Consensus 285 a~--~~~~~~~~~a~~v~~~~~l 305 (335)
T 3n28_A 285 AY--HAKPKVEAKAQTAVRFAGL 305 (335)
T ss_dssp EE--SCCHHHHTTSSEEESSSCT
T ss_pred Ee--CCCHHHHhhCCEEEecCCH
Confidence 99 4445577899998854333
No 37
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=98.69 E-value=5.7e-08 Score=106.11 Aligned_cols=173 Identities=11% Similarity=0.136 Sum_probs=102.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC-C--CC--------CCeEEEecCCcHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EP--------KGQLLSIDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~-~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1104)
.+.+.+.++|++ +++|++++++|||....+..+...+|+.. + .. .+.++.....+.+.+.+.++ .+.
T Consensus 19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~-~~~ 96 (268)
T 1nf2_A 19 EISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIE-YIK 96 (268)
T ss_dssp CCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHHHH-HHG
T ss_pred ccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEEecCCCHHHHHHHHH-HHH
Confidence 466778999999 99999999999999999999999998743 1 00 11122222222233322222 221
Q ss_pred Hccc----cCC------------------------------------CCCceEEEEcchhHHHHHHHHHHHHH-hHhhhc
Q 001304 682 TMRI----TTS------------------------------------EPKDVAFVVDGWALEIALKHYRKAFT-ELAILS 720 (1104)
Q Consensus 682 ~~~~----~~~------------------------------------~~~~~~lvi~g~~l~~~~~~~~~~f~-~l~~~~ 720 (1104)
.... ... ...++.+..+...++.+.+.+.+.+. .+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (268)
T 1nf2_A 97 PLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFK 176 (268)
T ss_dssp GGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred hCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 1100 000 00001111111122222222222221 111111
Q ss_pred cceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 721 ~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
...-+.+++|. .|+..++.+.+ ..+.++++||+.||++|++.|++|++| |++...++..||+++.+.
T Consensus 177 s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 177 SFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTN 249 (268)
T ss_dssp EETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred ecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-cCCCHHHHhhCCEEEccC
Confidence 22234577776 79988887765 236799999999999999999999999 777777788899998753
No 38
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=98.67 E-value=5.4e-08 Score=97.58 Aligned_cols=97 Identities=21% Similarity=0.108 Sum_probs=76.2
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+++.|+++|+++.++||++...+..++..+|+...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~--------------------------------------------- 73 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL--------------------------------------------- 73 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE---------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe---------------------------------------------
Confidence 89999999999999999999999999999998321
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
+... +.|...++.+.+ ..+.++++||+.||++|.+.|++++++ ++....
T Consensus 74 ------------------------~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~ 126 (164)
T 3e8m_A 74 ------------------------FQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP-ASAPFY 126 (164)
T ss_dssp ------------------------ECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC-TTSCHH
T ss_pred ------------------------eccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc-CChHHH
Confidence 1111 334444443332 346899999999999999999999999 666667
Q ss_pred Hhhhcceecccch
Q 001304 777 AARAADYSIGKFR 789 (1104)
Q Consensus 777 a~~~AD~vl~~f~ 789 (1104)
+++.||+++.+.+
T Consensus 127 ~~~~ad~v~~~~~ 139 (164)
T 3e8m_A 127 IRRLSTIFLEKRG 139 (164)
T ss_dssp HHTTCSSCCCCCT
T ss_pred HHHhCcEEeccCC
Confidence 7789999998733
No 39
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=98.66 E-value=2.7e-08 Score=106.69 Aligned_cols=164 Identities=13% Similarity=0.158 Sum_probs=94.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc-CCCCCCCCCeEEEecCCc------H--HHHHH-HHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-NFISPEPKGQLLSIDGKT------E--DEVCR-SLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~-gi~~~~~~~~~~~~~~~~------~--~~~~~-~~~~~~~~ 682 (1104)
.+.+.+.++|++|+++| +++++|||....+..+...+ .++.. ++..+..+|.. . ..+.. ......+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~--nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 99 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICY--HGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSW 99 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEG--GGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEE--CCEEEeeCCeeeecccccccchhhHHHHHHHHHH
Confidence 46788999999999999 99999999999988877654 11111 12223333333 1 11111 11111111
Q ss_pred ccccCC---CCCceEEEEc--------chhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHhcCCeEEE
Q 001304 683 MRITTS---EPKDVAFVVD--------GWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLA 749 (1104)
Q Consensus 683 ~~~~~~---~~~~~~lvi~--------g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~ 749 (1104)
...... ......+... ...++.+.+.+.+. ..+. ......+.+++|. +|+..++.+.+.-. |++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~-~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via 176 (239)
T 1u02_A 100 VSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVE-TYYGKMIIELRVPGVNKGSAIRSVRGERP-AII 176 (239)
T ss_dssp HHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCE-EEECSSEEEEECTTCCHHHHHHHHHTTSC-EEE
T ss_pred HhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcE-EEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEE
Confidence 100000 0001111110 01122222222221 1221 1223345678887 79999999987433 999
Q ss_pred EcCCccChhhhhhc--CceEEecCCchHHHhhhcceeccc
Q 001304 750 IGDGGNDVRMIQKA--DIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 750 iGDG~ND~~ml~~A--dvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
+||+.||.+||+.| ++||+| ||+ +..||+++.+
T Consensus 177 ~GD~~ND~~Ml~~a~~g~~vam-~Na----~~~A~~v~~~ 211 (239)
T 1u02_A 177 AGDDATDEAAFEANDDALTIKV-GEG----ETHAKFHVAD 211 (239)
T ss_dssp EESSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESS
T ss_pred EeCCCccHHHHHHhhCCcEEEE-CCC----CCcceEEeCC
Confidence 99999999999999 999999 775 5689998866
No 40
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=98.62 E-value=6.1e-08 Score=104.20 Aligned_cols=168 Identities=15% Similarity=0.243 Sum_probs=100.6
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH-------HHHHH---------HHHHHH
Q 001304 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE-------DEVCR---------SLERVL 680 (1104)
Q Consensus 617 ~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~-------~~~~~---------~~~~~~ 680 (1104)
.+.++|++++ +|++++++|||+...+..+..++++..++ .++..+|... .+... .+....
T Consensus 23 ~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~---~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (244)
T 1s2o_A 23 HLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPD---YWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIA 98 (244)
T ss_dssp HHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCS---EEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCC---EEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHH
Confidence 4556777755 68999999999999999999998874321 1333343221 11111 111111
Q ss_pred HHccc---c---CCCCCceEEEEcchhHHHHHHHHHHHHHh----HhhhccceeeeccChh--hHHHHHHHHHhc----C
Q 001304 681 LTMRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC----D 744 (1104)
Q Consensus 681 ~~~~~---~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~----l~~~~~~~i~~r~sP~--qK~~iV~~lk~~----~ 744 (1104)
..... . .....+..+..+........+.+.+.+.. +....+...+.+++|. .|+..++.+.+. .
T Consensus 99 ~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~ 178 (244)
T 1s2o_A 99 DGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEP 178 (244)
T ss_dssp HTCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCG
T ss_pred HhccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCH
Confidence 11110 0 11122333443433322333334443332 2111222345677887 699988887752 3
Q ss_pred CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhh-------cceecccch
Q 001304 745 YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA-------ADYSIGKFR 789 (1104)
Q Consensus 745 ~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~-------AD~vl~~f~ 789 (1104)
+.++++||+.||.+|++.|++||+| |++...++.. ||++..+..
T Consensus 179 ~~~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~~a~~~~~~a~~v~~~~~ 229 (244)
T 1s2o_A 179 SQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGDSRHYRAQSSH 229 (244)
T ss_dssp GGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCCTTEEECSSCH
T ss_pred HHEEEECCchhhHHHHhccCcEEEE-cCCcHHHHHHHhcccccceeecCCcc
Confidence 5799999999999999999999999 7877777774 789887543
No 41
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=98.59 E-value=2.7e-07 Score=101.89 Aligned_cols=65 Identities=25% Similarity=0.208 Sum_probs=52.8
Q ss_pred eeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 724 ICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
-+.+++|. +|+..++.+.+. .+.++++||+.||++|++.|++||+| +++..+++..||+++.+.+
T Consensus 206 ~~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~~~~~~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 206 HNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTND 276 (288)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCGG
T ss_pred CcEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEE-cCCCHHHHhhCceeecCCC
Confidence 34566666 698888877752 35799999999999999999999999 7777778888999987543
No 42
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=98.59 E-value=1.2e-07 Score=101.04 Aligned_cols=174 Identities=17% Similarity=0.204 Sum_probs=101.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEecCC-----cHHHHHHHHHHHHHHc-
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK-----TEDEVCRSLERVLLTM- 683 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~- 683 (1104)
..+.+.+.+++++++++|++++++||+....+..+...+|+..+ ..++..+..++. ..+...+.++...+..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 34678889999999999999999999999999999998886321 000111111111 1122222222221021
Q ss_pred cccCCC-----CCceEEEEc-chhHHHHHHHHHHHHHh-HhhhccceeeeccChh--hHHHHHHHHHh----cCCeEEEE
Q 001304 684 RITTSE-----PKDVAFVVD-GWALEIALKHYRKAFTE-LAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAI 750 (1104)
Q Consensus 684 ~~~~~~-----~~~~~lvi~-g~~l~~~~~~~~~~f~~-l~~~~~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~i 750 (1104)
...... ..... +.+ +..-+. .+...+.+.. +... ....+.++.|. .|...++.+.+ ..+.++++
T Consensus 99 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~i 175 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLV-IMRETINVET-VREIINELNLNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV 175 (231)
T ss_dssp TCCBCTTGGGCSSCEE-ECTTTSCHHH-HHHHHHHTTCSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEE
T ss_pred CceEEecCCCceeeEE-EECCCCCHHH-HHHHHHhcCCcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEE
Confidence 111000 01122 222 111111 1222222211 1111 12234456554 68888887664 23679999
Q ss_pred cCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 751 GDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
||+.||++|++.|++|++| ++...+++..||+++.+.+
T Consensus 176 GD~~nD~~~~~~ag~~v~~-~~~~~~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 176 GDGENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKEY 213 (231)
T ss_dssp ECSGGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSCH
T ss_pred CCCHHHHHHHHHcCCeEEe-cCCCHHHHhhCCEEecCCC
Confidence 9999999999999999999 7766677778999987643
No 43
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=98.56 E-value=1e-07 Score=102.82 Aligned_cols=166 Identities=13% Similarity=0.085 Sum_probs=95.9
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCC---------------------eEEEecCCcHHHH
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG---------------------QLLSIDGKTEDEV 672 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~---------------------~~~~~~~~~~~~~ 672 (1104)
+.+.++|++|+++|++++++||+....+..+...+|+..+ ..++ .++.....+.+.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 99 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKI 99 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CCCCCCEEECSCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcccccccccccCceEEEecCCCHHHH
Confidence 4499999999999999999999999999999998886321 0111 1122222233333
Q ss_pred HHHHHHHHHH-----cc------------ccCC-------CCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc
Q 001304 673 CRSLERVLLT-----MR------------ITTS-------EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV 728 (1104)
Q Consensus 673 ~~~~~~~~~~-----~~------------~~~~-------~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~ 728 (1104)
...++...+. .. .... ......++..+..-. .+.+.+ + .+.... ..-+.++
T Consensus 100 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~-~-~~~~~~-s~~~~ei 174 (249)
T 2zos_A 100 REELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGW--EEVLVE-G-GFKVTM-GSRFYTV 174 (249)
T ss_dssp HHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSSCH--HHHHHH-T-TCEEEE-CSSSEEE
T ss_pred HHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCHHH--HHHHHh-C-CEEEEe-cCCeEEE
Confidence 3222221111 00 0000 000111222221111 111111 1 111111 1224566
Q ss_pred Ch-hhHHHHHHHHHhc-----CCeEEEEcCCccChhhhhhcCceEEecCCch-HHHhhhcceeccc
Q 001304 729 TP-SQKAQLVELLKSC-----DYRTLAIGDGGNDVRMIQKADIGVGISGREG-LQAARAADYSIGK 787 (1104)
Q Consensus 729 sP-~qK~~iV~~lk~~-----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~-~~a~~~AD~vl~~ 787 (1104)
+| .+|+..++.+.+. .+.|+++|||.||++||+.|++||+| |++. ..++..||+++.+
T Consensus 175 ~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~-gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCCTTEEEESSHHHHH
T ss_pred eCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe-CCCCccccchhceEEecc
Confidence 66 3499888877642 35799999999999999999999999 7765 4566688988765
No 44
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=98.49 E-value=3.3e-07 Score=94.21 Aligned_cols=96 Identities=17% Similarity=0.098 Sum_probs=73.8
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+|+.|+++|+++.++||++...+..+++.+|+...
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~--------------------------------------------- 95 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL--------------------------------------------- 95 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE---------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee---------------------------------------------
Confidence 89999999999999999999999999999887310
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
+.. .+.|...++.+.+ . .+.+++|||+.||++|.+.|++++++ ++....
T Consensus 96 ------------------------~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~~~ 148 (188)
T 2r8e_A 96 ------------------------YQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAHPL 148 (188)
T ss_dssp ------------------------ECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCTT
T ss_pred ------------------------ecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcCHH
Confidence 001 1234444444332 2 36799999999999999999999998 555555
Q ss_pred Hhhhcceecccc
Q 001304 777 AARAADYSIGKF 788 (1104)
Q Consensus 777 a~~~AD~vl~~f 788 (1104)
++..||+++.+.
T Consensus 149 ~~~~ad~v~~~~ 160 (188)
T 2r8e_A 149 LIPRADYVTRIA 160 (188)
T ss_dssp TGGGSSEECSSC
T ss_pred HHhcCCEEEeCC
Confidence 666899999875
No 45
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=98.48 E-value=3.1e-07 Score=95.53 Aligned_cols=120 Identities=23% Similarity=0.297 Sum_probs=81.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.++++++++.++++|+++.++||+....+..+...+|+...-.. .....
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------------------- 126 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVK--------------------------- 126 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEE---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEe--eeEEE---------------------------
Confidence 5678999999999999999999999998888888888776210000 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-cChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
++ .. ...+... ..+..|...+..+.+ . .+.++++||+.||++|++.|++++
T Consensus 127 -----~~------------------~~-~~~~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~ 182 (211)
T 1l7m_A 127 -----DG------------------KL-TGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI 182 (211)
T ss_dssp -----TT------------------EE-EEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred -----CC------------------EE-cCCcccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEE
Confidence 00 00 0011111 123567766665543 2 357999999999999999999999
Q ss_pred EecCCchHHHhhhcceeccc
Q 001304 768 GISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~ 787 (1104)
+| + .....+..||+++.+
T Consensus 183 ~~-~-~~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 183 AF-C-AKPILKEKADICIEK 200 (211)
T ss_dssp EE-S-CCHHHHTTCSEEECS
T ss_pred EE-C-CCHHHHhhcceeecc
Confidence 99 4 334566789999876
No 46
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=98.45 E-value=9.2e-07 Score=96.79 Aligned_cols=171 Identities=14% Similarity=0.196 Sum_probs=91.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC-C--CCCCeEEEecC--C------------cHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSIDG--K------------TEDEVCRS 675 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~-~--~~~~~~~~~~~--~------------~~~~~~~~ 675 (1104)
.+.+.+.++|++|+++|++++++||+....+..+..++++.. + ..++..+..++ . +.+.+...
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i 105 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLV 105 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHH
Confidence 455779999999999999999999999999999999998743 1 11122332122 1 11222222
Q ss_pred HHHHHHHcc--c--c-C---------------------CCCCceEEEEcc--hhHHHHHHHHHHHHHhHhhhccceeeec
Q 001304 676 LERVLLTMR--I--T-T---------------------SEPKDVAFVVDG--WALEIALKHYRKAFTELAILSRTAICCR 727 (1104)
Q Consensus 676 ~~~~~~~~~--~--~-~---------------------~~~~~~~lvi~g--~~l~~~~~~~~~~f~~l~~~~~~~i~~r 727 (1104)
++...+... . . . .......++..+ +.++.+.+.+.+ + .+.... ...+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~~~le 182 (275)
T 1xvi_A 106 LNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNE-L-GLQFMQ-GARFWH 182 (275)
T ss_dssp HHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHH-T-TEEEEE-CSSCEE
T ss_pred HHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHh-h-CeEEEE-CCceEE
Confidence 221111100 0 0 0 001111233322 222222222221 1 111111 233567
Q ss_pred cChh--hHHHHHHHHHh-----cCCe--EEEEcCCccChhhhhhcCceEEecCCch---HHHhhh--cc-eeccc
Q 001304 728 VTPS--QKAQLVELLKS-----CDYR--TLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--AD-YSIGK 787 (1104)
Q Consensus 728 ~sP~--qK~~iV~~lk~-----~~~~--v~~iGDG~ND~~ml~~AdvGIam~g~~~---~~a~~~--AD-~vl~~ 787 (1104)
++|. +|+..++.+.+ ..+. ++++||+.||.+|++.|++||+| ++.. .+++.. || ++..+
T Consensus 183 I~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~~~~~~a~~~v~~~ 256 (275)
T 1xvi_A 183 VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV-KGLNREGVHLHDEDPARVWRTQR 256 (275)
T ss_dssp EEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC-CCCC-------------------
T ss_pred EecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe-cCCCccchhhccccCCceeEccC
Confidence 7887 69887776653 2345 99999999999999999999999 6654 445443 78 77754
No 47
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.43 E-value=4.1e-07 Score=95.27 Aligned_cols=124 Identities=16% Similarity=0.211 Sum_probs=86.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|+++|+++.++|+.....+..+...+|+...-.. ++..+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--~~~~~~------------------------- 126 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSN--TLIVEN------------------------- 126 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEET-------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccc--eeEEeC-------------------------
Confidence 45899999999999999999999999999999999999887321100 110000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc-ChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCce
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
+ .....+...+ ..+.|..+++.+.+ ..+.++++||+.||++|++.|+++
T Consensus 127 -------~-------------------~~~~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~ 180 (217)
T 3m1y_A 127 -------D-------------------ALNGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIK 180 (217)
T ss_dssp -------T-------------------EEEEEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEE
T ss_pred -------C-------------------EEEeeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCe
Confidence 0 0000011111 23456666665543 346799999999999999999999
Q ss_pred EEecCCchHHHhhhcceecccchh
Q 001304 767 VGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 767 Iam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++| +...+.+..||+++.+.++
T Consensus 181 ~~~--~~~~~l~~~ad~v~~~~dl 202 (217)
T 3m1y_A 181 IAF--NAKEVLKQHATHCINEPDL 202 (217)
T ss_dssp EEE--SCCHHHHTTCSEEECSSBG
T ss_pred EEE--CccHHHHHhcceeecccCH
Confidence 999 4455677899999986544
No 48
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.40 E-value=1e-07 Score=98.37 Aligned_cols=118 Identities=25% Similarity=0.344 Sum_probs=87.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|++++++||+....+..+ ..+|+... .. .+...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~--~~~~~--------------------------- 127 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN--RAIFE--------------------------- 127 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE--EEEEE---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee--eEEee---------------------------
Confidence 7899999999999999999999999988877777 77775211 00 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
++ ........|..|+..++.+ ..+.++++||+.||++|++.|++||+| ++
T Consensus 128 -----~~----------------------~~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~-~~ 177 (201)
T 4ap9_A 128 -----DG----------------------KFQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAV-GR 177 (201)
T ss_dssp -----TT----------------------EEEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEE-SS
T ss_pred -----CC----------------------ceECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEE-CC
Confidence 00 0001345667898888888 567899999999999999999999999 55
Q ss_pred chHHHhhhcceecccchhhHHHH
Q 001304 773 EGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 773 ~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
... .||+++.+++.+..++
T Consensus 178 ~~~----~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 178 EIP----GADLLVKDLKELVDFI 196 (201)
T ss_dssp CCT----TCSEEESSHHHHHHHH
T ss_pred CCc----cccEEEccHHHHHHHH
Confidence 543 8999999877765543
No 49
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.39 E-value=4.7e-07 Score=94.16 Aligned_cols=126 Identities=17% Similarity=0.143 Sum_probs=88.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 115 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE---------------------------------- 115 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG----------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc----------------------------------
Confidence 5679999999999999999999999999988888888887321100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc-ChhhHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCc-e
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADI-G 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-sP~qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-G 766 (1104)
...+.++. ..+-|.. +.+.+.-..+.+++|||+.||+.|.+.|++ +
T Consensus 116 ----------------------------~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~ 167 (205)
T 3m9l_A 116 ----------------------------ADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRT 167 (205)
T ss_dssp ----------------------------GGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred ----------------------------ceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEE
Confidence 00111111 0111222 233332234679999999999999999999 9
Q ss_pred EEecCCchHHHhhhcceecccchhhHHHHHhhhhh
Q 001304 767 VGISGREGLQAARAADYSIGKFRFLKRLILVHGRY 801 (1104)
Q Consensus 767 Iam~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~ 801 (1104)
|+| ++.....+..||+++.+++.|..++=.+++.
T Consensus 168 i~v-~~~~~~~~~~ad~v~~~~~el~~~~~~~~~~ 201 (205)
T 3m9l_A 168 VLV-NLPDNPWPELTDWHARDCAQLRDLLSAEGHH 201 (205)
T ss_dssp EEC-SSSSCSCGGGCSEECSSHHHHHHHHHHTTCC
T ss_pred EEE-eCCCCcccccCCEEeCCHHHHHHHHHhcccc
Confidence 999 6655556678999999988877665334443
No 50
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.39 E-value=7e-07 Score=100.65 Aligned_cols=163 Identities=11% Similarity=0.127 Sum_probs=95.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCc------HHHHHHHHHHHHHHcccc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT------EDEVCRSLERVLLTMRIT 686 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 686 (1104)
.+++++.++++.|++ |+.+.++||+....+..++...++... +.. +... .++....+... .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~k~~~~~-~----- 169 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE-----LHG-TEVDFDSIAVPEGLREELLSI-I----- 169 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE-----EEE-EBCCGGGCCCCHHHHHHHHHH-H-----
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh-----hcc-cccchhhhccccccceeEEec-C-----
Confidence 468999999999999 999999999987666677777776311 111 1000 01111000000 0
Q ss_pred CCCCCceEEEEcchhHHHHH-HHHHHHHHhHhhhccc-eeeec--cC--hhhHHHHHHHHHhcC--CeEEEEcCCccChh
Q 001304 687 TSEPKDVAFVVDGWALEIAL-KHYRKAFTELAILSRT-AICCR--VT--PSQKAQLVELLKSCD--YRTLAIGDGGNDVR 758 (1104)
Q Consensus 687 ~~~~~~~~lvi~g~~l~~~~-~~~~~~f~~l~~~~~~-~i~~r--~s--P~qK~~iV~~lk~~~--~~v~~iGDG~ND~~ 758 (1104)
...+.... +.+ +.+.++ ..... ..+.+ .. +.+|+..++.+.... +.|+++|||.||++
T Consensus 170 ------------~~~~~~~~~~~l-~~~~~~-~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ 235 (332)
T 1y8a_A 170 ------------DVIASLSGEELF-RKLDEL-FSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYK 235 (332)
T ss_dssp ------------HHHHHCCHHHHH-HHHHHH-HHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHH
T ss_pred ------------HHHHhhhhHHHH-HHHHHH-HhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHH
Confidence 00000000 011 111111 11110 11221 23 458999888665432 45999999999999
Q ss_pred hhhhc----CceEEecCCchHHHhhhcceecccchh------hHHHHHhhhhhhhhhh
Q 001304 759 MIQKA----DIGVGISGREGLQAARAADYSIGKFRF------LKRLILVHGRYSYNRT 806 (1104)
Q Consensus 759 ml~~A----dvGIam~g~~~~~a~~~AD~vl~~f~~------l~~lll~~GR~~~~~i 806 (1104)
|++.| ++||+| ++...++..||+++.+.+. +..+ +..||..+ ++
T Consensus 236 ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~~~~~~~-~~ 289 (332)
T 1y8a_A 236 MFEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELF-MERKERAF-EV 289 (332)
T ss_dssp HHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHH-HHHGGGGG-GG
T ss_pred HHHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHH-HHcCCchh-HH
Confidence 99999 999999 5566788899999875322 3333 47888877 54
No 51
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=98.37 E-value=6.5e-07 Score=97.16 Aligned_cols=63 Identities=32% Similarity=0.470 Sum_probs=51.0
Q ss_pred ccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchh
Q 001304 727 RVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 727 r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++.|. .|+..++.+.+ ..+.++++||+.||++|++.|++|++| ++....++..||+++.+.+.
T Consensus 180 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 180 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDE 248 (261)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGG
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEeccCch
Confidence 44554 68887777654 236799999999999999999999999 77777788899999986554
No 52
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.37 E-value=1.7e-06 Score=93.74 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=93.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEE-------------------ecCCcHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-------------------IDGKTEDE 671 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~-------------------~~~~~~~~ 671 (1104)
.+.+.+.++|++++++|++++++||+....+. .+|+..+ ..++..+. ......+.
T Consensus 16 ~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (259)
T 3zx4_A 16 GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYRVVSLAWPYRK 91 (259)
T ss_dssp SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTCCSSEEEGGGTEEEEETTCSSCCSEEETTEEEEECSCCHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCCCCcEEEECCcEEEeCCCCcccccccCCceEEEEcCCCHHH
Confidence 57789999999999999999999999998876 6665321 00111121 11222333
Q ss_pred HHHHHHHHHHHccc-----c---------------------CCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceee
Q 001304 672 VCRSLERVLLTMRI-----T---------------------TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC 725 (1104)
Q Consensus 672 ~~~~~~~~~~~~~~-----~---------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~ 725 (1104)
+...++...+.... . ........+++....++.+.+.+.+. .+....... +
T Consensus 92 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~s~~-~ 168 (259)
T 3zx4_A 92 VRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVLEALEAV--GLEWTHGGR-F 168 (259)
T ss_dssp HHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHHHHHHHHHHT--TCEEEECSS-S
T ss_pred HHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHHHHHHHHHHC--CcEEEecCc-e
Confidence 33333322211100 0 00011111111111233332222221 121111121 2
Q ss_pred eccCh-hhHHHHHHHHHhc-C-----CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 726 CRVTP-SQKAQLVELLKSC-D-----YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 726 ~r~sP-~qK~~iV~~lk~~-~-----~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.++.| .+|+..++.+.+. | +.++++||+.||.+|++.|++||+| +|+.. + .|+++..+
T Consensus 169 ~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~-~--~~~~~~~~ 233 (259)
T 3zx4_A 169 YHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV-GRGDP-P--EGVLATPA 233 (259)
T ss_dssp EEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC-SSSCC-C--TTCEECSS
T ss_pred EEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe-CChhh-c--CCcEEeCC
Confidence 34444 4899988887652 3 7799999999999999999999999 77665 3 67888764
No 53
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.36 E-value=7.5e-07 Score=93.04 Aligned_cols=131 Identities=19% Similarity=0.234 Sum_probs=87.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.++++.|+++|+++.++||.....+..+.+..|+.... ++..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~----~~~~----------------------------- 129 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN----IFAV----------------------------- 129 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG----EEEE-----------------------------
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc----EEEe-----------------------------
Confidence 7899999999999999999999999999999999999873211 1100
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-HhcCCeEEEEcCCccChhhhhh----cCceEE
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQK----ADIGVG 768 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~~~~~v~~iGDG~ND~~ml~~----AdvGIa 768 (1104)
.++.+... ..........+|..|...+... .-..+.++++||+.||++|++. +.+|++
T Consensus 130 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~ 192 (219)
T 3kd3_A 130 ETIWNSDG-----------------SFKELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYM 192 (219)
T ss_dssp EEEECTTS-----------------BEEEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEEC
T ss_pred eeeecCCC-----------------ceeccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEecc
Confidence 00000000 0000122234555666655544 3356789999999999999975 344445
Q ss_pred ecCCchHHHhhhcceecccchhhHHHH
Q 001304 769 ISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 769 m~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+ ++.....+..||+++.+++.+..++
T Consensus 193 ~-~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 193 E-HIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp S-SCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred C-ccccHHHHhhcceeeCCHHHHHHhh
Confidence 4 4555556678999999887776654
No 54
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.32 E-value=1.6e-06 Score=100.89 Aligned_cols=123 Identities=22% Similarity=0.306 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|+++|+++.++||.....+..+++.+|+...-.. .+...+|.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~-~l~~~dg~------------------------- 309 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAAN-ELEIVDGT------------------------- 309 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEE-CEEEETTE-------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeee-eEEEeCCE-------------------------
Confidence 7899999999999999999999999999999999999998321000 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee-ccChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
++ ..+.. -..++.|..+++.+.+ . .+.++++|||.||++|++.|++|+
T Consensus 310 ----~t-----------------------g~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~v 362 (415)
T 3p96_A 310 ----LT-----------------------GRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGI 362 (415)
T ss_dssp ----EE-----------------------EEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ----EE-----------------------eeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeE
Confidence 00 00111 1235667777766554 2 367999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccchh
Q 001304 768 GISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++ +....++..||+++...+.
T Consensus 363 a~--~~~~~~~~~ad~~i~~~~l 383 (415)
T 3p96_A 363 AF--NAKPALREVADASLSHPYL 383 (415)
T ss_dssp EE--SCCHHHHHHCSEEECSSCT
T ss_pred EE--CCCHHHHHhCCEEEccCCH
Confidence 99 3445577799999875443
No 55
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.32 E-value=1.1e-06 Score=93.49 Aligned_cols=120 Identities=23% Similarity=0.187 Sum_probs=85.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 148 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLT---------------------------------- 148 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCS----------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhee----------------------------------
Confidence 3578999999999999999999999999988888888888632211
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhH----HHHHHHHHhcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK----~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..++++..+ +.| ..+.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 149 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 198 (237)
T 4ex6_A 149 ------------------------------VIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGM 198 (237)
T ss_dssp ------------------------------EEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTC
T ss_pred ------------------------------eEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 111111111 112 23344443345789999999999999999999
Q ss_pred ---eEEecCCchHHHhh-hcceecccchhhHHHH
Q 001304 766 ---GVGISGREGLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 ---GIam~g~~~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+|++..+...+.+. .||+++.++..+..++
T Consensus 199 ~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 199 TVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV 232 (237)
T ss_dssp EEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHH
T ss_pred eEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 88883244345555 7999999888776653
No 56
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=98.26 E-value=1.6e-06 Score=94.14 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=52.1
Q ss_pred eeccChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcC-ceEEecCCchHHHhhhcceeccc
Q 001304 725 CCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
+.+++|. +|+..++.+.. ..+.|+++|| |.||.+||+.|+ +|++| +|+...+++.||++...
T Consensus 188 ~leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 188 SFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp CEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTT
T ss_pred EEEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCC
Confidence 4677776 69999999811 2468999999 999999999999 59999 99988899899998764
No 57
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=98.24 E-value=1.7e-06 Score=91.00 Aligned_cols=119 Identities=18% Similarity=0.235 Sum_probs=86.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 3578999999999999999999999999888888888888732111
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHH----hcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk----~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..++++..+ +.|..+++.+. -..+.+++|||+.||+.|.+.|++
T Consensus 131 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~ 180 (226)
T 3mc1_A 131 ------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNL 180 (226)
T ss_dssp ------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred ------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCC
Confidence 111222222 23444444333 234689999999999999999999
Q ss_pred ---eEEecCCchHHH--hhhcceecccchhhHHHH
Q 001304 766 ---GVGISGREGLQA--ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 ---GIam~g~~~~~a--~~~AD~vl~~f~~l~~ll 795 (1104)
+|++ |+...+. +..||+++.++..+..++
T Consensus 181 ~~i~v~~-g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 181 PSIGVTY-GFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp CEEEESS-SSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred CEEEEcc-CCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 7776 5543333 358999999988887765
No 58
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=98.23 E-value=3.5e-06 Score=88.36 Aligned_cols=118 Identities=11% Similarity=0.051 Sum_probs=81.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.+++.|++++++|+.....+..+....|+...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----------------------------------- 138 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----------------------------------- 138 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc-----------------------------------
Confidence 457899999999999999999999999888777777777632111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccC------hhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT------PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~s------P~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
..+++... |.--..+.+.+.-..+.+++|||+.||++|++.|+++
T Consensus 139 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~ 189 (226)
T 1te2_A 139 -----------------------------ALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMR 189 (226)
T ss_dssp -----------------------------EEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred -----------------------------EEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCE
Confidence 11111111 1112233344433456799999999999999999999
Q ss_pred EEecCC---chHHHhhhcceecccchhhHHH
Q 001304 767 VGISGR---EGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 767 Iam~g~---~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+++-.. .....+..||+++.+++.+..-
T Consensus 190 ~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 190 SIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp EEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred EEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 988322 2223456899999887766443
No 59
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=98.21 E-value=1.1e-06 Score=94.28 Aligned_cols=61 Identities=21% Similarity=0.238 Sum_probs=47.9
Q ss_pred cceeeeccChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhhcC-ceEEecCCchHHHhhhcc
Q 001304 721 RTAICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAAD 782 (1104)
Q Consensus 721 ~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~AD 782 (1104)
+...+.+++|. +|+..++.|.+..+.|+++|| |.||.+||+.|+ +|++| ++....++..++
T Consensus 174 sg~~~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v-~n~~~~~~~~~~ 241 (246)
T 3f9r_A 174 GGQISFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV-TSYKDTIAEVEK 241 (246)
T ss_dssp ETTTEEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC-SSHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEe-CCHHHHHHHHHH
Confidence 34456788887 799999988776678999999 799999999996 89999 776555544443
No 60
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=98.19 E-value=4.1e-06 Score=93.33 Aligned_cols=119 Identities=16% Similarity=0.221 Sum_probs=82.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||.....+..+++.+|+...-.. .+..++
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~--~l~~~d-------------------------- 230 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSN--TVEIRD-------------------------- 230 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--CEEEET--------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEE--EEEeeC--------------------------
Confidence 4899999999999999999999999999999999999998321000 000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee-ccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
| .....+.. -..++.|..+++.+.+ ..+.+++|||+.||++|.+.|++|+
T Consensus 231 ------g-------------------~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~v 285 (317)
T 4eze_A 231 ------N-------------------VLTDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGI 285 (317)
T ss_dssp ------T-------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ------C-------------------eeeeeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeE
Confidence 0 00000111 1134556666555433 3467999999999999999999999
Q ss_pred EecCCchHHHhhhcceecc
Q 001304 768 GISGREGLQAARAADYSIG 786 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~ 786 (1104)
++ + .....+..||.++.
T Consensus 286 a~-~-~~~~~~~~a~~~i~ 302 (317)
T 4eze_A 286 AW-K-AKPVVREKIHHQIN 302 (317)
T ss_dssp EE-S-CCHHHHHHCCEEES
T ss_pred Ee-C-CCHHHHHhcCeeeC
Confidence 99 3 34446668888775
No 61
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=98.19 E-value=2.6e-06 Score=85.00 Aligned_cols=105 Identities=18% Similarity=0.143 Sum_probs=77.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.++++.|+++|+++.++||+....+..+.+.+|+.. .+++
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------~~~~--------------------------- 81 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------IYTG--------------------------- 81 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------EEEC---------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------hccC---------------------------
Confidence 34567899999999999999999999999999999998721 1110
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHH----HHHHhcCCeEEEEcCCccChhhhhhcCceEEe
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV----ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV----~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
++.|...+ +.+.-..+.++++||+.||++|.+.|++++++
T Consensus 82 ------------------------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~ 125 (162)
T 2p9j_A 82 ------------------------------------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAV 125 (162)
T ss_dssp ------------------------------------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ------------------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEe
Confidence 11222222 22222346799999999999999999999988
Q ss_pred cCCchHHHhhhcceecccchh
Q 001304 770 SGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++.....+..||+++.+.+.
T Consensus 126 -~~~~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 126 -RNAVEEVRKVAVYITQRNGG 145 (162)
T ss_dssp -TTSCHHHHHHCSEECSSCSS
T ss_pred -cCccHHHHhhCCEEecCCCC
Confidence 45455566789999986543
No 62
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=98.17 E-value=4.5e-06 Score=88.33 Aligned_cols=112 Identities=16% Similarity=0.120 Sum_probs=74.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+... +..+...+|+...-.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~----------------------------------- 134 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH----------------------------------- 134 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS-----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC-----------------------------------
Confidence 4789999999999999999999999754 667777888743211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH------HHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK------~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
..++++..+..| ..+.+.+.-..+.+++|||+.||+.|.+.|+++
T Consensus 135 -----------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~ 185 (233)
T 3nas_A 135 -----------------------------AIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMF 185 (233)
T ss_dssp -----------------------------EECCC---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCE
T ss_pred -----------------------------EEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCE
Confidence 011111111112 233444443457899999999999999999999
Q ss_pred EEecCCchHHHhhhcceecccchhhH
Q 001304 767 VGISGREGLQAARAADYSIGKFRFLK 792 (1104)
Q Consensus 767 Iam~g~~~~~a~~~AD~vl~~f~~l~ 792 (1104)
++| .+...+.+ .||+++.++..+.
T Consensus 186 ~~~-~~~~~~~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 186 AVG-VGQGQPML-GADLVVRQTSDLT 209 (233)
T ss_dssp EEE-CC--------CSEECSSGGGCC
T ss_pred EEE-ECCccccc-cCCEEeCChHhCC
Confidence 999 55554444 8999998877664
No 63
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=98.16 E-value=2.6e-06 Score=91.50 Aligned_cols=59 Identities=17% Similarity=0.175 Sum_probs=47.9
Q ss_pred eeccChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcCc-eEEecCCchHHHhhhccee
Q 001304 725 CCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKADI-GVGISGREGLQAARAADYS 784 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Adv-GIam~g~~~~~a~~~AD~v 784 (1104)
+.+++|. +|+..++.+.. ..+.|+++|| |.||.+||+.|+. |++| ||+..++++.||+|
T Consensus 179 ~leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av-~Na~~~vk~~A~~v 245 (246)
T 2amy_A 179 SFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TAPEDTRRICELLF 245 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SSHHHHHHHHHHHC
T ss_pred EEEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe-eCCCHHHHHHHhhc
Confidence 4577776 69988888811 2468999999 9999999999988 9999 99988899999987
No 64
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=98.12 E-value=4.2e-06 Score=86.95 Aligned_cols=118 Identities=16% Similarity=0.142 Sum_probs=83.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 84 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~~f~----------------------------------- 128 (216)
T 2pib_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFD----------------------------------- 128 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHHhcC-----------------------------------
Confidence 578999999999999999999999999999999998888742211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc-
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI- 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv- 765 (1104)
..++++. .|+--..+.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 129 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~iGD~~~Di~~a~~aG~~ 179 (216)
T 2pib_A 129 -----------------------------VMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIE 179 (216)
T ss_dssp -----------------------------EEECGGGSSSCTTSTHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCC
T ss_pred -----------------------------EEeecccCCCCCcCcHHHHHHHHHcCCCCceEEEEeCcHHHHHHHHHcCCc
Confidence 1111111 1111223334443345779999999999999999999
Q ss_pred ----eEEecCCchHHHhhhcceecccchhhHHHH
Q 001304 766 ----GVGISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 ----GIam~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+|++ ++...+....||+++.+++.+..++
T Consensus 180 ~i~~~v~~-~~~~~~~~~~a~~~~~~~~el~~~l 212 (216)
T 2pib_A 180 RIYGVVHS-LNDGKALLEAGAVALVKPEEILNVL 212 (216)
T ss_dssp EEEEECCS-SSCCHHHHHTTCSEEECGGGHHHHH
T ss_pred EEehccCC-CCCchhhcchhheeeCCHHHHHHHH
Confidence 5555 4333333368999999988776654
No 65
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=98.10 E-value=1.9e-05 Score=77.36 Aligned_cols=141 Identities=16% Similarity=0.210 Sum_probs=88.6
Q ss_pred CCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHH
Q 001304 382 KTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEA 461 (1104)
Q Consensus 382 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~A 461 (1104)
..||+|-|++++..+...+. . +..+++...+.+. ..+++|...|
T Consensus 13 ~~~tit~gnr~vt~v~~~~g---------~--------------~e~elL~lAAs~E-------------~~SeHPla~A 56 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG---------V--------------DEKTLADAAQLAS-------------LADETPEGRS 56 (156)
T ss_dssp --------CEEEEEEEECTT---------S--------------CHHHHHHHHHHTT-------------SSCCSHHHHH
T ss_pred CCCceecCCCeEEEEEecCC---------C--------------CHHHHHHHHHHHh-------------CcCCCHHHHH
Confidence 46999999999998754210 0 1123333333322 1257999999
Q ss_pred HHHHHHhc-CcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC--C
Q 001304 462 LVHAAAQL-HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--Q 538 (1104)
Q Consensus 462 l~~~a~~~-g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~--~ 538 (1104)
++++|++. |........ . .....+|++..++..|.+ +| .-+.+|+++.|...+... .
T Consensus 57 Iv~~A~~~~~l~~~~~~~-----------~---~~~~~~F~a~~G~~Gv~v----~G--~~v~vGn~~~i~~l~~~~gi~ 116 (156)
T 1svj_A 57 IVILAKQRFNLRERDVQS-----------L---HATFVPFTAQSRMSGINI----DN--RMIRKGSVDAIRRHVEANGGH 116 (156)
T ss_dssp HHHHHHHHTTCCCCCHHH-----------H---TCEEEEEETTTTEEEEEE----TT--EEEEEEEHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCcccccc-----------c---ccceeeccccCCCCeEEE----CC--EEEEEeCcHHHHHHHHHcCCC
Confidence 99999876 653210000 0 012458888887777744 34 347899998777766432 2
Q ss_pred chhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCC
Q 001304 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 616 (1104)
Q Consensus 539 ~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~ 616 (1104)
.+..+.+.+++++.+|.+++++| .|..++|++++.|++|+
T Consensus 117 ~~~~~~~~~~~la~~G~T~v~VA--------------------------------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 117 FPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEEECCCC
T ss_pred CcHHHHHHHHHHHhCCCCEEEEE--------------------------------------ECCEEEEEEEEecCCCC
Confidence 23468888999999999999999 47789999999999986
No 66
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.08 E-value=5.7e-06 Score=86.64 Aligned_cols=118 Identities=16% Similarity=0.095 Sum_probs=78.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.+.++.+++.|+++.++|+.....+.......|+...-.
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~------------------------------------ 133 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD------------------------------------ 133 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS------------------------------------
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee------------------------------------
Confidence 46899999999999999999999999888888888877642211
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCceE
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
..++++..+. .|.. +.+.+.-..+.++++||+.||++|++.|++++
T Consensus 134 ----------------------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~ 185 (225)
T 3d6j_A 134 ----------------------------IIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSF 185 (225)
T ss_dssp ----------------------------EEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred ----------------------------eeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeE
Confidence 0011111111 1122 22333223467999999999999999999998
Q ss_pred EecCC---chHHHhhh-cceecccchhhHHHH
Q 001304 768 GISGR---EGLQAARA-ADYSIGKFRFLKRLI 795 (1104)
Q Consensus 768 am~g~---~~~~a~~~-AD~vl~~f~~l~~ll 795 (1104)
++-++ ...+.+.. ||+++.+.+.+..++
T Consensus 186 ~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 186 TGVTSGMTTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp EEETTSSCCTTGGGGSCCSEEESSGGGGC---
T ss_pred EEECCCCCChHHHhhcCCCEEECCHHHHHHhh
Confidence 76222 22334444 899998877765543
No 67
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=98.07 E-value=7e-06 Score=88.94 Aligned_cols=119 Identities=20% Similarity=0.231 Sum_probs=79.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.|++.|+++.++|++....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~---------------------------------- 148 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD---------------------------------- 148 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS----------------------------------
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChH----------------------------------
Confidence 4679999999999999999999999988777777666654221000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcC-CeEEEEcCCccChhhhhhcC-
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCD-YRTLAIGDGGNDVRMIQKAD- 764 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~-~~v~~iGDG~ND~~ml~~Ad- 764 (1104)
..++++. .|.--..+++.+.-.. +.+++|||+.||+.|++.|+
T Consensus 149 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~ 199 (267)
T 1swv_A 149 -----------------------------FLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 199 (267)
T ss_dssp -----------------------------CCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred -----------------------------heecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCC
Confidence 0111111 1111223344443344 68999999999999999999
Q ss_pred --ceEEecCCc------------------------hHHHhh-hcceecccchhhHHHH
Q 001304 765 --IGVGISGRE------------------------GLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 765 --vGIam~g~~------------------------~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
++|++ |+. ..+.+. .||+++.++..+..++
T Consensus 200 ~~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l 256 (267)
T 1swv_A 200 WTVGVIL-GSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM 256 (267)
T ss_dssp EEEEECT-TCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred EEEEEcC-CCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHH
Confidence 55555 443 233444 4999999888776654
No 68
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=98.07 E-value=4.9e-06 Score=85.71 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=77.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.+++.|++++++|+....... .....|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46899999999999999999999999877766 666666521100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce-EEecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam~g 771 (1104)
.++.+. ..-...-.|+--..+.+.+.-..+.++++||+.||++|++.|+++ |+| +
T Consensus 129 --~~~~~~---------------------~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~-~ 184 (207)
T 2go7_A 129 --EILTSQ---------------------SGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-L 184 (207)
T ss_dssp --EEECGG---------------------GCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-S
T ss_pred --eEEecC---------------------cCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEE-e
Confidence 000000 000000011112234444443456799999999999999999998 677 5
Q ss_pred CchHHHhhhcceecccchhhHHH
Q 001304 772 REGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 772 ~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+.. + .||+++.+++.+..+
T Consensus 185 ~~~-~---~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 185 EST-Y---EGNHRIQALADISRI 203 (207)
T ss_dssp CCS-C---TTEEECSSTTHHHHH
T ss_pred cCC-C---CCCEEeCCHHHHHHH
Confidence 543 3 689999887766553
No 69
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=98.07 E-value=4.7e-06 Score=88.72 Aligned_cols=119 Identities=17% Similarity=0.210 Sum_probs=84.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 154 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK---------------------------------- 154 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------------
Confidence 3578999999999999999999999999888888888888743211
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHH----HHHhc-CCeEEEEcCCccChhhhhhcC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVE----LLKSC-DYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~----~lk~~-~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
..+++...+ +.|..+++ .+.-. .+.+++|||+.||+.|.+.|+
T Consensus 155 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG 204 (240)
T 3sd7_A 155 ------------------------------YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIG 204 (240)
T ss_dssp ------------------------------EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHT
T ss_pred ------------------------------EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCC
Confidence 111111111 12333333 33334 568999999999999999999
Q ss_pred c---eEEecCCchHHH--hhhcceecccchhhHHHH
Q 001304 765 I---GVGISGREGLQA--ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 765 v---GIam~g~~~~~a--~~~AD~vl~~f~~l~~ll 795 (1104)
+ +|++ |+...+. +..||+++.+++.+..++
T Consensus 205 ~~~i~v~~-g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 205 IDSIGVLY-GYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp CEEEEESS-SSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCEEEEeC-CCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9 5555 4433333 357999999988877654
No 70
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=98.06 E-value=6.6e-06 Score=86.81 Aligned_cols=119 Identities=18% Similarity=0.065 Sum_probs=83.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 136 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN---------------------------------- 136 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC----------------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe----------------------------------
Confidence 5679999999999999999999999999988888888887432111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHH-Hh---cCCeEEEEcCCccChhhhhhcCc-
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELL-KS---CDYRTLAIGDGGNDVRMIQKADI- 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~l-k~---~~~~v~~iGDG~ND~~ml~~Adv- 765 (1104)
.+++...+ +.|..+++.+ +. ..+.+++|||+.||+.|.+.|++
T Consensus 137 ------------------------------~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~ 186 (233)
T 3s6j_A 137 ------------------------------IVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKAT 186 (233)
T ss_dssp ------------------------------EECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred ------------------------------eeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCE
Confidence 11111111 1123333322 22 34679999999999999999999
Q ss_pred --eEEecCCchHHHhh-hcceecccchhhHHHH
Q 001304 766 --GVGISGREGLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 --GIam~g~~~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+|++..+...+.+. .||+++.++..+..++
T Consensus 187 ~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 187 GVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp EEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred EEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 55553344555555 4999999988777654
No 71
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=98.04 E-value=2e-05 Score=81.63 Aligned_cols=123 Identities=23% Similarity=0.261 Sum_probs=88.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++ +++.++|+.....+..+...+|+...-.. .+...+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--~~~~~~-------------------------- 119 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD-------------------------- 119 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECT--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc--eeEEcC--------------------------
Confidence 5789999999999999 99999999999999999999997421000 000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee--ccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC--RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~--r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
...... .-.|..|..+++.+......+++|||+.||++|.+.|++++++
T Consensus 120 ----------------------------~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~- 170 (206)
T 1rku_A 120 ----------------------------SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF- 170 (206)
T ss_dssp ----------------------------TSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-
T ss_pred ----------------------------CceEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-
Confidence 000000 1356789999999887788999999999999999999999998
Q ss_pred CCchHHHhhh-ccee-cccchhhHHH
Q 001304 771 GREGLQAARA-ADYS-IGKFRFLKRL 794 (1104)
Q Consensus 771 g~~~~~a~~~-AD~v-l~~f~~l~~l 794 (1104)
+. ..+.+.. ++++ +.++..+..+
T Consensus 171 ~~-~~~~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 171 HA-PENVIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp SC-CHHHHHHCTTSCEECSHHHHHHH
T ss_pred CC-cHHHHHHHhhhccccchHHHHHH
Confidence 33 3345554 4554 5565555443
No 72
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=98.03 E-value=4.8e-06 Score=87.06 Aligned_cols=112 Identities=7% Similarity=-0.012 Sum_probs=76.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.+++.|+++.++|++ ..+..+...+|+...-.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~----------------------------------- 133 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD----------------------------------- 133 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc-----------------------------------
Confidence 46799999999999999999999998 44555666666532110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc----Ch--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~----sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
..+++.. -| +--..+.+.+.-..+.+++|||+.||++|++.|+++
T Consensus 134 -----------------------------~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~ 184 (221)
T 2wf7_A 134 -----------------------------AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGAL 184 (221)
T ss_dssp -----------------------------EECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred -----------------------------eEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCE
Confidence 0011111 11 111223333332346799999999999999999999
Q ss_pred EEecCCchHHHhhhcceecccchhhH
Q 001304 767 VGISGREGLQAARAADYSIGKFRFLK 792 (1104)
Q Consensus 767 Iam~g~~~~~a~~~AD~vl~~f~~l~ 792 (1104)
++| .+...+.+ .||+++.+++.+.
T Consensus 185 ~~~-~~~~~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 185 PIG-VGRPEDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp EEE-ESCHHHHC-SSSEEESSGGGCC
T ss_pred EEE-ECCHHHhc-cccchhcCHHhCC
Confidence 999 56555565 8999998776653
No 73
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=97.98 E-value=1.2e-05 Score=84.68 Aligned_cols=129 Identities=20% Similarity=0.289 Sum_probs=86.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|+++|++++++||.....+..+.+.+|+....--...+.++.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~------------------------- 139 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYF------------------------- 139 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECT-------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcC-------------------------
Confidence 3689999999999999999999999999999999999999842100000000000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-----cChhhHHHHHHHHHh-cC-CeEEEEcCCccChhhhhhcC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-----VTPSQKAQLVELLKS-CD-YRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-----~sP~qK~~iV~~lk~-~~-~~v~~iGDG~ND~~ml~~Ad 764 (1104)
.......+ +.+..|..+++.+.+ .| +.++++||+.||+.|.+.|+
T Consensus 140 ----------------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag 191 (225)
T 1nnl_A 140 ----------------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPAD 191 (225)
T ss_dssp ----------------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSS
T ss_pred ----------------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCC
Confidence 00000111 123456666665543 33 67999999999999999999
Q ss_pred ceEEecCCc-hHHHhhhcceecccchhhHH
Q 001304 765 IGVGISGRE-GLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 765 vGIam~g~~-~~~a~~~AD~vl~~f~~l~~ 793 (1104)
++|++.... .......+|+++.++..+..
T Consensus 192 ~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 192 AFIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp EEEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred eEEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 988883221 12234468999988776544
No 74
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.98 E-value=1e-05 Score=83.88 Aligned_cols=123 Identities=13% Similarity=0.058 Sum_probs=82.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|++++++|+.....+..+.+..|+...-.. ++.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~----------------------------- 137 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI--VLS----------------------------- 137 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee--Eee-----------------------------
Confidence 4789999999999999999999999999999888888887432110 100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
++ ..-...-.|+--..+.+.+.-..+.+++|||+.||+.|.+.|++++.+...
T Consensus 138 ------~~---------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 138 ------GE---------------------EFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp ------GG---------------------GCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred ------cc---------------------cccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECC
Confidence 00 000000011112233444443457899999999999999999998877333
Q ss_pred ch-HHHhhhcceecccchhhHH
Q 001304 773 EG-LQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 773 ~~-~~a~~~AD~vl~~f~~l~~ 793 (1104)
.+ ......||+++.++..+..
T Consensus 191 ~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 191 NEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp SSSCCCCTTSSEEESSGGGGGG
T ss_pred CCccchhccHHHHHHHHHHHHh
Confidence 21 1123578999988776644
No 75
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=97.98 E-value=1.2e-05 Score=87.27 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=81.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++.|+++.++|+.....+..+...+|+......
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~---------------------------------- 156 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA---------------------------------- 156 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS----------------------------------
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc----------------------------------
Confidence 5789999999999999999999999998888777777765332000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHH----HHHHHHHhcC-CeEEEEcCCccChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKA----QLVELLKSCD-YRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~----~iV~~lk~~~-~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++...+. -|. .+.+.+.-.. +.+++|||+.||+.|.+.|++
T Consensus 157 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~ 207 (277)
T 3iru_A 157 -----------------------------STVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGM 207 (277)
T ss_dssp -----------------------------EEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTC
T ss_pred -----------------------------eEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCC
Confidence 1111111111 122 2334444355 789999999999999999995
Q ss_pred ---eEEecCC-----------------------chHHHhh-hcceecccchhhHHHH
Q 001304 766 ---GVGISGR-----------------------EGLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 ---GIam~g~-----------------------~~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+|++.++ ...+.+. .||+++.++..|..++
T Consensus 208 ~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 208 WTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVI 264 (277)
T ss_dssp EEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHH
T ss_pred eEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHH
Confidence 5555211 2334444 4899999988887764
No 76
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=97.93 E-value=1.6e-05 Score=83.86 Aligned_cols=119 Identities=15% Similarity=0.118 Sum_probs=79.1
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.+.+++.+.++.|++. |+++.++|+.....+.......|+...-.. ++ .+
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~--~~------------------------- 143 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GA--FA------------------------- 143 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EE--CT-------------------------
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ce--ec-------------------------
Confidence 4679999999999999 999999999999888888888887432110 00 00
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccC--hhhHHHH----HHHHH--hcCCeEEEEcCCccChhhhhhc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQL----VELLK--SCDYRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~s--P~qK~~i----V~~lk--~~~~~v~~iGDG~ND~~ml~~A 763 (1104)
.... |+-+..+ .+.+. -..+.+++|||+.||+.|.+.|
T Consensus 144 ----------------------------------~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~a 189 (234)
T 2hcf_A 144 ----------------------------------DDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCAREL 189 (234)
T ss_dssp ----------------------------------TTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTT
T ss_pred ----------------------------------CCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHC
Confidence 0111 1112222 23332 2336799999999999999999
Q ss_pred Cce---EEecCCchHHHhh--hcceecccchhhHHHH
Q 001304 764 DIG---VGISGREGLQAAR--AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 764 dvG---Iam~g~~~~~a~~--~AD~vl~~f~~l~~ll 795 (1104)
+++ |+. |....+... .||+++.+++.+..++
T Consensus 190 G~~~i~v~~-~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 190 DARSIAVAT-GNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp TCEEEEECC-SSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred CCcEEEEcC-CCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 955 443 333333333 3899998887776654
No 77
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.93 E-value=2.8e-05 Score=82.21 Aligned_cols=105 Identities=14% Similarity=0.041 Sum_probs=73.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.|+++|+++.++||.....+..+++.+|+..--.. .+...+|.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~------------------------- 145 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIAT-DPEYRDGR------------------------- 145 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEEC-EEEEETTE-------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEc-ceEEECCE-------------------------
Confidence 5799999999999999999999999999999999999998311000 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceee-eccChhhHHHHHHHHH-hcC------CeEEEEcCCccChhhhhhcC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLK-SCD------YRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~-~r~sP~qK~~iV~~lk-~~~------~~v~~iGDG~ND~~ml~~Ad 764 (1104)
....+. ....+..|...++.+. +.| +.++++||+.||++|++.|+
T Consensus 146 ---------------------------~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag 198 (232)
T 3fvv_A 146 ---------------------------YTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVT 198 (232)
T ss_dssp ---------------------------EEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSS
T ss_pred ---------------------------EeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCC
Confidence 000010 1123456776665543 344 57999999999999999999
Q ss_pred ceEEec
Q 001304 765 IGVGIS 770 (1104)
Q Consensus 765 vGIam~ 770 (1104)
+++++.
T Consensus 199 ~~~~~~ 204 (232)
T 3fvv_A 199 RPIAAN 204 (232)
T ss_dssp EEEEES
T ss_pred CeEEEC
Confidence 999993
No 78
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.92 E-value=1.7e-05 Score=80.27 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=42.2
Q ss_pred HHHHHhcCCeEEEEcCCccChhhhhhcCc---eEEecCCchHHHh----hhcceecccchhhHHHHH
Q 001304 737 VELLKSCDYRTLAIGDGGNDVRMIQKADI---GVGISGREGLQAA----RAADYSIGKFRFLKRLIL 796 (1104)
Q Consensus 737 V~~lk~~~~~v~~iGDG~ND~~ml~~Adv---GIam~g~~~~~a~----~~AD~vl~~f~~l~~lll 796 (1104)
.+.+.-..+.+++|||+.||+.|.+.|++ +|.. |....... ..+|+++.+...+..+++
T Consensus 111 ~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 111 ARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQT-GNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp HHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEEST-TTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECC-CCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 33333345789999999999999999996 5544 54443333 357999999888776653
No 79
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.91 E-value=1.2e-05 Score=86.03 Aligned_cols=122 Identities=20% Similarity=0.261 Sum_probs=81.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.++++.|++.|++++++|+.....+..+...+|+...-. .+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~---~~----------------------------- 160 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS---EM----------------------------- 160 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS---EE-----------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE---EE-----------------------------
Confidence 3578999999999999999999999999998899999988732111 00
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-E
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-G 768 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-a 768 (1104)
+.+. -+.+..| .--..+++.+.-..+.+++|||+.||++|.+.|++++ +
T Consensus 161 -----~~~~-----------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 212 (243)
T 2hsz_A 161 -----LGGQ-----------------------SLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVG 212 (243)
T ss_dssp -----ECTT-----------------------TSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred -----Eecc-----------------------cCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence 0000 0011122 2223344444434567999999999999999999995 4
Q ss_pred ec-CCc-hHH-HhhhcceecccchhhHH
Q 001304 769 IS-GRE-GLQ-AARAADYSIGKFRFLKR 793 (1104)
Q Consensus 769 m~-g~~-~~~-a~~~AD~vl~~f~~l~~ 793 (1104)
+. |.. ..+ ....||+++.++..+..
T Consensus 213 v~~g~~~~~~~~~~~ad~vi~~~~el~~ 240 (243)
T 2hsz_A 213 LTYGYNYNIPIAQSKPDWIFDDFADILK 240 (243)
T ss_dssp ESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred EcCCCCchhhhhhCCCCEEECCHHHHHH
Confidence 42 211 112 34578999987666543
No 80
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.89 E-value=1.5e-05 Score=83.88 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=82.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 140 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD---------------------------------- 140 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----------------------------------
Confidence 3578999999999999999999999999888888888888732111
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++...+. -|.. +.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 141 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~ 190 (230)
T 3um9_A 141 ------------------------------HLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGY 190 (230)
T ss_dssp ------------------------------EEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred ------------------------------eeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCC
Confidence 1111111111 1222 333333344779999999999999999999
Q ss_pred eEEecC---CchHHHhhhcceecccchhhHHH
Q 001304 766 GVGISG---REGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 766 GIam~g---~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
++++.. +.....+..+|+++.++..+..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 191 PVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp CEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred EEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 998822 22222344789999987776554
No 81
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.87 E-value=2.8e-05 Score=82.06 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=79.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 147 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD----------------------------------- 147 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee-----------------------------------
Confidence 468999999999999999999999999988888888888742111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh------hhHHHHHHHHHhcCC-eEEEEcCCccChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP------SQKAQLVELLKSCDY-RTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP------~qK~~iV~~lk~~~~-~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++.-.+ +--..+.+.+.-..+ .+++|||+.||+.|.+.|++
T Consensus 148 -----------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~ 198 (231)
T 3kzx_A 148 -----------------------------SIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGC 198 (231)
T ss_dssp -----------------------------EEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTC
T ss_pred -----------------------------eEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCC
Confidence 111111111 111233444443445 79999999999999999997
Q ss_pred -eEEecCCchHHHhhhcceecccchhhHHHH
Q 001304 766 -GVGISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 -GIam~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+|.+ ++... ..+|+++.+++.+..++
T Consensus 199 ~~v~~-~~~~~---~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 199 LPIKY-GSTNI---IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp EEEEE-CC--------CCEEESSHHHHHHHH
T ss_pred eEEEE-CCCCC---CCCceeeCCHHHHHHHH
Confidence 5566 55432 46788888887776654
No 82
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=97.85 E-value=8.1e-05 Score=81.77 Aligned_cols=66 Identities=24% Similarity=0.295 Sum_probs=52.5
Q ss_pred eeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchh
Q 001304 724 ICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
.+.++.|. .|...++.+.+ . .+.++++||+.||++|++.|++|++| ++.....+..||+++.+...
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~-~~~~~~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL-KNATQEAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC-TTCCHHHHHHCCCBCSSCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE-CCccHHHHHhCCEEcCCCCc
Confidence 45666664 68887776654 2 35799999999999999999999999 77777788899999876443
No 83
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.85 E-value=1.4e-05 Score=87.48 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=82.6
Q ss_pred cCCCChHHHHHHHHHcCC--eEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 613 RLQDGVPETIETLRKAGI--NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI--~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
++.+++.++++.|++.|+ +++++|+.....+......+|+...-.. ++..+
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--v~~~~------------------------- 194 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG--LTYCD------------------------- 194 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE--EECCC-------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce--EEEec-------------------------
Confidence 467899999999999999 9999999999888888888887432111 10000
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-cChhhHHHHHHH----HHhcC-CeEEEEcCCccChhhhhhcC
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVEL----LKSCD-YRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~sP~qK~~iV~~----lk~~~-~~v~~iGDG~ND~~ml~~Ad 764 (1104)
..... ..++-|..+++. +.-.. +.+++|||+.||+.|.+.|+
T Consensus 195 --------------------------------~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG 242 (282)
T 3nuq_A 195 --------------------------------YSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLG 242 (282)
T ss_dssp --------------------------------CSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHT
T ss_pred --------------------------------cCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCC
Confidence 00000 112334444433 33344 78999999999999999999
Q ss_pred ceEEecCCchHHH------hhhcceecccchhhHHH
Q 001304 765 IGVGISGREGLQA------ARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 765 vGIam~g~~~~~a------~~~AD~vl~~f~~l~~l 794 (1104)
+|++| ++..... ...||+++.+...|..+
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 243 MKTCI-HLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp CSEEE-EECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CeEEE-EEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 98877 3322211 23789999987776654
No 84
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=97.83 E-value=1.1e-05 Score=91.86 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=39.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.++.+++++.|+.|+++|++|+|+||.....+..+|.++|+.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence 357899999999999999999999999999999999999873
No 85
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=97.82 E-value=2.2e-05 Score=82.77 Aligned_cols=123 Identities=12% Similarity=0.117 Sum_probs=79.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC---HhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~---~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1104)
.+.+++.+.++.|++.|+++.++|+.. ...+.......|+...-.. ++.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~~-------------------------- 150 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TFF-------------------------- 150 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EEE--------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--hee--------------------------
Confidence 458999999999999999999999998 7777777787776322110 100
Q ss_pred CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCce
Q 001304 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 766 (1104)
Q Consensus 690 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvG 766 (1104)
+.. .....| .--..+.+.+.-..+.+++|||+. ||+.|.+.|+++
T Consensus 151 ---------~~~-----------------------~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~ 198 (235)
T 2om6_A 151 ---------ADE-----------------------VLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMW 198 (235)
T ss_dssp ---------HHH-----------------------HTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSE
T ss_pred ---------ccc-----------------------cCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCE
Confidence 000 000111 111122233222346899999999 999999999999
Q ss_pred EEec--CCchHHHhhhcceecccchhhHHHH
Q 001304 767 VGIS--GREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 767 Iam~--g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+++. |++..+.+..+|+++.++..+..++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 199 AVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp EEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred EEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 9882 2222223346899988877665543
No 86
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.82 E-value=2e-05 Score=82.84 Aligned_cols=125 Identities=18% Similarity=0.236 Sum_probs=82.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.. ++ .+.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--i~--~~~------------------------ 133 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--IV--GGD------------------------ 133 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EE--CTT------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE--EE--ecC------------------------
Confidence 35789999999999999999999999998888888888887321110 00 000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce-EEec
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam~ 770 (1104)
......-.|.--..+++.+.-..+.+++|||+.||++|.+.|+++ |++.
T Consensus 134 ------------------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 134 ------------------------------TFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp ------------------------------SSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred ------------------------------cCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 000001112222334444443456799999999999999999998 6662
Q ss_pred -CCchHHHhhhcceecccchhhHHHH
Q 001304 771 -GREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 771 -g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
|....+. ..+|+++.++..+..++
T Consensus 184 ~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 184 WGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp TSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CCCCCccc-cCCCEEECCHHHHHHHH
Confidence 2222222 56899998877776654
No 87
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=97.81 E-value=2e-05 Score=83.11 Aligned_cols=126 Identities=13% Similarity=0.044 Sum_probs=85.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.. ++..+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~-------------------------- 149 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--VLSVD-------------------------- 149 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE--EEEGG--------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE--EEEec--------------------------
Confidence 35789999999999999999999999999888888888887432111 11000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec-
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS- 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~- 770 (1104)
..-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++++-
T Consensus 150 ------------------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~ 199 (233)
T 3umb_A 150 ------------------------------AVRLYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWIN 199 (233)
T ss_dssp ------------------------------GTTCCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred ------------------------------ccCCCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence 0000001111112233444334578999999999999999999999882
Q ss_pred --CCchHHHhhhcceecccchhhHHHH
Q 001304 771 --GREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 771 --g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
++.....+..+|+++.++..+..++
T Consensus 200 ~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 200 RLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp TTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred CCCCCchhccCCCCEEECCHHHHHHHH
Confidence 2222333447999999988877764
No 88
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.79 E-value=3.4e-05 Score=81.39 Aligned_cols=123 Identities=13% Similarity=0.100 Sum_probs=82.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++. +++.++|+.....+.......|+...-.. ++.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~~----------------------------- 147 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--ITT----------------------------- 147 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eEe-----------------------------
Confidence 4679999999999999 99999999999888888888887322110 100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcC---ceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKAD---IGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~Ad---vGIa 768 (1104)
+.. .-...-.|.--..+.+.+.-..+.+++|||+. ||+.|.+.|+ ++|+
T Consensus 148 ------~~~---------------------~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~ 200 (234)
T 3u26_A 148 ------SEE---------------------AGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLD 200 (234)
T ss_dssp ------HHH---------------------HTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred ------ccc---------------------cCCCCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEEC
Confidence 000 00000111112223334433457899999997 9999999999 4666
Q ss_pred ecCCchHHHhhhcceecccchhhHHHH
Q 001304 769 ISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 769 m~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+ |+...+.+..||+++.++..+..++
T Consensus 201 ~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 201 R-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp S-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred C-CCCccccccCCCEeeCCHHHHHHHH
Confidence 6 5555555668999999988776654
No 89
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=97.77 E-value=5.4e-05 Score=81.45 Aligned_cols=120 Identities=15% Similarity=0.089 Sum_probs=82.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++.|+++.++|+.....+..+....|+..
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~------------------------------------- 151 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE------------------------------------- 151 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-------------------------------------
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-------------------------------------
Confidence 4567999999999999999999999999988888888887621
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccc-eeeeccCh-hh--HHHH----HHHHHhcCCeEEEEcCCccChhhhhhc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRT-AICCRVTP-SQ--KAQL----VELLKSCDYRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~-~i~~r~sP-~q--K~~i----V~~lk~~~~~v~~iGDG~ND~~ml~~A 763 (1104)
.| .. .++.+..+ .. |..+ .+.+.-..+.+++|||+.||+.|.+.|
T Consensus 152 --------------------~f-------~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~a 204 (259)
T 4eek_A 152 --------------------LA-------GEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAA 204 (259)
T ss_dssp --------------------HH-------CSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHH
T ss_pred --------------------hc-------cceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 00 01 11122112 11 2222 333322347799999999999999999
Q ss_pred CceE-Eec-CCc-----hHHHhh-hcceecccchhhHHHH
Q 001304 764 DIGV-GIS-GRE-----GLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 764 dvGI-am~-g~~-----~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+++. ++. |.. ..+... .||+++.++..+..++
T Consensus 205 G~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l 244 (259)
T 4eek_A 205 GATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAAL 244 (259)
T ss_dssp TCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHH
T ss_pred CCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHH
Confidence 9984 442 211 223343 5899999988887765
No 90
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.77 E-value=1.3e-05 Score=83.13 Aligned_cols=115 Identities=20% Similarity=0.255 Sum_probs=77.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++. +++.++|+.....+..+...+|+...-
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f------------------------------------ 125 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM------------------------------------ 125 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE------------------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc------------------------------------
Confidence 4689999999999999 999999999988888877777762110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH------HHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK------~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
...+++.-....| ..+.+.+.-..+.+++|||+.||+.|.+.|+++
T Consensus 126 ----------------------------~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~ 177 (209)
T 2hdo_A 126 ----------------------------AVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177 (209)
T ss_dssp ----------------------------EEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred ----------------------------cEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCe
Confidence 0111111111223 223333333346799999999999999999999
Q ss_pred EEec--CCc-hHHHhhhcceecccchhhHH
Q 001304 767 VGIS--GRE-GLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 767 Iam~--g~~-~~~a~~~AD~vl~~f~~l~~ 793 (1104)
+++. |.. ....+. ||+++.++..+..
T Consensus 178 ~~~~~~~~~~~~~~~~-a~~~~~~~~el~~ 206 (209)
T 2hdo_A 178 FGLAVWGMDPNADHQK-VAHRFQKPLDILE 206 (209)
T ss_dssp EEEEGGGCCTTGGGSC-CSEEESSGGGGGG
T ss_pred EEEEcCCCCChhhhcc-CCEEeCCHHHHHH
Confidence 9872 222 222333 9999987766543
No 91
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=97.77 E-value=0.00012 Score=77.90 Aligned_cols=119 Identities=14% Similarity=0.171 Sum_probs=79.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------------- 138 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE----------------------------------- 138 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhcc-----------------------------------
Confidence 468999999999999999999999998888888888888632111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHH----HHHHHHHhcCCeEEEEcCCc-cChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKA----QLVELLKSCDYRTLAIGDGG-NDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~----~iV~~lk~~~~~v~~iGDG~-ND~~ml~~Adv 765 (1104)
..++++..+. -|. .+.+.+.-..+.+++|||+. ||+.|.+.|++
T Consensus 139 -----------------------------~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 139 -----------------------------HVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGM 189 (241)
T ss_dssp -----------------------------EEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred -----------------------------EEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCC
Confidence 1111111111 112 22333333446799999998 99999999999
Q ss_pred eEEe--cCCchHHHhh---hcceecccchhhHHHH
Q 001304 766 GVGI--SGREGLQAAR---AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 GIam--~g~~~~~a~~---~AD~vl~~f~~l~~ll 795 (1104)
++.. .|....+... .+|+++.+...+..++
T Consensus 190 ~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 190 KTVWFRYGKHSERELEYRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp EEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHH
T ss_pred EEEEECCCCCCcccccccCCCCEEECCHHHHHHHH
Confidence 8644 1332222232 6899998877765543
No 92
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.75 E-value=5.1e-05 Score=80.65 Aligned_cols=119 Identities=12% Similarity=0.033 Sum_probs=80.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|+++|+++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 149 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD----------------------------------- 149 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcC-----------------------------------
Confidence 578999999999999999999999999988888888888732211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
..++++. .|.--..+.+.+.-..+.+++|||+.||+.|.+.|+++
T Consensus 150 -----------------------------~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~ 200 (240)
T 2no4_A 150 -----------------------------SCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFN 200 (240)
T ss_dssp -----------------------------EEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred -----------------------------EEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCE
Confidence 0111111 11112223333333456799999999999999999976
Q ss_pred EEe--cCCchHHHhhhc-ceecccchhhHHHH
Q 001304 767 VGI--SGREGLQAARAA-DYSIGKFRFLKRLI 795 (1104)
Q Consensus 767 Iam--~g~~~~~a~~~A-D~vl~~f~~l~~ll 795 (1104)
+.. .|+........+ |+++.++..+..++
T Consensus 201 ~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 201 TVRINRQGNPPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp EEEECTTCCCCCCTTSCCSEEESSGGGHHHHH
T ss_pred EEEECCCCCCCcccCCCCceeeCCHHHHHHHH
Confidence 533 133222223457 99998877765543
No 93
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.72 E-value=5.3e-05 Score=80.04 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=82.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+ .|+++.++|+.....+......+|+...-.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~----------------------------------- 150 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK----------------------------------- 150 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce-----------------------------------
Confidence 56899999999999 999999999998888888888777632211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHH-HHHh---cCCeEEEEcCCc-cChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVE-LLKS---CDYRTLAIGDGG-NDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~-~lk~---~~~~v~~iGDG~-ND~~ml~~Adv 765 (1104)
..+++...+ +-|..+++ .++. ..+.+++|||+. ||+.|.+.|++
T Consensus 151 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~ 201 (240)
T 3qnm_A 151 -----------------------------KIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGM 201 (240)
T ss_dssp -----------------------------EEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred -----------------------------eEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCC
Confidence 111111111 12233333 2333 346899999995 99999999999
Q ss_pred eEEecCCchH--HHhhhcceecccchhhHHHHHhhhhh
Q 001304 766 GVGISGREGL--QAARAADYSIGKFRFLKRLILVHGRY 801 (1104)
Q Consensus 766 GIam~g~~~~--~a~~~AD~vl~~f~~l~~lll~~GR~ 801 (1104)
++++ .+.+. .....+|+++.++..+..+ .+|+.
T Consensus 202 ~~~~-~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~~ 236 (240)
T 3qnm_A 202 HQAF-YNVTERTVFPFQPTYHIHSLKELMNL--LEGHH 236 (240)
T ss_dssp EEEE-ECCSCCCCCSSCCSEEESSTHHHHHH--TC---
T ss_pred eEEE-EcCCCCCCcCCCCceEECCHHHHHHH--Hhccc
Confidence 9988 44333 3345799999998877664 45653
No 94
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.72 E-value=6.7e-05 Score=78.75 Aligned_cols=115 Identities=15% Similarity=0.033 Sum_probs=79.2
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
++.+++.+.++.|+++| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999988888777777777632111
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHH----hcCCeEEEEcCCc-cChhhhhhcCce
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK----SCDYRTLAIGDGG-NDVRMIQKADIG 766 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk----~~~~~v~~iGDG~-ND~~ml~~AdvG 766 (1104)
.+.+. ++.|..+++.+. -..+.+++|||+. ||+.|.+.|+++
T Consensus 151 -------------------------------~~~~~--~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~ 197 (234)
T 3ddh_A 151 -------------------------------HIEVM--SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGY 197 (234)
T ss_dssp -------------------------------EEEEE--SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCE
T ss_pred -------------------------------eeeec--CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCe
Confidence 11111 122444444333 2346799999996 999999999999
Q ss_pred EEec------CCchHHHhh-hcceecccchhhHHH
Q 001304 767 VGIS------GREGLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 767 Iam~------g~~~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
+++- |+...+... .+|+++.+...+..+
T Consensus 198 ~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 198 GVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred EEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 8773 233333334 449999987766543
No 95
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.71 E-value=5.2e-05 Score=80.56 Aligned_cols=137 Identities=12% Similarity=0.180 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++|+.....+..+.. |+... .. ++..+.... ...
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~--v~~~~~~~~--------------------~~~ 131 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DR--IYCNHASFD--------------------NDY 131 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GG--EEEEEEECS--------------------SSB
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-Ce--EEeeeeEEc--------------------CCc
Confidence 689999999999999999999999999888887777 66432 11 222110000 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
+.... .......+.+-....|..+++.+....+.+++|||+.||+.|.+.|++.++..+
T Consensus 132 ~~~~~--------------------~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~- 190 (236)
T 2fea_A 132 IHIDW--------------------PHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY- 190 (236)
T ss_dssp CEEEC--------------------TTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHH-
T ss_pred eEEec--------------------CCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechH-
Confidence 00000 000011111213557888888887667889999999999999999999886522
Q ss_pred chHHHhhh--cceecccchhhHHHH
Q 001304 773 EGLQAARA--ADYSIGKFRFLKRLI 795 (1104)
Q Consensus 773 ~~~~a~~~--AD~vl~~f~~l~~ll 795 (1104)
........ +|+++.++..+..++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 191 LLNECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp HHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHHHCCCCeeecCCHHHHHHHH
Confidence 22223332 789888877766543
No 96
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=97.71 E-value=1.4e-05 Score=85.75 Aligned_cols=49 Identities=16% Similarity=0.115 Sum_probs=39.0
Q ss_pred CeEEEEcCCccChhhhhhcCc---eEEecCCchHHHhhhcceecccchhhHHH
Q 001304 745 YRTLAIGDGGNDVRMIQKADI---GVGISGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 745 ~~v~~iGDG~ND~~ml~~Adv---GIam~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+.+++|||+.||+.|.+.|++ +|++ |+...+.+..||+++.++..+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~-~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPD-GNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCC-TTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcC-CCCchhhcccccEeecCHHHhhHH
Confidence 789999999999999999995 4555 554445667899999988776554
No 97
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.68 E-value=4.2e-05 Score=81.37 Aligned_cols=121 Identities=13% Similarity=0.061 Sum_probs=75.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.|++.|+++.++|+.....+...... |+...-..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--------------------------------- 152 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA--------------------------------- 152 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG---------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC---------------------------------
Confidence 46789999999999999999999999887666665555 65321100
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc----Ch--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~----sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
...+++.. .| .--..+.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 153 -----------------------------~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 203 (247)
T 3dv9_A 153 -----------------------------NLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGI 203 (247)
T ss_dssp -----------------------------GGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTS
T ss_pred -----------------------------CeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCC
Confidence 01111111 11 11123334443345779999999999999999997
Q ss_pred eE-Eec-CCch-HHHhh-hcceecccchhhHHHH
Q 001304 766 GV-GIS-GREG-LQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 GI-am~-g~~~-~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+. ++. |... .+..+ .||+++.++..+..++
T Consensus 204 ~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 204 FTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp EEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred eEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 64 442 2222 22222 7999999887776553
No 98
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.64 E-value=4.1e-05 Score=81.59 Aligned_cols=121 Identities=16% Similarity=0.054 Sum_probs=76.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.|++.|+++.++|+.....+...... |+...-..
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--------------------------------- 153 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHK--------------------------------- 153 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCG---------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCc---------------------------------
Confidence 36789999999999999999999999887666655555 65321100
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc----Ch--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~----sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
...+++.- .| +--..+.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 154 -----------------------------d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 204 (243)
T 3qxg_A 154 -----------------------------ELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGI 204 (243)
T ss_dssp -----------------------------GGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTC
T ss_pred -----------------------------ceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCC
Confidence 00111111 11 11122233333234679999999999999999999
Q ss_pred eEEecCCc---hHHHh-hhcceecccchhhHHHH
Q 001304 766 GVGISGRE---GLQAA-RAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 GIam~g~~---~~~a~-~~AD~vl~~f~~l~~ll 795 (1104)
+..+-.+. ..+.. ..||+++.++..|..++
T Consensus 205 ~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 205 FTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW 238 (243)
T ss_dssp EEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 55332322 22222 26999999887776553
No 99
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=97.63 E-value=8.8e-05 Score=78.93 Aligned_cols=117 Identities=12% Similarity=0.153 Sum_probs=77.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++|+.....+..+...+|+. .-. .
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~---~------------------------------- 154 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD---F------------------------------- 154 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS---E-------------------------------
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee---E-------------------------------
Confidence 35699999999999999999999999888888888888763 211 1
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccC--hhhHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~s--P~qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
.+++... ++-|.. +.+.+.-..+.+++|||+.||+.|.+.|++.
T Consensus 155 ------------------------------~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~ 204 (240)
T 2hi0_A 155 ------------------------------ALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMD 204 (240)
T ss_dssp ------------------------------EEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred ------------------------------EEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 1111111 111222 2333332346799999999999999999994
Q ss_pred -EEec-CCc-hHHHhh-hcceecccchhhHHH
Q 001304 767 -VGIS-GRE-GLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 767 -Iam~-g~~-~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
|++. |.. ..+.+. .||+++.++..+..+
T Consensus 205 ~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~ 236 (240)
T 2hi0_A 205 EIAVNWGFRSVPFLQKHGATVIVDTAEKLEEA 236 (240)
T ss_dssp EEEESSSSSCHHHHHHTTCCCEECSHHHHHHH
T ss_pred EEEECCCCCchhHHHhcCCCEEECCHHHHHHH
Confidence 3431 332 233443 689999887665443
No 100
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.62 E-value=3.4e-05 Score=81.40 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=80.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-.. ++..+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~--------------------------- 145 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSVD--------------------------- 145 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEESG---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhhe--EEEec---------------------------
Confidence 5789999999999999999999999998888888888887322110 10000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
..-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++.+...
T Consensus 146 -----------------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 196 (232)
T 1zrn_A 146 -----------------------------PVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 196 (232)
T ss_dssp -----------------------------GGTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred -----------------------------ccCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 000001112222233344433446799999999999999999999877222
Q ss_pred c---hHHHhhhcceecccchhhHH
Q 001304 773 E---GLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 773 ~---~~~a~~~AD~vl~~f~~l~~ 793 (1104)
. ....+..+|+++.+...+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~el~~ 220 (232)
T 1zrn_A 197 TGNVFEEMGQTPDWEVTSLRAVVE 220 (232)
T ss_dssp TCCCCCSSSCCCSEEESSHHHHHT
T ss_pred CCCCccccCCCCCEEECCHHHHHH
Confidence 1 12223468999887665543
No 101
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=97.58 E-value=8.1e-05 Score=81.10 Aligned_cols=120 Identities=9% Similarity=-0.022 Sum_probs=77.8
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.+.+++.+.++.|++. |+++.++|+.....+.......|+...+ . ++.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~-~--i~~---------------------------- 162 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPE-Y--FIT---------------------------- 162 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCS-S--EEC----------------------------
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccC-E--EEE----------------------------
Confidence 3579999999999999 9999999999988888888777763211 0 110
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-------cCCeEEEEcCCccChhhhhhcC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-------~~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
+.. .-...-.|+--..+.+.+.- ..+.+++|||+.||+.|.+.|+
T Consensus 163 -------~~~---------------------~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG 214 (275)
T 2qlt_A 163 -------AND---------------------VKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAG 214 (275)
T ss_dssp -------GGG---------------------CSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTT
T ss_pred -------ccc---------------------CCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcC
Confidence 000 00000011111223333333 3457999999999999999999
Q ss_pred ceEEe--cCCchHHHhh-hcceecccchhh
Q 001304 765 IGVGI--SGREGLQAAR-AADYSIGKFRFL 791 (1104)
Q Consensus 765 vGIam--~g~~~~~a~~-~AD~vl~~f~~l 791 (1104)
+++.+ .|+...+.++ .||+++.+...+
T Consensus 215 ~~~i~v~~~~~~~~~~~~~ad~v~~~~~el 244 (275)
T 2qlt_A 215 CKIVGIATTFDLDFLKEKGCDIIVKNHESI 244 (275)
T ss_dssp CEEEEESSSSCHHHHTTSSCSEEESSGGGE
T ss_pred CEEEEECCCCCHHHHhhCCCCEEECChHHc
Confidence 87655 2344444455 589999876554
No 102
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.57 E-value=0.00013 Score=75.85 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=79.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++ |+++.++|+.....+..+.+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 467999999999999 99999999998888888888888742211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-Hhc---CCeEEEEcCCccChhhhhhcCc---
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSC---DYRTLAIGDGGNDVRMIQKADI--- 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~~---~~~v~~iGDG~ND~~ml~~Adv--- 765 (1104)
..++++-.++-|..+.+.+ ++. .+.+++|||+.||+.|.+.|++
T Consensus 128 -----------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i 178 (210)
T 2ah5_A 128 -----------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178 (210)
T ss_dssp -----------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -----------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEE
Confidence 1222221122344444433 333 3679999999999999999999
Q ss_pred eEEecCCc-hHHHhh-hcceecccchhhHH
Q 001304 766 GVGISGRE-GLQAAR-AADYSIGKFRFLKR 793 (1104)
Q Consensus 766 GIam~g~~-~~~a~~-~AD~vl~~f~~l~~ 793 (1104)
+|++ |.. ..+.+. .+|+++.++..+..
T Consensus 179 ~v~~-~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 179 AITW-GFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESS-SSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEcC-CCCCHHHHHhCCCCEEECCHHHHHH
Confidence 5555 443 333443 58999988766544
No 103
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=97.54 E-value=0.00065 Score=73.39 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcC---CCHhHHHHHHHHcCCCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 655 (1104)
+-++++++|++++++|++++++|| +..........++|+...
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 345789999999999999999988 777777788888888543
No 104
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.53 E-value=0.00021 Score=75.37 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=81.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++. +++.++|+.....+.......|+...-.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 146 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK---------------------------------- 146 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh----------------------------------
Confidence 35789999999999999 9999999999888888888888732211
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHH-HHHhcC----CeEEEEcCCc-cChhhhhhc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVE-LLKSCD----YRTLAIGDGG-NDVRMIQKA 763 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~-~lk~~~----~~v~~iGDG~-ND~~ml~~A 763 (1104)
..+++...+. -|..+++ .++..| +.+++|||+. ||+.|.+.|
T Consensus 147 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~a 196 (238)
T 3ed5_A 147 ------------------------------DIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLA 196 (238)
T ss_dssp ------------------------------EEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred ------------------------------eEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHC
Confidence 1111111111 1233333 233333 6799999998 999999999
Q ss_pred CceEEecCC--chHHHhhhcceecccchhhHHHH
Q 001304 764 DIGVGISGR--EGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 764 dvGIam~g~--~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+++..+.+. .....+..||+++.++..+..++
T Consensus 197 G~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 197 GLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp TCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred CCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 996533122 22234457899999988887765
No 105
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=97.52 E-value=0.00012 Score=76.66 Aligned_cols=115 Identities=13% Similarity=0.167 Sum_probs=76.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC-CCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
++.+++.+.++.++. +++++|+.....+..+...+|+...- .. +
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~--~------------------------------ 131 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPH--I------------------------------ 131 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTC--E------------------------------
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccce--E------------------------------
Confidence 457888888887764 99999999988888888888874211 11 1
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc--Ch--hhHHH----HHHHHHhcCCeEEEEcCCccChhhhhhc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TP--SQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--sP--~qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~A 763 (1104)
++++. .. ..|.. +.+.+.-..+.+++|||+.||++|++.|
T Consensus 132 --------------------------------~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~a 179 (229)
T 2fdr_A 132 --------------------------------YSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAA 179 (229)
T ss_dssp --------------------------------EEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHT
T ss_pred --------------------------------EeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHC
Confidence 11110 11 12333 3333333446799999999999999999
Q ss_pred Cce-EEecCCchH-------HHhhh-cceecccchhhHHHH
Q 001304 764 DIG-VGISGREGL-------QAARA-ADYSIGKFRFLKRLI 795 (1104)
Q Consensus 764 dvG-Iam~g~~~~-------~a~~~-AD~vl~~f~~l~~ll 795 (1104)
+++ |++ ++... +.++. ||+++.+...+..++
T Consensus 180 G~~~i~~-~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 180 GMRVIGF-TGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp TCEEEEE-CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCEEEEE-ecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 998 566 33322 35555 999998877765543
No 106
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=97.51 E-value=0.00023 Score=77.02 Aligned_cols=45 Identities=9% Similarity=0.052 Sum_probs=37.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcC---CCHhHHHHHHHHcCCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 655 (1104)
.+.+-++++++|++++++|++++++|| +..........++|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 444567899999999999999999999 677777777888888543
No 107
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=97.50 E-value=6.3e-05 Score=80.46 Aligned_cols=116 Identities=13% Similarity=0.150 Sum_probs=80.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++. +++.++|+.....+..+...+|+. - . .+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f--~--~~------------------------------ 163 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-W--D--ML------------------------------ 163 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-C--S--EE------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-c--c--eE------------------------------
Confidence 4678999999999985 999999999988888888888873 1 1 00
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc--ChhhHHHHH----HHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQKAQLV----ELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--sP~qK~~iV----~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
++++. ..+-|..++ +.+.-..+.+++|||+.||+.|.+.|+++
T Consensus 164 -------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~ 212 (254)
T 3umc_A 164 -------------------------------LCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLK 212 (254)
T ss_dssp -------------------------------CCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred -------------------------------EeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCe
Confidence 00000 111233333 33332447799999999999999999999
Q ss_pred EEecCC---chH----HH--hhhcceecccchhhHHHH
Q 001304 767 VGISGR---EGL----QA--ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 767 Iam~g~---~~~----~a--~~~AD~vl~~f~~l~~ll 795 (1104)
++|... .+. +. +..||+++.++..|..++
T Consensus 213 ~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 213 TAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp EEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred EEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 988321 121 12 457899999987776654
No 108
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=97.46 E-value=0.00017 Score=76.84 Aligned_cols=119 Identities=10% Similarity=0.062 Sum_probs=81.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++. +++.++|+.....+..+...+|+. -+. ++ ..+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~-f~~---~~-----~~~---------------------- 163 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP-WDV---II-----GSD---------------------- 163 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC-CSC---CC-----CHH----------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC-eeE---EE-----EcC----------------------
Confidence 5679999999999997 999999999988888888888873 110 00 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-Hh---cCCeEEEEcCCccChhhhhhcCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KS---CDYRTLAIGDGGNDVRMIQKADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~---~~~~v~~iGDG~ND~~ml~~AdvGIa 768 (1104)
......| |..+++.+ +. ..+.+++|||+.||+.|.+.|+++++
T Consensus 164 -------------------------------~~~~~kp--~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~ 210 (254)
T 3umg_A 164 -------------------------------INRKYKP--DPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATA 210 (254)
T ss_dssp -------------------------------HHTCCTT--SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred -------------------------------cCCCCCC--CHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEE
Confidence 0001112 22333322 22 34679999999999999999999998
Q ss_pred ecCCc---hH----H--HhhhcceecccchhhHHHHH
Q 001304 769 ISGRE---GL----Q--AARAADYSIGKFRFLKRLIL 796 (1104)
Q Consensus 769 m~g~~---~~----~--a~~~AD~vl~~f~~l~~lll 796 (1104)
|.... +. + .+..+|+++.++..+..++.
T Consensus 211 ~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~ 247 (254)
T 3umg_A 211 FILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLR 247 (254)
T ss_dssp EECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHH
T ss_pred EEecCCcCCCCccccccccCCCceEECCHHHHHHHhc
Confidence 83321 11 1 24578999999888877653
No 109
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=97.45 E-value=0.00019 Score=72.86 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=66.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.+.++.|++.|++++++|+... .+.......|+...-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f------------------------------------- 124 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF------------------------------------- 124 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE-------------------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe-------------------------------------
Confidence 679999999999999999999998764 456666666652110
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHH-HHhcCC-eEEEEcCCccChhhhhhcCceEEecC
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL-LKSCDY-RTLAIGDGGNDVRMIQKADIGVGISG 771 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~-lk~~~~-~v~~iGDG~ND~~ml~~AdvGIam~g 771 (1104)
..++.+. . +....| |...++. +++.|- .+++|||+.||++|.+.|++++++ .
T Consensus 125 ~~~~~~~----------------------~-~~~~kp--~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~ 178 (190)
T 2fi1_A 125 TEVVTSS----------------------S-GFKRKP--NPESMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHL-F 178 (190)
T ss_dssp EEEECGG----------------------G-CCCCTT--SCHHHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEE-C
T ss_pred eeeeecc----------------------c-cCCCCC--CHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEE-E
Confidence 0000000 0 001111 2222222 222221 799999999999999999999887 4
Q ss_pred CchHHHhhhcc
Q 001304 772 REGLQAARAAD 782 (1104)
Q Consensus 772 ~~~~~a~~~AD 782 (1104)
+.+.+.++..+
T Consensus 179 ~~~~~~~~~l~ 189 (190)
T 2fi1_A 179 TSIVNLRQVLD 189 (190)
T ss_dssp SCHHHHHHHHT
T ss_pred CCCCChhhccC
Confidence 55655555544
No 110
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.43 E-value=0.00016 Score=74.33 Aligned_cols=120 Identities=10% Similarity=0.075 Sum_probs=78.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+ ++.|++. +++.++|+.....+..+...+|+...-.. ++.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~----------------------------- 120 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IFS----------------------------- 120 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EEe-----------------------------
Confidence 56799999 9999999 99999999998888888888887322110 100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
+. ..-...-.|+--..+.+.+. .+.+++|||+.||+.|.+.|++++.+-..
T Consensus 121 ------~~---------------------~~~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 171 (201)
T 2w43_A 121 ------AE---------------------SVKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNR 171 (201)
T ss_dssp ------GG---------------------GGTCCTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECS
T ss_pred ------hh---------------------hcCCCCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECC
Confidence 00 00000011222223444444 56799999999999999999999766222
Q ss_pred ---chHHHhhhcceecccchhhHHH
Q 001304 773 ---EGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 773 ---~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
........+|+++.++..+..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 172 KNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp SSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred CCCCccccCCCCCEEECCHHHHHHH
Confidence 1112233689998887666554
No 111
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=97.40 E-value=0.00016 Score=78.11 Aligned_cols=123 Identities=11% Similarity=0.051 Sum_probs=80.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++.|+++.++|+.... +..+...+|+...-.. ++.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~--~~~----------------------------- 153 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDF--VLT----------------------------- 153 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSC--EEE-----------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhE--EEe-----------------------------
Confidence 46799999999999999999999987654 5777778887332111 100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCceEEecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvGIam~g 771 (1104)
+. ..-...-.|.--..+.+.+.-..+.+++|||+. ||+.|.+.|++++.+.
T Consensus 154 ------~~---------------------~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~- 205 (263)
T 3k1z_A 154 ------SE---------------------AAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLV- 205 (263)
T ss_dssp ------HH---------------------HHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEE-
T ss_pred ------ec---------------------ccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEE-
Confidence 00 000011122222334444443457899999997 9999999999999883
Q ss_pred CchHHH------hhhcceecccchhhHHHH
Q 001304 772 REGLQA------ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 772 ~~~~~a------~~~AD~vl~~f~~l~~ll 795 (1104)
+.+... ...+|+++.+...+..++
T Consensus 206 ~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 206 VGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp CCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred cCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 222111 126899999988877665
No 112
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.39 E-value=0.00016 Score=77.60 Aligned_cols=123 Identities=16% Similarity=0.173 Sum_probs=80.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+ |+++.++|+.....+..+...+|+...-.. ++..+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--~~~~~--------------------------- 141 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA--VISVD--------------------------- 141 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGG---------------------------
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccE--EEEcc---------------------------
Confidence 67899999999999 999999999999888888888887322110 11000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
..-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++.+...
T Consensus 142 -----------------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 142 -----------------------------AKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp -----------------------------GGTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred -----------------------------ccCCCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 000001111112223333333346799999999999999999999877332
Q ss_pred c----------------------h----HHHhhhcceecccchhhHHHH
Q 001304 773 E----------------------G----LQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 773 ~----------------------~----~~a~~~AD~vl~~f~~l~~ll 795 (1104)
. + ...+..+|+++.++..+..++
T Consensus 193 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 193 LSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp SCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred cccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 0 1 112336899998887776654
No 113
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=97.32 E-value=0.00088 Score=71.46 Aligned_cols=117 Identities=13% Similarity=0.024 Sum_probs=76.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+ .|+++.++|+.....+.......|+...-..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 156 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR---------------------------------- 156 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC----------------------------------
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce----------------------------------
Confidence 56899999999999 9999999999988877777777776322111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCceEEe
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvGIam 769 (1104)
+++.-.| .--..+.+.+.-..+.+++|||+. ||+.|.+.|++++++
T Consensus 157 -------------------------------i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 157 -------------------------------IEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp -------------------------------EEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred -------------------------------eeeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEE
Confidence 1111112 111223333333457899999999 999999999999866
Q ss_pred cCCchH------H-H-hhhcce-ecccchhhHHHH
Q 001304 770 SGREGL------Q-A-ARAADY-SIGKFRFLKRLI 795 (1104)
Q Consensus 770 ~g~~~~------~-a-~~~AD~-vl~~f~~l~~ll 795 (1104)
-..... + . ...+|+ ++.++..+..++
T Consensus 206 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 206 TPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAV 240 (251)
T ss_dssp CCCC-------------CCTTEEECSSGGGHHHHH
T ss_pred ECCCCccccccccccccCCCCeeeeCCHHHHHHHH
Confidence 322111 1 1 235787 888877765543
No 114
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=97.32 E-value=0.00063 Score=70.81 Aligned_cols=59 Identities=22% Similarity=0.280 Sum_probs=39.4
Q ss_pred HHHHHhcCCeEEEEcCCccChhhhhhcCce--EEec-CCchHHH-hhhcceecccchhhHHHH
Q 001304 737 VELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGIS-GREGLQA-ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 737 V~~lk~~~~~v~~iGDG~ND~~ml~~AdvG--Iam~-g~~~~~a-~~~AD~vl~~f~~l~~ll 795 (1104)
.+.+.-..+.+++|||+.||+.|.+.|++. |++. |....+. ...+|+++.++..+..++
T Consensus 141 ~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 141 RDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp HHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred HHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 333433446799999999999999999965 4441 3222222 236899998877766543
No 115
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=97.27 E-value=0.00024 Score=74.80 Aligned_cols=122 Identities=11% Similarity=0.067 Sum_probs=78.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++ |+++.++|+.....+......++- .-. .+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~fd--~i------------------------------ 142 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EFD--HI------------------------------ 142 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CCS--EE------------------------------
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---ccC--EE------------------------------
Confidence 678999999999999 899999999988776666554331 000 00
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh---cCCeEEEEcCCc-cChhhhhhcCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS---CDYRTLAIGDGG-NDVRMIQKADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~---~~~~v~~iGDG~-ND~~ml~~AdvGIa 768 (1104)
+.+.. .....-.|.-...+++.++. ..+.+++|||+. ||+.|.+.|+++++
T Consensus 143 ----~~~~~---------------------~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (240)
T 3smv_A 143 ----ITAQD---------------------VGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197 (240)
T ss_dssp ----EEHHH---------------------HTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEE
T ss_pred ----EEccc---------------------cCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEE
Confidence 00000 00011233333344333433 346799999996 99999999999998
Q ss_pred ecCCc---------hHHH-hhhcceecccchhhHHHH
Q 001304 769 ISGRE---------GLQA-ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 769 m~g~~---------~~~a-~~~AD~vl~~f~~l~~ll 795 (1104)
+.... .... ...||+++.+...+..++
T Consensus 198 ~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 198 WIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp EECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred EEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 83221 1122 357899999877776654
No 116
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.25 E-value=0.00035 Score=71.14 Aligned_cols=41 Identities=22% Similarity=0.232 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC-HhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~ta~~ia~~~gi~ 653 (1104)
++.+++.++|+.|+++|++++++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 78888899998874
No 117
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=97.25 E-value=0.0031 Score=67.75 Aligned_cols=41 Identities=12% Similarity=0.160 Sum_probs=36.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~~ 654 (1104)
+-+++.++++.+++.|+++.++| |+..........+.|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 66889999999999999999999 999998888888888743
No 118
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=97.14 E-value=0.0023 Score=69.04 Aligned_cols=42 Identities=21% Similarity=0.367 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~~~ 655 (1104)
.+ ++++++|++++++|++++++| |+..........++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 799999999999999999999 8888888888889998543
No 119
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=97.09 E-value=0.0067 Score=65.38 Aligned_cols=43 Identities=21% Similarity=0.194 Sum_probs=38.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~~ 654 (1104)
+++-+++.++|+.++++|++++++| |+.........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5677899999999999999999999 899888888888988743
No 120
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=97.06 E-value=0.0012 Score=67.18 Aligned_cols=129 Identities=11% Similarity=0.104 Sum_probs=80.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCH---hHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQ---NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~---~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1104)
++.+++.++++.|+++|+++.++|+... ..+..+...+|+...-.. ++. .+...
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~--i~~-~~~~~-------------------- 90 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDF--IYA-SNSEL-------------------- 90 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEE--EEE-CCTTS--------------------
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEE--EEE-ccccc--------------------
Confidence 5889999999999999999999998876 788888888887321100 000 00000
Q ss_pred CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCC-ccChhhhhhcCceEE
Q 001304 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVG 768 (1104)
Q Consensus 690 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG-~ND~~ml~~AdvGIa 768 (1104)
...-+..-.|+--..+.+.+.-....+++|||+ .+|+.+-+.|++...
T Consensus 91 -------------------------------~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i 139 (189)
T 3ib6_A 91 -------------------------------QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAI 139 (189)
T ss_dssp -------------------------------STTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEE
T ss_pred -------------------------------cccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 000001112222233344443345789999999 799999999999764
Q ss_pred ecCCchH-----HHhh-hcceecc--cchhhHHHH
Q 001304 769 ISGREGL-----QAAR-AADYSIG--KFRFLKRLI 795 (1104)
Q Consensus 769 m~g~~~~-----~a~~-~AD~vl~--~f~~l~~ll 795 (1104)
.-.+... .... .+|+++. +...+..++
T Consensus 140 ~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 140 WLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp EECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred EECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 3222221 1111 6799998 777776664
No 121
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=96.85 E-value=0.00099 Score=69.64 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=26.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
.++.+++.++|+.|+++|+++.++|+...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 46789999999999999999999999987
No 122
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=96.79 E-value=0.0013 Score=67.31 Aligned_cols=98 Identities=7% Similarity=-0.011 Sum_probs=66.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.| +++++|+.....+..+...+|+...-.. ++.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~--~~~----------------------------- 133 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLA--FFT----------------------------- 133 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSC--EEE-----------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcce--EEe-----------------------------
Confidence 36799999999999999 9999999998888888888886432111 110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEe
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
+. ..-...-.|+--..+++.+.-..+.+++|||+.||+.|.+.|++.+.+
T Consensus 134 ------~~---------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~ 183 (200)
T 3cnh_A 134 ------SS---------------------ALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQ 183 (200)
T ss_dssp ------HH---------------------HHSCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred ------ec---------------------ccCCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEE
Confidence 00 000001122222233444433456799999999999999999999877
No 123
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=96.75 E-value=0.0003 Score=72.79 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=30.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~ 649 (1104)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887776666555
No 124
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=96.74 E-value=0.0016 Score=68.10 Aligned_cols=59 Identities=19% Similarity=0.195 Sum_probs=41.8
Q ss_pred HHHHHhcCCeEEEEcCCc-cChhhhhhcCceEEecC--CchHHHhhhcceecccchhhHHHH
Q 001304 737 VELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISG--REGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 737 V~~lk~~~~~v~~iGDG~-ND~~ml~~AdvGIam~g--~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
.+.+.-..+.+++|||+. ||+.|.+.|++++.+-. ....+....+|+++.++..+..++
T Consensus 165 ~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 165 LRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp HHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred HHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 333333457899999998 99999999999987622 211112447899999988876654
No 125
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=96.71 E-value=0.0037 Score=64.75 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=37.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+++.++++.|++.|+++.++|+.....+....+.+|+.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~ 124 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC
Confidence 46799999999999999999999999999999999999884
No 126
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=96.63 E-value=0.0033 Score=67.60 Aligned_cols=117 Identities=21% Similarity=0.211 Sum_probs=78.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++ |+++.++|+.....+..+...+|+...-.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~----------------------------------- 164 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD----------------------------------- 164 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhh-----------------------------------
Confidence 577999999999998 59999999999888888888888732211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCC-ccChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG-~ND~~ml~~Adv 765 (1104)
..+++.- .|+--..+.+.+.-..+.+++|||+ .||+.+-+.|++
T Consensus 165 -----------------------------~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~ 215 (260)
T 2gfh_A 165 -----------------------------AIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGL 215 (260)
T ss_dssp -----------------------------EEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred -----------------------------eEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCC
Confidence 1111111 1221222333333344679999995 999999999999
Q ss_pred --eEEecCCchH--HHhhhcceecccchhhHHH
Q 001304 766 --GVGISGREGL--QAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 766 --GIam~g~~~~--~a~~~AD~vl~~f~~l~~l 794 (1104)
+|++.+.... .....+|+++.+...+..+
T Consensus 216 ~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~ 248 (260)
T 2gfh_A 216 KATVWINKSGRVPLTSSPMPHYMVSSVLELPAL 248 (260)
T ss_dssp SEEEEECTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred ceEEEEcCCCCCcCcccCCCCEEECCHHHHHHH
Confidence 5777322111 1223689998887766554
No 127
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=96.46 E-value=0.00041 Score=71.40 Aligned_cols=39 Identities=8% Similarity=0.091 Sum_probs=29.3
Q ss_pred HHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCch
Q 001304 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREG 774 (1104)
Q Consensus 735 ~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~ 774 (1104)
.+.+.+.-..+.+++|||+.||+.|.+.|+++..+ .+.+
T Consensus 156 ~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~-~~~~ 194 (206)
T 2b0c_A 156 HVLQAEGFSPSDTVFFDDNADNIEGANQLGITSIL-VKDK 194 (206)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEE-CCST
T ss_pred HHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEE-ecCC
Confidence 34444443456899999999999999999998876 3444
No 128
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=96.41 E-value=0.0016 Score=68.94 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=40.9
Q ss_pred hHHHHHHHHHh----cCCeEEEEcCC-ccChhhhhhcCceEEe--cCCch-HHHh---hhcceecccchhh
Q 001304 732 QKAQLVELLKS----CDYRTLAIGDG-GNDVRMIQKADIGVGI--SGREG-LQAA---RAADYSIGKFRFL 791 (1104)
Q Consensus 732 qK~~iV~~lk~----~~~~v~~iGDG-~ND~~ml~~AdvGIam--~g~~~-~~a~---~~AD~vl~~f~~l 791 (1104)
.|...++.+.+ ..+.+++|||+ .||+.|++.|++++++ .|+.. .+.+ ..+|+++.+...+
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 35555554443 34689999999 7999999999999654 24433 2333 3689998876544
No 129
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=96.28 E-value=0.012 Score=60.08 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=30.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia 647 (1104)
++.+++.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999999887664433
No 130
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=96.19 E-value=0.0022 Score=60.90 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=34.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|+++.++|+.....+..+.+.+|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 3567899999999999999999999988877777777665
No 131
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=96.10 E-value=0.014 Score=66.10 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999988888888843
No 132
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=96.06 E-value=0.0028 Score=66.45 Aligned_cols=35 Identities=9% Similarity=0.069 Sum_probs=29.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL 648 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~ 648 (1104)
++.+++.++++.|++. +++.++|+.....+..+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 3668999999999999 9999999998887776553
No 133
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=96.04 E-value=0.048 Score=59.90 Aligned_cols=43 Identities=21% Similarity=0.243 Sum_probs=36.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~ 653 (1104)
.+++-+++.++++.|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 57777777777788874
No 134
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=95.89 E-value=0.013 Score=62.41 Aligned_cols=119 Identities=15% Similarity=0.191 Sum_probs=75.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
..++.+++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-.. +
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--i----------------------------- 160 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--I----------------------------- 160 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--E-----------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--e-----------------------------
Confidence 34678999999999999999999888764 35566777787432110 0
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc-eEEe
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIam 769 (1104)
+.++ ..-...=.|+-=..+++.+.-..+.+++|||+.+|+.+-+.|++ .|++
T Consensus 161 ------~~~~---------------------~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v 213 (250)
T 4gib_A 161 ------ADAG---------------------KCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGV 213 (250)
T ss_dssp ------CCGG---------------------GCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred ------eccc---------------------ccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEE
Confidence 0000 00001112222223444444345789999999999999999998 5577
Q ss_pred cCCchHHHhhhcceecccchhhH
Q 001304 770 SGREGLQAARAADYSIGKFRFLK 792 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l~ 792 (1104)
++.. -...||+++.+++.|.
T Consensus 214 -~~~~--~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 214 -GNYE--NLKKANLVVDSTNQLK 233 (250)
T ss_dssp -SCTT--TTTTSSEEESSGGGCC
T ss_pred -CChh--HhccCCEEECChHhCC
Confidence 3322 2346899998877663
No 135
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=95.76 E-value=0.012 Score=62.43 Aligned_cols=43 Identities=9% Similarity=0.183 Sum_probs=36.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHh----HHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~----ta~~ia~~~gi~ 653 (1104)
+.++.|++.+.++.|+++|+++.++||++.. .+..-.+++||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4678999999999999999999999999753 666667778884
No 136
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=95.38 E-value=0.025 Score=58.67 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=34.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+++.++++.|+++|+++.++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5779999999999999999999999866 467777778873
No 137
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=95.20 E-value=0.0081 Score=60.32 Aligned_cols=40 Identities=30% Similarity=0.383 Sum_probs=33.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC---------------CHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD---------------KQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD---------------~~~ta~~ia~~~gi 652 (1104)
++.|++.++++.|+++|+++.++|+. ....+..+....|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999997 34556666677776
No 138
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=95.16 E-value=0.046 Score=57.12 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=35.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
-++.+++.++++.|+++| ++.++|+.....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888877776
No 139
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=94.98 E-value=0.018 Score=61.17 Aligned_cols=43 Identities=16% Similarity=0.139 Sum_probs=36.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCH----hHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~----~ta~~ia~~~gi~ 653 (1104)
++++.|++.+.++.|+++|+++.++||++. ..+..-.+..|+-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 467899999999999999999999999975 3556666778874
No 140
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=94.56 E-value=0.62 Score=46.68 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=37.1
Q ss_pred EEecChHHhhhhhhccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcc
Q 001304 521 LLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600 (1104)
Q Consensus 521 l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~ 600 (1104)
.+.-|..+.|-..-. ...+.....++++..+|..++.+| .
T Consensus 133 ~v~iGn~~~m~~~gi--~i~~~~~~~~~~~~~~G~T~V~va--------------------------------------i 172 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL--VINNDVNDFMTEHERKGRTAVLVA--------------------------------------V 172 (185)
T ss_dssp EEEEECHHHHHHHTC--CCCHHHHHHHHHHHHTTCEEEEEE--------------------------------------E
T ss_pred EEEECCHHHHHHcCC--CCCHHHHHHHHHHHhCCCeEEEEE--------------------------------------E
Confidence 455688776644211 112345566778888999999888 4
Q ss_pred CcEEEEEEeeccc
Q 001304 601 DLKVLGVTAIEDR 613 (1104)
Q Consensus 601 ~l~llG~i~i~D~ 613 (1104)
|-.++|++++.|+
T Consensus 173 dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 DDELCGLIAIADT 185 (185)
T ss_dssp TTEEEEEEEEECC
T ss_pred CCEEEEEEEEEcC
Confidence 6789999999995
No 141
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=94.51 E-value=0.033 Score=62.62 Aligned_cols=34 Identities=15% Similarity=0.154 Sum_probs=32.2
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~ 649 (1104)
+++++.|+.|+++|+++.++|+.+...+..++++
T Consensus 259 pgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~ 292 (387)
T 3nvb_A 259 TEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFER 292 (387)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 6789999999999999999999999999999987
No 142
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=94.39 E-value=0.044 Score=58.58 Aligned_cols=43 Identities=14% Similarity=0.219 Sum_probs=34.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHh---HHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN---TAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~---ta~~ia~~~gi~ 653 (1104)
+.++.+++.++|+.|+++|+++.++||+... .+......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 3567899999999999999999999999843 444555667774
No 143
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=94.38 E-value=0.14 Score=54.16 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=32.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~~ 654 (1104)
.++.-+++.++++.++++|++++++| |.............|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 34455788999999999999999999 666666666666777643
No 144
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=94.10 E-value=0.075 Score=56.89 Aligned_cols=39 Identities=10% Similarity=0.198 Sum_probs=33.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
-++.+++.++++.|+++|+++.++|+.+...+..+....
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468899999999999999999999999888777666543
No 145
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=93.98 E-value=0.057 Score=59.16 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=28.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
++++.+++.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 45678999999999999999999999998543
No 146
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=91.88 E-value=0.087 Score=58.19 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=37.7
Q ss_pred eecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 609 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 609 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
.....+.++..+.++.|+++|++||++||-..+.+..+|...
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344467899999999999999999999999999999999875
No 147
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=90.83 E-value=0.47 Score=50.39 Aligned_cols=40 Identities=13% Similarity=0.208 Sum_probs=32.9
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH----cCCCC
Q 001304 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS----CNFIS 654 (1104)
Q Consensus 615 r~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~----~gi~~ 654 (1104)
-+++.++++.+++.|+++.++||+...+...++.. +|+..
T Consensus 23 ~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 23 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 36788999999999999999999988777666654 78743
No 148
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=90.47 E-value=0.26 Score=51.83 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=32.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.++.+++.+.++.|+++|+++.++|+... +..+....|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 45789999999999999999999998653 44556677763
No 149
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=89.96 E-value=0.051 Score=56.19 Aligned_cols=28 Identities=14% Similarity=0.266 Sum_probs=24.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHh
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQN 641 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ 641 (1104)
+.+++.++++.|+++|+++.++||....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 4568999999999999999999998653
No 150
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=89.28 E-value=2.8 Score=44.31 Aligned_cols=41 Identities=32% Similarity=0.339 Sum_probs=33.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH---cCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS---CNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~---~gi~ 653 (1104)
.+-+++.++++.++++|+++.++||+...+...++.+ +|+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 17 RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 3347899999999999999999999998777766665 5663
No 151
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=89.15 E-value=0.44 Score=45.42 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCC---HhHHHHHHHHcCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFI 653 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~---~~ta~~ia~~~gi~ 653 (1104)
+.+++.++|++++++|++++++||++ ...+...+.+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 56667777888873
No 152
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=85.55 E-value=1.1 Score=51.40 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=24.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDK 639 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~ 639 (1104)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
No 153
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=84.44 E-value=0.79 Score=54.07 Aligned_cols=26 Identities=23% Similarity=0.321 Sum_probs=24.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++.+++.++++.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999985
No 154
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=80.67 E-value=0.51 Score=51.31 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=24.8
Q ss_pred CCCccccccccccccc---------cceEEEEecCCCCCCCcce
Q 001304 357 TDTPSHATNTAISEDL---------AQVEYILTDKTGTLTENRM 391 (1104)
Q Consensus 357 ~~~~~~~~~~~~~E~L---------g~v~~I~~DKTGTLT~n~m 391 (1104)
.+..+++|++..+|.+ .++. |+||||||||+...
T Consensus 17 ~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 17 QKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp TSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred hcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 3445889998888773 4555 56799999998654
No 155
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=78.17 E-value=0.7 Score=46.78 Aligned_cols=41 Identities=12% Similarity=-0.001 Sum_probs=37.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
=.+||++.+.++.|++. +++.+.|.-....|..+...+++.
T Consensus 67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 35799999999999998 999999999999999999998873
No 156
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=77.72 E-value=52 Score=31.75 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=23.0
Q ss_pred EecChHHhhhhhhccCCchhHHHHHHHHHHhccceEEEEE
Q 001304 522 LSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLA 561 (1104)
Q Consensus 522 ~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A 561 (1104)
+.=|..+-+-..-. .....+...+..+..+|..++.+|
T Consensus 115 v~iGn~~~m~~~gi--~~~~~~~~~~~~~~~~G~T~v~va 152 (165)
T 2arf_A 115 VLIGNREWLRRNGL--TISSDVSDAMTDHEMKGQTAILVA 152 (165)
T ss_dssp EEEECHHHHHHHHC--SSCHHHHHHHHHHHTTTSEEEEEE
T ss_pred EEEcCHHHHHhcCC--CCCHHHHHHHHHHHhCCCeEEEEE
Confidence 34477766543211 112345556677888999999888
No 157
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=76.89 E-value=2.3 Score=44.85 Aligned_cols=35 Identities=3% Similarity=-0.023 Sum_probs=28.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
-++.+++.++++. |+++.++|+.+...+..+...+
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence 3567788877777 9999999999988777776665
No 158
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=76.05 E-value=0.93 Score=45.26 Aligned_cols=40 Identities=13% Similarity=0.020 Sum_probs=37.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.+||++.+.++.+++. +++.+.|.-....|..+...++..
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 5799999999999998 999999999999999999998863
No 159
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=72.51 E-value=6.5 Score=38.56 Aligned_cols=25 Identities=12% Similarity=0.280 Sum_probs=23.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++.||+.++++.|++ ++++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 678999999999998 4999999997
No 160
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=64.94 E-value=4.7 Score=37.29 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=26.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
++.+++.++++.++++|+++.++||+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 456789999999999999999999998643
No 161
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=52.31 E-value=3.4 Score=41.24 Aligned_cols=41 Identities=5% Similarity=0.053 Sum_probs=34.3
Q ss_pred ccCCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 612 DRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
-++.+++.++++.|+++ |+++.++|+.....+..+...+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999987766666666554
No 162
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=49.64 E-value=16 Score=36.26 Aligned_cols=36 Identities=22% Similarity=0.497 Sum_probs=28.7
Q ss_pred eEEEEEECCeEEEEeccCCccceEEEEecCCcccce
Q 001304 101 KEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136 (1104)
Q Consensus 101 ~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD 136 (1104)
-+..+.++|+.+.+++++|++||.|.+..|..++.|
T Consensus 103 Hp~~v~~~g~~~w~~A~eLk~GD~v~~~~~~~~~~~ 138 (186)
T 2jmz_A 103 HPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINLD 138 (186)
T ss_dssp CEEEEEETTEEEEEEGGGCCTTSEEEEECSSSEEEE
T ss_pred CEEEEeCCCeEEEEEhhcCCCCCEEEecccCCccce
Confidence 456777888888999999999999998776555544
No 163
>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*
Probab=48.50 E-value=22 Score=41.25 Aligned_cols=37 Identities=14% Similarity=0.314 Sum_probs=33.1
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc-CC
Q 001304 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-NF 652 (1104)
Q Consensus 615 r~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~-gi 652 (1104)
.++++..++.|+++| |+.++|.-+..-+..++..+ |+
T Consensus 248 dp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~ 285 (555)
T 2jc9_A 248 DGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDF 285 (555)
T ss_dssp CTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCS
T ss_pred ChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCC
Confidence 357899999999999 99999999999998888887 74
No 164
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=42.31 E-value=6.9 Score=39.08 Aligned_cols=40 Identities=8% Similarity=0.052 Sum_probs=32.8
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++ |+++.++|+.....+..+....|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5789999999999999 999999999877665555555554
No 165
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=41.72 E-value=17 Score=38.60 Aligned_cols=47 Identities=15% Similarity=0.025 Sum_probs=31.1
Q ss_pred cCCeEEEEcCCc-cChhhhhhcCceE-Ee-cCCc-hHHHh-------hhcceecccch
Q 001304 743 CDYRTLAIGDGG-NDVRMIQKADIGV-GI-SGRE-GLQAA-------RAADYSIGKFR 789 (1104)
Q Consensus 743 ~~~~v~~iGDG~-ND~~ml~~AdvGI-am-~g~~-~~~a~-------~~AD~vl~~f~ 789 (1104)
..+.++||||.. +|+.+-+.|++.. .+ .|.. ..+.. ..+|+++.+..
T Consensus 224 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~ 281 (284)
T 2hx1_A 224 SKREILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAV 281 (284)
T ss_dssp CGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSC
T ss_pred CcceEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchh
Confidence 346799999995 9999999999865 33 2221 11222 25788877643
No 166
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=38.85 E-value=17 Score=39.67 Aligned_cols=49 Identities=8% Similarity=0.048 Sum_probs=40.4
Q ss_pred EEEeecccCCCChHHHHHHHH-Hc----------CCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 606 GVTAIEDRLQDGVPETIETLR-KA----------GINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~-~a----------GI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
|++.+..++.++..++++++. .+ |+.++++|||.......++.+.|+..
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 36 SWIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp CEEEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred eEEEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 344556677888889998888 33 79999999999999999999999854
No 167
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=37.66 E-value=33 Score=33.94 Aligned_cols=34 Identities=21% Similarity=0.217 Sum_probs=27.6
Q ss_pred eEEEEEECCeEEEEeccCCccceEEEEecCCccc
Q 001304 101 KEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVP 134 (1104)
Q Consensus 101 ~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vP 134 (1104)
.+..+.++|+.+.+++++|++||.|.+..++..|
T Consensus 93 H~~~v~~~g~~~~~~A~eLk~GD~v~v~~~~~~~ 126 (185)
T 2lcj_A 93 HPVLVYENGRFIEKRAFEVKEGDKVLVSELELVE 126 (185)
T ss_dssp SEEEEEETTEEEEEEGGGCCTTCEEEECCCCCSC
T ss_pred CEEEEecCCeEEEEEHHHCCCCCEEEEccccccc
Confidence 3556678888889999999999999998776444
No 168
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=37.50 E-value=1.4e+02 Score=27.53 Aligned_cols=81 Identities=7% Similarity=0.124 Sum_probs=56.1
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
.-+...|++|+-++. ..+.++..+ .-.+.+-..+|+-+....-.+.+++.++.|++
T Consensus 25 ~~l~~~G~~Vi~lG~-~~p~e~~v~-----------------------~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~ 80 (137)
T 1ccw_A 25 HAFTNAGFNVVNIGV-LSPQELFIK-----------------------AAIETKADAILVSSLYGQGEIDCKGLRQKCDE 80 (137)
T ss_dssp HHHHHTTCEEEEEEE-EECHHHHHH-----------------------HHHHHTCSEEEEEECSSTHHHHHTTHHHHHHH
T ss_pred HHHHHCCCEEEECCC-CCCHHHHHH-----------------------HHHhcCCCEEEEEecCcCcHHHHHHHHHHHHh
Confidence 456779999999886 455554322 12345778888888887777788899999999
Q ss_pred cCC--eEEEEcCCC------HhHHHHHHHHcCC
Q 001304 628 AGI--NFWMLTGDK------QNTAIQIALSCNF 652 (1104)
Q Consensus 628 aGI--~v~mlTGD~------~~ta~~ia~~~gi 652 (1104)
+|. ..+++-|-. .......+++.|.
T Consensus 81 ~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~ 113 (137)
T 1ccw_A 81 AGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY 113 (137)
T ss_dssp TTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC
T ss_pred cCCCCCEEEEECCCcCchHhhhhhHHHHHHCCC
Confidence 885 234566643 2223456888887
No 169
>1d1n_A Initiation factor 2; beta-barrel, gene regulation; NMR {Geobacillus stearothermophilus} SCOP: b.43.3.1
Probab=37.38 E-value=33 Score=30.02 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=27.2
Q ss_pred ceEEEEEECCeEEE--------------------------E-eccCCccceEEEEecCCcccc
Q 001304 100 EKEVWVVKQGIKKL--------------------------I-QSQDIRVGNIVWLRENDEVPC 135 (1104)
Q Consensus 100 ~~~~~V~r~g~~~~--------------------------i-~~~~lvvGDIV~l~~g~~vPa 135 (1104)
+.+++|+|||.... + .+.|+++||+|....-..+|.
T Consensus 36 ~~~vRv~Rd~~vI~eG~i~SLkr~KddV~EV~~G~ECGi~l~~~~dik~GD~Ie~ye~~ev~r 98 (99)
T 1d1n_A 36 DSKVRLIRQGIVVYEGEIDSLKRYKDDVREVAQGYECGLTIKNFNDIKEGDVIEAYVMQEVAR 98 (99)
T ss_dssp SSEEEEECSSSEEEEEECSEEECSSSCCSCCBTTCEEEEECTTCSSCSSCSEEEEECCSCCCC
T ss_pred CCeEEEEECCEEEEEeEEhhhcccccccceECCCcEEEEEEcCcCCCCCCCEEEEEEEEEEcC
Confidence 55789999986432 1 478999999999887766663
No 170
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=37.01 E-value=21 Score=37.73 Aligned_cols=43 Identities=14% Similarity=0.308 Sum_probs=36.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcC---CCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~ta~~ia~~~gi~ 653 (1104)
.+++-+++.++|+.++++|++++++|| +.........+.+|+.
T Consensus 28 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 28 YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 345668999999999999999999996 7777777778888874
No 171
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=34.67 E-value=22 Score=39.21 Aligned_cols=48 Identities=17% Similarity=0.225 Sum_probs=36.0
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCC----HhHHHHHHHHcCCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDK----QNTAIQIALSCNFI 653 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~----~~ta~~ia~~~gi~ 653 (1104)
|.+.-.+.+-+++.++++.|+++|+++.++|+.. ...+..+.+.+|+-
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 3344456677999999999999999999999875 33445555568874
No 172
>2crv_A IF-2MT, translation initiation factor IF-2; ribosome, beta barrel, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=32.40 E-value=52 Score=29.87 Aligned_cols=22 Identities=23% Similarity=0.487 Sum_probs=18.2
Q ss_pred ecc-CCccceEEEEecCCcccce
Q 001304 115 QSQ-DIRVGNIVWLRENDEVPCD 136 (1104)
Q Consensus 115 ~~~-~lvvGDIV~l~~g~~vPaD 136 (1104)
.+. |+++||+|....-..+|-.
T Consensus 85 ~fniDik~GDiIE~ye~~ev~r~ 107 (120)
T 2crv_A 85 EEKVEFKPGDQVICYEENKVPTK 107 (120)
T ss_dssp CTTSCCCTTEEEEEECCSCCCCC
T ss_pred cCCCCCCCCCEEEEEEEEEEeeE
Confidence 477 9999999998887777765
No 173
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=27.70 E-value=2e+02 Score=31.52 Aligned_cols=41 Identities=22% Similarity=0.216 Sum_probs=36.7
Q ss_pred ccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCC
Q 001304 599 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDK 639 (1104)
Q Consensus 599 e~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~ 639 (1104)
..+...++++|--|++-.|=+..|++++++|..+.+.||+-
T Consensus 49 ~~~~~~v~~lG~FDg~H~GHq~lI~~a~~~~~~~~Vms~~~ 89 (357)
T 3gmi_A 49 ENKDKIVCDFTEYNPLHKGHKYALEKGKEHGIFISVLPGPL 89 (357)
T ss_dssp HTCCCEEEEECCCTTCCHHHHHHHHHHHTSSEEEEEECCTT
T ss_pred CCCCCEEEEEEecCccCHHHHHHHHHHHHcCCeEEEEcCch
Confidence 35667999999999999999999999999889999999864
No 174
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=23.96 E-value=1.2e+02 Score=28.42 Aligned_cols=29 Identities=21% Similarity=0.134 Sum_probs=22.9
Q ss_pred EEEEEEC--CeEEEEeccCCccceEEEEecC
Q 001304 102 EVWVVKQ--GIKKLIQSQDIRVGNIVWLREN 130 (1104)
Q Consensus 102 ~~~V~r~--g~~~~i~~~~lvvGDIV~l~~g 130 (1104)
.+.+..+ |....+.+++|++||.|.+..|
T Consensus 73 ~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~ 103 (145)
T 1at0_A 73 LVSVWQPESQKLTFVFADRIEEKNQVLVRDV 103 (145)
T ss_dssp EEEEEETTTTEEEEEEGGGCCTTCEEEEECT
T ss_pred EEEEecCCCCcEEEEEHHHCcCCCEEEEecC
Confidence 4555555 4577899999999999999877
No 175
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=21.81 E-value=2.1e+02 Score=27.25 Aligned_cols=81 Identities=15% Similarity=0.205 Sum_probs=55.8
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
.-+...|++|+.++.. .+.++..+ .-.+.+-.++|+.+....-.+.+++.++.|++
T Consensus 40 ~~l~~~G~eVi~lG~~-~p~e~lv~-----------------------aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~ 95 (161)
T 2yxb_A 40 RALRDAGFEVVYTGLR-QTPEQVAM-----------------------AAVQEDVDVIGVSILNGAHLHLMKRLMAKLRE 95 (161)
T ss_dssp HHHHHTTCEEECCCSB-CCHHHHHH-----------------------HHHHTTCSEEEEEESSSCHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHhcCCCEEEEEeechhhHHHHHHHHHHHHh
Confidence 3466789999987743 34433221 12346788999999888888899999999999
Q ss_pred cCC--eEEEEcCCCHhHHHHHHHHcCC
Q 001304 628 AGI--NFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 628 aGI--~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
+|. -.+++-|-....-...+++.|.
T Consensus 96 ~g~~~i~v~vGG~~~~~~~~~l~~~G~ 122 (161)
T 2yxb_A 96 LGADDIPVVLGGTIPIPDLEPLRSLGI 122 (161)
T ss_dssp TTCTTSCEEEEECCCHHHHHHHHHTTC
T ss_pred cCCCCCEEEEeCCCchhcHHHHHHCCC
Confidence 985 2355567654444455778887
No 176
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=20.67 E-value=1.1e+02 Score=23.55 Aligned_cols=45 Identities=11% Similarity=0.044 Sum_probs=35.7
Q ss_pred CCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCce
Q 001304 118 DIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLK 163 (1104)
Q Consensus 118 ~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~ 163 (1104)
++.+||.|++..|.--=-.|.+.+-+..++.+.|.-+.+. ...|+
T Consensus 4 ~~~~Gd~V~V~~Gpf~g~~g~v~~v~~~k~~v~V~v~~~G-r~t~v 48 (58)
T 1nz9_A 4 AFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFG-RETPV 48 (58)
T ss_dssp SCCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEEEESSS-SEEEE
T ss_pred ccCCCCEEEEeecCCCCcEEEEEEEcCCCCEEEEEEEeCC-CEEEE
Confidence 5789999999999988899999988765678888866654 44444
No 177
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=20.11 E-value=1.2e+02 Score=31.46 Aligned_cols=79 Identities=15% Similarity=0.083 Sum_probs=54.5
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
.-+...|++|+.++.. .+.++..+ .-.+.+-..+|+.+...+-.+..++.++.|++
T Consensus 145 ~~L~~~G~~Vi~LG~~-vp~e~l~~-----------------------~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~ 200 (258)
T 2i2x_B 145 ALLRANGYNVVDLGRD-VPAEEVLA-----------------------AVQKEKPIMLTGTALMTTTMYAFKEVNDMLLE 200 (258)
T ss_dssp HHHHHTTCEEEEEEEE-CCSHHHHH-----------------------HHHHHCCSEEEEECCCTTTTTHHHHHHHHHHT
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEEeeccCCHHHHHHHHHHHHh
Confidence 3467899999999976 45444321 12235788999999888888899999999999
Q ss_pred cCCeEE-EEcCCCHhHHHHHHHHcCC
Q 001304 628 AGINFW-MLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 628 aGI~v~-mlTGD~~~ta~~ia~~~gi 652 (1104)
+|.++. ++-|-.. + ...+.++|-
T Consensus 201 ~~~~~~v~vGG~~~-~-~~~~~~iga 224 (258)
T 2i2x_B 201 NGIKIPFACGGGAV-N-QDFVSQFAL 224 (258)
T ss_dssp TTCCCCEEEESTTC-C-HHHHHTSTT
T ss_pred cCCCCcEEEECccC-C-HHHHHHcCC
Confidence 997654 4445433 2 345666663
Done!