Query 001306
Match_columns 1104
No_of_seqs 271 out of 540
Neff 4.4
Searched_HMMs 46136
Date Thu Mar 28 21:21:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001306.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001306hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3724 Negative regulator of 100.0 2E-149 5E-154 1295.3 45.6 925 14-1084 20-972 (973)
2 PF07819 PGAP1: PGAP1-like pro 100.0 2.9E-55 6.3E-60 464.1 21.2 225 80-356 1-225 (225)
3 PF06028 DUF915: Alpha/beta hy 99.1 1.5E-09 3.3E-14 118.6 13.7 225 80-354 8-253 (255)
4 PLN02824 hydrolase, alpha/beta 99.1 2.1E-09 4.6E-14 115.9 14.5 99 82-244 28-137 (294)
5 PRK03592 haloalkane dehalogena 99.0 3.8E-09 8.2E-14 114.0 12.4 99 82-243 26-127 (295)
6 PRK11126 2-succinyl-6-hydroxy- 98.9 6.1E-09 1.3E-13 108.0 12.0 99 83-244 2-102 (242)
7 TIGR02240 PHA_depoly_arom poly 98.9 6.7E-09 1.4E-13 111.3 12.0 99 84-245 26-127 (276)
8 PRK00870 haloalkane dehalogena 98.9 1.7E-08 3.7E-13 109.7 14.5 130 36-242 14-148 (302)
9 PF12697 Abhydrolase_6: Alpha/ 98.9 7.6E-09 1.6E-13 102.0 10.2 97 86-245 1-102 (228)
10 PRK10673 acyl-CoA esterase; Pr 98.9 1.1E-08 2.4E-13 106.7 12.0 99 81-242 14-114 (255)
11 PRK10349 carboxylesterase BioH 98.8 1.1E-08 2.5E-13 107.7 9.9 95 82-243 11-108 (256)
12 PLN02679 hydrolase, alpha/beta 98.8 1.9E-08 4.1E-13 113.5 11.9 101 82-244 87-191 (360)
13 TIGR03056 bchO_mg_che_rel puta 98.8 5.3E-08 1.1E-12 101.9 12.9 101 82-245 27-131 (278)
14 PLN02965 Probable pheophorbida 98.7 3.3E-08 7.2E-13 104.9 9.8 99 84-243 4-106 (255)
15 PF05057 DUF676: Putative seri 98.7 3.5E-08 7.6E-13 104.8 9.9 46 205-250 77-131 (217)
16 TIGR01738 bioH putative pimelo 98.7 4.3E-08 9.2E-13 98.7 9.6 95 82-243 2-99 (245)
17 TIGR03695 menH_SHCHC 2-succiny 98.7 1E-07 2.2E-12 95.4 12.1 98 84-243 2-104 (251)
18 PLN02578 hydrolase 98.7 1.1E-07 2.3E-12 107.0 11.7 100 81-243 84-186 (354)
19 PLN03087 BODYGUARD 1 domain co 98.7 2.1E-07 4.6E-12 110.1 14.6 107 82-246 200-311 (481)
20 PRK10749 lysophospholipase L2; 98.6 2.2E-07 4.7E-12 103.5 13.1 103 84-244 55-166 (330)
21 TIGR03611 RutD pyrimidine util 98.6 2.6E-07 5.6E-12 94.5 12.6 99 82-243 12-114 (257)
22 PHA02857 monoglyceride lipase; 98.6 1.5E-07 3.2E-12 100.4 10.4 105 85-244 26-132 (276)
23 PRK03204 haloalkane dehalogena 98.6 2.2E-07 4.8E-12 101.3 11.9 100 82-244 33-136 (286)
24 TIGR01250 pro_imino_pep_2 prol 98.6 3.2E-07 6.9E-12 94.9 12.1 102 82-244 24-131 (288)
25 PLN03084 alpha/beta hydrolase 98.6 6.4E-07 1.4E-11 103.2 15.0 101 82-245 126-233 (383)
26 TIGR01836 PHA_synth_III_C poly 98.6 2.4E-07 5.2E-12 103.9 11.0 124 56-246 44-173 (350)
27 PLN02211 methyl indole-3-aceta 98.6 2.6E-07 5.6E-12 100.7 10.9 101 81-242 16-120 (273)
28 TIGR02427 protocat_pcaD 3-oxoa 98.6 1.8E-07 4E-12 94.2 9.0 98 85-245 15-115 (251)
29 PF12695 Abhydrolase_5: Alpha/ 98.5 6.9E-07 1.5E-11 85.4 11.7 93 85-242 1-93 (145)
30 PRK08775 homoserine O-acetyltr 98.5 1.6E-07 3.4E-12 104.9 8.1 74 148-245 99-174 (343)
31 PRK14875 acetoin dehydrogenase 98.5 4.7E-07 1E-11 100.3 11.7 103 82-247 130-235 (371)
32 PLN02652 hydrolase; alpha/beta 98.5 6.5E-07 1.4E-11 103.4 13.1 103 85-243 138-244 (395)
33 PLN02385 hydrolase; alpha/beta 98.5 4.7E-07 1E-11 101.3 11.0 103 84-243 88-196 (349)
34 PLN02298 hydrolase, alpha/beta 98.5 9.2E-07 2E-11 97.6 11.9 80 148-245 87-170 (330)
35 PRK07868 acyl-CoA synthetase; 98.5 7.5E-07 1.6E-11 113.3 12.4 131 56-245 45-178 (994)
36 TIGR03343 biphenyl_bphD 2-hydr 98.5 1.2E-06 2.7E-11 93.0 11.9 39 205-246 100-138 (282)
37 PRK06489 hypothetical protein; 98.4 5.4E-07 1.2E-11 101.5 9.5 106 83-243 69-188 (360)
38 PRK05855 short chain dehydroge 98.4 1.4E-06 3E-11 102.0 12.3 102 83-244 25-131 (582)
39 TIGR03101 hydr2_PEP hydrolase, 98.4 2.1E-06 4.5E-11 94.7 12.9 99 84-241 26-131 (266)
40 KOG2382 Predicted alpha/beta h 98.4 1.3E-06 2.9E-11 98.1 11.2 202 81-351 50-308 (315)
41 PRK10985 putative hydrolase; P 98.4 9.3E-07 2E-11 98.4 9.5 109 82-247 57-171 (324)
42 TIGR01838 PHA_synth_I poly(R)- 98.4 1.2E-06 2.6E-11 104.9 10.7 125 57-245 171-303 (532)
43 PLN02894 hydrolase, alpha/beta 98.3 3.3E-06 7.2E-11 97.5 12.9 102 82-243 104-210 (402)
44 TIGR03100 hydr1_PEP hydrolase, 98.3 7.7E-06 1.7E-10 89.2 14.3 105 83-245 26-135 (274)
45 TIGR01392 homoserO_Ac_trn homo 98.3 1.5E-06 3.2E-11 97.6 8.4 76 147-246 71-164 (351)
46 PLN02980 2-oxoglutarate decarb 98.3 3.9E-06 8.4E-11 111.9 13.4 98 82-242 1370-1478(1655)
47 PF01674 Lipase_2: Lipase (cla 98.3 1.8E-06 4E-11 92.9 8.2 114 84-250 2-129 (219)
48 KOG1454 Predicted hydrolase/ac 98.3 2E-06 4.4E-11 97.2 8.5 106 81-244 56-166 (326)
49 TIGR01249 pro_imino_pep_1 prol 98.2 3.2E-06 7E-11 92.8 7.2 74 148-245 53-131 (306)
50 PRK00175 metX homoserine O-ace 98.2 5.9E-06 1.3E-10 94.3 9.3 75 147-245 90-183 (379)
51 PLN02511 hydrolase 98.1 1E-05 2.3E-10 92.9 10.1 106 83-245 100-211 (388)
52 COG1647 Esterase/lipase [Gener 98.1 1.5E-05 3.2E-10 86.0 9.3 104 82-246 14-120 (243)
53 PLN02872 triacylglycerol lipas 98.0 4.3E-06 9.3E-11 96.9 4.6 125 56-241 51-194 (395)
54 PRK11071 esterase YqiA; Provis 98.0 3.4E-05 7.4E-10 80.5 10.8 76 85-225 3-80 (190)
55 COG4814 Uncharacterized protei 98.0 3.3E-05 7.2E-10 84.6 10.5 116 166-318 113-240 (288)
56 COG1075 LipA Predicted acetylt 98.0 1.5E-05 3.3E-10 90.4 8.1 112 82-250 58-170 (336)
57 PLN02733 phosphatidylcholine-s 98.0 1.2E-05 2.5E-10 94.6 7.3 46 205-250 161-207 (440)
58 COG2267 PldB Lysophospholipase 98.0 4.7E-05 1E-09 85.1 11.6 102 84-241 35-139 (298)
59 TIGR01840 esterase_phb esteras 98.0 0.00012 2.6E-09 76.8 13.7 56 171-245 75-131 (212)
60 TIGR01839 PHA_synth_II poly(R) 97.9 4.5E-05 9.7E-10 91.7 11.7 81 147-246 246-330 (560)
61 PRK10566 esterase; Provisional 97.9 6.5E-05 1.4E-09 79.2 11.7 90 83-225 27-126 (249)
62 PF00561 Abhydrolase_1: alpha/ 97.9 3.6E-05 7.8E-10 77.9 9.2 71 149-244 1-79 (230)
63 cd00707 Pancreat_lipase_like P 97.9 6.1E-05 1.3E-09 83.1 11.5 77 148-242 66-145 (275)
64 TIGR03230 lipo_lipase lipoprot 97.9 7.6E-05 1.6E-09 87.9 12.8 77 148-242 73-152 (442)
65 PRK13604 luxD acyl transferase 97.8 0.00017 3.6E-09 81.6 13.4 99 82-241 36-138 (307)
66 KOG4409 Predicted hydrolase/ac 97.8 5.4E-05 1.2E-09 86.2 9.3 73 148-241 116-192 (365)
67 COG0596 MhpC Predicted hydrola 97.8 0.00013 2.8E-09 71.8 10.7 100 85-245 23-124 (282)
68 PF10230 DUF2305: Uncharacteri 97.8 0.00019 4E-09 79.1 12.4 60 166-241 59-119 (266)
69 PRK07581 hypothetical protein; 97.8 3E-05 6.5E-10 86.2 6.2 38 205-245 122-160 (339)
70 PF00975 Thioesterase: Thioest 97.8 6.5E-05 1.4E-09 78.2 7.9 103 85-245 2-105 (229)
71 PF02450 LCAT: Lecithin:choles 97.7 5E-05 1.1E-09 87.9 7.4 47 205-251 118-167 (389)
72 KOG4178 Soluble epoxide hydrol 97.7 0.00019 4E-09 81.3 10.9 104 81-246 42-150 (322)
73 PRK05077 frsA fermentation/res 97.7 0.00024 5.1E-09 82.9 11.2 79 148-245 222-301 (414)
74 KOG2564 Predicted acetyltransf 97.6 0.00021 4.6E-09 79.4 9.6 72 150-241 104-179 (343)
75 PLN00021 chlorophyllase 97.6 0.00021 4.6E-09 80.7 9.8 114 82-245 51-166 (313)
76 TIGR01607 PST-A Plasmodium sub 97.6 0.00027 5.9E-09 79.7 10.5 40 205-244 141-185 (332)
77 PRK11460 putative hydrolase; P 97.5 0.0011 2.3E-08 71.3 12.2 119 83-242 16-136 (232)
78 KOG1455 Lysophospholipase [Lip 97.4 0.00049 1.1E-08 77.4 9.5 78 148-241 82-161 (313)
79 PLN02606 palmitoyl-protein thi 97.2 0.0017 3.8E-08 73.3 10.9 59 167-246 75-134 (306)
80 KOG1552 Predicted alpha/beta h 97.2 0.0024 5.2E-08 70.5 11.4 184 84-356 61-252 (258)
81 PF02089 Palm_thioest: Palmito 97.1 0.0012 2.7E-08 73.8 8.4 108 82-246 4-118 (279)
82 PLN02442 S-formylglutathione h 97.1 0.007 1.5E-07 67.0 14.1 37 205-245 142-179 (283)
83 TIGR02821 fghA_ester_D S-formy 97.1 0.0039 8.5E-08 68.3 11.5 35 205-243 137-172 (275)
84 TIGR03502 lipase_Pla1_cef extr 97.1 0.0024 5.1E-08 80.1 10.8 25 204-228 553-577 (792)
85 PLN02633 palmitoyl protein thi 96.9 0.0046 1E-07 70.1 10.7 60 166-246 73-133 (314)
86 PRK10162 acetyl esterase; Prov 96.9 0.007 1.5E-07 68.0 11.7 106 84-242 82-193 (318)
87 PF07859 Abhydrolase_3: alpha/ 96.9 0.017 3.7E-07 59.6 13.5 79 148-242 29-108 (211)
88 PF00326 Peptidase_S9: Prolyl 96.8 0.0043 9.2E-08 64.6 8.6 80 147-245 13-100 (213)
89 PRK10252 entF enterobactin syn 96.8 0.0045 9.7E-08 80.5 10.0 102 81-242 1066-1169(1296)
90 KOG2541 Palmitoyl protein thio 96.7 0.0082 1.8E-07 66.9 9.7 74 150-247 55-131 (296)
91 cd00741 Lipase Lipase. Lipase 96.7 0.0051 1.1E-07 61.5 7.5 42 205-246 27-69 (153)
92 PF06342 DUF1057: Alpha/beta h 96.5 0.014 3.1E-07 65.6 10.6 103 81-247 30-140 (297)
93 PF05728 UPF0227: Uncharacteri 96.4 0.0074 1.6E-07 63.9 7.4 20 206-225 59-78 (187)
94 COG3319 Thioesterase domains o 96.4 0.012 2.7E-07 65.3 9.0 102 85-245 2-104 (257)
95 PRK06765 homoserine O-acetyltr 96.2 0.0075 1.6E-07 70.2 6.2 58 166-248 141-200 (389)
96 PF01764 Lipase_3: Lipase (cla 96.0 0.021 4.5E-07 55.5 7.5 52 205-261 63-117 (140)
97 PF05990 DUF900: Alpha/beta hy 96.0 0.054 1.2E-06 59.0 11.4 37 205-241 92-134 (233)
98 COG3243 PhaC Poly(3-hydroxyalk 95.9 0.017 3.7E-07 67.8 7.1 81 147-246 138-219 (445)
99 PLN02517 phosphatidylcholine-s 95.6 0.0083 1.8E-07 73.0 3.5 46 205-250 212-269 (642)
100 TIGR00976 /NonD putative hydro 95.6 0.023 5.1E-07 68.5 7.3 79 147-244 52-132 (550)
101 KOG4391 Predicted alpha/beta h 95.5 0.086 1.9E-06 57.7 10.4 193 82-357 77-283 (300)
102 TIGR01849 PHB_depoly_PhaZ poly 95.5 0.082 1.8E-06 62.4 11.2 125 56-247 82-211 (406)
103 cd00519 Lipase_3 Lipase (class 95.5 0.03 6.5E-07 59.6 6.8 42 205-246 127-169 (229)
104 smart00824 PKS_TE Thioesterase 95.4 0.088 1.9E-06 52.7 9.6 38 206-244 64-102 (212)
105 PF00151 Lipase: Lipase; Inte 95.4 0.057 1.2E-06 61.9 9.0 81 148-241 104-184 (331)
106 PF00756 Esterase: Putative es 95.3 0.16 3.5E-06 54.0 11.8 50 173-241 96-147 (251)
107 KOG3724 Negative regulator of 95.0 0.031 6.6E-07 69.4 5.5 151 644-796 618-768 (973)
108 PF05677 DUF818: Chlamydia CHL 95.0 0.77 1.7E-05 53.4 16.2 84 150-247 173-258 (365)
109 PF08538 DUF1749: Protein of u 94.9 0.14 3.1E-06 58.3 10.1 81 148-241 63-145 (303)
110 PF02230 Abhydrolase_2: Phosph 94.8 0.14 3.1E-06 54.0 9.3 73 150-242 65-138 (216)
111 KOG2029 Uncharacterized conser 94.6 0.027 5.8E-07 68.2 3.6 46 205-250 525-578 (697)
112 PF10503 Esterase_phd: Esteras 94.1 0.33 7.1E-06 53.0 10.3 52 171-241 77-129 (220)
113 PRK10439 enterobactin/ferric e 94.0 0.66 1.4E-05 54.9 13.4 56 170-242 264-321 (411)
114 PLN02408 phospholipase A1 93.6 0.12 2.7E-06 60.1 6.3 59 173-246 182-242 (365)
115 PF01083 Cutinase: Cutinase; 93.5 0.54 1.2E-05 49.4 10.4 46 205-250 80-128 (179)
116 PLN02310 triacylglycerol lipas 93.4 0.12 2.6E-06 60.9 6.1 61 173-246 189-250 (405)
117 PLN00413 triacylglycerol lipas 93.3 0.15 3.4E-06 61.0 6.7 43 205-247 283-330 (479)
118 PF11187 DUF2974: Protein of u 93.3 0.23 4.9E-06 54.3 7.5 42 206-247 84-126 (224)
119 PF01738 DLH: Dienelactone hyd 93.2 0.91 2E-05 47.8 11.7 103 82-241 13-129 (218)
120 PLN02454 triacylglycerol lipas 93.2 0.14 3E-06 60.6 5.9 59 174-247 211-273 (414)
121 COG3208 GrsT Predicted thioest 93.1 0.11 2.5E-06 57.4 4.7 78 148-242 33-110 (244)
122 KOG1838 Alpha/beta hydrolase [ 92.9 0.34 7.4E-06 57.2 8.7 54 174-245 183-236 (409)
123 PLN02753 triacylglycerol lipas 92.8 0.18 4E-06 61.0 6.3 62 173-246 291-360 (531)
124 PLN02571 triacylglycerol lipas 92.8 0.16 3.5E-06 60.0 5.8 59 173-246 208-276 (413)
125 PLN02162 triacylglycerol lipas 92.6 0.32 6.9E-06 58.3 7.9 51 205-261 277-333 (475)
126 PLN02802 triacylglycerol lipas 92.4 0.19 4E-06 60.7 5.7 59 173-246 312-372 (509)
127 KOG4627 Kynurenine formamidase 92.3 0.23 5E-06 54.1 5.7 98 85-241 69-169 (270)
128 PF08840 BAAT_C: BAAT / Acyl-C 92.3 0.23 4.9E-06 53.3 5.7 53 173-245 4-57 (213)
129 PLN03037 lipase class 3 family 92.0 0.24 5.2E-06 59.9 6.1 61 174-247 299-361 (525)
130 COG0400 Predicted esterase [Ge 92.0 1.1 2.4E-05 48.6 10.6 34 204-241 97-131 (207)
131 PLN02761 lipase class 3 family 91.9 0.23 5E-06 60.1 5.7 62 174-246 273-343 (527)
132 KOG2369 Lecithin:cholesterol a 91.8 0.1 2.2E-06 62.2 2.6 67 168-248 158-229 (473)
133 PLN02324 triacylglycerol lipas 91.2 0.38 8.3E-06 57.0 6.5 59 174-247 198-267 (415)
134 PLN02719 triacylglycerol lipas 91.0 0.35 7.6E-06 58.5 6.0 63 173-247 277-347 (518)
135 PLN02934 triacylglycerol lipas 90.5 0.35 7.5E-06 58.5 5.3 53 205-262 320-377 (515)
136 PF06259 Abhydrolase_8: Alpha/ 90.1 2.5 5.5E-05 44.9 10.8 39 205-246 108-146 (177)
137 COG0412 Dienelactone hydrolase 89.4 6.4 0.00014 43.2 13.6 33 204-240 110-142 (236)
138 COG0429 Predicted hydrolase of 89.3 1.9 4.1E-05 50.0 9.7 40 205-246 147-187 (345)
139 PF06821 Ser_hydrolase: Serine 89.1 0.44 9.6E-06 49.8 4.3 38 206-245 55-92 (171)
140 COG4782 Uncharacterized protei 89.1 1.8 3.9E-05 50.7 9.3 37 205-241 190-231 (377)
141 COG0657 Aes Esterase/lipase [L 88.7 2.1 4.6E-05 47.7 9.5 62 148-225 110-171 (312)
142 PF12740 Chlorophyllase2: Chlo 87.5 4.7 0.0001 45.4 11.1 39 203-241 88-128 (259)
143 COG3545 Predicted esterase of 86.7 1.3 2.7E-05 47.4 5.8 41 205-248 58-98 (181)
144 PF06500 DUF1100: Alpha/beta h 86.3 1.1 2.5E-05 53.1 5.8 78 147-244 217-296 (411)
145 KOG2984 Predicted hydrolase [G 85.5 0.95 2.1E-05 49.5 4.3 85 149-263 72-163 (277)
146 COG4947 Uncharacterized protei 85.3 2.5 5.4E-05 45.3 7.1 106 79-241 22-133 (227)
147 KOG4569 Predicted lipase [Lipi 84.8 1.6 3.5E-05 50.3 6.1 55 175-246 157-214 (336)
148 PF12715 Abhydrolase_7: Abhydr 82.4 2.4 5.2E-05 50.1 6.2 35 203-241 223-257 (390)
149 KOG3975 Uncharacterized conser 81.5 12 0.00026 42.4 10.7 35 205-240 109-143 (301)
150 KOG4667 Predicted esterase [Li 80.4 7.8 0.00017 43.1 8.7 70 149-241 63-136 (269)
151 COG2021 MET2 Homoserine acetyl 79.1 2.3 5E-05 49.9 4.6 43 205-250 145-188 (368)
152 cd00312 Esterase_lipase Estera 78.2 5.1 0.00011 47.5 7.2 41 204-245 174-214 (493)
153 PF03403 PAF-AH_p_II: Platelet 78.1 9.7 0.00021 44.8 9.3 33 205-241 227-259 (379)
154 PF12048 DUF3530: Protein of u 78.1 29 0.00062 39.9 12.8 61 166-242 167-227 (310)
155 PF05277 DUF726: Protein of un 77.6 6.5 0.00014 46.0 7.6 41 206-246 220-262 (345)
156 COG3571 Predicted hydrolase of 77.0 3.7 8E-05 43.8 4.9 38 207-247 90-127 (213)
157 PLN02847 triacylglycerol lipas 76.5 4.5 9.8E-05 50.2 6.2 20 205-224 250-269 (633)
158 COG2819 Predicted hydrolase of 75.9 4.8 0.0001 45.5 5.7 33 205-241 136-169 (264)
159 PF05577 Peptidase_S28: Serine 75.6 13 0.00027 43.9 9.4 73 166-265 91-164 (434)
160 PF00135 COesterase: Carboxyle 73.8 11 0.00023 44.6 8.3 57 204-262 206-262 (535)
161 PF06057 VirJ: Bacterial virul 73.0 16 0.00034 39.8 8.5 60 169-245 48-108 (192)
162 PTZ00472 serine carboxypeptida 72.2 9.7 0.00021 45.9 7.5 69 143-225 116-190 (462)
163 PF07224 Chlorophyllase: Chlor 71.4 18 0.00039 41.3 8.8 80 148-240 73-153 (307)
164 COG4188 Predicted dienelactone 67.5 13 0.00028 43.9 6.9 51 167-225 128-178 (365)
165 KOG1515 Arylacetamide deacetyl 67.4 30 0.00066 40.4 9.9 38 204-241 164-204 (336)
166 COG1506 DAP2 Dipeptidyl aminop 66.6 11 0.00024 46.8 6.6 36 203-242 470-505 (620)
167 PF11288 DUF3089: Protein of u 63.7 10 0.00023 41.5 4.9 21 205-225 94-114 (207)
168 KOG3101 Esterase D [General fu 60.4 5.9 0.00013 43.9 2.3 26 203-228 138-164 (283)
169 PF03583 LIP: Secretory lipase 58.0 38 0.00082 38.4 8.3 81 147-241 25-110 (290)
170 PF11144 DUF2920: Protein of u 54.5 24 0.00053 42.2 6.2 72 152-242 144-217 (403)
171 KOG2624 Triglyceride lipase-ch 52.3 13 0.00027 44.5 3.5 49 175-241 147-196 (403)
172 PRK04940 hypothetical protein; 52.3 11 0.00024 40.4 2.8 20 206-225 60-79 (180)
173 PF03959 FSH1: Serine hydrolas 52.0 54 0.0012 35.1 7.9 39 207-245 103-146 (212)
174 KOG1516 Carboxylesterase and r 50.9 16 0.00034 44.2 4.1 65 166-247 171-235 (545)
175 PRK05371 x-prolyl-dipeptidyl a 50.8 52 0.0011 42.5 8.7 92 147-243 278-372 (767)
176 PF05448 AXE1: Acetyl xylan es 49.6 91 0.002 36.1 9.7 33 204-240 173-205 (320)
177 PF02129 Peptidase_S15: X-Pro 48.7 65 0.0014 35.5 8.1 80 147-245 56-137 (272)
178 COG2272 PnbA Carboxylesterase 47.4 37 0.00081 41.6 6.4 40 204-244 178-217 (491)
179 KOG4540 Putative lipase essent 47.0 20 0.00044 41.2 3.9 36 205-246 275-310 (425)
180 COG5153 CVT17 Putative lipase 47.0 20 0.00044 41.2 3.9 36 205-246 275-310 (425)
181 KOG2112 Lysophospholipase [Lip 46.6 54 0.0012 36.2 6.8 72 148-241 54-125 (206)
182 KOG4372 Predicted alpha/beta h 45.8 4.9 0.00011 47.7 -1.1 41 205-246 149-196 (405)
183 COG2382 Fes Enterochelin ester 45.2 38 0.00082 39.2 5.7 114 205-347 176-290 (299)
184 PF08237 PE-PPE: PE-PPE domain 45.2 1E+02 0.0022 34.1 8.8 41 205-246 47-91 (225)
185 PF03096 Ndr: Ndr family; Int 45.1 88 0.0019 36.1 8.5 88 147-264 54-149 (283)
186 COG4099 Predicted peptidase [G 41.3 58 0.0013 38.0 6.3 71 152-241 230-301 (387)
187 PF12146 Hydrolase_4: Putative 38.1 75 0.0016 29.4 5.5 59 85-182 18-78 (79)
188 COG4757 Predicted alpha/beta h 37.7 46 0.001 37.7 4.7 23 205-227 104-126 (281)
189 PF11339 DUF3141: Protein of u 34.9 89 0.0019 38.9 6.8 63 163-245 113-176 (581)
190 COG0627 Predicted esterase [Ge 33.5 23 0.00051 41.0 1.8 22 207-228 153-175 (316)
191 KOG2183 Prolylcarboxypeptidase 33.4 51 0.0011 39.9 4.4 53 205-261 166-224 (492)
192 cd00842 MPP_ASMase acid sphing 30.9 1.6E+02 0.0034 33.0 7.7 49 146-213 167-221 (296)
193 KOG2931 Differentiation-relate 28.9 2.9E+02 0.0062 32.5 9.2 90 148-267 78-176 (326)
194 KOG3253 Predicted alpha/beta h 27.3 76 0.0016 40.1 4.6 69 163-246 220-288 (784)
195 COG0841 AcrB Cation/multidrug 26.3 1.6E+02 0.0035 39.4 7.7 41 711-751 832-874 (1009)
196 KOG1553 Predicted alpha/beta h 23.9 1.1E+02 0.0023 36.6 4.7 41 205-250 310-351 (517)
197 KOG3967 Uncharacterized conser 23.8 1.7E+02 0.0037 33.0 6.0 56 166-243 170-226 (297)
198 cd07395 MPP_CSTP1 Homo sapiens 22.2 2.8E+02 0.0061 30.4 7.5 35 148-182 125-160 (262)
199 PF09752 DUF2048: Uncharacteri 22.0 1.7E+02 0.0037 34.8 6.0 45 205-253 174-218 (348)
200 KOG2281 Dipeptidyl aminopeptid 21.9 1.1E+02 0.0025 38.9 4.8 43 168-228 707-750 (867)
201 PF15383 TMEM237: Transmembran 21.7 28 0.00062 39.3 -0.2 63 1011-1087 94-164 (253)
202 PRK13751 putative mercuric tra 21.3 1.1E+02 0.0023 31.2 3.6 27 1061-1087 46-72 (116)
203 COG2945 Predicted hydrolase of 21.1 2.2E+02 0.0048 31.6 6.2 46 175-241 88-134 (210)
204 PF10340 DUF2424: Protein of u 20.2 1.6E+02 0.0035 35.2 5.4 59 150-225 156-214 (374)
No 1
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-149 Score=1295.26 Aligned_cols=925 Identities=35% Similarity=0.475 Sum_probs=752.4
Q ss_pred HHHHHHHHHHHHHhhcccCCCCeeeeeeccceeecCCCCC--CCCCCCceEEEEeeCCcccchhHhhcccCCccEEEecC
Q 001306 14 VILALWIGIAALYSLLKPISNGCVMTYMYPTYIPISSTEG--ASSSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPG 91 (1104)
Q Consensus 14 ~~~~~~~~l~~l~~~l~~~~n~C~MTYMyPsY~~I~~~~~--~~~a~kY~LYlYrEg~~~~~~~~~~~~l~GvPVLFIPG 91 (1104)
.++++++++..+.+++++++|+|.||||||+|.++-..+. ++.++||+||+||||+.+++ .+..+++|||||||||
T Consensus 20 liia~ll~l~ll~~f~g~~en~CsmtYMypsy~r~i~i~~r~t~~a~kY~LYLY~Egs~~~e--~~~lelsGIPVLFIPG 97 (973)
T KOG3724|consen 20 LIIAVLLGLGLLLHFLGHQENGCSMTYMYPSYYRFIEIPERLTPQADKYSLYLYREGSRWWE--RSTLELSGIPVLFIPG 97 (973)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCceeEEEeccceeecCCcccccCCCCceEEEEecccccccc--cccccCCCceEEEecC
Confidence 3358888888999999999999999999999776655433 56899999999999987654 5667899999999999
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCCCcchhhHHHH
Q 001306 92 NAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMDGQILEEH 171 (1104)
Q Consensus 92 NAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~SAf~G~tL~dQ 171 (1104)
||||||||||+||++++.|++++.++ + + ......++|||+||||||++||||++|+||
T Consensus 98 NAGSyKQvRSiAS~a~n~y~~~~~e~-----t-------------~----~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQ 155 (973)
T KOG3724|consen 98 NAGSYKQVRSIASVAQNAYQGGPFEK-----T-------------E----DRDNPFSFDFFAVDFNEEFTAMHGHILLDQ 155 (973)
T ss_pred CCCchHHHHHHHHHHhhhhcCCchhh-----h-------------h----cccCccccceEEEcccchhhhhccHhHHHH
Confidence 99999999999999999998875432 1 0 122346789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCCCCccc
Q 001306 172 AEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLAL 251 (1104)
Q Consensus 172 AeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~pPvaf 251 (1104)
|||||+||++|+++|++. +|...++|++|+||||||||+|||+++++||+.++.|++|||+||||+.||+++
T Consensus 156 tEYV~dAIk~ILslYr~~--------~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~a~Pl~~ 227 (973)
T KOG3724|consen 156 TEYVNDAIKYILSLYRGE--------REYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHAAPPLPL 227 (973)
T ss_pred HHHHHHHHHHHHHHhhcc--------cccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcccCCCCCC
Confidence 999999999999999841 122357799999999999999999999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHhcccCCCCCCCccccCCCCCcceEEEEecCCCCccccCCCccccCCCCCCcceeeeecccCcee
Q 001306 252 QPSLGNYFARVNDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIESLDGIVPPTHGFMISSTGMKNVW 331 (1104)
Q Consensus 252 D~~l~~fY~~vn~~W~~~~~~~~s~~~~~~~~~~l~~V~LVSIaGG~rD~~VPsdlTsl~~lvP~t~g~tV~TTsIPgVW 331 (1104)
|+.+.+||..+|++|++.+..+ +++.+++|.+|||+||.+|||||++++++++++|.++|++++||+||+||
T Consensus 228 D~~l~~fy~~vnn~W~k~~~~~--------~~~~ls~V~vVSisGG~~Dy~V~se~ssl~~lv~~t~gfsv~sT~iP~vW 299 (973)
T KOG3724|consen 228 DRFLLRFYLLVNNYWNKLQNNN--------SDPLLSHVGVVSISGGIRDYQVPSELSSLRNLVPVTNGFSVFSTNIPVVW 299 (973)
T ss_pred cHHHHHHHHHHHHHHHHHHhcc--------ccchhcceEEEEEecCccccccCcchhhhccccccccceEEEecCCcccc
Confidence 9999999999999999987654 34668899999999999999999999999999999999999999999999
Q ss_pred ecCCCchhhhhHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHHHhccCCCcccccccccccCCCcccccccccccc
Q 001306 332 LSMEHQAILWCNQLVVQVSHTLLSLIDSRTGQPFLDTRQRLAMFSRMLRSGTPQSFNWMMQSHLFHQSTPASIKDAKDAA 411 (1104)
Q Consensus 332 vs~DH~aIVWC~QLv~~IAraLl~lvD~~t~~~t~~~~~Rm~vf~k~l~sgle~~~~~~~~~~~~~~~~~l~~~~~~~~~ 411 (1104)
+++||+||+|||||+++++|.|++++|.+|.|.|++.++|..++.|.+.+|.++ +.++.+..+++.. .+..++.
T Consensus 300 ~~iDHlAIlWCnql~~~vsR~l~s~ida~t~q~~~~~nqRl~vl~r~~i~~~ak-~~~~n~~i~~p~~-il~~~~~---- 373 (973)
T KOG3724|consen 300 LSIDHLAILWCNQLVRVVSRVLLSYIDALTTQTTRQLNQRLYVLDRDLISGRAK-FRHMNPVISKPIK-ILASEDL---- 373 (973)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhccCccccchhHHHHHHHHHHHHhhHHH-hcCCCcccccHHH-hhhhcCC----
Confidence 999999999999999999999999999999999999999999999999999998 6677655555442 2221111
Q ss_pred cCCCCCCCcccccccccCCCccccccceeEEeeccCCccceEeeeccCCCCceEEEEEeccCCCCcceEeecCCCCCCCC
Q 001306 412 GSQAPSSSSCTVQWSAEGLDKDLYIQTATVTVLAMDGKRRWLDIQKLGANGKDHFIFVTNLAPCTGVRIHLWPEKGKSTT 491 (1104)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~l~i~~~~~~~~~~f~l~t~l~~~~~~~v~l~~~~~~~~~ 491 (1104)
.|...|...-.+...+.+ ++++.+...++++.....+.+++.++.|.+++.+|++.+++.|.|+.+..+
T Consensus 374 --------~~f~~~~~~~~~~~~~~q---~~vl~~~~~~~~l~~~~s~~~~~ehl~fq~~~~~~s~~~I~~c~ek~k~~s 442 (973)
T KOG3724|consen 374 --------TGFSVWETQFALLILYKQ---FEVLEKRHNAFPLNNMTSVIYDEEHLYFQNSLDSASNTWIYACLEKEKEVS 442 (973)
T ss_pred --------CceEehhhhhHHHHHHHH---HHHHHHhhhccccccccccccccceEEEeccccccccceeeeeccccchhh
Confidence 133335332223333333 456667778888877777777888988988999999999999998766555
Q ss_pred CCCCcccceeccccceecCCCCCCCCCCCCCCCCCCCCeeEEEeCccccCCccEEEEEeCCCCCCCCCCCCcceeeeeec
Q 001306 492 DLPGSKRILEVTSKMVHIPSRAAPRQLEPGSQTEQAPPSAVFQLGPEDMRGFRFLTISVAPTPTISGRPPPAVSMAVGQF 571 (1104)
Q Consensus 492 ~~~~~~~~~~~t~~~~~iP~s~~~~~~~p~s~~~~~~pf~~L~~~~~dL~~~~fi~I~~aprp~~~~~~~~~~~~~v~~f 571 (1104)
...+|+..-+++..+...+...++++.+|.++...+.|.....+...|+..+++.... +|+.+.++.++-...+.+.++
T Consensus 443 ~l~~vd~~~~v~~~~s~~~~~~~~~~~~~~s~~~~avp~~~~~l~~~d~~~~r~~~~~-~~se~~~~~p~~~~~~~~l~~ 521 (973)
T KOG3724|consen 443 CLLAVDAPLSVDIQMSPPMLVQALRFYEPASSHLHAVPSGMISLSVYDAILFRKTTYY-APSETASLLPNLGFLFFVLSN 521 (973)
T ss_pred hhHhhhcccccccccccchhhhhhhhccccccceecCCcccceeeeeeeeeeeccccc-cchhhhccCCceeEEEEEeec
Confidence 6667888888888888888888888888999889999999999999999999999988 888888877777766777776
Q ss_pred cCCcccccccChhHHHhhccCCcceeccCCCCeEEEEEEecccCcceeEEEEEe--ecccccCCCCcccccCchhhhhcc
Q 001306 572 FNPQEGEREFSSQSMLLSAYSPKDLFLKEDHPLVFNLTFAISLGLLPITLSLRT--ASCGIQNSGFANEEAGDIEHSRLC 649 (1104)
Q Consensus 572 ~~~~~~~~~~s~~~ll~~~~~~~~~~L~~~~pl~~~i~~p~s~SLl~y~ls~~~--~~c~~~~~~f~r~~~~~~e~~~~~ 649 (1104)
.++-+.....+..-.++...+.+++..+++++.+.++++-.. |+++|+.+.+. ..|+++. +
T Consensus 522 ~s~~~~t~~~~sql~Lf~~g~~~qi~~k~di~k~~~~~~~~t-Sllal~i~~s~e~s~~~i~a-----------~----- 584 (973)
T KOG3724|consen 522 VSDVDDTTTLPSQLELFMAGGWRQIFFKVDISKVSRFSFVKT-SLLALRIDKSYEGSYLGISA-----------I----- 584 (973)
T ss_pred cccccCccccHhHHHHHHccchhhhheeccHhHheecccchh-heeEeecceeeccccccccc-----------c-----
Confidence 565555555555555555556678888889888877777665 79999988874 4555421 1
Q ss_pred ccccCCceeeeecCC---CceEEccCCCcccccccCCCccccCCCC-CceEEEEEeeCCCCce--eEEEEEeHHHHHHHH
Q 001306 650 KMRCFPPVALAWDPT---SGLYVFPNLFSETIIIDSSPALWSYSQG-SEKTIVVLLVDPHCSY--KTSVSVSVTAAASRF 723 (1104)
Q Consensus 650 ~~~~F~P~~~qW~~~---s~~~i~pNv~~~~~i~~~aP~~~~~~~~-~~~l~l~l~~DP~C~~--~isl~is~~~sl~rL 723 (1104)
. |+.+ .|||+ |+.. ...|. +|+.+.+... ..++++.+...|..+. .+.+...|..+++++
T Consensus 585 -----~-----~i~~~~e~k~hl--~i~~-k~~hv-~Pf~~l~~~e~~~s~~lk~~~~P~~s~~~~~~iql~~~~~ly~l 650 (973)
T KOG3724|consen 585 -----E-----LIMAEFEGKIHL--IILL-KYLHV-APFAVLNISETLISLTLKLFGFPWFSLDVLIVIQLQYQPALYAL 650 (973)
T ss_pred -----c-----cccCCcccceee--eeec-ccccc-cchhhhcccccceeeeEEEeeCchHhhhHHhhhchhhhHhhhhh
Confidence 1 3333 78887 6653 22333 5888776554 4569999999998777 566666699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHhhcCChhHHHHHHHHHHHHHHHHhhcc-------CCCC
Q 001306 724 LLLYGSQIAGLSVAVVFFALMRQAYAWDYYLPMPSMLTVVEYNLQMPFPFLLLAILPILVSLFHSFLMS-------QPFP 796 (1104)
Q Consensus 724 ~lrYr~~i~afpvaVi~lvL~~Qf~~y~~t~~FpSF~~aL~~~Lr~~lp~lll~~~~l~~~~~~~~~~~-------~~~p 796 (1104)
.+|||+..|.||+..+.+++..||++++.+..++|+++|++..+|+.+..+++-+.+.+- ...+-++. +|.|
T Consensus 651 ~iryr~~lAsfpv~~i~l~~~~qf~~ph~~y~~~s~~sal~~~~rk~li~~~f~v~~ss~-vv~~~l~~q~~~~v~dpvp 729 (973)
T KOG3724|consen 651 GIRYRGLLASFPVRQITLRLLVQFLVPHFLYLITSPLSALSGFTRKILITARFVVFPSSK-VVTPPLPEQERVQVEDPVP 729 (973)
T ss_pred hheeehhhhhcchhHHHHHHHHhhhhhccceeecchHHHHHHHHHHHHHHHHHHhhhhhh-hhchhhHHHHHHhhcCCcc
Confidence 999999999999999999999999999999999999999999999877777666655552 22222222 4555
Q ss_pred CccccceehhhHHHhhhhHHHHHHHHHhhhhhhhhheeeeeehhhhhhccCchh-----hHHHHHHhhcccchh------
Q 001306 797 PIMSFAVVSLICYVLANGLIALLILVSQLVFYVTATAHVFIKTRWEVWEGNFCF-----AFLLWFVNLSSSFFS------ 865 (1104)
Q Consensus 797 ~~~~~~~v~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~------ 865 (1104)
+.-.+.. |+.|... +.+-||.++=-+++-
T Consensus 730 ~~~p~~~----------------------------------------~~~nmh~~f~ll~v~~wf~s~~~~l~~v~~v~L 769 (973)
T KOG3724|consen 730 IQLPNNR----------------------------------------QRYNMHNRFRLLAVLPWFSSLFYSLLMVQPVPL 769 (973)
T ss_pred cccchhH----------------------------------------HhhcccchhhHHHHHHHHHHHHHHHHhhchhHH
Confidence 4322110 1222111 112233322211111
Q ss_pred hhhHHHhhccchhhhhhhhhhhhhhhccchhHHHHHhhhhccccccchhhhhhhhhccccCCCCCcccccccccccCCCC
Q 001306 866 LKVVRVIRANQLLVAALAAITLVCFVHPALGLIVILLSHAFCCHTSLSSHAWRKELYDYNTNNNGRSKLRYTRERRFSPN 945 (1104)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1104)
+-.+-++|-|-.|.+.+.|-.|+.+|||++|+|+++-+||.|.------.-.+||..|+.++..++. ++
T Consensus 770 laf~~~I~~s~~iL~t~~~rkL~~~~~~~l~~F~~~~~~ay~~r~~~~mllll~~~~~~p~q~~~~~-----------~l 838 (973)
T KOG3724|consen 770 LAFTVAIRISTTILMTLIARKLVSFVHPALGLFVLLASHAYCSRCCIMMLLLLKESLDQPNQAERKT-----------RL 838 (973)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhhh-----------cc
Confidence 1122345668888889999999999999999999999999991111133456789999888777665 56
Q ss_pred CCCCCCCCCCCCCCcccccccchhhcchhhHHHHHHHHHHhhhhHHHHHHHHhcCCCCChhhhhhhhhHHhhhhhcccCC
Q 001306 946 LPLDDCSSSSPDSSKTFSDTQLEIFHHRHGLLILHLLASLMFVPSLMAWFQRISMGHSFPWFLDSVLCIGVILHGTVISK 1025 (1104)
Q Consensus 946 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~lh~~~~~m~~ps~~aw~q~~~~~~~~p~~~d~~~~~g~~~hg~~~s~ 1025 (1104)
....+...+.+..+|||++ |+++|+||||||||||+||+||+|++++|+||||||++||||-|+.+|+||++|||.
T Consensus 839 ~~q~~t~v~~~ll~~s~~e-~~d~~N~~~tlliL~Ll~a~~~~P~livw~~ni~~~ws~pf~~hhn~~~~vpfi~l~--- 914 (973)
T KOG3724|consen 839 PSQRETPVSGDLLEKSFVE-QADIFNHRHTLLILHLLAALMFVPSLIVWFQNIGTGWSFPFFAHHNLCVGVPFIGLL--- 914 (973)
T ss_pred ccccccccHHHHHHHHHHH-HHHHhccchHHHHHHHHHHHhhhHHHHHHHHhcccCcccccccccceeEechhheeh---
Confidence 6667788888999999999 999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccCCccccccchhhhhhhhhHHHHhhccccchhHHHHHHHHhhhhhhhhhHH
Q 001306 1026 PEYNYLVSFPGILGQELRLNSIYLLAGYYSFLSGLALAPYRVFYAMAAIGVISLASKII 1084 (1104)
Q Consensus 1026 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~y~~~~~g~~~~~~~~~ 1084 (1104)
|+.....||| ..|+|++..+||+++||||++.+.++|||+.+||.|.+|++.+.++++
T Consensus 915 ~i~~~~~s~P-l~~~~~~~~~i~l~~l~~~sfiyg~~~pY~ih~~v~~~~~wlLfl~~~ 972 (973)
T KOG3724|consen 915 PISSILRSFP-LSGHQIRPHHIYLLALYYCSFIYGELAPYKIHYAVASLGYWLLFLKIS 972 (973)
T ss_pred hhhhcccccc-cCCcccceeEEehHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHheeec
Confidence 8888899999 999999999999999999999999999999999999999999998875
No 2
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=100.00 E-value=2.9e-55 Score=464.14 Aligned_cols=225 Identities=48% Similarity=0.833 Sum_probs=203.6
Q ss_pred ccCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC
Q 001306 80 QLNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE 159 (1104)
Q Consensus 80 ~l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE 159 (1104)
+++|+||||||||+|||+|+||+|+++.+... .+....++|+|++||+||
T Consensus 1 ~~~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~------------------------------~~~~~~~~d~ft~df~~~ 50 (225)
T PF07819_consen 1 KLSGIPVLFIHGNAGSYKQVRSLASELQRKAL------------------------------LNDNSSHFDFFTVDFNEE 50 (225)
T ss_pred CCCCCEEEEECcCCCCHhHHHHHHHHHhhhhh------------------------------hccCccceeEEEeccCcc
Confidence 47899999999999999999999999854320 122345699999999999
Q ss_pred CCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEE
Q 001306 160 HSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (1104)
Q Consensus 160 ~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IIT 239 (1104)
.++++|.+|.+|++|++++|++|+++|+. ...++++|+||||||||+|||.++.++++.++.|++|||
T Consensus 51 ~s~~~g~~l~~q~~~~~~~i~~i~~~~~~------------~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iit 118 (225)
T PF07819_consen 51 LSAFHGRTLQRQAEFLAEAIKYILELYKS------------NRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIIT 118 (225)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHhhhh------------ccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEE
Confidence 99999999999999999999999999942 134578999999999999999999988887889999999
Q ss_pred ecCCCCCCCcccCcchHHHHHHHHHHHHhcccCCCCCCCccccCCCCCcceEEEEecCCCCccccCCCccccCCCCCCcc
Q 001306 240 LSSPHQSPPLALQPSLGNYFARVNDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIESLDGIVPPTHG 319 (1104)
Q Consensus 240 LsTPH~~pPvafD~~l~~fY~~vn~~W~~~~~~~~s~~~~~~~~~~l~~V~LVSIaGG~rD~~VPsdlTsl~~lvP~t~g 319 (1104)
|+|||.+||+++|+.+.++|+.++++|++.+.. ...+++|.+|||+||.+|++||+++|.++.++|++++
T Consensus 119 l~tPh~g~~~~~d~~~~~~y~~~~~~~~~~~~~----------~~~~~~v~~vSi~gG~~D~~v~~~~t~~~~~~~~~~~ 188 (225)
T PF07819_consen 119 LGTPHRGSPLAFDRSLDRFYKRLNNFWRKNYSP----------ADSLRDVTVVSIAGGIRDTLVPSDLTSLDGLVPPTNG 188 (225)
T ss_pred EcCCCCCccccchHHHHHHHHHHHHHHHHhccc----------ccccCCceEEEecCCcccccccccccccccccCcccc
Confidence 999999999999999999999999999986543 1236799999999999999999999999999999999
Q ss_pred eeeeecccCceeecCCCchhhhhHHHHHHHHHHHHhh
Q 001306 320 FMISSTGMKNVWLSMEHQAILWCNQLVVQVSHTLLSL 356 (1104)
Q Consensus 320 ~tV~TTsIPgVWvs~DH~aIVWC~QLv~~IAraLl~l 356 (1104)
++++||+||+||+++||+|||||+||+.+|||+|+++
T Consensus 189 ~~~~tt~ip~v~~~~dH~~ivWC~ql~~~i~~~l~~~ 225 (225)
T PF07819_consen 189 LSVSTTSIPGVWTSTDHQAIVWCNQLVLVIARALFDM 225 (225)
T ss_pred ceeccccCCccccCCCCCEEEEehhHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999985
No 3
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.06 E-value=1.5e-09 Score=118.65 Aligned_cols=225 Identities=16% Similarity=0.169 Sum_probs=125.8
Q ss_pred ccCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCcccccc-ccccccccccceeEEEEeCCC
Q 001306 80 QLNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDAS-IFHSSNQYTRRLDWFAVDLEG 158 (1104)
Q Consensus 80 ~l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~-~~~~~~~~~~~lD~FaVDFnE 158 (1104)
.-..+|.|||||-.|++.--+.+...+.+..... +..++ -.-..+.... +-.++... .--++-|-|..
T Consensus 8 ~~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~--------~~~l~-v~V~~~G~v~~~G~~~~~~--~nPiIqV~F~~ 76 (255)
T PF06028_consen 8 NQSTTPTIFIHGYGGTANSFNHMINRLENKQGVA--------QKVLT-VTVSKNGKVKVSGKLSKNA--KNPIIQVNFED 76 (255)
T ss_dssp --S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS---------S-EEE-EEEETTSEEEEES---TT---SS-EEEEEESS
T ss_pred ccCCCcEEEECCCCCChhHHHHHHHHHHhhcCCC--------ceEEE-EEECCCCeEEEeeecCCCC--CCCEEEEEecC
Confidence 3578999999999999988888888765222111 00000 0000000000 00111111 12345555554
Q ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCccc--ccccE
Q 001306 159 EHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRK--SAVET 236 (1104)
Q Consensus 159 E~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~--~~V~~ 236 (1104)
... ....+||+++..+++++...|+ .+.+.+|||||||+++..++....-+. ..++.
T Consensus 77 n~~----~~~~~qa~wl~~vl~~L~~~Y~-----------------~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K 135 (255)
T PF06028_consen 77 NRN----ANYKKQAKWLKKVLKYLKKKYH-----------------FKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNK 135 (255)
T ss_dssp TT-----CHHHHHHHHHHHHHHHHHHCC-------------------SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEE
T ss_pred CCc----CCHHHHHHHHHHHHHHHHHhcC-----------------CCEEeEEEECccHHHHHHHHHHhccCCCCcccce
Confidence 332 4688999999999999988886 679999999999999998775321111 25899
Q ss_pred EEEecCCCCCCCcccC------------cchHHHHHHHHHHHHhcccCCCCCCCccccCCCCCcceEEEEecC-----CC
Q 001306 237 VLTLSSPHQSPPLALQ------------PSLGNYFARVNDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAG-----YH 299 (1104)
Q Consensus 237 IITLsTPH~~pPvafD------------~~l~~fY~~vn~~W~~~~~~~~s~~~~~~~~~~l~~V~LVSIaGG-----~r 299 (1104)
+|++++|..+....-+ ..+...|+.+-+.-++.+ -.++.+++|+|- ..
T Consensus 136 ~V~Ia~pfng~~~~~~~~~~~~~~~~gp~~~~~~y~~l~~~~~~~~---------------p~~i~VLnI~G~~~~g~~s 200 (255)
T PF06028_consen 136 LVTIAGPFNGILGMNDDQNQNDLNKNGPKSMTPMYQDLLKNRRKNF---------------PKNIQVLNIYGDLEDGSNS 200 (255)
T ss_dssp EEEES--TTTTTCCSC-TTTT-CSTT-BSS--HHHHHHHHTHGGGS---------------TTT-EEEEEEEESBTTCSB
T ss_pred EEEeccccCccccccccchhhhhcccCCcccCHHHHHHHHHHHhhC---------------CCCeEEEEEecccCCCCCC
Confidence 9999999998532221 234555555532211111 127889999995 36
Q ss_pred CccccCCCc-cccCCCCCCcceeeeecccCceeecCCCchhhhhHHHHHHHHHHHH
Q 001306 300 DYQVRSKIE-SLDGIVPPTHGFMISSTGMKNVWLSMEHQAILWCNQLVVQVSHTLL 354 (1104)
Q Consensus 300 D~~VPsdlT-sl~~lvP~t~g~tV~TTsIPgVWvs~DH~aIVWC~QLv~~IAraLl 354 (1104)
|..||-..+ ++..++... ....-+-.++| -.+.|..+-=..|+.+.|+++|.
T Consensus 201 DG~V~~~Ss~sl~~L~~~~-~~~Y~e~~v~G--~~a~HS~LheN~~V~~~I~~FLw 253 (255)
T PF06028_consen 201 DGIVPNASSLSLRYLLKNR-AKSYQEKTVTG--KDAQHSQLHENPQVDKLIIQFLW 253 (255)
T ss_dssp TSSSBHHHHCTHHHHCTTT-SSEEEEEEEES--GGGSCCGGGCCHHHHHHHHHHHC
T ss_pred CeEEeHHHHHHHHHHhhcc-cCceEEEEEEC--CCCccccCCCCHHHHHHHHHHhc
Confidence 777776554 344444321 11222222333 35789999888999999999885
No 4
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.05 E-value=2.1e-09 Score=115.87 Aligned_cols=99 Identities=20% Similarity=0.263 Sum_probs=77.4
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
+|-|||||||..+|.++||.++..+++. ++++++|+.| +.
T Consensus 28 ~~~~vlllHG~~~~~~~w~~~~~~L~~~---------------------------------------~~vi~~DlpG~G~ 68 (294)
T PLN02824 28 SGPALVLVHGFGGNADHWRKNTPVLAKS---------------------------------------HRVYAIDLLGYGY 68 (294)
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHhC---------------------------------------CeEEEEcCCCCCC
Confidence 3679999999999999999998865432 3789999998 33
Q ss_pred CCc---------chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcc
Q 001306 161 SAM---------DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLR 230 (1104)
Q Consensus 161 SAf---------~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~ 230 (1104)
|.- +..+++++++.+.+.|+.+ . .++++||||||||.||..++. +|
T Consensus 69 S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l----~-----------------~~~~~lvGhS~Gg~va~~~a~~~p--- 124 (294)
T PLN02824 69 SDKPNPRSAPPNSFYTFETWGEQLNDFCSDV----V-----------------GDPAFVICNSVGGVVGLQAAVDAP--- 124 (294)
T ss_pred CCCCccccccccccCCHHHHHHHHHHHHHHh----c-----------------CCCeEEEEeCHHHHHHHHHHHhCh---
Confidence 331 2357899898888888754 1 357999999999999998775 44
Q ss_pred cccccEEEEecCCC
Q 001306 231 KSAVETVLTLSSPH 244 (1104)
Q Consensus 231 ~~~V~~IITLsTPH 244 (1104)
+.|+++|+++++.
T Consensus 125 -~~v~~lili~~~~ 137 (294)
T PLN02824 125 -ELVRGVMLINISL 137 (294)
T ss_pred -hheeEEEEECCCc
Confidence 5699999998764
No 5
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.97 E-value=3.8e-09 Score=114.02 Aligned_cols=99 Identities=22% Similarity=0.257 Sum_probs=77.3
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
+|-|||||||..+|..+||.++..+++. ++++++|+.+ +.
T Consensus 26 ~g~~vvllHG~~~~~~~w~~~~~~L~~~---------------------------------------~~via~D~~G~G~ 66 (295)
T PRK03592 26 EGDPIVFLHGNPTSSYLWRNIIPHLAGL---------------------------------------GRCLAPDLIGMGA 66 (295)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhC---------------------------------------CEEEEEcCCCCCC
Confidence 5679999999999999999988865321 2789999998 44
Q ss_pred CCc--chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEE
Q 001306 161 SAM--DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (1104)
Q Consensus 161 SAf--~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~II 238 (1104)
|.. .+.++.++|+.+.+.++.+ . .+++++|||||||.||..++.. + ++.|+++|
T Consensus 67 S~~~~~~~~~~~~a~dl~~ll~~l----~-----------------~~~~~lvGhS~Gg~ia~~~a~~--~-p~~v~~li 122 (295)
T PRK03592 67 SDKPDIDYTFADHARYLDAWFDAL----G-----------------LDDVVLVGHDWGSALGFDWAAR--H-PDRVRGIA 122 (295)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHh----C-----------------CCCeEEEEECHHHHHHHHHHHh--C-hhheeEEE
Confidence 432 2357888888887777764 1 3589999999999999997752 2 46799999
Q ss_pred EecCC
Q 001306 239 TLSSP 243 (1104)
Q Consensus 239 TLsTP 243 (1104)
+++++
T Consensus 123 l~~~~ 127 (295)
T PRK03592 123 FMEAI 127 (295)
T ss_pred EECCC
Confidence 99974
No 6
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=98.94 E-value=6.1e-09 Score=107.99 Aligned_cols=99 Identities=16% Similarity=0.111 Sum_probs=71.3
Q ss_pred CccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCC
Q 001306 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHS 161 (1104)
Q Consensus 83 GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~S 161 (1104)
|-|||||||..||..+|+.++..+. +++++++|+.+ +.|
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~----------------------------------------~~~vi~~D~~G~G~S 41 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP----------------------------------------DYPRLYIDLPGHGGS 41 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC----------------------------------------CCCEEEecCCCCCCC
Confidence 3469999999999999998877421 25889999998 333
Q ss_pred Ccc-hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEe
Q 001306 162 AMD-GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (1104)
Q Consensus 162 Af~-G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITL 240 (1104)
.-. +.++.++++.+.+.|+.. . .+++++|||||||.+|..++.. +.+..|+++|++
T Consensus 42 ~~~~~~~~~~~~~~l~~~l~~~----~-----------------~~~~~lvG~S~Gg~va~~~a~~--~~~~~v~~lvl~ 98 (242)
T PRK11126 42 AAISVDGFADVSRLLSQTLQSY----N-----------------ILPYWLVGYSLGGRIAMYYACQ--GLAGGLCGLIVE 98 (242)
T ss_pred CCccccCHHHHHHHHHHHHHHc----C-----------------CCCeEEEEECHHHHHHHHHHHh--CCcccccEEEEe
Confidence 321 236667666666555532 1 4689999999999999997752 223459999988
Q ss_pred cCCC
Q 001306 241 SSPH 244 (1104)
Q Consensus 241 sTPH 244 (1104)
+++.
T Consensus 99 ~~~~ 102 (242)
T PRK11126 99 GGNP 102 (242)
T ss_pred CCCC
Confidence 7653
No 7
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.92 E-value=6.7e-09 Score=111.27 Aligned_cols=99 Identities=17% Similarity=0.198 Sum_probs=76.3
Q ss_pred ccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCC
Q 001306 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSA 162 (1104)
Q Consensus 84 vPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SA 162 (1104)
.|||||||..|+...|+.++..+.+ +++++++|+.+ +.|.
T Consensus 26 ~plvllHG~~~~~~~w~~~~~~L~~---------------------------------------~~~vi~~Dl~G~G~S~ 66 (276)
T TIGR02240 26 TPLLIFNGIGANLELVFPFIEALDP---------------------------------------DLEVIAFDVPGVGGSS 66 (276)
T ss_pred CcEEEEeCCCcchHHHHHHHHHhcc---------------------------------------CceEEEECCCCCCCCC
Confidence 6999999999999988877764321 35899999998 3332
Q ss_pred c--chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEe
Q 001306 163 M--DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (1104)
Q Consensus 163 f--~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITL 240 (1104)
- .+.+++++++.+.+.|+.+ . .++++||||||||.||..++.. .++.|+++|++
T Consensus 67 ~~~~~~~~~~~~~~~~~~i~~l----~-----------------~~~~~LvG~S~GG~va~~~a~~---~p~~v~~lvl~ 122 (276)
T TIGR02240 67 TPRHPYRFPGLAKLAARMLDYL----D-----------------YGQVNAIGVSWGGALAQQFAHD---YPERCKKLILA 122 (276)
T ss_pred CCCCcCcHHHHHHHHHHHHHHh----C-----------------cCceEEEEECHHHHHHHHHHHH---CHHHhhheEEe
Confidence 1 1346888888888777764 1 3579999999999999997752 14679999999
Q ss_pred cCCCC
Q 001306 241 SSPHQ 245 (1104)
Q Consensus 241 sTPH~ 245 (1104)
+++..
T Consensus 123 ~~~~~ 127 (276)
T TIGR02240 123 ATAAG 127 (276)
T ss_pred ccCCc
Confidence 98875
No 8
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.90 E-value=1.7e-08 Score=109.74 Aligned_cols=130 Identities=17% Similarity=0.220 Sum_probs=89.6
Q ss_pred eeeeeeccceeecCCCCCCCCCCCceEEEEeeCCcccchhHhhcccCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCC
Q 001306 36 CVMTYMYPTYIPISSTEGASSSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPL 115 (1104)
Q Consensus 36 C~MTYMyPsY~~I~~~~~~~~a~kY~LYlYrEg~~~~~~~~~~~~l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~ 115 (1104)
|--.-+.+.|++++..+. .++.++ |.|.. ..+|-|||||||..++..+|+.++..+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~----~~~~i~-y~~~G----------~~~~~~lvliHG~~~~~~~w~~~~~~L~~------- 71 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDG----GPLRMH-YVDEG----------PADGPPVLLLHGEPSWSYLYRKMIPILAA------- 71 (302)
T ss_pred CcCCCCCceeEeecCCCC----ceEEEE-EEecC----------CCCCCEEEEECCCCCchhhHHHHHHHHHh-------
Confidence 433344667777664332 346666 44421 12466999999999999999998886532
Q ss_pred cchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCCcc----hhhHHHHHHHHHHHHHHHHHHcccch
Q 001306 116 EHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSAMD----GQILEEHAEYVVYAIHRILDQYRESQ 190 (1104)
Q Consensus 116 ~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SAf~----G~tL~dQAeyVn~aI~~ILslY~~~~ 190 (1104)
.+++++++|+.+ +.|.-. ..+++++++.+.+.++.+ .
T Consensus 72 -------------------------------~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~--- 113 (302)
T PRK00870 72 -------------------------------AGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----D--- 113 (302)
T ss_pred -------------------------------CCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----C---
Confidence 146899999998 444321 136777777776666543 1
Q ss_pred hhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecC
Q 001306 191 DAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 191 ~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsT 242 (1104)
.++++||||||||.+|..++.. + ++.|+++|.+++
T Consensus 114 --------------~~~v~lvGhS~Gg~ia~~~a~~--~-p~~v~~lvl~~~ 148 (302)
T PRK00870 114 --------------LTDVTLVCQDWGGLIGLRLAAE--H-PDRFARLVVANT 148 (302)
T ss_pred --------------CCCEEEEEEChHHHHHHHHHHh--C-hhheeEEEEeCC
Confidence 3579999999999999997752 2 457999999985
No 9
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.89 E-value=7.6e-09 Score=102.04 Aligned_cols=97 Identities=32% Similarity=0.405 Sum_probs=74.0
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCCc-
Q 001306 86 VLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSAM- 163 (1104)
Q Consensus 86 VLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SAf- 163 (1104)
||||||..|+...++.++..++ .+++++++|+.+ +.|.-
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~---------------------------------------~~~~v~~~d~~G~G~s~~~ 41 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA---------------------------------------RGYRVIAFDLPGHGRSDPP 41 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH---------------------------------------TTSEEEEEECTTSTTSSSH
T ss_pred eEEECCCCCCHHHHHHHHHHHh---------------------------------------CCCEEEEEecCCccccccc
Confidence 7999999999999999887542 145899999998 33332
Q ss_pred ---chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEe
Q 001306 164 ---DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (1104)
Q Consensus 164 ---~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITL 240 (1104)
...+++++++.+.+.++.+ . .+++++|||||||.+|..++.. .++.|+++|++
T Consensus 42 ~~~~~~~~~~~~~~l~~~l~~~----~-----------------~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~~vl~ 97 (228)
T PF12697_consen 42 PDYSPYSIEDYAEDLAELLDAL----G-----------------IKKVILVGHSMGGMIALRLAAR---YPDRVKGLVLL 97 (228)
T ss_dssp SSGSGGSHHHHHHHHHHHHHHT----T-----------------TSSEEEEEETHHHHHHHHHHHH---SGGGEEEEEEE
T ss_pred cccCCcchhhhhhhhhhccccc----c-----------------cccccccccccccccccccccc---cccccccceee
Confidence 3467888888877777654 1 2589999999999999998852 14579999999
Q ss_pred cCCCC
Q 001306 241 SSPHQ 245 (1104)
Q Consensus 241 sTPH~ 245 (1104)
+++..
T Consensus 98 ~~~~~ 102 (228)
T PF12697_consen 98 SPPPP 102 (228)
T ss_dssp SESSS
T ss_pred ccccc
Confidence 97764
No 10
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.89 E-value=1.1e-08 Score=106.66 Aligned_cols=99 Identities=18% Similarity=0.272 Sum_probs=73.3
Q ss_pred cCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-
Q 001306 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE- 159 (1104)
Q Consensus 81 l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE- 159 (1104)
.++-|||||||..|++..++.++..+.+ +++++++|+.+-
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~---------------------------------------~~~vi~~D~~G~G 54 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVN---------------------------------------DHDIIQVDMRNHG 54 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhh---------------------------------------CCeEEEECCCCCC
Confidence 4678999999999999998888775422 358899999872
Q ss_pred CCC-cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEE
Q 001306 160 HSA-MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (1104)
Q Consensus 160 ~SA-f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~II 238 (1104)
.|. ..+.++.++++-+.+.|+.+ . .++++||||||||.+|..++.. .++.|+++|
T Consensus 55 ~s~~~~~~~~~~~~~d~~~~l~~l----~-----------------~~~~~lvGhS~Gg~va~~~a~~---~~~~v~~lv 110 (255)
T PRK10673 55 LSPRDPVMNYPAMAQDLLDTLDAL----Q-----------------IEKATFIGHSMGGKAVMALTAL---APDRIDKLV 110 (255)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHc----C-----------------CCceEEEEECHHHHHHHHHHHh---CHhhcceEE
Confidence 222 23356777777666666543 1 3579999999999999998753 245799999
Q ss_pred EecC
Q 001306 239 TLSS 242 (1104)
Q Consensus 239 TLsT 242 (1104)
++++
T Consensus 111 li~~ 114 (255)
T PRK10673 111 AIDI 114 (255)
T ss_pred EEec
Confidence 9974
No 11
>PRK10349 carboxylesterase BioH; Provisional
Probab=98.83 E-value=1.1e-08 Score=107.74 Aligned_cols=95 Identities=26% Similarity=0.369 Sum_probs=67.2
Q ss_pred CCc-cEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-C
Q 001306 82 NGV-PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-E 159 (1104)
Q Consensus 82 ~Gv-PVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E 159 (1104)
+|- |||||||..|+.+.|+.++..+.+ +++++++|+.+ +
T Consensus 11 ~g~~~ivllHG~~~~~~~w~~~~~~L~~---------------------------------------~~~vi~~Dl~G~G 51 (256)
T PRK10349 11 QGNVHLVLLHGWGLNAEVWRCIDEELSS---------------------------------------HFTLHLVDLPGFG 51 (256)
T ss_pred CCCCeEEEECCCCCChhHHHHHHHHHhc---------------------------------------CCEEEEecCCCCC
Confidence 454 699999999999999988876432 35889999998 3
Q ss_pred CCCcc-hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEE
Q 001306 160 HSAMD-GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (1104)
Q Consensus 160 ~SAf~-G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~II 238 (1104)
.|... ..++.+.++.+ ++ + . .+++++|||||||.+|..++.. .++.|+++|
T Consensus 52 ~S~~~~~~~~~~~~~~l---~~----~-~-----------------~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~li 103 (256)
T PRK10349 52 RSRGFGALSLADMAEAV---LQ----Q-A-----------------PDKAIWLGWSLGGLVASQIALT---HPERVQALV 103 (256)
T ss_pred CCCCCCCCCHHHHHHHH---Hh----c-C-----------------CCCeEEEEECHHHHHHHHHHHh---ChHhhheEE
Confidence 34322 23454443332 21 1 1 4689999999999999997752 256799999
Q ss_pred EecCC
Q 001306 239 TLSSP 243 (1104)
Q Consensus 239 TLsTP 243 (1104)
+++++
T Consensus 104 li~~~ 108 (256)
T PRK10349 104 TVASS 108 (256)
T ss_pred EecCc
Confidence 99864
No 12
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.82 E-value=1.9e-08 Score=113.53 Aligned_cols=101 Identities=24% Similarity=0.332 Sum_probs=75.7
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
.|.|||||||..++...|+.++..+.+ ++.++++|+.+ +.
T Consensus 87 ~gp~lvllHG~~~~~~~w~~~~~~L~~---------------------------------------~~~via~Dl~G~G~ 127 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHWRRNIGVLAK---------------------------------------NYTVYAIDLLGFGA 127 (360)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc---------------------------------------CCEEEEECCCCCCC
Confidence 568999999999999999988775321 35899999998 33
Q ss_pred CCc---chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEE
Q 001306 161 SAM---DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (1104)
Q Consensus 161 SAf---~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~I 237 (1104)
|.- .+.+++++++.+.+.++.+ . .++++||||||||.||..++.. +.+++|+++
T Consensus 128 S~~~~~~~~~~~~~a~~l~~~l~~l----~-----------------~~~~~lvGhS~Gg~ia~~~a~~--~~P~rV~~L 184 (360)
T PLN02679 128 SDKPPGFSYTMETWAELILDFLEEV----V-----------------QKPTVLIGNSVGSLACVIAASE--STRDLVRGL 184 (360)
T ss_pred CCCCCCccccHHHHHHHHHHHHHHh----c-----------------CCCeEEEEECHHHHHHHHHHHh--cChhhcCEE
Confidence 322 1346888888777776643 1 3589999999999999876641 124679999
Q ss_pred EEecCCC
Q 001306 238 LTLSSPH 244 (1104)
Q Consensus 238 ITLsTPH 244 (1104)
|+++++.
T Consensus 185 VLi~~~~ 191 (360)
T PLN02679 185 VLLNCAG 191 (360)
T ss_pred EEECCcc
Confidence 9999764
No 13
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.79 E-value=5.3e-08 Score=101.94 Aligned_cols=101 Identities=20% Similarity=0.181 Sum_probs=73.4
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-C
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE-H 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE-~ 160 (1104)
+|.||+|+||+.|+...++.+...+++ +++++++|+.+- .
T Consensus 27 ~~~~vv~~hG~~~~~~~~~~~~~~l~~---------------------------------------~~~vi~~D~~G~G~ 67 (278)
T TIGR03056 27 AGPLLLLLHGTGASTHSWRDLMPPLAR---------------------------------------SFRVVAPDLPGHGF 67 (278)
T ss_pred CCCeEEEEcCCCCCHHHHHHHHHHHhh---------------------------------------CcEEEeecCCCCCC
Confidence 467999999999999999988775432 257888898872 2
Q ss_pred CCc--c-hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEE
Q 001306 161 SAM--D-GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (1104)
Q Consensus 161 SAf--~-G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~I 237 (1104)
|.. . ..+++++++.+.+.++.+ . .++++||||||||.+|..++.. + +++++++
T Consensus 68 S~~~~~~~~~~~~~~~~l~~~i~~~----~-----------------~~~~~lvG~S~Gg~~a~~~a~~--~-p~~v~~~ 123 (278)
T TIGR03056 68 TRAPFRFRFTLPSMAEDLSALCAAE----G-----------------LSPDGVIGHSAGAAIALRLALD--G-PVTPRMV 123 (278)
T ss_pred CCCccccCCCHHHHHHHHHHHHHHc----C-----------------CCCceEEEECccHHHHHHHHHh--C-CcccceE
Confidence 221 1 246888887777666532 1 3568999999999999997752 2 4568999
Q ss_pred EEecCCCC
Q 001306 238 LTLSSPHQ 245 (1104)
Q Consensus 238 ITLsTPH~ 245 (1104)
|+++++..
T Consensus 124 v~~~~~~~ 131 (278)
T TIGR03056 124 VGINAALM 131 (278)
T ss_pred EEEcCccc
Confidence 99987543
No 14
>PLN02965 Probable pheophorbidase
Probab=98.74 E-value=3.3e-08 Score=104.95 Aligned_cols=99 Identities=21% Similarity=0.251 Sum_probs=73.2
Q ss_pred ccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCC
Q 001306 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSA 162 (1104)
Q Consensus 84 vPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SA 162 (1104)
.+||||||..++-..|+.+...+.. .+++++++|+.+ +.|.
T Consensus 4 ~~vvllHG~~~~~~~w~~~~~~L~~--------------------------------------~~~~via~Dl~G~G~S~ 45 (255)
T PLN02965 4 IHFVFVHGASHGAWCWYKLATLLDA--------------------------------------AGFKSTCVDLTGAGISL 45 (255)
T ss_pred eEEEEECCCCCCcCcHHHHHHHHhh--------------------------------------CCceEEEecCCcCCCCC
Confidence 4699999999999899988775421 146899999998 4443
Q ss_pred cc---hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEE
Q 001306 163 MD---GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLT 239 (1104)
Q Consensus 163 f~---G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IIT 239 (1104)
.. ..+++++|+.+.+.|+.+ . ..++++||||||||.||..++. .+ ++.|.++|.
T Consensus 46 ~~~~~~~~~~~~a~dl~~~l~~l----~----------------~~~~~~lvGhSmGG~ia~~~a~--~~-p~~v~~lvl 102 (255)
T PLN02965 46 TDSNTVSSSDQYNRPLFALLSDL----P----------------PDHKVILVGHSIGGGSVTEALC--KF-TDKISMAIY 102 (255)
T ss_pred CCccccCCHHHHHHHHHHHHHhc----C----------------CCCCEEEEecCcchHHHHHHHH--hC-chheeEEEE
Confidence 22 246788777777666643 1 0148999999999999999775 22 457999999
Q ss_pred ecCC
Q 001306 240 LSSP 243 (1104)
Q Consensus 240 LsTP 243 (1104)
++++
T Consensus 103 ~~~~ 106 (255)
T PLN02965 103 VAAA 106 (255)
T ss_pred Eccc
Confidence 9874
No 15
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.74 E-value=3.5e-08 Score=104.80 Aligned_cols=46 Identities=28% Similarity=0.468 Sum_probs=34.7
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCccc---c------cccEEEEecCCCCCCCcc
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRK---S------AVETVLTLSSPHQSPPLA 250 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~---~------~V~~IITLsTPH~~pPva 250 (1104)
..++++|||||||+|+|.++....-.. + ...+.||++|||.+....
T Consensus 77 ~~~IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~~~ 131 (217)
T PF05057_consen 77 IRKISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSRYA 131 (217)
T ss_pred cccceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCccc
Confidence 468999999999999999886322111 1 456789999999987544
No 16
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=98.73 E-value=4.3e-08 Score=98.66 Aligned_cols=95 Identities=28% Similarity=0.387 Sum_probs=65.6
Q ss_pred CC-ccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-
Q 001306 82 NG-VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE- 159 (1104)
Q Consensus 82 ~G-vPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE- 159 (1104)
+| -||||+||.+++.++|+.++..+.+ +++++++|+.+-
T Consensus 2 ~g~~~iv~~HG~~~~~~~~~~~~~~l~~---------------------------------------~~~vi~~d~~G~G 42 (245)
T TIGR01738 2 QGNVHLVLIHGWGMNAEVFRCLDEELSA---------------------------------------HFTLHLVDLPGHG 42 (245)
T ss_pred CCCceEEEEcCCCCchhhHHHHHHhhcc---------------------------------------CeEEEEecCCcCc
Confidence 46 5899999999999999988875421 257888888872
Q ss_pred CCC-cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEE
Q 001306 160 HSA-MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (1104)
Q Consensus 160 ~SA-f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~II 238 (1104)
.|. ..+.+++++++.+. +.. .+++++|||||||.+|..++.. + ++.++++|
T Consensus 43 ~s~~~~~~~~~~~~~~~~-------~~~------------------~~~~~lvG~S~Gg~~a~~~a~~--~-p~~v~~~i 94 (245)
T TIGR01738 43 RSRGFGPLSLADAAEAIA-------AQA------------------PDPAIWLGWSLGGLVALHIAAT--H-PDRVRALV 94 (245)
T ss_pred cCCCCCCcCHHHHHHHHH-------HhC------------------CCCeEEEEEcHHHHHHHHHHHH--C-HHhhheee
Confidence 222 23344555444332 111 2479999999999999887752 2 45699999
Q ss_pred EecCC
Q 001306 239 TLSSP 243 (1104)
Q Consensus 239 TLsTP 243 (1104)
.+++.
T Consensus 95 l~~~~ 99 (245)
T TIGR01738 95 TVASS 99 (245)
T ss_pred EecCC
Confidence 88754
No 17
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=98.72 E-value=1e-07 Score=95.44 Aligned_cols=98 Identities=26% Similarity=0.312 Sum_probs=66.6
Q ss_pred ccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCC
Q 001306 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSA 162 (1104)
Q Consensus 84 vPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SA 162 (1104)
.||||+||..|+-..++.++..+. .+++++++|+.+ +.|.
T Consensus 2 ~~vv~~hG~~~~~~~~~~~~~~L~---------------------------------------~~~~v~~~d~~g~G~s~ 42 (251)
T TIGR03695 2 PVLVFLHGFLGSGADWQALIELLG---------------------------------------PHFRCLAIDLPGHGSSQ 42 (251)
T ss_pred CEEEEEcCCCCchhhHHHHHHHhc---------------------------------------ccCeEEEEcCCCCCCCC
Confidence 589999999999999988776532 135889999987 2332
Q ss_pred c----chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEE
Q 001306 163 M----DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (1104)
Q Consensus 163 f----~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~II 238 (1104)
. ....+++.++ +.+..+++.+. .++++++||||||.+|..++.. + ++.|+++|
T Consensus 43 ~~~~~~~~~~~~~~~---~~~~~~~~~~~-----------------~~~~~l~G~S~Gg~ia~~~a~~--~-~~~v~~li 99 (251)
T TIGR03695 43 SPDEIERYDFEEAAQ---DILATLLDQLG-----------------IEPFFLVGYSMGGRIALYYALQ--Y-PERVQGLI 99 (251)
T ss_pred CCCccChhhHHHHHH---HHHHHHHHHcC-----------------CCeEEEEEeccHHHHHHHHHHh--C-chheeeeE
Confidence 2 2234444443 33344433322 3589999999999999997752 1 34689999
Q ss_pred EecCC
Q 001306 239 TLSSP 243 (1104)
Q Consensus 239 TLsTP 243 (1104)
.++++
T Consensus 100 l~~~~ 104 (251)
T TIGR03695 100 LESGS 104 (251)
T ss_pred EecCC
Confidence 88754
No 18
>PLN02578 hydrolase
Probab=98.67 E-value=1.1e-07 Score=107.01 Aligned_cols=100 Identities=25% Similarity=0.314 Sum_probs=71.3
Q ss_pred cCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-C
Q 001306 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-E 159 (1104)
Q Consensus 81 l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E 159 (1104)
.+|.|||||||..++...|+.+...+++ +++++++|+.+ +
T Consensus 84 g~g~~vvliHG~~~~~~~w~~~~~~l~~---------------------------------------~~~v~~~D~~G~G 124 (354)
T PLN02578 84 GEGLPIVLIHGFGASAFHWRYNIPELAK---------------------------------------KYKVYALDLLGFG 124 (354)
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHhc---------------------------------------CCEEEEECCCCCC
Confidence 3678999999999999999988765422 35899999998 3
Q ss_pred CCCc--chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEE
Q 001306 160 HSAM--DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (1104)
Q Consensus 160 ~SAf--~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~I 237 (1104)
.|.- ..-++.++++.+.+.++.+. .+++++|||||||.+|..++.. + ++.|+++
T Consensus 125 ~S~~~~~~~~~~~~a~~l~~~i~~~~---------------------~~~~~lvG~S~Gg~ia~~~A~~--~-p~~v~~l 180 (354)
T PLN02578 125 WSDKALIEYDAMVWRDQVADFVKEVV---------------------KEPAVLVGNSLGGFTALSTAVG--Y-PELVAGV 180 (354)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHhc---------------------cCCeEEEEECHHHHHHHHHHHh--C-hHhcceE
Confidence 3321 12345555555555444331 3579999999999999997752 2 5679999
Q ss_pred EEecCC
Q 001306 238 LTLSSP 243 (1104)
Q Consensus 238 ITLsTP 243 (1104)
|.++++
T Consensus 181 vLv~~~ 186 (354)
T PLN02578 181 ALLNSA 186 (354)
T ss_pred EEECCC
Confidence 999754
No 19
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=98.67 E-value=2.1e-07 Score=110.09 Aligned_cols=107 Identities=30% Similarity=0.343 Sum_probs=71.4
Q ss_pred CCccEEEecCCCCcHHHHHHH-HHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-C
Q 001306 82 NGVPVLFIPGNAGSYKQVRSL-AAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-E 159 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSL-As~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E 159 (1104)
.+.|||||||.+|+...|+.. ...+++. ...+++++++|+.+ +
T Consensus 200 ~k~~VVLlHG~~~s~~~W~~~~~~~L~~~-----------------------------------~~~~yrVia~Dl~G~G 244 (481)
T PLN03087 200 AKEDVLFIHGFISSSAFWTETLFPNFSDA-----------------------------------AKSTYRLFAVDLLGFG 244 (481)
T ss_pred CCCeEEEECCCCccHHHHHHHHHHHHHHH-----------------------------------hhCCCEEEEECCCCCC
Confidence 356999999999999888752 2322211 01257999999998 3
Q ss_pred CCCc---chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccE
Q 001306 160 HSAM---DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (1104)
Q Consensus 160 ~SAf---~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~ 236 (1104)
.|.- ..-+++++++.+. +.+++... .+++++|||||||.+|..++.. + ++.|++
T Consensus 245 ~S~~p~~~~ytl~~~a~~l~---~~ll~~lg-----------------~~k~~LVGhSmGG~iAl~~A~~--~-Pe~V~~ 301 (481)
T PLN03087 245 RSPKPADSLYTLREHLEMIE---RSVLERYK-----------------VKSFHIVAHSLGCILALALAVK--H-PGAVKS 301 (481)
T ss_pred CCcCCCCCcCCHHHHHHHHH---HHHHHHcC-----------------CCCEEEEEECHHHHHHHHHHHh--C-hHhccE
Confidence 3321 1135666665543 23333322 4689999999999999997752 2 457999
Q ss_pred EEEecCCCCC
Q 001306 237 VLTLSSPHQS 246 (1104)
Q Consensus 237 IITLsTPH~~ 246 (1104)
+|++++|...
T Consensus 302 LVLi~~~~~~ 311 (481)
T PLN03087 302 LTLLAPPYYP 311 (481)
T ss_pred EEEECCCccc
Confidence 9999987654
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=98.65 E-value=2.2e-07 Score=103.47 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=72.0
Q ss_pred ccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCC
Q 001306 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSA 162 (1104)
Q Consensus 84 vPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SA 162 (1104)
-+||++||.++++.-++.++..+.+ .+++++++|+.+ +.|.
T Consensus 55 ~~vll~HG~~~~~~~y~~~~~~l~~--------------------------------------~g~~v~~~D~~G~G~S~ 96 (330)
T PRK10749 55 RVVVICPGRIESYVKYAELAYDLFH--------------------------------------LGYDVLIIDHRGQGRSG 96 (330)
T ss_pred cEEEEECCccchHHHHHHHHHHHHH--------------------------------------CCCeEEEEcCCCCCCCC
Confidence 4799999999998888888875432 256899999998 3332
Q ss_pred c------ch--hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccc
Q 001306 163 M------DG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAV 234 (1104)
Q Consensus 163 f------~G--~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V 234 (1104)
- .| ..+.++++-+..+++.+...+ +..+++++||||||.+|..++.. + ++.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----------------~~~~~~l~GhSmGG~ia~~~a~~--~-p~~v 156 (330)
T PRK10749 97 RLLDDPHRGHVERFNDYVDDLAAFWQQEIQPG-----------------PYRKRYALAHSMGGAILTLFLQR--H-PGVF 156 (330)
T ss_pred CCCCCCCcCccccHHHHHHHHHHHHHHHHhcC-----------------CCCCeEEEEEcHHHHHHHHHHHh--C-CCCc
Confidence 1 11 356776666666666543221 14689999999999999886642 1 4568
Q ss_pred cEEEEecCCC
Q 001306 235 ETVLTLSSPH 244 (1104)
Q Consensus 235 ~~IITLsTPH 244 (1104)
+++|+++++.
T Consensus 157 ~~lvl~~p~~ 166 (330)
T PRK10749 157 DAIALCAPMF 166 (330)
T ss_pred ceEEEECchh
Confidence 9999887544
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.65 E-value=2.6e-07 Score=94.45 Aligned_cols=99 Identities=16% Similarity=0.230 Sum_probs=72.2
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
++-+|||+||..|+...|+..+..+.+ +++++++|+.+ +.
T Consensus 12 ~~~~iv~lhG~~~~~~~~~~~~~~l~~---------------------------------------~~~vi~~D~~G~G~ 52 (257)
T TIGR03611 12 DAPVVVLSSGLGGSGSYWAPQLDVLTQ---------------------------------------RFHVVTYDHRGTGR 52 (257)
T ss_pred CCCEEEEEcCCCcchhHHHHHHHHHHh---------------------------------------ccEEEEEcCCCCCC
Confidence 355799999999999888877654321 35889999997 33
Q ss_pred CCc---chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEE
Q 001306 161 SAM---DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (1104)
Q Consensus 161 SAf---~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~I 237 (1104)
|.. ...++.+.++.+.+.|+.+ + .++++++||||||.+|..++.. + ++.|+++
T Consensus 53 S~~~~~~~~~~~~~~~~~~~~i~~~----~-----------------~~~~~l~G~S~Gg~~a~~~a~~--~-~~~v~~~ 108 (257)
T TIGR03611 53 SPGELPPGYSIAHMADDVLQLLDAL----N-----------------IERFHFVGHALGGLIGLQLALR--Y-PERLLSL 108 (257)
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHh----C-----------------CCcEEEEEechhHHHHHHHHHH--C-hHHhHHh
Confidence 321 2246888888887777654 1 3579999999999999997752 1 3469999
Q ss_pred EEecCC
Q 001306 238 LTLSSP 243 (1104)
Q Consensus 238 ITLsTP 243 (1104)
|.+++.
T Consensus 109 i~~~~~ 114 (257)
T TIGR03611 109 VLINAW 114 (257)
T ss_pred eeecCC
Confidence 999753
No 22
>PHA02857 monoglyceride lipase; Provisional
Probab=98.62 E-value=1.5e-07 Score=100.44 Aligned_cols=105 Identities=18% Similarity=0.269 Sum_probs=72.3
Q ss_pred cEEEe-cCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCC
Q 001306 85 PVLFI-PGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSA 162 (1104)
Q Consensus 85 PVLFI-PGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SA 162 (1104)
|+||+ ||..++...++.++..+.+ .++.+++.|+.+ +.|.
T Consensus 26 ~~v~llHG~~~~~~~~~~~~~~l~~--------------------------------------~g~~via~D~~G~G~S~ 67 (276)
T PHA02857 26 ALVFISHGAGEHSGRYEELAENISS--------------------------------------LGILVFSHDHIGHGRSN 67 (276)
T ss_pred EEEEEeCCCccccchHHHHHHHHHh--------------------------------------CCCEEEEccCCCCCCCC
Confidence 55665 9999999999888775432 246899999998 3443
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecC
Q 001306 163 MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 163 f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsT 242 (1104)
-+...+.+.++++.++++.+..+ ++ ..+.++++|+||||||.+|..++.. .++.++++|.+++
T Consensus 68 ~~~~~~~~~~~~~~d~~~~l~~~-~~-------------~~~~~~~~lvG~S~GG~ia~~~a~~---~p~~i~~lil~~p 130 (276)
T PHA02857 68 GEKMMIDDFGVYVRDVVQHVVTI-KS-------------TYPGVPVFLLGHSMGATISILAAYK---NPNLFTAMILMSP 130 (276)
T ss_pred CccCCcCCHHHHHHHHHHHHHHH-Hh-------------hCCCCCEEEEEcCchHHHHHHHHHh---CccccceEEEecc
Confidence 33344566677777777765322 10 0114579999999999999997742 1346999999985
Q ss_pred CC
Q 001306 243 PH 244 (1104)
Q Consensus 243 PH 244 (1104)
+.
T Consensus 131 ~~ 132 (276)
T PHA02857 131 LV 132 (276)
T ss_pred cc
Confidence 43
No 23
>PRK03204 haloalkane dehalogenase; Provisional
Probab=98.62 E-value=2.2e-07 Score=101.29 Aligned_cols=100 Identities=21% Similarity=0.235 Sum_probs=73.1
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
.|-|||||||..++...|+.+...+.+ +++++++|+.+ +.
T Consensus 33 ~~~~iv~lHG~~~~~~~~~~~~~~l~~---------------------------------------~~~vi~~D~~G~G~ 73 (286)
T PRK03204 33 TGPPILLCHGNPTWSFLYRDIIVALRD---------------------------------------RFRCVAPDYLGFGL 73 (286)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHHhC---------------------------------------CcEEEEECCCCCCC
Confidence 467999999998888888877654321 36899999998 33
Q ss_pred CCc---chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEE
Q 001306 161 SAM---DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (1104)
Q Consensus 161 SAf---~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~I 237 (1104)
|.- .+.+++++++.+.+.++.+ . .+++++|||||||.||..++.. + ++.|+++
T Consensus 74 S~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------~~~~~lvG~S~Gg~va~~~a~~--~-p~~v~~l 129 (286)
T PRK03204 74 SERPSGFGYQIDEHARVIGEFVDHL----G-----------------LDRYLSMGQDWGGPISMAVAVE--R-ADRVRGV 129 (286)
T ss_pred CCCCCccccCHHHHHHHHHHHHHHh----C-----------------CCCEEEEEECccHHHHHHHHHh--C-hhheeEE
Confidence 432 1346788888877666553 1 3579999999999999987752 1 4579999
Q ss_pred EEecCCC
Q 001306 238 LTLSSPH 244 (1104)
Q Consensus 238 ITLsTPH 244 (1104)
|+++++.
T Consensus 130 vl~~~~~ 136 (286)
T PRK03204 130 VLGNTWF 136 (286)
T ss_pred EEECccc
Confidence 9887654
No 24
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.61 E-value=3.2e-07 Score=94.93 Aligned_cols=102 Identities=15% Similarity=0.180 Sum_probs=66.5
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
.+.||||+||..|+...+........+. .+++++++|+.+ +.
T Consensus 24 ~~~~vl~~hG~~g~~~~~~~~~~~~l~~-------------------------------------~g~~vi~~d~~G~G~ 66 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSHEYLENLRELLKE-------------------------------------EGREVIMYDQLGCGY 66 (288)
T ss_pred CCCeEEEEcCCCCccHHHHHHHHHHHHh-------------------------------------cCCEEEEEcCCCCCC
Confidence 4679999999988877665443322110 146899999998 33
Q ss_pred CCcch-----hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCccccccc
Q 001306 161 SAMDG-----QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVE 235 (1104)
Q Consensus 161 SAf~G-----~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~ 235 (1104)
|.... .++++.++.+.+.++.+ . .+++++|||||||.+|..++.. + ++.++
T Consensus 67 s~~~~~~~~~~~~~~~~~~~~~~~~~~----~-----------------~~~~~liG~S~Gg~ia~~~a~~--~-p~~v~ 122 (288)
T TIGR01250 67 SDQPDDSDELWTIDYFVDELEEVREKL----G-----------------LDKFYLLGHSWGGMLAQEYALK--Y-GQHLK 122 (288)
T ss_pred CCCCCcccccccHHHHHHHHHHHHHHc----C-----------------CCcEEEEEeehHHHHHHHHHHh--C-ccccc
Confidence 32211 24666665554443322 1 3469999999999999997752 2 45699
Q ss_pred EEEEecCCC
Q 001306 236 TVLTLSSPH 244 (1104)
Q Consensus 236 ~IITLsTPH 244 (1104)
++|.+++..
T Consensus 123 ~lvl~~~~~ 131 (288)
T TIGR01250 123 GLIISSMLD 131 (288)
T ss_pred eeeEecccc
Confidence 999887543
No 25
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=98.58 E-value=6.4e-07 Score=103.18 Aligned_cols=101 Identities=19% Similarity=0.169 Sum_probs=77.6
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
.|.|||||||..++-..||.++..+.+ +++++++|+.+ +.
T Consensus 126 ~~~~ivllHG~~~~~~~w~~~~~~L~~---------------------------------------~~~Via~DlpG~G~ 166 (383)
T PLN03084 126 NNPPVLLIHGFPSQAYSYRKVLPVLSK---------------------------------------NYHAIAFDWLGFGF 166 (383)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhc---------------------------------------CCEEEEECCCCCCC
Confidence 467999999999999999988775421 35899999998 34
Q ss_pred CCcc------hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccc
Q 001306 161 SAMD------GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAV 234 (1104)
Q Consensus 161 SAf~------G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V 234 (1104)
|.-. ..++.++++.+.+.++.+ . .++++||||||||.||..++.. + ++.|
T Consensus 167 S~~p~~~~~~~ys~~~~a~~l~~~i~~l----~-----------------~~~~~LvG~s~GG~ia~~~a~~--~-P~~v 222 (383)
T PLN03084 167 SDKPQPGYGFNYTLDEYVSSLESLIDEL----K-----------------SDKVSLVVQGYFSPPVVKYASA--H-PDKI 222 (383)
T ss_pred CCCCcccccccCCHHHHHHHHHHHHHHh----C-----------------CCCceEEEECHHHHHHHHHHHh--C-hHhh
Confidence 4322 147888888888887765 1 3579999999999999887752 2 4679
Q ss_pred cEEEEecCCCC
Q 001306 235 ETVLTLSSPHQ 245 (1104)
Q Consensus 235 ~~IITLsTPH~ 245 (1104)
+++|++++|..
T Consensus 223 ~~lILi~~~~~ 233 (383)
T PLN03084 223 KKLILLNPPLT 233 (383)
T ss_pred cEEEEECCCCc
Confidence 99999998754
No 26
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=98.58 E-value=2.4e-07 Score=103.95 Aligned_cols=124 Identities=17% Similarity=0.198 Sum_probs=83.6
Q ss_pred CCCCceEEEEeeCCcccchhHhhcccCCccEEEecCCCCcHH-----HHHHHHHHHHHHhcCCCCcchhhhhhhhccccC
Q 001306 56 SSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYK-----QVRSLAAESDRAYQGGPLEHSFYQEASLTLEEG 130 (1104)
Q Consensus 56 ~a~kY~LYlYrEg~~~~~~~~~~~~l~GvPVLFIPGNAGSYk-----QvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~ 130 (1104)
....+.|+.|.-... .....|||++||-..+.- ..||++..+.+
T Consensus 44 ~~~~~~l~~~~~~~~---------~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~---------------------- 92 (350)
T TIGR01836 44 REDKVVLYRYTPVKD---------NTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLE---------------------- 92 (350)
T ss_pred EcCcEEEEEecCCCC---------cCCCCcEEEeccccccceeccCCCCchHHHHHHH----------------------
Confidence 356899999953211 124579999999532221 13566554321
Q ss_pred CccccccccccccccccceeEEEEeCCCCCCCcchhhHHHHHH-HHHHHHHHHHHHcccchhhhhhcccccCCCCCceEE
Q 001306 131 GVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMDGQILEEHAE-YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVI 209 (1104)
Q Consensus 131 ~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~SAf~G~tL~dQAe-yVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sVi 209 (1104)
.++++|++|+.+...+-...++.+.++ .+.++++++++.+. .++++
T Consensus 93 ----------------~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~-----------------~~~i~ 139 (350)
T TIGR01836 93 ----------------RGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSK-----------------LDQIS 139 (350)
T ss_pred ----------------CCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhC-----------------CCccc
Confidence 257999999976433333346777764 47888888875542 46899
Q ss_pred EEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCC
Q 001306 210 LVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 210 LVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~ 246 (1104)
+|||||||.++..++.. + ++.|+++|++++|...
T Consensus 140 lvGhS~GG~i~~~~~~~--~-~~~v~~lv~~~~p~~~ 173 (350)
T TIGR01836 140 LLGICQGGTFSLCYAAL--Y-PDKIKNLVTMVTPVDF 173 (350)
T ss_pred EEEECHHHHHHHHHHHh--C-chheeeEEEecccccc
Confidence 99999999999887652 1 3469999999987753
No 27
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=98.58 E-value=2.6e-07 Score=100.69 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=72.2
Q ss_pred cCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCC
Q 001306 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (1104)
Q Consensus 81 l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~ 160 (1104)
.++-+|+||||..++-..|+.++..+.+ .+++++++|+++..
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~--------------------------------------~g~~vi~~dl~g~G 57 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMEN--------------------------------------SGYKVTCIDLKSAG 57 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHh--------------------------------------CCCEEEEecccCCC
Confidence 3456799999999988888877765321 14689999999843
Q ss_pred -CCcc---hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccE
Q 001306 161 -SAMD---GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (1104)
Q Consensus 161 -SAf~---G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~ 236 (1104)
+.-. ..++++.++.+.+.|+.+ . ..++++||||||||+++..++.. + ++.|++
T Consensus 58 ~s~~~~~~~~~~~~~~~~l~~~i~~l----~----------------~~~~v~lvGhS~GG~v~~~~a~~--~-p~~v~~ 114 (273)
T PLN02211 58 IDQSDADSVTTFDEYNKPLIDFLSSL----P----------------ENEKVILVGHSAGGLSVTQAIHR--F-PKKICL 114 (273)
T ss_pred CCCCCcccCCCHHHHHHHHHHHHHhc----C----------------CCCCEEEEEECchHHHHHHHHHh--C-hhheeE
Confidence 2111 157888777766666542 1 13589999999999999998752 2 457999
Q ss_pred EEEecC
Q 001306 237 VLTLSS 242 (1104)
Q Consensus 237 IITLsT 242 (1104)
+|.+++
T Consensus 115 lv~~~~ 120 (273)
T PLN02211 115 AVYVAA 120 (273)
T ss_pred EEEecc
Confidence 999965
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=98.57 E-value=1.8e-07 Score=94.17 Aligned_cols=98 Identities=15% Similarity=0.241 Sum_probs=70.4
Q ss_pred cEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCCc
Q 001306 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSAM 163 (1104)
Q Consensus 85 PVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SAf 163 (1104)
++||+||++++...++.++..+. .+++++++|+.+ +.|..
T Consensus 15 ~li~~hg~~~~~~~~~~~~~~l~---------------------------------------~~~~v~~~d~~G~G~s~~ 55 (251)
T TIGR02427 15 VLVFINSLGTDLRMWDPVLPALT---------------------------------------PDFRVLRYDKRGHGLSDA 55 (251)
T ss_pred eEEEEcCcccchhhHHHHHHHhh---------------------------------------cccEEEEecCCCCCCCCC
Confidence 57889999999988887766431 146889999987 33322
Q ss_pred ch--hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEec
Q 001306 164 DG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 164 ~G--~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLs 241 (1104)
.. .++.++++.+.+.++.+ . .++++++||||||.+|..++.. .++.++++|+++
T Consensus 56 ~~~~~~~~~~~~~~~~~i~~~----~-----------------~~~v~liG~S~Gg~~a~~~a~~---~p~~v~~li~~~ 111 (251)
T TIGR02427 56 PEGPYSIEDLADDVLALLDHL----G-----------------IERAVFCGLSLGGLIAQGLAAR---RPDRVRALVLSN 111 (251)
T ss_pred CCCCCCHHHHHHHHHHHHHHh----C-----------------CCceEEEEeCchHHHHHHHHHH---CHHHhHHHhhcc
Confidence 21 36777777776666543 1 3579999999999999987752 245699999998
Q ss_pred CCCC
Q 001306 242 SPHQ 245 (1104)
Q Consensus 242 TPH~ 245 (1104)
+++.
T Consensus 112 ~~~~ 115 (251)
T TIGR02427 112 TAAK 115 (251)
T ss_pred Cccc
Confidence 7654
No 29
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.55 E-value=6.9e-07 Score=85.40 Aligned_cols=93 Identities=28% Similarity=0.414 Sum_probs=67.8
Q ss_pred cEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCCCcc
Q 001306 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMD 164 (1104)
Q Consensus 85 PVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~SAf~ 164 (1104)
||+|+||++|+.+++..++..+++ .++.++++|.++....
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~--------------------------------------~G~~v~~~~~~~~~~~-- 40 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAE--------------------------------------QGYAVVAFDYPGHGDS-- 40 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHH--------------------------------------TTEEEEEESCTTSTTS--
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH--------------------------------------CCCEEEEEecCCCCcc--
Confidence 799999999999999888886543 1568899999876554
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecC
Q 001306 165 GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 165 G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsT 242 (1104)
+..+.+.++++.+...+. ++.+++++||||||.+|..++.. ...++++|+++.
T Consensus 41 -----~~~~~~~~~~~~~~~~~~----------------~~~~i~l~G~S~Gg~~a~~~~~~----~~~v~~~v~~~~ 93 (145)
T PF12695_consen 41 -----DGADAVERVLADIRAGYP----------------DPDRIILIGHSMGGAIAANLAAR----NPRVKAVVLLSP 93 (145)
T ss_dssp -----HHSHHHHHHHHHHHHHHC----------------TCCEEEEEEETHHHHHHHHHHHH----STTESEEEEESE
T ss_pred -----chhHHHHHHHHHHHhhcC----------------CCCcEEEEEEccCcHHHHHHhhh----ccceeEEEEecC
Confidence 222344555555432221 36799999999999999997752 145999999985
No 30
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.54 E-value=1.6e-07 Score=104.94 Aligned_cols=74 Identities=20% Similarity=0.216 Sum_probs=52.8
Q ss_pred ceeEEEEeCCCCC-CCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCc-eEEEEEEchhHHHHHHHHh
Q 001306 148 RLDWFAVDLEGEH-SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPK-SVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 148 ~lD~FaVDFnEE~-SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~-sViLVGHSMGGiVAr~~l~ 225 (1104)
++.++++|+.+.. |.-.+.++.++|+-+.+.++.+ . .+ .++||||||||.||..++.
T Consensus 99 ~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l----~-----------------l~~~~~lvG~SmGG~vA~~~A~ 157 (343)
T PRK08775 99 RFRLLAFDFIGADGSLDVPIDTADQADAIALLLDAL----G-----------------IARLHAFVGYSYGALVGLQFAS 157 (343)
T ss_pred ccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHc----C-----------------CCcceEEEEECHHHHHHHHHHH
Confidence 5799999999843 3222345777777776666543 1 23 4589999999999999775
Q ss_pred CCCcccccccEEEEecCCCC
Q 001306 226 HPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 226 ~P~~~~~~V~~IITLsTPH~ 245 (1104)
.+ +++|+++|++++...
T Consensus 158 --~~-P~~V~~LvLi~s~~~ 174 (343)
T PRK08775 158 --RH-PARVRTLVVVSGAHR 174 (343)
T ss_pred --HC-hHhhheEEEECcccc
Confidence 22 467999999987654
No 31
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=98.53 E-value=4.7e-07 Score=100.30 Aligned_cols=103 Identities=27% Similarity=0.320 Sum_probs=72.7
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-C
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE-H 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE-~ 160 (1104)
++.||||+||..|+..+++.++..+.+ .+.++++|+++. .
T Consensus 130 ~~~~vl~~HG~~~~~~~~~~~~~~l~~---------------------------------------~~~v~~~d~~g~G~ 170 (371)
T PRK14875 130 DGTPVVLIHGFGGDLNNWLFNHAALAA---------------------------------------GRPVIALDLPGHGA 170 (371)
T ss_pred CCCeEEEECCCCCccchHHHHHHHHhc---------------------------------------CCEEEEEcCCCCCC
Confidence 467999999999999999988775322 257889999873 2
Q ss_pred C--CcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEE
Q 001306 161 S--AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (1104)
Q Consensus 161 S--Af~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~II 238 (1104)
| .....++.+.++.+.+.++. +. +++++|+||||||.+|..++.. + ++.++++|
T Consensus 171 s~~~~~~~~~~~~~~~~~~~~~~----~~-----------------~~~~~lvG~S~Gg~~a~~~a~~--~-~~~v~~lv 226 (371)
T PRK14875 171 SSKAVGAGSLDELAAAVLAFLDA----LG-----------------IERAHLVGHSMGGAVALRLAAR--A-PQRVASLT 226 (371)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHh----cC-----------------CccEEEEeechHHHHHHHHHHh--C-chheeEEE
Confidence 2 11224566666665554433 21 4579999999999999987652 1 45699999
Q ss_pred EecCCCCCC
Q 001306 239 TLSSPHQSP 247 (1104)
Q Consensus 239 TLsTPH~~p 247 (1104)
.++++...+
T Consensus 227 ~~~~~~~~~ 235 (371)
T PRK14875 227 LIAPAGLGP 235 (371)
T ss_pred EECcCCcCc
Confidence 998664433
No 32
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=98.53 E-value=6.5e-07 Score=103.43 Aligned_cols=103 Identities=21% Similarity=0.255 Sum_probs=73.6
Q ss_pred cEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-CCC-
Q 001306 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE-HSA- 162 (1104)
Q Consensus 85 PVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE-~SA- 162 (1104)
+||||||..++...++.++..+.+ .++.++++|..+. .|.
T Consensus 138 ~Vl~lHG~~~~~~~~~~~a~~L~~--------------------------------------~Gy~V~~~D~rGhG~S~~ 179 (395)
T PLN02652 138 ILIIIHGLNEHSGRYLHFAKQLTS--------------------------------------CGFGVYAMDWIGHGGSDG 179 (395)
T ss_pred EEEEECCchHHHHHHHHHHHHHHH--------------------------------------CCCEEEEeCCCCCCCCCC
Confidence 799999999988888877765422 2568999999983 232
Q ss_pred cch--hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEe
Q 001306 163 MDG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (1104)
Q Consensus 163 f~G--~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITL 240 (1104)
-.| ..++++++-+.++++++...+. ..+++++||||||.+|..++..|+. ++.++++|+.
T Consensus 180 ~~~~~~~~~~~~~Dl~~~l~~l~~~~~-----------------~~~i~lvGhSmGG~ial~~a~~p~~-~~~v~glVL~ 241 (395)
T PLN02652 180 LHGYVPSLDYVVEDTEAFLEKIRSENP-----------------GVPCFLFGHSTGGAVVLKAASYPSI-EDKLEGIVLT 241 (395)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHHhCC-----------------CCCEEEEEECHHHHHHHHHHhccCc-ccccceEEEE
Confidence 112 2566666777777777643321 2479999999999999988776653 4579999998
Q ss_pred cCC
Q 001306 241 SSP 243 (1104)
Q Consensus 241 sTP 243 (1104)
++.
T Consensus 242 sP~ 244 (395)
T PLN02652 242 SPA 244 (395)
T ss_pred Ccc
Confidence 643
No 33
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.51 E-value=4.7e-07 Score=101.28 Aligned_cols=103 Identities=20% Similarity=0.270 Sum_probs=67.2
Q ss_pred ccEEEecCCCCcHHH-HHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-CC
Q 001306 84 VPVLFIPGNAGSYKQ-VRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE-HS 161 (1104)
Q Consensus 84 vPVLFIPGNAGSYkQ-vRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE-~S 161 (1104)
.+|||+||.+++... ++.++..+++ .++.++++|+.+- .|
T Consensus 88 ~~iv~lHG~~~~~~~~~~~~~~~l~~--------------------------------------~g~~v~~~D~~G~G~S 129 (349)
T PLN02385 88 AAVCFCHGYGDTCTFFFEGIARKIAS--------------------------------------SGYGVFAMDYPGFGLS 129 (349)
T ss_pred eEEEEECCCCCccchHHHHHHHHHHh--------------------------------------CCCEEEEecCCCCCCC
Confidence 579999999887654 4666654321 2579999999983 33
Q ss_pred C-cch--hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEE
Q 001306 162 A-MDG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETV 237 (1104)
Q Consensus 162 A-f~G--~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~I 237 (1104)
. ..| .++.+.++-+.+.++.+.... ..++.+++|+||||||.||..++. +| +.++++
T Consensus 130 ~~~~~~~~~~~~~~~dv~~~l~~l~~~~---------------~~~~~~~~LvGhSmGG~val~~a~~~p----~~v~gl 190 (349)
T PLN02385 130 EGLHGYIPSFDDLVDDVIEHYSKIKGNP---------------EFRGLPSFLFGQSMGGAVALKVHLKQP----NAWDGA 190 (349)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHhcc---------------ccCCCCEEEEEeccchHHHHHHHHhCc----chhhhe
Confidence 2 223 256665555554444432110 112457999999999999998764 34 569999
Q ss_pred EEecCC
Q 001306 238 LTLSSP 243 (1104)
Q Consensus 238 ITLsTP 243 (1104)
|.+++.
T Consensus 191 VLi~p~ 196 (349)
T PLN02385 191 ILVAPM 196 (349)
T ss_pred eEeccc
Confidence 999853
No 34
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.47 E-value=9.2e-07 Score=97.63 Aligned_cols=80 Identities=16% Similarity=0.205 Sum_probs=55.9
Q ss_pred ceeEEEEeCCC-CCCC-cch--hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHH
Q 001306 148 RLDWFAVDLEG-EHSA-MDG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAA 223 (1104)
Q Consensus 148 ~lD~FaVDFnE-E~SA-f~G--~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~ 223 (1104)
+++++++|+.+ +.|. ..| ..+.++++-+..+|+++..... .+..+++|+||||||.+|..+
T Consensus 87 Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---------------~~~~~i~l~GhSmGG~ia~~~ 151 (330)
T PLN02298 87 GFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREE---------------FQGLPRFLYGESMGGAICLLI 151 (330)
T ss_pred CCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhccc---------------CCCCCEEEEEecchhHHHHHH
Confidence 67999999998 3332 222 3677778888888877743210 113469999999999999886
Q ss_pred HhCCCcccccccEEEEecCCCC
Q 001306 224 IIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 224 l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
... + ++.|+++|+++++..
T Consensus 152 a~~--~-p~~v~~lvl~~~~~~ 170 (330)
T PLN02298 152 HLA--N-PEGFDGAVLVAPMCK 170 (330)
T ss_pred Hhc--C-cccceeEEEeccccc
Confidence 642 1 356999999986544
No 35
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.46 E-value=7.5e-07 Score=113.31 Aligned_cols=131 Identities=23% Similarity=0.265 Sum_probs=85.8
Q ss_pred CCCCceEEEEeeCCcccchhHhhcccCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCcccc
Q 001306 56 SSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNID 135 (1104)
Q Consensus 56 ~a~kY~LYlYrEg~~~~~~~~~~~~l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e 135 (1104)
...+++||.|.-..+++ ..+..|.|||||||..+++..|+-......-.+ +.
T Consensus 45 ~~~~~~l~~y~~~~~~~-----~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~---------L~-------------- 96 (994)
T PRK07868 45 SVPMYRLRRYFPPDNRP-----GQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGI---------LH-------------- 96 (994)
T ss_pred EcCcEEEEEeCCCCccc-----cccCCCCcEEEECCCCCCccceecCCcccHHHH---------HH--------------
Confidence 36789999994322111 112478999999999999999885422100000 00
Q ss_pred ccccccccccccceeEEEEeCCCCCCCcch---hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEE
Q 001306 136 ASIFHSSNQYTRRLDWFAVDLEGEHSAMDG---QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVG 212 (1104)
Q Consensus 136 ~~~~~~~~~~~~~lD~FaVDFnEE~SAf~G---~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVG 212 (1104)
..++++|++|+.. ...-.+ .++.+.++++.++++.+..+- .+++++||
T Consensus 97 ----------~~g~~v~~~d~G~-~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~------------------~~~v~lvG 147 (994)
T PRK07868 97 ----------RAGLDPWVIDFGS-PDKVEGGMERNLADHVVALSEAIDTVKDVT------------------GRDVHLVG 147 (994)
T ss_pred ----------HCCCEEEEEcCCC-CChhHcCccCCHHHHHHHHHHHHHHHHHhh------------------CCceEEEE
Confidence 1257999999843 222212 467777777777777664331 24799999
Q ss_pred EchhHHHHHHHHhCCCcccccccEEEEecCCCC
Q 001306 213 HSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 213 HSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
|||||.+|..++.. +.++.|+++|+++||.+
T Consensus 148 ~s~GG~~a~~~aa~--~~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 148 YSQGGMFCYQAAAY--RRSKDIASIVTFGSPVD 178 (994)
T ss_pred EChhHHHHHHHHHh--cCCCccceEEEEecccc
Confidence 99999999887642 22457999999999965
No 36
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.46 E-value=1.2e-06 Score=92.98 Aligned_cols=39 Identities=18% Similarity=0.266 Sum_probs=31.6
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~ 246 (1104)
.+++++|||||||.+|..++.. + ++.|+++|.++++...
T Consensus 100 ~~~~~lvG~S~Gg~ia~~~a~~--~-p~~v~~lvl~~~~~~~ 138 (282)
T TIGR03343 100 IEKAHLVGNSMGGATALNFALE--Y-PDRIGKLILMGPGGLG 138 (282)
T ss_pred CCCeeEEEECchHHHHHHHHHh--C-hHhhceEEEECCCCCC
Confidence 4689999999999999997752 2 5679999999976543
No 37
>PRK06489 hypothetical protein; Provisional
Probab=98.45 E-value=5.4e-07 Score=101.50 Aligned_cols=106 Identities=19% Similarity=0.191 Sum_probs=66.3
Q ss_pred CccEEEecCCCCcHHHHH--HHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-
Q 001306 83 GVPVLFIPGNAGSYKQVR--SLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE- 159 (1104)
Q Consensus 83 GvPVLFIPGNAGSYkQvR--SLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE- 159 (1104)
|.|||||||..||..+|+ .++..+.+. . . .--..++.++++|+.+-
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~-------------~-------~-----------~l~~~~~~Via~Dl~GhG 117 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGP-------------G-------Q-----------PLDASKYFIILPDGIGHG 117 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCC-------------C-------C-----------cccccCCEEEEeCCCCCC
Confidence 779999999999988886 344332100 0 0 00013579999999983
Q ss_pred CCCcc---------hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceE-EEEEEchhHHHHHHHHh-CCC
Q 001306 160 HSAMD---------GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSV-ILVGHSVGGFVARAAII-HPL 228 (1104)
Q Consensus 160 ~SAf~---------G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sV-iLVGHSMGGiVAr~~l~-~P~ 228 (1104)
.|..- .-++++.++. .+..+++... .+++ ++|||||||.||..++. +|
T Consensus 118 ~S~~p~~~~~~~~~~~~~~~~a~~---~~~~l~~~lg-----------------i~~~~~lvG~SmGG~vAl~~A~~~P- 176 (360)
T PRK06489 118 KSSKPSDGLRAAFPRYDYDDMVEA---QYRLVTEGLG-----------------VKHLRLILGTSMGGMHAWMWGEKYP- 176 (360)
T ss_pred CCCCCCcCCCCCCCcccHHHHHHH---HHHHHHHhcC-----------------CCceeEEEEECHHHHHHHHHHHhCc-
Confidence 34321 1245554443 3333322211 3466 58999999999999775 44
Q ss_pred cccccccEEEEecCC
Q 001306 229 LRKSAVETVLTLSSP 243 (1104)
Q Consensus 229 ~~~~~V~~IITLsTP 243 (1104)
++|+++|++++.
T Consensus 177 ---~~V~~LVLi~s~ 188 (360)
T PRK06489 177 ---DFMDALMPMASQ 188 (360)
T ss_pred ---hhhheeeeeccC
Confidence 569999999863
No 38
>PRK05855 short chain dehydrogenase; Validated
Probab=98.42 E-value=1.4e-06 Score=102.04 Aligned_cols=102 Identities=19% Similarity=0.258 Sum_probs=74.7
Q ss_pred CccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCC
Q 001306 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHS 161 (1104)
Q Consensus 83 GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~S 161 (1104)
+-||||+||..++...|+.+...+. .+++++++|+.+ +.|
T Consensus 25 ~~~ivllHG~~~~~~~w~~~~~~L~---------------------------------------~~~~Vi~~D~~G~G~S 65 (582)
T PRK05855 25 RPTVVLVHGYPDNHEVWDGVAPLLA---------------------------------------DRFRVVAYDVRGAGRS 65 (582)
T ss_pred CCeEEEEcCCCchHHHHHHHHHHhh---------------------------------------cceEEEEecCCCCCCC
Confidence 5689999999999999988776431 146899999998 344
Q ss_pred Cc----chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEE
Q 001306 162 AM----DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (1104)
Q Consensus 162 Af----~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~I 237 (1104)
.- .+.++.++++-+.++++.+ . ..++++||||||||.+|..++..+.+ ++.+..+
T Consensus 66 ~~~~~~~~~~~~~~a~dl~~~i~~l----~----------------~~~~~~lvGhS~Gg~~a~~~a~~~~~-~~~v~~~ 124 (582)
T PRK05855 66 SAPKRTAAYTLARLADDFAAVIDAV----S----------------PDRPVHLLAHDWGSIQGWEAVTRPRA-AGRIASF 124 (582)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHh----C----------------CCCcEEEEecChHHHHHHHHHhCccc-hhhhhhh
Confidence 31 2346888888887777754 1 12459999999999999888776654 4556666
Q ss_pred EEecCCC
Q 001306 238 LTLSSPH 244 (1104)
Q Consensus 238 ITLsTPH 244 (1104)
+.++.|+
T Consensus 125 ~~~~~~~ 131 (582)
T PRK05855 125 TSVSGPS 131 (582)
T ss_pred eeccCCc
Confidence 6666665
No 39
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=98.42 E-value=2.1e-06 Score=94.68 Aligned_cols=99 Identities=21% Similarity=0.212 Sum_probs=67.6
Q ss_pred ccEEEecCCCCc----HHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-
Q 001306 84 VPVLFIPGNAGS----YKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG- 158 (1104)
Q Consensus 84 vPVLFIPGNAGS----YkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE- 158 (1104)
-+|||+||+++. .+.++.++..+++ .++.++++|+.+
T Consensus 26 ~~VlllHG~g~~~~~~~~~~~~la~~La~--------------------------------------~Gy~Vl~~Dl~G~ 67 (266)
T TIGR03101 26 GVVIYLPPFAEEMNKSRRMVALQARAFAA--------------------------------------GGFGVLQIDLYGC 67 (266)
T ss_pred eEEEEECCCcccccchhHHHHHHHHHHHH--------------------------------------CCCEEEEECCCCC
Confidence 358899999863 4567767665432 256889999987
Q ss_pred CCCC--cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccE
Q 001306 159 EHSA--MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (1104)
Q Consensus 159 E~SA--f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~ 236 (1104)
+.|. .......+.++.+.++++++.+.. .++++|+||||||.+|..++.. + ++.+++
T Consensus 68 G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~------------------~~~v~LvG~SmGG~vAl~~A~~--~-p~~v~~ 126 (266)
T TIGR03101 68 GDSAGDFAAARWDVWKEDVAAAYRWLIEQG------------------HPPVTLWGLRLGALLALDAANP--L-AAKCNR 126 (266)
T ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHhcC------------------CCCEEEEEECHHHHHHHHHHHh--C-ccccce
Confidence 2332 122345666677777777764221 3589999999999999986642 1 356899
Q ss_pred EEEec
Q 001306 237 VLTLS 241 (1104)
Q Consensus 237 IITLs 241 (1104)
+|.++
T Consensus 127 lVL~~ 131 (266)
T TIGR03101 127 LVLWQ 131 (266)
T ss_pred EEEec
Confidence 99997
No 40
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.41 E-value=1.3e-06 Score=98.06 Aligned_cols=202 Identities=18% Similarity=0.225 Sum_probs=119.0
Q ss_pred cCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCC
Q 001306 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (1104)
Q Consensus 81 l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~ 160 (1104)
.+.-|++++||-.||-+-|||++..++++. +-++|+||.....
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l-------------------------------------~~~v~~vd~RnHG 92 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKL-------------------------------------GRDVYAVDVRNHG 92 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccc-------------------------------------cCceEEEecccCC
Confidence 467799999999999999999999876531 1289999999733
Q ss_pred CC--cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccE-E
Q 001306 161 SA--MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET-V 237 (1104)
Q Consensus 161 SA--f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~-I 237 (1104)
.. ..++.=..||+-+.+.|+.....|. -.+++|+||||||++++++.+. . .+..+.. |
T Consensus 93 ~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~-----------------~~~~~l~GHsmGG~~~~m~~t~-~-~p~~~~rli 153 (315)
T KOG2382|consen 93 SSPKITVHNYEAMAEDVKLFIDGVGGSTR-----------------LDPVVLLGHSMGGVKVAMAETL-K-KPDLIERLI 153 (315)
T ss_pred CCccccccCHHHHHHHHHHHHHHcccccc-----------------cCCceecccCcchHHHHHHHHH-h-cCcccceeE
Confidence 22 3334456666666666665432221 3589999999999333333331 1 2334554 4
Q ss_pred EEecCCCCCCCcccCcchHHHHHHHH-----------------------------HHHHhccc-CCCCCCCcc-------
Q 001306 238 LTLSSPHQSPPLALQPSLGNYFARVN-----------------------------DEWRKGYE-AHTTPTGHH------- 280 (1104)
Q Consensus 238 ITLsTPH~~pPvafD~~l~~fY~~vn-----------------------------~~W~~~~~-~~~s~~~~~------- 280 (1104)
|.=.||-..+. -+....++|+.+. ++-..++. .....+-.|
T Consensus 154 v~D~sP~~~~~--~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i 231 (315)
T KOG2382|consen 154 VEDISPGGVGR--SYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSI 231 (315)
T ss_pred EEecCCccCCc--ccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHH
Confidence 44455532111 1122233333321 11122222 111122223
Q ss_pred -------------c--cCCCCCcceEEEEecCCCCccccCCCccccCCCCCCcceeeeecccCce--eecCCCchhhhhH
Q 001306 281 -------------V--SNSRLSHVVVVSISAGYHDYQVRSKIESLDGIVPPTHGFMISSTGMKNV--WLSMEHQAILWCN 343 (1104)
Q Consensus 281 -------------~--~~~~l~~V~LVSIaGG~rD~~VPsdlTsl~~lvP~t~g~tV~TTsIPgV--Wvs~DH~aIVWC~ 343 (1104)
. .+.+ ...+++-|.|..++++..+.+..+..++|. +..-.+++. |++.|.+.
T Consensus 232 ~~~~~~~~~~s~~~~l~~~~-~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-----~e~~~ld~aGHwVh~E~P~----- 300 (315)
T KOG2382|consen 232 ASLLDEYEILSYWADLEDGP-YTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-----VEVHELDEAGHWVHLEKPE----- 300 (315)
T ss_pred HHHHHHHHhhcccccccccc-cccceeEEecCCCCCcChhHHHHHHHhccc-----hheeecccCCceeecCCHH-----
Confidence 0 1122 245889999998888777778888888887 344457755 99999874
Q ss_pred HHHHHHHH
Q 001306 344 QLVVQVSH 351 (1104)
Q Consensus 344 QLv~~IAr 351 (1104)
++.+.|..
T Consensus 301 ~~~~~i~~ 308 (315)
T KOG2382|consen 301 EFIESISE 308 (315)
T ss_pred HHHHHHHH
Confidence 45555555
No 41
>PRK10985 putative hydrolase; Provisional
Probab=98.39 E-value=9.3e-07 Score=98.38 Aligned_cols=109 Identities=13% Similarity=0.171 Sum_probs=67.3
Q ss_pred CCccEEEecCCCCcHH--HHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC
Q 001306 82 NGVPVLFIPGNAGSYK--QVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE 159 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYk--QvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE 159 (1104)
+.-+||++||+.|++. .++.++..+.+ .++++++.|+.+-
T Consensus 57 ~~p~vll~HG~~g~~~~~~~~~~~~~l~~--------------------------------------~G~~v~~~d~rG~ 98 (324)
T PRK10985 57 HKPRLVLFHGLEGSFNSPYAHGLLEAAQK--------------------------------------RGWLGVVMHFRGC 98 (324)
T ss_pred CCCEEEEeCCCCCCCcCHHHHHHHHHHHH--------------------------------------CCCEEEEEeCCCC
Confidence 3457899999998743 36666664322 2568888888873
Q ss_pred -CCCcch--hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCccccccc
Q 001306 160 -HSAMDG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVE 235 (1104)
Q Consensus 160 -~SAf~G--~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~ 235 (1104)
.+.... ..-..+.+-+.+++++|.+.+. ..++++|||||||.++..++. .++ ...+.
T Consensus 99 g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~-----------------~~~~~~vG~S~GG~i~~~~~~~~~~--~~~~~ 159 (324)
T PRK10985 99 SGEPNRLHRIYHSGETEDARFFLRWLQREFG-----------------HVPTAAVGYSLGGNMLACLLAKEGD--DLPLD 159 (324)
T ss_pred CCCccCCcceECCCchHHHHHHHHHHHHhCC-----------------CCCEEEEEecchHHHHHHHHHhhCC--CCCcc
Confidence 221100 0001123345566677755442 357999999999987666554 321 22489
Q ss_pred EEEEecCCCCCC
Q 001306 236 TVLTLSSPHQSP 247 (1104)
Q Consensus 236 ~IITLsTPH~~p 247 (1104)
++|++++|+...
T Consensus 160 ~~v~i~~p~~~~ 171 (324)
T PRK10985 160 AAVIVSAPLMLE 171 (324)
T ss_pred EEEEEcCCCCHH
Confidence 999999988643
No 42
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.38 E-value=1.2e-06 Score=104.86 Aligned_cols=125 Identities=14% Similarity=0.205 Sum_probs=83.5
Q ss_pred CCCceEEEEeeCCcccchhHhhcccCCccEEEecCCCCcHHHH-----HHHHHHHHHHhcCCCCcchhhhhhhhccccCC
Q 001306 57 SARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQV-----RSLAAESDRAYQGGPLEHSFYQEASLTLEEGG 131 (1104)
Q Consensus 57 a~kY~LYlYrEg~~~~~~~~~~~~l~GvPVLFIPGNAGSYkQv-----RSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~ 131 (1104)
.....|+.|... ..+....|||+|||-...|--. ||+...+.+
T Consensus 171 ~~~~eLi~Y~P~---------t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~----------------------- 218 (532)
T TIGR01838 171 NELFQLIQYEPT---------TETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVE----------------------- 218 (532)
T ss_pred CCcEEEEEeCCC---------CCcCCCCcEEEECcccccceeeecccchHHHHHHHH-----------------------
Confidence 467899999432 1235689999999987666544 455554321
Q ss_pred ccccccccccccccccceeEEEEeCCCCCCCcchhhHHHHHH-HHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEE
Q 001306 132 VNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMDGQILEEHAE-YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVIL 210 (1104)
Q Consensus 132 ~~~e~~~~~~~~~~~~~lD~FaVDFnEE~SAf~G~tL~dQAe-yVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViL 210 (1104)
.++++|++|+.+-..+....++.+.++ .+.++|+.|++... .+++++
T Consensus 219 ---------------qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g-----------------~~kv~l 266 (532)
T TIGR01838 219 ---------------QGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITG-----------------EKQVNC 266 (532)
T ss_pred ---------------CCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcC-----------------CCCeEE
Confidence 267999999998433333345667664 57788888865432 468999
Q ss_pred EEEchhHHHHHHHHh-CCCcc-cccccEEEEecCCCC
Q 001306 211 VGHSVGGFVARAAII-HPLLR-KSAVETVLTLSSPHQ 245 (1104)
Q Consensus 211 VGHSMGGiVAr~~l~-~P~~~-~~~V~~IITLsTPH~ 245 (1104)
|||||||.++-.++. +.... ++.|+++++++||..
T Consensus 267 vG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 267 VGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred EEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 999999998532111 11111 457999999999865
No 43
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=98.35 E-value=3.3e-06 Score=97.46 Aligned_cols=102 Identities=19% Similarity=0.220 Sum_probs=63.8
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
++.||||+||.+++...+...+..+.+ +++++++|+.+ +.
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~---------------------------------------~~~vi~~D~rG~G~ 144 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALAS---------------------------------------RFRVIAIDQLGWGG 144 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHh---------------------------------------CCEEEEECCCCCCC
Confidence 567999999999987776654443221 35789999987 33
Q ss_pred CCcch---hhHHHHHH-HHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccE
Q 001306 161 SAMDG---QILEEHAE-YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (1104)
Q Consensus 161 SAf~G---~tL~dQAe-yVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~ 236 (1104)
|.-.. ...++-.+ ++.++.+++..+ ..++++|+||||||.+|..++.. + ++.|++
T Consensus 145 S~~~~~~~~~~~~~~~~~~~~i~~~~~~l------------------~~~~~~lvGhS~GG~la~~~a~~--~-p~~v~~ 203 (402)
T PLN02894 145 SSRPDFTCKSTEETEAWFIDSFEEWRKAK------------------NLSNFILLGHSFGGYVAAKYALK--H-PEHVQH 203 (402)
T ss_pred CCCCCcccccHHHHHHHHHHHHHHHHHHc------------------CCCCeEEEEECHHHHHHHHHHHh--C-chhhcE
Confidence 32111 12222222 343333333111 14579999999999999987652 2 456999
Q ss_pred EEEecCC
Q 001306 237 VLTLSSP 243 (1104)
Q Consensus 237 IITLsTP 243 (1104)
+|.++++
T Consensus 204 lvl~~p~ 210 (402)
T PLN02894 204 LILVGPA 210 (402)
T ss_pred EEEECCc
Confidence 9988743
No 44
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.32 E-value=7.7e-06 Score=89.20 Aligned_cols=105 Identities=17% Similarity=0.093 Sum_probs=70.3
Q ss_pred CccEEEecCCC----CcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC
Q 001306 83 GVPVLFIPGNA----GSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG 158 (1104)
Q Consensus 83 GvPVLFIPGNA----GSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE 158 (1104)
+-+||+|||.. |++++...+|..+++ .+++++++|+.+
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~--------------------------------------~G~~v~~~Dl~G 67 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAE--------------------------------------AGFPVLRFDYRG 67 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHH--------------------------------------CCCEEEEeCCCC
Confidence 45788887643 788877666765432 257899999998
Q ss_pred CC-CCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEE
Q 001306 159 EH-SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (1104)
Q Consensus 159 E~-SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~I 237 (1104)
-. |.-.-..+.+..+-+.++++++.+.+. ..++++++||||||.+|..++..+ ..|+++
T Consensus 68 ~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~----------------g~~~i~l~G~S~Gg~~a~~~a~~~----~~v~~l 127 (274)
T TIGR03100 68 MGDSEGENLGFEGIDADIAAAIDAFREAAP----------------HLRRIVAWGLCDAASAALLYAPAD----LRVAGL 127 (274)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHhhCC----------------CCCcEEEEEECHHHHHHHHHhhhC----CCccEE
Confidence 33 321113455555666677776643221 135799999999999999886532 469999
Q ss_pred EEecCCCC
Q 001306 238 LTLSSPHQ 245 (1104)
Q Consensus 238 ITLsTPH~ 245 (1104)
|+++++..
T Consensus 128 il~~p~~~ 135 (274)
T TIGR03100 128 VLLNPWVR 135 (274)
T ss_pred EEECCccC
Confidence 99986644
No 45
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.30 E-value=1.5e-06 Score=97.57 Aligned_cols=76 Identities=16% Similarity=0.184 Sum_probs=56.0
Q ss_pred cceeEEEEeCCC--CCC-Cc--------------chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCce-E
Q 001306 147 RRLDWFAVDLEG--EHS-AM--------------DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKS-V 208 (1104)
Q Consensus 147 ~~lD~FaVDFnE--E~S-Af--------------~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~s-V 208 (1104)
.++.+++.|+.+ ..+ .- ...+++++++.+.+.++.+ . .++ +
T Consensus 71 ~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~-----------------~~~~~ 129 (351)
T TIGR01392 71 DRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL----G-----------------IEQIA 129 (351)
T ss_pred CceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc----C-----------------CCCce
Confidence 468999999998 222 11 1257889888887777653 1 345 9
Q ss_pred EEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCC
Q 001306 209 ILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 209 iLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~ 246 (1104)
++|||||||.+|+.++.. + ++.|+++|.++++...
T Consensus 130 ~l~G~S~Gg~ia~~~a~~--~-p~~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 130 AVVGGSMGGMQALEWAID--Y-PERVRAIVVLATSARH 164 (351)
T ss_pred EEEEECHHHHHHHHHHHH--C-hHhhheEEEEccCCcC
Confidence 999999999999997652 2 4679999999986654
No 46
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.29 E-value=3.9e-06 Score=111.86 Aligned_cols=98 Identities=24% Similarity=0.326 Sum_probs=72.4
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EH 160 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~ 160 (1104)
.+-|||||||..|+.++|+.++..+.+ +++++++|+++ +.
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~---------------------------------------~~rVi~~Dl~G~G~ 1410 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG---------------------------------------SARCISIDLPGHGG 1410 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC---------------------------------------CCEEEEEcCCCCCC
Confidence 456999999999999999988775321 24788888887 33
Q ss_pred CCcc----------hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcc
Q 001306 161 SAMD----------GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLR 230 (1104)
Q Consensus 161 SAf~----------G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~ 230 (1104)
|... ..+++++++.+.+.++.+ . .++++||||||||.+|..++. .+
T Consensus 1411 S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l----~-----------------~~~v~LvGhSmGG~iAl~~A~--~~- 1466 (1655)
T PLN02980 1411 SKIQNHAKETQTEPTLSVELVADLLYKLIEHI----T-----------------PGKVTLVGYSMGARIALYMAL--RF- 1466 (1655)
T ss_pred CCCccccccccccccCCHHHHHHHHHHHHHHh----C-----------------CCCEEEEEECHHHHHHHHHHH--hC-
Confidence 3221 235788888777666543 1 458999999999999999775 22
Q ss_pred cccccEEEEecC
Q 001306 231 KSAVETVLTLSS 242 (1104)
Q Consensus 231 ~~~V~~IITLsT 242 (1104)
++.|+++|.+++
T Consensus 1467 P~~V~~lVlis~ 1478 (1655)
T PLN02980 1467 SDKIEGAVIISG 1478 (1655)
T ss_pred hHhhCEEEEECC
Confidence 456999999875
No 47
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.28 E-value=1.8e-06 Score=92.90 Aligned_cols=114 Identities=24% Similarity=0.265 Sum_probs=62.9
Q ss_pred ccEEEecCCCC-cHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCC-
Q 001306 84 VPVLFIPGNAG-SYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS- 161 (1104)
Q Consensus 84 vPVLFIPGNAG-SYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~S- 161 (1104)
.||+||||+.| .+.-|..++..+.+. +-..-++|+.++.....
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~-----------------------------------GY~~~~vya~tyg~~~~~ 46 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAA-----------------------------------GYCDSEVYALTYGSGNGS 46 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHT-----------------------------------T--CCCEEEE--S-CCHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHc-----------------------------------CCCcceeEeccCCCCCCC
Confidence 59999999998 778888888764321 01112589999986443
Q ss_pred -Ccch-hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCc----------
Q 001306 162 -AMDG-QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLL---------- 229 (1104)
Q Consensus 162 -Af~G-~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~---------- 229 (1104)
.... ....+.++-+.+.|+.+++.-. . +|-||||||||.+||.++.--+-
T Consensus 47 ~~~~~~~~~~~~~~~l~~fI~~Vl~~TG-----------------a-kVDIVgHS~G~~iaR~yi~~~~~~d~~~~lg~~ 108 (219)
T PF01674_consen 47 PSVQNAHMSCESAKQLRAFIDAVLAYTG-----------------A-KVDIVGHSMGGTIARYYIKGGGGADKVVNLGPP 108 (219)
T ss_dssp THHHHHHB-HHHHHHHHHHHHHHHHHHT--------------------EEEEEETCHHHHHHHHHHHCTGGGTEEE----
T ss_pred CcccccccchhhHHHHHHHHHHHHHhhC-----------------C-EEEEEEcCCcCHHHHHHHHHcCCCCcccCcccc
Confidence 2221 2133445556666666643211 4 89999999999999999862110
Q ss_pred ccccccEEEEecCCCCCCCcc
Q 001306 230 RKSAVETVLTLSSPHQSPPLA 250 (1104)
Q Consensus 230 ~~~~V~~IITLsTPH~~pPva 250 (1104)
..+.|.+.|.++.|..+-...
T Consensus 109 ~~~~v~t~v~lag~n~G~~~~ 129 (219)
T PF01674_consen 109 LTSKVGTFVGLAGANHGLTSC 129 (219)
T ss_dssp GGG-EEEEEEES--TT--CGH
T ss_pred ccccccccccccccccccccc
Confidence 135688889998777765443
No 48
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.26 E-value=2e-06 Score=97.19 Aligned_cols=106 Identities=29% Similarity=0.345 Sum_probs=67.7
Q ss_pred cCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCC
Q 001306 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (1104)
Q Consensus 81 l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~ 160 (1104)
..+-|||+|||.++|-.+||.....+.+ . .++.++|+||.|..
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~-----------------------------------~--~~~~v~aiDl~G~g 98 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSK-----------------------------------A--KGLRVLAIDLPGHG 98 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhcccccc-----------------------------------c--cceEEEEEecCCCC
Confidence 5788999999999999999866553221 1 15789999999944
Q ss_pred -CCcch-hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEE
Q 001306 161 -SAMDG-QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (1104)
Q Consensus 161 -SAf~G-~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~II 238 (1104)
+.-.. ....+-.+++ +.|+.+...|. -+++++|||||||+||-.++.. | ++.|+.+|
T Consensus 99 ~~s~~~~~~~y~~~~~v-~~i~~~~~~~~-----------------~~~~~lvghS~Gg~va~~~Aa~--~-P~~V~~lv 157 (326)
T KOG1454|consen 99 YSSPLPRGPLYTLRELV-ELIRRFVKEVF-----------------VEPVSLVGHSLGGIVALKAAAY--Y-PETVDSLV 157 (326)
T ss_pred cCCCCCCCCceehhHHH-HHHHHHHHhhc-----------------CcceEEEEeCcHHHHHHHHHHh--C-ccccccee
Confidence 32222 1222222222 23333332322 3469999999999999997752 2 45699999
Q ss_pred ---EecCCC
Q 001306 239 ---TLSSPH 244 (1104)
Q Consensus 239 ---TLsTPH 244 (1104)
.+++|-
T Consensus 158 ~~~~~~~~~ 166 (326)
T KOG1454|consen 158 LLDLLGPPV 166 (326)
T ss_pred eeccccccc
Confidence 555333
No 49
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.16 E-value=3.2e-06 Score=92.85 Aligned_cols=74 Identities=14% Similarity=0.018 Sum_probs=50.7
Q ss_pred ceeEEEEeCCC-CCCCcc----hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHH
Q 001306 148 RLDWFAVDLEG-EHSAMD----GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARA 222 (1104)
Q Consensus 148 ~lD~FaVDFnE-E~SAf~----G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~ 222 (1104)
+++++++|+.+ +.|... +.++.+.++.+...++.+ + .+++++|||||||.+|..
T Consensus 53 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l----~-----------------~~~~~lvG~S~GG~ia~~ 111 (306)
T TIGR01249 53 TYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL----G-----------------IKNWLVFGGSWGSTLALA 111 (306)
T ss_pred CCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----C-----------------CCCEEEEEECHHHHHHHH
Confidence 47999999998 444321 234566665554444332 2 357999999999999999
Q ss_pred HHhCCCcccccccEEEEecCCCC
Q 001306 223 AIIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 223 ~l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
++.. + ++.|+++|++++...
T Consensus 112 ~a~~--~-p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 112 YAQT--H-PEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHH--C-hHhhhhheeeccccC
Confidence 7752 2 456999999986554
No 50
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.15 E-value=5.9e-06 Score=94.26 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=54.6
Q ss_pred cceeEEEEeCCC--CCC-Cc---------------chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCce-
Q 001306 147 RRLDWFAVDLEG--EHS-AM---------------DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKS- 207 (1104)
Q Consensus 147 ~~lD~FaVDFnE--E~S-Af---------------~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~s- 207 (1104)
.++.++++|+.+ ..| .- ...++.++++.+.+.++.+ . .++
T Consensus 90 ~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----~-----------------~~~~ 148 (379)
T PRK00175 90 DRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDAL----G-----------------ITRL 148 (379)
T ss_pred cceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHh----C-----------------CCCc
Confidence 367999999887 222 10 1347999888888777764 1 345
Q ss_pred EEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCC
Q 001306 208 VILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 208 ViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
+++|||||||.+|..++.. + ++.|+++|.++++..
T Consensus 149 ~~lvG~S~Gg~ia~~~a~~--~-p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 149 AAVVGGSMGGMQALEWAID--Y-PDRVRSALVIASSAR 183 (379)
T ss_pred eEEEEECHHHHHHHHHHHh--C-hHhhhEEEEECCCcc
Confidence 5999999999999987652 2 456999999997654
No 51
>PLN02511 hydrolase
Probab=98.10 E-value=1e-05 Score=92.92 Aligned_cols=106 Identities=12% Similarity=0.222 Sum_probs=70.1
Q ss_pred CccEEEecCCCCcHH--HHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-C
Q 001306 83 GVPVLFIPGNAGSYK--QVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-E 159 (1104)
Q Consensus 83 GvPVLFIPGNAGSYk--QvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E 159 (1104)
+-+||++||..|+.+ .++.++..+.+ .+++++++|+.+ +
T Consensus 100 ~p~vvllHG~~g~s~~~y~~~~~~~~~~--------------------------------------~g~~vv~~d~rG~G 141 (388)
T PLN02511 100 APVLILLPGLTGGSDDSYVRHMLLRARS--------------------------------------KGWRVVVFNSRGCA 141 (388)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHH--------------------------------------CCCEEEEEecCCCC
Confidence 345999999987643 35666654321 256889999988 3
Q ss_pred CCCcch--hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccE
Q 001306 160 HSAMDG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVET 236 (1104)
Q Consensus 160 ~SAf~G--~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~ 236 (1104)
.|.... ......++-+.++|+++...|. ..++++|||||||.++..++. +|+ ...|.+
T Consensus 142 ~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~-----------------~~~~~lvG~SlGg~i~~~yl~~~~~--~~~v~~ 202 (388)
T PLN02511 142 DSPVTTPQFYSASFTGDLRQVVDHVAGRYP-----------------SANLYAAGWSLGANILVNYLGEEGE--NCPLSG 202 (388)
T ss_pred CCCCCCcCEEcCCchHHHHHHHHHHHHHCC-----------------CCCEEEEEechhHHHHHHHHHhcCC--CCCceE
Confidence 332211 1123456667777888765553 247999999999999888764 443 123889
Q ss_pred EEEecCCCC
Q 001306 237 VLTLSSPHQ 245 (1104)
Q Consensus 237 IITLsTPH~ 245 (1104)
.+.++.|..
T Consensus 203 ~v~is~p~~ 211 (388)
T PLN02511 203 AVSLCNPFD 211 (388)
T ss_pred EEEECCCcC
Confidence 999987764
No 52
>COG1647 Esterase/lipase [General function prediction only]
Probab=98.06 E-value=1.5e-05 Score=85.98 Aligned_cols=104 Identities=20% Similarity=0.300 Sum_probs=69.5
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~S 161 (1104)
.+.-||+|||+.||-+.||-||+.+.++ +++++|..++|...
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~--------------------------------------GyTv~aP~ypGHG~ 55 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNEN--------------------------------------GYTVYAPRYPGHGT 55 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHC--------------------------------------CceEecCCCCCCCC
Confidence 4478999999999999999999986432 45666666666322
Q ss_pred C---cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEE
Q 001306 162 A---MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVL 238 (1104)
Q Consensus 162 A---f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~II 238 (1104)
- |--.+-.| -++...+.|.+-... .-++|.++|-||||+.|.-++.+ | .+++||
T Consensus 56 ~~e~fl~t~~~D-------W~~~v~d~Y~~L~~~-----------gy~eI~v~GlSmGGv~alkla~~--~---p~K~iv 112 (243)
T COG1647 56 LPEDFLKTTPRD-------WWEDVEDGYRDLKEA-----------GYDEIAVVGLSMGGVFALKLAYH--Y---PPKKIV 112 (243)
T ss_pred CHHHHhcCCHHH-------HHHHHHHHHHHHHHc-----------CCCeEEEEeecchhHHHHHHHhh--C---Ccccee
Confidence 1 11122233 333444444321000 03589999999999999997762 2 179999
Q ss_pred EecCCCCC
Q 001306 239 TLSSPHQS 246 (1104)
Q Consensus 239 TLsTPH~~ 246 (1104)
+|++|-+.
T Consensus 113 ~m~a~~~~ 120 (243)
T COG1647 113 PMCAPVNV 120 (243)
T ss_pred eecCCccc
Confidence 99988873
No 53
>PLN02872 triacylglycerol lipase
Probab=98.01 E-value=4.3e-06 Score=96.90 Aligned_cols=125 Identities=22% Similarity=0.240 Sum_probs=80.1
Q ss_pred CCCCceEEEEeeCCcccchhHhhcccCCccEEEecCCCCcHHHH------HHHHHHHHHHhcCCCCcchhhhhhhhcccc
Q 001306 56 SSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQV------RSLAAESDRAYQGGPLEHSFYQEASLTLEE 129 (1104)
Q Consensus 56 ~a~kY~LYlYrEg~~~~~~~~~~~~l~GvPVLFIPGNAGSYkQv------RSLAs~a~r~y~~~~~~~~~~~~~~l~p~~ 129 (1104)
....|-|-++|=.... +.....++-||||+||..+|-..| +++|..+++
T Consensus 51 T~DGy~L~l~ri~~~~----~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~--------------------- 105 (395)
T PLN02872 51 TKDGYLLALQRVSSRN----PRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD--------------------- 105 (395)
T ss_pred CCCCcEEEEEEcCCCC----CCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh---------------------
Confidence 3556888887631100 001112467999999998776655 455554332
Q ss_pred CCccccccccccccccccceeEEEEeCCCCC------------CCcchhhHHHHH-HHHHHHHHHHHHHcccchhhhhhc
Q 001306 130 GGVNIDASIFHSSNQYTRRLDWFAVDLEGEH------------SAMDGQILEEHA-EYVVYAIHRILDQYRESQDARERE 196 (1104)
Q Consensus 130 ~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~------------SAf~G~tL~dQA-eyVn~aI~~ILslY~~~~~~r~~~ 196 (1104)
.++|+++.|..+-. ..+-.-+..++| +-+.++|++|++.-
T Consensus 106 -----------------~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~---------- 158 (395)
T PLN02872 106 -----------------HGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT---------- 158 (395)
T ss_pred -----------------CCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----------
Confidence 14566666665511 111123577888 67888999986431
Q ss_pred ccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEec
Q 001306 197 GAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 197 ~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLs 241 (1104)
.+++++|||||||.++..++..|++ .+.|+.++.++
T Consensus 159 --------~~~v~~VGhS~Gg~~~~~~~~~p~~-~~~v~~~~~l~ 194 (395)
T PLN02872 159 --------NSKIFIVGHSQGTIMSLAALTQPNV-VEMVEAAALLC 194 (395)
T ss_pred --------CCceEEEEECHHHHHHHHHhhChHH-HHHHHHHHHhc
Confidence 3589999999999999988888876 35688888875
No 54
>PRK11071 esterase YqiA; Provisional
Probab=98.00 E-value=3.4e-05 Score=80.47 Aligned_cols=76 Identities=18% Similarity=0.206 Sum_probs=50.4
Q ss_pred cEEEecCCCCcHHHHHH--HHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCCC
Q 001306 85 PVLFIPGNAGSYKQVRS--LAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (1104)
Q Consensus 85 PVLFIPGNAGSYkQvRS--LAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~SA 162 (1104)
|||||||..||.+.++. ++..+.+. ..++.+++.|+++.
T Consensus 3 ~illlHGf~ss~~~~~~~~~~~~l~~~------------------------------------~~~~~v~~~dl~g~--- 43 (190)
T PRK11071 3 TLLYLHGFNSSPRSAKATLLKNWLAQH------------------------------------HPDIEMIVPQLPPY--- 43 (190)
T ss_pred eEEEECCCCCCcchHHHHHHHHHHHHh------------------------------------CCCCeEEeCCCCCC---
Confidence 69999999999988874 33332211 12457899999863
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh
Q 001306 163 MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 163 f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~ 225 (1104)
| ++.++.+.+. ++.+. .+++++|||||||.+|..++.
T Consensus 44 --~---~~~~~~l~~l----~~~~~-----------------~~~~~lvG~S~Gg~~a~~~a~ 80 (190)
T PRK11071 44 --P---ADAAELLESL----VLEHG-----------------GDPLGLVGSSLGGYYATWLSQ 80 (190)
T ss_pred --H---HHHHHHHHHH----HHHcC-----------------CCCeEEEEECHHHHHHHHHHH
Confidence 2 2333333333 32222 357999999999999999775
No 55
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.99 E-value=3.3e-05 Score=84.63 Aligned_cols=116 Identities=20% Similarity=0.266 Sum_probs=74.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh----CCCcccccccEEEEec
Q 001306 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII----HPLLRKSAVETVLTLS 241 (1104)
Q Consensus 166 ~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~----~P~~~~~~V~~IITLs 241 (1104)
.++.+|+.++..++.++.+.|. .+.+..|||||||.-+-.++. ...+ ..++.+|.|+
T Consensus 113 ~s~~~~s~wlk~~msyL~~~Y~-----------------i~k~n~VGhSmGg~~~~~Y~~~yg~dks~--P~lnK~V~l~ 173 (288)
T COG4814 113 ASGLDQSKWLKKAMSYLQKHYN-----------------IPKFNAVGHSMGGLGLTYYMIDYGDDKSL--PPLNKLVSLA 173 (288)
T ss_pred CchhhHHHHHHHHHHHHHHhcC-----------------CceeeeeeeccccHHHHHHHHHhcCCCCC--cchhheEEec
Confidence 4678999999999999999996 678999999999977766654 1222 2489999999
Q ss_pred CCCCCCCcccCcchHHH--------HHHHHHHHHhcccCCCCCCCccccCCCCCcceEEEEecCCCCccccCCCccccCC
Q 001306 242 SPHQSPPLALQPSLGNY--------FARVNDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIESLDGI 313 (1104)
Q Consensus 242 TPH~~pPvafD~~l~~f--------Y~~vn~~W~~~~~~~~s~~~~~~~~~~l~~V~LVSIaGG~rD~~VPsdlTsl~~l 313 (1104)
.|....-+.-|-...++ =...-++|.+.+... -.++-++-|+|-..| .+.-|+.
T Consensus 174 gpfN~~~l~~de~v~~v~~~~~~~~~t~y~~y~~~n~k~v------------~~~~evl~IaGDl~d------g~~tDG~ 235 (288)
T COG4814 174 GPFNVGNLVPDETVTDVLKDGPGLIKTPYYDYIAKNYKKV------------SPNTEVLLIAGDLDD------GKQTDGA 235 (288)
T ss_pred ccccccccCCCcchheeeccCccccCcHHHHHHHhcceeC------------CCCcEEEEEeccccc------CCcCCCc
Confidence 99983222222222111 011125666554321 126778999887655 2333455
Q ss_pred CCCCc
Q 001306 314 VPPTH 318 (1104)
Q Consensus 314 vP~t~ 318 (1104)
||+..
T Consensus 236 Vp~as 240 (288)
T COG4814 236 VPWAS 240 (288)
T ss_pred eechH
Confidence 66544
No 56
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.97 E-value=1.5e-05 Score=90.41 Aligned_cols=112 Identities=25% Similarity=0.346 Sum_probs=73.1
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~S 161 (1104)
.--|++||||-.+++.|+-++.-...+. +-..-+++++++.+...
T Consensus 58 ~~~pivlVhG~~~~~~~~~~~~~~~~~~-----------------------------------g~~~~~~~~~~~~~~~~ 102 (336)
T COG1075 58 AKEPIVLVHGLGGGYGNFLPLDYRLAIL-----------------------------------GWLTNGVYAFELSGGDG 102 (336)
T ss_pred CCceEEEEccCcCCcchhhhhhhhhcch-----------------------------------HHHhcccccccccccCC
Confidence 3459999999999999998888752211 00112566667665422
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEe
Q 001306 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTL 240 (1104)
Q Consensus 162 Af~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITL 240 (1104)
.-. +..-++-+..-|..++.... .+++.||||||||.++|.++. .+. .+.|+.++|+
T Consensus 103 ~~~---~~~~~~ql~~~V~~~l~~~g-----------------a~~v~LigHS~GG~~~ry~~~~~~~--~~~V~~~~tl 160 (336)
T COG1075 103 TYS---LAVRGEQLFAYVDEVLAKTG-----------------AKKVNLIGHSMGGLDSRYYLGVLGG--ANRVASVVTL 160 (336)
T ss_pred Ccc---ccccHHHHHHHHHHHHhhcC-----------------CCceEEEeecccchhhHHHHhhcCc--cceEEEEEEe
Confidence 222 22222333334444443322 368999999999999997765 332 3789999999
Q ss_pred cCCCCCCCcc
Q 001306 241 SSPHQSPPLA 250 (1104)
Q Consensus 241 sTPH~~pPva 250 (1104)
+|||.+....
T Consensus 161 ~tp~~Gt~~~ 170 (336)
T COG1075 161 GTPHHGTELA 170 (336)
T ss_pred ccCCCCchhh
Confidence 9999997644
No 57
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.97 E-value=1.2e-05 Score=94.62 Aligned_cols=46 Identities=24% Similarity=0.440 Sum_probs=38.2
Q ss_pred CceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCCCCCCCcc
Q 001306 205 PKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQSPPLA 250 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTPH~~pPva 250 (1104)
.++|+||||||||.+|+.++. +|+.....|+.+|++|||+.++|-+
T Consensus 161 ~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~Gs~~~ 207 (440)
T PLN02733 161 GKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQGAPGF 207 (440)
T ss_pred CCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCCCchh
Confidence 468999999999999999764 5654456799999999999998743
No 58
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.96 E-value=4.7e-05 Score=85.10 Aligned_cols=102 Identities=24% Similarity=0.334 Sum_probs=68.0
Q ss_pred ccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-CCC
Q 001306 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE-HSA 162 (1104)
Q Consensus 84 vPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE-~SA 162 (1104)
--|+.+||-++...=..-++..+. ..++++|+.|..+. .|.
T Consensus 35 g~Vvl~HG~~Eh~~ry~~la~~l~--------------------------------------~~G~~V~~~D~RGhG~S~ 76 (298)
T COG2267 35 GVVVLVHGLGEHSGRYEELADDLA--------------------------------------ARGFDVYALDLRGHGRSP 76 (298)
T ss_pred cEEEEecCchHHHHHHHHHHHHHH--------------------------------------hCCCEEEEecCCCCCCCC
Confidence 358889999888766666665432 24789999999994 553
Q ss_pred --cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEe
Q 001306 163 --MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (1104)
Q Consensus 163 --f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITL 240 (1104)
-.|. ..+-++|+.+.-..+..... ..+..+++|+||||||.||..++.. + +..|+++|..
T Consensus 77 r~~rg~-~~~f~~~~~dl~~~~~~~~~--------------~~~~~p~~l~gHSmGg~Ia~~~~~~--~-~~~i~~~vLs 138 (298)
T COG2267 77 RGQRGH-VDSFADYVDDLDAFVETIAE--------------PDPGLPVFLLGHSMGGLIALLYLAR--Y-PPRIDGLVLS 138 (298)
T ss_pred CCCcCC-chhHHHHHHHHHHHHHHHhc--------------cCCCCCeEEEEeCcHHHHHHHHHHh--C-CccccEEEEE
Confidence 4443 33355565555444422211 1235789999999999999998862 2 2568888877
Q ss_pred c
Q 001306 241 S 241 (1104)
Q Consensus 241 s 241 (1104)
|
T Consensus 139 s 139 (298)
T COG2267 139 S 139 (298)
T ss_pred C
Confidence 6
No 59
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.95 E-value=0.00012 Score=76.77 Aligned_cols=56 Identities=18% Similarity=0.145 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCCCC
Q 001306 171 HAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 171 QAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTPH~ 245 (1104)
..+.+.+.|+++.+.|. .+++++.|+||||||.+|..++. +| +.+.+++.++.+..
T Consensus 75 ~~~~~~~~i~~~~~~~~---------------id~~~i~l~G~S~Gg~~a~~~a~~~p----~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 75 EVESLHQLIDAVKANYS---------------IDPNRVYVTGLSAGGGMTAVLGCTYP----DVFAGGASNAGLPY 131 (212)
T ss_pred cHHHHHHHHHHHHHhcC---------------cChhheEEEEECHHHHHHHHHHHhCc----hhheEEEeecCCcc
Confidence 45566777787765553 23578999999999999988664 44 45888888886643
No 60
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.95 E-value=4.5e-05 Score=91.74 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=62.5
Q ss_pred cceeEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHH---
Q 001306 147 RRLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAA--- 223 (1104)
Q Consensus 147 ~~lD~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~--- 223 (1104)
.++++|.||-.+-..+...-+|+|..+++.+||+.|.+.-. .++|.++||||||.++.++
T Consensus 246 qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG-----------------~~~vnl~GyC~GGtl~a~~~a~ 308 (560)
T TIGR01839 246 NQLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITG-----------------SRDLNLLGACAGGLTCAALVGH 308 (560)
T ss_pred cCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcC-----------------CCCeeEEEECcchHHHHHHHHH
Confidence 37899999988754444446799999999999999975532 4689999999999888863
Q ss_pred -HhCCCcccccccEEEEecCCCCC
Q 001306 224 -IIHPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 224 -l~~P~~~~~~V~~IITLsTPH~~ 246 (1104)
... ...+.|+.+++++||.+.
T Consensus 309 ~aA~--~~~~~V~sltllatplDf 330 (560)
T TIGR01839 309 LQAL--GQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred HHhc--CCCCceeeEEeeeccccc
Confidence 221 112479999999999884
No 61
>PRK10566 esterase; Provisional
Probab=97.95 E-value=6.5e-05 Score=79.17 Aligned_cols=90 Identities=17% Similarity=0.105 Sum_probs=56.4
Q ss_pred CccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCCC
Q 001306 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSA 162 (1104)
Q Consensus 83 GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~SA 162 (1104)
+-.|||+||+.|+-.+++.++..+.+ +++.++++|+.+....
T Consensus 27 ~p~vv~~HG~~~~~~~~~~~~~~l~~--------------------------------------~G~~v~~~d~~g~G~~ 68 (249)
T PRK10566 27 LPTVFFYHGFTSSKLVYSYFAVALAQ--------------------------------------AGFRVIMPDAPMHGAR 68 (249)
T ss_pred CCEEEEeCCCCcccchHHHHHHHHHh--------------------------------------CCCEEEEecCCccccc
Confidence 45789999999887777666664321 2568888888763221
Q ss_pred cch---hhH-------HHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh
Q 001306 163 MDG---QIL-------EEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 163 f~G---~tL-------~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~ 225 (1104)
..| ..+ .+..+-+.++++++.+.. ..+++++.++||||||.+|..++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---------------~~~~~~i~v~G~S~Gg~~al~~~~ 126 (249)
T PRK10566 69 FSGDEARRLNHFWQILLQNMQEFPTLRAAIREEG---------------WLLDDRLAVGGASMGGMTALGIMA 126 (249)
T ss_pred CCCccccchhhHHHHHHHHHHHHHHHHHHHHhcC---------------CcCccceeEEeecccHHHHHHHHH
Confidence 111 111 223344445555553221 123679999999999999998775
No 62
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.94 E-value=3.6e-05 Score=77.89 Aligned_cols=71 Identities=27% Similarity=0.360 Sum_probs=54.0
Q ss_pred eeEEEEeCCC-CCC------CcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHH
Q 001306 149 LDWFAVDLEG-EHS------AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVAR 221 (1104)
Q Consensus 149 lD~FaVDFnE-E~S------Af~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr 221 (1104)
||++++|..+ +.| .+..-+..+.++.+...++.. . .+++++|||||||.++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l----~-----------------~~~~~~vG~S~Gg~~~~ 59 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL----G-----------------IKKINLVGHSMGGMLAL 59 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH----T-----------------TSSEEEEEETHHHHHHH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh----C-----------------CCCeEEEEECCChHHHH
Confidence 5899999998 222 355677888888776666543 2 34599999999999999
Q ss_pred HHHh-CCCcccccccEEEEecCCC
Q 001306 222 AAII-HPLLRKSAVETVLTLSSPH 244 (1104)
Q Consensus 222 ~~l~-~P~~~~~~V~~IITLsTPH 244 (1104)
.++. +| +.|+++|++++|.
T Consensus 60 ~~a~~~p----~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 60 EYAAQYP----ERVKKLVLISPPP 79 (230)
T ss_dssp HHHHHSG----GGEEEEEEESESS
T ss_pred HHHHHCc----hhhcCcEEEeeec
Confidence 9775 44 4799999999774
No 63
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.93 E-value=6.1e-05 Score=83.13 Aligned_cols=77 Identities=18% Similarity=0.141 Sum_probs=50.5
Q ss_pred ceeEEEEeCCCCCCCcch---hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH
Q 001306 148 RLDWFAVDLEGEHSAMDG---QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI 224 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G---~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l 224 (1104)
++.++++|+.+..+..+. ..+...++.+.+.|+.+.+.+. ..++++++|||||||.||..+.
T Consensus 66 ~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g---------------~~~~~i~lIGhSlGa~vAg~~a 130 (275)
T cd00707 66 DYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTG---------------LSLENVHLIGHSLGAHVAGFAG 130 (275)
T ss_pred CCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcC---------------CChHHEEEEEecHHHHHHHHHH
Confidence 468999999874222111 1233344556666666643321 1257899999999999999987
Q ss_pred hCCCcccccccEEEEecC
Q 001306 225 IHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 225 ~~P~~~~~~V~~IITLsT 242 (1104)
.. + +++|++|+.|.+
T Consensus 131 ~~--~-~~~v~~iv~LDP 145 (275)
T cd00707 131 KR--L-NGKLGRITGLDP 145 (275)
T ss_pred HH--h-cCccceeEEecC
Confidence 52 2 347999999973
No 64
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.92 E-value=7.6e-05 Score=87.93 Aligned_cols=77 Identities=18% Similarity=0.126 Sum_probs=53.6
Q ss_pred ceeEEEEeCCCCCCCcch---hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH
Q 001306 148 RLDWFAVDLEGEHSAMDG---QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI 224 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G---~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l 224 (1104)
+++++++|..+.....+. ......++.+.+.|+++.+.+. -+.++|+||||||||.||-.+.
T Consensus 73 d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~g---------------l~l~~VhLIGHSLGAhIAg~ag 137 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFN---------------YPWDNVHLLGYSLGAHVAGIAG 137 (442)
T ss_pred CCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhC---------------CCCCcEEEEEECHHHHHHHHHH
Confidence 368999999974332221 2235566677777777654432 1257899999999999999977
Q ss_pred hCCCcccccccEEEEecC
Q 001306 225 IHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 225 ~~P~~~~~~V~~IITLsT 242 (1104)
.. .+++|..|+.|.+
T Consensus 138 ~~---~p~rV~rItgLDP 152 (442)
T TIGR03230 138 SL---TKHKVNRITGLDP 152 (442)
T ss_pred Hh---CCcceeEEEEEcC
Confidence 52 2467999999974
No 65
>PRK13604 luxD acyl transferase; Provisional
Probab=97.85 E-value=0.00017 Score=81.58 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=61.9
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC--
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE-- 159 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE-- 159 (1104)
+-..|++.||.+|.......+|..+.+ .++.++..||.+.
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~--------------------------------------~G~~vLrfD~rg~~G 77 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSS--------------------------------------NGFHVIRYDSLHHVG 77 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHH--------------------------------------CCCEEEEecCCCCCC
Confidence 334688999999985444444443321 2567888887542
Q ss_pred CC-C-cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEE
Q 001306 160 HS-A-MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETV 237 (1104)
Q Consensus 160 ~S-A-f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~I 237 (1104)
.| + +...++....+=+..+|+++.+.. .+++.|+||||||.+|..++..+ .++.+
T Consensus 78 eS~G~~~~~t~s~g~~Dl~aaid~lk~~~------------------~~~I~LiG~SmGgava~~~A~~~-----~v~~l 134 (307)
T PRK13604 78 LSSGTIDEFTMSIGKNSLLTVVDWLNTRG------------------INNLGLIAASLSARIAYEVINEI-----DLSFL 134 (307)
T ss_pred CCCCccccCcccccHHHHHHHHHHHHhcC------------------CCceEEEEECHHHHHHHHHhcCC-----CCCEE
Confidence 23 1 111223334556667788874321 34799999999999996666522 27888
Q ss_pred EEec
Q 001306 238 LTLS 241 (1104)
Q Consensus 238 ITLs 241 (1104)
|+.+
T Consensus 135 I~~s 138 (307)
T PRK13604 135 ITAV 138 (307)
T ss_pred EEcC
Confidence 8776
No 66
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.84 E-value=5.4e-05 Score=86.18 Aligned_cols=73 Identities=29% Similarity=0.417 Sum_probs=46.3
Q ss_pred ceeEEEEeCCC-CCC---CcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHH
Q 001306 148 RLDWFAVDLEG-EHS---AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAA 223 (1104)
Q Consensus 148 ~lD~FaVDFnE-E~S---Af~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~ 223 (1104)
..++||+|+.+ +.| +|.-..-.+.-+|| +.|+.- |.+ ...++.+||||||||++|-.+
T Consensus 116 ~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fv-esiE~W----------R~~-------~~L~KmilvGHSfGGYLaa~Y 177 (365)
T KOG4409|consen 116 IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFV-ESIEQW----------RKK-------MGLEKMILVGHSFGGYLAAKY 177 (365)
T ss_pred cCceEEecccCCCCCCCCCCCCCcccchHHHH-HHHHHH----------HHH-------cCCcceeEeeccchHHHHHHH
Confidence 46899999998 333 34332222222443 333322 111 126799999999999999987
Q ss_pred HhCCCcccccccEEEEec
Q 001306 224 IIHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 224 l~~P~~~~~~V~~IITLs 241 (1104)
+. .| +++|+.+|+.+
T Consensus 178 Al--Ky-PerV~kLiLvs 192 (365)
T KOG4409|consen 178 AL--KY-PERVEKLILVS 192 (365)
T ss_pred HH--hC-hHhhceEEEec
Confidence 64 23 45799999885
No 67
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.83 E-value=0.00013 Score=71.81 Aligned_cols=100 Identities=29% Similarity=0.396 Sum_probs=63.3
Q ss_pred cEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCCCcc
Q 001306 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHSAMD 164 (1104)
Q Consensus 85 PVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~SAf~ 164 (1104)
|++|+||..|++..++........ . ... ++++++|+.+-.....
T Consensus 23 ~i~~~hg~~~~~~~~~~~~~~~~~----------------------------------~-~~~-~~~~~~d~~g~g~s~~ 66 (282)
T COG0596 23 PLVLLHGFPGSSSVWRPVFKVLPA----------------------------------L-AAR-YRVIAPDLRGHGRSDP 66 (282)
T ss_pred eEEEeCCCCCchhhhHHHHHHhhc----------------------------------c-ccc-eEEEEecccCCCCCCc
Confidence 899999999999999982111100 0 012 7999999996322210
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecC
Q 001306 165 -GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 165 -G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsT 242 (1104)
+.....-++. +..+++.+. ..+++++||||||.++..++. .| +.++++|.++.
T Consensus 67 ~~~~~~~~~~~----~~~~~~~~~-----------------~~~~~l~G~S~Gg~~~~~~~~~~p----~~~~~~v~~~~ 121 (282)
T COG0596 67 AGYSLSAYADD----LAALLDALG-----------------LEKVVLVGHSMGGAVALALALRHP----DRVRGLVLIGP 121 (282)
T ss_pred ccccHHHHHHH----HHHHHHHhC-----------------CCceEEEEecccHHHHHHHHHhcc----hhhheeeEecC
Confidence 1111111223 333333322 234999999999999999775 44 47999999997
Q ss_pred CCC
Q 001306 243 PHQ 245 (1104)
Q Consensus 243 PH~ 245 (1104)
+..
T Consensus 122 ~~~ 124 (282)
T COG0596 122 APP 124 (282)
T ss_pred CCC
Confidence 776
No 68
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.79 E-value=0.00019 Score=79.13 Aligned_cols=60 Identities=27% Similarity=0.365 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEec
Q 001306 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLS 241 (1104)
Q Consensus 166 ~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLs 241 (1104)
-+|++|.++.-+.|+.+...+. .+..+++|+|||+|+.+++.++. .+. ....|..++.|=
T Consensus 59 ~sL~~QI~hk~~~i~~~~~~~~---------------~~~~~liLiGHSIGayi~levl~r~~~-~~~~V~~~~lLf 119 (266)
T PF10230_consen 59 FSLQDQIEHKIDFIKELIPQKN---------------KPNVKLILIGHSIGAYIALEVLKRLPD-LKFRVKKVILLF 119 (266)
T ss_pred cCHHHHHHHHHHHHHHHhhhhc---------------CCCCcEEEEeCcHHHHHHHHHHHhccc-cCCceeEEEEeC
Confidence 4799999999999998876542 12468999999999999999885 331 245688888884
No 69
>PRK07581 hypothetical protein; Validated
Probab=97.79 E-value=3e-05 Score=86.24 Aligned_cols=38 Identities=16% Similarity=0.210 Sum_probs=30.1
Q ss_pred Cce-EEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCC
Q 001306 205 PKS-VILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 205 p~s-ViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
.++ ++||||||||.||..++. .| +++|+++|.++|...
T Consensus 122 i~~~~~lvG~S~GG~va~~~a~--~~-P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 122 IERLALVVGWSMGAQQTYHWAV--RY-PDMVERAAPIAGTAK 160 (339)
T ss_pred CCceEEEEEeCHHHHHHHHHHH--HC-HHHHhhheeeecCCC
Confidence 457 589999999999999775 22 467999999987654
No 70
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=97.76 E-value=6.5e-05 Score=78.15 Aligned_cols=103 Identities=21% Similarity=0.271 Sum_probs=70.3
Q ss_pred cEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCC-CCc
Q 001306 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH-SAM 163 (1104)
Q Consensus 85 PVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~-SAf 163 (1104)
||+++||-.|+--.-+.||..+.. + ...+++++.++.. ..-
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~-----------------------------------~---~~~v~~i~~~~~~~~~~ 43 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD-----------------------------------D---VIGVYGIEYPGRGDDEP 43 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT-----------------------------------T---EEEEEEECSTTSCTTSH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC-----------------------------------C---eEEEEEEecCCCCCCCC
Confidence 789999999998888888875321 0 2477888887743 222
Q ss_pred chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCC
Q 001306 164 DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSP 243 (1104)
Q Consensus 164 ~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTP 243 (1104)
.-.++++.|+...+.|+... . ..+++|+|||+||++|..++..-+-....+..|+++.+|
T Consensus 44 ~~~si~~la~~y~~~I~~~~---~-----------------~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~ 103 (229)
T PF00975_consen 44 PPDSIEELASRYAEAIRARQ---P-----------------EGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSP 103 (229)
T ss_dssp EESSHHHHHHHHHHHHHHHT---S-----------------SSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCS
T ss_pred CCCCHHHHHHHHHHHhhhhC---C-----------------CCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCC
Confidence 33678887776655554431 1 128999999999999999775212123458999999976
Q ss_pred CC
Q 001306 244 HQ 245 (1104)
Q Consensus 244 H~ 245 (1104)
..
T Consensus 104 ~p 105 (229)
T PF00975_consen 104 PP 105 (229)
T ss_dssp ST
T ss_pred CC
Confidence 43
No 71
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.75 E-value=5e-05 Score=87.85 Aligned_cols=47 Identities=30% Similarity=0.529 Sum_probs=39.3
Q ss_pred CceEEEEEEchhHHHHHHHHhCC--C-cccccccEEEEecCCCCCCCccc
Q 001306 205 PKSVILVGHSVGGFVARAAIIHP--L-LRKSAVETVLTLSSPHQSPPLAL 251 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P--~-~~~~~V~~IITLsTPH~~pPvaf 251 (1104)
.++|+||||||||.+++.++..- . +....|+++|++|+|+.+++-++
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~~a~ 167 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGGSPKAL 167 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCCChHHH
Confidence 46899999999999999988632 2 44567999999999999988664
No 72
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=97.71 E-value=0.00019 Score=81.28 Aligned_cols=104 Identities=26% Similarity=0.319 Sum_probs=75.7
Q ss_pred cCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-C
Q 001306 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-E 159 (1104)
Q Consensus 81 l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E 159 (1104)
..|--|||+||+=.+.-.||-....++. +++++.|+|+.+ +
T Consensus 42 ~~gP~illlHGfPe~wyswr~q~~~la~--------------------------------------~~~rviA~DlrGyG 83 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESWYSWRHQIPGLAS--------------------------------------RGYRVIAPDLRGYG 83 (322)
T ss_pred CCCCEEEEEccCCccchhhhhhhhhhhh--------------------------------------cceEEEecCCCCCC
Confidence 4666788999999999888866654321 246899999998 3
Q ss_pred CC-Cc---chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCccccccc
Q 001306 160 HS-AM---DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVE 235 (1104)
Q Consensus 160 ~S-Af---~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~ 235 (1104)
.| +- +--++..+++-+...|..+ . -+++++|||++|++||-.++. +.+++|+
T Consensus 84 ~Sd~P~~~~~Yt~~~l~~di~~lld~L----g-----------------~~k~~lvgHDwGaivaw~la~---~~Perv~ 139 (322)
T KOG4178|consen 84 FSDAPPHISEYTIDELVGDIVALLDHL----G-----------------LKKAFLVGHDWGAIVAWRLAL---FYPERVD 139 (322)
T ss_pred CCCCCCCcceeeHHHHHHHHHHHHHHh----c-----------------cceeEEEeccchhHHHHHHHH---hChhhcc
Confidence 32 22 2246777666665555443 2 368999999999999999764 1256799
Q ss_pred EEEEecCCCCC
Q 001306 236 TVLTLSSPHQS 246 (1104)
Q Consensus 236 ~IITLsTPH~~ 246 (1104)
++|+++.|+..
T Consensus 140 ~lv~~nv~~~~ 150 (322)
T KOG4178|consen 140 GLVTLNVPFPN 150 (322)
T ss_pred eEEEecCCCCC
Confidence 99999999983
No 73
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.66 E-value=0.00024 Score=82.93 Aligned_cols=79 Identities=11% Similarity=0.073 Sum_probs=49.5
Q ss_pred ceeEEEEeCCCC-CCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhC
Q 001306 148 RLDWFAVDLEGE-HSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH 226 (1104)
Q Consensus 148 ~lD~FaVDFnEE-~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~ 226 (1104)
++.++++|+++. .|.-.. .-.+.......+++++.+. . ..++++|.++||||||.+|..++..
T Consensus 222 Gy~vl~~D~pG~G~s~~~~-~~~d~~~~~~avld~l~~~-~--------------~vd~~ri~l~G~S~GG~~Al~~A~~ 285 (414)
T PRK05077 222 GIAMLTIDMPSVGFSSKWK-LTQDSSLLHQAVLNALPNV-P--------------WVDHTRVAAFGFRFGANVAVRLAYL 285 (414)
T ss_pred CCEEEEECCCCCCCCCCCC-ccccHHHHHHHHHHHHHhC-c--------------ccCcccEEEEEEChHHHHHHHHHHh
Confidence 578999999973 232111 1122222334555655322 1 1236799999999999999987642
Q ss_pred CCcccccccEEEEecCCCC
Q 001306 227 PLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 227 P~~~~~~V~~IITLsTPH~ 245 (1104)
.++.++++|++++|..
T Consensus 286 ---~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 286 ---EPPRLKAVACLGPVVH 301 (414)
T ss_pred ---CCcCceEEEEECCccc
Confidence 1346999999987753
No 74
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.63 E-value=0.00021 Score=79.44 Aligned_cols=72 Identities=28% Similarity=0.395 Sum_probs=45.6
Q ss_pred eEEEEeCCC-CCCCcch---hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh
Q 001306 150 DWFAVDLEG-EHSAMDG---QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 150 D~FaVDFnE-E~SAf~G---~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~ 225 (1104)
..+|+|+.+ +.|.+.. -.++. +.+|....|..+|++ .+.+|+||||||||-+|-..+.
T Consensus 104 r~~a~DlRgHGeTk~~~e~dlS~eT---~~KD~~~~i~~~fge---------------~~~~iilVGHSmGGaIav~~a~ 165 (343)
T KOG2564|consen 104 RCLALDLRGHGETKVENEDDLSLET---MSKDFGAVIKELFGE---------------LPPQIILVGHSMGGAIAVHTAA 165 (343)
T ss_pred eEEEeeccccCccccCChhhcCHHH---HHHHHHHHHHHHhcc---------------CCCceEEEeccccchhhhhhhh
Confidence 568999987 2333322 22333 344555666677864 2567999999999999966543
Q ss_pred CCCcccccccEEEEec
Q 001306 226 HPLLRKSAVETVLTLS 241 (1104)
Q Consensus 226 ~P~~~~~~V~~IITLs 241 (1104)
... .++ +.+|+++-
T Consensus 166 ~k~-lps-l~Gl~viD 179 (343)
T KOG2564|consen 166 SKT-LPS-LAGLVVID 179 (343)
T ss_pred hhh-chh-hhceEEEE
Confidence 322 233 77887774
No 75
>PLN00021 chlorophyllase
Probab=97.62 E-value=0.00021 Score=80.66 Aligned_cols=114 Identities=17% Similarity=0.117 Sum_probs=65.4
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~S 161 (1104)
++-+|+|+||..++.+.++.++..+++ .++.++++|+.+- .
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las--------------------------------------~G~~VvapD~~g~-~ 91 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIAS--------------------------------------HGFIVVAPQLYTL-A 91 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHh--------------------------------------CCCEEEEecCCCc-C
Confidence 455789999999988878877765432 1457788887651 1
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcc-cccccEEEE
Q 001306 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLR-KSAVETVLT 239 (1104)
Q Consensus 162 Af~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~-~~~V~~IIT 239 (1104)
.-.+ ..+.+...++++++.+..+.... +.....++++.++||||||.+|..++. +++.. +..+.++|.
T Consensus 92 ~~~~---~~~i~d~~~~~~~l~~~l~~~l~-------~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ 161 (313)
T PLN00021 92 GPDG---TDEIKDAAAVINWLSSGLAAVLP-------EGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIG 161 (313)
T ss_pred CCCc---hhhHHHHHHHHHHHHhhhhhhcc-------cccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEe
Confidence 1111 11222233344444322111000 000123578999999999999998764 44321 235788898
Q ss_pred ecCCCC
Q 001306 240 LSSPHQ 245 (1104)
Q Consensus 240 LsTPH~ 245 (1104)
+. |..
T Consensus 162 ld-Pv~ 166 (313)
T PLN00021 162 LD-PVD 166 (313)
T ss_pred ec-ccc
Confidence 85 443
No 76
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.61 E-value=0.00027 Score=79.66 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=29.1
Q ss_pred CceEEEEEEchhHHHHHHHHh-CCCcc----cccccEEEEecCCC
Q 001306 205 PKSVILVGHSVGGFVARAAII-HPLLR----KSAVETVLTLSSPH 244 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~-~P~~~----~~~V~~IITLsTPH 244 (1104)
..+++|+||||||.+++.++. .++.+ ...++++|.++.+.
T Consensus 141 ~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~ 185 (332)
T TIGR01607 141 RLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMI 185 (332)
T ss_pred CCceeEeeccCccHHHHHHHHHhccccccccccccceEEEeccce
Confidence 457999999999999998774 33311 12588999888554
No 77
>PRK11460 putative hydrolase; Provisional
Probab=97.47 E-value=0.0011 Score=71.32 Aligned_cols=119 Identities=14% Similarity=0.215 Sum_probs=65.4
Q ss_pred CccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEe-CCCCCC
Q 001306 83 GVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVD-LEGEHS 161 (1104)
Q Consensus 83 GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVD-FnEE~S 161 (1104)
.-.|||+||.+||-..+++++..+.+.+.+. ..+.|. +- .+..+..+..||.+. +.++ .
T Consensus 16 ~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~---------~~i~~~-g~---------~~~~~~~g~~W~~~~~~~~~-~ 75 (232)
T PRK11460 16 QQLLLLFHGVGDNPVAMGEIGSWFAPAFPDA---------LVVSVG-GP---------EPSGNGAGRQWFSVQGITED-N 75 (232)
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHCCCC---------EEECCC-CC---------CCcCCCCCcccccCCCCCcc-c
Confidence 3469999999999999999999876643111 000111 00 000111233455321 1111 0
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEe
Q 001306 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTL 240 (1104)
Q Consensus 162 Af~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITL 240 (1104)
. -..+.+..+.+.+.++++.+.+. .++++|+++||||||.+|..++. .| +.+.++|.+
T Consensus 76 ~--~~~~~~~~~~l~~~i~~~~~~~~---------------~~~~~i~l~GfS~Gg~~al~~a~~~~----~~~~~vv~~ 134 (232)
T PRK11460 76 R--QARVAAIMPTFIETVRYWQQQSG---------------VGASATALIGFSQGAIMALEAVKAEP----GLAGRVIAF 134 (232)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHhcC---------------CChhhEEEEEECHHHHHHHHHHHhCC----CcceEEEEe
Confidence 0 01233444445555555443332 23568999999999999988664 33 446677777
Q ss_pred cC
Q 001306 241 SS 242 (1104)
Q Consensus 241 sT 242 (1104)
+.
T Consensus 135 sg 136 (232)
T PRK11460 135 SG 136 (232)
T ss_pred cc
Confidence 53
No 78
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.45 E-value=0.00049 Score=77.36 Aligned_cols=78 Identities=21% Similarity=0.167 Sum_probs=53.5
Q ss_pred ceeEEEEeCCC-CCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH-h
Q 001306 148 RLDWFAVDLEG-EHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-I 225 (1104)
Q Consensus 148 ~lD~FaVDFnE-E~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l-~ 225 (1104)
++.+|++|-.| +.|-=-...+.+--..|++++.+.-+.-. | +..+..+.-|.||||||.||..+. .
T Consensus 82 g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~-----~-------~e~~~lp~FL~GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 82 GFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKE-----R-------EENKGLPRFLFGESMGGAVALLIALK 149 (313)
T ss_pred CCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhh-----c-------cccCCCCeeeeecCcchHHHHHHHhh
Confidence 67999999998 34432224566666788888887643311 1 223456899999999999999866 4
Q ss_pred CCCcccccccEEEEec
Q 001306 226 HPLLRKSAVETVLTLS 241 (1104)
Q Consensus 226 ~P~~~~~~V~~IITLs 241 (1104)
+|++ -+++|..+
T Consensus 150 ~p~~----w~G~ilva 161 (313)
T KOG1455|consen 150 DPNF----WDGAILVA 161 (313)
T ss_pred CCcc----cccceeee
Confidence 6654 66666665
No 79
>PLN02606 palmitoyl-protein thioesterase
Probab=97.24 E-value=0.0017 Score=73.31 Aligned_cols=59 Identities=24% Similarity=0.316 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhC-CCcccccccEEEEecCCCC
Q 001306 167 ILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH-PLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 167 tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~-P~~~~~~V~~IITLsTPH~ 245 (1104)
.+.+|+|.+-+.|+.+-.+ .+.+.+||+|=||.++|.+++. |+ ...|+.+|++|+||.
T Consensus 75 ~~~~Qv~~vce~l~~~~~L-------------------~~G~naIGfSQGglflRa~ierc~~--~p~V~nlISlggph~ 133 (306)
T PLN02606 75 PLRQQASIACEKIKQMKEL-------------------SEGYNIVAESQGNLVARGLIEFCDN--APPVINYVSLGGPHA 133 (306)
T ss_pred CHHHHHHHHHHHHhcchhh-------------------cCceEEEEEcchhHHHHHHHHHCCC--CCCcceEEEecCCcC
Confidence 5789999999888865322 3479999999999999999963 32 135999999999999
Q ss_pred C
Q 001306 246 S 246 (1104)
Q Consensus 246 ~ 246 (1104)
+
T Consensus 134 G 134 (306)
T PLN02606 134 G 134 (306)
T ss_pred C
Confidence 7
No 80
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.22 E-value=0.0024 Score=70.53 Aligned_cols=184 Identities=17% Similarity=0.229 Sum_probs=105.1
Q ss_pred ccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCC-CCC
Q 001306 84 VPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGE-HSA 162 (1104)
Q Consensus 84 vPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE-~SA 162 (1104)
.-+||-||||..=.|+=++-..++. ..+.++|+.|+.+- .|.
T Consensus 61 ~~lly~hGNa~Dlgq~~~~~~~l~~-------------------------------------~ln~nv~~~DYSGyG~S~ 103 (258)
T KOG1552|consen 61 PTLLYSHGNAADLGQMVELFKELSI-------------------------------------FLNCNVVSYDYSGYGRSS 103 (258)
T ss_pred eEEEEcCCcccchHHHHHHHHHHhh-------------------------------------cccceEEEEecccccccC
Confidence 4689999997766655444443322 13568899999872 221
Q ss_pred -cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEe
Q 001306 163 -MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTL 240 (1104)
Q Consensus 163 -f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITL 240 (1104)
-... ...-+.+..+.+++.+.|. ++++|+|+|||||-.++..++. .| +.++|+.
T Consensus 104 G~psE--~n~y~Di~avye~Lr~~~g----------------~~~~Iil~G~SiGt~~tv~Lasr~~------~~alVL~ 159 (258)
T KOG1552|consen 104 GKPSE--RNLYADIKAVYEWLRNRYG----------------SPERIILYGQSIGTVPTVDLASRYP------LAAVVLH 159 (258)
T ss_pred CCccc--ccchhhHHHHHHHHHhhcC----------------CCceEEEEEecCCchhhhhHhhcCC------cceEEEe
Confidence 1111 1333456666666655552 2689999999999999666554 22 7899988
Q ss_pred cCCCCCCCcccCcchHHHHHHHHH-HHHhcccCCCCCCCccccCCCCCcceEEEEecCCCCccccCCCccccCCCCCCcc
Q 001306 241 SSPHQSPPLALQPSLGNYFARVND-EWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIESLDGIVPPTHG 319 (1104)
Q Consensus 241 sTPH~~pPvafD~~l~~fY~~vn~-~W~~~~~~~~s~~~~~~~~~~l~~V~LVSIaGG~rD~~VPsdlTsl~~lvP~t~g 319 (1104)
+ |+. ..+.-.|..+.. +|-..+... .+-..-+++++-|.|- .|.+| |.+||
T Consensus 160 S------Pf~--S~~rv~~~~~~~~~~~d~f~~i--------~kI~~i~~PVLiiHgt-dDevv-----------~~sHg 211 (258)
T KOG1552|consen 160 S------PFT--SGMRVAFPDTKTTYCFDAFPNI--------EKISKITCPVLIIHGT-DDEVV-----------DFSHG 211 (258)
T ss_pred c------cch--hhhhhhccCcceEEeecccccc--------CcceeccCCEEEEecc-cCcee-----------ccccc
Confidence 5 322 122222322211 333332211 1122235677777665 34333 44444
Q ss_pred eeeeecc---cCceee-cCCCchhhhhHHHHHHHHHHHHhh
Q 001306 320 FMISSTG---MKNVWL-SMEHQAILWCNQLVVQVSHTLLSL 356 (1104)
Q Consensus 320 ~tV~TTs---IPgVWv-s~DH~aIVWC~QLv~~IAraLl~l 356 (1104)
..+.+.. .+-.|+ ...|..+---.|....+-+++-.+
T Consensus 212 ~~Lye~~k~~~epl~v~g~gH~~~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 212 KALYERCKEKVEPLWVKGAGHNDIELYPEYIEHLRRFISSV 252 (258)
T ss_pred HHHHHhccccCCCcEEecCCCcccccCHHHHHHHHHHHHHh
Confidence 4433322 233577 788999888888888887776554
No 81
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.14 E-value=0.0012 Score=73.77 Aligned_cols=108 Identities=17% Similarity=0.255 Sum_probs=61.3
Q ss_pred CCccEEEecCCCCcHH---HHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC
Q 001306 82 NGVPVLFIPGNAGSYK---QVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG 158 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYk---QvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE 158 (1104)
+-.||+..||-+.++. .+.++...+.+.+ -+.-+++|++.+
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~------------------------------------PG~yV~si~ig~ 47 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQH------------------------------------PGTYVHSIEIGN 47 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHS------------------------------------TT--EEE--SSS
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhC------------------------------------CCceEEEEEECC
Confidence 5579999999886543 4555554332221 123466777766
Q ss_pred CCCC--cch--hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccc
Q 001306 159 EHSA--MDG--QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAV 234 (1104)
Q Consensus 159 E~SA--f~G--~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V 234 (1104)
+... ..+ ..+.+|.|.+-+.|+.+-.+ ...+.+||+|=||.++|++++. +....|
T Consensus 48 ~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L-------------------~~G~~~IGfSQGgl~lRa~vq~--c~~~~V 106 (279)
T PF02089_consen 48 DPSEDVENSFFGNVNDQVEQVCEQLANDPEL-------------------ANGFNAIGFSQGGLFLRAYVQR--CNDPPV 106 (279)
T ss_dssp SHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG-------------------TT-EEEEEETCHHHHHHHHHHH---TSS-E
T ss_pred CcchhhhhhHHHHHHHHHHHHHHHHhhChhh-------------------hcceeeeeeccccHHHHHHHHH--CCCCCc
Confidence 5321 122 46788888888777754222 3579999999999999999962 222359
Q ss_pred cEEEEecCCCCC
Q 001306 235 ETVLTLSSPHQS 246 (1104)
Q Consensus 235 ~~IITLsTPH~~ 246 (1104)
+++|++|+||.+
T Consensus 107 ~nlISlggph~G 118 (279)
T PF02089_consen 107 HNLISLGGPHMG 118 (279)
T ss_dssp EEEEEES--TT-
T ss_pred eeEEEecCcccc
Confidence 999999999997
No 82
>PLN02442 S-formylglutathione hydrolase
Probab=97.12 E-value=0.007 Score=66.97 Aligned_cols=37 Identities=22% Similarity=0.386 Sum_probs=29.0
Q ss_pred CceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTPH~ 245 (1104)
+++++++||||||..|..++. +| +.+++++.++....
T Consensus 142 ~~~~~i~G~S~GG~~a~~~a~~~p----~~~~~~~~~~~~~~ 179 (283)
T PLN02442 142 TSRASIFGHSMGGHGALTIYLKNP----DKYKSVSAFAPIAN 179 (283)
T ss_pred CCceEEEEEChhHHHHHHHHHhCc----hhEEEEEEECCccC
Confidence 568999999999999988664 34 56888888876543
No 83
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.08 E-value=0.0039 Score=68.28 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=27.5
Q ss_pred CceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCC
Q 001306 205 PKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSP 243 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTP 243 (1104)
++++.++||||||.+|..++. +| +.+++++.++..
T Consensus 137 ~~~~~~~G~S~GG~~a~~~a~~~p----~~~~~~~~~~~~ 172 (275)
T TIGR02821 137 GERQGITGHSMGGHGALVIALKNP----DRFKSVSAFAPI 172 (275)
T ss_pred CCceEEEEEChhHHHHHHHHHhCc----ccceEEEEECCc
Confidence 568999999999999998764 44 457888887533
No 84
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.07 E-value=0.0024 Score=80.08 Aligned_cols=25 Identities=32% Similarity=0.422 Sum_probs=21.7
Q ss_pred CCceEEEEEEchhHHHHHHHHhCCC
Q 001306 204 LPKSVILVGHSVGGFVARAAIIHPL 228 (1104)
Q Consensus 204 ~p~sViLVGHSMGGiVAr~~l~~P~ 228 (1104)
+..+|.++||||||++++.++..++
T Consensus 553 ~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 553 DGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred CCCcEEEEecCHHHHHHHHHHHhcC
Confidence 4679999999999999999997653
No 85
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.94 E-value=0.0046 Score=70.13 Aligned_cols=60 Identities=25% Similarity=0.344 Sum_probs=48.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCCC
Q 001306 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPH 244 (1104)
Q Consensus 166 ~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTPH 244 (1104)
..+.+|+|.+-+.|+.+-.+ .+.+.+||||=||.++|.+++ .|+ ...|+.+|++|+||
T Consensus 73 ~~~~~Qve~vce~l~~~~~l-------------------~~G~naIGfSQGGlflRa~ierc~~--~p~V~nlISlggph 131 (314)
T PLN02633 73 MPLTQQAEIACEKVKQMKEL-------------------SQGYNIVGRSQGNLVARGLIEFCDG--GPPVYNYISLAGPH 131 (314)
T ss_pred eCHHHHHHHHHHHHhhchhh-------------------hCcEEEEEEccchHHHHHHHHHCCC--CCCcceEEEecCCC
Confidence 46899999999988875322 347999999999999999996 332 13599999999999
Q ss_pred CC
Q 001306 245 QS 246 (1104)
Q Consensus 245 ~~ 246 (1104)
.+
T Consensus 132 ~G 133 (314)
T PLN02633 132 AG 133 (314)
T ss_pred CC
Confidence 97
No 86
>PRK10162 acetyl esterase; Provisional
Probab=96.89 E-value=0.007 Score=68.04 Aligned_cols=106 Identities=16% Similarity=0.152 Sum_probs=62.6
Q ss_pred ccEEEecCCC---CcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCC
Q 001306 84 VPVLFIPGNA---GSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (1104)
Q Consensus 84 vPVLFIPGNA---GSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~ 160 (1104)
..|+|+||.+ |+...++.++..+++. .++.++++|...-.
T Consensus 82 p~vv~~HGGg~~~g~~~~~~~~~~~la~~-------------------------------------~g~~Vv~vdYrlap 124 (318)
T PRK10162 82 ATLFYLHGGGFILGNLDTHDRIMRLLASY-------------------------------------SGCTVIGIDYTLSP 124 (318)
T ss_pred CEEEEEeCCcccCCCchhhhHHHHHHHHH-------------------------------------cCCEEEEecCCCCC
Confidence 3588899976 8877776666654331 13577888877533
Q ss_pred CCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CC--CcccccccEE
Q 001306 161 SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HP--LLRKSAVETV 237 (1104)
Q Consensus 161 SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P--~~~~~~V~~I 237 (1104)
..-....++| +.++++++.+.-+ .-..++++++|+||||||.+|..++. .. ...+..++++
T Consensus 125 e~~~p~~~~D----~~~a~~~l~~~~~------------~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~ 188 (318)
T PRK10162 125 EARFPQAIEE----IVAVCCYFHQHAE------------DYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGV 188 (318)
T ss_pred CCCCCCcHHH----HHHHHHHHHHhHH------------HhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhhe
Confidence 2222333444 3444455432210 00123679999999999999988653 11 1112468888
Q ss_pred EEecC
Q 001306 238 LTLSS 242 (1104)
Q Consensus 238 ITLsT 242 (1104)
|++..
T Consensus 189 vl~~p 193 (318)
T PRK10162 189 LLWYG 193 (318)
T ss_pred EEECC
Confidence 88764
No 87
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.88 E-value=0.017 Score=59.63 Aligned_cols=79 Identities=19% Similarity=0.222 Sum_probs=49.5
Q ss_pred ceeEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-C
Q 001306 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-H 226 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~ 226 (1104)
++.++.+|..--.-+ ...++.+-+.++++++++.=. . -+.++++|+|+|+|.||.+|..++. .
T Consensus 29 g~~v~~~~Yrl~p~~----~~p~~~~D~~~a~~~l~~~~~-----~-------~~~d~~~i~l~G~SAGg~la~~~~~~~ 92 (211)
T PF07859_consen 29 GFVVVSIDYRLAPEA----PFPAALEDVKAAYRWLLKNAD-----K-------LGIDPERIVLIGDSAGGHLALSLALRA 92 (211)
T ss_dssp TSEEEEEE---TTTS----STTHHHHHHHHHHHHHHHTHH-----H-------HTEEEEEEEEEEETHHHHHHHHHHHHH
T ss_pred cEEEEEeeccccccc----cccccccccccceeeeccccc-----c-------ccccccceEEeecccccchhhhhhhhh
Confidence 457888888743222 345677778888888875400 0 0122679999999999999988664 1
Q ss_pred CCcccccccEEEEecC
Q 001306 227 PLLRKSAVETVLTLSS 242 (1104)
Q Consensus 227 P~~~~~~V~~IITLsT 242 (1104)
.+.....+++++.++.
T Consensus 93 ~~~~~~~~~~~~~~~p 108 (211)
T PF07859_consen 93 RDRGLPKPKGIILISP 108 (211)
T ss_dssp HHTTTCHESEEEEESC
T ss_pred hhhcccchhhhhcccc
Confidence 1211234889999874
No 88
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=96.82 E-value=0.0043 Score=64.64 Aligned_cols=80 Identities=24% Similarity=0.339 Sum_probs=51.1
Q ss_pred cceeEEEEeCCCCCC-------CcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHH
Q 001306 147 RRLDWFAVDLEGEHS-------AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFV 219 (1104)
Q Consensus 147 ~~lD~FaVDFnEE~S-------Af~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiV 219 (1104)
.++.++.+|+.+... +..|..=....+=+.++++++.+.+. .++++|.++|||+||.+
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---------------iD~~ri~i~G~S~GG~~ 77 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY---------------IDPDRIGIMGHSYGGYL 77 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS---------------EEEEEEEEEEETHHHHH
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc---------------ccceeEEEEcccccccc
Confidence 478999999998441 22222222233345566666655442 23789999999999999
Q ss_pred HHHHHh-CCCcccccccEEEEecCCCC
Q 001306 220 ARAAII-HPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 220 Ar~~l~-~P~~~~~~V~~IITLsTPH~ 245 (1104)
|..++. +|+ ..+.+|..+.+..
T Consensus 78 a~~~~~~~~~----~f~a~v~~~g~~d 100 (213)
T PF00326_consen 78 ALLAATQHPD----RFKAAVAGAGVSD 100 (213)
T ss_dssp HHHHHHHTCC----GSSEEEEESE-SS
T ss_pred cchhhcccce----eeeeeeccceecc
Confidence 999876 554 4788888875554
No 89
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.75 E-value=0.0045 Score=80.50 Aligned_cols=102 Identities=17% Similarity=0.143 Sum_probs=68.7
Q ss_pred cCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCC
Q 001306 81 LNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH 160 (1104)
Q Consensus 81 l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~ 160 (1104)
..+.|++++||..|+-..++.++..+.. ++.++++|..+..
T Consensus 1066 ~~~~~l~~lh~~~g~~~~~~~l~~~l~~---------------------------------------~~~v~~~~~~g~~ 1106 (1296)
T PRK10252 1066 GDGPTLFCFHPASGFAWQFSVLSRYLDP---------------------------------------QWSIYGIQSPRPD 1106 (1296)
T ss_pred CCCCCeEEecCCCCchHHHHHHHHhcCC---------------------------------------CCcEEEEECCCCC
Confidence 3467899999999998777777664211 2466777776532
Q ss_pred -CCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEE
Q 001306 161 -SAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVL 238 (1104)
Q Consensus 161 -SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~II 238 (1104)
..-...++++.|+.+.+.|+.+ .. ..+++++||||||.||..++. .++ .+..+..++
T Consensus 1107 ~~~~~~~~l~~la~~~~~~i~~~---~~-----------------~~p~~l~G~S~Gg~vA~e~A~~l~~-~~~~v~~l~ 1165 (1296)
T PRK10252 1107 GPMQTATSLDEVCEAHLATLLEQ---QP-----------------HGPYHLLGYSLGGTLAQGIAARLRA-RGEEVAFLG 1165 (1296)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhh---CC-----------------CCCEEEEEechhhHHHHHHHHHHHH-cCCceeEEE
Confidence 2222357888777766655543 11 237999999999999998764 222 245788888
Q ss_pred EecC
Q 001306 239 TLSS 242 (1104)
Q Consensus 239 TLsT 242 (1104)
++++
T Consensus 1166 l~~~ 1169 (1296)
T PRK10252 1166 LLDT 1169 (1296)
T ss_pred EecC
Confidence 8875
No 90
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.67 E-value=0.0082 Score=66.86 Aligned_cols=74 Identities=24% Similarity=0.390 Sum_probs=56.8
Q ss_pred eEEEEeCCCC--CCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-C
Q 001306 150 DWFAVDLEGE--HSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-H 226 (1104)
Q Consensus 150 D~FaVDFnEE--~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~ 226 (1104)
-+|++|.-++ .+-+ .-+.+|++-+-++|...-+ .++.+.+||-|-||.|||++++ .
T Consensus 55 ~v~~leig~g~~~s~l--~pl~~Qv~~~ce~v~~m~~-------------------lsqGynivg~SQGglv~Raliq~c 113 (296)
T KOG2541|consen 55 PVYCLEIGDGIKDSSL--MPLWEQVDVACEKVKQMPE-------------------LSQGYNIVGYSQGGLVARALIQFC 113 (296)
T ss_pred eeEEEEecCCcchhhh--ccHHHHHHHHHHHHhcchh-------------------ccCceEEEEEccccHHHHHHHHhC
Confidence 5677777654 3333 4699999999888873311 2678999999999999999986 3
Q ss_pred CCcccccccEEEEecCCCCCC
Q 001306 227 PLLRKSAVETVLTLSSPHQSP 247 (1104)
Q Consensus 227 P~~~~~~V~~IITLsTPH~~p 247 (1104)
++ ..|...|+||+||++-
T Consensus 114 d~---ppV~n~ISL~gPhaG~ 131 (296)
T KOG2541|consen 114 DN---PPVKNFISLGGPHAGI 131 (296)
T ss_pred CC---CCcceeEeccCCcCCc
Confidence 43 4599999999999973
No 91
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.67 E-value=0.0051 Score=61.49 Aligned_cols=42 Identities=24% Similarity=0.264 Sum_probs=31.5
Q ss_pred CceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTPH~~ 246 (1104)
..+++++||||||.+|..+.. ........+..++|+++|..+
T Consensus 27 ~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 27 DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 569999999999999998664 222112457789999987765
No 92
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=96.54 E-value=0.014 Score=65.59 Aligned_cols=103 Identities=20% Similarity=0.387 Sum_probs=75.9
Q ss_pred cCCcc---EEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCC
Q 001306 81 LNGVP---VLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLE 157 (1104)
Q Consensus 81 l~GvP---VLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFn 157 (1104)
.+|-| |+=+||.-||+++-|-|+..+.. .+++++.++++
T Consensus 30 ~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~--------------------------------------~~iR~I~iN~P 71 (297)
T PF06342_consen 30 PSGSPLGTVVAFHGSPGSHNDFKYIRPPLDE--------------------------------------AGIRFIGINYP 71 (297)
T ss_pred CCCCCceeEEEecCCCCCccchhhhhhHHHH--------------------------------------cCeEEEEeCCC
Confidence 35555 78899999999999999886421 25789999999
Q ss_pred C-CCCCc---chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccc
Q 001306 158 G-EHSAM---DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKS 232 (1104)
Q Consensus 158 E-E~SAf---~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~ 232 (1104)
+ +.+.- ...+=.+-+.|++..++.| . ..+.++.+|||.|+-.|..++. +|
T Consensus 72 Gf~~t~~~~~~~~~n~er~~~~~~ll~~l----~----------------i~~~~i~~gHSrGcenal~la~~~~----- 126 (297)
T PF06342_consen 72 GFGFTPGYPDQQYTNEERQNFVNALLDEL----G----------------IKGKLIFLGHSRGCENALQLAVTHP----- 126 (297)
T ss_pred CCCCCCCCcccccChHHHHHHHHHHHHHc----C----------------CCCceEEEEeccchHHHHHHHhcCc-----
Confidence 8 33321 1245667788988888765 1 1368999999999999988764 43
Q ss_pred cccEEEEecCCCCCC
Q 001306 233 AVETVLTLSSPHQSP 247 (1104)
Q Consensus 233 ~V~~IITLsTPH~~p 247 (1104)
+.+++++++|--.|
T Consensus 127 -~~g~~lin~~G~r~ 140 (297)
T PF06342_consen 127 -LHGLVLINPPGLRP 140 (297)
T ss_pred -cceEEEecCCcccc
Confidence 57999999875544
No 93
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=96.45 E-value=0.0074 Score=63.92 Aligned_cols=20 Identities=40% Similarity=0.675 Sum_probs=17.7
Q ss_pred ceEEEEEEchhHHHHHHHHh
Q 001306 206 KSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 206 ~sViLVGHSMGGiVAr~~l~ 225 (1104)
+.+.|||+||||..|..+..
T Consensus 59 ~~~~liGSSlGG~~A~~La~ 78 (187)
T PF05728_consen 59 ENVVLIGSSLGGFYATYLAE 78 (187)
T ss_pred CCeEEEEEChHHHHHHHHHH
Confidence 45999999999999998775
No 94
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.39 E-value=0.012 Score=65.29 Aligned_cols=102 Identities=23% Similarity=0.205 Sum_probs=69.1
Q ss_pred cEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCC-CCc
Q 001306 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEH-SAM 163 (1104)
Q Consensus 85 PVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~-SAf 163 (1104)
|++.+||-.|+=-+...|+....+. ..+++++-.+-. ...
T Consensus 2 pLF~fhp~~G~~~~~~~L~~~l~~~---------------------------------------~~v~~l~a~g~~~~~~ 42 (257)
T COG3319 2 PLFCFHPAGGSVLAYAPLAAALGPL---------------------------------------LPVYGLQAPGYGAGEQ 42 (257)
T ss_pred CEEEEcCCCCcHHHHHHHHHHhccC---------------------------------------ceeeccccCccccccc
Confidence 4555799999988888888864321 133344433311 111
Q ss_pred chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCC
Q 001306 164 DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSP 243 (1104)
Q Consensus 164 ~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTP 243 (1104)
.=.+++++|++..++|+.+. +--++.|+|+|+||.||..++..-.=+...|..++++-||
T Consensus 43 ~~~~l~~~a~~yv~~Ir~~Q--------------------P~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~ 102 (257)
T COG3319 43 PFASLDDMAAAYVAAIRRVQ--------------------PEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAV 102 (257)
T ss_pred ccCCHHHHHHHHHHHHHHhC--------------------CCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccC
Confidence 22589999999888888651 1238999999999999999775222234579999999877
Q ss_pred CC
Q 001306 244 HQ 245 (1104)
Q Consensus 244 H~ 245 (1104)
-.
T Consensus 103 ~~ 104 (257)
T COG3319 103 PP 104 (257)
T ss_pred CC
Confidence 66
No 95
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=96.17 E-value=0.0075 Score=70.23 Aligned_cols=58 Identities=17% Similarity=0.233 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEE-EEEEchhHHHHHHHHh-CCCcccccccEEEEecCC
Q 001306 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVI-LVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSP 243 (1104)
Q Consensus 166 ~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sVi-LVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTP 243 (1104)
-++.|+++.+.+.++.+ . .+++. +|||||||.+|..++. +| +.|+.+|.++|.
T Consensus 141 ~t~~d~~~~~~~ll~~l----g-----------------i~~~~~vvG~SmGG~ial~~a~~~P----~~v~~lv~ia~~ 195 (389)
T PRK06765 141 VTILDFVRVQKELIKSL----G-----------------IARLHAVMGPSMGGMQAQEWAVHYP----HMVERMIGVIGN 195 (389)
T ss_pred CcHHHHHHHHHHHHHHc----C-----------------CCCceEEEEECHHHHHHHHHHHHCh----HhhheEEEEecC
Confidence 57999998888777653 1 34665 9999999999999764 44 569999999877
Q ss_pred CCCCC
Q 001306 244 HQSPP 248 (1104)
Q Consensus 244 H~~pP 248 (1104)
...++
T Consensus 196 ~~~~~ 200 (389)
T PRK06765 196 PQNDA 200 (389)
T ss_pred CCCCh
Confidence 65543
No 96
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.01 E-value=0.021 Score=55.54 Aligned_cols=52 Identities=21% Similarity=0.346 Sum_probs=31.6
Q ss_pred CceEEEEEEchhHHHHHHHHhC---CCcccccccEEEEecCCCCCCCcccCcchHHHHHH
Q 001306 205 PKSVILVGHSVGGFVARAAIIH---PLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFAR 261 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~---P~~~~~~V~~IITLsTPH~~pPvafD~~l~~fY~~ 261 (1104)
+.++++.||||||.+|..+..+ ........-.+++.++|-- .|....+.+++
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~-----~~~~~~~~~~~ 117 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV-----GNSAFAKWYDS 117 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S-------BEHHHHHHHHH
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc-----cCHHHHHHHHh
Confidence 4689999999999999885531 1111124568888885544 35455555543
No 97
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.00 E-value=0.054 Score=58.98 Aligned_cols=37 Identities=22% Similarity=0.274 Sum_probs=27.5
Q ss_pred CceEEEEEEchhHHHHHHHHhC-CCcc-----cccccEEEEec
Q 001306 205 PKSVILVGHSVGGFVARAAIIH-PLLR-----KSAVETVLTLS 241 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~-P~~~-----~~~V~~IITLs 241 (1104)
.++|.|+|||||+.|.+.++.. .... ...+..||+++
T Consensus 92 ~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~A 134 (233)
T PF05990_consen 92 IKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAA 134 (233)
T ss_pred CceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEEC
Confidence 6799999999999999998742 1111 23678888886
No 98
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=95.85 E-value=0.017 Score=67.80 Aligned_cols=81 Identities=25% Similarity=0.356 Sum_probs=66.2
Q ss_pred cceeEEEEeCCCCCCCcchhhHHHHH-HHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh
Q 001306 147 RRLDWFAVDLEGEHSAMDGQILEEHA-EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 147 ~~lD~FaVDFnEE~SAf~G~tL~dQA-eyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~ 225 (1104)
.++++|.+|.........-..++|.. |.+.+||+.+.+.-. .+.|.+|||++||.++-+++.
T Consensus 138 ~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg-----------------~~~InliGyCvGGtl~~~ala 200 (445)
T COG3243 138 QGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITG-----------------QKDINLIGYCVGGTLLAAALA 200 (445)
T ss_pred cCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhC-----------------ccccceeeEecchHHHHHHHH
Confidence 37899999999876666678899999 999999999976643 368999999999999888776
Q ss_pred CCCcccccccEEEEecCCCCC
Q 001306 226 HPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 226 ~P~~~~~~V~~IITLsTPH~~ 246 (1104)
+ +...+|+++..+.||.+-
T Consensus 201 ~--~~~k~I~S~T~lts~~DF 219 (445)
T COG3243 201 L--MAAKRIKSLTLLTSPVDF 219 (445)
T ss_pred h--hhhcccccceeeecchhh
Confidence 3 223369999999988774
No 99
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.62 E-value=0.0083 Score=72.95 Aligned_cols=46 Identities=24% Similarity=0.325 Sum_probs=37.5
Q ss_pred CceEEEEEEchhHHHHHHHHhC------------CCcccccccEEEEecCCCCCCCcc
Q 001306 205 PKSVILVGHSVGGFVARAAIIH------------PLLRKSAVETVLTLSSPHQSPPLA 250 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~------------P~~~~~~V~~IITLsTPH~~pPva 250 (1104)
.++|+||||||||.+++..+.. +++....|+..|++|+|..++|-+
T Consensus 212 gkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lGs~Ka 269 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLGVPKA 269 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccCCcHHH
Confidence 4689999999999999997752 234556789999999999997643
No 100
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.60 E-value=0.023 Score=68.54 Aligned_cols=79 Identities=15% Similarity=0.050 Sum_probs=53.4
Q ss_pred cceeEEEEeCCC-CCCCcchhhH-HHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH
Q 001306 147 RRLDWFAVDLEG-EHSAMDGQIL-EEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI 224 (1104)
Q Consensus 147 ~~lD~FaVDFnE-E~SAf~G~tL-~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l 224 (1104)
.++.++++|+.+ +.|.-.-..+ .++++-+.++|+++..+.- ...+|.++||||||.+|..++
T Consensus 52 ~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~----------------~~~~v~~~G~S~GG~~a~~~a 115 (550)
T TIGR00976 52 QGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPW----------------CDGNVGMLGVSYLAVTQLLAA 115 (550)
T ss_pred CCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCC----------------CCCcEEEEEeChHHHHHHHHh
Confidence 378999999997 2332110112 5677778888888853310 135899999999999999977
Q ss_pred hCCCcccccccEEEEecCCC
Q 001306 225 IHPLLRKSAVETVLTLSSPH 244 (1104)
Q Consensus 225 ~~P~~~~~~V~~IITLsTPH 244 (1104)
... +..++++|..++..
T Consensus 116 ~~~---~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 116 VLQ---PPALRAIAPQEGVW 132 (550)
T ss_pred ccC---CCceeEEeecCccc
Confidence 531 34688888876553
No 101
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=95.54 E-value=0.086 Score=57.67 Aligned_cols=193 Identities=18% Similarity=0.294 Sum_probs=113.4
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC---
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG--- 158 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE--- 158 (1104)
+.--+|+.|||||+..---.++....++ .+..+|.+|..+
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~-------------------------------------l~mnv~ivsYRGYG~ 119 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVN-------------------------------------LKMNVLIVSYRGYGK 119 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHH-------------------------------------cCceEEEEEeecccc
Confidence 4446788999999977666666653322 134677788776
Q ss_pred -CCCCc-chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccE
Q 001306 159 -EHSAM-DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVET 236 (1104)
Q Consensus 159 -E~SAf-~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~ 236 (1104)
|.++- .|-.++.| .+|+|+... + .-+.++++|.|-|.||.||-.++.. + .+++.+
T Consensus 120 S~GspsE~GL~lDs~-----avldyl~t~-~--------------~~dktkivlfGrSlGGAvai~lask-~--~~ri~~ 176 (300)
T KOG4391|consen 120 SEGSPSEEGLKLDSE-----AVLDYLMTR-P--------------DLDKTKIVLFGRSLGGAVAIHLASK-N--SDRISA 176 (300)
T ss_pred CCCCccccceeccHH-----HHHHHHhcC-c--------------cCCcceEEEEecccCCeeEEEeecc-c--hhheee
Confidence 33332 23334443 355666321 0 1235799999999999999886652 1 347889
Q ss_pred EEEecC----CCCCCCcccCcchHHHHHHH--HHHHHhcccCCCCCCCccccCCCCCcceEEEEecCCCCccccCCCc-c
Q 001306 237 VLTLSS----PHQSPPLALQPSLGNYFARV--NDEWRKGYEAHTTPTGHHVSNSRLSHVVVVSISAGYHDYQVRSKIE-S 309 (1104)
Q Consensus 237 IITLsT----PH~~pPvafD~~l~~fY~~v--n~~W~~~~~~~~s~~~~~~~~~~l~~V~LVSIaGG~rD~~VPsdlT-s 309 (1104)
+|.-+| ||..-|..| |...++.... .+-|...-. -.-..++.+.|+| ..|.+||+-.- .
T Consensus 177 ~ivENTF~SIp~~~i~~v~-p~~~k~i~~lc~kn~~~S~~k------------i~~~~~P~LFiSG-lkDelVPP~~Mr~ 242 (300)
T KOG4391|consen 177 IIVENTFLSIPHMAIPLVF-PFPMKYIPLLCYKNKWLSYRK------------IGQCRMPFLFISG-LKDELVPPVMMRQ 242 (300)
T ss_pred eeeechhccchhhhhheec-cchhhHHHHHHHHhhhcchhh------------hccccCceEEeec-CccccCCcHHHHH
Confidence 988666 666555543 3333444443 234532110 0122568888865 68999988532 2
Q ss_pred ccCCCCCCcceeeeecccCce--eecCCCchhhhhHHHHHHHHHHHHhhc
Q 001306 310 LDGIVPPTHGFMISSTGMKNV--WLSMEHQAILWCNQLVVQVSHTLLSLI 357 (1104)
Q Consensus 310 l~~lvP~t~g~tV~TTsIPgV--Wvs~DH~aIVWC~QLv~~IAraLl~lv 357 (1104)
+-..-|. +.... +-...|..---|+--.++|..+|.+..
T Consensus 243 Ly~~c~S---------~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 243 LYELCPS---------RTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVV 283 (300)
T ss_pred HHHhCch---------hhhhheeCCCCccCceEEeccHHHHHHHHHHHhc
Confidence 2222221 11211 234455555558999999999999886
No 102
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=95.54 E-value=0.082 Score=62.37 Aligned_cols=125 Identities=15% Similarity=0.190 Sum_probs=81.3
Q ss_pred CCCCceEEEEeeCCcccchhHhhcccCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCcccc
Q 001306 56 SSARYALYLYHEGWKKIDFEEHLKQLNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNID 135 (1104)
Q Consensus 56 ~a~kY~LYlYrEg~~~~~~~~~~~~l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e 135 (1104)
..++=+|+.|....++ .+-...|||+||=-+|-|-.. ...+-+..
T Consensus 82 ~~~~~~L~~y~~~~~~-------~~~~~~pvLiV~Pl~g~~~~L---~RS~V~~L------------------------- 126 (406)
T TIGR01849 82 DKPFCRLIHFKRQGFR-------AELPGPAVLIVAPMSGHYATL---LRSTVEAL------------------------- 126 (406)
T ss_pred ECCCeEEEEECCCCcc-------cccCCCcEEEEcCCchHHHHH---HHHHHHHH-------------------------
Confidence 3567899999432110 011136999999988887765 12222211
Q ss_pred ccccccccccccceeEEEEeCCCCCCC--cch-hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEE
Q 001306 136 ASIFHSSNQYTRRLDWFAVDLEGEHSA--MDG-QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVG 212 (1104)
Q Consensus 136 ~~~~~~~~~~~~~lD~FaVDFnEE~SA--f~G-~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVG 212 (1104)
..++|+|.+|-..-.-. -+| -.|+|..+|+.++|+.+ . ++ +.++|
T Consensus 127 ----------l~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G-----------------~~-v~l~G 174 (406)
T TIGR01849 127 ----------LPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----G-----------------PD-IHVIA 174 (406)
T ss_pred ----------hCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----C-----------------CC-CcEEE
Confidence 01569999997763311 123 46899988998888766 1 34 89999
Q ss_pred EchhHHHHHHHHh-CCCc-ccccccEEEEecCCCCCC
Q 001306 213 HSVGGFVARAAII-HPLL-RKSAVETVLTLSSPHQSP 247 (1104)
Q Consensus 213 HSMGGiVAr~~l~-~P~~-~~~~V~~IITLsTPH~~p 247 (1104)
.+|||+.+.+++. +.+- .+..++.+++++||.+..
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCC
Confidence 9999998777553 2211 134699999999988753
No 103
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.47 E-value=0.03 Score=59.63 Aligned_cols=42 Identities=29% Similarity=0.412 Sum_probs=29.1
Q ss_pred CceEEEEEEchhHHHHHHHHhC-CCcccccccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAIIH-PLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~-P~~~~~~V~~IITLsTPH~~ 246 (1104)
..++++.||||||.+|..+... ........-.++|.++|-.+
T Consensus 127 ~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 127 DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 5689999999999999886541 11111234568999977764
No 104
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.42 E-value=0.088 Score=52.71 Aligned_cols=38 Identities=29% Similarity=0.392 Sum_probs=27.3
Q ss_pred ceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCCC
Q 001306 206 KSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPH 244 (1104)
Q Consensus 206 ~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTPH 244 (1104)
.+++++||||||.+|..++. .... ...+..++.+.++.
T Consensus 64 ~~~~l~g~s~Gg~~a~~~a~~l~~~-~~~~~~l~~~~~~~ 102 (212)
T smart00824 64 RPFVLVGHSSGGLLAHAVAARLEAR-GIPPAAVVLLDTYP 102 (212)
T ss_pred CCeEEEEECHHHHHHHHHHHHHHhC-CCCCcEEEEEccCC
Confidence 46899999999999977654 2221 34588888887644
No 105
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=95.38 E-value=0.057 Score=61.95 Aligned_cols=81 Identities=21% Similarity=0.180 Sum_probs=45.9
Q ss_pred ceeEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCC
Q 001306 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P 227 (1104)
+..++.||........+... ...++-|-+.|..++....+. .+.++++++|||||+|+-||=.+-..-
T Consensus 104 d~NVI~VDWs~~a~~~Y~~a-~~n~~~vg~~la~~l~~L~~~-----------~g~~~~~ihlIGhSLGAHvaG~aG~~~ 171 (331)
T PF00151_consen 104 DYNVIVVDWSRGASNNYPQA-VANTRLVGRQLAKFLSFLINN-----------FGVPPENIHLIGHSLGAHVAGFAGKYL 171 (331)
T ss_dssp -EEEEEEE-HHHHSS-HHHH-HHHHHHHHHHHHHHHHHHHHH-----------H---GGGEEEEEETCHHHHHHHHHHHT
T ss_pred CceEEEEcchhhccccccch-hhhHHHHHHHHHHHHHHHHhh-----------cCCChhHEEEEeeccchhhhhhhhhhc
Confidence 46899999987554444432 233444444444443332210 023478999999999999998877521
Q ss_pred CcccccccEEEEec
Q 001306 228 LLRKSAVETVLTLS 241 (1104)
Q Consensus 228 ~~~~~~V~~IITLs 241 (1104)
.- ..+|..|.-|-
T Consensus 172 ~~-~~ki~rItgLD 184 (331)
T PF00151_consen 172 KG-GGKIGRITGLD 184 (331)
T ss_dssp TT----SSEEEEES
T ss_pred cC-cceeeEEEecC
Confidence 11 35789999986
No 106
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=95.35 E-value=0.16 Score=53.99 Aligned_cols=50 Identities=30% Similarity=0.460 Sum_probs=38.1
Q ss_pred HHH-HHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEec
Q 001306 173 EYV-VYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 173 eyV-n~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLs 241 (1104)
+|+ ++.+.+|.+.|+.. +.+..|.||||||..|..++ .+|+ ...+++.+|
T Consensus 96 ~~l~~el~p~i~~~~~~~---------------~~~~~i~G~S~GG~~Al~~~l~~Pd----~F~~~~~~S 147 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTD---------------PDRRAIAGHSMGGYGALYLALRHPD----LFGAVIAFS 147 (251)
T ss_dssp HHHHTHHHHHHHHHSSEE---------------ECCEEEEEETHHHHHHHHHHHHSTT----TESEEEEES
T ss_pred eehhccchhHHHHhcccc---------------cceeEEeccCCCcHHHHHHHHhCcc----ccccccccC
Confidence 454 58888888888631 12289999999999999854 6775 489999998
No 107
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.96 E-value=0.031 Score=69.45 Aligned_cols=151 Identities=28% Similarity=0.240 Sum_probs=135.1
Q ss_pred hhhhccccccCCceeeeecCCCceEEccCCCcccccccCCCccccCCCCCceEEEEEeeCCCCceeEEEEEeHHHHHHHH
Q 001306 644 EHSRLCKMRCFPPVALAWDPTSGLYVFPNLFSETIIIDSSPALWSYSQGSEKTIVVLLVDPHCSYKTSVSVSVTAAASRF 723 (1104)
Q Consensus 644 e~~~~~~~~~F~P~~~qW~~~s~~~i~pNv~~~~~i~~~aP~~~~~~~~~~~l~l~l~~DP~C~~~isl~is~~~sl~rL 723 (1104)
+-...||..+||++...|.-..+++++|+++.+++..+.+++-|+..+. +...+..+.+|+|.|.++.-.+-.+...|.
T Consensus 618 ~~s~~lk~~~~P~~s~~~~~~iql~~~~~ly~l~iryr~~lAsfpv~~i-~l~~~~qf~~ph~~y~~~s~~sal~~~~rk 696 (973)
T KOG3724|consen 618 LISLTLKLFGFPWFSLDVLIVIQLQYQPALYALGIRYRGLLASFPVRQI-TLRLLVQFLVPHFLYLITSPLSALSGFTRK 696 (973)
T ss_pred ceeeeEEEeeCchHhhhHHhhhchhhhHhhhhhhheeehhhhhcchhHH-HHHHHHhhhhhccceeecchHHHHHHHHHH
Confidence 3346788999999999999889999999999999999999998876333 445567789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHhhcCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 001306 724 LLLYGSQIAGLSVAVVFFALMRQAYAWDYYLPMPSMLTVVEYNLQMPFPFLLLAILPILVSLFHSFLMSQPFP 796 (1104)
Q Consensus 724 ~lrYr~~i~afpvaVi~lvL~~Qf~~y~~t~~FpSF~~aL~~~Lr~~lp~lll~~~~l~~~~~~~~~~~~~~p 796 (1104)
++-|-..++.+.-.|+...|++|.+.+.. ...|-.....+...-++.++.++++.+...+.|++++|.|++|
T Consensus 697 ~li~~~f~v~~ss~vv~~~l~~q~~~~v~-dpvp~~~p~~~~~~nmh~~f~ll~v~~wf~s~~~~l~~v~~v~ 768 (973)
T KOG3724|consen 697 ILITARFVVFPSSKVVTPPLPEQERVQVE-DPVPIQLPNNRQRYNMHNRFRLLAVLPWFSSLFYSLLMVQPVP 768 (973)
T ss_pred HHHHHHHHhhhhhhhhchhhHHHHHHhhc-CCcccccchhHHhhcccchhhHHHHHHHHHHHHHHHHhhchhH
Confidence 99999999999999999999999999998 6677777788888899999999999999999999999999999
No 108
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=94.95 E-value=0.77 Score=53.36 Aligned_cols=84 Identities=20% Similarity=0.259 Sum_probs=52.5
Q ss_pred eEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCc
Q 001306 150 DWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLL 229 (1104)
Q Consensus 150 D~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~ 229 (1104)
.++..+.++=.+.-.--+.++.++--+.+++|+.+. .++++++.+++-|||+||.|+-.++....+
T Consensus 173 Nvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~--------------~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~ 238 (365)
T PF05677_consen 173 NVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDE--------------EQGPKAKNIILYGHSLGGGVQAEALKKEVL 238 (365)
T ss_pred cEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhc--------------ccCCChheEEEeeccccHHHHHHHHHhccc
Confidence 455556666222211134578888888999998643 234668999999999999998888765444
Q ss_pred cc-ccccEEEEe-cCCCCCC
Q 001306 230 RK-SAVETVLTL-SSPHQSP 247 (1104)
Q Consensus 230 ~~-~~V~~IITL-sTPH~~p 247 (1104)
+. +-|+-++.- -||..-+
T Consensus 239 ~~~dgi~~~~ikDRsfssl~ 258 (365)
T PF05677_consen 239 KGSDGIRWFLIKDRSFSSLA 258 (365)
T ss_pred ccCCCeeEEEEecCCcchHH
Confidence 32 235533333 4444433
No 109
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=94.87 E-value=0.14 Score=58.31 Aligned_cols=81 Identities=16% Similarity=0.213 Sum_probs=53.8
Q ss_pred ceeEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCC
Q 001306 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P 227 (1104)
++.+|-+-+.--.+++.-.+|++=++=+..||+|+.+. +. .....++|+|+|||-|.--+..++..+
T Consensus 63 ~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~-~~------------g~~~~~kIVLmGHSTGcQdvl~Yl~~~ 129 (303)
T PF08538_consen 63 GWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSE-KG------------GHFGREKIVLMGHSTGCQDVLHYLSSP 129 (303)
T ss_dssp T-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHH-S------------------S-EEEEEECCHHHHHHHHHHH-
T ss_pred CeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHh-hc------------cccCCccEEEEecCCCcHHHHHHHhcc
Confidence 45667777766666666689999999999999998644 10 011257999999999999999988755
Q ss_pred Cc--ccccccEEEEec
Q 001306 228 LL--RKSAVETVLTLS 241 (1104)
Q Consensus 228 ~~--~~~~V~~IITLs 241 (1104)
+. ....|++.|+-+
T Consensus 130 ~~~~~~~~VdG~ILQA 145 (303)
T PF08538_consen 130 NPSPSRPPVDGAILQA 145 (303)
T ss_dssp TT---CCCEEEEEEEE
T ss_pred CccccccceEEEEEeC
Confidence 43 246799999986
No 110
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=94.77 E-value=0.14 Score=54.04 Aligned_cols=73 Identities=25% Similarity=0.232 Sum_probs=44.0
Q ss_pred eEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH-hCCC
Q 001306 150 DWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPL 228 (1104)
Q Consensus 150 D~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l-~~P~ 228 (1104)
.||-++.-+.....+-..+.+-++++.+.|+...+.+ .++++|+|.|.|+||.+|..++ +.|
T Consensus 65 ~Wf~~~~~~~~~~~~~~~i~~s~~~l~~li~~~~~~~----------------i~~~ri~l~GFSQGa~~al~~~l~~p- 127 (216)
T PF02230_consen 65 AWFDIYDFDPEGPEDEAGIEESAERLDELIDEEVAYG----------------IDPSRIFLGGFSQGAAMALYLALRYP- 127 (216)
T ss_dssp -SS-BSCSSSSSEB-HHHHHHHHHHHHHHHHHHHHTT------------------GGGEEEEEETHHHHHHHHHHHCTS-
T ss_pred ceeeccCCCcchhhhHHHHHHHHHHHHHHHHHHHHcC----------------CChhheehhhhhhHHHHHHHHHHHcC-
Confidence 5554443222222333445566666666666543221 3467999999999999999966 444
Q ss_pred cccccccEEEEecC
Q 001306 229 LRKSAVETVLTLSS 242 (1104)
Q Consensus 229 ~~~~~V~~IITLsT 242 (1104)
+.+.++|.++.
T Consensus 128 ---~~~~gvv~lsG 138 (216)
T PF02230_consen 128 ---EPLAGVVALSG 138 (216)
T ss_dssp ---STSSEEEEES-
T ss_pred ---cCcCEEEEeec
Confidence 46899999984
No 111
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.58 E-value=0.027 Score=68.22 Aligned_cols=46 Identities=28% Similarity=0.656 Sum_probs=35.9
Q ss_pred CceEEEEEEchhHHHHHHHHh------CCCcc--cccccEEEEecCCCCCCCcc
Q 001306 205 PKSVILVGHSVGGFVARAAII------HPLLR--KSAVETVLTLSSPHQSPPLA 250 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~------~P~~~--~~~V~~IITLsTPH~~pPva 250 (1104)
..+|+-|||||||..|+.++. .|.+. -....++|.+++||++++++
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS~lA 578 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGSRLA 578 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCCccc
Confidence 458999999999999999663 23321 23467999999999999886
No 112
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=94.06 E-value=0.33 Score=53.01 Aligned_cols=52 Identities=21% Similarity=0.339 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEec
Q 001306 171 HAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 171 QAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLs 241 (1104)
.+++|...|+++.+.|. .++++|.+.|+|+||..+..+. .+|+ .+.++-..+
T Consensus 77 d~~~i~~lv~~v~~~~~---------------iD~~RVyv~G~S~Gg~ma~~la~~~pd----~faa~a~~s 129 (220)
T PF10503_consen 77 DVAFIAALVDYVAARYN---------------IDPSRVYVTGLSNGGMMANVLACAYPD----LFAAVAVVS 129 (220)
T ss_pred chhhHHHHHHhHhhhcc---------------cCCCceeeEEECHHHHHHHHHHHhCCc----cceEEEeec
Confidence 56788888999887774 3478999999999998888766 5664 366655444
No 113
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=93.98 E-value=0.66 Score=54.86 Aligned_cols=56 Identities=20% Similarity=0.125 Sum_probs=39.7
Q ss_pred HHHHHH-HHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEecC
Q 001306 170 EHAEYV-VYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 170 dQAeyV-n~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLsT 242 (1104)
+..+|+ ++.+-+|-+.|.. ..+++..+|.|+||||..|..+. .+|+ ....++.+|.
T Consensus 264 ~f~~~l~~eLlP~I~~~y~~-------------~~d~~~~~IaG~S~GGl~AL~~al~~Pd----~Fg~v~s~Sg 321 (411)
T PRK10439 264 DFWLAVQQELLPQVRAIAPF-------------SDDADRTVVAGQSFGGLAALYAGLHWPE----RFGCVLSQSG 321 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCC-------------CCCccceEEEEEChHHHHHHHHHHhCcc----cccEEEEecc
Confidence 334444 5666777666642 12367889999999999999865 5554 5889999984
No 114
>PLN02408 phospholipase A1
Probab=93.57 E-value=0.12 Score=60.12 Aligned_cols=59 Identities=27% Similarity=0.480 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-C-CCcccccccEEEEecCCCCC
Q 001306 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-H-PLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 173 eyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~-P~~~~~~V~~IITLsTPH~~ 246 (1104)
+.|.+.|+.+++.|++ .+.+|++.||||||.+|-.++. . .++.....-+++|.++|-.+
T Consensus 182 ~qVl~eI~~ll~~y~~---------------~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPRVG 242 (365)
T PLN02408 182 EMVREEIARLLQSYGD---------------EPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPRVG 242 (365)
T ss_pred HHHHHHHHHHHHhcCC---------------CCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCCcc
Confidence 4566777888888753 1358999999999999988653 1 11111113458999988877
No 115
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=93.48 E-value=0.54 Score=49.42 Aligned_cols=46 Identities=20% Similarity=0.323 Sum_probs=36.7
Q ss_pred CceEEEEEEchhHHHHHHHHhC---CCcccccccEEEEecCCCCCCCcc
Q 001306 205 PKSVILVGHSVGGFVARAAIIH---PLLRKSAVETVLTLSSPHQSPPLA 250 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~---P~~~~~~V~~IITLsTPH~~pPva 250 (1104)
.++++|+|+|.|+.|+..++.. +.-..++|.++++++-|.+.++..
T Consensus 80 ~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~~~~~ 128 (179)
T PF01083_consen 80 NTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRGAGQP 128 (179)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTBTTTT
T ss_pred CCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcccCCcc
Confidence 4699999999999999998754 333467899999999999976654
No 116
>PLN02310 triacylglycerol lipase
Probab=93.44 E-value=0.12 Score=60.88 Aligned_cols=61 Identities=23% Similarity=0.372 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCCCCC
Q 001306 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 173 eyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTPH~~ 246 (1104)
+.|.+.|+.+++.|++. .+..+|++.||||||.+|..++. .....++..-.++|.|+|..+
T Consensus 189 ~qVl~eV~~L~~~y~~~-------------~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRVG 250 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGK-------------GEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRVG 250 (405)
T ss_pred HHHHHHHHHHHHhhccc-------------CCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCcc
Confidence 34667778888888521 12358999999999999988552 111112222369999998887
No 117
>PLN00413 triacylglycerol lipase
Probab=93.31 E-value=0.15 Score=60.96 Aligned_cols=43 Identities=30% Similarity=0.363 Sum_probs=30.9
Q ss_pred CceEEEEEEchhHHHHHHHHh----C-CCcccccccEEEEecCCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAII----H-PLLRKSAVETVLTLSSPHQSP 247 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~----~-P~~~~~~V~~IITLsTPH~~p 247 (1104)
..++++.||||||.+|-.++. + +.-..+++.+++|.|+|-.+-
T Consensus 283 ~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRVGN 330 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRVGD 330 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCCcc
Confidence 358999999999999988653 1 111123567899999888763
No 118
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=93.30 E-value=0.23 Score=54.27 Aligned_cols=42 Identities=24% Similarity=0.318 Sum_probs=32.4
Q ss_pred ceEEEEEEchhHHHHHHHHhC-CCcccccccEEEEecCCCCCC
Q 001306 206 KSVILVGHSVGGFVARAAIIH-PLLRKSAVETVLTLSSPHQSP 247 (1104)
Q Consensus 206 ~sViLVGHSMGGiVAr~~l~~-P~~~~~~V~~IITLsTPH~~p 247 (1104)
..+++.|||.||.+|..++.. +.-..++|..+.+..+|--.+
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf~~ 126 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGFSE 126 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCCCh
Confidence 369999999999999997753 222256799999999886543
No 119
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=93.22 E-value=0.91 Score=47.76 Aligned_cols=103 Identities=21% Similarity=0.193 Sum_probs=62.5
Q ss_pred CCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCC
Q 001306 82 NGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (1104)
Q Consensus 82 ~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~S 161 (1104)
+.--||+||+-.|=..++|.+|..++. .++.++++|+=....
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~--------------------------------------~Gy~v~~pD~f~~~~ 54 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAE--------------------------------------EGYVVLAPDLFGGRG 54 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHH--------------------------------------TT-EEEEE-CCCCTS
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHh--------------------------------------cCCCEEecccccCCC
Confidence 344688899999999999999987543 146788888765433
Q ss_pred --Ccch----hhH--------HHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCC
Q 001306 162 --AMDG----QIL--------EEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (1104)
Q Consensus 162 --Af~G----~tL--------~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P 227 (1104)
.... ..+ +...+-+..+++++.++- ...+++|-+||.|+||.+|..++...
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~---------------~~~~~kig~vGfc~GG~~a~~~a~~~ 119 (218)
T PF01738_consen 55 APPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQP---------------EVDPGKIGVVGFCWGGKLALLLAARD 119 (218)
T ss_dssp --CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTT---------------TCEEEEEEEEEETHHHHHHHHHHCCT
T ss_pred CCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcc---------------ccCCCcEEEEEEecchHHhhhhhhhc
Confidence 1111 111 122233344455553221 12367999999999999999888632
Q ss_pred CcccccccEEEEec
Q 001306 228 LLRKSAVETVLTLS 241 (1104)
Q Consensus 228 ~~~~~~V~~IITLs 241 (1104)
..+++.+..-
T Consensus 120 ----~~~~a~v~~y 129 (218)
T PF01738_consen 120 ----PRVDAAVSFY 129 (218)
T ss_dssp ----TTSSEEEEES
T ss_pred ----cccceEEEEc
Confidence 3478887764
No 120
>PLN02454 triacylglycerol lipase
Probab=93.17 E-value=0.14 Score=60.60 Aligned_cols=59 Identities=24% Similarity=0.431 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhC---CCcccccc-cEEEEecCCCCCC
Q 001306 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH---PLLRKSAV-ETVLTLSSPHQSP 247 (1104)
Q Consensus 174 yVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~---P~~~~~~V-~~IITLsTPH~~p 247 (1104)
-+...|+.+++.|++ ...+|++.||||||.+|..++.. -.+.+..+ -+++|.++|-.+-
T Consensus 211 qvl~~V~~l~~~Yp~---------------~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 211 QLLAKIKELLERYKD---------------EKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHhCCC---------------CCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcccC
Confidence 455667777777752 12379999999999999886531 11111112 2569999888763
No 121
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=93.07 E-value=0.11 Score=57.38 Aligned_cols=78 Identities=15% Similarity=0.192 Sum_probs=44.7
Q ss_pred ceeEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCC
Q 001306 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P 227 (1104)
.++.++|++++-..-+.-..+.|...-+.+....|...|. .+++.+.||||||++|-.++..-
T Consensus 33 ~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~-----------------d~P~alfGHSmGa~lAfEvArrl 95 (244)
T COG3208 33 DIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLL-----------------DAPFALFGHSMGAMLAFEVARRL 95 (244)
T ss_pred hhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccC-----------------CCCeeecccchhHHHHHHHHHHH
Confidence 4688999999855544433333333333333333311121 35899999999999998866421
Q ss_pred CcccccccEEEEecC
Q 001306 228 LLRKSAVETVLTLSS 242 (1104)
Q Consensus 228 ~~~~~~V~~IITLsT 242 (1104)
+-......+++..|+
T Consensus 96 ~~~g~~p~~lfisg~ 110 (244)
T COG3208 96 ERAGLPPRALFISGC 110 (244)
T ss_pred HHcCCCcceEEEecC
Confidence 111223666776664
No 122
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=92.94 E-value=0.34 Score=57.23 Aligned_cols=54 Identities=15% Similarity=0.246 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCC
Q 001306 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 174 yVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
=+.+++++|...|. ..+...||-||||.+.-.++....- ...+.+-++++.|-.
T Consensus 183 Dl~~~v~~i~~~~P-----------------~a~l~avG~S~Gg~iL~nYLGE~g~-~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 183 DLREVVNHIKKRYP-----------------QAPLFAVGFSMGGNILTNYLGEEGD-NTPLIAAVAVCNPWD 236 (409)
T ss_pred HHHHHHHHHHHhCC-----------------CCceEEEEecchHHHHHHHhhhccC-CCCceeEEEEeccch
Confidence 36677889988875 2479999999999888888753321 124677777776654
No 123
>PLN02753 triacylglycerol lipase
Probab=92.80 E-value=0.18 Score=60.99 Aligned_cols=62 Identities=24% Similarity=0.381 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh---CCCcc----cccc-cEEEEecCCC
Q 001306 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII---HPLLR----KSAV-ETVLTLSSPH 244 (1104)
Q Consensus 173 eyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~---~P~~~----~~~V-~~IITLsTPH 244 (1104)
+-|...|+.+++.|++. ..+..+|++.|||+||.+|-.++. .-.+. ...+ -+++|.|+|-
T Consensus 291 eQVl~eVkrLl~~Y~~e------------~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPR 358 (531)
T PLN02753 291 EQILTEVKRLVEEHGDD------------DDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPR 358 (531)
T ss_pred HHHHHHHHHHHHHcccc------------cCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCC
Confidence 44667778888888631 112469999999999999988652 11110 0112 2699999988
Q ss_pred CC
Q 001306 245 QS 246 (1104)
Q Consensus 245 ~~ 246 (1104)
.+
T Consensus 359 VG 360 (531)
T PLN02753 359 VG 360 (531)
T ss_pred cc
Confidence 87
No 124
>PLN02571 triacylglycerol lipase
Probab=92.75 E-value=0.16 Score=60.00 Aligned_cols=59 Identities=20% Similarity=0.446 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhC---CCccc-----c-cc-cEEEEecC
Q 001306 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIH---PLLRK-----S-AV-ETVLTLSS 242 (1104)
Q Consensus 173 eyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~---P~~~~-----~-~V-~~IITLsT 242 (1104)
+.+...|+.+++.|++ ...+|++.||||||.+|..++.. -.+.. + .+ -+++|.|+
T Consensus 208 ~qvl~eV~~L~~~y~~---------------e~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGs 272 (413)
T PLN02571 208 DQVLNEVGRLVEKYKD---------------EEISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFAS 272 (413)
T ss_pred HHHHHHHHHHHHhcCc---------------ccccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCC
Confidence 3455556667777752 02379999999999999885531 11211 1 12 26789999
Q ss_pred CCCC
Q 001306 243 PHQS 246 (1104)
Q Consensus 243 PH~~ 246 (1104)
|..+
T Consensus 273 PRVG 276 (413)
T PLN02571 273 PRVG 276 (413)
T ss_pred CCcc
Confidence 9887
No 125
>PLN02162 triacylglycerol lipase
Probab=92.62 E-value=0.32 Score=58.32 Aligned_cols=51 Identities=27% Similarity=0.440 Sum_probs=34.3
Q ss_pred CceEEEEEEchhHHHHHHHHh----CC--CcccccccEEEEecCCCCCCCcccCcchHHHHHH
Q 001306 205 PKSVILVGHSVGGFVARAAII----HP--LLRKSAVETVLTLSSPHQSPPLALQPSLGNYFAR 261 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~----~P--~~~~~~V~~IITLsTPH~~pPvafD~~l~~fY~~ 261 (1104)
..++++.|||+||.+|-.++. +. ++ .+.+.+++|.|+|-.+ |....+++++
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~L~~~~~~~l-~~~~~~vYTFGqPRVG-----n~~FA~~~~~ 333 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAILAIHGEDEL-LDKLEGIYTFGQPRVG-----DEDFGEFMKG 333 (475)
T ss_pred CceEEEEecChHHHHHHHHHHHHHHcccccc-ccccceEEEeCCCCcc-----CHHHHHHHHh
Confidence 468999999999999987532 11 11 2346789999988776 4344444444
No 126
>PLN02802 triacylglycerol lipase
Probab=92.38 E-value=0.19 Score=60.68 Aligned_cols=59 Identities=24% Similarity=0.348 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCccccc-ccEEEEecCCCCC
Q 001306 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSA-VETVLTLSSPHQS 246 (1104)
Q Consensus 173 eyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~-V~~IITLsTPH~~ 246 (1104)
+.|.+.|+.+++.|++ ...+|++.||||||.+|-.++. .-+...+. .-.++|.|+|..+
T Consensus 312 eqVl~eV~~Ll~~Y~~---------------e~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPRVG 372 (509)
T PLN02802 312 ESVVGEVRRLMEKYKG---------------EELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPRVG 372 (509)
T ss_pred HHHHHHHHHHHHhCCC---------------CcceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCCcc
Confidence 4566667777777752 1248999999999999988553 11111111 1268999998887
No 127
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=92.31 E-value=0.23 Score=54.11 Aligned_cols=98 Identities=22% Similarity=0.284 Sum_probs=66.0
Q ss_pred cEEEecCC---CCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCCCCC
Q 001306 85 PVLFIPGN---AGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEGEHS 161 (1104)
Q Consensus 85 PVLFIPGN---AGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnEE~S 161 (1104)
-.+||||- +|..|+.-+++.-+.| +++.+-.||.+=
T Consensus 69 lfIfIHGGYW~~g~rk~clsiv~~a~~--------------------------------------~gY~vasvgY~l--- 107 (270)
T KOG4627|consen 69 LFIFIHGGYWQEGDRKMCLSIVGPAVR--------------------------------------RGYRVASVGYNL--- 107 (270)
T ss_pred EEEEEecchhhcCchhcccchhhhhhh--------------------------------------cCeEEEEeccCc---
Confidence 35789996 5777777777765543 244666666652
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEec
Q 001306 162 AMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 162 Af~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLs 241 (1104)
+-.++||++-.+-+.+-+++|++.|+. .+.+++-|||.|.-+|..++.. .+..+|.+++.++
T Consensus 108 ~~q~htL~qt~~~~~~gv~filk~~~n----------------~k~l~~gGHSaGAHLa~qav~R--~r~prI~gl~l~~ 169 (270)
T KOG4627|consen 108 CPQVHTLEQTMTQFTHGVNFILKYTEN----------------TKVLTFGGHSAGAHLAAQAVMR--QRSPRIWGLILLC 169 (270)
T ss_pred CcccccHHHHHHHHHHHHHHHHHhccc----------------ceeEEEcccchHHHHHHHHHHH--hcCchHHHHHHHh
Confidence 223456776666667777899988873 3568889999999888887752 2234566666654
No 128
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=92.26 E-value=0.23 Score=53.28 Aligned_cols=53 Identities=23% Similarity=0.281 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCCCC
Q 001306 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 173 eyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTPH~ 245 (1104)
||+.+||+++.++- ...+++|.|+|.|+||.+|..++. .| .|+++|.++.++.
T Consensus 4 Eyfe~Ai~~L~~~p---------------~v~~~~Igi~G~SkGaelALllAs~~~-----~i~avVa~~ps~~ 57 (213)
T PF08840_consen 4 EYFEEAIDWLKSHP---------------EVDPDKIGIIGISKGAELALLLASRFP-----QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHHHCST---------------TB--SSEEEEEETHHHHHHHHHHHHSS-----SEEEEEEES--SB
T ss_pred HHHHHHHHHHHhCC---------------CCCCCCEEEEEECHHHHHHHHHHhcCC-----CccEEEEeCCcee
Confidence 79999999996441 122579999999999999999886 33 5899999985554
No 129
>PLN03037 lipase class 3 family protein; Provisional
Probab=92.04 E-value=0.24 Score=59.92 Aligned_cols=61 Identities=18% Similarity=0.319 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCccccc-ccEEEEecCCCCCC
Q 001306 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSA-VETVLTLSSPHQSP 247 (1104)
Q Consensus 174 yVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~-V~~IITLsTPH~~p 247 (1104)
.|.+.|+.+++.|++. ....++++.||||||.+|..++. .....++. --+++|.|+|..+.
T Consensus 299 QVl~eV~rLv~~Yk~~-------------ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsPRVGN 361 (525)
T PLN03037 299 QVMEEVKRLVNFFKDR-------------GEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAPRVGN 361 (525)
T ss_pred HHHHHHHHHHHhcccc-------------CCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCCCccC
Confidence 4556677777777631 12458999999999999988552 11101111 24689999888763
No 130
>COG0400 Predicted esterase [General function prediction only]
Probab=92.04 E-value=1.1 Score=48.58 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=27.5
Q ss_pred CCceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEec
Q 001306 204 LPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 204 ~p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLs 241 (1104)
++++++++|.|=|+.+|..+. +.| ....++|.++
T Consensus 97 ~~~~ii~~GfSqGA~ial~~~l~~~----~~~~~ail~~ 131 (207)
T COG0400 97 DSSRIILIGFSQGANIALSLGLTLP----GLFAGAILFS 131 (207)
T ss_pred ChhheEEEecChHHHHHHHHHHhCc----hhhccchhcC
Confidence 367999999999999999955 554 3578888886
No 131
>PLN02761 lipase class 3 family protein
Probab=91.88 E-value=0.23 Score=60.10 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-C--CCcc-----cccc-cEEEEecCCC
Q 001306 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-H--PLLR-----KSAV-ETVLTLSSPH 244 (1104)
Q Consensus 174 yVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~--P~~~-----~~~V-~~IITLsTPH 244 (1104)
.|...|+.+++.|.+. ...+..+|++.||||||.+|..++. . -++. ...+ -+++|.|+|.
T Consensus 273 qVl~eV~rL~~~Y~~~-----------~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPR 341 (527)
T PLN02761 273 QVLAEVKRLVEYYGTE-----------EEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPR 341 (527)
T ss_pred HHHHHHHHHHHhcccc-----------cCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCC
Confidence 4566677777777420 0112458999999999999988552 1 1111 0011 2589999998
Q ss_pred CC
Q 001306 245 QS 246 (1104)
Q Consensus 245 ~~ 246 (1104)
.+
T Consensus 342 VG 343 (527)
T PLN02761 342 VG 343 (527)
T ss_pred cC
Confidence 87
No 132
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=91.81 E-value=0.1 Score=62.16 Aligned_cols=67 Identities=21% Similarity=0.348 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CC----CcccccccEEEEecC
Q 001306 168 LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HP----LLRKSAVETVLTLSS 242 (1104)
Q Consensus 168 L~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P----~~~~~~V~~IITLsT 242 (1104)
.+++-+|+.+.=+.|-..|+. +..++|+||+|||||.+.+..+. ++ .+....|+..|.++.
T Consensus 158 ~e~rd~yl~kLK~~iE~~~~~--------------~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~ 223 (473)
T KOG2369|consen 158 SEERDQYLSKLKKKIETMYKL--------------NGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGA 223 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHH--------------cCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCc
Confidence 566667776666666555542 11479999999999999999875 22 344456777888887
Q ss_pred CCCCCC
Q 001306 243 PHQSPP 248 (1104)
Q Consensus 243 PH~~pP 248 (1104)
|..+.|
T Consensus 224 p~lG~~ 229 (473)
T KOG2369|consen 224 PWLGSP 229 (473)
T ss_pred hhcCCh
Confidence 777765
No 133
>PLN02324 triacylglycerol lipase
Probab=91.24 E-value=0.38 Score=56.98 Aligned_cols=59 Identities=25% Similarity=0.373 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-C----CC-----cc-cccccEEEEecC
Q 001306 174 YVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-H----PL-----LR-KSAVETVLTLSS 242 (1104)
Q Consensus 174 yVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~----P~-----~~-~~~V~~IITLsT 242 (1104)
-|.+.|+.+++.|++ ...+|++.|||+||.+|-.++. . .+ .. ...--+++|.|+
T Consensus 198 qVl~eV~~L~~~Yp~---------------e~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGs 262 (415)
T PLN02324 198 QVQGELKRLLELYKN---------------EEISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGS 262 (415)
T ss_pred HHHHHHHHHHHHCCC---------------CCceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecC
Confidence 455667788888863 1248999999999999888653 1 00 00 111135899999
Q ss_pred CCCCC
Q 001306 243 PHQSP 247 (1104)
Q Consensus 243 PH~~p 247 (1104)
|..+-
T Consensus 263 PRVGN 267 (415)
T PLN02324 263 PRIGD 267 (415)
T ss_pred CCcCC
Confidence 98873
No 134
>PLN02719 triacylglycerol lipase
Probab=91.02 E-value=0.35 Score=58.52 Aligned_cols=63 Identities=25% Similarity=0.389 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CC--Ccc---cc-c-ccEEEEecCCC
Q 001306 173 EYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HP--LLR---KS-A-VETVLTLSSPH 244 (1104)
Q Consensus 173 eyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P--~~~---~~-~-V~~IITLsTPH 244 (1104)
+.|...|+.+++.|++. .....+|++.||||||.+|-.++. .- .+. .. . --+++|.|+|-
T Consensus 277 eQVl~eV~rL~~~Ypd~------------~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPR 344 (518)
T PLN02719 277 EQVLTEVKRLVERYGDE------------EGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPR 344 (518)
T ss_pred HHHHHHHHHHHHHCCcc------------cCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCC
Confidence 34556777788888631 012458999999999999988552 10 110 01 1 12589999998
Q ss_pred CCC
Q 001306 245 QSP 247 (1104)
Q Consensus 245 ~~p 247 (1104)
.+-
T Consensus 345 VGN 347 (518)
T PLN02719 345 VGN 347 (518)
T ss_pred ccC
Confidence 873
No 135
>PLN02934 triacylglycerol lipase
Probab=90.46 E-value=0.35 Score=58.49 Aligned_cols=53 Identities=21% Similarity=0.300 Sum_probs=34.8
Q ss_pred CceEEEEEEchhHHHHHHHHhC----CCcc-cccccEEEEecCCCCCCCcccCcchHHHHHHH
Q 001306 205 PKSVILVGHSVGGFVARAAIIH----PLLR-KSAVETVLTLSSPHQSPPLALQPSLGNYFARV 262 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~----P~~~-~~~V~~IITLsTPH~~pPvafD~~l~~fY~~v 262 (1104)
..++++.|||+||.+|-.++.. .+.. ...+..++|.|+|-.+ |....+++++.
T Consensus 320 ~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRVG-----N~~FA~~~~~~ 377 (515)
T PLN02934 320 NAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRIG-----NRQLGKFMEAQ 377 (515)
T ss_pred CCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCcc-----CHHHHHHHHHh
Confidence 3589999999999999886521 1110 1234578999988776 44445555443
No 136
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=90.12 E-value=2.5 Score=44.93 Aligned_cols=39 Identities=28% Similarity=0.347 Sum_probs=32.9
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~ 246 (1104)
...++++|||+|..|+=.+++.. ...++.+|.++||=-+
T Consensus 108 ~~~~tv~GHSYGS~v~G~A~~~~---~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 108 DAHLTVVGHSYGSTVVGLAAQQG---GLRVDDVVLVGSPGMG 146 (177)
T ss_pred CCCEEEEEecchhHHHHHHhhhC---CCCcccEEEECCCCCC
Confidence 56899999999999999988752 3468999999999764
No 137
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=89.43 E-value=6.4 Score=43.22 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=24.9
Q ss_pred CCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEe
Q 001306 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (1104)
Q Consensus 204 ~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITL 240 (1104)
.+++|.++|-||||.+|..++.... .+++.+..
T Consensus 110 ~~~~ig~~GfC~GG~~a~~~a~~~~----~v~a~v~f 142 (236)
T COG0412 110 DPKRIGVVGFCMGGGLALLAATRAP----EVKAAVAF 142 (236)
T ss_pred CCceEEEEEEcccHHHHHHhhcccC----CccEEEEe
Confidence 4789999999999999999887431 35554443
No 138
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=89.32 E-value=1.9 Score=50.03 Aligned_cols=40 Identities=23% Similarity=0.413 Sum_probs=29.5
Q ss_pred CceEEEEEEchhH-HHHHHHHhCCCcccccccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGG-FVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGG-iVAr~~l~~P~~~~~~V~~IITLsTPH~~ 246 (1104)
+.+...||-|||| ++|....+.- +.-.+++-++++.|...
T Consensus 147 ~r~~~avG~SLGgnmLa~ylgeeg--~d~~~~aa~~vs~P~Dl 187 (345)
T COG0429 147 PRPLYAVGFSLGGNMLANYLGEEG--DDLPLDAAVAVSAPFDL 187 (345)
T ss_pred CCceEEEEecccHHHHHHHHHhhc--cCcccceeeeeeCHHHH
Confidence 5689999999999 7777776532 23346888888877653
No 139
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=89.10 E-value=0.44 Score=49.77 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=28.7
Q ss_pred ceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCC
Q 001306 206 KSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 206 ~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
+.++|||||+|++.+..++. .. ....|.+++++|.|-.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~-~~-~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLA-EQ-SQKKVAGALLVAPFDP 92 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHH-HT-CCSSEEEEEEES--SC
T ss_pred CCeEEEEeCHHHHHHHHHHh-hc-ccccccEEEEEcCCCc
Confidence 46999999999999999883 11 2567999999986643
No 140
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.06 E-value=1.8 Score=50.71 Aligned_cols=37 Identities=19% Similarity=0.287 Sum_probs=25.6
Q ss_pred CceEEEEEEchhHHHHHHHHhCC---Cc--ccccccEEEEec
Q 001306 205 PKSVILVGHSVGGFVARAAIIHP---LL--RKSAVETVLTLS 241 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P---~~--~~~~V~~IITLs 241 (1104)
.++|.|++||||..+++.++..- ++ .+..++.+|..+
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAa 231 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAA 231 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeC
Confidence 57999999999999999987521 11 133456666553
No 141
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=88.65 E-value=2.1 Score=47.66 Aligned_cols=62 Identities=21% Similarity=0.165 Sum_probs=39.3
Q ss_pred ceeEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh
Q 001306 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~ 225 (1104)
+..++++|..=-.-.-....++| +.++++++.+.-. .-..++++|.+.|||.||.+|..+..
T Consensus 110 g~~vv~vdYrlaPe~~~p~~~~d----~~~a~~~l~~~~~------------~~g~dp~~i~v~GdSAGG~La~~~a~ 171 (312)
T COG0657 110 GAVVVSVDYRLAPEHPFPAALED----AYAAYRWLRANAA------------ELGIDPSRIAVAGDSAGGHLALALAL 171 (312)
T ss_pred CCEEEecCCCCCCCCCCCchHHH----HHHHHHHHHhhhH------------hhCCCccceEEEecCcccHHHHHHHH
Confidence 45788888774222223333333 6667777754321 01234889999999999999888664
No 142
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=87.47 E-value=4.7 Score=45.41 Aligned_cols=39 Identities=26% Similarity=0.245 Sum_probs=28.0
Q ss_pred CCCceEEEEEEchhHHHHHHHHh-CCC-cccccccEEEEec
Q 001306 203 SLPKSVILVGHSVGGFVARAAII-HPL-LRKSAVETVLTLS 241 (1104)
Q Consensus 203 ~~p~sViLVGHSMGGiVAr~~l~-~P~-~~~~~V~~IITLs 241 (1104)
++-+++.|.|||-||.+|-.++. +-+ -....++++|.+.
T Consensus 88 ~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lD 128 (259)
T PF12740_consen 88 PDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLD 128 (259)
T ss_pred ccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEec
Confidence 34678999999999999988664 211 0123688999885
No 143
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=86.75 E-value=1.3 Score=47.39 Aligned_cols=41 Identities=29% Similarity=0.345 Sum_probs=33.3
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPP 248 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~pP 248 (1104)
+..++||+||.|+.++..++.+.. ..|.+.+.++.|....|
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~---~~V~GalLVAppd~~~~ 98 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQ---RQVAGALLVAPPDVSRP 98 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhh---hccceEEEecCCCcccc
Confidence 346999999999999999887543 37999999998877655
No 144
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=86.28 E-value=1.1 Score=53.12 Aligned_cols=78 Identities=19% Similarity=0.251 Sum_probs=43.0
Q ss_pred cceeEEEEeCCCC-CCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHH-HH
Q 001306 147 RRLDWFAVDLEGE-HSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARA-AI 224 (1104)
Q Consensus 147 ~~lD~FaVDFnEE-~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~-~l 224 (1104)
+++...++|.++- .|.-.+-+ +|--.....+++++.+. . ..+.++|.++|-||||.+|-. +.
T Consensus 217 rGiA~LtvDmPG~G~s~~~~l~-~D~~~l~~aVLd~L~~~-p--------------~VD~~RV~~~G~SfGGy~AvRlA~ 280 (411)
T PF06500_consen 217 RGIAMLTVDMPGQGESPKWPLT-QDSSRLHQAVLDYLASR-P--------------WVDHTRVGAWGFSFGGYYAVRLAA 280 (411)
T ss_dssp CT-EEEEE--TTSGGGTTT-S--S-CCHHHHHHHHHHHHS-T--------------TEEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCCEEEEEccCCCcccccCCCC-cCHHHHHHHHHHHHhcC-C--------------ccChhheEEEEeccchHHHHHHHH
Confidence 5788999999984 33222211 22112334455555321 1 234679999999999998854 44
Q ss_pred hCCCcccccccEEEEecCCC
Q 001306 225 IHPLLRKSAVETVLTLSSPH 244 (1104)
Q Consensus 225 ~~P~~~~~~V~~IITLsTPH 244 (1104)
.++ ++++++|++++|-
T Consensus 281 le~----~RlkavV~~Ga~v 296 (411)
T PF06500_consen 281 LED----PRLKAVVALGAPV 296 (411)
T ss_dssp HTT----TT-SEEEEES---
T ss_pred hcc----cceeeEeeeCchH
Confidence 433 4699999999883
No 145
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=85.55 E-value=0.95 Score=49.47 Aligned_cols=85 Identities=18% Similarity=0.220 Sum_probs=56.5
Q ss_pred eeEEEEeCCCCCCC------cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHH
Q 001306 149 LDWFAVDLEGEHSA------MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARA 222 (1104)
Q Consensus 149 lD~FaVDFnEE~SA------f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~ 222 (1104)
+.+.+.|=++-.+. |.-+-..+-|||..+.++.+ + -+++.+.|.|=||+-|..
T Consensus 72 ~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL----k-----------------~~~fsvlGWSdGgiTali 130 (277)
T KOG2984|consen 72 VTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL----K-----------------LEPFSVLGWSDGGITALI 130 (277)
T ss_pred eEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh----C-----------------CCCeeEeeecCCCeEEEE
Confidence 56778887774333 23355666688877777665 1 368999999999999988
Q ss_pred HHh-CCCcccccccEEEEecCCCCCCCcccCcchHHHHHHHH
Q 001306 223 AII-HPLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARVN 263 (1104)
Q Consensus 223 ~l~-~P~~~~~~V~~IITLsTPH~~pPvafD~~l~~fY~~vn 263 (1104)
++. .+ +.|+.+|..+. ++.++- .=...|+.|.
T Consensus 131 vAak~~----e~v~rmiiwga---~ayvn~--~~~ma~kgiR 163 (277)
T KOG2984|consen 131 VAAKGK----EKVNRMIIWGA---AAYVNH--LGAMAFKGIR 163 (277)
T ss_pred eeccCh----hhhhhheeecc---cceecc--hhHHHHhchH
Confidence 664 44 45999999873 333332 3344566664
No 146
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.34 E-value=2.5 Score=45.34 Aligned_cols=106 Identities=26% Similarity=0.424 Sum_probs=67.1
Q ss_pred cccCCccEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC
Q 001306 79 KQLNGVPVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG 158 (1104)
Q Consensus 79 ~~l~GvPVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE 158 (1104)
-.-.|+||+-.|-..|++-|--.++-..+-.- +-+ .-.+.+|++|=-.
T Consensus 22 yGHaG~pVvvFpts~Grf~eyed~G~v~ala~---------fie-----------------------~G~vQlft~~gld 69 (227)
T COG4947 22 YGHAGIPVVVFPTSGGRFNEYEDFGMVDALAS---------FIE-----------------------EGLVQLFTLSGLD 69 (227)
T ss_pred ccCCCCcEEEEecCCCcchhhhhcccHHHHHH---------HHh-----------------------cCcEEEEEecccc
Confidence 35689999999999999988776665432210 111 1256888888665
Q ss_pred CCCCcch-----hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHH-HhCCCcccc
Q 001306 159 EHSAMDG-----QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAA-IIHPLLRKS 232 (1104)
Q Consensus 159 E~SAf~G-----~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~-l~~P~~~~~ 232 (1104)
-.|-+.+ .-.++.+.|-..+|+.. .|.+.+.-|-||||.-|... +.+|+.
T Consensus 70 sESf~a~h~~~adr~~rH~AyerYv~eEa---------------------lpgs~~~sgcsmGayhA~nfvfrhP~l--- 125 (227)
T COG4947 70 SESFLATHKNAADRAERHRAYERYVIEEA---------------------LPGSTIVSGCSMGAYHAANFVFRHPHL--- 125 (227)
T ss_pred hHhHhhhcCCHHHHHHHHHHHHHHHHHhh---------------------cCCCccccccchhhhhhhhhheeChhH---
Confidence 4444333 22344444443333322 25677888999999988884 477754
Q ss_pred cccEEEEec
Q 001306 233 AVETVLTLS 241 (1104)
Q Consensus 233 ~V~~IITLs 241 (1104)
..++|.+|
T Consensus 126 -ftkvialS 133 (227)
T COG4947 126 -FTKVIALS 133 (227)
T ss_pred -hhhheeec
Confidence 67788886
No 147
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=84.76 E-value=1.6 Score=50.28 Aligned_cols=55 Identities=27% Similarity=0.442 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh---CCCcccccccEEEEecCCCCC
Q 001306 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII---HPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 175 Vn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~---~P~~~~~~V~~IITLsTPH~~ 246 (1104)
+.+-++.++++|+ .-+|++-||||||.+|-.++. .-+.....-.+++|.|.|-.+
T Consensus 157 ~~~~~~~L~~~~~-----------------~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PRvG 214 (336)
T KOG4569|consen 157 LDAELRRLIELYP-----------------NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPRVG 214 (336)
T ss_pred HHHHHHHHHHhcC-----------------CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCcc
Confidence 4455677777775 358999999999988877553 112222345599999977665
No 148
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=82.41 E-value=2.4 Score=50.08 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=25.6
Q ss_pred CCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEec
Q 001306 203 SLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 203 ~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLs 241 (1104)
.++++|-.+|+||||.-+..+..+ .++|+..|..+
T Consensus 223 VD~~RIG~~GfSmGg~~a~~LaAL----DdRIka~v~~~ 257 (390)
T PF12715_consen 223 VDPDRIGCMGFSMGGYRAWWLAAL----DDRIKATVANG 257 (390)
T ss_dssp EEEEEEEEEEEGGGHHHHHHHHHH-----TT--EEEEES
T ss_pred cCccceEEEeecccHHHHHHHHHc----chhhHhHhhhh
Confidence 347899999999999999997764 24587777665
No 149
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=81.54 E-value=12 Score=42.40 Aligned_cols=35 Identities=17% Similarity=0.419 Sum_probs=26.1
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCcccccccEEEEe
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITL 240 (1104)
..+++++|||.|.+..+.++.. .-....|...+.|
T Consensus 109 ~~ki~iiGHSiGaYm~Lqil~~-~k~~~~vqKa~~L 143 (301)
T KOG3975|consen 109 DRKIYIIGHSIGAYMVLQILPS-IKLVFSVQKAVLL 143 (301)
T ss_pred CCEEEEEecchhHHHHHHHhhh-cccccceEEEEEe
Confidence 5699999999999988887752 1123467777777
No 150
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=80.42 E-value=7.8 Score=43.09 Aligned_cols=70 Identities=21% Similarity=0.238 Sum_probs=45.4
Q ss_pred eeEEEEeCCC----CCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH
Q 001306 149 LDWFAVDLEG----EHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI 224 (1104)
Q Consensus 149 lD~FaVDFnE----E~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l 224 (1104)
.-.|-.||.+ +.| |+-+.-...||-+..+++++.+.- .---+++|||-||-|+..+.
T Consensus 63 is~fRfDF~GnGeS~gs-f~~Gn~~~eadDL~sV~q~~s~~n------------------r~v~vi~gHSkGg~Vvl~ya 123 (269)
T KOG4667|consen 63 ISAFRFDFSGNGESEGS-FYYGNYNTEADDLHSVIQYFSNSN------------------RVVPVILGHSKGGDVVLLYA 123 (269)
T ss_pred ceEEEEEecCCCCcCCc-cccCcccchHHHHHHHHHHhccCc------------------eEEEEEEeecCccHHHHHHH
Confidence 4567778876 233 333344455677888888773210 22457899999999999977
Q ss_pred hCCCcccccccEEEEec
Q 001306 225 IHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 225 ~~P~~~~~~V~~IITLs 241 (1104)
. .|.. +..+|.++
T Consensus 124 ~--K~~d--~~~viNcs 136 (269)
T KOG4667|consen 124 S--KYHD--IRNVINCS 136 (269)
T ss_pred H--hhcC--chheEEcc
Confidence 5 2311 77888886
No 151
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=79.12 E-value=2.3 Score=49.86 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=33.4
Q ss_pred CceEE-EEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCCCCcc
Q 001306 205 PKSVI-LVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLA 250 (1104)
Q Consensus 205 p~sVi-LVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~pPva 250 (1104)
.+++. +||-||||+.|...+. .| ++.|..+|.++|+++..|..
T Consensus 145 I~~l~avvGgSmGGMqaleWa~--~y-Pd~V~~~i~ia~~~r~s~~~ 188 (368)
T COG2021 145 IKKLAAVVGGSMGGMQALEWAI--RY-PDRVRRAIPIATAARLSAQN 188 (368)
T ss_pred cceEeeeeccChHHHHHHHHHH--hC-hHHHhhhheecccccCCHHH
Confidence 44554 9999999999999764 22 45699999999988877743
No 152
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=78.17 E-value=5.1 Score=47.53 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=33.1
Q ss_pred CCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCC
Q 001306 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 204 ~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
+|++|+|.|||.||..+..++..|.. .+..+++|++|.+..
T Consensus 174 d~~~v~~~G~SaG~~~~~~~~~~~~~-~~lf~~~i~~sg~~~ 214 (493)
T cd00312 174 DPDSVTIFGESAGGASVSLLLLSPDS-KGLFHRAISQSGSAL 214 (493)
T ss_pred CcceEEEEeecHHHHHhhhHhhCcch-hHHHHHHhhhcCCcc
Confidence 47899999999999999988876653 567888898885554
No 153
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=78.11 E-value=9.7 Score=44.84 Aligned_cols=33 Identities=27% Similarity=0.354 Sum_probs=23.6
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCcccccccEEEEec
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLs 241 (1104)
.++|.+.|||.||..|..++... ..++..|.|-
T Consensus 227 ~~~i~~~GHSFGGATa~~~l~~d----~r~~~~I~LD 259 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATALQALRQD----TRFKAGILLD 259 (379)
T ss_dssp EEEEEEEEETHHHHHHHHHHHH-----TT--EEEEES
T ss_pred hhheeeeecCchHHHHHHHHhhc----cCcceEEEeC
Confidence 57899999999998888866522 4467777774
No 154
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=78.05 E-value=29 Score=39.89 Aligned_cols=61 Identities=15% Similarity=0.193 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecC
Q 001306 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 166 ~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsT 242 (1104)
.....|.+.+..-|+...+..++ ....+++||||.+|...+..++.. .....++++|+++.
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~--------------~~~~~ivlIg~G~gA~~~~~~la~--~~~~~~daLV~I~a 227 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQ--------------QGGKNIVLIGHGTGAGWAARYLAE--KPPPMPDALVLINA 227 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHh--------------cCCceEEEEEeChhHHHHHHHHhc--CCCcccCeEEEEeC
Confidence 45666666666666555443321 114569999999999888887762 22445899999983
No 155
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=77.64 E-value=6.5 Score=46.01 Aligned_cols=41 Identities=32% Similarity=0.412 Sum_probs=30.4
Q ss_pred ceEEEEEEchhHHHHHHHHh-CCCc-ccccccEEEEecCCCCC
Q 001306 206 KSVILVGHSVGGFVARAAII-HPLL-RKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 206 ~sViLVGHSMGGiVAr~~l~-~P~~-~~~~V~~IITLsTPH~~ 246 (1104)
.+|+|||||||+-|...++. +.+- ..+.|+.++++++|...
T Consensus 220 RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 220 RPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 36999999999988887653 3322 23568999999977654
No 156
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=77.03 E-value=3.7 Score=43.76 Aligned_cols=38 Identities=29% Similarity=0.499 Sum_probs=30.7
Q ss_pred eEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCCC
Q 001306 207 SVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSP 247 (1104)
Q Consensus 207 sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~p 247 (1104)
+.++-||||||-+|-+++. +.+.. |+++++++=|..-|
T Consensus 90 pLi~GGkSmGGR~aSmvad--e~~A~-i~~L~clgYPfhpp 127 (213)
T COG3571 90 PLIIGGKSMGGRVASMVAD--ELQAP-IDGLVCLGYPFHPP 127 (213)
T ss_pred ceeeccccccchHHHHHHH--hhcCC-cceEEEecCccCCC
Confidence 7999999999999988775 22233 99999999998744
No 157
>PLN02847 triacylglycerol lipase
Probab=76.55 E-value=4.5 Score=50.18 Aligned_cols=20 Identities=35% Similarity=0.446 Sum_probs=16.7
Q ss_pred CceEEEEEEchhHHHHHHHH
Q 001306 205 PKSVILVGHSVGGFVARAAI 224 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l 224 (1104)
.-+++++||||||-||-.+.
T Consensus 250 dYkLVITGHSLGGGVAALLA 269 (633)
T PLN02847 250 DFKIKIVGHSLGGGTAALLT 269 (633)
T ss_pred CCeEEEeccChHHHHHHHHH
Confidence 35899999999998887754
No 158
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=75.89 E-value=4.8 Score=45.51 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=24.2
Q ss_pred CceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEec
Q 001306 205 PKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLs 241 (1104)
.++-.++||||||+++..++ +.|. .....+..|
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~----~F~~y~~~S 169 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPD----CFGRYGLIS 169 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcc----hhceeeeec
Confidence 44578999999999998865 5543 366666665
No 159
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=75.63 E-value=13 Score=43.94 Aligned_cols=73 Identities=25% Similarity=0.352 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEecCCC
Q 001306 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLSSPH 244 (1104)
Q Consensus 166 ~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLsTPH 244 (1104)
+.|+|-|.|+.. +...+.. .+..++|++|=|.||.+|--+- ..|+ .+.+-+.=|+|.
T Consensus 91 QALaD~a~F~~~----~~~~~~~--------------~~~~pwI~~GgSY~G~Laaw~r~kyP~----~~~ga~ASSapv 148 (434)
T PF05577_consen 91 QALADLAYFIRY----VKKKYNT--------------APNSPWIVFGGSYGGALAAWFRLKYPH----LFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHHHHHHH----HHHHTTT--------------GCC--EEEEEETHHHHHHHHHHHH-TT----T-SEEEEET--C
T ss_pred HHHHHHHHHHHH----HHHhhcC--------------CCCCCEEEECCcchhHHHHHHHhhCCC----eeEEEEecccee
Confidence 567777777644 3333321 1245899999999998888765 5564 588999988777
Q ss_pred CCCCcccCcchHHHHHHHHHH
Q 001306 245 QSPPLALQPSLGNYFARVNDE 265 (1104)
Q Consensus 245 ~~pPvafD~~l~~fY~~vn~~ 265 (1104)
.. -.+..++|+.+.+.
T Consensus 149 ~a-----~~df~~y~~~v~~~ 164 (434)
T PF05577_consen 149 QA-----KVDFWEYFEVVTES 164 (434)
T ss_dssp CH-----CCTTTHHHHHHHHH
T ss_pred ee-----ecccHHHHHHHHHH
Confidence 63 23445677666433
No 160
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=73.78 E-value=11 Score=44.60 Aligned_cols=57 Identities=19% Similarity=0.260 Sum_probs=38.8
Q ss_pred CCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCCCCcccCcchHHHHHHH
Q 001306 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARV 262 (1104)
Q Consensus 204 ~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~pPvafD~~l~~fY~~v 262 (1104)
+|++|+|.|||.||..+...+..|. ..+..++.|++|.+.. .+...+..-.+.++++
T Consensus 206 Dp~~VTl~G~SAGa~sv~~~l~sp~-~~~LF~raI~~SGs~~-~~~~~~~~~~~~~~~l 262 (535)
T PF00135_consen 206 DPDNVTLFGQSAGAASVSLLLLSPS-SKGLFHRAILQSGSAL-SPWATSENPEQQAQKL 262 (535)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHGGG-GTTSBSEEEEES--TT-STTSSBSHHHHHHHHH
T ss_pred CCcceeeeeecccccccceeeeccc-cccccccccccccccc-cccccccccchhhhhh
Confidence 4889999999999988888766554 3678999999986444 3333443334555554
No 161
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=72.99 E-value=16 Score=39.77 Aligned_cols=60 Identities=25% Similarity=0.273 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEecCCCC
Q 001306 169 EEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 169 ~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLsTPH~ 245 (1104)
++-|.-+.+.|++....++ .++|+|||-|.|.=|.-.++ .+|.-..++|..+++|+-.+.
T Consensus 48 ~~~a~Dl~~~i~~y~~~w~-----------------~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 48 EQTAADLARIIRHYRARWG-----------------RKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTT 108 (192)
T ss_pred HHHHHHHHHHHHHHHHHhC-----------------CceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCc
Confidence 4445566666666554443 46899999999996666644 567555778999999984443
No 162
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=72.17 E-value=9.7 Score=45.93 Aligned_cols=69 Identities=19% Similarity=0.195 Sum_probs=45.6
Q ss_pred cccccceeEEEEeCC-C-CCCCc-c---hhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchh
Q 001306 143 NQYTRRLDWFAVDLE-G-EHSAM-D---GQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVG 216 (1104)
Q Consensus 143 ~~~~~~lD~FaVDFn-E-E~SAf-~---G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMG 216 (1104)
....+..+..-+|-+ + ++|-- . ....++-|+.+.++++.....|++- ...++.|+|||||
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~--------------~~~~~~i~GeSyg 181 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDL--------------RANDLFVVGESYG 181 (462)
T ss_pred cccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccc--------------cCCCEEEEeecch
Confidence 345567788899976 2 22221 1 1345667777778888777666421 1358999999999
Q ss_pred HHHHHHHHh
Q 001306 217 GFVARAAII 225 (1104)
Q Consensus 217 GiVAr~~l~ 225 (1104)
|.++..++.
T Consensus 182 G~y~p~~a~ 190 (462)
T PTZ00472 182 GHYAPATAY 190 (462)
T ss_pred hhhHHHHHH
Confidence 988877553
No 163
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=71.43 E-value=18 Score=41.33 Aligned_cols=80 Identities=16% Similarity=0.138 Sum_probs=43.9
Q ss_pred ceeEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCC
Q 001306 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P 227 (1104)
++-+.|.|+-+-.. -+| .+.++...++++++..-.+...- ..-.....++.++|||.||..|-+++.
T Consensus 73 GfIVVAPQl~~~~~-p~~---~~Ei~~aa~V~~WL~~gL~~~Lp-------~~V~~nl~klal~GHSrGGktAFAlAL-- 139 (307)
T PF07224_consen 73 GFIVVAPQLYTLFP-PDG---QDEIKSAASVINWLPEGLQHVLP-------ENVEANLSKLALSGHSRGGKTAFALAL-- 139 (307)
T ss_pred CeEEEechhhcccC-CCc---hHHHHHHHHHHHHHHhhhhhhCC-------CCcccccceEEEeecCCccHHHHHHHh--
Confidence 56667777776433 233 23444555555555322221110 011233679999999999998888654
Q ss_pred Ccc-cccccEEEEe
Q 001306 228 LLR-KSAVETVLTL 240 (1104)
Q Consensus 228 ~~~-~~~V~~IITL 240 (1104)
+|. .-...++|-+
T Consensus 140 g~a~~lkfsaLIGi 153 (307)
T PF07224_consen 140 GYATSLKFSALIGI 153 (307)
T ss_pred cccccCchhheecc
Confidence 331 2235566655
No 164
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=67.51 E-value=13 Score=43.87 Aligned_cols=51 Identities=22% Similarity=0.201 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh
Q 001306 167 ILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 167 tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~ 225 (1104)
-..|+..++...|.+++++ ..+.+.+ .+-++.+|-++|||.||.-++..+.
T Consensus 128 ~~~erp~dis~lLd~L~~~-~~sP~l~-------~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 128 EWWERPLDISALLDALLQL-TASPALA-------GRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred hhhcccccHHHHHHHHHHh-hcCcccc-------cccCccceEEEecccccHHHHHhcc
Confidence 3457777888888888766 3221111 2344789999999999999998774
No 165
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=67.35 E-value=30 Score=40.44 Aligned_cols=38 Identities=26% Similarity=0.380 Sum_probs=27.9
Q ss_pred CCceEEEEEEchhHHHHHHHHhC--CC-cccccccEEEEec
Q 001306 204 LPKSVILVGHSVGGFVARAAIIH--PL-LRKSAVETVLTLS 241 (1104)
Q Consensus 204 ~p~sViLVGHSMGGiVAr~~l~~--P~-~~~~~V~~IITLs 241 (1104)
++++|.|.|-|.||-+|..+... .+ .....++++|.+-
T Consensus 164 D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~ 204 (336)
T KOG1515|consen 164 DPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIY 204 (336)
T ss_pred CcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEe
Confidence 47889999999999877775531 11 2356789999985
No 166
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=66.56 E-value=11 Score=46.84 Aligned_cols=36 Identities=17% Similarity=0.325 Sum_probs=27.6
Q ss_pred CCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecC
Q 001306 203 SLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 203 ~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsT 242 (1104)
.+++++.+.|||+||+.+..++++.+ ..++.++...
T Consensus 470 ~d~~ri~i~G~SyGGymtl~~~~~~~----~f~a~~~~~~ 505 (620)
T COG1506 470 VDPERIGITGGSYGGYMTLLAATKTP----RFKAAVAVAG 505 (620)
T ss_pred cChHHeEEeccChHHHHHHHHHhcCc----hhheEEeccC
Confidence 34679999999999999999887532 3566666653
No 167
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=63.75 E-value=10 Score=41.45 Aligned_cols=21 Identities=29% Similarity=0.400 Sum_probs=18.6
Q ss_pred CceEEEEEEchhHHHHHHHHh
Q 001306 205 PKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~ 225 (1104)
..++||+|||=|+.+.+.++.
T Consensus 94 GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 94 GRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred CCCEEEEEeChHHHHHHHHHH
Confidence 458999999999999999885
No 168
>KOG3101 consensus Esterase D [General function prediction only]
Probab=60.37 E-value=5.9 Score=43.86 Aligned_cols=26 Identities=35% Similarity=0.431 Sum_probs=20.2
Q ss_pred CCCceEEEEEEchhHHHHHH-HHhCCC
Q 001306 203 SLPKSVILVGHSVGGFVARA-AIIHPL 228 (1104)
Q Consensus 203 ~~p~sViLVGHSMGGiVAr~-~l~~P~ 228 (1104)
.++.++-|.||||||.=|.. ++..|.
T Consensus 138 ld~~k~~IfGHSMGGhGAl~~~Lkn~~ 164 (283)
T KOG3101|consen 138 LDPLKVGIFGHSMGGHGALTIYLKNPS 164 (283)
T ss_pred ccchhcceeccccCCCceEEEEEcCcc
Confidence 44778999999999988877 556553
No 169
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=58.03 E-value=38 Score=38.40 Aligned_cols=81 Identities=23% Similarity=0.129 Sum_probs=52.6
Q ss_pred cceeEEEEeCCCCCCCc-chhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh
Q 001306 147 RRLDWFAVDLEGEHSAM-DGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 147 ~~lD~FaVDFnEE~SAf-~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~ 225 (1104)
+++-+.+-|..+-.+.+ +| ..++.-+-|+|+...++-.. .......++.++|||=||..+..+..
T Consensus 25 ~GyaVv~pDY~Glg~~y~~~---~~~a~avLD~vRAA~~~~~~-----------~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 25 RGYAVVAPDYEGLGTPYLNG---RSEAYAVLDAVRAARNLPPK-----------LGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred CCCEEEecCCCCCCCcccCc---HhHHHHHHHHHHHHHhcccc-----------cCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 47889999998866655 44 35556677777776554320 01223468999999999999887664
Q ss_pred -CCCccccc---ccEEEEec
Q 001306 226 -HPLLRKSA---VETVLTLS 241 (1104)
Q Consensus 226 -~P~~~~~~---V~~IITLs 241 (1104)
.++|.++. +.+.+..+
T Consensus 91 l~~~YApeL~~~l~Gaa~gg 110 (290)
T PF03583_consen 91 LAPSYAPELNRDLVGAAAGG 110 (290)
T ss_pred HhHHhCcccccceeEEeccC
Confidence 46665553 44555443
No 170
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=54.55 E-value=24 Score=42.22 Aligned_cols=72 Identities=19% Similarity=0.260 Sum_probs=43.1
Q ss_pred EEEeCCCCCCCcch-hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCc
Q 001306 152 FAVDLEGEHSAMDG-QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLL 229 (1104)
Q Consensus 152 FaVDFnEE~SAf~G-~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~ 229 (1104)
++++|.+......- +. .||-=+-.|+.++...+... ...-++|++|||-||++|...+. .|.
T Consensus 144 ls~tl~P~n~EYQN~GI--MqAiD~INAl~~l~k~~~~~-------------~~~lp~I~~G~s~G~yla~l~~k~aP~- 207 (403)
T PF11144_consen 144 LSCTLIPPNGEYQNFGI--MQAIDIINALLDLKKIFPKN-------------GGGLPKIYIGSSHGGYLAHLCAKIAPW- 207 (403)
T ss_pred EEEEecCCchhhhhhHH--HHHHHHHHHHHHHHHhhhcc-------------cCCCcEEEEecCcHHHHHHHHHhhCcc-
Confidence 56666653222211 23 34444555555665555421 11348999999999999999875 344
Q ss_pred ccccccEEEEecC
Q 001306 230 RKSAVETVLTLSS 242 (1104)
Q Consensus 230 ~~~~V~~IITLsT 242 (1104)
.+++||==|+
T Consensus 208 ---~~~~~iDns~ 217 (403)
T PF11144_consen 208 ---LFDGVIDNSS 217 (403)
T ss_pred ---ceeEEEecCc
Confidence 4777776553
No 171
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=52.32 E-value=13 Score=44.54 Aligned_cols=49 Identities=20% Similarity=0.301 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEec
Q 001306 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLS 241 (1104)
Q Consensus 175 Vn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLs 241 (1104)
+-+.|++||+.-+ .+++..||||-|+.+...++ ..|++ ..+|+..+.|+
T Consensus 147 LPA~IdyIL~~T~-----------------~~kl~yvGHSQGtt~~fv~lS~~p~~-~~kI~~~~aLA 196 (403)
T KOG2624|consen 147 LPAMIDYILEKTG-----------------QEKLHYVGHSQGTTTFFVMLSERPEY-NKKIKSFIALA 196 (403)
T ss_pred HHHHHHHHHHhcc-----------------ccceEEEEEEccchhheehhcccchh-hhhhheeeeec
Confidence 6677888875532 47999999999999999977 46776 47899999996
No 172
>PRK04940 hypothetical protein; Provisional
Probab=52.27 E-value=11 Score=40.38 Aligned_cols=20 Identities=20% Similarity=0.421 Sum_probs=17.7
Q ss_pred ceEEEEEEchhHHHHHHHHh
Q 001306 206 KSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 206 ~sViLVGHSMGGiVAr~~l~ 225 (1104)
+++.|||+||||.-|..+..
T Consensus 60 ~~~~liGSSLGGyyA~~La~ 79 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGF 79 (180)
T ss_pred CCcEEEEeChHHHHHHHHHH
Confidence 46899999999999998775
No 173
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=51.98 E-value=54 Score=35.11 Aligned_cols=39 Identities=13% Similarity=0.024 Sum_probs=22.2
Q ss_pred eEEEEEEchhHHHHHHHHhCCCc-----ccccccEEEEecCCCC
Q 001306 207 SVILVGHSVGGFVARAAIIHPLL-----RKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 207 sViLVGHSMGGiVAr~~l~~P~~-----~~~~V~~IITLsTPH~ 245 (1104)
-.-|+|.|.||.+|-.++.+-+. ....++-+|+++.+..
T Consensus 103 fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p 146 (212)
T PF03959_consen 103 FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPP 146 (212)
T ss_dssp -SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----
T ss_pred eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCC
Confidence 46799999999998886642110 1234688888875443
No 174
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=50.93 E-value=16 Score=44.23 Aligned_cols=65 Identities=23% Similarity=0.289 Sum_probs=47.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCC
Q 001306 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 166 ~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~ 245 (1104)
--|.||..-++-+=+.|-+- +.+|++|+|.|||.||..+..+...|.. .+.-+..|.++.+..
T Consensus 171 ~gl~Dq~~AL~wv~~~I~~F----------------GGdp~~vTl~G~saGa~~v~~l~~Sp~s-~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 171 LGLFDQLLALRWVKDNIPSF----------------GGDPKNVTLFGHSAGAASVSLLTLSPHS-RGLFHKAISMSGNAL 233 (545)
T ss_pred ccHHHHHHHHHHHHHHHHhc----------------CCCCCeEEEEeechhHHHHHHHhcCHhh-HHHHHHHHhhccccc
Confidence 34778887776555555211 2348999999999999999988876654 467788888887766
Q ss_pred CC
Q 001306 246 SP 247 (1104)
Q Consensus 246 ~p 247 (1104)
.+
T Consensus 234 ~~ 235 (545)
T KOG1516|consen 234 SP 235 (545)
T ss_pred cc
Confidence 54
No 175
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=50.80 E-value=52 Score=42.51 Aligned_cols=92 Identities=15% Similarity=0.054 Sum_probs=55.2
Q ss_pred cceeEEEEeCCCC-CCCcchhhH-HHHHHHHHHHHHHHHHHcccchhhhhhccccc-CCCCCceEEEEEEchhHHHHHHH
Q 001306 147 RRLDWFAVDLEGE-HSAMDGQIL-EEHAEYVVYAIHRILDQYRESQDAREREGAAT-SGSLPKSVILVGHSVGGFVARAA 223 (1104)
Q Consensus 147 ~~lD~FaVDFnEE-~SAf~G~tL-~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~-~~~~p~sViLVGHSMGGiVAr~~ 223 (1104)
+++.+..+|..+- .|.=...++ .++++=..++|+++...-.. .+.+.++.+. ..=-..+|-++|.||||.++..+
T Consensus 278 rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~--~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~a 355 (767)
T PRK05371 278 RGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATA--YTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAV 355 (767)
T ss_pred CCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCcc--ccccccccccccCCCCCeeEEEEEcHHHHHHHHH
Confidence 5899999999983 221111233 66777888999998642110 0000000000 01114699999999999999987
Q ss_pred HhCCCcccccccEEEEecCC
Q 001306 224 IIHPLLRKSAVETVLTLSSP 243 (1104)
Q Consensus 224 l~~P~~~~~~V~~IITLsTP 243 (1104)
+... +..+++||..++.
T Consensus 356 Aa~~---pp~LkAIVp~a~i 372 (767)
T PRK05371 356 ATTG---VEGLETIIPEAAI 372 (767)
T ss_pred HhhC---CCcceEEEeeCCC
Confidence 6521 2347888887654
No 176
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=49.59 E-value=91 Score=36.09 Aligned_cols=33 Identities=27% Similarity=0.152 Sum_probs=24.5
Q ss_pred CCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEe
Q 001306 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTL 240 (1104)
Q Consensus 204 ~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITL 240 (1104)
++++|.+.|+|.||..|..++.+. .+|+.++..
T Consensus 173 D~~rI~v~G~SqGG~lal~~aaLd----~rv~~~~~~ 205 (320)
T PF05448_consen 173 DGKRIGVTGGSQGGGLALAAAALD----PRVKAAAAD 205 (320)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHHS----ST-SEEEEE
T ss_pred CcceEEEEeecCchHHHHHHHHhC----ccccEEEec
Confidence 367999999999999999977532 247766655
No 177
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=48.72 E-value=65 Score=35.52 Aligned_cols=80 Identities=21% Similarity=0.127 Sum_probs=53.5
Q ss_pred cceeEEEEeCCCCC-CCcchhh-HHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHH
Q 001306 147 RRLDWFAVDLEGEH-SAMDGQI-LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAI 224 (1104)
Q Consensus 147 ~~lD~FaVDFnEE~-SAf~G~t-L~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l 224 (1104)
+++-+..+|..+-. |.=.=.. ..++++=..++|+.|..+ .- ...+|-++|.|.+|..+..++
T Consensus 56 ~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Q-pw---------------s~G~VGm~G~SY~G~~q~~~A 119 (272)
T PF02129_consen 56 RGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQ-PW---------------SNGKVGMYGISYGGFTQWAAA 119 (272)
T ss_dssp TT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHC-TT---------------EEEEEEEEEETHHHHHHHHHH
T ss_pred CCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhC-CC---------------CCCeEEeeccCHHHHHHHHHH
Confidence 47889999999832 2100022 667888889999999654 21 135899999999999999987
Q ss_pred hCCCcccccccEEEEecCCCC
Q 001306 225 IHPLLRKSAVETVLTLSSPHQ 245 (1104)
Q Consensus 225 ~~P~~~~~~V~~IITLsTPH~ 245 (1104)
... +..+++|+...++..
T Consensus 120 ~~~---~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 120 ARR---PPHLKAIVPQSGWSD 137 (272)
T ss_dssp TTT----TTEEEEEEESE-SB
T ss_pred hcC---CCCceEEEecccCCc
Confidence 621 345899998875444
No 178
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=47.45 E-value=37 Score=41.57 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=34.3
Q ss_pred CCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCC
Q 001306 204 LPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPH 244 (1104)
Q Consensus 204 ~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH 244 (1104)
+|+.|+|.|+|.||..+..++..|.. .+..+..|++|-+.
T Consensus 178 Dp~NVTl~GeSAGa~si~~Lla~P~A-kGLF~rAi~~Sg~~ 217 (491)
T COG2272 178 DPQNVTLFGESAGAASILTLLAVPSA-KGLFHRAIALSGAA 217 (491)
T ss_pred CccceEEeeccchHHHHHHhhcCccc-hHHHHHHHHhCCCC
Confidence 58999999999999999999998875 67788888988444
No 179
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=47.04 E-value=20 Score=41.23 Aligned_cols=36 Identities=33% Similarity=0.453 Sum_probs=23.8
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~ 246 (1104)
...++|-|||+||.+|-.+-..-+. -+|+..+|-..
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fgl------P~VaFesPGd~ 310 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRFGL------PVVAFESPGDA 310 (425)
T ss_pred CceEEEeccccchHHHHHhccccCC------ceEEecCchhh
Confidence 3589999999999998776542111 24556666543
No 180
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=47.04 E-value=20 Score=41.23 Aligned_cols=36 Identities=33% Similarity=0.453 Sum_probs=23.8
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~ 246 (1104)
...++|-|||+||.+|-.+-..-+. -+|+..+|-..
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~fgl------P~VaFesPGd~ 310 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRFGL------PVVAFESPGDA 310 (425)
T ss_pred CceEEEeccccchHHHHHhccccCC------ceEEecCchhh
Confidence 3589999999999998776542111 24556666543
No 181
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=46.63 E-value=54 Score=36.18 Aligned_cols=72 Identities=19% Similarity=0.247 Sum_probs=51.9
Q ss_pred ceeEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCC
Q 001306 148 RLDWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHP 227 (1104)
Q Consensus 148 ~lD~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P 227 (1104)
.+|.+-+|.+... +...+..-++++...|++-.+ .+.+++++.+-|-||||.+|..+..
T Consensus 54 Wfd~~~~~~~~~~---d~~~~~~aa~~i~~Li~~e~~----------------~Gi~~~rI~igGfs~G~a~aL~~~~-- 112 (206)
T KOG2112|consen 54 WFDIMELSSDAPE---DEEGLHRAADNIANLIDNEPA----------------NGIPSNRIGIGGFSQGGALALYSAL-- 112 (206)
T ss_pred eecceeeCcccch---hhhHHHHHHHHHHHHHHHHHH----------------cCCCccceeEcccCchHHHHHHHHh--
Confidence 6777777777644 666677778888888876432 2456789999999999999999664
Q ss_pred CcccccccEEEEec
Q 001306 228 LLRKSAVETVLTLS 241 (1104)
Q Consensus 228 ~~~~~~V~~IITLs 241 (1104)
.| +..+.+++.++
T Consensus 113 ~~-~~~l~G~~~~s 125 (206)
T KOG2112|consen 113 TY-PKALGGIFALS 125 (206)
T ss_pred cc-ccccceeeccc
Confidence 12 34577777775
No 182
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=45.80 E-value=4.9 Score=47.69 Aligned_cols=41 Identities=41% Similarity=0.548 Sum_probs=29.9
Q ss_pred CceEEEEEEchhHHHHHHHHh-----CCCccccc--ccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAII-----HPLLRKSA--VETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~-----~P~~~~~~--V~~IITLsTPH~~ 246 (1104)
.+.+-.||||.||.+||.+.. .|.. -.. ...-+|++||+.+
T Consensus 149 i~kISfvghSLGGLvar~AIgyly~~~~~~-f~~v~p~~fitlasp~~g 196 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIGYLYEKAPDF-FSDVEPVNFITLASPKLG 196 (405)
T ss_pred cceeeeeeeecCCeeeeEEEEeeccccccc-ccccCcchhhhhcCCCcc
Confidence 468999999999999999763 1221 122 3477899999975
No 183
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=45.22 E-value=38 Score=39.20 Aligned_cols=114 Identities=20% Similarity=0.106 Sum_probs=59.0
Q ss_pred CceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEecCCCCCCCcccCcchHHHHHHHHHHHHhcccCCCCCCCccccC
Q 001306 205 PKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARVNDEWRKGYEAHTTPTGHHVSN 283 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLsTPH~~pPvafD~~l~~fY~~vn~~W~~~~~~~~s~~~~~~~~ 283 (1104)
+..=+|.|-||||.+|..+. .+|+ +.-.|++.| |+-. +......=+..+..|.+.+..
T Consensus 176 a~~r~L~G~SlGG~vsL~agl~~Pe----~FG~V~s~S-ps~~-----~~~~~~~~~~~~~~~l~~~~a----------- 234 (299)
T COG2382 176 ADGRVLAGDSLGGLVSLYAGLRHPE----RFGHVLSQS-GSFW-----WTPLDTQPQGEVAESLKILHA----------- 234 (299)
T ss_pred CCCcEEeccccccHHHHHHHhcCch----hhceeeccC-Cccc-----cCccccccccchhhhhhhhhc-----------
Confidence 44568999999999999966 4554 466666654 3332 211111111111222222111
Q ss_pred CCCCcceEEEEecCCCCccccCCCccccCCCCCCcceeeeecccCceeecCCCchhhhhHHHHH
Q 001306 284 SRLSHVVVVSISAGYHDYQVRSKIESLDGIVPPTHGFMISSTGMKNVWLSMEHQAILWCNQLVV 347 (1104)
Q Consensus 284 ~~l~~V~LVSIaGG~rD~~VPsdlTsl~~lvP~t~g~tV~TTsIPgVWvs~DH~aIVWC~QLv~ 347 (1104)
.-.....++.+||..+..+++...--..+. ..|+...=. -++-+|....|-.-+..
T Consensus 235 -~~~~~~~~l~~g~~~~~~~~pNr~L~~~L~--~~g~~~~yr-----e~~GgHdw~~Wr~~l~~ 290 (299)
T COG2382 235 -IGTDERIVLTTGGEEGDFLRPNRALAAQLE--KKGIPYYYR-----EYPGGHDWAWWRPALAE 290 (299)
T ss_pred -cCccceEEeecCCccccccchhHHHHHHHH--hcCCcceee-----ecCCCCchhHhHHHHHH
Confidence 112345888899987777776543111110 112221111 24569999999655543
No 184
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=45.22 E-value=1e+02 Score=34.13 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=29.2
Q ss_pred CceEEEEEEchhHHHHHHHHhC----CCcccccccEEEEecCCCCC
Q 001306 205 PKSVILVGHSVGGFVARAAIIH----PLLRKSAVETVLTLSSPHQS 246 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~----P~~~~~~V~~IITLsTPH~~ 246 (1104)
..+++++|+|.|+.||..++.. +.-.. ..-..|+++-|.+-
T Consensus 47 ~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~-~~l~fVl~gnP~rp 91 (225)
T PF08237_consen 47 GGPVVVFGYSQGAVVASNVLRRLAADGDPPP-DDLSFVLIGNPRRP 91 (225)
T ss_pred CCCEEEEEECHHHHHHHHHHHHHHhcCCCCc-CceEEEEecCCCCC
Confidence 4679999999999998886641 21111 34479999988763
No 185
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=45.11 E-value=88 Score=36.06 Aligned_cols=88 Identities=19% Similarity=0.339 Sum_probs=53.7
Q ss_pred cceeEEEEeCCC--CCC-Ccch----hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhH-H
Q 001306 147 RRLDWFAVDLEG--EHS-AMDG----QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGG-F 218 (1104)
Q Consensus 147 ~~lD~FaVDFnE--E~S-Af~G----~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGG-i 218 (1104)
.++-++=||-++ |.. .+.. -+|++.||-+.+++++. + .++||-+|--.|+ +
T Consensus 54 ~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f----~-----------------lk~vIg~GvGAGAnI 112 (283)
T PF03096_consen 54 QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF----G-----------------LKSVIGFGVGAGANI 112 (283)
T ss_dssp TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHH----T--------------------EEEEEETHHHHH
T ss_pred hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhC----C-----------------ccEEEEEeeccchhh
Confidence 367888888886 222 2222 57999999988888876 2 5689999999999 5
Q ss_pred HHHHHHhCCCcccccccEEEEecCCCCCCCcccCcchHHHHHHHHH
Q 001306 219 VARAAIIHPLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARVND 264 (1104)
Q Consensus 219 VAr~~l~~P~~~~~~V~~IITLsTPH~~pPvafD~~l~~fY~~vn~ 264 (1104)
++|.++.+| ++|.++|+++.=-..+ +-++.+|.++..
T Consensus 113 L~rfAl~~p----~~V~GLiLvn~~~~~~-----gw~Ew~~~K~~~ 149 (283)
T PF03096_consen 113 LARFALKHP----ERVLGLILVNPTCTAA-----GWMEWFYQKLSS 149 (283)
T ss_dssp HHHHHHHSG----GGEEEEEEES---S--------HHHHHHHHHH-
T ss_pred hhhccccCc----cceeEEEEEecCCCCc-----cHHHHHHHHHhc
Confidence 677788766 4699999997333322 234566666643
No 186
>COG4099 Predicted peptidase [General function prediction only]
Probab=41.26 E-value=58 Score=38.04 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=43.6
Q ss_pred EEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcc
Q 001306 152 FAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLR 230 (1104)
Q Consensus 152 FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~ 230 (1104)
+|...++=+.+..-.+.....+-+.-+.+.+.+.|+- +..++.++|-||||.-+-+++. .|++
T Consensus 230 lAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynI---------------D~sRIYviGlSrG~~gt~al~~kfPdf- 293 (387)
T COG4099 230 LAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNI---------------DRSRIYVIGLSRGGFGTWALAEKFPDF- 293 (387)
T ss_pred EcccccccccccccccchhHHHHHHHHHHHHhhccCc---------------ccceEEEEeecCcchhhHHHHHhCchh-
Confidence 3444444333343344444444444444466777752 2468999999999999988774 4543
Q ss_pred cccccEEEEec
Q 001306 231 KSAVETVLTLS 241 (1104)
Q Consensus 231 ~~~V~~IITLs 241 (1104)
.++.+.++
T Consensus 294 ---FAaa~~ia 301 (387)
T COG4099 294 ---FAAAVPIA 301 (387)
T ss_pred ---hheeeeec
Confidence 67777665
No 187
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=38.15 E-value=75 Score=29.41 Aligned_cols=59 Identities=22% Similarity=0.222 Sum_probs=36.1
Q ss_pred cEEEecCCCCcHHHHHHHHHHHHHHhcCCCCcchhhhhhhhccccCCccccccccccccccccceeEEEEeCCC-CCCC-
Q 001306 85 PVLFIPGNAGSYKQVRSLAAESDRAYQGGPLEHSFYQEASLTLEEGGVNIDASIFHSSNQYTRRLDWFAVDLEG-EHSA- 162 (1104)
Q Consensus 85 PVLFIPGNAGSYkQvRSLAs~a~r~y~~~~~~~~~~~~~~l~p~~~~~~~e~~~~~~~~~~~~~lD~FaVDFnE-E~SA- 162 (1104)
-|+++||-++...--..+|..+.+ .++.+|+.|..+ +.|.
T Consensus 18 ~v~i~HG~~eh~~ry~~~a~~L~~--------------------------------------~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 18 VVVIVHGFGEHSGRYAHLAEFLAE--------------------------------------QGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHh--------------------------------------CCCEEEEECCCcCCCCCC
Confidence 466789998776655556654321 367999999998 4554
Q ss_pred cchhhHHHHHHHHHHHHHHH
Q 001306 163 MDGQILEEHAEYVVYAIHRI 182 (1104)
Q Consensus 163 f~G~tL~dQAeyVn~aI~~I 182 (1104)
..| .+..-.+||.|+.+.|
T Consensus 60 ~rg-~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 60 KRG-HIDSFDDYVDDLHQFI 78 (79)
T ss_pred ccc-ccCCHHHHHHHHHHHh
Confidence 222 2444445666655443
No 188
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=37.68 E-value=46 Score=37.68 Aligned_cols=23 Identities=35% Similarity=0.495 Sum_probs=16.9
Q ss_pred CceEEEEEEchhHHHHHHHHhCC
Q 001306 205 PKSVILVGHSVGGFVARAAIIHP 227 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P 227 (1104)
..+...|||||||-+.=.+.+++
T Consensus 104 ~~P~y~vgHS~GGqa~gL~~~~~ 126 (281)
T COG4757 104 GHPLYFVGHSFGGQALGLLGQHP 126 (281)
T ss_pred CCceEEeeccccceeecccccCc
Confidence 35788999999997655555544
No 189
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=34.86 E-value=89 Score=38.93 Aligned_cols=63 Identities=19% Similarity=0.301 Sum_probs=45.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEec
Q 001306 163 MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLS 241 (1104)
Q Consensus 163 f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLs 241 (1104)
.-|+||+|-++...+.++.+.++..+ ..+++|||-.-||..+..++. .| +.+..+|.-|
T Consensus 113 ~pgQTl~DV~~ae~~Fv~~V~~~hp~----------------~~kp~liGnCQgGWa~~mlAA~~P----d~~gplvlaG 172 (581)
T PF11339_consen 113 EPGQTLEDVMRAEAAFVEEVAERHPD----------------APKPNLIGNCQGGWAAMMLAALRP----DLVGPLVLAG 172 (581)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHhCCC----------------CCCceEEeccHHHHHHHHHHhcCc----CccCceeecC
Confidence 35678888777777777777555321 228999999999988888664 44 5688888888
Q ss_pred CCCC
Q 001306 242 SPHQ 245 (1104)
Q Consensus 242 TPH~ 245 (1104)
+|..
T Consensus 173 aPls 176 (581)
T PF11339_consen 173 APLS 176 (581)
T ss_pred CCcc
Confidence 6654
No 190
>COG0627 Predicted esterase [General function prediction only]
Probab=33.48 E-value=23 Score=40.96 Aligned_cols=22 Identities=36% Similarity=0.564 Sum_probs=17.7
Q ss_pred eEEEEEEchhHHHHHHHH-hCCC
Q 001306 207 SVILVGHSVGGFVARAAI-IHPL 228 (1104)
Q Consensus 207 sViLVGHSMGGiVAr~~l-~~P~ 228 (1104)
.--++||||||.=|..++ .+|+
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd 175 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPD 175 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcc
Confidence 678999999999999854 5553
No 191
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=33.39 E-value=51 Score=39.91 Aligned_cols=53 Identities=26% Similarity=0.244 Sum_probs=36.3
Q ss_pred CceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEecCCCC-----CCCcccCcchHHHHHH
Q 001306 205 PKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLSSPHQ-----SPPLALQPSLGNYFAR 261 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLsTPH~-----~pPvafD~~l~~fY~~ 261 (1104)
..+||.+|-|.||++|--.- ..|. .|.+-+.-|+|.- .|+-.|+....+.|+.
T Consensus 166 ~~pvIafGGSYGGMLaAWfRlKYPH----iv~GAlAaSAPvl~f~d~vp~~~f~~ivT~~F~~ 224 (492)
T KOG2183|consen 166 ASPVIAFGGSYGGMLAAWFRLKYPH----IVLGALAASAPVLYFEDTVPKDVFYRIVTRDFKD 224 (492)
T ss_pred cCcEEEecCchhhHHHHHHHhcChh----hhhhhhhccCceEeecCCCCcchhhhHHHHHHHh
Confidence 56899999999999887654 4454 4777777777653 3555566555555544
No 192
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=30.89 E-value=1.6e+02 Score=32.98 Aligned_cols=49 Identities=8% Similarity=0.082 Sum_probs=32.1
Q ss_pred ccceeEEEEeCCCCCCC------cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEE
Q 001306 146 TRRLDWFAVDLEGEHSA------MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGH 213 (1104)
Q Consensus 146 ~~~lD~FaVDFnEE~SA------f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGH 213 (1104)
..++.++++|.+--... ..+..-.+|-+++.+.++.... ..++|+|+||
T Consensus 167 ~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~-------------------~~~~v~I~~H 221 (296)
T cd00842 167 KPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQ-------------------AGEKVWIIGH 221 (296)
T ss_pred CCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHH-------------------CCCeEEEEec
Confidence 34788999998753221 1223347899999888876421 1368999998
No 193
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=28.93 E-value=2.9e+02 Score=32.54 Aligned_cols=90 Identities=19% Similarity=0.261 Sum_probs=60.8
Q ss_pred ceeEEEEeCCC--CCC-Ccch----hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhH-HH
Q 001306 148 RLDWFAVDLEG--EHS-AMDG----QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGG-FV 219 (1104)
Q Consensus 148 ~lD~FaVDFnE--E~S-Af~G----~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGG-iV 219 (1104)
++-++-||-++ +.+ .|-. -+|++-|+-+-.++++. + -++||=+|--.|. ++
T Consensus 78 ~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f----~-----------------lk~vIg~GvGAGAyIL 136 (326)
T KOG2931|consen 78 HFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF----G-----------------LKSVIGMGVGAGAYIL 136 (326)
T ss_pred heEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhc----C-----------------cceEEEecccccHHHH
Confidence 46777777775 221 2332 47888888887777765 2 4689999999999 56
Q ss_pred HHHHHhCCCcccccccEEEEecCCCCCCCcccCcchHHHHHHHH-HHHH
Q 001306 220 ARAAIIHPLLRKSAVETVLTLSSPHQSPPLALQPSLGNYFARVN-DEWR 267 (1104)
Q Consensus 220 Ar~~l~~P~~~~~~V~~IITLsTPH~~pPvafD~~l~~fY~~vn-~~W~ 267 (1104)
+|.++.+|+ +|-++|+++.=-..+- -++.+|.+++ ++|+
T Consensus 137 ~rFAl~hp~----rV~GLvLIn~~~~a~g-----wiew~~~K~~s~~l~ 176 (326)
T KOG2931|consen 137 ARFALNHPE----RVLGLVLINCDPCAKG-----WIEWAYNKVSSNLLY 176 (326)
T ss_pred HHHHhcChh----heeEEEEEecCCCCch-----HHHHHHHHHHHHHHH
Confidence 777888764 6999999974333322 3566777764 5555
No 194
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=27.30 E-value=76 Score=40.09 Aligned_cols=69 Identities=25% Similarity=0.277 Sum_probs=43.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecC
Q 001306 163 MDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSS 242 (1104)
Q Consensus 163 f~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsT 242 (1104)
..|.-+..-+||...+.+++. .+ .+ ...+...|+|||.|||..||-..... |++.. |.++|.|+=
T Consensus 220 igG~nI~h~ae~~vSf~r~kv---le---i~-------gefpha~IiLvGrsmGAlVachVSps-nsdv~-V~~vVCigy 284 (784)
T KOG3253|consen 220 IGGANIKHAAEYSVSFDRYKV---LE---IT-------GEFPHAPIILVGRSMGALVACHVSPS-NSDVE-VDAVVCIGY 284 (784)
T ss_pred CCCcchHHHHHHHHHHhhhhh---hh---hh-------ccCCCCceEEEecccCceeeEEeccc-cCCce-EEEEEEecc
Confidence 344566666777766666442 21 11 12345799999999996665554432 33333 999999998
Q ss_pred CCCC
Q 001306 243 PHQS 246 (1104)
Q Consensus 243 PH~~ 246 (1104)
|...
T Consensus 285 pl~~ 288 (784)
T KOG3253|consen 285 PLDT 288 (784)
T ss_pred cccC
Confidence 7765
No 195
>COG0841 AcrB Cation/multidrug efflux pump [Defense mechanisms]
Probab=26.33 E-value=1.6e+02 Score=39.43 Aligned_cols=41 Identities=15% Similarity=0.142 Sum_probs=30.5
Q ss_pred EEEEeHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHhhc
Q 001306 711 SVSVSVTAAASRFLLLYGSQIAGLSV--AVVFFALMRQAYAWD 751 (1104)
Q Consensus 711 sl~is~~~sl~rL~lrYr~~i~afpv--aVi~lvL~~Qf~~y~ 751 (1104)
.++++|.|.....-.-......+|++ .+++++|.-||..|-
T Consensus 832 g~~~~~~G~~~~~~~s~~~~~~~~~lai~~v~lvL~~qfeS~~ 874 (1009)
T COG0841 832 GYTYEWSGESEQEKEAGGQALLLFALALLVVFLVLAAQYESFS 874 (1009)
T ss_pred ceEEEecchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 47888888888877766666655555 456789999998764
No 196
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=23.91 E-value=1.1e+02 Score=36.61 Aligned_cols=41 Identities=34% Similarity=0.423 Sum_probs=29.7
Q ss_pred CceEEEEEEchhHHHHHHHH-hCCCcccccccEEEEecCCCCCCCcc
Q 001306 205 PKSVILVGHSVGGFVARAAI-IHPLLRKSAVETVLTLSSPHQSPPLA 250 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l-~~P~~~~~~V~~IITLsTPH~~pPva 250 (1104)
++.++|.|.|.||.-+.-++ ..|+ |+++|+=+|=-+-=|++
T Consensus 310 ~edIilygWSIGGF~~~waAs~YPd-----VkavvLDAtFDDllpLA 351 (517)
T KOG1553|consen 310 QEDIILYGWSIGGFPVAWAASNYPD-----VKAVVLDATFDDLLPLA 351 (517)
T ss_pred ccceEEEEeecCCchHHHHhhcCCC-----ceEEEeecchhhhhhHH
Confidence 78999999999998776655 4454 89999877644433333
No 197
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.76 E-value=1.7e+02 Score=32.99 Aligned_cols=56 Identities=29% Similarity=0.301 Sum_probs=40.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEecCC
Q 001306 166 QILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLSSP 243 (1104)
Q Consensus 166 ~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLsTP 243 (1104)
++=.+.|+||-..+-.. ..+++|.+|.||.||.....++. .|. .++|-+|..-.+|
T Consensus 170 rt~veh~~yvw~~~v~p--------------------a~~~sv~vvahsyGG~~t~~l~~~f~~--d~~v~aialTDs~ 226 (297)
T KOG3967|consen 170 RTPVEHAKYVWKNIVLP--------------------AKAESVFVVAHSYGGSLTLDLVERFPD--DESVFAIALTDSA 226 (297)
T ss_pred cchHHHHHHHHHHHhcc--------------------cCcceEEEEEeccCChhHHHHHHhcCC--ccceEEEEeeccc
Confidence 56667788876655432 12689999999999988888664 454 3778888777766
No 198
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=22.16 E-value=2.8e+02 Score=30.36 Aligned_cols=35 Identities=0% Similarity=-0.032 Sum_probs=22.1
Q ss_pred ceeEEEEeCCCCCC-CcchhhHHHHHHHHHHHHHHH
Q 001306 148 RLDWFAVDLEGEHS-AMDGQILEEHAEYVVYAIHRI 182 (1104)
Q Consensus 148 ~lD~FaVDFnEE~S-Af~G~tL~dQAeyVn~aI~~I 182 (1104)
++.++++|-..... .-.|..-.+|.+++.+.++..
T Consensus 125 ~~~~i~lds~~~~~~~~~~~~~~~ql~WL~~~L~~~ 160 (262)
T cd07395 125 GVFFIVLNSQLFFDPSEVPELAQAQDVWLEEQLEIA 160 (262)
T ss_pred CEEEEEeccccccCccccccchHHHHHHHHHHHHHH
Confidence 56888888753211 112345688999988777643
No 199
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=22.02 E-value=1.7e+02 Score=34.76 Aligned_cols=45 Identities=24% Similarity=0.170 Sum_probs=29.5
Q ss_pred CceEEEEEEchhHHHHHHHHhCCCcccccccEEEEecCCCCCCCcccCc
Q 001306 205 PKSVILVGHSVGGFVARAAIIHPLLRKSAVETVLTLSSPHQSPPLALQP 253 (1104)
Q Consensus 205 p~sViLVGHSMGGiVAr~~l~~P~~~~~~V~~IITLsTPH~~pPvafD~ 253 (1104)
..++-+.|-||||.+|-.+... + +..|..+-.| +|+...++..++
T Consensus 174 ~~~~g~~G~SmGG~~A~laa~~--~-p~pv~~vp~l-s~~sAs~vFt~G 218 (348)
T PF09752_consen 174 YGPLGLTGISMGGHMAALAASN--W-PRPVALVPCL-SWSSASVVFTEG 218 (348)
T ss_pred CCceEEEEechhHhhHHhhhhc--C-CCceeEEEee-cccCCCcchhhh
Confidence 4589999999999999887762 2 2335555555 455555554443
No 200
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=21.89 E-value=1.1e+02 Score=38.88 Aligned_cols=43 Identities=21% Similarity=0.235 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCC
Q 001306 168 LEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPL 228 (1104)
Q Consensus 168 L~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~ 228 (1104)
++||.|=+ +++.++|. -.+..+|.+-|.|.||+++.+++. +|+
T Consensus 707 ~eDQVegl----q~Laeq~g--------------fidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 707 VEDQVEGL----QMLAEQTG--------------FIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred ehhhHHHH----HHHHHhcC--------------cccchheeEeccccccHHHHHHhhcCcc
Confidence 56777655 55555542 234679999999999999999774 565
No 201
>PF15383 TMEM237: Transmembrane protein 237
Probab=21.67 E-value=28 Score=39.26 Aligned_cols=63 Identities=25% Similarity=0.365 Sum_probs=44.2
Q ss_pred hhhHHhhhhhcccCCCCCccccccCCccccccchhhhhhhh--------hHHHHhhccccchhHHHHHHHHhhhhhhhhh
Q 001306 1011 VLCIGVILHGTVISKPEYNYLVSFPGILGQELRLNSIYLLA--------GYYSFLSGLALAPYRVFYAMAAIGVISLASK 1082 (1104)
Q Consensus 1011 ~~~~g~~~hg~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~~~~~~~~~~~p~~~~y~~~~~g~~~~~~~ 1082 (1104)
..|+|.+.||+++---=.+.+ ++|-++ ++-+|++.||+.=-+.||.+.+|+.+|+.=|
T Consensus 94 f~~~~~~~hG~LAG~al~h~i--------------~v~~l~~~~~~~~~~lL~~Y~~la~p~~~~fY~l~~is~VSafDr 159 (253)
T PF15383_consen 94 FRVIGLFCHGFLAGFALWHII--------------VVYVLAGYQLSTVSNLLSQYSPLAYPAQSLFYFLLAISTVSAFDR 159 (253)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--------------HHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 358999999998643333333 233333 4456777788877789999999999999887
Q ss_pred HHhhh
Q 001306 1083 IIKEK 1087 (1104)
Q Consensus 1083 ~~~~~ 1087 (1104)
+=-.|
T Consensus 160 ~dl~~ 164 (253)
T PF15383_consen 160 YDLAH 164 (253)
T ss_pred HHhhc
Confidence 65443
No 202
>PRK13751 putative mercuric transport protein; Provisional
Probab=21.34 E-value=1.1e+02 Score=31.19 Aligned_cols=27 Identities=30% Similarity=0.392 Sum_probs=22.6
Q ss_pred ccchhHHHHHHHHhhhhhhhhhHHhhh
Q 001306 1061 ALAPYRVFYAMAAIGVISLASKIIKEK 1087 (1104)
Q Consensus 1061 ~~~p~~~~y~~~~~g~~~~~~~~~~~~ 1087 (1104)
+|+|||.+....+++++.++.+-+.|+
T Consensus 46 ~lepyr~~fi~~a~~~l~~a~~~~yr~ 72 (116)
T PRK13751 46 VLEPYRPIFIGAALVALFFAWRRIYRP 72 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 789999999988888888887766654
No 203
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=21.12 E-value=2.2e+02 Score=31.60 Aligned_cols=46 Identities=17% Similarity=0.323 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh-CCCcccccccEEEEec
Q 001306 175 VVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII-HPLLRKSAVETVLTLS 241 (1104)
Q Consensus 175 Vn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~-~P~~~~~~V~~IITLs 241 (1104)
...|++++.+++.+ ....+|.|.|.|+.||..++. .|+ ....|.++
T Consensus 88 a~aaldW~~~~hp~----------------s~~~~l~GfSFGa~Ia~~la~r~~e-----~~~~is~~ 134 (210)
T COG2945 88 AAAALDWLQARHPD----------------SASCWLAGFSFGAYIAMQLAMRRPE-----ILVFISIL 134 (210)
T ss_pred HHHHHHHHHhhCCC----------------chhhhhcccchHHHHHHHHHHhccc-----ccceeecc
Confidence 45678888776542 234689999999999999775 333 56666665
No 204
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=20.15 E-value=1.6e+02 Score=35.19 Aligned_cols=59 Identities=20% Similarity=0.260 Sum_probs=39.3
Q ss_pred eEEEEeCCCCCCCcchhhHHHHHHHHHHHHHHHHHHcccchhhhhhcccccCCCCCceEEEEEEchhHHHHHHHHh
Q 001306 150 DWFAVDLEGEHSAMDGQILEEHAEYVVYAIHRILDQYRESQDAREREGAATSGSLPKSVILVGHSVGGFVARAAII 225 (1104)
Q Consensus 150 D~FaVDFnEE~SAf~G~tL~dQAeyVn~aI~~ILslY~~~~~~r~~~~~~~~~~~p~sViLVGHSMGGiVAr~~l~ 225 (1104)
.++.+|..=-.|.-+|...-.|..-+-++.+++.+.. ..+.|+|+|-|.||-+|..+++
T Consensus 156 SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~-----------------G~~nI~LmGDSAGGnL~Ls~Lq 214 (374)
T PF10340_consen 156 SILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESE-----------------GNKNIILMGDSAGGNLALSFLQ 214 (374)
T ss_pred eEEEEeccccccccCCCcCchHHHHHHHHHHHHHhcc-----------------CCCeEEEEecCccHHHHHHHHH
Confidence 5666666643333456566666666666666664211 1478999999999999998775
Done!