Your job contains 1 sequence.
>001311
MRKSSKKLFTSKHFLLEQESGFFFNMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKI
FFEIRKQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSK
YGDTKSARSIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPN
PDIKTLFVDHTCGQPNGARAPSPANNPLLGSLPKAGVFPPLGAHGPFQPTPAPVPTPLAG
WMSNPPTVTHPAVSGGAIGLGSPSIPAAALKHPRTPPTNPSVDYPSGDSDHLSKRTRPIG
ISDEINLPVNVLPVSFTGHSHSHSHSQAFSTPEDLPKTVTRTLNQGSSPMSMDFHPVQQT
LLLVGTNVGDIGLWEVGSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDG
SLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIK
VWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAP
GRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSI
DADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFENLAYDASRTSENSK
PTISPISAAAAAAATSAGLADRAASMVSIPGMNGDVRSLADVKPRITEESNDKSKVWKLT
ELSEPNQCRSLRLPENLRATKISRLIFTNSGNAILALASNAIHLLWKWQRTERNSSGKAT
ASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTM
ATFMPPPPAATFLAFHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSH
ALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHE
TQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCR
INPSAYLPAGVSSSNVHPLVIAAHPQEPNEFALGLSDGGVHVFEPLESEGKWGVPPPVDN
GSTSSMPATPPVGGSGSDQAQR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001311
(1102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2198888 - symbol:TPR1 "TOPLESS-related 1" spec... 4126 0. 1
TAIR|locus:2086770 - symbol:TPR2 "TOPLESS-related 2" spec... 3205 0. 1
TAIR|locus:2036204 - symbol:TPL "TOPLESS" species:3702 "A... 2466 0. 2
TAIR|locus:2040100 - symbol:AT2G25420 "AT2G25420" species... 604 1.2e-84 2
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 167 2.6e-12 2
FB|FBgn0036354 - symbol:Poc1 "Proteome of centrioles 1" s... 92 3.3e-10 3
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 126 5.0e-10 4
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 146 5.1e-10 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 143 5.9e-10 2
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 128 8.3e-10 2
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 128 1.2e-09 2
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 128 1.2e-09 2
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 128 1.2e-09 2
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 128 1.2e-09 2
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 128 1.2e-09 2
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 128 1.2e-09 2
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 99 1.9e-09 3
TAIR|locus:2043929 - symbol:AT2G43770 "AT2G43770" species... 111 3.6e-09 2
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 125 4.3e-09 2
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 176 4.5e-09 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 120 4.6e-09 3
SGD|S000000653 - symbol:PWP2 "Conserved 90S pre-ribosomal... 136 6.8e-09 2
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 122 8.4e-09 2
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 122 8.4e-09 2
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 133 9.0e-09 2
TAIR|locus:2172432 - symbol:AT5G43920 "AT5G43920" species... 102 1.1e-08 3
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 114 2.3e-08 2
CGD|CAL0005039 - symbol:orf19.3467 species:5476 "Candida ... 133 3.8e-08 2
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 154 4.6e-08 2
GENEDB_PFALCIPARUM|MAL8P1.43 - symbol:MAL8P1.43 "u5 snrnp... 103 5.8e-08 2
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 116 8.4e-08 2
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 114 1.0e-07 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 116 1.1e-07 2
UNIPROTKB|Q9NVX2 - symbol:NLE1 "Notchless protein homolog... 115 1.4e-07 2
MGI|MGI:2429770 - symbol:Nle1 "notchless homolog 1 (Droso... 114 1.7e-07 2
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 102 1.9e-07 3
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 109 1.9e-07 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 112 2.1e-07 2
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 109 2.3e-07 2
ZFIN|ZDB-GENE-000616-4 - symbol:apaf1 "apoptotic protease... 102 2.4e-07 3
WB|WBGene00003047 - symbol:lis-1 species:6239 "Caenorhabd... 132 2.6e-07 2
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 125 3.0e-07 3
UNIPROTKB|E1BR73 - symbol:APAF1 "Uncharacterized protein"... 118 3.3e-07 2
UNIPROTKB|F1P1P3 - symbol:APAF1 "Uncharacterized protein"... 118 3.4e-07 2
UNIPROTKB|Q58D20 - symbol:NLE1 "Notchless protein homolog... 111 3.7e-07 2
ZFIN|ZDB-GENE-040426-978 - symbol:snrnp40 "small nuclear ... 114 3.8e-07 3
ZFIN|ZDB-GENE-031118-54 - symbol:poc1b "POC1 centriolar p... 107 3.9e-07 2
WB|WBGene00015974 - symbol:C18E3.5 species:6239 "Caenorha... 103 6.6e-07 2
UNIPROTKB|F1NUL8 - symbol:WDR77 "Uncharacterized protein"... 109 6.8e-07 3
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 101 6.8e-07 2
DICTYBASE|DDB_G0282189 - symbol:tupA "transcriptional rep... 127 7.6e-07 3
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 106 7.6e-07 2
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 120 7.7e-07 3
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 109 7.8e-07 2
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 108 8.0e-07 2
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 94 8.1e-07 3
GENEDB_PFALCIPARUM|PFC0365w - symbol:PFC0365w "conserved ... 121 8.7e-07 2
UNIPROTKB|O77325 - symbol:PFC0365w "PRP19-like protein, p... 121 8.7e-07 2
UNIPROTKB|G4NFU5 - symbol:MGG_08708 "WD repeat-containing... 106 8.8e-07 3
WB|WBGene00020423 - symbol:prp-19 species:6239 "Caenorhab... 92 1.0e-06 4
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 128 1.2e-06 2
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 125 1.4e-06 2
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 105 1.7e-06 2
UNIPROTKB|Q6DIF4 - symbol:wdr1 "WD repeat-containing prot... 133 1.7e-06 3
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 105 1.7e-06 2
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 105 1.7e-06 2
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 105 1.7e-06 2
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 105 1.7e-06 2
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 117 1.7e-06 2
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 100 2.0e-06 3
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 98 2.1e-06 3
UNIPROTKB|E1BS49 - symbol:APAF1 "Uncharacterized protein"... 110 2.3e-06 2
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 125 2.5e-06 2
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 125 2.5e-06 2
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 125 2.5e-06 2
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 125 2.5e-06 2
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 125 2.5e-06 2
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 125 2.5e-06 2
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 125 2.5e-06 2
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 125 2.5e-06 2
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 125 2.5e-06 2
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 125 2.5e-06 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 105 2.5e-06 2
ASPGD|ASPL0000006005 - symbol:AN5972 species:162425 "Emer... 136 2.9e-06 2
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 99 3.1e-06 3
UNIPROTKB|G4MUL1 - symbol:MGG_07284 "Target-rapamycin com... 141 3.2e-06 3
UNIPROTKB|F1NII4 - symbol:NLE1 "Uncharacterized protein" ... 95 4.2e-06 3
TAIR|locus:2158232 - symbol:HOS15 "high expression of osm... 144 4.3e-06 1
CGD|CAL0000650 - symbol:orf19.2307 species:5476 "Candida ... 145 4.4e-06 3
UNIPROTKB|Q59WJ4 - symbol:PFS2 "Polyadenylation factor su... 145 4.4e-06 3
UNIPROTKB|G8JKX8 - symbol:COPB2 "Coatomer subunit beta'" ... 123 4.8e-06 2
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 110 5.4e-06 3
UNIPROTKB|E1C016 - symbol:COPB2 "Uncharacterized protein"... 123 5.4e-06 2
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 98 5.7e-06 2
MGI|MGI:1917493 - symbol:Wdr61 "WD repeat domain 61" spec... 90 5.8e-06 3
POMBASE|SPBC16C6.13c - symbol:sec27 "coatomer beta' subun... 131 5.9e-06 2
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 105 6.3e-06 2
POMBASE|SPBC713.04c - symbol:SPBC713.04c "U3 snoRNP-assoc... 119 7.0e-06 4
UNIPROTKB|J9JHP3 - symbol:APAF1 "Apoptotic protease-activ... 109 7.1e-06 2
ZFIN|ZDB-GENE-010724-7 - symbol:copb2 "coatomer protein c... 125 7.2e-06 2
WARNING: Descriptions of 168 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2198888 [details] [associations]
symbol:TPR1 "TOPLESS-related 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AC018849 EMBL:AC034256 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AK226879 IPI:IPI00542045 IPI:IPI00852338 PIR:G96836
RefSeq:NP_178164.3 RefSeq:NP_849913.2 UniGene:At.25188
ProteinModelPortal:Q0WV90 SMR:Q0WV90 DIP:DIP-59361N STRING:Q0WV90
PaxDb:Q0WV90 PRIDE:Q0WV90 EnsemblPlants:AT1G80490.2 GeneID:844388
KEGG:ath:AT1G80490 GeneFarm:3123 TAIR:At1g80490 InParanoid:Q0WV90
OMA:FMDATIC PhylomeDB:Q0WV90 Genevestigator:Q0WV90 Uniprot:Q0WV90
Length = 1120
Score = 4126 (1457.5 bits), Expect = 0., P = 0.
Identities = 807/1108 (72%), Positives = 900/1108 (81%)
Query: 16 LEQESGFFFNMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDK 75
LEQESGFFFNMKYFEDEVHNGNWD+VEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALD+
Sbjct: 28 LEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDR 87
Query: 76 HDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARSIMLVEL 135
HDR KAV+ILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSAR+IMLVEL
Sbjct: 88 HDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVEL 147
Query: 136 KKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHTCGQP 195
KKLIEANPLFRDKLQFP L+ SRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDH+C P
Sbjct: 148 KKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCRLP 207
Query: 196 NGARAPSPANNPLLGSLPKAGVFPPLGAHGXXXXXXXXXXXXLAGWMSNPPTVTHPAVSG 255
N ARAPSP NNPLLGSLPKA FPPLGAHG LAGWMS+P +V HPAVSG
Sbjct: 208 NDARAPSPVNNPLLGSLPKAEGFPPLGAHGPFQPTPSPVPTPLAGWMSSPSSVPHPAVSG 267
Query: 256 GAIGLGSPSIPAAALKHPRTPPTNPSVDYPSGDSDHLSKRTRPIGISDEINLPVNVLPVS 315
G I LG+PSI AA LKHPRTPP+N +VDYPSGDSDH+SKRTRP+GISDE++L VN+LP++
Sbjct: 268 GPIALGAPSIQAA-LKHPRTPPSNSAVDYPSGDSDHVSKRTRPMGISDEVSLGVNMLPMT 326
Query: 316 FTGXXXXXXXXQAFSTPEDLPKTVTRTLNQGSSPMSMDFHPVQQTLLLVGTNVGDIGLWE 375
F G Q F P+DLPKTV RTL+QGSSPMSMDFHP++QTLLLVGTNVGDIGLWE
Sbjct: 327 FPGQAHGHN--QTFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVGTNVGDIGLWE 384
Query: 376 VGSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIY 435
VGSRERLV + FKVWDL CSMPLQAALVK+P VSVNRVIWSPDGSLFGVAYSRHIVQ+Y
Sbjct: 385 VGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLY 444
Query: 436 SYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEG 495
SYHGG+++RQHLEIDAHVGGVNDIAFS PNKQLCV TCGDDKTIKVWDA G K+Y FEG
Sbjct: 445 SYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEG 504
Query: 496 HEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTR 555
HEAPVYS+CPH+KENIQFIFSTALDGKIKAWLYDN+GSRVDYEAPGRWCTTMAYSADGTR
Sbjct: 505 HEAPVYSICPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYEAPGRWCTTMAYSADGTR 564
Query: 556 TYQ-GFRKRSLG-VVQFDTTKNRFLAAGDDF---SIKFWDMDSVQ---LLTSIDADGGLP 607
+ G K +V+++ ++ F S+ D+ + L D
Sbjct: 565 LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFW 624
Query: 608 ASPRIRF----NKDGCLLA---VSTNDNGIKILATSDGIRLLRTFEN-----LAYDASR- 654
I+ + DG L A + N G +LA S +++ N L +
Sbjct: 625 DMDTIQLLTAIDADGGLQASPRIRFNKEG-SLLAVSANDNMIKVMANSDGLRLLHTVENL 683
Query: 655 TSENSKPTISPIXXXXXXXXXXXXXXXXXXXMVSIPGMNGDVRSLADVKPRITEESNDKS 714
+SE+SKP I+ I +VSIPGMNGD R++ DVKP ITEESNDKS
Sbjct: 684 SSESSKPAINSIPMVERPAS-----------VVSIPGMNGDSRNMVDVKPVITEESNDKS 732
Query: 715 KVWKLTELSEPNQCRSLRLPENLRATKISRLIFTNSGNAILALASNAIHLLWKWQRTERN 774
KVWKLTE+ EP+QCRSLRLPEN+R TKISRLIFTNSGNAILALASNAIHLLWKWQR +RN
Sbjct: 733 KVWKLTEVGEPSQCRSLRLPENMRVTKISRLIFTNSGNAILALASNAIHLLWKWQRNDRN 792
Query: 775 SSGKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGKISLFNX 834
++GKATAS+ PQ WQP SGI+MTNDV ++NPEEAVPCFALSKNDSYVMSASGGKISLFN
Sbjct: 793 ATGKATASLPPQQWQPASGILMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNM 852
Query: 835 XXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRIT 894
HPQDNNIIAIGMDDS+IQIYNVRVDEVKSKLKGHSKRIT
Sbjct: 853 MTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRIT 912
Query: 895 GLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIH 954
GLAFS+ LNVLVSSGAD+QLCVW++DGWEKQK++ LQIP GR+ ++ SDTRVQFHQDQ+H
Sbjct: 913 GLAFSNVLNVLVSSGADAQLCVWNTDGWEKQKSKVLQIPQGRSTSSLSDTRVQFHQDQVH 972
Query: 955 FLVVHETQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAAN 1014
FLVVHETQLAI+ETTKLEC+KQW RES+APITHATFSCDSQL+Y F+DAT+CVFS+AN
Sbjct: 973 FLVVHETQLAIYETTKLECMKQWPVRESAAPITHATFSCDSQLIYTSFMDATICVFSSAN 1032
Query: 1015 LKLRCRINPSAYLPAGVSSSNVHPLVIAAHPQEPNEFALGLSDGGVHVFEPLESEGKWGV 1074
L+LRCR+NPSAYLPA +S+SNVHPLVIAAHPQE N FA+GLSDGGVH+FEPLESEGKWGV
Sbjct: 1033 LRLRCRVNPSAYLPASLSNSNVHPLVIAAHPQESNMFAVGLSDGGVHIFEPLESEGKWGV 1092
Query: 1075 PPPVDNGSTSSMPATPPVGGSGSDQAQR 1102
PP +NGS S++ ATP VG S SDQ QR
Sbjct: 1093 APPPENGSASAVTATPSVGASASDQPQR 1120
>TAIR|locus:2086770 [details] [associations]
symbol:TPR2 "TOPLESS-related 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AB028608 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HSSP:P46680 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AY074277 IPI:IPI00523281 RefSeq:NP_188306.2 UniGene:At.24033
ProteinModelPortal:Q9LRZ0 SMR:Q9LRZ0 DIP:DIP-58586N STRING:Q9LRZ0
PaxDb:Q9LRZ0 PRIDE:Q9LRZ0 EnsemblPlants:AT3G16830.1 GeneID:820936
KEGG:ath:AT3G16830 GeneFarm:3122 TAIR:At3g16830 InParanoid:Q9LRZ0
OMA:KSARSIM PhylomeDB:Q9LRZ0 Genevestigator:Q9LRZ0 Uniprot:Q9LRZ0
Length = 1131
Score = 3205 (1133.3 bits), Expect = 0., P = 0.
Identities = 642/1106 (58%), Positives = 786/1106 (71%)
Query: 6 KKLFTSKHFLLEQESGFFFNMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIFFEIR 65
+K S H LEQESGFFFN+KYFE++ G WD+VEKYLSGFTKVDDNRYSMKIFFEIR
Sbjct: 19 EKFKESVH-KLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDNRYSMKIFFEIR 77
Query: 66 KQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTK 125
KQKYLEALD++DRAKAVEIL KDLKVF+TFNEEL+KEITQLLTLENFRENEQLSKYGDTK
Sbjct: 78 KQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENFRENEQLSKYGDTK 137
Query: 126 SARSIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKT 185
SARSIM ELKKLIEANPLFR+KL FP+ K SRLRTLINQSLNWQHQLCKNPRPNPDIKT
Sbjct: 138 SARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLNWQHQLCKNPRPNPDIKT 197
Query: 186 LFVDHTCGQPNGARAPSPANNPLLGSLPKAGVFPPLGAHGXXXXXXXX---XXXXLAGWM 242
LF+DH+C NGARA +P N P+ ++ + F PLG HG LAGWM
Sbjct: 198 LFLDHSCSPSNGARALTPVNLPV-AAVARPSNFVPLGVHGGPFQSNPAPAPNANALAGWM 256
Query: 243 SNP-PTVTHPAVSGGAIGLGSPSIPAAA--LKHPRTPPTNPSV-DYPSGDSDHLSKRTRP 298
+NP P+ + P SG P P+ LKHPR P + + DY S D + L KR R
Sbjct: 257 ANPNPSSSVP--SGVVAASPFPMQPSQVNELKHPRAPSNSLGLMDYQSADHEQLMKRLRS 314
Query: 299 IGISDEINLPVNVLPVSFTGXXXXXXXXQAFSTPEDLPKTVTRTLNQGSSPMSMDFHPVQ 358
S+E+ P + P + + +DLP+ V T+ QGS +SMDFHP
Sbjct: 315 AQTSNEVTYPAHSHPPA---------------SLDDLPRNVVSTIRQGSVVISMDFHPSH 359
Query: 359 QTLLLVGTNVGDIGLWEVGSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSP 418
TLL VG + G++ LWEVGSRE++V FK+W++ ACS+ Q ++VK+P +SV RV WSP
Sbjct: 360 HTLLAVGCSSGEVTLWEVGSREKVVTEPFKIWNMAACSVIFQGSIVKEPSISVTRVAWSP 419
Query: 419 DGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKT 478
DG+L GV++++H++ +Y+Y G D +RQHLEIDAHVG VND+AF+HPNKQ+CV+TCGDDK
Sbjct: 420 DGNLLGVSFTKHLIHVYAYQGSD-LRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDKL 478
Query: 479 IKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYE 538
IKVWD + G K + FEGHEAPVYS+CPH KENIQFIFSTALDGKIKAWLYDN+GSRVDY+
Sbjct: 479 IKVWDLS-GKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAWLYDNVGSRVDYD 537
Query: 539 APGRWCTTMAYSADGTR--------------------------TYQGFRKRSLGVVQFDT 572
APG+WCTTM YSADG+R TY GFRK+S GVVQFDT
Sbjct: 538 APGQWCTTMLYSADGSRLFSCGTSKEGDSFLVEWNESEGALKRTYLGFRKKSAGVVQFDT 597
Query: 573 TKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
T+NRFLA G+D IKFW+MD+ LLT ++A+GGLP PR+RFNKDG LLAV+T DNG KI
Sbjct: 598 TRNRFLAVGEDNQIKFWNMDNTNLLTVVEAEGGLPNLPRLRFNKDGNLLAVTTADNGFKI 657
Query: 633 LATSDGIRLLRTFENLAYDASRTSENSKPTISPIXXXXXXXXXXXXXXXXXXXMVSIPGM 692
LA +DG+R LR FE +++AS+ S + K + S + P
Sbjct: 658 LANTDGLRTLRAFEARSFEASKASIDMKVSTSAMASSISPAIGKIEHMDAGSPARPTPIP 717
Query: 693 NG-DVRSLADVKPRITEESNDKSKVWKLTELSEPNQCRSLRLPENLRA-TKISRLIFTNS 750
NG + S KPR +S DKSK +LTE+ +P QCR + +P++ + +K++RL++TNS
Sbjct: 718 NGIEAMSRTMEKPR-NLDSVDKSKPLELTEIVDPTQCRQVTMPDSKDSVSKVARLLYTNS 776
Query: 751 GNAILALASNAIHLLWKWQRTERNSSGKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVP 810
G +LAL SN + LWKW R E+N +GKATASV PQ WQP SG++M NDV + NPE +VP
Sbjct: 777 GVGVLALGSNGVQRLWKWIRNEQNPTGKATASVTPQHWQPNSGLLMANDVPE-NPEGSVP 835
Query: 811 CFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDS 870
C ALSKNDSYVMSA GGK+SLFN HPQDNNIIAIGM+DS
Sbjct: 836 CIALSKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDS 895
Query: 871 SIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFL 930
SI IYNVRVDEVK+KLKGH K ITGLAFS ALN+LVSSGAD+QL W++D WEK+K+ +
Sbjct: 896 SIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAI 955
Query: 931 QIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWVPRES-SAPITHA 989
Q+P G+ P DTRVQFH DQI LV HETQLAI++ +K+EC+ +WVP+E+ S+PIT A
Sbjct: 956 QLPPGKAPVG--DTRVQFHNDQIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSA 1013
Query: 990 TFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGV-SSSNVHPLVIAAHPQEP 1048
++SC+SQLVYA F D + VF A +L+LRCRI PSAY+P +S+ + P VI AHPQEP
Sbjct: 1014 SYSCNSQLVYASFADGNIAVFDAESLRLRCRIAPSAYMPQPTPNSAPIFPQVITAHPQEP 1073
Query: 1049 NEFALGLSDGGVHVFEPLESEGKWGV 1074
N+ A+GLSDG V V EP E +WGV
Sbjct: 1074 NQLAVGLSDGSVKVIEPSELSRRWGV 1099
>TAIR|locus:2036204 [details] [associations]
symbol:TPL "TOPLESS" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010072 "primary shoot apical meristem
specification" evidence=IGI;IMP] [GO:0009733 "response to auxin
stimulus" evidence=IPI] [GO:0010051 "xylem and phloem pattern
formation" evidence=IGI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0009733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0010072 GO:GO:0010051 EMBL:AC034256 GO:GO:0009867
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 HSSP:P46680
EMBL:AY046013 EMBL:AY142619 IPI:IPI00520108 PIR:G86291
RefSeq:NP_001031050.1 RefSeq:NP_001031051.1 RefSeq:NP_563981.1
RefSeq:NP_849672.1 UniGene:At.48194 UniGene:At.69991
ProteinModelPortal:Q94AI7 SMR:Q94AI7 DIP:DIP-52391N IntAct:Q94AI7
STRING:Q94AI7 PaxDb:Q94AI7 PRIDE:Q94AI7 ProMEX:Q94AI7
EnsemblPlants:AT1G15750.1 EnsemblPlants:AT1G15750.2
EnsemblPlants:AT1G15750.3 EnsemblPlants:AT1G15750.4 GeneID:838144
KEGG:ath:AT1G15750 GeneFarm:2933 TAIR:At1g15750
HOGENOM:HOG000237725 InParanoid:Q94AI7 OMA:HADRSAN PhylomeDB:Q94AI7
ProtClustDB:CLSN2687817 Genevestigator:Q94AI7 Uniprot:Q94AI7
Length = 1131
Score = 2466 (873.1 bits), Expect = 0., Sum P(2) = 0.
Identities = 459/542 (84%), Positives = 492/542 (90%)
Query: 16 LEQESGFFFNMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDK 75
LEQESGFFFNMKYFEDEVHNGNWD+VEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDK
Sbjct: 28 LEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALDK 87
Query: 76 HDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARSIMLVEL 135
HDR KAV+ILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSAR+IMLVEL
Sbjct: 88 HDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARAIMLVEL 147
Query: 136 KKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHTCGQP 195
KKLIEANPLFRDKLQFP L+NSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDH+CG P
Sbjct: 148 KKLIEANPLFRDKLQFPTLRNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHSCGPP 207
Query: 196 NGARAPSPANNPLLGSLPKAGVFPPLGAHGXXXXXXXXXXXXLAGWMSNPPTVTHPAVSG 255
NGARAPSP NNPLLG +PKAG FPPLGAHG LAGWMS+P +V HPAVS
Sbjct: 208 NGARAPSPVNNPLLGGIPKAGGFPPLGAHGPFQPTASPVPTPLAGWMSSPSSVPHPAVSA 267
Query: 256 GAIGLGSPSIPAAALKHPRTPPTNPSVDYPSGDSDHLSKRTRPIGISDEINLPVNVLPVS 315
GAI LG PSIPAA LKHPRTPPTN S+DYPS DS+H+SKRTRP+GISDE+NL VN+LP+S
Sbjct: 268 GAIALGGPSIPAA-LKHPRTPPTNASLDYPSADSEHVSKRTRPMGISDEVNLGVNMLPMS 326
Query: 316 FTGXXXXXXXXQAFSTPEDLPKTVTRTLNQGSSPMSMDFHPVQQTLLLVGTNVGDIGLWE 375
F+G AF P+DLPKTV RTL+QGSSPMSMDFHP++QTLLLVGTNVGDIGLWE
Sbjct: 327 FSGQAHGHS--PAFKAPDDLPKTVARTLSQGSSPMSMDFHPIKQTLLLVGTNVGDIGLWE 384
Query: 376 VGSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIY 435
VGSRERLV + FKVWDL CSMPLQAALVK+P VSVNRVIWSPDGSLFGVAYSRHIVQ+Y
Sbjct: 385 VGSRERLVQKTFKVWDLSKCSMPLQAALVKEPVVSVNRVIWSPDGSLFGVAYSRHIVQLY 444
Query: 436 SYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEG 495
SYHGG+++RQHLEIDAHVGGVNDI+FS PNKQLCVITCGDDKTIKVWDA G K++ FEG
Sbjct: 445 SYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEG 504
Query: 496 HEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTR 555
HEAPVYSVCPH+KENIQFIFSTALDGKIKAWLYDN+GSRVDY+APGRWCTTMAYSADGTR
Sbjct: 505 HEAPVYSVCPHYKENIQFIFSTALDGKIKAWLYDNMGSRVDYDAPGRWCTTMAYSADGTR 564
Query: 556 TY 557
+
Sbjct: 565 LF 566
Score = 2147 (760.8 bits), Expect = 0., Sum P(2) = 0.
Identities = 411/548 (75%), Positives = 455/548 (83%)
Query: 555 RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRF 614
RTYQGF KRSLGVVQFDTTKNR+LAAGDDFSIKFWDMD+VQLLT+ID DGGL ASPRIRF
Sbjct: 590 RTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQLLTAIDGDGGLQASPRIRF 649
Query: 615 NKDGCLLAVSTNDNGIKILATSDGIRLLRTFENLAYDASRTSENSKPTISPIXXXXXXXX 674
NK+G LLAVS N+N IKI+A SDG+RLL TFEN++ SE+SKP I+ I
Sbjct: 650 NKEGSLLAVSGNENVIKIMANSDGLRLLHTFENIS------SESSKPAINSIAAAAAAAA 703
Query: 675 XXXXXXXXXXXMVSIPGMNGDVRSLADVKPRITEESNDKSKVWKLTELSEPNQCRSLRLP 734
+VSI GMNGD R++ DVKP ITEESNDKSK+WKLTE+SEP+QCRSLRLP
Sbjct: 704 TSAGHADRSANVVSIQGMNGDSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLP 763
Query: 735 ENLRATKISRLIFTNSGNAILALASNAIHLLWKWQRTERNSSGKATASVAPQLWQPPSGI 794
ENLR KISRLIFTNSGNAILALASNAIHLLWKWQR ERN++GKATAS+ PQ WQP SGI
Sbjct: 764 ENLRVAKISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPPQQWQPASGI 823
Query: 795 MMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXX 854
+MTNDV ++NPEEAVPCFALSKNDSYVMSASGGKISLFN
Sbjct: 824 LMTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLA 883
Query: 855 XHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
HPQDNNIIAIGMDDS+IQIYNVRVDEVKSKLKGHSKRITGLAFS+ LNVLVSSGAD+QL
Sbjct: 884 FHPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQL 943
Query: 915 CVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECV 974
CVW++DGWEKQ+++ L +P GR +A SDTRVQFHQDQ HFLVVHETQLAI+ETTKLEC+
Sbjct: 944 CVWNTDGWEKQRSKVLPLPQGRPNSAPSDTRVQFHQDQAHFLVVHETQLAIYETTKLECM 1003
Query: 975 KQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSS 1034
KQW RES APITHATFSCDSQLVYA F+DATVCVFS+ANL+LRCR+NPSAYLPA +S+S
Sbjct: 1004 KQWAVRESLAPITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLPASLSNS 1063
Query: 1035 NVHPLVIAAHPQEPNEFALGLSDGGVHVFEPLESEGKWGVPPPVDNGSTSSMPATPPVGG 1094
NVHPLVIAAHPQEPN FA+GLSDGGVH+FEPLESEGKWGV PP +NGS S P P VG
Sbjct: 1064 NVHPLVIAAHPQEPNMFAVGLSDGGVHIFEPLESEGKWGVAPPAENGSASGAPTAPSVGA 1123
Query: 1095 SGSDQAQR 1102
S SDQ QR
Sbjct: 1124 SASDQPQR 1131
Score = 46 (21.3 bits), Expect = 8.1e-225, Sum P(2) = 8.1e-225
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 568 VQFDTTKNRF--LAAGDDFSIKFWD 590
+ F T + + GDD +IK WD
Sbjct: 468 ISFSTPNKQLCVITCGDDKTIKVWD 492
Score = 43 (20.2 bits), Expect = 1.7e-224, Sum P(2) = 1.7e-224
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 471 ITCGDDKTIKVWD 483
+ GDD +IK WD
Sbjct: 613 LAAGDDFSIKFWD 625
>TAIR|locus:2040100 [details] [associations]
symbol:AT2G25420 "AT2G25420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010050 "vegetative phase change" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K14558
EMBL:AK226678 IPI:IPI00517803 RefSeq:NP_565594.3 UniGene:At.23385
ProteinModelPortal:Q0WVR3 SMR:Q0WVR3 STRING:Q0WVR3 PRIDE:Q0WVR3
EnsemblPlants:AT2G25420.1 GeneID:817080 KEGG:ath:AT2G25420
TAIR:At2g25420 eggNOG:NOG240498 HOGENOM:HOG000120706
InParanoid:Q0WVR3 OMA:STEWEVA PhylomeDB:Q0WVR3
ProtClustDB:CLSN2920575 Genevestigator:Q0WVR3 Uniprot:Q0WVR3
Length = 740
Score = 604 (217.7 bits), Expect = 1.2e-84, Sum P(2) = 1.2e-84
Identities = 139/374 (37%), Positives = 205/374 (54%)
Query: 718 KLTELSEPNQCRSLRLPENLRATKISRLIFTNSGNAILALASNAIHLLWKWQRTERNSSG 777
K E+ +P+QC +L LP+ KI+RL ++ SG+ ILALA +A H LW W ++ N
Sbjct: 368 KPNEIKDPSQCNALVLPDCFSEEKIARLTYSPSGDYILALAEDATHKLWTWSSSQ-NEFC 426
Query: 778 KATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGKISLFNXXXX 837
K P+L QP SG M N++ S +++ CFA+ SY+ S SGGKI++F+
Sbjct: 427 KENVYPKPRLHQPQSGKTMENEMATS-VQKSTSCFAVK--GSYLFSTSGGKIAVFDLKNF 483
Query: 838 XXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLA 897
P D ++A+G+DD SI I+ + +VK KL+GH ++IT LA
Sbjct: 484 EKVASFGSPTPMATYFIFIPGD--LLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLA 541
Query: 898 FSHALNVLVSSGADSQLCVWSSDGWEK--QKNRFLQIPTGRTPTAQS-DTRVQFHQDQIH 954
FS NVLVSS +D +LC+WS+ W K KN + + S T +QF QI
Sbjct: 542 FSRCFNVLVSSDSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFDPYQIE 601
Query: 955 FLVVHETQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAAN 1014
LVVH+ + ++E L+C QW+P S IT AT+S D +++Y F ++ + +
Sbjct: 602 LLVVHDGWIGLYEVRTLDCRLQWIPDASDPAITSATYSSDGEIIYVGFRCGSIKIVDSKT 661
Query: 1015 LKLRCRINPSAYLPAGVS--SSNVHPLVIAAHPQEPNEFALGLSDGGVHVFEPLESEGKW 1072
C+IN +++ S S V+P V+AAHP PN+ + GLS+G V V +PL S G W
Sbjct: 662 FMTLCQINLTSFTQLSTSNISLEVYPTVVAAHPSHPNQISAGLSNGKVIVLQPLWSGG-W 720
Query: 1073 GVPPPV-DNGSTSS 1085
G P+ DNG S+
Sbjct: 721 GEAAPLEDNGDYSN 734
Score = 278 (102.9 bits), Expect = 1.2e-84, Sum P(2) = 1.2e-84
Identities = 59/154 (38%), Positives = 91/154 (59%)
Query: 11 SKHFLLEQESGFFFNMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIFFEIRKQKYL 70
S H LLEQ+SG FF+ Y + + NGNW D + YLS FT + N +S K+FF + K K+
Sbjct: 27 SLH-LLEQDSGVFFDFSYLSNAILNGNWKDADDYLSAFTSPEANTFSRKMFFGLFKLKFS 85
Query: 71 EALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARSI 130
EA D+ ++AV+I KDL+ ++ F ++ +++ +++ R E+ D R+
Sbjct: 86 EAPDRSGGSEAVKIFSKDLRRIPVLKDDSFDDLVEVIAVDDMRIPEETCCV-DKAPGRAK 144
Query: 131 MLVELKKLIEANPLFRDKLQFPNLKNSRLRTLIN 164
+ V+L KL E+NP R KL FP+L S L LI+
Sbjct: 145 LCVDLHKLAESNPSLRGKLDFPSLNKSALLALIS 178
Score = 130 (50.8 bits), Expect = 4.8e-69, Sum P(2) = 4.8e-69
Identities = 42/161 (26%), Positives = 80/161 (49%)
Query: 43 KYLSGFTKVDDNRYSMKIFFEIRKQKYL-EALDKHDRAKAVEILVKDLK-VFSTFNEELF 100
KY + K++ K+FF + YL E + + KA E L + +++ +F
Sbjct: 207 KYKNTLHKLEQET---KVFFNLN---YLAEVMKLGEYGKAEEYLGAFTNWEDNKYSKAMF 260
Query: 101 KEITQLLTLENFRENEQLSKYG--DTKSARSIMLVELKKLIEANPLFRDKLQFPNLKNSR 158
E+ +L+ L++ E E + G D S + + + L + NP+ +D+L+FP+++ SR
Sbjct: 261 LELQKLICLQS-TEWEVATPSGSLDNMSLKIKLHASVAMLAKKNPVLKDELKFPSMEKSR 319
Query: 159 LRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHTCGQPNGAR 199
L TL+ Q+++W C N ++ V + CG P+ +
Sbjct: 320 LLTLVKQTMDWW--TCNNTSSLENVPV--VSYLCGTPSSMK 356
Score = 117 (46.2 bits), Expect = 1.1e-67, Sum P(2) = 1.1e-67
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 16 LEQESGFFFNMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEALD 74
LEQE+ FFN+ Y + + G + E+YL FT +DN+YS +F E++K L++ +
Sbjct: 215 LEQETKVFFNLNYLAEVMKLGEYGKAEEYLGAFTNWEDNKYSKAMFLELQKLICLQSTE 273
Score = 60 (26.2 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 45/192 (23%), Positives = 76/192 (39%)
Query: 384 LRNF-KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDE 442
L+NF KV G+ + P+ + PG + + DGS+F S V+ G D
Sbjct: 480 LKNFEKVASFGSPT-PMATYFIFIPGDLL--AVGLDDGSIFIHCLSSRKVK-EKLEGHD- 534
Query: 443 VRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYS 502
Q + A N + S + +LC+ + +K+ + N +++ +
Sbjct: 535 --QKITCLAFSRCFNVLVSSDSDGKLCLWST--KSWVKL-TSKNSTRKFCNRSNLESTSL 589
Query: 503 VCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDY--EAPGRWCTTMAYSADGTRTYQGF 560
V + Q DG I + L R+ + +A T+ YS+DG Y GF
Sbjct: 590 VTHIQFDPYQIELLVVHDGWIGLYEVRTLDCRLQWIPDASDPAITSATYSSDGEIIYVGF 649
Query: 561 RKRSLGVVQFDT 572
R S+ +V T
Sbjct: 650 RCGSIKIVDSKT 661
Score = 54 (24.1 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 37/193 (19%), Positives = 71/193 (36%)
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSR 534
DD +I + ++ + EGH+ + C + S+ DGK+ W +
Sbjct: 512 DDGSIFIHCLSSRKVKEKLEGHDQKI--TCLAFSRCFNVLVSSDSDGKLCLWSTKSWVKL 569
Query: 535 VDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSV 594
+ ++C + T+ +QFD + L D + I +++ ++
Sbjct: 570 TSKNSTRKFCNRSNLESTSLVTH----------IQFDPYQIELLVVHDGW-IGLYEVRTL 618
Query: 595 QLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRL----LRTFENLAY 650
D PA ++ DG ++ V IKI+ + + L L +F L+
Sbjct: 619 DCRLQWIPDASDPAITSATYSSDGEIIYVGFRCGSIKIVDSKTFMTLCQINLTSFTQLS- 677
Query: 651 DASRTSENSKPTI 663
S S PT+
Sbjct: 678 -TSNISLEVYPTV 689
Score = 40 (19.1 bits), Expect = 2.6e-20, Sum P(3) = 2.6e-20
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 334 DLPKTVTRTLNQGS-SPMSMDFHPVQQTLLLVGTNVGDIGLWEVGSRE 380
DL K + + GS +PM+ F + LL VG + G I + + SR+
Sbjct: 479 DL-KNFEKVASFGSPTPMATYFIFIPGDLLAVGLDDGSIFIHCLSSRK 525
Score = 37 (18.1 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 560 FRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQ 595
F + + + + + + LA +D + K W S Q
Sbjct: 387 FSEEKIARLTYSPSGDYILALAEDATHKLWTWSSSQ 422
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 167 (63.8 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 48/170 (28%), Positives = 83/170 (48%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
S++ V +SPDG A + ++I+ + G R ++ H G++DIA+S +K +C
Sbjct: 48 SISSVKFSPDGKWLASASADKTIKIWGAYDGKFERT---LEGHKEGISDIAWSQDSKLIC 104
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYD 529
+ DDKTIK+WD +G +GH+ V+ V + + N+ I S + D ++ W
Sbjct: 105 --SASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNL--IVSGSFDENVRIWDV- 159
Query: 530 NLGSRVDY-EAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFL 578
N G A T + ++ DGT G ++ + +DTT + L
Sbjct: 160 NTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRI--WDTTTGQLL 207
Score = 134 (52.2 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 45/165 (27%), Positives = 81/165 (49%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
QD+ +I DD +I+I++V ++ LKGH + + G++F+ N++VS D + +W
Sbjct: 98 QDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIW 157
Query: 918 SSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVV---HETQLAIFETTKLECV 974
+ E K I P T V F++D LVV ++ + I++TT + +
Sbjct: 158 DVNTGECTK----MISAHSDPV----TGVHFNRDGT--LVVSGSYDGTVRIWDTTTGQLL 207
Query: 975 KQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRC 1019
+ E ++ FS + + V A LD T+ ++S N K +C
Sbjct: 208 NT-ISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLWSYNNNK-KC 250
Score = 95 (38.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 35/150 (23%), Positives = 62/150 (41%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
+ K+WD+ + M +K V V ++P +L V+I+ + G+ +
Sbjct: 110 KTIKIWDVESGKM---VKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTK 166
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGD-DKTIKVWDATNGAKQYIF---EGHEAPV 500
I AH V + F N+ ++ G D T+++WD T G +G E
Sbjct: 167 M---ISAHSDPVTGVHF---NRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSF 220
Query: 501 YSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
P+ K F+ + LD ++ W Y+N
Sbjct: 221 VKFSPNGK----FVLAGTLDNTLRLWSYNN 246
Score = 93 (37.8 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 555 RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRF 614
+T +G ++ GV F+ N ++ D +++ WD+++ + I A P + + F
Sbjct: 124 KTLKGHKEYVFGV-SFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSD-PVTG-VHF 180
Query: 615 NKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
N+DG L+ + D ++I T+ G +LL T
Sbjct: 181 NRDGTLVVSGSYDGTVRIWDTTTG-QLLNT 209
Score = 75 (31.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGA---DSQLCVW 917
I G +D+ I IYN++ E+ L GH + +A H +++SGA D + +W
Sbjct: 276 IVTGSEDNLIYIYNLQTREIVQTLAGHEDVVLTVA-CHPTENIIASGALEKDRSVKIW 332
Score = 58 (25.5 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 604 GGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFE 646
G L + ++F+ DG LA ++ D IKI DG + RT E
Sbjct: 44 GHLKSISSVKFSPDGKWLASASADKTIKIWGAYDG-KFERTLE 85
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 92 (37.4 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 24/78 (30%), Positives = 39/78 (50%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V FD+T + L A DD S K W + Q ++S S + F+ +G L+A +++D
Sbjct: 108 VDFDSTGHLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAK--FSPNGKLVATASDD 165
Query: 628 NGIKILATSDGIRLLRTF 645
++I G +RTF
Sbjct: 166 KSVRIYDVDSG-ECVRTF 182
Score = 91 (37.1 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 22/75 (29%), Positives = 32/75 (42%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H GG+ + F Q+ T D T+ +W+ A+ F H APV V K N+
Sbjct: 17 HSGGITQLRFGPDGAQIA--TSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNL 74
Query: 512 QFIFSTALDGKIKAW 526
+ S D +K W
Sbjct: 75 --VASAGHDRTVKIW 87
Score = 90 (36.7 bits), Expect = 3.3e-10, Sum P(3) = 3.3e-10
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP + +++ G DD +I+I ++ L GH+ + +AFS + + G+D QL
Sbjct: 237 HPSGHFLLS-GSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLL 295
Query: 916 VWSSD 920
VW S+
Sbjct: 296 VWQSN 300
Score = 88 (36.0 bits), Expect = 8.8e-08, Sum P(3) = 8.8e-08
Identities = 33/163 (20%), Positives = 66/163 (40%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
+ ++ + PDG+ + + V +++ + + + + +H VN +A+S P L V
Sbjct: 21 ITQLRFGPDGAQIATSSTDSTVILWNLN---QAARCIRFASHSAPVNGVAWS-PKGNL-V 75
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGK-IKAWLYD 529
+ G D+T+K+W+ F H V SV ++ + TA D K K W
Sbjct: 76 ASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSV---DFDSTGHLMLTASDDKSAKIWRVA 132
Query: 530 NLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDT 572
+ W + +S +G +S+ + D+
Sbjct: 133 RRQFVSSFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDS 175
Score = 71 (30.1 bits), Expect = 4.3e-08, Sum P(3) = 4.3e-08
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 580 AGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGI 639
A DD S++ +D+DS + + + + P ++ ++ G +LAV+ N IKI S G
Sbjct: 162 ASDDKSVRIYDVDSGECVRTFTEERAAPR--QLAWHPWGNMLAVALGCNRIKIFDVS-GS 218
Query: 640 RLLRTF 645
+LL+ +
Sbjct: 219 QLLQLY 224
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 126 (49.4 bits), Expect = 5.0e-10, Sum P(4) = 5.0e-10
Identities = 45/183 (24%), Positives = 82/183 (44%)
Query: 15 LLEQESGFFFN---MKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLE 71
+LE+ESG + +K F +V +G WD K L D+ F + +QK+LE
Sbjct: 87 MLEEESGISLHNSTIKLFLQQVKDGKWDQSVKTLHRIGFPDEKAVKAASFL-LLEQKFLE 145
Query: 72 ALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARSIM 131
L A A+ L ++ + + + + L++ +F + + ++ ++RS +
Sbjct: 146 FLKVEKIADALRTLRNEMAPLRINTKRVHELASSLISPSSFISHTTSTPGKESVNSRSKV 205
Query: 132 LVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDIKTLFVDHT 191
L EL+ L+ A+ + +K RL L+ SL+ Q C +L+ DH
Sbjct: 206 LEELQTLLPASVIIPEK---------RLECLVENSLHIQRDSCVFHNTLDSDLSLYSDHQ 256
Query: 192 CGQ 194
CG+
Sbjct: 257 CGK 259
Score = 79 (32.9 bits), Expect = 5.0e-10, Sum P(4) = 5.0e-10
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVD-EVKSKLKGH--SKRITGLAFSHALNVLVSSGA-DSQL 914
DN I + + + I+++N+ D ++ S+ KGH S+ I F ++SG+ DSQ+
Sbjct: 454 DNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIASGSEDSQV 513
Query: 915 CVW 917
+W
Sbjct: 514 YIW 516
Score = 78 (32.5 bits), Expect = 6.3e-10, Sum P(4) = 6.3e-10
Identities = 19/72 (26%), Positives = 39/72 (54%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHA-LNVLVSSGADSQLCVWSSD- 920
IA G +DS + I++ ++ +L GH+ + +++S L++L S+ D + +W D
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
Query: 921 -GWEKQKNRFLQ 931
+ QK + +Q
Sbjct: 564 INQQNQKKKLVQ 575
Score = 75 (31.5 bits), Expect = 5.0e-10, Sum P(4) = 5.0e-10
Identities = 36/148 (24%), Positives = 66/148 (44%)
Query: 432 VQIYSYH--GGDEV-RQHLEI-DAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATN 486
+ +YS H G ++ Q +I ++H V + FSH K L + D+T +W+ + +
Sbjct: 249 LSLYSDHQCGKHQIPSQTAQILESHTDEVWFLQFSHNGKYLA--SSSKDQTAIIWEISAD 306
Query: 487 G--AKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVD-YEAPGRW 543
G + ++ GH PV ++ ++ Q + + + I+ W D+ G V YE G
Sbjct: 307 GHISLKHTLVGHHKPVIAIL-WSPDDRQ-VLTCGAEEVIRRWDVDS-GDCVHMYEKGGIS 363
Query: 544 CTTMAYSADGTRTYQGFRKRSLGVVQFD 571
+ + DG G RS+ + D
Sbjct: 364 PISCGWYPDGQGIIAGMTDRSICMWDLD 391
Score = 74 (31.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 433 QIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVW--DATNGAKQ 490
Q+Y +H + +E+ H G VN +++S N + + + DD TI++W D N Q
Sbjct: 512 QVYIWHRSTG-KLIVELPGHAGAVNCVSWSPTNLHM-LASASDDGTIRIWGLDRINQQNQ 569
Score = 66 (28.3 bits), Expect = 3.9e-09, Sum P(4) = 3.9e-09
Identities = 25/109 (22%), Positives = 53/109 (48%)
Query: 389 VWDLGACS-MPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
+W++ A + L+ LV V ++WSPD + +++ + GD V +
Sbjct: 300 IWEISADGHISLKHTLVGHHK-PVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYE 358
Query: 448 EIDAHVGGVNDIAFS-HPNKQLCVITCGDDKTIKVWDATNGAKQYIFEG 495
+ GG++ I+ +P+ Q +I D++I +WD +G ++ ++G
Sbjct: 359 K-----GGISPISCGWYPDGQ-GIIAGMTDRSICMWDL-DGREKECWKG 400
Score = 65 (27.9 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 16/69 (23%), Positives = 28/69 (40%)
Query: 466 KQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKA 525
KQ + + +D + +W + G GH V V N+ + S + DG I+
Sbjct: 500 KQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVS-WSPTNLHMLASASDDGTIRI 558
Query: 526 WLYDNLGSR 534
W D + +
Sbjct: 559 WGLDRINQQ 567
Score = 59 (25.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 886 LKGHSKRITGLAFSHALNVLVSSGADSQLCVW--SSDG 921
L+ H+ + L FSH L SS D +W S+DG
Sbjct: 270 LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADG 307
Score = 51 (23.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 17/70 (24%), Positives = 31/70 (44%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRV-DEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
P D ++ G ++ I+ ++V D V KG I+ + ++ D +C
Sbjct: 329 PDDRQVLTCGAEEV-IRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGM-TDRSIC 386
Query: 916 VWSSDGWEKQ 925
+W DG EK+
Sbjct: 387 MWDLDGREKE 396
Score = 49 (22.3 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGH-SKRITGLAFSHALNVLVSSGADSQL 914
+P IIA GM D SI ++++ E K KG +++++ +A + LVS DS +
Sbjct: 370 YPDGQGIIA-GMTDRSICMWDLDGRE-KECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVI 427
Query: 915 CVWSSD 920
++ +
Sbjct: 428 SLFDRE 433
Score = 49 (22.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 14/61 (22%), Positives = 27/61 (44%)
Query: 863 IAIGMDDSSIQIYNVRVD---EVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSS 919
+A D + I+ + D +K L GH K + + +S +++ GA+ + W
Sbjct: 289 LASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDV 348
Query: 920 D 920
D
Sbjct: 349 D 349
Score = 46 (21.3 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
Identities = 17/64 (26%), Positives = 27/64 (42%)
Query: 550 SADG----TRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGG 605
SADG T G K + ++ + + L G + I+ WD+DS + + G
Sbjct: 304 SADGHISLKHTLVGHHKPVIAIL-WSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGI 362
Query: 606 LPAS 609
P S
Sbjct: 363 SPIS 366
Score = 46 (21.3 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 564 SLGVVQFDTTKNRFLA-AGDDFSIKFWDMDSV 594
++ V + T LA A DD +I+ W +D +
Sbjct: 533 AVNCVSWSPTNLHMLASASDDGTIRIWGLDRI 564
Score = 42 (19.8 bits), Expect = 1.0e-06, Sum P(3) = 1.0e-06
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 686 MVSIPGMNGDVR--SLADVKPRITEESNDKS--KVWKLTELSEPNQCRSL 731
+V +PG G V S + + ++D ++W L +++ NQ + L
Sbjct: 524 IVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDRINQQNQKKKL 573
Score = 42 (19.8 bits), Expect = 2.1e-06, Sum P(4) = 2.1e-06
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 857 PQDNNIIAIGMDDSSIQIYNV-RVDEVKSKLK 887
P + +++A DD +I+I+ + R+++ K K
Sbjct: 541 PTNLHMLASASDDGTIRIWGLDRINQQNQKKK 572
Score = 37 (18.1 bits), Expect = 5.0e-10, Sum P(4) = 5.0e-10
Identities = 9/37 (24%), Positives = 21/37 (56%)
Query: 738 RATKISRLIFTNSGNAILALASNAIHLLWKWQRT-ER 773
R K+S + T+ G ++++ +++ L+ + T ER
Sbjct: 402 RTQKVSDIAMTDDGKWLVSVCKDSVISLFDREATVER 438
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 146 (56.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 47/167 (28%), Positives = 79/167 (47%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
R K+W A + LQ L + V V++S D L A V+I+ ++
Sbjct: 453 RTVKIWH--AATGSLQRTL-EGHNDWVRSVVFSHDSRLIASASDDMTVKIWDT-ATVPLQ 508
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC 504
+LE +H V + FSH ++ L + DD T+K+WD G+ + EGH+ V SV
Sbjct: 509 NNLE--SHDNWVRSVVFSHDSRLLA--SASDDMTVKIWDTATGSLENTLEGHDDRVNSVS 564
Query: 505 PHHKENIQFIFSTALDGKIKAWLYDNLGS-RVDYEAPGRWCTTMAYS 550
+ + + S + DG +K W Y G+ + ++ GR ++A+S
Sbjct: 565 --FSPDSRLLASASDDGTVKIW-YAATGTVQHTFDGSGRVAISLAFS 608
Score = 141 (54.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/139 (30%), Positives = 65/139 (46%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
K+WD ++PLQ L V V++S D L A V+I+ G + L
Sbjct: 498 KIWD--TATVPLQNNLESHDNW-VRSVVFSHDSRLLASASDDMTVKIWDTATGS-LENTL 553
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHH 507
E H VN ++FS P+ +L + + DD T+K+W A G Q+ F+G S+ H
Sbjct: 554 E--GHDDRVNSVSFS-PDSRL-LASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSH 609
Query: 508 KENIQFIFSTALDGKIKAW 526
N+ + S DG +K W
Sbjct: 610 TSNL--LASAMDDGTVKIW 626
Score = 133 (51.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 63/233 (27%), Positives = 102/233 (43%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYS 436
GS +R V ++W+ + L +D SV V ++ D A V+I+
Sbjct: 365 GSNDRTV----RIWET---TTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Query: 437 YHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGH 496
G Q++ ++ H VN ++FS P+ +L + + DD+T+K+W A G+ Q EGH
Sbjct: 418 TRTGS--LQNV-LEGHDDCVNSVSFS-PDSRL-LASASDDRTVKIWHAATGSLQRTLEGH 472
Query: 497 EAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRT 556
V SV H + I S + D +K W + + + E+ W ++ +S D +R
Sbjct: 473 NDWVRSVVFSHDSRL--IASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHD-SRL 529
Query: 557 YQGFRKRSLGVVQFDTTKNRF---LAAGDDF--SIKFWDMDSVQLLTSIDADG 604
+ V +DT L DD S+ F DS +LL S DG
Sbjct: 530 LAS-ASDDMTVKIWDTATGSLENTLEGHDDRVNSVSF-SPDS-RLLASASDDG 579
Score = 122 (48.0 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 52/270 (19%), Positives = 113/270 (41%)
Query: 775 SSGKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFN 833
+SG +V ++W+ +G++ T + E++V + + + + SAS GG + +++
Sbjct: 363 ASGSNDRTV--RIWETTTGLLRH---TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Query: 834 XXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRI 893
P D+ ++A DD +++I++ ++ L+GH+ +
Sbjct: 418 TRTGSLQNVLEGHDDCVNSVSFSP-DSRLLASASDDRTVKIWHAATGSLQRTLEGHNDWV 476
Query: 894 TGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQI 953
+ FSH ++ S+ D + +W + Q N R+ D+R+
Sbjct: 477 RSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDD 536
Query: 954 HFLVVHETQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAA 1013
+ + +T E T LE + +FS DS+L+ + D TV ++ AA
Sbjct: 537 MTVKIWDTATGSLENT-LE--------GHDDRVNSVSFSPDSRLLASASDDGTVKIWYAA 587
Query: 1014 NLKLRCRINPSAYLPAGVSSSNVHPLVIAA 1043
++ + S + ++ S+ L+ +A
Sbjct: 588 TGTVQHTFDGSGRVAISLAFSHTSNLLASA 617
Score = 121 (47.7 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 43/152 (28%), Positives = 67/152 (44%)
Query: 387 FKVWDL-GACSMPLQ---AALVKDPGV------SVNRVIWSPDGSLFGVAYSRHIVQIYS 436
F +W++ G PLQ +AL+ P +V V +S D L A V+I+
Sbjct: 232 FALWNISGIKCAPLQVYASALLFSPAQFKGHDRAVGSVSFSHDSRLLASASGDGTVKIW- 290
Query: 437 YHGGDEVRQHLE--IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFE 494
D L+ ++ H V + FSH ++ L + DD T+K+WD G Q + +
Sbjct: 291 ----DTATSFLQNTLEGHNEWVKSVVFSHDSRLLA--SASDDGTVKIWDTATGTLQRMLK 344
Query: 495 GHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
GH V SV H + I S + D ++ W
Sbjct: 345 GHNDSVRSVVFSHDSRL--IASGSNDRTVRIW 374
Score = 87 (35.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 17/62 (27%), Positives = 31/62 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D+ ++A DD +++I+ V+ G + LAFSH N+L S+ D + +W
Sbjct: 568 DSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAISLAFSHTSNLLASAMDDGTVKIWD 627
Query: 919 SD 920
+
Sbjct: 628 ME 629
Score = 83 (34.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 543 WCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDA 602
W T ++ + T +G + VV F +A DD ++K WD + L +
Sbjct: 290 WDTATSFLQN---TLEGHNEWVKSVV-FSHDSRLLASASDDGTVKIWDTATGTLQRMLKG 345
Query: 603 DGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFEN 647
S + F+ D L+A +ND ++I T+ G+ L TFE+
Sbjct: 346 HNDSVRS--VVFSHDSRLIASGSNDRTVRIWETTTGL-LRHTFED 387
Score = 79 (32.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 23/83 (27%), Positives = 41/83 (49%)
Query: 563 RSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
R++G V F +A D ++K WD + L +++ S + F+ D LLA
Sbjct: 264 RAVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKS--VVFSHDSRLLA 321
Query: 623 VSTNDNGIKILATSDGI--RLLR 643
+++D +KI T+ G R+L+
Sbjct: 322 SASDDGTVKIWDTATGTLQRMLK 344
Score = 74 (31.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 31/160 (19%), Positives = 63/160 (39%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D+ +IA G +D +++I+ ++ + H + ++F+H L S+ + +W
Sbjct: 358 DSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWD 417
Query: 919 SDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWV 978
+ Q + + D+R+ + + + T LE WV
Sbjct: 418 TRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRT-LEGHNDWV 476
Query: 979 PRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLR 1018
R FS DS+L+ + D TV ++ A + L+
Sbjct: 477 -RS-------VVFSHDSRLIASASDDMTVKIWDTATVPLQ 508
Score = 63 (27.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 20/77 (25%), Positives = 34/77 (44%)
Query: 556 TYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFN 615
T +G R + V F +A DD ++K W + + + D G + S + F+
Sbjct: 552 TLEGHDDR-VNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGSGRVAIS--LAFS 608
Query: 616 KDGCLLAVSTNDNGIKI 632
LLA + +D +KI
Sbjct: 609 HTSNLLASAMDDGTVKI 625
Score = 50 (22.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 11/55 (20%), Positives = 30/55 (54%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
+N++A MDD +++I+++ + ++ I + F +++ L+++ QL
Sbjct: 611 SNLLASAMDDGTVKIWDMEIYSLRHTFD-LDHEIQRIQFDKSMSSLITNVGRIQL 664
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 143 (55.4 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 66/241 (27%), Positives = 116/241 (48%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
+ V +SPDG L + ++++ G ++Q LE H V +AFS PN QL +
Sbjct: 44 IETVTFSPDGRLLASGSNDTTIKLWDPASGG-LKQTLE--GHSSSVQSVAFS-PNGQL-L 98
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWL--Y 528
+ D TIK+W++ + + ++ EGH V SV N Q +++ A+ G +K + +
Sbjct: 99 ASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVA--FSPNGQ-LWNPAI-GSLKHTIEGH 154
Query: 529 DNLGSRVDYEAPGRWCTTMAYSADGT-RTYQGFR---KRSLG-----VVQFDTTKN-RFL 578
+ V + G+ + SA+ T + + K +LG V+ + + R L
Sbjct: 155 SDWVLSVAFSPDGQLLASG--SAEKTIKLWDSATCGLKHTLGGHSNWVLPLVFSPDGRLL 212
Query: 579 AAG-DDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSD 637
A+G +D +IK WD S L +++ S + F+ +G LLA ++D IK+ T+
Sbjct: 213 ASGSNDATIKLWDPPSGSLKHTLEGHSNKIES--LAFSPNGQLLASGSSDATIKLWDTAT 270
Query: 638 G 638
G
Sbjct: 271 G 271
Score = 134 (52.2 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 57/209 (27%), Positives = 91/209 (43%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
++ H + + FS P+ +L + + +D TIK+WD +G + EGH + V SV
Sbjct: 37 LEGHSDWIETVTFS-PDGRL-LASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVA--FS 92
Query: 509 ENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGT----------RTYQ 558
N Q + S + D IK W + + E ++A+S +G T +
Sbjct: 93 PNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIE 152
Query: 559 GFRKRSLGVVQFDTTKNRFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKD 617
G L V F + + LA+G + +IK WD + L ++ P + F+ D
Sbjct: 153 GHSDWVLSVA-F-SPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNW-VLPLV-FSPD 208
Query: 618 GCLLAVSTNDNGIKILATSDGIRLLRTFE 646
G LLA +ND IK+ G L T E
Sbjct: 209 GRLLASGSNDATIKLWDPPSG-SLKHTLE 236
Score = 131 (51.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/150 (28%), Positives = 70/150 (46%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYS 436
GS E+ + K+WD C L+ L V +++SPDG L + ++++
Sbjct: 173 GSAEKTI----KLWDSATCG--LKHTLGGHSNW-VLPLVFSPDGRLLASGSNDATIKLWD 225
Query: 437 YHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGH 496
G +H ++ H + +AFS PN QL + + D TIK+WD G+ ++ +GH
Sbjct: 226 PPSGS--LKHT-LEGHSNKIESLAFS-PNGQL-LASGSSDATIKLWDTATGSFRHTLKGH 280
Query: 497 EAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
V SV + Q + S + D IK W
Sbjct: 281 SDMVLSVV--FSPDSQLLESGSGDNTIKLW 308
Score = 83 (34.3 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ ++A G D++I++++ + LKGHS + + FS +L S D+ + +W
Sbjct: 250 NGQLLASGSSDATIKLWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLW 308
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 128 (50.1 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+V+ V +SP+G + + +++I+ + G + I H G++D+A+S + L
Sbjct: 21 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLL- 76
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+K+WD ++G +GH V+ C + I S + D ++ W
Sbjct: 77 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIW 130
Score = 118 (46.6 bits), Expect = 0.00090, P = 0.00090
Identities = 43/204 (21%), Positives = 84/204 (41%)
Query: 807 EAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIG 866
+AV S N ++ S+S K+ D+N++
Sbjct: 20 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSA 79
Query: 867 MDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQK 926
DD +++I++V + LKGHS + F+ N++VS D + +W + K
Sbjct: 80 SDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK 139
Query: 927 NRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVV---HETQLAIFETTKLECVKQWVPRESS 983
+P P + V F++D L+V ++ I++T +C+K + + +
Sbjct: 140 T----LPAHSDPVSA----VHFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLID-DDN 188
Query: 984 APITHATFSCDSQLVYACFLDATV 1007
P++ FS + + + A LD T+
Sbjct: 189 PPVSFVKFSPNGKYILAATLDNTL 212
Score = 93 (37.8 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 35/156 (22%), Positives = 65/156 (41%)
Query: 372 GLWEVGSR-ERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRH 430
G W S ++L+ K+W GA + + + ++ V WS D +L A
Sbjct: 31 GEWLASSSADKLI----KIW--GAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDK 83
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
++I+ G ++ + H V F+ P L +++ D+++++WD G
Sbjct: 84 TLKIWDVSSGKCLKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCL 138
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H PV +V H + I S++ DG + W
Sbjct: 139 KTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLCRIW 172
Score = 92 (37.4 bits), Expect = 8.3e-10, Sum P(2) = 8.3e-10
Identities = 29/140 (20%), Positives = 57/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + D NP + F S N Y+++A+ + L++
Sbjct: 170 RIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYSKGKCLKTYT 227
Query: 845 XXXXXXXXXXXH--PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + I+N++ E+ KL+GH+ + A
Sbjct: 228 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 287
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + +W SD
Sbjct: 288 NIIASAALENDKTIKLWKSD 307
Score = 86 (35.3 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F+ N ++ D S++ WD+ + + L ++ A P S + FN+DG L+ S+ D
Sbjct: 111 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSA-VHFNRDGSLIVSSSYDGL 168
Query: 630 IKILATSDGIRLLRT 644
+I T+ G + L+T
Sbjct: 169 CRIWDTASG-QCLKT 182
Score = 76 (31.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + +++ D + WD S Q L ++ D P S ++F+ +G + +
Sbjct: 148 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAA 206
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G + L+T+
Sbjct: 207 TLDNTLKLWDYSKG-KCLKTY 226
Score = 76 (31.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 548 AYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
AY +T G K + V + + N ++A DD ++K WD+ S + L ++
Sbjct: 48 AYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 106
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
FN L+ + D ++I G + L+T
Sbjct: 107 FC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKT 140
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 128 (50.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+V+ V +SP+G + + +++I+ + G + I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+K+WD ++G +GH V+ C + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIW 156
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 51/244 (20%), Positives = 96/244 (39%)
Query: 767 KWQRTERNSSGKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG 826
K TE + A ++ A Q P T + +AV S N ++ S+S
Sbjct: 6 KKPETEAARAQPAPSAAATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
Query: 827 GKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKL 886
K+ D+N++ DD +++I++V + L
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 887 KGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRV 946
KGHS + F+ N++VS D + +W + K +P P + V
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT----LPAHSDPVSA----V 177
Query: 947 QFHQDQIHFLVV---HETQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFL 1003
F++D L+V ++ I++T +C+K + + + P++ FS + + + A L
Sbjct: 178 HFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATL 234
Query: 1004 DATV 1007
D T+
Sbjct: 235 DNTL 238
Score = 93 (37.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 35/156 (22%), Positives = 65/156 (41%)
Query: 372 GLWEVGSR-ERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRH 430
G W S ++L+ K+W GA + + + ++ V WS D +L A
Sbjct: 57 GEWLASSSADKLI----KIW--GAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
++I+ G ++ + H V F+ P L +++ D+++++WD G
Sbjct: 110 TLKIWDVSSGKCLKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCL 164
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H PV +V H + I S++ DG + W
Sbjct: 165 KTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLCRIW 198
Score = 92 (37.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/140 (20%), Positives = 57/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + D NP + F S N Y+++A+ + L++
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 845 XXXXXXXXXXXH--PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + I+N++ E+ KL+GH+ + A
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + +W SD
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
Score = 86 (35.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F+ N ++ D S++ WD+ + + L ++ A P S + FN+DG L+ S+ D
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSA-VHFNRDGSLIVSSSYDGL 194
Query: 630 IKILATSDGIRLLRT 644
+I T+ G + L+T
Sbjct: 195 CRIWDTASG-QCLKT 208
Score = 76 (31.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + +++ D + WD S Q L ++ D P S ++F+ +G + +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAA 232
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G + L+T+
Sbjct: 233 TLDNTLKLWDYSKG-KCLKTY 252
Score = 76 (31.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 548 AYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
AY +T G K + V + + N ++A DD ++K WD+ S + L ++
Sbjct: 74 AYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
FN L+ + D ++I G + L+T
Sbjct: 133 FC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKT 166
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 128 (50.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+V+ V +SP+G + + +++I+ + G + I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+K+WD ++G +GH V+ C + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIW 156
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 51/244 (20%), Positives = 96/244 (39%)
Query: 767 KWQRTERNSSGKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG 826
K TE + + +S Q P T T + +AV S N ++ S+S
Sbjct: 6 KKPETEASKTQSTPSSSNNQSKPAPVKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSA 65
Query: 827 GKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKL 886
K+ D+N++ DD +++I++V + L
Sbjct: 66 DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTL 125
Query: 887 KGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRV 946
KGHS + F+ N++VS D + +W + K +P P + V
Sbjct: 126 KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT----LPAHSDPVSA----V 177
Query: 947 QFHQDQIHFLVV---HETQLAIFETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFL 1003
F++D L+V ++ I++T +C+K + + + P++ FS + + + A L
Sbjct: 178 HFNRDGS--LIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAATL 234
Query: 1004 DATV 1007
D T+
Sbjct: 235 DNTL 238
Score = 93 (37.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 35/156 (22%), Positives = 65/156 (41%)
Query: 372 GLWEVGSR-ERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRH 430
G W S ++L+ K+W GA + + + ++ V WS D +L A
Sbjct: 57 GEWLASSSADKLI----KIW--GAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
++I+ G ++ + H V F+ P L +++ D+++++WD G
Sbjct: 110 TLKIWDVSSGKCLKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCL 164
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H PV +V H + I S++ DG + W
Sbjct: 165 KTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLCRIW 198
Score = 92 (37.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/140 (21%), Positives = 57/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + D NP + F S N Y+++A+ + L++
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 845 XXXXXXXXXXXH--PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + I+N++ EV KL+GH+ + A
Sbjct: 254 CHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTE 313
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + +W SD
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
Score = 86 (35.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F+ N ++ D S++ WD+ + + L ++ A P S + FN+DG L+ S+ D
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSA-VHFNRDGSLIVSSSYDGL 194
Query: 630 IKILATSDGIRLLRT 644
+I T+ G + L+T
Sbjct: 195 CRIWDTASG-QCLKT 208
Score = 76 (31.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + +++ D + WD S Q L ++ D P S ++F+ +G + +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAA 232
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G + L+T+
Sbjct: 233 TLDNTLKLWDYSKG-KCLKTY 252
Score = 76 (31.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 548 AYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
AY +T G K + V + + N ++A DD ++K WD+ S + L ++
Sbjct: 74 AYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
FN L+ + D ++I G + L+T
Sbjct: 133 FC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKT 166
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 128 (50.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+V+ V +SP+G + + +++I+ + G + I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+K+WD ++G +GH V+ C + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIW 156
Score = 93 (37.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 35/156 (22%), Positives = 65/156 (41%)
Query: 372 GLWEVGSR-ERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRH 430
G W S ++L+ K+W GA + + + ++ V WS D +L A
Sbjct: 57 GEWLASSSADKLI----KIW--GAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
++I+ G ++ + H V F+ P L +++ D+++++WD G
Sbjct: 110 TLKIWDVSSGKCLKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCL 164
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H PV +V H + I S++ DG + W
Sbjct: 165 KTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLCRIW 198
Score = 92 (37.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/140 (20%), Positives = 57/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + D NP + F S N Y+++A+ + L++
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 845 XXXXXXXXXXXH--PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + I+N++ E+ KL+GH+ + A
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + +W SD
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
Score = 86 (35.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F+ N ++ D S++ WD+ + + L ++ A P S + FN+DG L+ S+ D
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSA-VHFNRDGSLIVSSSYDGL 194
Query: 630 IKILATSDGIRLLRT 644
+I T+ G + L+T
Sbjct: 195 CRIWDTASG-QCLKT 208
Score = 76 (31.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + +++ D + WD S Q L ++ D P S ++F+ +G + +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAA 232
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G + L+T+
Sbjct: 233 TLDNTLKLWDYSKG-KCLKTY 252
Score = 76 (31.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 548 AYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
AY +T G K + V + + N ++A DD ++K WD+ S + L ++
Sbjct: 74 AYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
FN L+ + D ++I G + L+T
Sbjct: 133 FC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKT 166
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 128 (50.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+V+ V +SP+G + + +++I+ + G + I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+K+WD ++G +GH V+ C + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIW 156
Score = 93 (37.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 35/156 (22%), Positives = 65/156 (41%)
Query: 372 GLWEVGSR-ERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRH 430
G W S ++L+ K+W GA + + + ++ V WS D +L A
Sbjct: 57 GEWLASSSADKLI----KIW--GAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
++I+ G ++ + H V F+ P L +++ D+++++WD G
Sbjct: 110 TLKIWDVSSGKCLKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCL 164
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H PV +V H + I S++ DG + W
Sbjct: 165 KTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLCRIW 198
Score = 92 (37.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/140 (20%), Positives = 57/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + D NP + F S N Y+++A+ + L++
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 845 XXXXXXXXXXXH--PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + I+N++ E+ KL+GH+ + A
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + +W SD
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
Score = 86 (35.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F+ N ++ D S++ WD+ + + L ++ A P S + FN+DG L+ S+ D
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSA-VHFNRDGSLIVSSSYDGL 194
Query: 630 IKILATSDGIRLLRT 644
+I T+ G + L+T
Sbjct: 195 CRIWDTASG-QCLKT 208
Score = 76 (31.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + +++ D + WD S Q L ++ D P S ++F+ +G + +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAA 232
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G + L+T+
Sbjct: 233 TLDNTLKLWDYSKG-KCLKTY 252
Score = 76 (31.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 548 AYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
AY +T G K + V + + N ++A DD ++K WD+ S + L ++
Sbjct: 74 AYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
FN L+ + D ++I G + L+T
Sbjct: 133 FC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKT 166
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 128 (50.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+V+ V +SP+G + + +++I+ + G + I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+K+WD ++G +GH V+ C + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIW 156
Score = 93 (37.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 35/156 (22%), Positives = 65/156 (41%)
Query: 372 GLWEVGSR-ERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRH 430
G W S ++L+ K+W GA + + + ++ V WS D +L A
Sbjct: 57 GEWLASSSADKLI----KIW--GAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
++I+ G ++ + H V F+ P L +++ D+++++WD G
Sbjct: 110 TLKIWDVSSGKCLKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCL 164
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H PV +V H + I S++ DG + W
Sbjct: 165 KTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLCRIW 198
Score = 92 (37.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/140 (20%), Positives = 57/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + D NP + F S N Y+++A+ + L++
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 845 XXXXXXXXXXXH--PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + I+N++ E+ KL+GH+ + A
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + +W SD
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
Score = 86 (35.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F+ N ++ D S++ WD+ + + L ++ A P S + FN+DG L+ S+ D
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSA-VHFNRDGSLIVSSSYDGL 194
Query: 630 IKILATSDGIRLLRT 644
+I T+ G + L+T
Sbjct: 195 CRIWDTASG-QCLKT 208
Score = 76 (31.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + +++ D + WD S Q L ++ D P S ++F+ +G + +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAA 232
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G + L+T+
Sbjct: 233 TLDNTLKLWDYSKG-KCLKTY 252
Score = 76 (31.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 548 AYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
AY +T G K + V + + N ++A DD ++K WD+ S + L ++
Sbjct: 74 AYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
FN L+ + D ++I G + L+T
Sbjct: 133 FC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKT 166
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 128 (50.1 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+V+ V +SP+G + + +++I+ + G + I H G++D+A+S + L
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSNLL- 102
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+K+WD ++G +GH V+ C + I S + D ++ W
Sbjct: 103 -VSASDDKTLKIWDVSSGKCLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIW 156
Score = 93 (37.8 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 35/156 (22%), Positives = 65/156 (41%)
Query: 372 GLWEVGSR-ERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRH 430
G W S ++L+ K+W GA + + + ++ V WS D +L A
Sbjct: 57 GEWLASSSADKLI----KIW--GAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASDDK 109
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
++I+ G ++ + H V F+ P L +++ D+++++WD G
Sbjct: 110 TLKIWDVSSGKCLKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVKTGKCL 164
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H PV +V H + I S++ DG + W
Sbjct: 165 KTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLCRIW 198
Score = 92 (37.4 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 29/140 (20%), Positives = 57/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + D NP + F S N Y+++A+ + L++
Sbjct: 196 RIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYSKGKCLKTYT 253
Query: 845 XXXXXXXXXXXH--PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + I+N++ E+ KL+GH+ + A
Sbjct: 254 GHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE 313
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + +W SD
Sbjct: 314 NIIASAALENDKTIKLWKSD 333
Score = 86 (35.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F+ N ++ D S++ WD+ + + L ++ A P S + FN+DG L+ S+ D
Sbjct: 137 FNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-PVSA-VHFNRDGSLIVSSSYDGL 194
Query: 630 IKILATSDGIRLLRT 644
+I T+ G + L+T
Sbjct: 195 CRIWDTASG-QCLKT 208
Score = 76 (31.8 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + +++ D + WD S Q L ++ D P S ++F+ +G + +
Sbjct: 174 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAA 232
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G + L+T+
Sbjct: 233 TLDNTLKLWDYSKG-KCLKTY 252
Score = 76 (31.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 23/97 (23%), Positives = 41/97 (42%)
Query: 548 AYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
AY +T G K + V + + N ++A DD ++K WD+ S + L ++
Sbjct: 74 AYDGKFEKTISG-HKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYV 132
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
FN L+ + D ++I G + L+T
Sbjct: 133 FC--CNFNPQSNLIVSGSFDESVRIWDVKTG-KCLKT 166
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 99 (39.9 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N+++ DS+++I ++ + L GH + ++FS + + S+G+D Q+
Sbjct: 237 HPSGNHLLTAS-SDSTLKILDLLEGRLLYTLHGHQGSASCVSFSRSGDQFASAGSDQQVM 295
Query: 916 VWSSDGWEKQKNRFLQIPTG-RTPTAQS 942
VW ++ +R LQ RTP+AQ+
Sbjct: 296 VWRTNFDSVDYSRVLQQKRDHRTPSAQA 323
Score = 92 (37.4 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 33/119 (27%), Positives = 55/119 (46%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL--EIDAHVGGVNDIAFSHPNKQ 467
SV V +S DG A ++++S H RQ + + H V FS P+ Q
Sbjct: 104 SVRSVCFSADGQSLLTASDDQSIKLWSVH-----RQKIICTLREHNNWVRCARFS-PDGQ 157
Query: 468 LCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
L +++ DD+T+K+WDA++ +Q I E YS + I + + D ++ W
Sbjct: 158 L-MVSVSDDRTVKLWDASS--RQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVW 213
Score = 91 (37.1 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 26/103 (25%), Positives = 45/103 (43%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGD-DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN 510
H + + FS KQ I G D ++ VW+ ++ Y F GH+ V C +
Sbjct: 17 HRDAITSLDFSPSGKQ---IASGSVDASVMVWNMKPQSRAYRFTGHKDAV--TCVQFSPS 71
Query: 511 IQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADG 553
+ S++ D ++ W+ G V + A ++ +SADG
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADG 114
Score = 82 (33.9 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 25/102 (24%), Positives = 40/102 (39%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H V + FS P+ L + + DKT+++W + + +F H V SVC +
Sbjct: 59 HKDAVTCVQFS-PSAHL-LASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVC--FSADG 114
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADG 553
Q + + + D IK W W +S DG
Sbjct: 115 QSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDG 156
Score = 78 (32.5 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 21/76 (27%), Positives = 34/76 (44%)
Query: 451 AHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN 510
AH G V + FS + L +T DD++IK+W ++ I E + C +
Sbjct: 100 AHTGSVRSVCFSADGQSL--LTASDDQSIKLWSVHR--QKIICTLREHNNWVRCARFSPD 155
Query: 511 IQFIFSTALDGKIKAW 526
Q + S + D +K W
Sbjct: 156 GQLMVSVSDDRTVKLW 171
Score = 76 (31.8 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 569 QFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDN 628
+F ++ DD ++K WD S QL+ + GG S + F+ +A +++DN
Sbjct: 151 RFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGY--SSYVDFHPSSTCIATASSDN 208
Query: 629 GIKI 632
+++
Sbjct: 209 TVRV 212
Score = 72 (30.4 bits), Expect = 4.8e-09, Sum P(3) = 4.8e-09
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 564 SLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAV 623
S+ V F L A DD SIK W + +++ ++ R F+ DG L+
Sbjct: 104 SVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCAR--FSPDGQLMVS 161
Query: 624 STNDNGIKILATSDGIRLLRTF 645
++D +K+ S +L+ TF
Sbjct: 162 VSDDRTVKLWDASSR-QLIHTF 182
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 111 (44.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 32/147 (21%), Positives = 69/147 (46%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGW 922
I G D+ ++++++R E L+GH ITG++ S + L+++G D++LCVW +
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPY 254
Query: 923 EKQKNRFLQIPTGRTPTAQSDT-RVQFHQDQIHFLVVHETQLA-IFETTKLECVKQWVPR 980
Q NR ++I G + + + + D ++ I++TT + + +P
Sbjct: 255 APQ-NRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYK-LPG 312
Query: 981 ESSAPITHATFSCDSQLVYACFLDATV 1007
+ + + F ++ +C D +
Sbjct: 313 HTGS-VNECVFHPTEPIIGSCSSDKNI 338
Score = 106 (42.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 31/145 (21%), Positives = 64/145 (44%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
++P G+L +A H +I+ + + + + + H + D+ ++ Q +++
Sbjct: 61 FNPAGTL--IASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQ--IVSASP 116
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRV 535
DKT++ WD G + H + V S CP + I S + DG K W G+
Sbjct: 117 DKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRR-GPPLIISGSDDGTAKLWDMRQRGAIQ 175
Query: 536 DYEAPGRW-CTTMAYSADGTRTYQG 559
+ P ++ T +++S + + G
Sbjct: 176 TF--PDKYQITAVSFSDAADKIFTG 198
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 125 (49.1 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+V+ V +SP+G + + +++I+ + G + I H G++D+A+S ++ L
Sbjct: 74 AVSAVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKLGISDVAWSSDSRLL- 129
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+KVW+ + G +GH V+ C + I S + D ++ W
Sbjct: 130 -VSGSDDKTLKVWELSTGKSLKTLKGHSNYVF--CCNFNPQSNLIVSGSFDESVRIW 183
Score = 91 (37.1 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 30/140 (21%), Positives = 57/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + D NP + F S N Y+++A+ + L++
Sbjct: 223 RIWDTASGQCLKTLIDDDNPPVSFVKF--SPNGKYILAATLDNTLKLWDYSKGKCLKTYT 280
Query: 845 XXXXXXXXXXXH--PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + I+N++ EV KL+GH+ + A
Sbjct: 281 GHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTE 340
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + +W SD
Sbjct: 341 NIIASAALENDKTIKLWKSD 360
Score = 88 (36.0 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 33/156 (21%), Positives = 63/156 (40%)
Query: 372 GLWEVGSR-ERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRH 430
G W S ++L+ K+W GA + + + ++ V WS D L
Sbjct: 84 GEWLASSSADKLI----KIW--GAYDGKFEKT-ISGHKLGISDVAWSSDSRLLVSGSDDK 136
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
++++ G ++ + H V F+ P L +++ D+++++WD G
Sbjct: 137 TLKVWELSTGKSLKT---LKGHSNYVFCCNFN-PQSNL-IVSGSFDESVRIWDVRTGKCL 191
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H PV +V H + I S++ DG + W
Sbjct: 192 KTLPAHSDPVSAV--HFNRDGSLIVSSSYDGLCRIW 225
Score = 85 (35.0 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 22/75 (29%), Positives = 40/75 (53%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F+ N ++ D S++ WD+ + + L ++ A P S + FN+DG L+ S+ D
Sbjct: 164 FNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSD-PVSA-VHFNRDGSLIVSSSYDGL 221
Query: 630 IKILATSDGIRLLRT 644
+I T+ G + L+T
Sbjct: 222 CRIWDTASG-QCLKT 235
Score = 76 (31.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 21/81 (25%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + +++ D + WD S Q L ++ D P S ++F+ +G + +
Sbjct: 201 VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS-FVKFSPNGKYILAA 259
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G + L+T+
Sbjct: 260 TLDNTLKLWDYSKG-KCLKTY 279
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 176 (67.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 110/487 (22%), Positives = 191/487 (39%)
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKA-WLYDNLGSR 534
D T+K+WD G +GH V S+ FS DGK+ A YDN
Sbjct: 771 DDTVKIWDPATGELLQTLDGHSGTVESLA----------FSP--DGKLLASGSYDNT--- 815
Query: 535 VDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSV 594
+D W + + + +T++G S+ V F +A DD +IK WD+ +
Sbjct: 816 IDL-----WDSA---TGELLQTFEG-HPHSIWSVAFAPDGKELASASDDSTIKIWDLATG 866
Query: 595 QLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFENLAYDASR 654
+L ++D+ S + F+ DG LLA S+ D+ IK+ + G L ++ E +
Sbjct: 867 ELQQTLDSHSQSVRS--VAFSPDGKLLASSSLDSTIKVWNPATG-ELQQSLEGRSGWVKS 923
Query: 655 TSENSKPTISPIXXXXXXXXXXXXXXXXXXXMVSIPGMNGDVRSLA---DVKPRITEESN 711
+ + P + + ++ G + VRS+A D K + S+
Sbjct: 924 VAFS--PDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSD 981
Query: 712 DKSKVWKLT--ELSEPNQCRSLRLPENLRATKISRLIFTNSGNAI----LALA------- 758
K+W T EL + + L + + L+ + N I LA +
Sbjct: 982 TTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATSELQQSLE 1041
Query: 759 --SNAIHLLWKWQRTERNSSGKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSK 816
S ++H + ++ +S +++ +LW +G + T + V S
Sbjct: 1042 DHSRSVHAVAFSPDDKQLASSSLDSTI--KLWDSATGELQR---TLEGHSQGVRSVTFSP 1096
Query: 817 NDSYVMSAS-GGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIY 875
+ + S S G I L+N P D +A G DS+I+++
Sbjct: 1097 DGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSP-DGKQLASGYYDSTIKLW 1155
Query: 876 NVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTG 935
+ E+ L+GHS RI + FS L++SG+ Q ++ W+ LQI G
Sbjct: 1156 DSATGELLQTLEGHSDRIQSVVFSPD-GKLLASGSYDQ----TAKLWDPATGELLQIFEG 1210
Query: 936 RTPTAQS 942
+ +S
Sbjct: 1211 HSKWVES 1217
Score = 158 (60.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 49/178 (27%), Positives = 78/178 (43%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
K+WD + LQ L G +V + +SPDG L + + ++ G E+ Q
Sbjct: 775 KIWDPATGEL-LQT-LDGHSG-TVESLAFSPDGKLLASGSYDNTIDLWDSATG-ELLQTF 830
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHH 507
E H + +AF+ K+L + DD TIK+WD G Q + H V SV
Sbjct: 831 E--GHPHSIWSVAFAPDGKELA--SASDDSTIKIWDLATGELQQTLDSHSQSVRSVA--F 884
Query: 508 KENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSL 565
+ + + S++LD IK W + E W ++A+S DG + G K ++
Sbjct: 885 SPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTV 942
Score = 153 (58.9 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 78/264 (29%), Positives = 117/264 (44%)
Query: 411 VNRVIWSPDGS-LFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
V V++SPDG L +Y V+I+ G E+ Q L D H G V +AFS P+ +L
Sbjct: 753 VESVVFSPDGKQLVSGSYD-DTVKIWDPATG-ELLQTL--DGHSGTVESLAFS-PDGKL- 806
Query: 470 VITCGD-DKTIKVWDATNGAKQYIFEGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAW 526
+ G D TI +WD+ G FEGH ++SV P KE + S + D IK W
Sbjct: 807 -LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKE----LASASDDSTIKIW 861
Query: 527 ------LYDNLGSR------VDYEAPGRWCTTMAYSADGT---------RTYQGFRKRSL 565
L L S V + G+ + S D T Q RS
Sbjct: 862 DLATGELQQTLDSHSQSVRSVAFSPDGKLLASS--SLDSTIKVWNPATGELQQSLEGRSG 919
Query: 566 GV--VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPR-IRFNKDGCLLA 622
V V F + + + ++K W+ + +LL +++ G S R + F+ DG LA
Sbjct: 920 WVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLE---GHSQSVRSVAFSPDGKQLA 976
Query: 623 VSTNDNGIKILATSDGIRLLRTFE 646
S++D IK+ ++ G L +TF+
Sbjct: 977 SSSSDTTIKLWNSTTG-ELQQTFK 999
Score = 151 (58.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 52/175 (29%), Positives = 77/175 (44%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
K+WDL LQ L SV V +SPDG L + +++++ G E++Q L
Sbjct: 859 KIWDLATGE--LQQTL-DSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATG-ELQQSL 914
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDK-TIKVWDATNGAKQYIFEGHEAPVYSVC-- 504
E G V +AFS K+L G +K T+K+W+ G EGH V SV
Sbjct: 915 E--GRSGWVKSVAFSPDGKKLA---SGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFS 969
Query: 505 PHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQG 559
P K+ + S++ D IK W + ++ W +A+S DG G
Sbjct: 970 PDGKQ----LASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSG 1020
Score = 141 (54.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 100/464 (21%), Positives = 179/464 (38%)
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRV 535
D TI +WD+ G FEGH ++SV + + + S + D IK W
Sbjct: 813 DNTIDLWDSATGELLQTFEGHPHSIWSVA--FAPDGKELASASDDSTIKIW--------- 861
Query: 536 DYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGD-DFSIKFWDMDSV 594
D A G T+ + R+ V F + + LA+ D +IK W+ +
Sbjct: 862 DL-ATGELQQTLDSHSQSVRS-----------VAF-SPDGKLLASSSLDSTIKVWNPATG 908
Query: 595 QLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFENLAYDASR 654
+L S++ G S + F+ DG LA + N +K+ + G LL+T E + S
Sbjct: 909 ELQQSLEGRSGWVKS--VAFSPDGKKLASGSEKNTVKLWNPATG-ELLQTLEG--HSQSV 963
Query: 655 TSENSKPTISPIXXXXXXXXXXXXXXXXXXXMVSIPGMNGDVRSLA---DVKPRITEESN 711
S P + + G + +R++A D K ++ +
Sbjct: 964 RSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDD 1023
Query: 712 DKSKVWKL--TELSEPNQCRSLRLPENLRATKISRLIFTNSGNAILALASNAIHLLWKWQ 769
+ K+W L +EL + + S R + + + + ++S ++ + L +A L Q
Sbjct: 1024 NTIKLWDLATSELQQSLEDHS-RSVHAVAFSPDDKQLASSSLDSTIKLWDSATGEL---Q 1079
Query: 770 RT-ERNSSGKATASVAP--------------QLWQPPSGIMMTNDVTDSNPEEAVPCFAL 814
RT E +S G + + +P +LW P +G + T + + V A
Sbjct: 1080 RTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQ---TLTGRSDWVDSVAF 1136
Query: 815 SKNDSYVMSAS-GGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQ 873
S + + S I L++ P D ++A G D + +
Sbjct: 1137 SPDGKQLASGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSP-DGKLLASGSYDQTAK 1195
Query: 874 IYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+++ E+ +GHSK + +AFS +L SS + +W
Sbjct: 1196 LWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIKLW 1239
Score = 130 (50.8 bits), Expect = 0.00038, P = 0.00038
Identities = 64/235 (27%), Positives = 99/235 (42%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
K+WD + + LQ L + V V +SPDG L +++++ G E++Q L
Sbjct: 1069 KLWD--SATGELQRTL-EGHSQGVRSVTFSPDGKLLASNSYDGTIKLWNPLTG-ELQQTL 1124
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHH 507
V+ +AFS KQL + D TIK+WD+ G EGH + SV
Sbjct: 1125 T--GRSDWVDSVAFSPDGKQLA--SGYYDSTIKLWDSATGELLQTLEGHSDRIQSVV--F 1178
Query: 508 KENIQFIFSTALDGKIKAWLYDNLGSRVD-YEAPGRWCTTMAYSADG----TRTYQGFRK 562
+ + + S + D K W G + +E +W ++A+S DG + +Y K
Sbjct: 1179 SPDGKLLASGSYDQTAKLW-DPATGELLQIFEGHSKWVESVAFSPDGKLLASSSYGETIK 1237
Query: 563 -----------------RSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSI 600
S G V F NR LA+ D F K WD + +LL ++
Sbjct: 1238 LWDPVTGELLQTLNDPDESAGSVAFSPDGNR-LASVDIFDTKIWDPATGELLQAL 1291
Score = 126 (49.4 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 42/148 (28%), Positives = 69/148 (46%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
SV V +SPDG + S +++++ G E++Q + H + +AFS K L
Sbjct: 962 SVRSVAFSPDGKQLASSSSDTTIKLWNSTTG-ELQQTFK--GHDLWIRAVAFSPDGKHL- 1017
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAWL 527
++ DD TIK+WD Q E H V++V P K+ + S++LD IK W
Sbjct: 1018 -VSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ----LASSSLDSTIKLW- 1071
Query: 528 YDNLGSRVD--YEAPGRWCTTMAYSADG 553
D+ + E + ++ +S DG
Sbjct: 1072 -DSATGELQRTLEGHSQGVRSVTFSPDG 1098
Score = 65 (27.9 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 42/179 (23%), Positives = 70/179 (39%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXX 844
+LW P +G ++ S E+V A S + + S+S G+ I L++
Sbjct: 1195 KLWDPATGELLQIFEGHSKWVESV---AFSPDGKLLASSSYGETIKLWDPVTGELLQTLN 1251
Query: 845 XXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNV 904
P N + ++ + D+ +I++ E+ LKGHSK + +S
Sbjct: 1252 DPDESAGSVAFSPDGNRLASVDIFDT--KIWDPATGELLQALKGHSKWV----WSRT-GA 1304
Query: 905 LVSSGADSQLCVWSSDG-WEKQKNR-F-LQIPTGRTPTAQSDTRVQFHQDQIHFLVVHE 960
+S D LC+ W Q + F + + G S RV F Q FL+ E
Sbjct: 1305 GISIFLDQWLCLQEKRILWLPQSYQPFCISVNDGVLVLGHSSGRVSFIQGP-RFLIESE 1362
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 120 (47.3 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 46/199 (23%), Positives = 87/199 (43%)
Query: 330 STPEDLPKTVTRTL--NQGSSPMSMDFHPVQQTLLLVGTNVGDIGLWEVGSRERLVLRNF 387
S E + + +T+ N + P ++ F P LL G+ G I +W+ + + +
Sbjct: 207 SEEEQITTVLDKTIKFNNKNKPETIKFSP-DSKYLLTGSMDGFIEVWDYNTGKLSKSLAY 265
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
+ D ++ D + + +S DG + ++++ G +R+
Sbjct: 266 QSND---------DFMMHDDAILC--IAFSKDGEFLATGSLDNKIKVWQIKSGKCLRK-F 313
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHH 507
E AH GV + FS + Q +++ D ++K+ +G IF GH++ V C +H
Sbjct: 314 E-PAHTNGVTCLQFSRNSTQ--ILSGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNH 370
Query: 508 KENIQFIFSTALDGKIKAW 526
E+ + S + DGKIK W
Sbjct: 371 DEDR--VISCSSDGKIKIW 387
Score = 77 (32.2 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 20/115 (17%), Positives = 47/115 (40%)
Query: 814 LSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXX-XXHPQDNNIIAIGMDDSSI 872
L KN +++ + +IS+ + P N + A+ +D+ +
Sbjct: 417 LLKNPEFLLVCNSSQISIVSMKSQTISKTFTSENSKTFLVCTLSPLQNYLYAVD-EDNIL 475
Query: 873 QIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKN 927
++ + +K K H + + ++ N+L ++G+D L +W S+ + N
Sbjct: 476 YTFDFNSGSLLNKFKIHDQEVISISHHPTKNLLATTGSDCLLKIWKSNSNDNINN 530
Score = 75 (31.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDA 484
H VND F+H + VI+C D IK+WDA
Sbjct: 359 HQSFVNDCCFNHDEDR--VISCSSDGKIKIWDA 389
Score = 71 (30.1 bits), Expect = 0.00062, Sum P(3) = 0.00062
Identities = 28/98 (28%), Positives = 42/98 (42%)
Query: 555 RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSI---DADGGL---PA 608
+T + K ++F L D I+ WD ++ +L S+ D + A
Sbjct: 218 KTIKFNNKNKPETIKFSPDSKYLLTGSMDGFIEVWDYNTGKLSKSLAYQSNDDFMMHDDA 277
Query: 609 SPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFE 646
I F+KDG LA + DN IK+ G + LR FE
Sbjct: 278 ILCIAFSKDGEFLATGSLDNKIKVWQIKSG-KCLRKFE 314
Score = 68 (29.0 bits), Expect = 4.6e-09, Sum P(3) = 4.6e-09
Identities = 46/165 (27%), Positives = 73/165 (44%)
Query: 16 LEQESGFFFNMKYFEDEVHNGNWDDVEK--YLSGFTKVDDNRYSMKIFFEIRKQKYLEAL 73
L++E+G N ++ N DV+ + S T V R S + ++ +Q +E L
Sbjct: 39 LQEETGINLNAVDSKETFLN----DVKNGNWDSVLTVVSTLRLSTTLLMDLYEQ-IVELL 93
Query: 74 DKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLS-----KYGDTKSAR 128
H K E+ ++ N + + L LEN + E + KYG T R
Sbjct: 94 --H--LKEYELCKYLIRKTEPLNYMKLNQQERYLKLENHLQREYIDLGDFYKYGITTEKR 149
Query: 129 SIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQ-HQ 172
K+LIE L + + P+ SRL +L++QSL+WQ HQ
Sbjct: 150 R------KQLIEQ--LNNEIITVPS---SRLLSLLSQSLHWQKHQ 183
Score = 51 (23.0 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 25/102 (24%), Positives = 45/102 (44%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASP-RIRFNKDGCLLAVSTNDN 628
F+ ++R ++ D IK WD S L +I P S +R + + N
Sbjct: 368 FNHDEDRVISCSSDGKIKIWDAKSSDCLQTIT-----PTSVVTVRDISIRSITILLKNPE 422
Query: 629 GIKILATSDGIRLLRTFENLAYDASRTSENSKP----TISPI 666
+ ++ S I ++ + ++ + TSENSK T+SP+
Sbjct: 423 FL-LVCNSSQISIV-SMKSQTISKTFTSENSKTFLVCTLSPL 462
Score = 42 (19.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 573 TKNRFLAAGDDFSIKFWDMDS 593
TKN G D +K W +S
Sbjct: 504 TKNLLATTGSDCLLKIWKSNS 524
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 136 (52.9 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 41/140 (29%), Positives = 69/140 (49%)
Query: 387 FKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQH 446
F+++DL ++ Q ++ ++P VN V + G S+ + Q+ Y E
Sbjct: 284 FRLYDLPDFTLIQQLSMGQNP---VNTVSVNQTGEWLAFGSSK-LGQLLVYEWQSE-SYI 338
Query: 447 LEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPH 506
L+ H N +A+S + V+T +D IKVWD T+G FE H + V +V
Sbjct: 339 LKQQGHFDSTNSLAYSPDGSR--VVTASEDGKIKVWDITSGFCLATFEEHTSSVTAV--Q 394
Query: 507 HKENIQFIFSTALDGKIKAW 526
+ Q +FS++LDG ++AW
Sbjct: 395 FAKRGQVMFSSSLDGTVRAW 414
Score = 89 (36.4 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P + A +D+ I +++V+ ++ L GH ++ L+FS +VL S+ D + +
Sbjct: 440 PSGEVVCAGSLDNFDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRI 499
Query: 917 WSSDGWEKQ 925
WS G +Q
Sbjct: 500 WSIFGRSQQ 508
Score = 89 (36.4 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEI---DAHVGGVNDI-AFSHPNKQLC 469
V +SPDG LF +A R + QI+ ++ RQ H G DI + +
Sbjct: 102 VKFSPDGRLFALASGRFL-QIWKTPDVNKDRQFAPFVRHRVHAGHFQDITSLTWSQDSRF 160
Query: 470 VITCGDDKTIKVWDATNGAKQYI---FEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++T D + K+W + K F GH V H + + I++ + DG + W
Sbjct: 161 ILTTSKDLSAKIWSVDSEEKNLAATTFNGHRDYVMGAFFSHDQ--EKIYTVSKDGAVFVW 218
Score = 50 (22.7 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 575 NRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIK 631
+R + A +D IK WD+ S L + + + ++F K G ++ S+ D ++
Sbjct: 358 SRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTA--VQFAKRGQVMFSSSLDGTVR 412
Score = 46 (21.3 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 20/92 (21%), Positives = 35/92 (38%)
Query: 787 LWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXX 845
+W +G ++ D S E V C + S+ +S + SAS K I +++
Sbjct: 457 VWSVQTGQLL--DAL-SGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIE 513
Query: 846 XXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNV 877
P D +A+ I I+N+
Sbjct: 514 VYSDVLALSMRP-DGKEVAVSTLKGQISIFNI 544
Score = 45 (20.9 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 604 GGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFE 646
G ++ + ++ DG + ++ D IK+ + G L TFE
Sbjct: 343 GHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGF-CLATFE 384
Score = 42 (19.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDAD 603
VQF T N F AA + + + D++ L D D
Sbjct: 684 VQFSPTANAFAAASTEGLLIYSTNDTI-LFDPFDLD 718
Score = 39 (18.8 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 880 DEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D +K SK T + +S +V+ G ++ +C++
Sbjct: 567 DRFTAKNSERSKFFTTIHYSFDGMAIVAGGNNNSICLY 604
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 122 (48.0 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 30/117 (25%), Positives = 56/117 (47%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
S++ +SP G G + + V+I++ D + + H GVNDIA+S ++ C
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKLGVNDIAWSSDSR--C 143
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
V++ DDKT+K+++ +GH V+ C + + S + D ++ W
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVF--CCNFNPQSSLVVSGSFDESVRIW 198
Score = 92 (37.4 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 31/141 (21%), Positives = 60/141 (42%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISL--FNXXXXXXXXX 842
++W +G + V D NP A F S N Y+++++ + L F+
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKF--SPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
Query: 843 XXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
I G +D I I+N++ E+ L+GH++ + + H +
Sbjct: 296 GHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA-SDCHPV 354
Query: 903 NVLVSSGA---DSQLCVWSSD 920
+++SGA D+++ +W SD
Sbjct: 355 QNIIASGALEPDNKIHIWRSD 375
Score = 76 (31.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 36/159 (22%), Positives = 64/159 (40%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
+ K+W++ M + L + VN + WS D A ++I+ R
Sbjct: 109 KTVKIWNMD--HMICERTLTGHK-LGVNDIAWSSDSRCVVSASDDKTLKIFEIVTS---R 162
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC 504
+ H V F+ P L V++ D+++++WD G H PV +V
Sbjct: 163 MTKTLKGHNNYVFCCNFN-PQSSL-VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVS 220
Query: 505 PHHKENIQFIFSTALDGKIKAWLYDN---LGSRVDYEAP 540
+ ++ I S + DG ++ W N + + VD E P
Sbjct: 221 FNRDGSL--IASGSYDGLVRIWDTANGQCIKTLVDDENP 257
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 122 (48.0 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 30/117 (25%), Positives = 56/117 (47%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
S++ +SP G G + + V+I++ D + + H GVNDIA+S ++ C
Sbjct: 89 SISSAKFSPCGKYLGTSSADKTVKIWNM---DHMICERTLTGHKLGVNDIAWSSDSR--C 143
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
V++ DDKT+K+++ +GH V+ C + + S + D ++ W
Sbjct: 144 VVSASDDKTLKIFEIVTSRMTKTLKGHNNYVF--CCNFNPQSSLVVSGSFDESVRIW 198
Score = 92 (37.4 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 31/141 (21%), Positives = 60/141 (42%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISL--FNXXXXXXXXX 842
++W +G + V D NP A F S N Y+++++ + L F+
Sbjct: 238 RIWDTANGQCIKTLVDDENPPVAFVKF--SPNGKYILASNLDSTLKLWDFSKGKTLKQYT 295
Query: 843 XXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
I G +D I I+N++ E+ L+GH++ + + H +
Sbjct: 296 GHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLA-SDCHPV 354
Query: 903 NVLVSSGA---DSQLCVWSSD 920
+++SGA D+++ +W SD
Sbjct: 355 QNIIASGALEPDNKIHIWRSD 375
Score = 76 (31.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 36/159 (22%), Positives = 64/159 (40%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
+ K+W++ M + L + VN + WS D A ++I+ R
Sbjct: 109 KTVKIWNMD--HMICERTLTGHK-LGVNDIAWSSDSRCVVSASDDKTLKIFEIVTS---R 162
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC 504
+ H V F+ P L V++ D+++++WD G H PV +V
Sbjct: 163 MTKTLKGHNNYVFCCNFN-PQSSL-VVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVS 220
Query: 505 PHHKENIQFIFSTALDGKIKAWLYDN---LGSRVDYEAP 540
+ ++ I S + DG ++ W N + + VD E P
Sbjct: 221 FNRDGSL--IASGSYDGLVRIWDTANGQCIKTLVDDENP 257
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 133 (51.9 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 32/119 (26%), Positives = 58/119 (48%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHG-GDEVRQHL-EIDAHVGGVNDIAFSHPNKQ 467
+V+ V +S DG L A + ++ Y+ + D + + + E H G++D+AFS +
Sbjct: 26 AVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDAR- 84
Query: 468 LCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
+++ DDKT+K+WD G+ GH Y+ C + I S + D ++ W
Sbjct: 85 -FIVSASDDKTLKLWDVETGSLIKTLIGHTN--YAFCVNFNPQSNMIVSGSFDETVRIW 140
Score = 77 (32.2 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 22/136 (16%), Positives = 53/136 (38%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W +G + + D NP + F S N +++ + + L+N
Sbjct: 180 RIWDSGTGHCVKTLIDDENPPVSFVRF--SPNGKFILVGTLDNTLRLWNISSAKFLKTYT 237
Query: 845 XXXXXXX--XXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + ++ + ++ KL+GH++ + +A
Sbjct: 238 GHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTE 297
Query: 903 NVLVSSGADSQLCVWS 918
N++ S D + +W+
Sbjct: 298 NLIASGSLDKTVRIWT 313
Score = 65 (27.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ + +++ D + WD + + ++ D P S +RF+ +G + V T D
Sbjct: 161 VDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVS-FVRFSPNGKFILVGTLD 219
Query: 628 NGIKILATSDGIRLLRTF 645
N +++ S + L+T+
Sbjct: 220 NTLRLWNISSA-KFLKTY 236
Score = 61 (26.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 20/86 (23%), Positives = 37/86 (43%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGH--SKRITGLAFSHALNVLVSSGADSQLCV 916
+ I +G D++++++N+ + GH ++ AFS + SG++ CV
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDN-CV 267
Query: 917 WSSDGWEKQKNRFLQIPTGRTPTAQS 942
WE + LQ G T T +
Sbjct: 268 HM---WELNSKKLLQKLEGHTETVMN 290
Score = 51 (23.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 13/54 (24%), Positives = 26/54 (48%)
Query: 550 SADGTRTYQGFRKRSLGVVQ-FDTTKNRFLAAG-DDFSIKFWDMDSVQLLTSID 601
SA +TY G + F T + + +G +D + W+++S +LL ++
Sbjct: 229 SAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLE 282
>TAIR|locus:2172432 [details] [associations]
symbol:AT5G43920 "AT5G43920" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006703
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 EMBL:EF601122 EMBL:AK227235 IPI:IPI00548878
RefSeq:NP_199205.1 UniGene:At.26347 ProteinModelPortal:Q9FND4
SMR:Q9FND4 STRING:Q9FND4 PRIDE:Q9FND4 ProMEX:Q9FND4
EnsemblPlants:AT5G43920.1 GeneID:834414 KEGG:ath:AT5G43920
TAIR:At5g43920 InParanoid:Q9FND4 OMA:SSCAWFP PhylomeDB:Q9FND4
ProtClustDB:CLSN2686863 Genevestigator:Q9FND4 Uniprot:Q9FND4
Length = 523
Score = 102 (41.0 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 48/191 (25%), Positives = 82/191 (42%)
Query: 9 FTSKHFLLEQESGFFF---NMKYFEDEVHNGNWDDVEKYLSGF--TKVDDNRYSMKIFFE 63
F + LE ES + + ++ E +V +GNWD + L +DD R + +
Sbjct: 33 FKNSASCLEFESKILYKTADSEFLEKQVLSGNWDSCVQVLDRIFDNSMDDTRNTA--LYL 90
Query: 64 IRKQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGD 123
+ KQ LE L + D + A+ +L K + E++ + ++ + E +
Sbjct: 91 VFKQCLLEYLKRGDVSLALNVLRKQAPLLRMGKEKIHRLACDIVYSKEMESGEVDNCL-- 148
Query: 124 TKSARSIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLCKNPRPNPDI 183
R +LVEL+KLI PL + P RL L+ ++ Q C + D
Sbjct: 149 VLDLRRKLLVELEKLI---PL---PIVIPE---RRLEHLVETAVMDQIDTCMYHN-SCDA 198
Query: 184 KTLFVDHTCGQ 194
+L+ DH CG+
Sbjct: 199 VSLYKDHCCGR 209
Score = 84 (34.6 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 31/169 (18%), Positives = 72/169 (42%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITC 473
V +S G A S I+ ++V +++H V+ +++S + +L +TC
Sbjct: 230 VQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKL--LTC 287
Query: 474 GDDKTIKVWDATNGAKQYIFEGHEAP-VYSVCPHHKENIQFIFSTALDGKIKAWLYDNLG 532
G+ + +K+WD G ++ F + S C ++ + + ++ D + ++D G
Sbjct: 288 GNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSS-DPERGIVMWDTDG 346
Query: 533 SRVDYEAPGRW--CTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLA 579
+ + R +A + DG F + + ++ +T R ++
Sbjct: 347 NEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETKVERVIS 395
Score = 76 (31.8 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 16/60 (26%), Positives = 35/60 (58%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQ-LCVW 917
D++ IA G +DS + I+N++ + L GHS + ++++ +++S +D Q + +W
Sbjct: 454 DSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 66 (28.3 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 27/111 (24%), Positives = 42/111 (37%)
Query: 417 SPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG-D 475
S DG F V S + ++ G E +Q L+ H I I G +
Sbjct: 406 SGDGKFFIVNLSCQEIHLWDLAG--EWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSE 463
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D + +W+ N + GH V V + K N + + S + D I+ W
Sbjct: 464 DSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPK-NPRMLASASDDQTIRIW 513
Score = 56 (24.8 bits), Expect = 7.1e-06, Sum P(3) = 7.1e-06
Identities = 35/148 (23%), Positives = 66/148 (44%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVG-GVNDIAFSHPNKQLC 469
V+ V WSPD + + +++++ G V +H + + G V+ A+ + +L
Sbjct: 272 VSFVSWSPDDTKLLTCGNAEVLKLWDVDTG--VLRHTFGNNNTGFTVSSCAWFPDSTRLV 329
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVY---SVCPHHKENIQFIFSTALDGKIKAW 526
+ ++ I +WD T+G + + G P +V P + I +FS D +I+
Sbjct: 330 CGSSDPERGIVMWD-TDGNEIKAWRGTRIPKVVDLAVTPDGESMIT-VFS---DKEIRIL 384
Query: 527 LYDNLGSRV-DYEAPGRWCTTMAYSADG 553
+ RV E P T+++ S DG
Sbjct: 385 NLETKVERVISEEQP---ITSLSISGDG 409
Score = 52 (23.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLK--GH--SKRITGLAFSHALNVLVSSGA-DSQ 913
D + + I ++++ E K LK GH SK + F + ++SG+ DSQ
Sbjct: 408 DGKFFIVNLSCQEIHLWDL-AGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQ 466
Query: 914 LCVWS 918
+ +W+
Sbjct: 467 VYIWN 471
Score = 52 (23.4 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 25/96 (26%), Positives = 40/96 (41%)
Query: 333 EDLPKTVTRTLNQGSSPMS-MDFHPVQQTLLLVGTNVGDIGLWEV--GSRERLVLRNFKV 389
+D + TL +P+S + + P LL G N + LW+V G N
Sbjct: 255 DDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCG-NAEVLKLWDVDTGVLRHTFGNNNTG 313
Query: 390 WDLGACS-MPLQAALV---KDPGVSVNRVIWSPDGS 421
+ + +C+ P LV DP + V+W DG+
Sbjct: 314 FTVSSCAWFPDSTRLVCGSSDPERGI--VMWDTDGN 347
Score = 44 (20.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 747 FTNSGNAILALASNAIHLLWK 767
F+NSG + +S+ ++WK
Sbjct: 232 FSNSGKYLATASSDCTAIIWK 252
Score = 40 (19.1 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 571 DTTKNRFLAAGDDFSIKFWDMDS 593
D TK L G+ +K WD+D+
Sbjct: 280 DDTK--LLTCGNAEVLKLWDVDT 300
Score = 39 (18.8 bits), Expect = 5.5e-05, Sum P(3) = 5.5e-05
Identities = 12/66 (18%), Positives = 27/66 (40%)
Query: 811 CFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDD 869
CF + S++ S S ++ ++N +P++ ++A DD
Sbjct: 449 CFG-GLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDD 507
Query: 870 SSIQIY 875
+I+I+
Sbjct: 508 QTIRIW 513
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 114 (45.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 29/117 (24%), Positives = 55/117 (47%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
S++ V +SP G G + + V+I++ ++ + H GVND A+S +K
Sbjct: 81 SISAVKFSPCGKFLGTSSADKTVKIWNM---SDLSCERTLTGHKLGVNDFAWSADSKS-- 135
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++T DDKT+K+++ +GH V+ C + + S + D ++ W
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHTNYVF--CCNFNPQSSLVVSGSFDESVRIW 190
Score = 96 (38.9 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 32/141 (22%), Positives = 58/141 (41%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISL--FNXXXXXXXXX 842
++W +G + V D NP A F S N Y++S++ + L F
Sbjct: 230 RIWDTANGQCVKTLVDDENPPVAFVKF--SPNGKYILSSNLDNTLKLWDFGKGKTLKQYQ 287
Query: 843 XXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
I G +D I ++N++ EV L+GH++ + + H +
Sbjct: 288 GHENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIA-SDCHPM 346
Query: 903 NVLVSSGA---DSQLCVWSSD 920
+++SGA D+ + +W SD
Sbjct: 347 QNMIASGALEPDNTIRIWRSD 367
Score = 87 (35.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 32/142 (22%), Positives = 57/142 (40%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
+ K+W++ S + L + VN WS D A ++IY V+
Sbjct: 101 KTVKIWNMSDLSC--ERTLTGHK-LGVNDFAWSADSKSIVTASDDKTLKIYEV---PTVK 154
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC 504
+ H V F+ P L V++ D+++++WD G H PV +V
Sbjct: 155 MAKTLKGHTNYVFCCNFN-PQSSL-VVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVS 212
Query: 505 PHHKENIQFIFSTALDGKIKAW 526
+ ++ I S + DG ++ W
Sbjct: 213 FNRDGSL--ITSGSYDGLVRIW 232
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 133 (51.9 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 37/103 (35%), Positives = 58/103 (56%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAK-Q 490
+++Y+Y+ G++V Q +AH + IA HP+K ++T DD TIK+W+ + K +
Sbjct: 79 IRVYNYNTGEKVTQ---FEAHPDYIRSIAV-HPSKPY-ILTSSDDLTIKLWNWDHNWKLE 133
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGS 533
FEGH+ V SV + K+ F S LD +K W +LGS
Sbjct: 134 QTFEGHQHYVMSVNFNPKDPNTFA-SACLDRTVKIW---SLGS 172
Score = 85 (35.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 17/73 (23%), Positives = 38/73 (52%)
Query: 856 HPQ-DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
+PQ D + DD +I++++ + + L+GH ++ F L ++VS D +
Sbjct: 193 YPQADKPYLITSSDDKTIKVWDYQTKSCVATLEGHLSNVSFAIFHPELPIIVSGSEDGTI 252
Query: 915 CVWSSDGWEKQKN 927
W+S+ ++ +K+
Sbjct: 253 RFWNSNTFKLEKS 265
Score = 45 (20.9 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADS 912
HP+ II G +D +I+ +N +++ + +R + NV +++G DS
Sbjct: 237 HPE-LPIIVSGSEDGTIRFWNSNTFKLEKSINYSLERAWCIGILPKSNV-IAAGFDS 291
Score = 42 (19.8 bits), Expect = 0.00095, Sum P(2) = 0.00095
Identities = 7/24 (29%), Positives = 17/24 (70%)
Query: 578 LAAGDDFSIKFWDMDSVQLLTSID 601
++ +D +I+FW+ ++ +L SI+
Sbjct: 244 VSGSEDGTIRFWNSNTFKLEKSIN 267
Score = 42 (19.8 bits), Expect = 0.00099, Sum P(3) = 0.00099
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 574 KNRFLAAGDDFSIKFWDMDSVQLLTSID 601
K + + DD +IK WD + + +++
Sbjct: 198 KPYLITSSDDKTIKVWDYQTKSCVATLE 225
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 154 (59.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 56/192 (29%), Positives = 83/192 (43%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
R K+WD S LQ L + V VI+S D L A S V+I+ G
Sbjct: 318 RTVKIWDTETGS--LQHTLEGHSDL-VRSVIFSHDSRLLASA-SDSTVKIWDTGTGS--L 371
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC 504
QH ++ H V + FSH ++ L + DD T+K+WD G+ Q+ EGH V SV
Sbjct: 372 QHT-LEGHRDWVRSVIFSHDSQLLA--SASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVI 428
Query: 505 PHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGR--WCTTMAYSADGTRTYQGFRK 562
H Q + S + D +K W D + + G W ++ +S D
Sbjct: 429 FSHDS--QLLASASDDSTVKIW--DTGTGSLQHTLEGHRDWVRSVIFSHDSRLLASASDD 484
Query: 563 RSLGVVQFDTTK 574
R++ + +DT K
Sbjct: 485 RTVRI--WDTEK 494
Score = 147 (56.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 42/139 (30%), Positives = 66/139 (47%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
K+WD G S LQ L + V VI+S D L A V+I+ G QH
Sbjct: 404 KIWDTGTGS--LQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGS--LQHT 458
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHH 507
++ H V + FSH ++ L + DD+T+++WD G+ ++ EGH + V SV H
Sbjct: 459 -LEGHRDWVRSVIFSHDSRLLA--SASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSH 515
Query: 508 KENIQFIFSTALDGKIKAW 526
+ + S + D ++ W
Sbjct: 516 DSRL--LASASNDQTVRIW 532
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 53/211 (25%), Positives = 91/211 (43%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
++ H V +++SH ++ L + DD+T+K+WD G+ Q+ EGH V SV H
Sbjct: 292 LEGHEAAVLSVSYSHDSRLLA--SASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHD 349
Query: 509 ENIQF--------IFSTA-------LDGKIKAWLYDNLGSRVDYE--APGRWCTTMAYSA 551
+ I+ T L+G + W+ + S D + A +T+
Sbjct: 350 SRLLASASDSTVKIWDTGTGSLQHTLEGH-RDWVRSVIFSH-DSQLLASASDDSTVKIWD 407
Query: 552 DGT----RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
GT T +G R V+ F +A DD ++K WD + L +++
Sbjct: 408 TGTGSLQHTLEGHRDWVRSVI-FSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWV 466
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDG 638
S + F+ D LLA +++D ++I T G
Sbjct: 467 RS--VIFSHDSRLLASASDDRTVRIWDTEKG 495
Score = 109 (43.4 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 39/153 (25%), Positives = 73/153 (47%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D+ ++A DDS+++I++ ++ L+GH + + FSH +L S+ DS + +W
Sbjct: 390 DSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWD 449
Query: 919 SDGWEKQKNRFLQIPTGRTPTAQSDTRVQF-HQDQIHFLVVHETQLAIFETTKLECVKQW 977
+ Q L+ G +S V F H ++ + + I++T K K
Sbjct: 450 TGTGSLQHT--LE---GHRDWVRS---VIFSHDSRLLASASDDRTVRIWDTEK-GSHKHT 500
Query: 978 VPRESSAPITHATFSCDSQLVYACFLDATVCVF 1010
+ SS +T +FS DS+L+ + D TV ++
Sbjct: 501 LEGHSSL-VTSVSFSHDSRLLASASNDQTVRIW 532
Score = 82 (33.9 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 575 NRFLA-AGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKIL 633
+R LA A DD ++K WD ++ L +++ L S + F+ D LLA S +D+ +KI
Sbjct: 308 SRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRS--VIFSHDSRLLA-SASDSTVKIW 364
Query: 634 ATSDGIRLLRTFE 646
T G L T E
Sbjct: 365 DTGTG-SLQHTLE 376
Score = 57 (25.1 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 575 NRFLA-AGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNK 616
+R LA A +D +++ WD+++ L + D D + A +RF+K
Sbjct: 517 SRLLASASNDQTVRIWDIEARSLQHTFDLDATIEA---MRFDK 556
>GENEDB_PFALCIPARUM|MAL8P1.43 [details] [associations]
symbol:MAL8P1.43 "u5 snrnp-specific protein,
putative" species:5833 "Plasmodium falciparum" [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000091644 KO:K12857 EMBL:AL844507 RefSeq:XP_002808871.1
ProteinModelPortal:C0H4X1 EnsemblProtists:MAL8P1.43:mRNA
GeneID:2655384 KEGG:pfa:MAL8P1.43 EuPathDB:PlasmoDB:PF3D7_0822800
ProtClustDB:CLSZ2514512 Uniprot:C0H4X1
Length = 324
Score = 103 (41.3 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 31/139 (22%), Positives = 62/139 (44%)
Query: 869 DSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNR 928
D++I+ Y+ + ++K GH ITGL + +L S AD +C W + ++
Sbjct: 183 DNTIKKYDCKNYKLKDTFIGHKDYITGLDINKDETMLASISADESICFWDIQPFSCEEKL 242
Query: 929 FLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWVPRESSAPITH 988
Q+ + + + ++ F+ D + + L I++ K + +K +P +S I
Sbjct: 243 LFQLNSPKYNIDYNLIKLSFNNDNLLACGSGDNYLYIYDY-KQKILKYSLPGHTST-IND 300
Query: 989 ATFSCDSQLVYACFLDATV 1007
F +V +C D T+
Sbjct: 301 VAFHPVEDIVASCSSDHTI 319
Score = 102 (41.0 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 31/111 (27%), Positives = 53/111 (47%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
W D + A + H + ++ ++R D V G++ I N L V +C D
Sbjct: 88 WLQDDNYICSASADHKLFLWDVECESKLRSFKGHDNIVNGLDII-----NHNLFV-SCSD 141
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D T+K WD + +I + H+ P+ SVC K +F+F++ +D IK +
Sbjct: 142 DNTLKFWDIRSKWAVHIIK-HDFPLLSVCSDKKG--EFLFTSCVDNTIKKY 189
Score = 76 (31.8 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGAD 911
++N++A G D+ + IY+ + +K L GH+ I +AF +++ S +D
Sbjct: 264 NDNLLACGSGDNYLYIYDYKQKILKYSLPGHTSTINDVAFHPVEDIVASCSSD 316
Score = 64 (27.6 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 20/57 (35%), Positives = 29/57 (50%)
Query: 575 NRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIK 631
N F++ DD ++KFWD+ S + I D L + + +K G L S DN IK
Sbjct: 134 NLFVSCSDDNTLKFWDIRSKWAVHIIKHDFPLLS---VCSDKKGEFLFTSCVDNTIK 187
Score = 59 (25.8 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
Identities = 22/79 (27%), Positives = 34/79 (43%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY-IFEGHEAPVYSVCPHH 507
I++H G V I FS K + + D TI V + N + + GH+ V
Sbjct: 33 INSHKGEVYSINFSSDGKYIA--SSSFDMTIMVHNVYNECETIGVLRGHKNAVLQAKWLQ 90
Query: 508 KENIQFIFSTALDGKIKAW 526
+N +I S + D K+ W
Sbjct: 91 DDN--YICSASADHKLFLW 107
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 116 (45.9 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 38/144 (26%), Positives = 61/144 (42%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFS--HPNKQLC-- 469
+ WSPDG + ++ G +V + L H + +++ H N + C
Sbjct: 162 ISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALA--GHSKWITALSWEPLHANPE-CRY 218
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LY 528
V + D +++VWD T G + I GH V C + ++S + D IK W +
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAH 275
Query: 529 DNLGSRVDYEAPGRWCTTMAYSAD 552
D + R + G W TMA S D
Sbjct: 276 DGVLCRT-LQGHGHWVNTMALSTD 298
Score = 92 (37.4 bits), Expect = 8.4e-08, Sum P(2) = 8.4e-08
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ IIA D SI++++ R + + L+GH + +A+S +LVS +DS L VW
Sbjct: 383 DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Score = 80 (33.2 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 14/59 (23%), Positives = 33/59 (55%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ G DS++++++V+ ++ + L GH+ + + +S + S G D L +W
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 61 (26.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 575 NRFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+R +A+ D SIK WD + + L S+ G + A +I ++ D LL ++D+ +K+
Sbjct: 384 SRIIASASFDKSIKLWDGRTGKYLASLR--GHVAAVYQIAWSADSRLLVSGSSDSTLKV 440
Score = 57 (25.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 866 GMDDSSIQIYNVRVDEVK-SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
G DD ++ +++ D+ +++ GH I + FS ++ S+ D + +W DG
Sbjct: 347 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW--DG 401
Score = 46 (21.3 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 576 RFLAAGDDFSIKFWD-MDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R ++ DDF++ W + + L + L ++ F+ D ++A ++ D IK+
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQAL--INQVLFSPDSRIIASASFDKSIKL 398
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 114 (45.2 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 37/144 (25%), Positives = 61/144 (42%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFS--HPNKQLC-- 469
+ WSPDG + ++ G +V + L H + +++ H N + C
Sbjct: 113 ISWSPDGKTLASGCKNGQILLWDPSTGKQVGRVLA--GHSKWITGLSWEPLHANPE-CRY 169
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LY 528
+ + D +++VWD T G + I GH V C + ++S + D IK W +
Sbjct: 170 MASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAH 226
Query: 529 DNLGSRVDYEAPGRWCTTMAYSAD 552
D + R + G W TMA S D
Sbjct: 227 DGVLCRT-LQGHGHWVNTMALSTD 249
Score = 92 (37.4 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ IIA D SI++++ R + + L+GH + +A+S +LVS +DS L VW
Sbjct: 334 DSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 392
Score = 80 (33.2 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 14/59 (23%), Positives = 33/59 (55%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ G DS++++++V+ ++ + L GH+ + + +S + S G D L +W
Sbjct: 376 DSRLLVSGSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 434
Score = 61 (26.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 575 NRFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+R +A+ D SIK WD + + L S+ G + A +I ++ D LL ++D+ +K+
Sbjct: 335 SRIIASASFDKSIKLWDGRTGKYLASLR--GHVAAVYQIAWSADSRLLVSGSSDSTLKV 391
Score = 56 (24.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 866 GMDDSSIQIYNVRVDEVK-SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
G DD ++ +++ D+ +++ GH I + FS ++ S+ D + +W DG
Sbjct: 298 GSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW--DG 352
Score = 46 (21.3 bits), Expect = 7.1e-07, Sum P(3) = 7.1e-07
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 576 RFLAAGDDFSIKFWD-MDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R ++ DDF++ W + + L + L ++ F+ D ++A ++ D IK+
Sbjct: 294 RLVSGSDDFTLFMWSPAEDKKPLARMTGHQAL--INQVLFSPDSRIIASASFDKSIKL 349
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 116 (45.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 38/144 (26%), Positives = 61/144 (42%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFS--HPNKQLC-- 469
+ WSPDG + ++ G +V + L H + +++ H N + C
Sbjct: 164 ISWSPDGKKLASGCKNGQILLWDPSTGTQVGRTLT--GHSKWITGLSWEPLHMNPE-CRY 220
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LY 528
V + D +++VWD T G + I GH V C + ++S + D IK W +
Sbjct: 221 VASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAH 277
Query: 529 DNLGSRVDYEAPGRWCTTMAYSAD 552
D + R + G W TMA S D
Sbjct: 278 DGVLCRT-LQGHGHWVNTMALSTD 300
Score = 91 (37.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ I+A D SI++++ R + + L+GH + +A+S +LVS +DS L VW
Sbjct: 385 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 443
Score = 80 (33.2 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 14/59 (23%), Positives = 33/59 (55%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ G DS++++++V+ ++ + L GH+ + + +S + S G D L +W
Sbjct: 427 DSRLLVSGSSDSTLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 485
Score = 60 (26.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 575 NRFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+R +A+ D SIK WD + + L S+ G + A +I ++ D LL ++D+ +K+
Sbjct: 386 SRIVASASFDKSIKLWDGRTGKYLASLR--GHVAAVYQIAWSADSRLLVSGSSDSTLKV 442
Score = 56 (24.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 866 GMDDSSIQIYNVRVDEVK-SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
G DD ++ +++ D+ +++ GH I + FS ++ S+ D + +W DG
Sbjct: 349 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW--DG 403
Score = 53 (23.7 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 16/59 (27%), Positives = 29/59 (49%)
Query: 575 NRFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+R L +G D ++K WD+ + +L T D G + ++ DG +A D ++I
Sbjct: 428 SRLLVSGSSDSTLKVWDVKAQKLTT--DLPGHADEVYAVDWSPDGQRVASGGKDKCLRI 484
Score = 45 (20.9 bits), Expect = 8.7e-07, Sum P(3) = 8.7e-07
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 576 RFLAAGDDFSIKFWD-MDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R ++ DDF++ W + + L + L ++ F+ D ++A ++ D IK+
Sbjct: 345 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQAL--INQVLFSPDSRIVASASFDKSIKL 400
>UNIPROTKB|Q9NVX2 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9606
"Homo sapiens" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602
OrthoDB:EOG4BCDMS EMBL:AK001320 EMBL:AB209111 EMBL:AC022916
EMBL:BC002884 EMBL:BC012075 EMBL:AJ005257 IPI:IPI00018196
IPI:IPI00556116 RefSeq:NP_001014445.1 RefSeq:NP_060566.2
UniGene:Hs.85570 ProteinModelPortal:Q9NVX2 SMR:Q9NVX2 IntAct:Q9NVX2
MINT:MINT-1474299 STRING:Q9NVX2 PhosphoSite:Q9NVX2 DMDM:296439488
SWISS-2DPAGE:Q9NVX2 PaxDb:Q9NVX2 PRIDE:Q9NVX2
Ensembl:ENST00000360831 Ensembl:ENST00000442241 GeneID:54475
KEGG:hsa:54475 UCSC:uc002hiy.1 UCSC:uc002hiz.1
GeneCards:GC17M033458 HGNC:HGNC:19889 HPA:HPA018807
neXtProt:NX_Q9NVX2 PharmGKB:PA142671263 GenomeRNAi:54475
NextBio:56780 ArrayExpress:Q9NVX2 Bgee:Q9NVX2 CleanEx:HS_NLE1
Genevestigator:Q9NVX2 GermOnline:ENSG00000073536 Uniprot:Q9NVX2
Length = 485
Score = 115 (45.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 37/144 (25%), Positives = 61/144 (42%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFS--HPNKQLC-- 469
+ WSPDG + ++ G +V + L H + +++ H N + C
Sbjct: 162 ISWSPDGRKLASGCKNGQILLWDPSTGKQVGRTLA--GHSKWITGLSWEPLHANPE-CRY 218
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LY 528
V + D ++++WD T G + I GH V C + ++S + D IK W +
Sbjct: 219 VASSSKDGSVRIWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAH 275
Query: 529 DNLGSRVDYEAPGRWCTTMAYSAD 552
D + R + G W TMA S D
Sbjct: 276 DGVLCRT-LQGHGHWVNTMALSTD 298
Score = 91 (37.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ I+A D SI++++ R + + L+GH + +A+S +LVS +DS L VW
Sbjct: 383 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Score = 78 (32.5 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ G DS++++++V+ ++ L GH+ + + +S + S G D L +W
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 60 (26.2 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 575 NRFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+R +A+ D SIK WD + + L S+ G + A +I ++ D LL ++D+ +K+
Sbjct: 384 SRIVASASFDKSIKLWDGRTGKYLASLR--GHVAAVYQIAWSADSRLLVSGSSDSTLKV 440
Score = 56 (24.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 866 GMDDSSIQIYNVRVDEVK-SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
G DD ++ +++ D+ +++ GH I + FS ++ S+ D + +W DG
Sbjct: 347 GSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLW--DG 401
Score = 50 (22.7 bits), Expect = 5.6e-07, Sum P(3) = 5.6e-07
Identities = 14/58 (24%), Positives = 29/58 (50%)
Query: 576 RFLAAGDDFSIKFWD-MDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R ++ DDF++ W + + LT + L ++ F+ D ++A ++ D IK+
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLTRMTGHQAL--INQVLFSPDSRIVASASFDKSIKL 398
>MGI|MGI:2429770 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007219 "Notch signaling
pathway" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:2429770 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
EMBL:AL603745 GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855
OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154 CTD:54475
HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS EMBL:BC018399 IPI:IPI00124677
RefSeq:NP_663406.2 UniGene:Mm.29176 ProteinModelPortal:Q8VEJ4
SMR:Q8VEJ4 STRING:Q8VEJ4 PhosphoSite:Q8VEJ4 PaxDb:Q8VEJ4
PRIDE:Q8VEJ4 Ensembl:ENSMUST00000103213 GeneID:217011
KEGG:mmu:217011 InParanoid:B1ARD5 NextBio:375506 Bgee:Q8VEJ4
CleanEx:MM_NLE1 Genevestigator:Q8VEJ4 GermOnline:ENSMUSG00000020692
Uniprot:Q8VEJ4
Length = 485
Score = 114 (45.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 39/144 (27%), Positives = 61/144 (42%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFS--HPNKQLC-- 469
+ WSPDG V ++ G +V + L H + +++ H N + C
Sbjct: 162 ISWSPDGKKLASGCKNGQVLLWDPSTGLQVGRTLT--GHSKWITGLSWEPLHMNPE-CRY 218
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LY 528
V + D +++VWD T G + I GH V C + ++S + D IK W +
Sbjct: 219 VASSSKDGSVRVWDTTAGRCERILTGHTQSV--TCLRWGGD-GLLYSASQDRTIKVWRAH 275
Query: 529 DNLGSRVDYEAPGRWCTTMAYSAD 552
D + R + G W TMA S D
Sbjct: 276 DGVLCRT-LQGHGHWVNTMALSTD 298
Score = 91 (37.1 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ I+A D SI++++ R + + L+GH + +A+S +LVS +DS L VW
Sbjct: 383 DSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 441
Score = 80 (33.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 14/59 (23%), Positives = 33/59 (55%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ G DS++++++V+ ++ + L GH+ + + +S + S G D L +W
Sbjct: 425 DSRLLVSGSSDSTLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 60 (26.2 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 575 NRFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+R +A+ D SIK WD + + L S+ G + A +I ++ D LL ++D+ +K+
Sbjct: 384 SRIVASASFDKSIKLWDGRTGKYLASLR--GHVAAVYQIAWSADSRLLVSGSSDSTLKV 440
Score = 56 (24.8 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 866 GMDDSSIQIYNVRVDEVK-SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
G DD ++ +++ D+ +++ GH I + FS ++ S+ D + +W DG
Sbjct: 347 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLW--DG 401
Score = 45 (20.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 576 RFLAAGDDFSIKFWD-MDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R ++ DDF++ W + + L + L ++ F+ D ++A ++ D IK+
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQAL--INQVLFSPDSRIVASASFDKSIKL 398
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 102 (41.0 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 37/150 (24%), Positives = 67/150 (44%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYS 436
GSR++ V ++W ++ ++ + + +V V + DG L A V+++S
Sbjct: 79 GSRDKTV----RIW---VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVKVWS 131
Query: 437 YHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGH 496
H R + H+ V FS P+ +L +++ DDKT+K+WD T+ + + H
Sbjct: 132 TH---RQRFLFSLTQHINWVRCAKFS-PDGRL-IVSASDDKTVKLWDKTSRECVHSYCEH 186
Query: 497 EAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
V V H I + +D +K W
Sbjct: 187 GGFVTYVDFHPSGTC--IAAAGMDNTVKVW 214
Score = 92 (37.4 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I DS+++I ++ + L GH T +AFS S G+D Q+
Sbjct: 238 HPSGNYLITAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 916 VWSSD 920
VW S+
Sbjct: 297 VWKSN 301
Score = 89 (36.4 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 25/107 (23%), Positives = 47/107 (43%)
Query: 809 VPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGM 867
V C S + ++SAS K + L++ HP I A GM
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 868 DDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D++ +++++ R + + HS + L+F + N L+++ +DS L
Sbjct: 208 DNT-VKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
Score = 77 (32.2 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 28/141 (19%), Positives = 55/141 (39%)
Query: 438 HGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHE 497
H ++ H V + FS K L + D T+ +W ++ Y F GH+
Sbjct: 4 HSQEDPSLERHFKGHRDAVTCVDFSLNTKHLA--SGSMDSTLMIWHMKPQSRAYRFTGHK 61
Query: 498 APVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTY 557
V C + + + S + D ++ W+ + G + A ++ + +DG
Sbjct: 62 DAV--TCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLV 119
Query: 558 QGFRKRSLGVVQFDTTKNRFL 578
+++ V + T + RFL
Sbjct: 120 TASDDKTVKV--WSTHRQRFL 138
Score = 73 (30.8 bits), Expect = 1.9e-07, Sum P(3) = 1.9e-07
Identities = 20/78 (25%), Positives = 37/78 (47%)
Query: 569 QFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDN 628
+F ++A DD ++K WD S + + S GG + F+ G +A + DN
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY--VDFHPSGTCIAAAGMDN 209
Query: 629 GIKILATSDGIRLLRTFE 646
+K+ T RL++ ++
Sbjct: 210 TVKVWDTRTH-RLVQHYQ 226
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 109 (43.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 50/198 (25%), Positives = 82/198 (41%)
Query: 411 VNRVIWSPDGSLFGV-AYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+ V + GS F +Y R +++ G+E+ ++ H V IAF++P
Sbjct: 95 LTNVALNKSGSCFITGSYDR-TCKLWDTASGEELNT---LEGHRNVVYAIAFNNPYGDK- 149
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYD 529
+ T DKT K+W G + F GH A + VC + + ++D K W
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEI--VCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 530 NLGSRVDYEAPGRWCT--TMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAG---DDF 584
N G V Y G +++++ G R G ++ V DT + + G +
Sbjct: 208 N-GEEV-YTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEIS 265
Query: 585 SIKF-WDMDSVQLLTSID 601
S F WD S+ L S+D
Sbjct: 266 SASFNWDC-SLILTGSMD 282
Score = 102 (41.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 37/162 (22%), Positives = 71/162 (43%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
+PQ + ++A G D++ ++++++ E L+GHS I L+F+ + + +++ D +
Sbjct: 186 NPQ-STLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVV 244
Query: 916 VWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVH-ETQLAIFETTKLECV 974
VW +D K + I G S F+ D L + +++ T +CV
Sbjct: 245 VWDADTGRK-----VNILIGHCAEISS---ASFNWDCSLILTGSMDKTCKLWDATNGKCV 296
Query: 975 KQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLK 1016
+ I + F +L+ D T +FSAA K
Sbjct: 297 ATLTGHDDE--ILDSCFDYTGKLIATASADGTARIFSAATRK 336
Score = 94 (38.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 26/133 (19%), Positives = 56/133 (42%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG-GKISLFNXXXXXXXXXXX 844
+LW +G + +T + E CF + + +AS G +F+
Sbjct: 286 KLWDATNGKCVAT-LTGHDDEILDSCFDYT--GKLIATASADGTARIFSAATRKCIAKLE 342
Query: 845 XXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNV 904
+PQ N+++ G D + +I++ + + L+GH+ I AF++ N+
Sbjct: 343 GHEGEISKISFNPQGNHLLT-GSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNI 401
Query: 905 LVSSGADSQLCVW 917
+++ D+ +W
Sbjct: 402 VITGSKDNTCRIW 414
Score = 88 (36.0 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 21/78 (26%), Positives = 38/78 (48%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
+ AH+ + ++A + C IT D+T K+WD +G + EGH VY++ ++
Sbjct: 88 LKAHILPLTNVALNKSGS--CFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNP 145
Query: 509 ENIQFIFSTALDGKIKAW 526
+ I + + D K W
Sbjct: 146 YGDK-IATGSFDKTCKLW 162
Score = 84 (34.6 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 26/111 (23%), Positives = 46/111 (41%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
++P +L +++ G+EV + H + ++F+ + +IT
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQNGEEV---YTLRGHSAEIISLSFNTSGDR--IITGSF 239
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D T+ VWDA G K I GH A + S + I + ++D K W
Sbjct: 240 DHTVVVWDADTGRKVNILIGHCAEISSAS--FNWDCSLILTGSMDKTCKLW 288
Score = 75 (31.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
+IA D + +I++ + +KL+GH I+ ++F+ N L++ +D +W +
Sbjct: 317 LIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDA-- 374
Query: 922 WEKQKNRFLQIPTGRT 937
Q + LQ+ G T
Sbjct: 375 ---QTGQCLQVLEGHT 387
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 112 (44.5 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 37/143 (25%), Positives = 59/143 (41%)
Query: 418 PDGSLF-GVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDD 476
P+G L + R QIY + ++ + + H G V + F+ + TC D
Sbjct: 65 PEGELLLSSGFDR---QIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSH--IFTCSTD 119
Query: 477 KTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVD 536
KT+ WD G +Q F+GH V SV + Q + S + D IK W +
Sbjct: 120 KTLAFWDIATGQRQRRFKGHGNFVNSV-QGSRRGQQLLCSGSDDRTIKIWDARKKHAAHT 178
Query: 537 YEAPGRWCTTMAYSADGTRTYQG 559
E+P + T + + G + G
Sbjct: 179 LESPFQ-VTAVCFGDTGEQVISG 200
Score = 88 (36.0 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+I+ G+D+ ++I+++R V L+GHS ITG++ S + ++++ D+ L VW
Sbjct: 197 VISGGIDNE-VKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVW 251
Score = 62 (26.9 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSD 920
I G D + I++V + KL GH+ + + FS +++S +D L + D
Sbjct: 289 ITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEID 346
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 109 (43.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 30/117 (25%), Positives = 60/117 (51%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+++ V +SP+G + + ++ I+ + G+ ++ L H ++D+A+S + +L
Sbjct: 41 AISSVKFSPNGEWLASSAADALIIIWGAYDGN-CKKTLY--GHSLEISDVAWSSDSSRL- 96
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ DDKT+KVWD +G +GH V+ C + + I S + D +K W
Sbjct: 97 -VSASDDKTLKVWDMRSGKCLKTLKGHSDFVFC-CDFNPPS-NLIVSGSFDESVKIW 150
Score = 90 (36.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 28/140 (20%), Positives = 56/140 (40%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSAS-GGKISLFNXXXXXXXXXXX 844
++W SG + + NP + F S N Y+++A+ + L++
Sbjct: 190 RIWDAASGQCLRTLADEGNPPVSFVKF--SPNGKYILTATLDNTLKLWDYSRGRCLKTYT 247
Query: 845 XXXXXXX--XXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ G +D+ + I+N++ E+ +L+GH+ + A
Sbjct: 248 GHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTK 307
Query: 903 NVLVSSGA--DSQLCVWSSD 920
N++ S+ D + VWSSD
Sbjct: 308 NIIASAALENDKTIKVWSSD 327
Score = 85 (35.0 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 23/81 (28%), Positives = 41/81 (50%)
Query: 565 LGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVS 624
+ V F+ + ++ D + WD S Q L ++ AD G P ++F+ +G + +
Sbjct: 168 ISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTL-ADEGNPPVSFVKFSPNGKYILTA 226
Query: 625 TNDNGIKILATSDGIRLLRTF 645
T DN +K+ S G R L+T+
Sbjct: 227 TLDNTLKLWDYSRG-RCLKTY 246
Score = 77 (32.2 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 24/118 (20%), Positives = 49/118 (41%)
Query: 409 VSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQL 468
+ ++ V WS D S A ++++ G ++ + H V F+ P+
Sbjct: 82 LEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKT---LKGHSDFVFCCDFNPPSN-- 136
Query: 469 CVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
+++ D+++K+W+ G H P+ +V + N I S + DG + W
Sbjct: 137 LIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAV--NFNCNGSLIVSGSYDGLCRIW 192
Score = 76 (31.8 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 24/97 (24%), Positives = 42/97 (43%)
Query: 548 AYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
AY + +T G + V + + +R ++A DD ++K WDM S + L ++
Sbjct: 68 AYDGNCKKTLYG-HSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFV 126
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
FN L+ + D +KI G + L+T
Sbjct: 127 FC--CDFNPPSNLIVSGSFDESVKIWEVKTG-KCLKT 160
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 102 (41.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 27/111 (24%), Positives = 52/111 (46%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
+SPD S V++++ G +R+ E++ H +N F++ +++ + TC +
Sbjct: 668 FSPDDRHIATCASDKKVKLWNVERGVLIRE-FEVE-HEEQINHCQFTNTGRRVLLATCSN 725
Query: 476 DK--TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIK 524
DK K+W+ Q GH PV C N ++ +++ DG +K
Sbjct: 726 DKFTNTKLWNPNKKTSQNTMFGHMEPVNHCC--FSPNDLYLATSSSDGSLK 774
Score = 90 (36.7 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL-CVW 917
+A+G +D ++Q+ V + KL GH+K + F+ +L++S DS + VW
Sbjct: 982 VALGSEDGTVQVIEVPSSKASVKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVVW 1037
Score = 89 (36.4 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 441 DEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPV 500
+E L + H G V FS ++ +CG K ++V+ +T+G K + HE V
Sbjct: 606 EEGLSRLVMHPHQGAVYYACFSKDGSKIA--SCGASKALRVFKSTSGEKLLELQAHEEDV 663
Query: 501 YSVCPHHKENIQFIFSTALDGKIKAW 526
+C + + I + A D K+K W
Sbjct: 664 --LCCAFSPDDRHIATCASDKKVKLW 687
Score = 89 (36.4 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
Identities = 29/115 (25%), Positives = 51/115 (44%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
+S DGS + ++++ G+++ LE+ AH V AFS ++ + TC
Sbjct: 626 FSKDGSKIASCGASKALRVFKSTSGEKL---LELQAHEEDVLCCAFSPDDRHIA--TCAS 680
Query: 476 DKTIKVWDATNGAKQYIFE-GHEAPVYSVCPHHKENIQFIFSTALDGKI---KAW 526
DK +K+W+ G FE HE + + C + + +T + K K W
Sbjct: 681 DKKVKLWNVERGVLIREFEVEHEEQI-NHCQFTNTGRRVLLATCSNDKFTNTKLW 734
Score = 84 (34.6 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 20/120 (16%), Positives = 52/120 (43%)
Query: 801 TDSNPEEAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
+D + V C S + S ++ A+ + +F+ ++
Sbjct: 796 SDEEIKAMVKCSTWSADGSQIICAARNTVFVFDVETSDLLLELKTSRLSTIQFCHACPNS 855
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSD 920
+++A+ + +++++N + K++ GH + + FS ++L+SS D + +W +D
Sbjct: 856 SLLAVALSHYTVELWNFESSKKKAECSGHLSWVHCVQFSPDGSLLLSSSDDQTIRLWETD 915
Score = 70 (29.7 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 18/79 (22%), Positives = 37/79 (46%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
VQF + L++ DD +I+ W+ D V +++ L + F+ + +
Sbjct: 891 VQFSPDGSLLLSSSDDQTIRLWETDRVHTSSAV----ALKRDTDVLFSHSDATIIAPDSS 946
Query: 628 NGIKILATSDGIRLLRTFE 646
N +++L+ S G +L + E
Sbjct: 947 NRLQVLSGSTGAVVLESEE 965
Score = 46 (21.3 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 577 FLA-AGDDFSIKFWDMDSVQLLTSIDADGGLPAS 609
+LA + D S+K +++ S SID D P S
Sbjct: 763 YLATSSSDGSLKLFEVSSANEWKSIDVDSFFPES 796
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 132 (51.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 57/239 (23%), Positives = 97/239 (40%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
+ RVI+ P ++ ++++ Y G R + H VNDIA KQL
Sbjct: 109 ITRVIFHPLWTIMASCSEDATIKVWDYETGQLERT---LKGHTDAVNDIAIDAAGKQL-- 163
Query: 471 ITCGDDKTIKVWD--ATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLY 528
++C D +IK+WD T + + +GHE V SV F+ S + D IK W
Sbjct: 164 VSCSSDLSIKLWDFGQTYDCLKSL-KGHEHTVSSVT--FLPTGDFVLSASRDHTIKQWDI 220
Query: 529 DNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKF 588
+ W + S DGT +++ V F T + + + +++
Sbjct: 221 STGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVEC 280
Query: 589 --WDMDSVQL-LTSIDADGGLPASPRIRFN--KDGCLLA--VSTNDNGIKILATSDGIR 640
W D+ +T +G S I F+ +D + A ++T D +LA + +R
Sbjct: 281 VEWAPDTAYTNVTGQQPEGN---STHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVR 336
Score = 68 (29.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 14/63 (22%), Positives = 32/63 (50%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP+ +I++ DD +++++ + ++ H ++ +AF H + V +G+ C
Sbjct: 341 HPKGKYLISVA-DDKTLRVWELSAQRCMKAIEAHEHFVSTVAF-HQTSPFVITGSVDMSC 398
Query: 916 -VW 917
VW
Sbjct: 399 KVW 401
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 125 (49.1 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 42/141 (29%), Positives = 65/141 (46%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
+SPDG L A V+++ + + E H G N + F HP+ C+ G
Sbjct: 154 FSPDGRLIASASDDKTVKLWDKTSRECIHSFCE---HGGFANHVEF-HPSGT-CIAAAGT 208
Query: 476 DKTIKVWDAT-NGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSR 534
DKT+KVWD N Q+ ++ H A V S+ H N ++ + + D +K + D L R
Sbjct: 209 DKTVKVWDVRMNRLLQH-YQVHTAAVNSLSFHPSGN--YLITASNDSTLK--ILDLLEGR 263
Query: 535 VDYEAPGRW--CTTMAYSADG 553
+ Y G T +A+S G
Sbjct: 264 LLYTLHGHQGPATCVAFSRTG 284
Score = 89 (36.4 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I +DS+++I ++ + L GH T +AFS + S G+D Q+
Sbjct: 239 HPSGNYLITAS-NDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVM 297
Query: 916 VWSSD 920
VW ++
Sbjct: 298 VWKTN 302
Score = 86 (35.3 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 451 AHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN 510
AH V + FS + L +T DDKTIKVW T ++++F + + C +
Sbjct: 102 AHTATVRSVHFSSDGQSL--VTASDDKTIKVW--TVHRQKFLFSLSQHINWVRCARFSPD 157
Query: 511 IQFIFSTALDGKIKAW 526
+ I S + D +K W
Sbjct: 158 GRLIASASDDKTVKLW 173
Score = 82 (33.9 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V+F + AAG D ++K WD+ +LL S + F+ G L ++ND
Sbjct: 194 VEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNS--LSFHPSGNYLITASND 251
Query: 628 NGIKILATSDGIRLLRT 644
+ +KIL +G RLL T
Sbjct: 252 STLKILDLLEG-RLLYT 267
Score = 78 (32.5 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 27/102 (26%), Positives = 41/102 (40%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H V + FS P+ L V + DKT+ +W + + +F+ H A V SV H +
Sbjct: 61 HKDAVMCVQFS-PSGHL-VASGSRDKTVCLWVPSVKGESTVFKAHTATVRSV--HFSSDG 116
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADG 553
Q + + + D IK W W +S DG
Sbjct: 117 QSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCARFSPDG 158
Score = 73 (30.8 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 576 RFLA-AGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R +A A DD ++K WD S + + S GG + + F+ G +A + D +K+
Sbjct: 159 RLIASASDDKTVKLWDKTSRECIHSFCEHGGF--ANHVEFHPSGTCIAAAGTDKTVKV 214
Score = 72 (30.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 22/102 (21%), Positives = 41/102 (40%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H + + FS KQL + D +K+W + Y GH+ V +C +
Sbjct: 19 HRDAITSVDFSLNKKQLA--SGSMDSCLKIWSMKPQMRAYCLVGHKDAV--MCVQFSPSG 74
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADG 553
+ S + D + W+ G ++A ++ +S+DG
Sbjct: 75 HLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDG 116
Score = 67 (28.6 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F + + A DD +IK W + + L S+ R F+ DG L+A +++D
Sbjct: 110 VHFSSDGQSLVTASDDKTIKVWTVHRQKFLFSLSQHINWVRCAR--FSPDGRLIASASDD 167
Query: 628 NGIKI 632
+K+
Sbjct: 168 KTVKL 172
Score = 38 (18.4 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 11/39 (28%), Positives = 17/39 (43%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGL 606
V F T + F + G D + W + ++ D DG L
Sbjct: 278 VAFSRTGDFFASGGSDEQVMVWKTN----FSAADYDGVL 312
>UNIPROTKB|E1BR73 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00597741
ProteinModelPortal:E1BR73 Ensembl:ENSGALT00000018802
ArrayExpress:E1BR73 Uniprot:E1BR73
Length = 1251
Score = 118 (46.6 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY 491
+Q++ G+ + LEI AH + FS +K V TC DK +K+W++ G Y
Sbjct: 638 LQVFKAESGERL---LEISAHDDEILCCTFSADDKY--VATCSADKKVKIWNSRTGKCLY 692
Query: 492 IFEGHEAPVYSVCPHHKENIQFIFSTALDGK-IKAW 526
++E H V + C + Q++ +T D IK W
Sbjct: 693 VYEEHTEQV-NCCQFNNRRGQYLLATCSDDTYIKLW 727
Score = 94 (38.1 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 30/185 (16%), Positives = 74/185 (40%)
Query: 799 DVTDSNPEEAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQ 858
D + E V C + S++ ++ + K+ LF+
Sbjct: 790 DEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCA 849
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
+ ++A+ + SI+++N++ + +GH+ + + FS ++ ++S D + +W
Sbjct: 850 GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 909
Query: 919 SDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVH-ETQLAIFETTKLECVKQW 977
++ K + L+ S+ V FH ++ L ++ + + + + Q
Sbjct: 910 TNKVCKSSDAVLK----------SELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQT 959
Query: 978 VPRES 982
P+ES
Sbjct: 960 EPQES 964
Score = 70 (29.7 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 23/113 (20%), Positives = 46/113 (40%)
Query: 806 EEAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 865
+EA+ FA +N + + G + ++N P + +
Sbjct: 1046 KEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSST 1105
Query: 866 GMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADS-QLCVW 917
D ++ +I++ V +LKGH + AFS + N L+++G D + +W
Sbjct: 1106 SADKTA-KIWSFESSSVLHELKGHEACVRCSAFSPS-NKLLATGDDKGDIRIW 1156
Score = 62 (26.9 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 869 DSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNR 928
D+ IQ++N +++E LKGH + I AF +S+L WS DG K N
Sbjct: 1026 DAVIQVWNWQLNECVF-LKGHKEAIKDFAFLE----------NSKLLSWSFDGTVKVWN- 1073
Query: 929 FLQIPTGRT 937
I TG+T
Sbjct: 1074 ---ITTGKT 1079
Score = 53 (23.7 bits), Expect = 0.00051, Sum P(4) = 0.00051
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDE---------VKSKLKGHSKRITGLAFSHALNVLVSSG 909
N ++A G D I+I+++ E V + H +T L+FS +LVSSG
Sbjct: 1141 NKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG 1199
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 740 TKISRLIFTNSGNAILALASNAIHLLWKWQRTE 772
T + FT +++ A +A+ +W WQ E
Sbjct: 1006 TSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNE 1038
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F + + FL + +D +I+ W+ + V S DA L + + F+ ++ N
Sbjct: 887 VTFSSDGSLFLTSSEDQTIRIWETNKV--CKSSDAV--LKSELDVVFHNGEVMILAIYNQ 942
Query: 628 NGIKIL-ATSDGIRLLRT 644
I+++ +D I +++T
Sbjct: 943 KHIQLINGNTDSI-IMQT 959
>UNIPROTKB|F1P1P3 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0006952
"defense response" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AADN02005970 IPI:IPI00822807
Ensembl:ENSGALT00000038231 ArrayExpress:F1P1P3 Uniprot:F1P1P3
Length = 1252
Score = 118 (46.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 29/96 (30%), Positives = 47/96 (48%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY 491
+Q++ G+ + LEI AH + FS +K V TC DK +K+W++ G Y
Sbjct: 639 LQVFKAESGERL---LEISAHDDEILCCTFSADDKY--VATCSADKKVKIWNSRTGKCLY 693
Query: 492 IFEGHEAPVYSVCPHHKENIQFIFSTALDGK-IKAW 526
++E H V + C + Q++ +T D IK W
Sbjct: 694 VYEEHTEQV-NCCQFNNRRGQYLLATCSDDTYIKLW 728
Score = 94 (38.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 30/185 (16%), Positives = 74/185 (40%)
Query: 799 DVTDSNPEEAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQ 858
D + E V C + S++ ++ + K+ LF+
Sbjct: 791 DEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCA 850
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
+ ++A+ + SI+++N++ + +GH+ + + FS ++ ++S D + +W
Sbjct: 851 GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 910
Query: 919 SDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVH-ETQLAIFETTKLECVKQW 977
++ K + L+ S+ V FH ++ L ++ + + + + Q
Sbjct: 911 TNKVCKSSDAVLK----------SELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQT 960
Query: 978 VPRES 982
P+ES
Sbjct: 961 EPQES 965
Score = 70 (29.7 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 23/113 (20%), Positives = 46/113 (40%)
Query: 806 EEAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 865
+EA+ FA +N + + G + ++N P + +
Sbjct: 1047 KEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSST 1106
Query: 866 GMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADS-QLCVW 917
D ++ +I++ V +LKGH + AFS + N L+++G D + +W
Sbjct: 1107 SADKTA-KIWSFESSSVLHELKGHEACVRCSAFSPS-NKLLATGDDKGDIRIW 1157
Score = 62 (26.9 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 24/69 (34%), Positives = 34/69 (49%)
Query: 869 DSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNR 928
D+ IQ++N +++E LKGH + I AF +S+L WS DG K N
Sbjct: 1027 DAVIQVWNWQLNECVF-LKGHKEAIKDFAFLE----------NSKLLSWSFDGTVKVWN- 1074
Query: 929 FLQIPTGRT 937
I TG+T
Sbjct: 1075 ---ITTGKT 1080
Score = 53 (23.7 bits), Expect = 0.00051, Sum P(4) = 0.00051
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDE---------VKSKLKGHSKRITGLAFSHALNVLVSSG 909
N ++A G D I+I+++ E V + H +T L+FS +LVSSG
Sbjct: 1142 NKLLATGDDKGDIRIWDILTGELLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLVSSG 1200
Score = 52 (23.4 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 740 TKISRLIFTNSGNAILALASNAIHLLWKWQRTE 772
T + FT +++ A +A+ +W WQ E
Sbjct: 1007 TSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNE 1039
Score = 48 (22.0 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F + + FL + +D +I+ W+ + V S DA L + + F+ ++ N
Sbjct: 888 VTFSSDGSLFLTSSEDQTIRIWETNKV--CKSSDAV--LKSELDVVFHNGEVMILAIYNQ 943
Query: 628 NGIKIL-ATSDGIRLLRT 644
I+++ +D I +++T
Sbjct: 944 KHIQLINGNTDSI-IMQT 960
>UNIPROTKB|Q58D20 [details] [associations]
symbol:NLE1 "Notchless protein homolog 1" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=IEA] [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:BT021777 IPI:IPI00688704
RefSeq:NP_001014887.1 UniGene:Bt.22388 ProteinModelPortal:Q58D20
STRING:Q58D20 PRIDE:Q58D20 Ensembl:ENSBTAT00000025423 GeneID:509793
KEGG:bta:509793 CTD:54475 HOVERGEN:HBG007602 InParanoid:Q58D20
OrthoDB:EOG4BCDMS NextBio:20869131 Uniprot:Q58D20
Length = 486
Score = 111 (44.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 37/144 (25%), Positives = 60/144 (41%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFS--HPNKQLC-- 469
+ WSPDG + ++ G +V + L H + +++ H N + C
Sbjct: 163 ISWSPDGKKLASGCKNGQILLWDPSTGKQVGRALT--GHSKWITALSWEPLHANPE-CRY 219
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LY 528
V + D +++VWD T G + GH V C + ++S + D IK W +
Sbjct: 220 VASSSKDGSVRVWDTTAGRCERTLTGHAQSV--TCLRWGGD-GLLYSASQDRTIKVWRAH 276
Query: 529 DNLGSRVDYEAPGRWCTTMAYSAD 552
D + R + G W TMA S D
Sbjct: 277 DGVLCRT-LQGHGHWVNTMALSTD 299
Score = 91 (37.1 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ +IA D SI++++ R + + L+GH + +A+S +LVS +DS L VW
Sbjct: 384 DSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVW 442
Score = 81 (33.6 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 14/59 (23%), Positives = 33/59 (55%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ G DS++++++V+ ++ + L GH+ + + +S + S G D L +W
Sbjct: 426 DSRLLVSGSSDSTLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 484
Score = 61 (26.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F +A D SIK WD + + L S+ G + A +I ++ D LL ++D
Sbjct: 379 VVFSPDSRVIASASFDKSIKLWDGRTGKYLASLR--GHVAAVYQIAWSADSRLLVSGSSD 436
Query: 628 NGIKI 632
+ +K+
Sbjct: 437 STLKV 441
Score = 59 (25.8 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 866 GMDDSSIQIYNVRVDEVK-SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
G DD ++ +++ D+ +++ GH I + FS V+ S+ D + +W DG
Sbjct: 348 GSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLW--DG 402
Score = 44 (20.5 bits), Expect = 3.0e-06, Sum P(3) = 3.0e-06
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 576 RFLAAGDDFSIKFWD-MDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R ++ DDF++ W + + L + L ++ F+ D ++A ++ D IK+
Sbjct: 344 RLVSGSDDFTLFLWSPAEDKKPLARMTGHQAL--INQVVFSPDSRVIASASFDKSIKL 399
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 114 (45.2 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 48/178 (26%), Positives = 79/178 (44%)
Query: 380 ERLVLRNFKVWDL-GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYH 438
+RL+L +W++ G C A +K +V + ++ DGSL A + V ++
Sbjct: 77 DRLIL----MWNVYGDCE---NYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSE 129
Query: 439 GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
G+ V++ + H VN + QL T DD T+K+WD A + F+ +
Sbjct: 130 TGERVKR---LKGHTSFVNSCFPARRGPQLAC-TGSDDGTVKLWDIRKKASVHTFQ-NTY 184
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRW--CTTMAYSADGT 554
V SV + I S +D IK W D +++ Y G T ++ SADG+
Sbjct: 185 QVLSVT--FNDTSDQIISGGIDNDIKVW--DLRQNKLIYSMQGHGDSVTGLSLSADGS 238
Score = 95 (38.5 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 28/110 (25%), Positives = 52/110 (47%)
Query: 418 PDGS-LFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDD 476
P+G+ L Y R ++ +++ +G E + + H G V ++ ++ L + D
Sbjct: 66 PNGATLASSGYDR-LILMWNVYGDCE--NYATLKGHSGAVMELHYNTDGSLL--FSASTD 120
Query: 477 KTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
KT+ VWD+ G + +GH + V S P + Q + + DG +K W
Sbjct: 121 KTVCVWDSETGERVKRLKGHTSFVNSCFPARR-GPQLACTGSDDGTVKLW 169
Score = 83 (34.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 17/58 (29%), Positives = 38/58 (65%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH +TGL+ S + L+S+ D+ + VW
Sbjct: 196 DQIISGGIDND-IKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVW 252
Score = 78 (32.5 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L+ S+ G + + DG L ++ D
Sbjct: 189 VTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG--LSLSADGSYLLSNSMD 246
Query: 628 NGIKI 632
N +++
Sbjct: 247 NSVRV 251
Score = 67 (28.6 bits), Expect = 3.8e-07, Sum P(3) = 3.8e-07
Identities = 15/58 (25%), Positives = 29/58 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
D + IA G D + I++ + KL GH+ + +AF +++S +D +L +
Sbjct: 286 DGSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYI 343
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 107 (42.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 47/181 (25%), Positives = 80/181 (44%)
Query: 348 SPMSMDFHPVQQTLLLVGTNVGDIG-LWEVGSRERLVLRNFKVWDLGACSMPLQAALVKD 406
+P + F V T ++ G N G L SR++ V ++W S+ ++ + K
Sbjct: 48 APKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQTV----RLW---TPSIKGESTVFKA 100
Query: 407 PGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL-EIDAHVGGVNDIAFSHPN 465
SV V +S DG A V+++ G E ++ L ++ H V FS P+
Sbjct: 101 HTASVRSVHFSRDGQRLVTASDDKSVKVW----GVERKKFLYSLNRHTNWVRCARFS-PD 155
Query: 466 KQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKA 525
+L + +CGDD+T+++WD ++ IF + V + I S+ D IK
Sbjct: 156 GRL-IASCGDDRTVRLWDTSSHQCINIFTDYGGSATFV--DFNSSGTCIASSGADNTIKI 212
Query: 526 W 526
W
Sbjct: 213 W 213
Score = 95 (38.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 21/65 (32%), Positives = 36/65 (55%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I+ G DS+I+I ++ + L GH + + FS ++ S GADSQ+
Sbjct: 237 HPSGNYLIS-GSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVL 295
Query: 916 VWSSD 920
+W ++
Sbjct: 296 MWKTN 300
Score = 91 (37.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/134 (22%), Positives = 59/134 (44%)
Query: 449 IDAHVGGVNDIA----FSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC 504
++ H G D+ F+ NKQL +C DK++ +W+ A+ + F GH + V
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQLATGSC--DKSLMIWNLAPKARAFRFVGHTDVITGV- 66
Query: 505 PHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRS 564
+ + + S++ D ++ W G ++A ++ +S DG R +S
Sbjct: 67 -NFAPSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKS 125
Query: 565 LGVVQFDTTKNRFL 578
+ V + + +FL
Sbjct: 126 VKV--WGVERKKFL 137
Score = 87 (35.7 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 38/168 (22%), Positives = 70/168 (41%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H + + F+ P+ L V + D+T+++W + + +F+ H A V SV H +
Sbjct: 59 HTDVITGVNFA-PSGSL-VASSSRDQTVRLWTPSIKGESTVFKAHTASVRSV--HFSRDG 114
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFD 571
Q + + + D +K W + W +S DG R++ + +D
Sbjct: 115 QRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRL--WD 172
Query: 572 TTKNRFLAAGDDF--SIKFWDMDSV-QLLTSIDADGGLPASPRIRFNK 616
T+ ++ + D+ S F D +S + S AD + IR NK
Sbjct: 173 TSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWD-IRTNK 219
Score = 82 (33.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/113 (25%), Positives = 47/113 (41%)
Query: 550 SADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPAS 609
S G T S+ V F R + A DD S+K W ++ + L S++
Sbjct: 90 SIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRC 149
Query: 610 PRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFENLAYDASRTSENSKPT 662
R F+ DG L+A +D +++ TS + + F + A+ NS T
Sbjct: 150 AR--FSPDGRLIASCGDDRTVRLWDTSSH-QCINIFTDYGGSATFVDFNSSGT 199
Score = 67 (28.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 22/78 (28%), Positives = 40/78 (51%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDA-DGGLPASPRIRFNKDGCLLAVSTN 626
V F+++ ++G D +IK WD+ + +L+ + G+ F+ G L ++
Sbjct: 192 VDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNC---FSFHPSGNYLISGSS 248
Query: 627 DNGIKILATSDGIRLLRT 644
D+ IKIL +G RL+ T
Sbjct: 249 DSTIKILDLLEG-RLIYT 265
Score = 64 (27.6 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
IA D++I+I+++R +++ K H+ + +F + N L+S +DS +
Sbjct: 201 IASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTI 252
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 103 (41.3 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 31/109 (28%), Positives = 52/109 (47%)
Query: 416 WSPDGSLFGVA-YSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
+S DGS A Y + QI+ ++ E + H G + ++ F+ + L ++ G
Sbjct: 44 FSSDGSFLASAGYDQ---QIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHL--VSAG 98
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKI 523
DKT++VWD G+ F+ H V SV ++ Q I S + DG +
Sbjct: 99 TDKTVRVWDMETGSCIRNFKSHTDIVNSV-DVNRRGPQMICSASDDGTV 146
Score = 92 (37.4 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+N+I G+D+ I+++++ ++V+ L GH IT L+ SH N L+S+ D L W
Sbjct: 176 DNVICGGIDNQ-IKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMDCSLMSW 232
Score = 70 (29.7 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P+DN I A G D + ++N + KL GH + A +L+S+G+D + +
Sbjct: 265 PRDNYITA-GSADRFVYVWNAKSRACVYKLPGHLGSVNCTALHPTQQILLSAGSDKTIFL 323
Query: 917 WSSD 920
D
Sbjct: 324 GELD 327
Score = 67 (28.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/56 (25%), Positives = 30/56 (53%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+I DD ++ ++++R E K ++ T + F+ A + ++ G D+Q+ VW
Sbjct: 136 MICSASDDGTVMVHDMRSKEAAKKFICKYQQ-TAVTFNDAADNVICGGIDNQIKVW 190
Score = 46 (21.3 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDM 591
V F+ + + G D IK WDM
Sbjct: 169 VTFNDAADNVICGGIDNQIKVWDM 192
>UNIPROTKB|F1NUL8 [details] [associations]
symbol:WDR77 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008284
"positive regulation of cell proliferation" evidence=IEA]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060770 "negative
regulation of epithelial cell proliferation involved in prostate
gland development" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006357 GO:GO:0060770
GO:GO:0030374 GeneTree:ENSGT00390000010711 EMBL:AADN02044988
IPI:IPI00923799 Ensembl:ENSGALT00000002188 ArrayExpress:F1NUL8
Uniprot:F1NUL8
Length = 346
Score = 109 (43.4 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 32/123 (26%), Positives = 61/123 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVR-VDEVKSKLKGHSKRITGLAFS-HALNVLVSSGADSQ 913
HPQ+++I A+G + ++ + + + D S + H++R+TG AFS H+ +L S D
Sbjct: 225 HPQESDIFALGDESGTVALVDTKNPDSALSSIV-HARRVTGFAFSAHSSPLLASISEDCT 283
Query: 914 LCVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLEC 973
+ V +SD E ++R + + SD + H ++ H + E + + C
Sbjct: 284 VAVLNSDLSEVFRSRSHRDFVKGLSWSPSDNALLTTVGWDHQVLHHTVPIPTGEASGINC 343
Query: 974 VKQ 976
VK+
Sbjct: 344 VKE 346
Score = 64 (27.6 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV--CPHHKENIQFIFSTALDGKIKAW 526
++ G D ++KVWD A + + H V V CP K+ I F+ S A D +I W
Sbjct: 139 VSGGRDFSVKVWDLPQQAVLHSYRAHSDAVTCVAACPG-KDTI-FL-SCAEDERILLW 193
Score = 63 (27.2 bits), Expect = 6.8e-07, Sum P(3) = 6.8e-07
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 329 FSTPEDLPKTVTRTLNQGSSPMSMDFHPVQQTLLLVGTNVGDIGLWEVGSRERLVLRNF 387
F+ P P T + D V +LVG++ G + LWE+ +E L++ F
Sbjct: 59 FADPRRAPSEGFCTAGVQTEAGVADLRWVADRGILVGSDSGAVELWELDEKETLIVNKF 117
Score = 55 (24.4 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 576 RFLAAGDDFSIKFWDMDSVQLLTSIDA 602
R ++ G DFS+K WD+ +L S A
Sbjct: 137 RAVSGGRDFSVKVWDLPQQAVLHSYRA 163
Score = 55 (24.4 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 451 AHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD 483
AH V +A + P K ++C +D+ I +WD
Sbjct: 163 AHSDAVTCVA-ACPGKDTIFLSCAEDERILLWD 194
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 101 (40.6 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 28/132 (21%), Positives = 55/132 (41%)
Query: 787 LWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG-GKISLFNXXXXXXXXXXXX 845
LW SG + +T + E CF + + +AS G ++N
Sbjct: 287 LWDATSGKCVAT-LTGHDDEILDSCFDYT--GKLIATASADGTARVYNATTRKCITKLEG 343
Query: 846 XXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVL 905
+PQ N ++ G D + +I++V+ + L+GH+ I AF++ N++
Sbjct: 344 HEGEISKISFNPQGNRLLT-GSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIV 402
Query: 906 VSSGADSQLCVW 917
++ D+ +W
Sbjct: 403 ITGSKDNSCRIW 414
Score = 97 (39.2 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 399 LQAALVKDPGVSVNRVIWSPDGSLFGV-AYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVN 457
L+A ++ V++N+ GS F +Y R +++ G+E+ H ++ H V
Sbjct: 88 LRAHILPLTNVALNKA-----GSCFITGSYDR-TCKVWDTASGEEL--HT-LEGHRNVVY 138
Query: 458 DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFST 517
IAF++P + T DKT K+W A G + F GH A + VC + +
Sbjct: 139 AIAFNNPYGDK-IATGSFDKTCKLWSAETGKCYHTFRGHTAEI--VCLSFNPQSTVVATG 195
Query: 518 ALDGKIKAW 526
++D K W
Sbjct: 196 SMDTTAKLW 204
Score = 72 (30.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 35/130 (26%), Positives = 53/130 (40%)
Query: 518 ALDGKIKAWL--YDN--LGSRVDYEAPGRWCTTMAYSADGT-RTYQGFRKR--------- 563
A GK A L +D+ L S DY G+ T SADGT R Y ++
Sbjct: 290 ATSGKCVATLTGHDDEILDSCFDYT--GKLIATA--SADGTARVYNATTRKCITKLEGHE 345
Query: 564 -SLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
+ + F+ NR L D + + WD+ + Q L ++ G FN G ++
Sbjct: 346 GEISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLE--GHTDEIFSCAFNYKGNIVI 403
Query: 623 VSTNDNGIKI 632
+ DN +I
Sbjct: 404 TGSKDNSCRI 413
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 127 (49.8 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 44/148 (29%), Positives = 65/148 (43%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGG--VNDIAFSHPNKQLCVI 471
V +S DG +R QIY G +V ++ G + + FS L
Sbjct: 287 VNFSNDGKYLATGCNRS-AQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLA-- 343
Query: 472 TCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN- 530
T +DKT+KVWD Q+ F GHE +YS+ + + +FI S + D K K W +
Sbjct: 344 TGAEDKTVKVWDIHTKKIQHTFYGHELDIYSL--DYSSDGRFIVSGSGDKKAKIWDIEKG 401
Query: 531 -----LGSRVDYEAPGRWCTTMAYSADG 553
LG+ + P T++A S DG
Sbjct: 402 KCAFTLGN--EEVGPKNGVTSVAMSPDG 427
Score = 122 (48.0 bits), Expect = 0.00094, P = 0.00094
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGG-DEVRQHLEIDAHVGGVNDIAFSHPNKQL 468
SV V +SPDG ++++ G R + H V +AFS L
Sbjct: 459 SVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWL 518
Query: 469 CVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTAL-DGKIKAWL 527
I+ D++++ WD NG + +GH+ V SV K N +F+T D + + W
Sbjct: 519 --ISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLWK 576
Query: 528 YDN 530
YD+
Sbjct: 577 YDS 579
Score = 73 (30.8 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 16/70 (22%), Positives = 33/70 (47%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D ++A G D+ +++++ + + +GH + +AFS L S D L +W
Sbjct: 426 DGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWD 485
Query: 919 SDGWEKQKNR 928
G + ++R
Sbjct: 486 LSG-SRSRSR 494
Score = 59 (25.8 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 16/65 (24%), Positives = 27/65 (41%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALN---VLVSSGADSQLC 915
D + + G D S+Q ++ R L+GH + +A S N V + D +
Sbjct: 514 DGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSR 573
Query: 916 VWSSD 920
+W D
Sbjct: 574 LWKYD 578
Score = 58 (25.5 bits), Expect = 7.6e-07, Sum P(3) = 7.6e-07
Identities = 17/58 (29%), Positives = 28/58 (48%)
Query: 576 RFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R +AAG D ++ WD + L + G L + + F+ DG LA + D +K+
Sbjct: 428 RLVAAGSLDNIVRLWDAQTGYFLERYE--GHLDSVYSVAFSPDGKSLASGSLDKSLKL 483
Score = 44 (20.5 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 556 TYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWD 590
T+ G + L V F + ++ D S++FWD
Sbjct: 498 TFNGHKDFVLSVA-FSPDGSWLISGSKDRSVQFWD 531
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 106 (42.4 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 39/150 (26%), Positives = 67/150 (44%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVK-SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D IA G DD +I+++NV + + GH + +AFS N+LVS D + +W
Sbjct: 229 DGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLW 288
Query: 918 SSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQW 977
K+ +P P + D V + I + + I++T+ +C++
Sbjct: 289 DVRSARVMKS----LPAHSDPVSGID--VVWDGTLIASCAT-DGLVRIWDTSTGQCLRTL 341
Query: 978 VPRESSAPITHATFSCDSQLVYACFLDATV 1007
V E + P++ FS + + V A LD V
Sbjct: 342 V-HEDNPPVSSVKFSPNGKYVLAWTLDDCV 370
Score = 94 (38.1 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 444 RQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV 503
RQ + H+ GV+ + FS P+ + + + G D +KVW A+ G Y FEGH A + ++
Sbjct: 167 RQKFLLRGHLRGVSAVRFS-PDASM-IASGGADGAVKVWAASTGKLIYTFEGHLAGISTI 224
Score = 75 (31.5 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
+ F N ++ D ++ WD+ S +++ S+ A P S I DG L+A D
Sbjct: 267 IAFSPKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSD-PVSG-IDVVWDGTLIASCATD 324
Query: 628 NGIKILATSDGIRLLRTF---ENLAYDASRTSENSK 660
++I TS G + LRT +N + + S N K
Sbjct: 325 GLVRIWDTSTG-QCLRTLVHEDNPPVSSVKFSPNGK 359
Score = 68 (29.0 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 16/70 (22%), Positives = 34/70 (48%)
Query: 563 RSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
R + V+F + + G D ++K W + +L+ + + G L I ++ DG +A
Sbjct: 177 RGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFE--GHLAGISTISWSPDGATIA 234
Query: 623 VSTNDNGIKI 632
++D I++
Sbjct: 235 SGSDDKTIRL 244
Score = 64 (27.6 bits), Expect = 0.00088, Sum P(2) = 0.00087
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 604 GGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTFE 646
G L +RF+ D ++A D +K+ A S G +L+ TFE
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTG-KLIYTFE 215
Score = 63 (27.2 bits), Expect = 1.3e-05, Sum P(3) = 1.3e-05
Identities = 18/80 (22%), Positives = 35/80 (43%)
Query: 866 GMDDSSIQIYNVRVDEVKSKLKGHSKRITGL--AFSHALNVLVSSGADSQLCVWSSDGWE 923
G +D +I ++V +V +++ H + G+ + +VS G D + VW G E
Sbjct: 418 GSEDGAILCWDVVTKKVLQRIEAHDGVVLGVDTCSTGEGRFMVSCGLDGTVRVWEEVGPE 477
Query: 924 KQKNRFLQIPTGRTPTAQSD 943
++ + G+ P D
Sbjct: 478 REPEPEPEPEPGQCPDQDQD 497
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 120 (47.3 bits), Expect = 0.00090, P = 0.00090
Identities = 41/141 (29%), Positives = 68/141 (48%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
+SPDG L A V+++ + + + E H G V + F HP+ C+ G
Sbjct: 153 FSPDGRLIVSASDDKTVKLWDKTSRECIHSYCE---HGGFVTYVDF-HPSGT-CIAAAGM 207
Query: 476 DKTIKVWDA-TNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSR 534
D T+KVWDA T+ Q+ ++ H A V ++ H N ++ + + D +K + D + R
Sbjct: 208 DNTVKVWDARTHRLLQH-YQLHSAAVNALSFHPSGN--YLITASSDSTLK--ILDLMEGR 262
Query: 535 VDYEAPGRW--CTTMAYSADG 553
+ Y G TT+A+S G
Sbjct: 263 LLYTLHGHQGPATTVAFSRTG 283
Score = 92 (37.4 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I DS+++I ++ + L GH T +AFS S G+D Q+
Sbjct: 238 HPSGNYLITAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 916 VWSSD 920
VW S+
Sbjct: 297 VWKSN 301
Score = 76 (31.8 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 27/127 (21%), Positives = 52/127 (40%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H V + FS K L + D T+ +W ++ Y F GH+ V C + +
Sbjct: 18 HRDAVTCVDFSLNTKHLA--SGSMDSTLMIWHMKPQSRAYRFTGHKDAV--TCVNFSPSG 73
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFD 571
+ S + D ++ W+ + G + A ++ + +DG +++ V +
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV--WS 131
Query: 572 TTKNRFL 578
T + RFL
Sbjct: 132 THRQRFL 138
Score = 74 (31.1 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 26/103 (25%), Positives = 40/103 (38%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGD-DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN 510
H V + FS P+ L + G DKT+++W + +F H A V SV H +
Sbjct: 60 HKDAVTCVNFS-PSGHL--LASGSRDKTVRIWVPNVKGESTVFRAHTATVRSV--HFCSD 114
Query: 511 IQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADG 553
Q + + + D +K W W +S DG
Sbjct: 115 GQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDG 157
Score = 72 (30.4 bits), Expect = 7.7e-07, Sum P(3) = 7.7e-07
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 569 QFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDN 628
+F ++A DD ++K WD S + + S GG + F+ G +A + DN
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTY--VDFHPSGTCIAAAGMDN 209
Query: 629 GIKI 632
+K+
Sbjct: 210 TVKV 213
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 109 (43.4 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 47/197 (23%), Positives = 84/197 (42%)
Query: 411 VNRVIWSPDGSLFGV-AYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+ V + GS F +Y R +++ G+E+ H ++ H V IAF++P
Sbjct: 95 LTNVALNKSGSCFITGSYDR-TCKLWDTASGEEL--HT-LEGHRNVVYAIAFNNPYGDK- 149
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYD 529
+ T DKT K+W G + F GH A + VC + + ++D K W
Sbjct: 150 IATGSFDKTCKLWSVETGKCYHTFRGHTAEI--VCLSFNPQSTLVATGSMDTTAKLWDIQ 207
Query: 530 NLGSRVDYEAPGRWCT--TMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGD--DFS 585
+ G V + G +++++ G R G ++ V + DT + + G + S
Sbjct: 208 S-GEEV-FTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEIS 265
Query: 586 IKFWDMDSVQLLT-SID 601
++ D +LT S+D
Sbjct: 266 SAVFNWDCSLILTGSMD 282
Score = 91 (37.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 19/69 (27%), Positives = 39/69 (56%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
+PQ + ++A G D++ ++++++ E L GHS I L+F+ + N +++ D +
Sbjct: 186 NPQ-STLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVT 244
Query: 916 VWSSDGWEK 924
VW +D K
Sbjct: 245 VWEADTGRK 253
Score = 91 (37.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 451 AHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN 510
AH+ + ++A + C IT D+T K+WD +G + + EGH VY++ ++
Sbjct: 90 AHILPLTNVALNKSGS--CFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFNNPYG 147
Query: 511 IQFIFSTALDGKIKAW 526
+ I + + D K W
Sbjct: 148 DK-IATGSFDKTCKLW 162
Score = 88 (36.0 bits), Expect = 7.8e-07, Sum P(2) = 7.8e-07
Identities = 25/133 (18%), Positives = 55/133 (41%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG-GKISLFNXXXXXXXXXXX 844
+LW +G + +T + E CF + + +AS G +F+
Sbjct: 286 KLWDAVNGKCVAT-LTGHDDEILDSCFDYT--GKLIATASADGTARIFSAATRECVTKLE 342
Query: 845 XXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNV 904
+PQ N ++ G D + +I++ + + L+GH+ I AF++ ++
Sbjct: 343 GHEGEISKISFNPQGNRLLT-GSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDI 401
Query: 905 LVSSGADSQLCVW 917
+++ D+ +W
Sbjct: 402 IITGSKDNTCRIW 414
Score = 88 (36.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/111 (22%), Positives = 46/111 (41%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
++P +L +++ G+EV + H + ++F+ + +IT
Sbjct: 185 FNPQSTLVATGSMDTTAKLWDIQSGEEV---FTLTGHSAEIISLSFNTSGNR--IITGSF 239
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D T+ VW+A G K Y GH A + S + I + ++D K W
Sbjct: 240 DHTVTVWEADTGRKVYTLIGHCAEISSAV--FNWDCSLILTGSMDKTCKLW 288
Score = 80 (33.2 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 20/76 (26%), Positives = 38/76 (50%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
+IA D + +I++ E +KL+GH I+ ++F+ N L++ +D +W +
Sbjct: 317 LIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTGSSDKTARIWDA-- 374
Query: 922 WEKQKNRFLQIPTGRT 937
Q + LQ+ G T
Sbjct: 375 ---QTGQCLQVLEGHT 387
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 108 (43.1 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 27/109 (24%), Positives = 51/109 (46%)
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
P+GS A ++ ++S +G + + + H G V ++ ++ L + DK
Sbjct: 77 PNGSTLASAGFDRLILLWSVYG--DCDNYATLKGHSGAVMELHYNTDGSML--FSASTDK 132
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T+ VWD+ G + +GH + V S P + Q + + + DG +K W
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQLVCTGSDDGTVKLW 180
Score = 87 (35.7 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH+ +TGL+ S + L+S+ D+ + VW
Sbjct: 207 DQIISGGIDND-IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 65 (27.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/56 (17%), Positives = 31/56 (55%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
++ G DD +++++++R + ++ ++ + F+ + ++S G D+ + VW
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Score = 62 (26.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L ++ G + + + +G L + D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR--GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 628 NGIKI 632
N +++
Sbjct: 258 NTVRV 262
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 94 (38.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 37/152 (24%), Positives = 68/152 (44%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYS 436
GSR++ V ++W ++ ++ + + +V V + DG A V+++S
Sbjct: 79 GSRDKTV----RIW---IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKVWS 131
Query: 437 YHGGDEVRQHL--EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFE 494
H RQ + H+ V FS P+ +L +++ DDKT+K+WD T+ + +
Sbjct: 132 TH-----RQKFLFSLSQHINWVRCARFS-PDGRL-IVSASDDKTVKLWDKTSRECVHSYC 184
Query: 495 GHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H V V H I + ++D +K W
Sbjct: 185 EHGGFVTYVDFHPSGTC--IAAASMDNTVKVW 214
Score = 90 (36.7 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N ++ DS+++I ++ + L GH T +AFS S G+D Q+
Sbjct: 238 HPSGNYLLTAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 916 VWSSD 920
VW S+
Sbjct: 297 VWKSN 301
Score = 76 (31.8 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 26/127 (20%), Positives = 52/127 (40%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H + + FS KQL + D + VW ++ Y F GH+ V C + +
Sbjct: 18 HRDAITSVDFSLNTKQLA--SGSMDSCLMVWHMKPQSRAYRFAGHKDAV--TCVNFSPSG 73
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFD 571
+ S + D ++ W+ + G + A ++ + +DG +++ V +
Sbjct: 74 HLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVKV--WS 131
Query: 572 TTKNRFL 578
T + +FL
Sbjct: 132 THRQKFL 138
Score = 74 (31.1 bits), Expect = 8.1e-07, Sum P(3) = 8.1e-07
Identities = 17/64 (26%), Positives = 31/64 (48%)
Query: 569 QFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDN 628
+F ++A DD ++K WD S + + S GG + F+ G +A ++ DN
Sbjct: 152 RFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY--VDFHPSGTCIAAASMDN 209
Query: 629 GIKI 632
+K+
Sbjct: 210 TVKV 213
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 121 (47.7 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 44/203 (21%), Positives = 81/203 (39%)
Query: 806 EEAVPCFALSKNDSYVMSASGGKI-SLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIA 864
++ V AL ++Y +S+S + L + HP D +
Sbjct: 335 KDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSSFKHLAIHP-DGMMFG 393
Query: 865 IGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEK 924
I DS+I IY+++ E K+ L GH+K + L+FS L SS D+ + +W +
Sbjct: 394 IAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTVKLWDL----R 449
Query: 925 QKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWVPRESSA 984
+ F I TP S + + V ++ Q+ FET + + + +
Sbjct: 450 KAQSFQTITLNETPNFIS---FDYSGKYLSIAVENDIQIYNFETKNQANLIKTLSSHTDI 506
Query: 985 PITHATFSCDSQLVYACFLDATV 1007
+T F + + + +D T+
Sbjct: 507 -VTQTCFGSTTSYILSSSMDKTI 528
Score = 78 (32.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVW 482
++ H+ VN I SHP+ +C IT +DKTI++W
Sbjct: 250 KLQGHLKKVNSI-ISHPSNFIC-ITASNDKTIRIW 282
Score = 48 (22.0 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 14/67 (20%), Positives = 31/67 (46%)
Query: 571 DTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGI 630
D K+ F + G+D ++ + ++ ++L+ + G L I + + ++ND I
Sbjct: 222 DHMKHNFFSGGNDGNVYYVSLNDNKILSKLQ--GHLKKVNSIISHPSNFICITASNDKTI 279
Query: 631 KILATSD 637
+I D
Sbjct: 280 RIWKGDD 286
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 121 (47.7 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 44/203 (21%), Positives = 81/203 (39%)
Query: 806 EEAVPCFALSKNDSYVMSASGGKI-SLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIA 864
++ V AL ++Y +S+S + L + HP D +
Sbjct: 335 KDHVTSLALHPLENYFISSSKDSMWILHDLETAKTIKTSKDNPSSFKHLAIHP-DGMMFG 393
Query: 865 IGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEK 924
I DS+I IY+++ E K+ L GH+K + L+FS L SS D+ + +W +
Sbjct: 394 IAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSENGYYLASSSKDNTVKLWDL----R 449
Query: 925 QKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWVPRESSA 984
+ F I TP S + + V ++ Q+ FET + + + +
Sbjct: 450 KAQSFQTITLNETPNFIS---FDYSGKYLSIAVENDIQIYNFETKNQANLIKTLSSHTDI 506
Query: 985 PITHATFSCDSQLVYACFLDATV 1007
+T F + + + +D T+
Sbjct: 507 -VTQTCFGSTTSYILSSSMDKTI 528
Score = 78 (32.5 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVW 482
++ H+ VN I SHP+ +C IT +DKTI++W
Sbjct: 250 KLQGHLKKVNSI-ISHPSNFIC-ITASNDKTIRIW 282
Score = 48 (22.0 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 14/67 (20%), Positives = 31/67 (46%)
Query: 571 DTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGI 630
D K+ F + G+D ++ + ++ ++L+ + G L I + + ++ND I
Sbjct: 222 DHMKHNFFSGGNDGNVYYVSLNDNKILSKLQ--GHLKKVNSIISHPSNFICITASNDKTI 279
Query: 631 KILATSD 637
+I D
Sbjct: 280 RIWKGDD 286
>UNIPROTKB|G4NFU5 [details] [associations]
symbol:MGG_08708 "WD repeat-containing protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001236 PRINTS:PR00319
KO:K14855 RefSeq:XP_003719269.1 ProteinModelPortal:G4NFU5
EnsemblFungi:MGG_08708T0 GeneID:2678953 KEGG:mgr:MGG_08708
Uniprot:G4NFU5
Length = 526
Score = 106 (42.4 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 34/145 (23%), Positives = 61/145 (42%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFS--HPNKQLC-- 469
V WSPDG+ V+I+ G +V E+ H V IA+ H +
Sbjct: 201 VSWSPDGTRLATCSMDKTVRIWDPETGKQVGS--ELKGHAKWVQGIAWEPLHLWRDGTPR 258
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYD 529
+++ D T ++W G +++ GH+ V V +++ + D +K W D
Sbjct: 259 LVSASKDFTARIWTVNTGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHDKTVKVW--D 316
Query: 530 NL-GSRV-DYEAPGRWCTTMAYSAD 552
+ G+ + D ++ W +A S D
Sbjct: 317 AVKGTLLHDLKSHAHWVNHLALSTD 341
Score = 86 (35.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 411 VNRVIWSP-----DGSLFGVAYSRHIV-QIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHP 464
V + W P DG+ V+ S+ +I++ + G +H+ + H G V+ + +
Sbjct: 241 VQGIAWEPLHLWRDGTPRLVSASKDFTARIWTVNTGRT--EHV-LSGHKGSVSCVRWGAG 297
Query: 465 NKQLCVITCGDDKTIKVWDATNGAKQYIFEGH 496
N V T DKT+KVWDA G + + H
Sbjct: 298 NGTGVVYTASHDKTVKVWDAVKGTLLHDLKSH 329
Score = 77 (32.2 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 14/59 (23%), Positives = 32/59 (54%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ D++++++NVR ++ + L GH + G+ +S + S G D + +W
Sbjct: 466 DSRLLVTASKDTTLKVWNVRTGKLATDLPGHEDEVYGVDWSPDGQRVGSGGRDKAVRLW 524
Score = 74 (31.1 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 17/60 (28%), Positives = 34/60 (56%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D ++IA D++ +++N R + + L+GH + +FS +LV++ D+ L VW+
Sbjct: 424 DGSMIASAGWDNATKLWNARDGKFINTLRGHVAPVYQCSFSADSRLLVTASKDTTLKVWN 483
Score = 65 (27.9 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 15/57 (26%), Positives = 34/57 (59%)
Query: 868 DDSSIQIYNVRVDEVK--SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSS-DG 921
DD ++ +++ D K +++ GH K++ + FS +++ S+G D+ +W++ DG
Sbjct: 389 DDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDNATKLWNARDG 445
Score = 60 (26.2 bits), Expect = 8.8e-07, Sum P(3) = 8.8e-07
Identities = 22/87 (25%), Positives = 40/87 (45%)
Query: 576 RFLAAGDDFSIKFWDM--DSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKIL 633
R ++A DDF++ +D D + + + G + F+ DG ++A + DN K+
Sbjct: 383 RLVSASDDFTMYLFDPLNDGTKPIARMI--GHQKQVNHVTFSPDGSMIASAGWDNATKLW 440
Query: 634 ATSDG--IRLLRTFENLAYDASRTSEN 658
DG I LR Y S ++++
Sbjct: 441 NARDGKFINTLRGHVAPVYQCSFSADS 467
Score = 53 (23.7 bits), Expect = 6.7e-05, Sum P(3) = 6.7e-05
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 984 APITHATFSCDSQLVYACFLDATVCVFSAANLKL 1017
AP+ +FS DS+L+ D T+ V++ KL
Sbjct: 456 APVYQCSFSADSRLLVTASKDTTLKVWNVRTGKL 489
>WB|WBGene00020423 [details] [associations]
symbol:prp-19 species:6239 "Caenorhabditis elegans"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0005654
GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0040011 GO:GO:0005681 GO:GO:0040035 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0040002 GO:GO:0000151
GeneTree:ENSGT00700000104487 InterPro:IPR013915 Pfam:PF08606
HOGENOM:HOG000177308 OMA:QWQELKV EMBL:FO081619 PIR:T16846
ProteinModelPortal:Q10051 SMR:Q10051 DIP:DIP-26296N IntAct:Q10051
MINT:MINT-214042 STRING:Q10051 PaxDb:Q10051
EnsemblMetazoa:T10F2.4.1 EnsemblMetazoa:T10F2.4.2 UCSC:T10F2.4.1
WormBase:T10F2.4 InParanoid:Q10051 NextBio:889292 Uniprot:Q10051
Length = 492
Score = 92 (37.4 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 37/160 (23%), Positives = 66/160 (41%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP D I G D+ ++I++++ V + GH+ + +AFS L + D ++
Sbjct: 347 HP-DGLIFGTGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSENGYYLATGSEDGEVK 405
Query: 916 VWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVK 975
+W K KN + T Q + F FL + ++ + VK
Sbjct: 406 LWDL---RKLKN----LKTFANEEKQPINSLSFDMTGT-FLGIGGQKVQVLH------VK 451
Query: 976 QWVP----RESSAPITHATFSCDSQLVYACFLDATVCVFS 1011
W + S P+T F +++ + C LD ++ VFS
Sbjct: 452 SWSEVVSLSDHSGPVTGVRFGENARSLVTCSLDKSLRVFS 491
Score = 84 (34.6 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY 491
V +Y Y ++V Q + H +N + HP+ + I+ D I+VW AT+ + +
Sbjct: 233 VVLYDYEK-EQVMQTFK--GHNKKINAVVL-HPDN-ITAISASADSHIRVWSATDSSSKA 287
Query: 492 IFEGHEAPVYSV 503
I + H+APV +
Sbjct: 288 IIDVHQAPVTDI 299
Score = 78 (32.5 bits), Expect = 3.8e-06, Sum P(4) = 3.8e-06
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+T G DKT+ ++D F+GH + +V H +NI I ++A D I+ W +
Sbjct: 225 LTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLH-PDNITAISASA-DSHIRVWSATD 282
Query: 531 LGSR--VD-YEAPGRWCTTMAYSADG 553
S+ +D ++AP T ++ +A G
Sbjct: 283 SSSKAIIDVHQAP---VTDISLNASG 305
Score = 56 (24.8 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 17/66 (25%), Positives = 29/66 (43%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP-ASPRIRFNKDGCLLAVSTN 626
+ + + + L+A DD F D+ S + L + + G A I F+ DG +
Sbjct: 299 ISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFGTGAA 358
Query: 627 DNGIKI 632
D +KI
Sbjct: 359 DAVVKI 364
Score = 50 (22.7 bits), Expect = 1.0e-06, Sum P(4) = 1.0e-06
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 54 NRYSMKIFFEIRKQKYLEALDKHDRA-KAVEILVKDL----KVFSTFNEELFKEITQLLT 108
N +S++ +I +Q+ +L +HD A + + L K+L + ST ++ ++
Sbjct: 89 NSFSLRQQLQIARQELSHSLYQHDAACRVISRLSKELTAAREALSTLKPHTSAKVDDDVS 148
Query: 109 LENFRENEQLSK 120
++ + + LS+
Sbjct: 149 IDESEDQQGLSE 160
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 128 (50.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 43/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S A D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSAARDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 125 (49.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 46 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 101
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 102 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 158
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 159 GYCVKTFTGHREWVRMVRPNQDGT 182
Score = 66 (28.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 173 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 232
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 233 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 286
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 287 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 342
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 105 (42.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 51/109 (46%)
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
P+GS A ++ +++ +G + + + H G V ++ ++ L + DK
Sbjct: 76 PNGSTLASAGFDRLILLWNVYG--DCDNYATLKGHSGAVMELHYNTDGSML--FSASTDK 131
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T+ VWD+ G + +GH + V S P + Q + + + DG +K W
Sbjct: 132 TVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQLVCTGSDDGTVKLW 179
Score = 102 (41.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 380 ERLVLRNFKVWDL-GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYH 438
+RL+L +W++ G C A +K +V + ++ DGS+ A + V ++
Sbjct: 87 DRLIL----LWNVYGDCD---NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSE 139
Query: 439 GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
G+ V++ + H VN + QL V T DD T+K+WD A F+ +
Sbjct: 140 TGERVKR---LKGHTSFVNSCYPARRGPQL-VCTGSDDGTVKLWDIRKKAAIQTFQ-NTY 194
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRW--CTTMAYSADGT 554
V +V + I S +D IK W D +++ Y G T ++ S++G+
Sbjct: 195 QVLAVT--FNDTSDQIISGGIDNDIKVW--DLRQNKLTYTMRGHADSVTGLSLSSEGS 248
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH+ +TGL+ S + L+S+ D+ + VW
Sbjct: 206 DQIISGGIDND-IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/194 (18%), Positives = 79/194 (40%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
++ G DD +++++++R + ++ ++ + F+ + ++S G D+ + VW
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW---- 220
Query: 922 WEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLV-VHETQLAIFETT----KLECVK- 975
+ ++N+ G A S T + + + L + + +++ K CVK
Sbjct: 221 -DLRQNKLTYTMRGH---ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 276
Query: 976 -QWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSS 1034
Q + ++S D + A D V V+ + ++ + LP S
Sbjct: 277 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK------LPGHAGSI 330
Query: 1035 NVHPLVIAAHPQEP 1048
N +A HP EP
Sbjct: 331 NE----VAFHPDEP 340
Score = 67 (28.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 29/153 (18%), Positives = 59/153 (38%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L ++ G + + + +G L + D
Sbjct: 199 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR--GHADSVTGLSLSSEGSYLLSNAMD 256
Query: 628 NGIKILAT---SDGIRLLRTFENLAYDASRTSENSK--PTISPIXXXXXXXXXXXXXXXX 682
N +++ + R ++ F+ ++ + P S I
Sbjct: 257 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 316
Query: 683 XXXMVSIPGMNGDVRSLA--DVKPRITEESNDK 713
+ +PG G + +A +P I S+DK
Sbjct: 317 RRILYKLPGHAGSINEVAFHPDEPIIISASSDK 349
Score = 67 (28.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D + IA G D + +++ + KL GH+ I +AF +++S+ +D +L
Sbjct: 296 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRL 351
Score = 37 (18.1 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 582 DDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
DD ++K WD+ + + + A + FN + DN IK+
Sbjct: 172 DDGTVKLWDIRKKAAIQTFQNTYQVLA---VTFNDTSDQIISGGIDNDIKV 219
>UNIPROTKB|Q6DIF4 [details] [associations]
symbol:wdr1 "WD repeat-containing protein 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005884 "actin filament"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0030043 "actin filament fragmentation" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884
GO:GO:0030043 HSSP:Q02793 HOVERGEN:HBG000780 CTD:9948 EMBL:BC075588
RefSeq:NP_001006781.1 UniGene:Str.22875 ProteinModelPortal:Q6DIF4
STRING:Q6DIF4 GeneID:448473 KEGG:xtr:448473 Xenbase:XB-GENE-489897
Uniprot:Q6DIF4
Length = 607
Score = 133 (51.9 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 60/201 (29%), Positives = 91/201 (45%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
VN V +SPDGS A + + +Y G++V AH GG+ +++S + QL
Sbjct: 192 VNCVRFSPDGSRLASAGADGQIFLYDGKTGEKVGNLGGSKAHDGGIYAVSWSADSTQL-- 249
Query: 471 ITCGDDKTIKVWD-ATNGAKQYIFEGHEAPVYSV-CPHHKENIQFIFSTALDGKIKAWLY 528
++ DKT K+WD A N A G E + C K+ ++ S +L G I +L
Sbjct: 250 LSASGDKTAKIWDVAANSAVTTFHLGTEVLDQQLGCLWQKD---YLLSVSLSGYIN-YLD 305
Query: 529 DNLGSRVDYEAPGR----WCTTMAYSADGTRT-YQGFRKRSLGVVQFDTTKN-RFLAAGD 582
N SR G C T+ +++DG T Y G + +T +N F G
Sbjct: 306 KNNPSRPLRVIKGHNKSIQCMTV-HNSDGRSTIYTGSHDGHINYWDAETGENDTFTGKGH 364
Query: 583 DFSIKFWDMDSV-QLLT-SID 601
+ D+DS QL+T S+D
Sbjct: 365 TNQVSRMDLDSSNQLITCSMD 385
Score = 69 (29.3 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 17/66 (25%), Positives = 39/66 (59%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKR--ITGLAFSHALNVLVSSGADSQLCVWS-S 919
+A+G D ++ +Y+++ + +K + K + +T LA+SH L + A+ + V++ +
Sbjct: 460 VAVGGVDGNVHLYSIQGNSLKDEGKSLPVKGAVTDLAYSHDGAFLAVTDANKVVTVFNVA 519
Query: 920 DGWEKQ 925
DG+ +Q
Sbjct: 520 DGYSEQ 525
Score = 53 (23.7 bits), Expect = 6.5e-05, Sum P(3) = 6.5e-05
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLK-GHSKRITGLAFSHALNVLVSSGADSQL 914
+ D +A+ + + ++NV + + GH + +A+S SSG D +
Sbjct: 497 YSHDGAFLAVTDANKVVTVFNVADGYSEQNVYYGHHAKAVSVAWSPDNEHFASSGMDMMV 556
Query: 915 CVWS-SD 920
VW+ SD
Sbjct: 557 YVWTLSD 563
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 369 GDIGLWEVGSRERLVLRNFKV 389
G + LW+ GS + N KV
Sbjct: 128 GSVFLWDTGSSVGEISGNIKV 148
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 105 (42.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 51/109 (46%)
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
P+GS A ++ +++ +G + + + H G V ++ ++ L + DK
Sbjct: 77 PNGSTLASAGFDRLILLWNVYG--DCDNYATLKGHSGAVMELHYNTDGSML--FSASTDK 132
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T+ VWD+ G + +GH + V S P + Q + + + DG +K W
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQLVCTGSDDGTVKLW 180
Score = 102 (41.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 380 ERLVLRNFKVWDL-GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYH 438
+RL+L +W++ G C A +K +V + ++ DGS+ A + V ++
Sbjct: 88 DRLIL----LWNVYGDCD---NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSE 140
Query: 439 GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
G+ V++ + H VN + QL V T DD T+K+WD A F+ +
Sbjct: 141 TGERVKR---LKGHTSFVNSCYPARRGPQL-VCTGSDDGTVKLWDIRKKAAIQTFQ-NTY 195
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRW--CTTMAYSADGT 554
V +V + I S +D IK W D +++ Y G T ++ S++G+
Sbjct: 196 QVLAVT--FNDTSDQIISGGIDNDIKVW--DLRQNKLTYTMRGHADSVTGLSLSSEGS 249
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH+ +TGL+ S + L+S+ D+ + VW
Sbjct: 207 DQIISGGIDND-IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 70 (29.7 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 30/153 (19%), Positives = 59/153 (38%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L ++ G + + + +G L + D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR--GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 628 NGIKILAT---SDGIRLLRTFENLAYDASRTSENSK--PTISPIXXXXXXXXXXXXXXXX 682
N +++ + R +R F+ ++ + P S I
Sbjct: 258 NTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 683 XXXMVSIPGMNGDVRSLA--DVKPRITEESNDK 713
+ +PG G + +A +P I S+DK
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Score = 65 (27.9 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 10/56 (17%), Positives = 31/56 (55%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
++ G DD +++++++R + ++ ++ + F+ + ++S G D+ + VW
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW 221
Score = 65 (27.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D + IA G D + +++ + KL GH+ I +AF +++S+ +D +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 582 DDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
DD ++K WD+ + + + A + FN + DN IK+
Sbjct: 173 DDGTVKLWDIRKKAAIQTFQNTYQVLA---VTFNDTSDQIISGGIDNDIKV 220
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 105 (42.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 51/109 (46%)
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
P+GS A ++ +++ +G + + + H G V ++ ++ L + DK
Sbjct: 77 PNGSTLASAGFDRLILLWNVYG--DCDNYATLKGHSGAVMELHYNTDGSML--FSASTDK 132
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T+ VWD+ G + +GH + V S P + Q + + + DG +K W
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQLVCTGSDDGTVKLW 180
Score = 102 (41.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 380 ERLVLRNFKVWDL-GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYH 438
+RL+L +W++ G C A +K +V + ++ DGS+ A + V ++
Sbjct: 88 DRLIL----LWNVYGDCD---NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSE 140
Query: 439 GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
G+ V++ + H VN + QL V T DD T+K+WD A F+ +
Sbjct: 141 TGERVKR---LKGHTSFVNSCYPARRGPQL-VCTGSDDGTVKLWDIRKKAAIQTFQ-NTY 195
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRW--CTTMAYSADGT 554
V +V + I S +D IK W D +++ Y G T ++ S++G+
Sbjct: 196 QVLAVT--FNDTSDQIISGGIDNDIKVW--DLRQNKLTYTMRGHADSVTGLSLSSEGS 249
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH+ +TGL+ S + L+S+ D+ + VW
Sbjct: 207 DQIISGGIDND-IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/194 (18%), Positives = 79/194 (40%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
++ G DD +++++++R + ++ ++ + F+ + ++S G D+ + VW
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW---- 221
Query: 922 WEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLV-VHETQLAIFETT----KLECVK- 975
+ ++N+ G A S T + + + L + + +++ K CVK
Sbjct: 222 -DLRQNKLTYTMRGH---ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 976 -QWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSS 1034
Q + ++S D + A D V V+ + ++ + LP S
Sbjct: 278 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK------LPGHAGSI 331
Query: 1035 NVHPLVIAAHPQEP 1048
N +A HP EP
Sbjct: 332 NE----VAFHPDEP 341
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/153 (18%), Positives = 59/153 (38%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L ++ G + + + +G L + D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR--GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 628 NGIKILAT---SDGIRLLRTFENLAYDASRTSENSK--PTISPIXXXXXXXXXXXXXXXX 682
N +++ + R ++ F+ ++ + P S I
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 683 XXXMVSIPGMNGDVRSLA--DVKPRITEESNDK 713
+ +PG G + +A +P I S+DK
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Score = 65 (27.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D + IA G D + +++ + KL GH+ I +AF +++S+ +D +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 582 DDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
DD ++K WD+ + + + A + FN + DN IK+
Sbjct: 173 DDGTVKLWDIRKKAAIQTFQNTYQVLA---VTFNDTSDQIISGGIDNDIKV 220
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 105 (42.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 51/109 (46%)
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
P+GS A ++ +++ +G + + + H G V ++ ++ L + DK
Sbjct: 77 PNGSTLASAGFDRLILLWNVYG--DCDNYATLKGHSGAVMELHYNTDGSML--FSASTDK 132
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T+ VWD+ G + +GH + V S P + Q + + + DG +K W
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQLVCTGSDDGTVKLW 180
Score = 102 (41.0 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 380 ERLVLRNFKVWDL-GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYH 438
+RL+L +W++ G C A +K +V + ++ DGS+ A + V ++
Sbjct: 88 DRLIL----LWNVYGDCD---NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSE 140
Query: 439 GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
G+ V++ + H VN + QL V T DD T+K+WD A F+ +
Sbjct: 141 TGERVKR---LKGHTSFVNSCYPARRGPQL-VCTGSDDGTVKLWDIRKKAAIQTFQ-NTY 195
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRW--CTTMAYSADGT 554
V +V + I S +D IK W D +++ Y G T ++ S++G+
Sbjct: 196 QVLAVT--FNDTSDQIISGGIDNDIKVW--DLRQNKLTYTMRGHADSVTGLSLSSEGS 249
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH+ +TGL+ S + L+S+ D+ + VW
Sbjct: 207 DQIISGGIDND-IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/194 (18%), Positives = 79/194 (40%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
++ G DD +++++++R + ++ ++ + F+ + ++S G D+ + VW
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW---- 221
Query: 922 WEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLV-VHETQLAIFETT----KLECVK- 975
+ ++N+ G A S T + + + L + + +++ K CVK
Sbjct: 222 -DLRQNKLTYTMRGH---ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 976 -QWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSS 1034
Q + ++S D + A D V V+ + ++ + LP S
Sbjct: 278 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK------LPGHAGSI 331
Query: 1035 NVHPLVIAAHPQEP 1048
N +A HP EP
Sbjct: 332 NE----VAFHPDEP 341
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/153 (18%), Positives = 59/153 (38%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L ++ G + + + +G L + D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR--GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 628 NGIKILAT---SDGIRLLRTFENLAYDASRTSENSK--PTISPIXXXXXXXXXXXXXXXX 682
N +++ + R ++ F+ ++ + P S I
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 683 XXXMVSIPGMNGDVRSLA--DVKPRITEESNDK 713
+ +PG G + +A +P I S+DK
Sbjct: 318 RRILYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Score = 65 (27.9 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D + IA G D + +++ + KL GH+ I +AF +++S+ +D +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
Score = 37 (18.1 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 582 DDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
DD ++K WD+ + + + A + FN + DN IK+
Sbjct: 173 DDGTVKLWDIRKKAAIQTFQNTYQVLA---VTFNDTSDQIISGGIDNDIKV 220
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 105 (42.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 26/109 (23%), Positives = 51/109 (46%)
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
P+GS A ++ +++ +G + + + H G V ++ ++ L + DK
Sbjct: 77 PNGSTLASAGFDRLILLWNVYG--DCDNYATLKGHSGAVMELHYNTDGSML--FSASTDK 132
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T+ VWD+ G + +GH + V S P + Q + + + DG +K W
Sbjct: 133 TVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQLVCTGSDDGTVKLW 180
Score = 103 (41.3 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 380 ERLVLRNFKVWDL-GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYH 438
+RL+L +W++ G C A +K +V + ++ DGS+ A + V ++
Sbjct: 88 DRLIL----LWNVYGDCD---NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSE 140
Query: 439 GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
G+ V++ + H VN + QL V T DD T+K+WD A F+ +
Sbjct: 141 TGERVKR---LKGHTSFVNSCYPARRGPQL-VCTGSDDGTVKLWDIRKKAAVQTFQ-NTY 195
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRW--CTTMAYSADGT 554
V +V + I S +D IK W D +++ Y G T ++ S++G+
Sbjct: 196 QVLAVT--FNDTSDQIISGGIDNDIKVW--DLRQNKLTYTMRGHADSVTGLSLSSEGS 249
Score = 87 (35.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH+ +TGL+ S + L+S+ D+ + VW
Sbjct: 207 DQIISGGIDND-IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 263
Score = 68 (29.0 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 36/194 (18%), Positives = 79/194 (40%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
++ G DD +++++++R + ++ ++ + F+ + ++S G D+ + VW
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW---- 221
Query: 922 WEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLV-VHETQLAIFETT----KLECVK- 975
+ ++N+ G A S T + + + L + + +++ K CVK
Sbjct: 222 -DLRQNKLTYTMRGH---ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 277
Query: 976 -QWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSS 1034
Q + ++S D + A D V V+ + ++ + LP S
Sbjct: 278 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYK------LPGHAGSI 331
Query: 1035 NVHPLVIAAHPQEP 1048
N +A HP EP
Sbjct: 332 NE----VAFHPDEP 341
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/153 (18%), Positives = 59/153 (38%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L ++ G + + + +G L + D
Sbjct: 200 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR--GHADSVTGLSLSSEGSYLLSNAMD 257
Query: 628 NGIKILAT---SDGIRLLRTFENLAYDASRTSENSK--PTISPIXXXXXXXXXXXXXXXX 682
N +++ + R ++ F+ ++ + P S I
Sbjct: 258 NTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTS 317
Query: 683 XXXMVSIPGMNGDVRSLA--DVKPRITEESNDK 713
+ +PG G + +A +P I S+DK
Sbjct: 318 RRVLYKLPGHAGSINEVAFHPDEPIILSASSDK 350
Score = 66 (28.3 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D + IA G D + +++ V KL GH+ I +AF +++S+ +D +L
Sbjct: 297 DGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRL 352
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 117 (46.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 37/116 (31%), Positives = 49/116 (42%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P SL A ++++ Y GD R + H V DI+F K L
Sbjct: 111 VTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERT---LKGHTDSVQDISFDQTGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
+C D TIK+WD GH+ V SV N I S + D +K W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTMKMW 219
Score = 76 (31.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 34/177 (19%), Positives = 66/177 (37%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N +LA SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ HP
Sbjct: 298 GSENKKS------GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGR 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+++ DD +++I++ + L H +T L F A +V+ D + VW
Sbjct: 352 FVVSCA-DDKTLRIWDYKNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVW 407
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 100 (40.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 38/152 (25%), Positives = 68/152 (44%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYS 436
GSR++ V ++W ++ ++ + + +V V + DG F A V+++S
Sbjct: 79 GSRDKTV----RIW---VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWS 131
Query: 437 YHGGDEVRQHL--EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFE 494
H RQ + H+ V FS P+ +L +++ DDKT+K+WD T+ + +
Sbjct: 132 TH-----RQKFLFSLSQHINWVRCAKFS-PDGRL-IVSASDDKTVKLWDKTSRECVHSYC 184
Query: 495 GHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H V V H I + +D +K W
Sbjct: 185 EHGGFVTYVDFHPSGTC--IAAAGMDNTVKVW 214
Score = 94 (38.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 27/107 (25%), Positives = 48/107 (44%)
Query: 809 VPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGM 867
V C S + ++SAS K + L++ HP I A GM
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 868 DDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D++ +++++VR + + HS + L+F + N LV++ +DS L
Sbjct: 208 DNT-VKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTL 253
Score = 91 (37.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N ++ DS+++I ++ + L GH T +AFS S G+D Q+
Sbjct: 238 HPSGNYLVTAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 916 VWSSD 920
VW S+
Sbjct: 297 VWKSN 301
Score = 74 (31.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 27/127 (21%), Positives = 51/127 (40%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H V + FS KQL + D + VW + Y F GH+ V C + +
Sbjct: 18 HRDAVTSVDFSLNTKQLA--SGSMDSCLMVWHMKPQTRAYRFAGHKDAV--TCVNFSPSG 73
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFD 571
+ S + D ++ W+ + G + A ++ + +DG +++ V +
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKV--WS 131
Query: 572 TTKNRFL 578
T + +FL
Sbjct: 132 THRQKFL 138
Score = 71 (30.1 bits), Expect = 2.0e-06, Sum P(3) = 2.0e-06
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 569 QFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDN 628
+F ++A DD ++K WD S + + S GG + F+ G +A + DN
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY--VDFHPSGTCIAAAGMDN 209
Query: 629 GIKI 632
+K+
Sbjct: 210 TVKV 213
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 98 (39.6 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 36/152 (23%), Positives = 68/152 (44%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYS 436
GSR++ V ++W ++ ++ + + +V V + DG F A ++++S
Sbjct: 110 GSRDKTV----RIW---VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKVWS 162
Query: 437 YHGGDEVRQHL--EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFE 494
H RQ + H+ V FS P+ +L +++ DDKT+K+WD T+ + +
Sbjct: 163 TH-----RQKFLFSLSQHINWVRCAKFS-PDGRL-IVSASDDKTVKLWDKTSRECVHSYC 215
Query: 495 GHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H V V H + + +D +K W
Sbjct: 216 EHGGFVTYVDFHPSGTC--VAAAGMDNTVKVW 245
Score = 93 (37.8 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 26/107 (24%), Positives = 48/107 (44%)
Query: 809 VPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGM 867
V C S + ++SAS K + L++ HP + A GM
Sbjct: 179 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGM 238
Query: 868 DDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D++ +++++VR + + HS + L+F + N LV++ +DS L
Sbjct: 239 DNT-VKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTL 284
Score = 91 (37.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N ++ DS+++I ++ + L GH T +AFS S G+D Q+
Sbjct: 269 HPSGNYLVTAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 327
Query: 916 VWSSD 920
VW S+
Sbjct: 328 VWKSN 332
Score = 73 (30.8 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 27/127 (21%), Positives = 52/127 (40%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H V + FS KQL + D + VW ++ Y F GH+ V C + +
Sbjct: 49 HRDAVTCVDFSFNMKQLA--SGSMDSCLMVWHMKPQSRAYRFTGHKDAV--TCVNFSPSG 104
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFD 571
+ S + D ++ W+ + G + A ++ + +DG +++ V +
Sbjct: 105 HLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIKV--WS 162
Query: 572 TTKNRFL 578
T + +FL
Sbjct: 163 THRQKFL 169
Score = 70 (29.7 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 569 QFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDN 628
+F ++A DD ++K WD S + + S GG + F+ G +A + DN
Sbjct: 183 KFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTY--VDFHPSGTCVAAAGMDN 240
Query: 629 GIKI 632
+K+
Sbjct: 241 TVKV 244
>UNIPROTKB|E1BS49 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006952 "defense response" evidence=IEA] [GO:0043531
"ADP binding" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IEA] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IEA] [GO:0016505
"apoptotic protease activator activity" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0051402 "neuron apoptotic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 GO:GO:0005634 GO:GO:0005794
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051402
GO:GO:0043531 GO:GO:0006309 GO:GO:0008635 Gene3D:1.10.533.10
InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293 GO:GO:0016505
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AADN02005970
IPI:IPI00822148 ProteinModelPortal:E1BS49
Ensembl:ENSGALT00000038230 ArrayExpress:E1BS49 Uniprot:E1BS49
Length = 1254
Score = 110 (43.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 26/89 (29%), Positives = 44/89 (49%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY 491
+Q++ G+ + LEI AH + FS +K V TC DK +K+W++ G Y
Sbjct: 638 LQVFKAESGERL---LEISAHDDEILCCTFSADDKY--VATCSADKKVKIWNSRTGKCLY 692
Query: 492 IFEGHEAPVYSVCPHHKENIQFIFSTALD 520
++E H V + C + Q++ +T D
Sbjct: 693 VYEEHTEQV-NCCQFNNRRGQYLLATCSD 720
Score = 94 (38.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 30/185 (16%), Positives = 74/185 (40%)
Query: 799 DVTDSNPEEAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQ 858
D + E V C + S++ ++ + K+ LF+
Sbjct: 794 DEQQDDVEVLVKCCSWSRSSDTILVVAKNKLLLFDVTTSNLLTQVIISHHSTIQYCDFCA 853
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
+ ++A+ + SI+++N++ + +GH+ + + FS ++ ++S D + +W
Sbjct: 854 GDELVAVALSHCSIELWNIKSLSKVADCRGHTSWVHCVTFSSDGSLFLTSSEDQTIRIWE 913
Query: 919 SDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVH-ETQLAIFETTKLECVKQW 977
++ K + L+ S+ V FH ++ L ++ + + + + Q
Sbjct: 914 TNKVCKSSDAVLK----------SELDVVFHNGEVMILAIYNQKHIQLINGNTDSIIMQT 963
Query: 978 VPRES 982
P+ES
Sbjct: 964 EPQES 968
Score = 70 (29.7 bits), Expect = 7.7e-05, Sum P(4) = 7.7e-05
Identities = 23/113 (20%), Positives = 46/113 (40%)
Query: 806 EEAVPCFALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAI 865
+EA+ FA +N + + G + ++N P + +
Sbjct: 1050 KEAIKDFAFLENSKLLSWSFDGTVKVWNITTGKTEKDFACHRGAVLSCAVSPDGSRFSST 1109
Query: 866 GMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADS-QLCVW 917
D ++ +I++ V +LKGH + AFS + N L+++G D + +W
Sbjct: 1110 SADKTA-KIWSFESSSVLHELKGHEACVRCSAFSPS-NKLLATGDDKGDIRIW 1160
Score = 52 (23.4 bits), Expect = 7.7e-05, Sum P(4) = 7.7e-05
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 740 TKISRLIFTNSGNAILALASNAIHLLWKWQRTE 772
T + FT +++ A +A+ +W WQ E
Sbjct: 1010 TSVQHCRFTTDCQTLISSAHDAVIQVWNWQLNE 1042
Score = 48 (22.0 bits), Expect = 7.7e-05, Sum P(4) = 7.7e-05
Identities = 18/78 (23%), Positives = 38/78 (48%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F + + FL + +D +I+ W+ + V S DA L + + F+ ++ N
Sbjct: 891 VTFSSDGSLFLTSSEDQTIRIWETNKV--CKSSDAV--LKSELDVVFHNGEVMILAIYNQ 946
Query: 628 NGIKIL-ATSDGIRLLRT 644
I+++ +D I +++T
Sbjct: 947 KHIQLINGNTDSI-IMQT 963
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHTGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDFKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVEDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 125 (49.1 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 42/144 (29%), Positives = 57/144 (39%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ Y GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT---LKGHTDSVQDISFDHSGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVQT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGT 554
+ W + + DGT
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGT 247
Score = 66 (28.3 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 31/177 (17%), Positives = 64/177 (36%)
Query: 744 RLIFTNSGNAILALASNAIHL-LWKWQRTERNSSGKATASVAPQL-WQPPSGIMMTNDVT 801
R++ N ++A SN + +W E + + V + W P S ++ T
Sbjct: 238 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEAT 297
Query: 802 DSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDN 860
S +++ K +++S S K I +++ H
Sbjct: 298 GSETKKS------GKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 351
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I++ DD ++++++ + L H +T L F +V+ D + VW
Sbjct: 352 FILSCA-DDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 105 (42.0 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 26/109 (23%), Positives = 51/109 (46%)
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
P+GS A ++ +++ +G + + + H G V ++ ++ L + DK
Sbjct: 76 PNGSTLASAGFDRLILLWNVYG--DCDNYATLKGHSGAVMELHYNTDGSML--FSASTDK 131
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T+ VWD+ G + +GH + V S P + Q + + + DG +K W
Sbjct: 132 TVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQLVCTGSDDGTVKLW 179
Score = 87 (35.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 17/58 (29%), Positives = 39/58 (67%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH+ +TGL+ S + L+S+ D+ + VW
Sbjct: 206 DQIISGGIDND-IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVW 262
Score = 68 (29.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 36/194 (18%), Positives = 79/194 (40%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
++ G DD +++++++R + ++ ++ + F+ + ++S G D+ + VW
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW---- 220
Query: 922 WEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLV-VHETQLAIFETT----KLECVK- 975
+ ++N+ G A S T + + + L + + +++ K CVK
Sbjct: 221 -DLRQNKLTYTMRGH---ADSVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKI 276
Query: 976 -QWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSS 1034
Q + ++S D + A D V V+ + ++ + LP S
Sbjct: 277 FQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYK------LPGHAGSI 330
Query: 1035 NVHPLVIAAHPQEP 1048
N +A HP EP
Sbjct: 331 NE----VAFHPDEP 340
Score = 62 (26.9 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 15/65 (23%), Positives = 32/65 (49%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L ++ G + + + +G L + D
Sbjct: 199 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR--GHADSVTGLSLSSEGSYLLSNAMD 256
Query: 628 NGIKI 632
N +++
Sbjct: 257 NTVRV 261
Score = 56 (24.8 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSG 909
D + IA G D + +++ + KL GH+ I +AF H ++ +G
Sbjct: 296 DGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAF-HPDEPIIETG 345
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 136 (52.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 44/138 (31%), Positives = 60/138 (43%)
Query: 419 DGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAH-VGGVNDIAFSHPNKQLCVITCGDDK 477
D + F A V+I+S G LE AH GVN + + + ++T DDK
Sbjct: 152 DTNTFASACLDRTVKIWSL-GSPHANFTLE--AHETKGVNHVDYYPQADKPYLLTTSDDK 208
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN--LGSRV 535
T+KVWD T A EGH + V C +H E + I S + DG IK W + L +
Sbjct: 209 TVKVWDYTTKALIATLEGHTSNVSFAC-YHPE-LPVIISGSEDGTIKIWHANTYRLEQSL 266
Query: 536 DYEAPGRWCTTMAYSADG 553
Y WC + G
Sbjct: 267 SYGLERAWCVSYQRGKQG 284
Score = 123 (48.4 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 34/103 (33%), Positives = 53/103 (51%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAK-Q 490
++IY+Y+ +++ +AH + IA HP + V+T DD TIK+WD G K
Sbjct: 79 LRIYNYNTSEKIAS---FEAHPDYIRSIAV-HPTQPF-VLTASDDMTIKLWDWEKGWKCV 133
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGS 533
++EGH V + + K+ F S LD +K W +LGS
Sbjct: 134 QVYEGHSHYVMGLAINPKDTNTFA-SACLDRTVKIW---SLGS 172
Score = 76 (31.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 13/73 (17%), Positives = 38/73 (52%)
Query: 856 HPQ-DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
+PQ D + DD ++++++ + + L+GH+ ++ + L V++S D +
Sbjct: 193 YPQADKPYLLTTSDDKTVKVWDYTTKALIATLEGHTSNVSFACYHPELPVIISGSEDGTI 252
Query: 915 CVWSSDGWEKQKN 927
+W ++ + +++
Sbjct: 253 KIWHANTYRLEQS 265
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 99 (39.9 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 809 VPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGM 867
V C S + ++SAS K + L++ HP I A GM
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 868 DDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D++ +++++VR + + HS + GL+F + N L+++ +DS L
Sbjct: 208 DNT-VKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTL 253
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 36/152 (23%), Positives = 68/152 (44%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYS 436
GSR++ V ++W ++ ++ + + +V V + DG F A V++++
Sbjct: 79 GSRDKTV----RIW---VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWA 131
Query: 437 YHGGDEVRQHL--EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFE 494
H RQ + H+ V FS P+ +L +++ DDKT+K+WD ++ + +
Sbjct: 132 TH-----RQKFLFSLSQHINWVRCAKFS-PDGRL-IVSASDDKTVKLWDKSSRECVHSYC 184
Query: 495 GHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H V V H I + +D +K W
Sbjct: 185 EHGGFVTYVDFHPSGTC--IAAAGMDNTVKVW 214
Score = 92 (37.4 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I DS+++I ++ + L GH T +AFS S G+D Q+
Sbjct: 238 HPSGNYLITAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 916 VWSSD 920
VW S+
Sbjct: 297 VWKSN 301
Score = 72 (30.4 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 569 QFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDN 628
+F ++A DD ++K WD S + + S GG + F+ G +A + DN
Sbjct: 152 KFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY--VDFHPSGTCIAAAGMDN 209
Query: 629 GIKI 632
+K+
Sbjct: 210 TVKV 213
Score = 70 (29.7 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 23/102 (22%), Positives = 42/102 (41%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H V + FS KQL + D + VW ++ Y F GH+ V C + +
Sbjct: 18 HRDAVTCVDFSINTKQLA--SGSMDSCLMVWHMKPQSRAYRFTGHKDAV--TCVNFSPSG 73
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADG 553
+ S + D ++ W+ + G + A ++ + +DG
Sbjct: 74 HLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDG 115
>UNIPROTKB|G4MUL1 [details] [associations]
symbol:MGG_07284 "Target-rapamycin complex subunit LST8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0001558 "regulation of cell growth"
evidence=ISS] [GO:0006810 "transport" evidence=ISS] [GO:0007165
"signal transduction" evidence=ISS] [GO:0010008 "endosome membrane"
evidence=ISS] [GO:0030295 "protein kinase activator activity"
evidence=ISS] [GO:0030950 "establishment or maintenance of actin
cytoskeleton polarity" evidence=ISS] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=ISS] [GO:0031505
"fungal-type cell wall organization" evidence=ISS] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=ISS] [GO:0031931
"TORC1 complex" evidence=ISS] [GO:0031932 "TORC2 complex"
evidence=ISS] [GO:0045860 "positive regulation of protein kinase
activity" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0000139 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558 GO:GO:0031929
GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030295
GO:GO:0010008 GO:GO:0031930 GO:GO:0031505 GO:GO:0031931
GO:GO:0030950 EMBL:CM001232 GO:GO:0031932 GO:GO:0031234 KO:K08266
RefSeq:XP_003715510.1 ProteinModelPortal:G4MUL1
EnsemblFungi:MGG_07284T0 GeneID:2683030 KEGG:mgr:MGG_07284
Uniprot:G4MUL1
Length = 317
Score = 141 (54.7 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 44/146 (30%), Positives = 64/146 (43%)
Query: 388 KVWDL--GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQ 445
+ W+ G CS +Q P VNR+ SPD F A H V++Y +
Sbjct: 15 RFWEALSGICSRTIQ-----HPDSQVNRLCISPD-KRFLAAAGHHTVKLYDIKSTNP-NA 67
Query: 446 HLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCP 505
L + H G V +AF K + +T +D T+K+W+ G Q + H++PV V
Sbjct: 68 LLTFEGHTGNVTGVAFHCEGKWM--VTSSEDGTVKIWETRTGTIQRSYN-HQSPVNDVVI 124
Query: 506 HHKENIQFIFSTALDGKIKAW-LYDN 530
H + I S G I+ W L DN
Sbjct: 125 HPNQGE--IISCDRAGTIRLWDLADN 148
Score = 41 (19.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 10/37 (27%), Positives = 19/37 (51%)
Query: 881 EVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
E+++ L H + + AFS LV++ +D +W
Sbjct: 251 ELEATLANHQRWVWDCAFSADSAYLVTACSDHYARLW 287
Score = 41 (19.5 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 701 DVKPRITEESNDKSKVWKLTELSEPNQCRSLRLPENLRAT 740
DVK T ++ +K+W++ EP +P L AT
Sbjct: 218 DVKKLATCSADHTAKIWEVDV--EPTLQAGKAVPFELEAT 255
Score = 41 (19.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 884 SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSD 920
++ H + IT + S + L + AD +W D
Sbjct: 201 TQFSAHDQYITRVLLSPDVKKLATCSADHTAKIWEVD 237
>UNIPROTKB|F1NII4 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001826 "inner cell mass cell differentiation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 PRINTS:PR00319 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 EMBL:AADN02025808 EMBL:AADN02025807
IPI:IPI00592422 ProteinModelPortal:F1NII4
Ensembl:ENSGALT00000007475 Uniprot:F1NII4
Length = 498
Score = 95 (38.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 41/170 (24%), Positives = 66/170 (38%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
+ WDL P A K V + WSPDG + ++ G+++ + L
Sbjct: 152 RFWDLST-ETPQFTA--KGHRHWVLSIAWSPDGKKLASGCKNSQIFLWDPATGNQIGRVL 208
Query: 448 EIDAHVGGVNDIAFS--HPNKQLC--VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV 503
H + + + H N + C + + D +I++WD G I GH V
Sbjct: 209 T--GHSKWITCLCWEPLHINPE-CRYLASASKDGSIRIWDTLMGRCDKILTGHTQSV--T 263
Query: 504 CPHHKENIQFIFSTALDGKIKAWL-YDNLGSRVDYEAPGRWCTTMAYSAD 552
C + ++S++ D IK W D + R + W TMA S D
Sbjct: 264 CVKWGGD-GLLYSSSQDRTIKVWRSQDGILCRT-LQGHAHWVNTMALSTD 311
Score = 94 (38.1 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D IIA D SI+++ R + + L+GH + +A+S +LVS +DS L VW
Sbjct: 396 DTRIIASASFDKSIKLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDSTLKVWD 455
Query: 919 SD 920
++
Sbjct: 456 AE 457
Score = 71 (30.1 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV 503
++ H V +AFS K L + D T++ WD + Q+ +GH V S+
Sbjct: 123 LEGHTEAVISVAFSPTGKYLA--SGSGDTTVRFWDLSTETPQFTAKGHRHWVLSI 175
Score = 71 (30.1 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 27/78 (34%), Positives = 39/78 (50%)
Query: 576 RFLA-AGDDFSIKFWDMDSVQLLTSIDA--DGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
R+LA A D SI+ WD L+ D G + +++ DG LL S+ D IK+
Sbjct: 230 RYLASASKDGSIRIWDT----LMGRCDKILTGHTQSVTCVKWGGDG-LLYSSSQDRTIKV 284
Query: 633 LATSDGIRLLRTFENLAY 650
+ DGI L RT + A+
Sbjct: 285 WRSQDGI-LCRTLQGHAH 301
Score = 52 (23.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 18/74 (24%), Positives = 31/74 (41%)
Query: 494 EGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGR--WCTTMAYSA 551
EGH V SV +++ S + D ++ W D + A G W ++A+S
Sbjct: 124 EGHTEAVISVA--FSPTGKYLASGSGDTTVRFW--DLSTETPQFTAKGHRHWVLSIAWSP 179
Query: 552 DGTRTYQGFRKRSL 565
DG + G + +
Sbjct: 180 DGKKLASGCKNSQI 193
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 144 (55.7 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 46/164 (28%), Positives = 69/164 (42%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGD---EVRQHL-EIDAHVGGVNDIAFSHPNK 466
VN V W P GSL +I++ ++R+H EI ++PNK
Sbjct: 451 VNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNK 510
Query: 467 QLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
QL + + D T+K+WDA G F GH PVYS+ N ++I S +LD I W
Sbjct: 511 QLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLA--FSPNGEYIASGSLDKSIHIW 568
Query: 527 LYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQF 570
G V + ++ +G + F S+ V+ F
Sbjct: 569 SIKE-GKIVKTYTGNGGIFEVCWNKEGNKIAACFADNSVCVLDF 611
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 145 (56.1 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 33/78 (42%), Positives = 41/78 (52%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
I AH GV DIAFS PN +TCGDD IK+W+ NG ++ GH V S H
Sbjct: 214 ISAHANGVRDIAFS-PNDSK-FLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWH-- 269
Query: 509 ENIQFIFSTALDGKIKAW 526
N+ I S + D +K W
Sbjct: 270 PNLGLIVSGSKDNLVKLW 287
Score = 46 (21.3 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 876 NVRVDEVKSKLKGHSKRITGLAFSHAL-NVLVSSGADSQLCVWS 918
N +D V+ H K I + + H L ++L ++G+D WS
Sbjct: 402 NNTIDAVQKIPYAHEKAIHAVEY-HPLGHLLCTAGSDKTARFWS 444
Score = 43 (20.2 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 578 LAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGC--LLAVSTNDNGIKI--L 633
++ D +K WD S ++++ G + RF +G LLA + D +I L
Sbjct: 276 VSGSKDNLVKLWDPRSANCVSTLH--GFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDL 333
Query: 634 ATSDGIRLLRTFE 646
T + ++R E
Sbjct: 334 RTMKDMLVIRDSE 346
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 145 (56.1 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 33/78 (42%), Positives = 41/78 (52%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
I AH GV DIAFS PN +TCGDD IK+W+ NG ++ GH V S H
Sbjct: 214 ISAHANGVRDIAFS-PNDSK-FLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADWH-- 269
Query: 509 ENIQFIFSTALDGKIKAW 526
N+ I S + D +K W
Sbjct: 270 PNLGLIVSGSKDNLVKLW 287
Score = 46 (21.3 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 876 NVRVDEVKSKLKGHSKRITGLAFSHAL-NVLVSSGADSQLCVWS 918
N +D V+ H K I + + H L ++L ++G+D WS
Sbjct: 402 NNTIDAVQKIPYAHEKAIHAVEY-HPLGHLLCTAGSDKTARFWS 444
Score = 43 (20.2 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 578 LAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGC--LLAVSTNDNGIKI--L 633
++ D +K WD S ++++ G + RF +G LLA + D +I L
Sbjct: 276 VSGSKDNLVKLWDPRSANCVSTLH--GFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDL 333
Query: 634 ATSDGIRLLRTFE 646
T + ++R E
Sbjct: 334 RTMKDMLVIRDSE 346
>UNIPROTKB|G8JKX8 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:DAAA02002931 EMBL:DAAA02002930 EMBL:DAAA02002932
Ensembl:ENSBTAT00000019767 Uniprot:G8JKX8
Length = 713
Score = 123 (48.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 52 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 106
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 107 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 165
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 166 SGGDKPY 172
Score = 72 (30.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ +F L ++++ D + +W
Sbjct: 169 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Query: 919 S 919
S
Sbjct: 229 S 229
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 110 (43.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 34/130 (26%), Positives = 58/130 (44%)
Query: 399 LQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVND 458
L +V+ +V +S DG + +Q++ G+++ L+I AH V
Sbjct: 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL---LDIKAHEDEVLC 662
Query: 459 IAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPH--HKENIQFIFS 516
AFS + + TC DK +K+WD+ G + +E H V C H +K N + +
Sbjct: 663 CAFSSDDSYIA--TCSVDKKVKIWDSGTGKLVHTYEEHSEQVN--CCHFTNKSNHLLLAT 718
Query: 517 TALDGKIKAW 526
+ D +K W
Sbjct: 719 GSNDSFLKLW 728
Score = 85 (35.0 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 21/69 (30%), Positives = 37/69 (53%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGW 922
+A G ++ +I+I + + V S GH K + + F+ L+SS DS + VW+ W
Sbjct: 976 VAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWN---W 1032
Query: 923 EKQKNRFLQ 931
+ ++ FLQ
Sbjct: 1033 QTEEYVFLQ 1041
Score = 62 (26.9 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 869 DSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADS-QLCVWS-SDG 921
D + +I++ + +LKGH+ + AFS +L+++G D+ ++ +W+ SDG
Sbjct: 1106 DKTAKIWSFELPSPLHELKGHNSCVRCSAFSLD-GILLATGDDNGEIRIWNVSDG 1159
Score = 55 (24.4 bits), Expect = 0.00084, Sum P(4) = 0.00084
Identities = 12/61 (19%), Positives = 27/61 (44%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+D+ +++ D +++++NV ++ H + A S S+ AD +W
Sbjct: 1054 RDSRLLSWSFD-GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Query: 918 S 918
S
Sbjct: 1113 S 1113
Score = 53 (23.7 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F + FL A DD +I+ W+ V ++I L + F ++ ++ N
Sbjct: 888 VMFSPDGSSFLTASDDQTIRVWETRKVCKNSAIV----LKQEIDVVFQENEMMVLAVDNI 943
Query: 628 NGIKILATSDG 638
G++++A G
Sbjct: 944 RGLQLIAGKTG 954
Score = 51 (23.0 bits), Expect = 0.00018, Sum P(4) = 0.00018
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 742 ISRLIFTNSGNAILALASNAIHLLWKWQRTE 772
+ + FT G +++ + +++ +W WQ E
Sbjct: 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQTEE 1036
>UNIPROTKB|E1C016 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030126 "COPI
vesicle coat" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AADN02024196
IPI:IPI00598430 RefSeq:XP_422637.2 ProteinModelPortal:E1C016
Ensembl:ENSGALT00000008592 GeneID:424823 KEGG:gga:424823
NextBio:20827098 Uniprot:E1C016
Length = 913
Score = 123 (48.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 81 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 136 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 194
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 195 SGGDKPY 201
Score = 74 (31.1 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ ++F L ++++ D + +W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVSFHPELPIIITGSEDGTVRIWH 257
Query: 919 S 919
S
Sbjct: 258 S 258
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 98 (39.6 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
SV V ++ DG S +++Y+ G + H + H G+ D+ + NKQL
Sbjct: 16 SVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMI--H-SFEEHGYGIGDLVSTSDNKQL- 71
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEG-HEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
+C + K + WD +G F+ H + SVC + + +FS + D +KAW
Sbjct: 72 -FSCAE-KQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTL--LFSGSSDRLVKAW 125
Score = 88 (36.0 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+++I G +D+ IY + ++ SKL GHS IT + + N ++S D + +W
Sbjct: 263 DDSLIISGSEDNDFYIYELLSGKLLSKLSGHSNIITHVDSHPSKNQFITSSTDCTIRIW 321
>MGI|MGI:1917493 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0035327
"transcriptionally active chromatin" evidence=ISO] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0055087
"Ski complex" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1917493 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309554 EMBL:AK012342 EMBL:AK013114
EMBL:AK142498 EMBL:AK153862 EMBL:AK167706 EMBL:BC023026
IPI:IPI00112320 RefSeq:NP_001020546.1 RefSeq:NP_075680.1
UniGene:Mm.28437 ProteinModelPortal:Q9ERF3 SMR:Q9ERF3 IntAct:Q9ERF3
PhosphoSite:Q9ERF3 PaxDb:Q9ERF3 PRIDE:Q9ERF3
Ensembl:ENSMUST00000051822 Ensembl:ENSMUST00000121204 GeneID:66317
KEGG:mmu:66317 InParanoid:Q9ERF3 NextBio:321305 Bgee:Q9ERF3
CleanEx:MM_WDR61 Genevestigator:Q9ERF3
GermOnline:ENSMUSG00000061559 Uniprot:Q9ERF3
Length = 305
Score = 90 (36.7 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I+IY+V+ + L GH+ + +AF VSS +D + VW
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 82 (33.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 451 AHVGGVNDIAFSHPNKQLC--VITCGDDKTIKVWDATNGAK--QYIFEGHEAPVYSVCPH 506
AH + +A+ K+ V+T D +KVW + Q+ EGH+ V SV
Sbjct: 14 AHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDIS 73
Query: 507 HKENIQFIFSTALDGKIKAWLYDNLGSR---VDYEAPGRWCTTMAYSADGTRTYQGFRKR 563
H + S++LD I+ W +N G + +D W T+A+S D G
Sbjct: 74 H--TLPIAASSSLDAHIRLWDLEN-GKQMKSIDAGPVDAW--TLAFSPDSQYLATGTHMG 128
Query: 564 SLGVVQFDTTKNRF 577
+ + ++ K +
Sbjct: 129 KVNIFGVESGKKEY 142
Score = 78 (32.5 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV D + +AA D I+ WD+++ + + SIDA G + A + F+ D LA
Sbjct: 65 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDA-GPVDAWT-LAFSPDSQYLA 122
Query: 623 VSTNDNGIKILATSDG 638
T+ + I G
Sbjct: 123 TGTHMGKVNIFGVESG 138
Score = 58 (25.5 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 494 EGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAW 526
+ H+ ++SV + KENI+ + + +LD +K W
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVW 47
>POMBASE|SPBC16C6.13c [details] [associations]
symbol:sec27 "coatomer beta' subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC16C6.13c
GO:GO:0005829 GO:GO:0005634 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0030126 GO:GO:0006890
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
OMA:LRNKAFG PIR:T39962 RefSeq:XP_001713153.1
ProteinModelPortal:O42937 STRING:O42937 EnsemblFungi:SPBC16C6.13c.1
GeneID:2540050 KEGG:spo:SPBC16C6.13c OrthoDB:EOG48H0BF
NextBio:20801187 GO:GO:0032511 Uniprot:O42937
Length = 796
Score = 131 (51.2 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKV--WDATNGAK 489
V++Y+Y+ G++V Q +AH + + HP + ++T DD TIK WD +
Sbjct: 80 VRVYNYNTGEKVTQ---FEAHPDYIRALVV-HPTQPF-LLTSSDDMTIKCFNWDMSWKCV 134
Query: 490 QYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAY 549
Q FEGH V S+ + K+ F S+ LDG +K W + + + +A R + Y
Sbjct: 135 Q-TFEGHSRYVMSLAINPKDTNTFA-SSCLDGTVKVWSFGSSVANFTLQAHDRGVNYVNY 192
Query: 550 SADGTRTY 557
G + Y
Sbjct: 193 YPAGDKPY 200
Score = 127 (49.8 bits), Expect = 0.00042, P = 0.00042
Identities = 54/200 (27%), Positives = 82/200 (41%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY 491
V+++S+ G V + + AH GVN + + + +IT GDD IKVWD A
Sbjct: 166 VKVWSF--GSSVA-NFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVR 222
Query: 492 IFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW--LYDNLGSRVDYEAPGRWCTTMAY 549
I EGH V H K I I S + DG +K W L +L ++ WC +A
Sbjct: 223 ILEGHTNNVSFAFFHSKFPI--IISGSEDGTVKIWHTLSYSLIKSYNFSLDRAWC--IAQ 278
Query: 550 SADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPAS 609
+ D GF G++ F ++ D W + + I PA
Sbjct: 279 NKDNGLVTVGFDN---GLITFSLGRDEPSVTMDSSGKVVWSNYNEVMSAMIR-----PAK 330
Query: 610 PRIRFNKDGCLLAVSTNDNG 629
+ DG L+++S + G
Sbjct: 331 EQSDLT-DGSLISLSVKELG 349
Score = 64 (27.6 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 14/57 (24%), Positives = 31/57 (54%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHA-LNVLVSSGADSQLCVW 917
+I G DD+ I++++ + L+GH+ ++ AF H+ +++S D + +W
Sbjct: 201 LITAG-DDNLIKVWDYQTKACVRILEGHTNNVS-FAFFHSKFPIIISGSEDGTVKIW 255
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 105 (42.0 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 41/142 (28%), Positives = 64/142 (45%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H G VN AFS + L +T DD + VW +G + GH PV S C +
Sbjct: 25 HHGEVNCSAFSPDGRTL--LTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCC--FSPDG 80
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPG--RWCTTMAYSADGTRTYQG-FRKRSLGVV 568
+ I S++ D I+ W D S+ + G R T+++S D + G + KR++ V
Sbjct: 81 RLIASSSSDHSIRLW--DVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAI-VW 137
Query: 569 QFDTTKNRFLAAGDDFSIKFWD 590
+ + + L G SI+ D
Sbjct: 138 EVQSGRRVHLLVGHCDSIQSSD 159
Score = 88 (36.0 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 24/86 (27%), Positives = 42/86 (48%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V +SPDG L + S H ++++ + H+ + H V ++FS +KQL
Sbjct: 71 VKSCCFSPDGRLIASSSSDHSIRLWDVARSKCL--HV-LKGHQRSVETVSFSPDSKQLA- 126
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGH 496
+ G DK VW+ +G + ++ GH
Sbjct: 127 -SGGWDKRAIVWEVQSGRRVHLLVGH 151
Score = 79 (32.9 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 863 IAIGMDDSSIQIYNVRVDE-VKS--KLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+A G DS++ I+++R V S L+GH+ I+ L +S A +L S D +CVW
Sbjct: 167 LATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYS-ASGLLASGSWDKTICVW 223
Score = 69 (29.3 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ ++A G D +I ++ + + +LKGH+ + LAFS L S+G + VW
Sbjct: 208 SGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPDELKLASAGYSRTVKVW 265
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 119 (46.9 bits), Expect = 7.0e-06, Sum P(4) = 7.0e-06
Identities = 36/156 (23%), Positives = 75/156 (48%)
Query: 387 FKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQH 446
F +++L + +M Q ++ + +++ + + G + S+ + Q+ + E
Sbjct: 278 FGIYELPSFTMLYQLSITQS---NIDTLTVNSTGDWIAIGSSK-LGQLLVWEWQSE-SYV 332
Query: 447 LEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPH 506
L+ +H ++ + +S ++ +IT DD IKVWD +G F H + V +C
Sbjct: 333 LKQQSHYDALSTLQYSSDGQR--IITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFS 390
Query: 507 HKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGR 542
+ N+ +FS++LDG ++AW + + AP R
Sbjct: 391 KRGNV--LFSSSLDGSVRAWDLIRYRNFRTFTAPSR 424
Score = 72 (30.4 bits), Expect = 7.0e-06, Sum P(4) = 7.0e-06
Identities = 23/80 (28%), Positives = 36/80 (45%)
Query: 555 RTYQGFRKRSLGVVQFDTTKNRFLAAG--DDFSIKFWDMDSVQLLTSIDADGGLPASPRI 612
RT+ + + D + + AG D F I W + + QLL ++ G P S +
Sbjct: 417 RTFTAPSRVQFSCIAVDPS-GEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEG-PVSS-L 473
Query: 613 RFNKDGCLLAVSTNDNGIKI 632
FN G LLA + D ++I
Sbjct: 474 SFNSSGSLLASGSWDKTVRI 493
Score = 55 (24.4 bits), Expect = 7.0e-06, Sum P(4) = 7.0e-06
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 344 NQGSSPMSMDFHPVQQTLLLVGTNVGDIGLWEVGS 378
NQ S FHP LL+VG + G G++E+ S
Sbjct: 252 NQNSKLRCAAFHPTSN-LLVVGFSSGLFGIYELPS 285
Score = 37 (18.1 bits), Expect = 7.0e-06, Sum P(4) = 7.0e-06
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 878 RVDEVKSKLKGH-SKRITGLAFSHALNVLVSSGADSQLCVW 917
R D+ ++ +K T + +S + ++S+G +C++
Sbjct: 558 RFDDARTAENSSLNKTFTSICYSADGSCVLSAGTSKYVCLY 598
>UNIPROTKB|J9JHP3 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000044849 Uniprot:J9JHP3
Length = 1215
Score = 109 (43.4 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 399 LQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVND 458
L +V+ +V +S DG +Q++ G+++ LEI AH V
Sbjct: 614 LSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKAHEDEVLC 670
Query: 459 IAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIF-ST 517
AFS ++ + TC DK +K+W++ G ++++ H V C H N ++ +T
Sbjct: 671 CAFSTDDR--FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN--CCHFTNNSHYLLLAT 726
Query: 518 AL-DGKIKAW 526
A D +K W
Sbjct: 727 ASSDCFLKLW 736
Score = 90 (36.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGW 922
IA G +D +++I + + + GH K + + F+ L+SS DS + VW+ W
Sbjct: 941 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 997
Query: 923 EKQKNRFLQ 931
+ ++ FLQ
Sbjct: 998 QSEEYVFLQ 1006
>ZFIN|ZDB-GENE-010724-7 [details] [associations]
symbol:copb2 "coatomer protein complex, subunit beta
2" species:7955 "Danio rerio" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030903
"notochord development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-010724-7 GO:GO:0006886 GO:GO:0030117
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030903 CTD:9276
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:AY294011 IPI:IPI00487448 RefSeq:NP_001001940.1
UniGene:Dr.14625 ProteinModelPortal:Q6JWU7 STRING:Q6JWU7
PRIDE:Q6JWU7 GeneID:114454 KEGG:dre:114454 InParanoid:Q6JWU7
NextBio:20796938 ArrayExpress:Q6JWU7 Bgee:Q6JWU7 Uniprot:Q6JWU7
Length = 934
Score = 125 (49.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 36/127 (28%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP Q ++T DD IK+WD +
Sbjct: 81 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPT-QPYILTSSDDMLIKLWDWEKKWSCS 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 136 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHDKGVNCIDYY 194
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 195 SGGDKPY 201
Score = 71 (30.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ + F L ++++ D + +W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCVNFHPELPIIITGSEDGTVRIWH 257
Query: 919 S 919
S
Sbjct: 258 S 258
>UNIPROTKB|J9NS21 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
CTD:317 KO:K02084 InterPro:IPR017251 PIRSF:PIRSF037646
GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
RefSeq:XP_003432082.1 ProteinModelPortal:J9NS21
Ensembl:ENSCAFT00000049144 GeneID:482620 KEGG:cfa:482620
Uniprot:J9NS21
Length = 1250
Score = 109 (43.4 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 399 LQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVND 458
L +V+ +V +S DG +Q++ G+++ LEI AH V
Sbjct: 607 LSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKAHEDEVLC 663
Query: 459 IAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIF-ST 517
AFS ++ + TC DK +K+W++ G ++++ H V C H N ++ +T
Sbjct: 664 CAFSTDDR--FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN--CCHFTNNSHYLLLAT 719
Query: 518 AL-DGKIKAW 526
A D +K W
Sbjct: 720 ASSDCFLKLW 729
Score = 90 (36.7 bits), Expect = 7.5e-06, Sum P(2) = 7.5e-06
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGW 922
IA G +D +++I + + + GH K + + F+ L+SS DS + VW+ W
Sbjct: 977 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 1033
Query: 923 EKQKNRFLQ 931
+ ++ FLQ
Sbjct: 1034 QSEEYVFLQ 1042
>UNIPROTKB|F1Q410 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9615 "Canis lupus familiaris" [GO:0043531 "ADP binding"
evidence=IEA] [GO:0042981 "regulation of apoptotic process"
evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0006952 GO:GO:0042981
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OMA:KVCKNSA GeneTree:ENSGT00700000104017 EMBL:AAEX03009966
Ensembl:ENSCAFT00000010576 Uniprot:F1Q410
Length = 1258
Score = 109 (43.4 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 34/130 (26%), Positives = 59/130 (45%)
Query: 399 LQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVND 458
L +V+ +V +S DG +Q++ G+++ LEI AH V
Sbjct: 614 LSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKL---LEIKAHEDEVLC 670
Query: 459 IAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIF-ST 517
AFS ++ + TC DK +K+W++ G ++++ H V C H N ++ +T
Sbjct: 671 CAFSTDDR--FIATCSVDKKVKIWNSMTGGLVHVYDEHSEQVN--CCHFTNNSHYLLLAT 726
Query: 518 AL-DGKIKAW 526
A D +K W
Sbjct: 727 ASSDCFLKLW 736
Score = 90 (36.7 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGW 922
IA G +D +++I + + + GH K + + F+ L+SS DS + VW+ W
Sbjct: 984 IAFGGEDGAVEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLISSSDDSSIQVWN---W 1040
Query: 923 EKQKNRFLQ 931
+ ++ FLQ
Sbjct: 1041 QSEEYVFLQ 1049
>UNIPROTKB|B4DZI8 [details] [associations]
symbol:COPB2 "Coatomer protein complex, subunit beta 2
(Beta prime), isoform CRA_b" species:9606 "Homo sapiens"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005794
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005198 GO:GO:0015629 EMBL:CH471052
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InterPro:IPR016453 PIRSF:PIRSF005567
UniGene:Hs.681616 HGNC:HGNC:2232 ChiTaRS:COPB2 EMBL:AC024933
EMBL:AK302943 IPI:IPI00789674 SMR:B4DZI8 STRING:B4DZI8
Ensembl:ENST00000507777 Uniprot:B4DZI8
Length = 877
Score = 123 (48.4 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 52 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 106
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 107 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 165
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 166 SGGDKPY 172
Score = 72 (30.4 bits), Expect = 7.9e-06, Sum P(2) = 7.9e-06
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ +F L ++++ D + +W
Sbjct: 169 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 228
Query: 919 S 919
S
Sbjct: 229 S 229
>UNIPROTKB|Q32P44 [details] [associations]
symbol:EML3 "Echinoderm microtubule-associated protein-like
3" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0005874
HOGENOM:HOG000294061 HOVERGEN:HBG051470 InterPro:IPR005108
Pfam:PF03451 EMBL:AK093146 EMBL:AK128679 EMBL:BC108280
IPI:IPI00167909 IPI:IPI00843902 IPI:IPI00843958 RefSeq:NP_694997.2
UniGene:Hs.379785 ProteinModelPortal:Q32P44 SMR:Q32P44
IntAct:Q32P44 MINT:MINT-1682086 STRING:Q32P44 PhosphoSite:Q32P44
DMDM:121945710 PaxDb:Q32P44 PeptideAtlas:Q32P44 PRIDE:Q32P44
Ensembl:ENST00000394773 Ensembl:ENST00000494448
Ensembl:ENST00000529309 GeneID:256364 KEGG:hsa:256364
UCSC:uc001ntr.1 UCSC:uc001ntt.1 CTD:256364 GeneCards:GC11M062370
HGNC:HGNC:26666 neXtProt:NX_Q32P44 PharmGKB:PA142671910 OMA:EMELVKA
OrthoDB:EOG45755Z ChiTaRS:EML3 GenomeRNAi:256364 NextBio:92788
ArrayExpress:Q32P44 Bgee:Q32P44 CleanEx:HS_EML3
Genevestigator:Q32P44 Uniprot:Q32P44
Length = 896
Score = 103 (41.3 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 29/76 (38%), Positives = 40/76 (52%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKS----KLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D +AIG D+ I IY+V D KS + GHS IT L +S N ++S+ D ++
Sbjct: 691 DGLYLAIGSHDNVIYIYSVSSDGAKSSRFGRCMGHSSFITHLDWSKDGNFIMSNSGDYEI 750
Query: 915 CVWSSDGWEKQ-KNRF 929
W G KQ KNR+
Sbjct: 751 LYWDVAGGCKQLKNRY 766
Score = 76 (31.8 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 573 TKNRFLAAGDDFSIKFWDMDSVQLLTSIDA-DGGLPASPRIRFNKDGCLLAVSTNDNGIK 631
++NRFL G D + WD +S L SID + GL A F+ G ++AV N
Sbjct: 608 SQNRFLTCGHDRQLCLWDGESHALAWSIDLKETGLCAD----FHPSGAVVAVGLNTGRWL 663
Query: 632 ILAT 635
+L T
Sbjct: 664 VLDT 667
Score = 66 (28.3 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQ--LCVITCGDDKTIKVWDATNGAK 489
Q + + A GV +AFS ++ LCV+ ++ + VWD + G K
Sbjct: 351 QEIGLGAFERGVGALAFSAADQGAFLCVVDDSNEHMLSVWDCSRGMK 397
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(4) = 0.00023
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 389 VWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGG 440
VWD CS ++ A +K SV V ++P S V + V +++ GG
Sbjct: 389 VWD---CSRGMKLAEIKSTNDSVLAVGFNPRDSSCIVTSGKSHVHFWNWSGG 437
Score = 39 (18.8 bits), Expect = 8.4e-06, Sum P(4) = 8.4e-06
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 307 LPVNVLPVSFTGXXXXXXXXQAFSTPEDLPKTVTRTL 343
L + V P S G + + P LP T T +L
Sbjct: 44 LRLQVPPSSLQGSGTPAPPGDSLAAPPGLPPTCTPSL 80
>UNIPROTKB|Q9W7F2 [details] [associations]
symbol:wdr1-a "WD repeat-containing protein 1-A"
species:8355 "Xenopus laevis" [GO:0003779 "actin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005884 "actin filament"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030043 "actin filament fragmentation" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0003779
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR011045 SUPFAM:SSF50974
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005884 GO:GO:0030043
EMBL:AF124140 EMBL:BC041232 EMBL:BC077202 RefSeq:NP_001081923.1
UniGene:Xl.524 ProteinModelPortal:Q9W7F2 GeneID:398123
KEGG:xla:398123 CTD:398123 Xenbase:XB-GENE-6251934
HOVERGEN:HBG000780 Uniprot:Q9W7F2
Length = 607
Score = 118 (46.6 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 58/201 (28%), Positives = 87/201 (43%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
VN V +SPDGS A + + +Y G++V AH GG+ +++S QL
Sbjct: 192 VNCVRFSPDGSKLASAGADGQIFLYDGKTGEKVCSLGGSKAHDGGIYAVSWSPDGTQL-- 249
Query: 471 ITCGDDKTIKVWD-ATNGAKQYIFEGHEAPVYSV-CPHHKENIQFIFSTALDGKIKAWLY 528
++ DKT K+WD A N A G + + C K+ ++ S +L G I +L
Sbjct: 250 LSASGDKTTKIWDVAANSAVTTFNLGSDVLDQQLGCLWQKD---YLLSVSLSGYIN-YLD 305
Query: 529 DNLGSRVDYEAPGR----WCTTMAYSADGTRT-YQGFRKRSLGVVQFDTTKN-RFLAAGD 582
N +R G C T+ S DG T Y G + +T +N F G
Sbjct: 306 KNNPARPLRVIKGHNKSIQCMTVNNS-DGRSTIYTGSHDGHINYWDAETGENDTFTGKGH 364
Query: 583 DFSIKFWDMDSV-QLLT-SID 601
+ D+D QL+T S+D
Sbjct: 365 TNQVSSMDLDGCNQLITCSMD 385
Score = 73 (30.8 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 29/137 (21%), Positives = 62/137 (45%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKR--ITGLAFSHALNVLVSSGADSQLCVWS-S 919
+A+G D + +Y+++ + +K + K + +T LA+SH L + A+ + V+S +
Sbjct: 460 VAVGGADGKVHLYSIQGNSLKDEGKTLPAKGAVTDLAYSHDGAFLAVTDANKVVTVFSVA 519
Query: 920 DGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVV------HETQLAIFETTKLEC 973
DG+ +KN + A S F + +V +T++ + + +L
Sbjct: 520 DGYS-EKNSYYGHHAKALSVAWSPDNEHFASSGMDMMVYVWTLSDPDTRIKMPDAHRLHH 578
Query: 974 VKQ--WVPRESSAPITH 988
V W+ + A ++H
Sbjct: 579 VSSLAWLDEHTLATVSH 595
Score = 57 (25.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 28/126 (22%), Positives = 48/126 (38%)
Query: 799 DVTDSNPEEAVPCFALSKNDSYV-MSASGGKISLFNXXXXXXXXXXXXX-XXXXXXXXXH 856
D D PE AV A+ K V + + GK+ L++ +
Sbjct: 442 DSLDYEPE-AV---AIHKGSGTVAVGGADGKVHLYSIQGNSLKDEGKTLPAKGAVTDLAY 497
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVD-EVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
D +A+ + + +++V K+ GH + +A+S SSG D +
Sbjct: 498 SHDGAFLAVTDANKVVTVFSVADGYSEKNSYYGHHAKALSVAWSPDNEHFASSGMDMMVY 557
Query: 916 VWS-SD 920
VW+ SD
Sbjct: 558 VWTLSD 563
>MGI|MGI:1354962 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10090 "Mus musculus" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0005080 "protein kinase C binding" evidence=ISO]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISA;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 MGI:MGI:1354962
GO:GO:0005794 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891 GO:GO:0030126
CTD:9276 HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529
OMA:LRNKAFG EMBL:AK088064 EMBL:AK153352 EMBL:AF043120 EMBL:BC006675
IPI:IPI00115097 RefSeq:NP_056642.1 UniGene:Mm.400464
ProteinModelPortal:O55029 SMR:O55029 IntAct:O55029 STRING:O55029
PhosphoSite:O55029 PaxDb:O55029 PRIDE:O55029
Ensembl:ENSMUST00000035033 GeneID:50797 KEGG:mmu:50797
UCSC:uc009rdm.1 InParanoid:O55029 NextBio:307805 Bgee:O55029
Genevestigator:O55029 GermOnline:ENSMUSG00000032458 Uniprot:O55029
Length = 905
Score = 123 (48.4 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 81 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 136 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 194
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 195 SGGDKPY 201
Score = 72 (30.4 bits), Expect = 8.5e-06, Sum P(2) = 8.5e-06
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ +F L ++++ D + +W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 919 S 919
S
Sbjct: 258 S 258
>UNIPROTKB|P35605 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS;TAS]
[GO:0005794 "Golgi apparatus" evidence=ISS] [GO:0000139 "Golgi
membrane" evidence=ISS] [GO:0030126 "COPI vesicle coat"
evidence=ISS;IDA] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0005080 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005198 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 GO:GO:0006890 EMBL:X72756 EMBL:BC134537
IPI:IPI00706476 PIR:S35312 RefSeq:NP_776706.2 UniGene:Bt.4801
ProteinModelPortal:P35605 IntAct:P35605 STRING:P35605 PRIDE:P35605
GeneID:281706 KEGG:bta:281706 CTD:9276 HOGENOM:HOG000163444
HOVERGEN:HBG051076 InParanoid:P35605 OrthoDB:EOG43R3KZ
NextBio:20805628 InterPro:IPR016453 PIRSF:PIRSF005567
Uniprot:P35605
Length = 906
Score = 123 (48.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 81 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 136 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 194
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 195 SGGDKPY 201
Score = 72 (30.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ +F L ++++ D + +W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 919 S 919
S
Sbjct: 258 S 258
>UNIPROTKB|E2R667 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 InterPro:IPR016453 PIRSF:PIRSF005567
GeneTree:ENSGT00640000091529 OMA:LRNKAFG EMBL:AAEX03013631
ProteinModelPortal:E2R667 Ensembl:ENSCAFT00000012160 Uniprot:E2R667
Length = 906
Score = 123 (48.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 81 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 136 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 194
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 195 SGGDKPY 201
Score = 72 (30.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ +F L ++++ D + +W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 919 S 919
S
Sbjct: 258 S 258
>UNIPROTKB|P35606 [details] [associations]
symbol:COPB2 "Coatomer subunit beta'" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=TAS] [GO:0030126 "COPI vesicle coat" evidence=IDA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0015629 "actin
cytoskeleton" evidence=IDA] Reactome:REACT_11123 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198 GO:GO:0015629
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006891
GO:GO:0030126 GO:GO:0048205 GO:GO:0006890 CTD:9276
HOGENOM:HOG000163444 HOVERGEN:HBG051076 OrthoDB:EOG43R3KZ
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG EMBL:X70476
EMBL:BC000326 IPI:IPI00220219 PIR:S35342 RefSeq:NP_004757.1
UniGene:Hs.681616 ProteinModelPortal:P35606 SMR:P35606
DIP:DIP-27603N IntAct:P35606 MINT:MINT-5000992 STRING:P35606
PhosphoSite:P35606 DMDM:544076 PaxDb:P35606 PeptideAtlas:P35606
PRIDE:P35606 DNASU:9276 Ensembl:ENST00000333188 GeneID:9276
KEGG:hsa:9276 UCSC:uc003etf.4 GeneCards:GC03M139076 HGNC:HGNC:2232
HPA:HPA036867 MIM:606990 neXtProt:NX_P35606 PharmGKB:PA26748
InParanoid:P35606 PhylomeDB:P35606 ChiTaRS:COPB2 GenomeRNAi:9276
NextBio:34765 ArrayExpress:P35606 Bgee:P35606 CleanEx:HS_COPB2
Genevestigator:P35606 GermOnline:ENSG00000184432 Uniprot:P35606
Length = 906
Score = 123 (48.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 81 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 136 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 194
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 195 SGGDKPY 201
Score = 72 (30.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ +F L ++++ D + +W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 919 S 919
S
Sbjct: 258 S 258
>UNIPROTKB|F1SL54 [details] [associations]
symbol:COPB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=IEA] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006891 GO:GO:0030126 CTD:9276 InterPro:IPR016453
PIRSF:PIRSF005567 GeneTree:ENSGT00640000091529 OMA:LRNKAFG
EMBL:CU582855 RefSeq:XP_001926139.3 UniGene:Ssc.51974
Ensembl:ENSSSCT00000012767 GeneID:100156939 KEGG:ssc:100156939
Uniprot:F1SL54
Length = 906
Score = 123 (48.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 81 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 136 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 194
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 195 SGGDKPY 201
Score = 72 (30.4 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 13/61 (21%), Positives = 31/61 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + L+GH++ ++ +F L ++++ D + +W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWH 257
Query: 919 S 919
S
Sbjct: 258 S 258
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 121 (47.7 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 56/221 (25%), Positives = 94/221 (42%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
+ +VWD+ ++ +Q A + S++ ++ DG V+++ G
Sbjct: 368 KQIRVWDITTRTIRIQFAGHEQDIYSLD---FARDGRTIASGSGDRTVRLWDIENGTA-- 422
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGD-DKTIKVWDATNGAKQYIFEG---HEAPV 500
L + GV +A S K + G DK+++VWD T G EG H+ V
Sbjct: 423 --LTVFTIEDGVTTVAISPDTKY---VAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSV 477
Query: 501 YSVCPHHKENIQFIFSTALDGKIKAW-LYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQG 559
YSV N + + + +LD IK W L G+ + + G C +T++G
Sbjct: 478 YSVA--FSPNGRDLVTGSLDKTIKLWELATPRGNMQNQGSKGGRCV---------KTFEG 526
Query: 560 FRKRSLGVVQFDTTKNRFLAAGD-DFSIKFWD--MDSVQLL 597
R L V T N+++ +G D ++FWD S QL+
Sbjct: 527 HRDFVLSVAL--TPDNQWVMSGSKDRGVQFWDPRTGSTQLM 565
Score = 113 (44.8 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 45/164 (27%), Positives = 73/164 (44%)
Query: 414 VIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGG---VNDIAFSHPNKQLCV 470
V +S DG +R QI+ + G++V + +A G + + FS K L
Sbjct: 305 VRFSADGKYVATGCNRS-AQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYLA- 362
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
T +DK I+VWD T + F GHE +YS+ + + I S + D ++ W +N
Sbjct: 363 -TGAEDKQIRVWDITTRTIRIQFAGHEQDIYSL--DFARDGRTIASGSGDRTVRLWDIEN 419
Query: 531 LGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTK 574
G+ + TT+A S D G +S+ V +D T+
Sbjct: 420 -GTALTVFTIEDGVTTVAISPDTKYVAAGSLDKSVRV--WDLTQ 460
Score = 68 (29.0 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 14/60 (23%), Positives = 25/60 (41%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
DN + G D +Q ++ R + L+GH + +A S + D + +WS
Sbjct: 539 DNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSVISVAPSPTGGFFATGSGDMRARIWS 598
Score = 54 (24.1 bits), Expect = 8.6e-06, Sum P(3) = 8.6e-06
Identities = 21/68 (30%), Positives = 31/68 (45%)
Query: 243 SNPPTVTHPAVSG--GAIG---LGSPSIPAA--ALKHP---RTP--PTNPSVDYPSGDSD 290
S PP T G GAIG G P+ P + +P ++P P +P+ D+P G +
Sbjct: 186 SQPPQSTASPGPGKRGAIGRPPAGGPATPQINNPMPYPGPGQSPQVPNHPTPDHPRGLAQ 245
Query: 291 HLSKRTRP 298
H + P
Sbjct: 246 HQPPQPPP 253
>UNIPROTKB|E3NCB9 [details] [associations]
symbol:Cre-npp-20 "CRE-NPP-20 protein" species:31234
"Caenorhabditis remanei" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005643 GO:GO:0000910 OMA:IKLWKEE EMBL:DS268594
RefSeq:XP_003093969.1 ProteinModelPortal:E3NCB9
EnsemblMetazoa:CRE15709 GeneID:9811680 CTD:9811680 Uniprot:E3NCB9
Length = 311
Score = 118 (46.6 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 43/174 (24%), Positives = 73/174 (41%)
Query: 420 GSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTI 479
G+ S +V+I+ + +E+ H G V ++++HP + + DK +
Sbjct: 25 GNRLATCGSDRLVKIFEVRPNGQSYPLIELSGHNGPVWKVSWAHPKYGGLLASAAYDKKV 84
Query: 480 KVWDATNGA--KQYIFEGHEAPVYSVC-PHHKENIQFIFSTALDGKIKAWLYDNLGSRVD 536
+W NG K Y + HEA SV H+ + ++ S++ DG I YD++
Sbjct: 85 IIWQEINGRWQKSYEWACHEASTTSVAFAPHQYGL-WLASSSADGDIGILRYDSV----- 138
Query: 537 YEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFD-TTKNRFLAAGDDFSIKFW 589
G+W ++ QG S D T K R ++AG+D K W
Sbjct: 139 ---TGQWQSSKIQKCHE----QGVNSVSWAPGSADPTAKKRLVSAGNDKCAKIW 185
Score = 64 (27.6 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 20/78 (25%), Positives = 42/78 (53%)
Query: 860 NNIIAIGMDDSSIQIY---NVRVDEVKSKLKGHSK-RITGLAFSHALNVLVSSGADSQLC 915
++I++ G++ + + +Y N+ DE KSKL S + +FS + L SG D+ +
Sbjct: 219 HSIVSCGLEGNLV-LYRNSNIETDEWKSKLLEKSPCPLYHASFSPCGSFLSVSGDDNMIT 277
Query: 916 VWSSDGWEKQKNRFLQIP 933
+W E + +++++P
Sbjct: 278 IWR----ENLQGQWIKVP 291
Score = 52 (23.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/110 (26%), Positives = 45/110 (40%)
Query: 895 GLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQ-IPTGRTPTAQSDTRVQFHQDQI 953
G A A LVS+G D +W +Q N F + + G T +
Sbjct: 163 GSADPTAKKRLVSAGNDKCAKIWVF----QQTNGFWRKLLNGHTDFVREAAWCPVTNKGQ 218
Query: 954 HFLVVH--ETQLAIFETTKLECVKQWVPR---ESSAPITHATFS-CDSQL 997
H +V E L ++ + +E +W + +S P+ HA+FS C S L
Sbjct: 219 HSIVSCGLEGNLVLYRNSNIE-TDEWKSKLLEKSPCPLYHASFSPCGSFL 267
>RGD|1308228 [details] [associations]
symbol:Wdr61 "WD repeat domain 61" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO;ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISO;ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISO;ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0055087 "Ski complex" evidence=ISO;ISS]
[GO:0080182 "histone H3-K4 trimethylation" evidence=ISO;ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1308228 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:BC098059 IPI:IPI00366523 RefSeq:NP_001020914.1 UniGene:Rn.3698
ProteinModelPortal:Q4V7A0 STRING:Q4V7A0 PRIDE:Q4V7A0 GeneID:363064
KEGG:rno:363064 UCSC:RGD:1308228 InParanoid:Q4V7A0 NextBio:682300
ArrayExpress:Q4V7A0 Genevestigator:Q4V7A0
GermOnline:ENSRNOG00000012803 Uniprot:Q4V7A0
Length = 305
Score = 90 (36.7 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I+IY+V+ + L GH+ + +AF VSS +D + VW
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 84 (34.6 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 451 AHVGGVNDIAFSHPNKQLC--VITCGDDKTIKVWDATNGAK--QYIFEGHEAPVYSVCPH 506
AH + +A+ K+ V+T D +KVW + Q+ EGH+ V SV
Sbjct: 14 AHDDAIWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDIS 73
Query: 507 HKENIQFIFSTALDGKIKAWLYDNLGSR---VDYEAPGRWCTTMAYSADGTRTYQGFRKR 563
H + S++LD I+ W +N G + +D W T+A+S D G
Sbjct: 74 H--TLPIAASSSLDAHIRLWDLEN-GKQMKSIDAGPVDAW--TLAFSPDSQHLATGTHMG 128
Query: 564 SLGVVQFDTTKNRF 577
+ + ++ K +
Sbjct: 129 KVNIFGVESGKKEY 142
Score = 76 (31.8 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV D + +AA D I+ WD+++ + + SIDA G + A + F+ D LA
Sbjct: 65 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDA-GPVDAWT-LAFSPDSQHLA 122
Query: 623 VSTNDNGIKILATSDG 638
T+ + I G
Sbjct: 123 TGTHMGKVNIFGVESG 138
Score = 58 (25.5 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 494 EGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAW 526
+ H+ ++SV + KENI+ + + +LD +K W
Sbjct: 13 QAHDDAIWSVAWETNKKENIETVVTGSLDDLVKVW 47
>POMBASE|SPBC21B10.05c [details] [associations]
symbol:pop3 "WD repeat protein Pop3" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0031929 "TOR signaling cascade" evidence=TAS] [GO:0031931
"TORC1 complex" evidence=IDA] [GO:0031932 "TORC2 complex"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC21B10.05c GO:GO:0005829 GO:GO:0005634
GO:GO:0000226 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0031929 EMBL:CU329671 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0031931 GO:GO:0031932
KO:K08266 HOGENOM:HOG000208395 OMA:NNKGNCY OrthoDB:EOG4GF6PT
EMBL:AB016895 PIR:T39922 RefSeq:NP_595682.1
ProteinModelPortal:O74184 IntAct:O74184 STRING:O74184
EnsemblFungi:SPBC21B10.05c.1 GeneID:2540645 KEGG:spo:SPBC21B10.05c
NextBio:20801769 Uniprot:O74184
Length = 314
Score = 126 (49.4 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 40/141 (28%), Positives = 65/141 (46%)
Query: 388 KVWDL--GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQ 445
+ W+ G CS +Q A D VNR+ SPD A + H V++Y + ++
Sbjct: 23 RFWEALSGICSRTIQHA---DS--QVNRLCISPDKKFLAAAGNPH-VRLYDINTSSQMPL 76
Query: 446 HLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCP 505
+ + H V IAF K L T +D T+KVWD + Q ++ H++PV +
Sbjct: 77 -MTFEGHTNNVTAIAFHCDGKWLA--TSSEDGTVKVWDMRAPSVQRNYD-HKSPVNDLLI 132
Query: 506 HHKENIQFIFSTALDGKIKAW 526
H + + S G+++AW
Sbjct: 133 HPNQGE--LLSCDQSGRVRAW 151
Score = 55 (24.4 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 885 KLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQ 931
K + H + IT S + L + AD+ + +WS++ R LQ
Sbjct: 210 KFQAHQRYITRCVLSPDVKHLATCSADATVNIWSTEDMSFMLERRLQ 256
Score = 51 (23.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 869 DSSIQIYNVRVDE--VKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS-SDG 921
D+++ I++ ++ +L+GH + + AFS LV++ +D +W S G
Sbjct: 236 DATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTASSDHVARLWELSSG 291
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 986 ITHATFSCDSQLVYACFLDATVCVFSAANL 1015
IT S D + + C DATV ++S ++
Sbjct: 218 ITRCVLSPDVKHLATCSADATVNIWSTEDM 247
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 139 (54.0 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 35/115 (30%), Positives = 59/115 (51%)
Query: 412 NRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVI 471
N V ++P+G+ A S H V+I+ +++ QH ++ H GGVN ++F HP+ +I
Sbjct: 190 NFVAFNPNGTCIASAGSDHTVKIWDIRV-NKLLQHYQV--HSGGVNCVSF-HPSGNY-LI 244
Query: 472 TCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T D T+K+ D G Y +GH PV++V + + S D ++ W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS--FSKGGELFTSGGADAQVLLW 297
Score = 97 (39.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 63/268 (23%), Positives = 106/268 (39%)
Query: 398 PLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVN 457
P+ K ++ V +SP+G + ++S + R + H +
Sbjct: 8 PVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLR--PQARAFRYV-GHKDVIT 64
Query: 458 DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFST 517
+ FS P L + + D+TI++W K F+ H APV SV + QF+ S
Sbjct: 65 SVQFS-PLGNL-LASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSV--DFSADGQFLASA 120
Query: 518 ALDGKIKAW-LYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNR 576
+ D IK W +Y Y W +S DG +++ + +DTT +
Sbjct: 121 SEDKSIKVWNMYRQRFLYSLYRHT-HWVRCAKFSPDGRLIVSCSEDKTIKI--WDTTNKQ 177
Query: 577 FLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRI---RFNK--------DGCLLAVST 625
+ DF + F + + + A G + +I R NK G + VS
Sbjct: 178 CVNNFSDF-VGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236
Query: 626 NDNG-IKILATSDG-IRLLRTFEN-LAY 650
+ +G I A+SDG +++L E L Y
Sbjct: 237 HPSGNYLITASSDGTLKILDLLEGRLIY 264
Score = 81 (33.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I D +++I ++ + L+GH+ + ++FS + S GAD+Q+
Sbjct: 237 HPSGNYLITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVL 295
Query: 916 VWSSD 920
+W ++
Sbjct: 296 LWRTN 300
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 103 (41.3 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 45/178 (25%), Positives = 79/178 (44%)
Query: 380 ERLVLRNFKVWDL-GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYH 438
+RL+L +W++ G C A +K +V + ++ DGS+ A + V ++
Sbjct: 114 DRLIL----LWNVYGDCD---NYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSE 166
Query: 439 GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
G+ V++ + H VN + QL V T DD T+K+WD A F+ +
Sbjct: 167 TGERVKR---LKGHTSFVNSCYPARRGPQL-VCTGSDDGTVKLWDIRKKAAVQTFQ-NTY 221
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRW--CTTMAYSADGT 554
V +V + I S +D IK W D +++ Y G T ++ S++G+
Sbjct: 222 QVLAVT--FNDTSDQIISGGIDNDIKVW--DLRQNKLTYTMRGHADSVTGLSLSSEGS 275
Score = 97 (39.2 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 25/109 (22%), Positives = 50/109 (45%)
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
P G+ A ++ +++ +G + + + H G V ++ ++ L + DK
Sbjct: 103 PWGNTLASAGFDRLILLWNVYG--DCDNYATLKGHSGAVMELHYNTDGSML--FSASTDK 158
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T+ VWD+ G + +GH + V S P + Q + + + DG +K W
Sbjct: 159 TVAVWDSETGERVKRLKGHTSFVNSCYPARR-GPQLVCTGSDDGTVKLW 206
Score = 86 (35.3 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 16/58 (27%), Positives = 39/58 (67%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ II+ G+D+ I+++++R +++ ++GH+ +TGL+ S + L+S+ D+ + +W
Sbjct: 233 DQIISGGIDND-IKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIW 289
Score = 72 (30.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 32/153 (20%), Positives = 59/153 (38%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ T ++ ++ G D IK WD+ +L ++ G + + + +G L + D
Sbjct: 226 VTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMR--GHADSVTGLSLSSEGSYLLSNAMD 283
Query: 628 NGIKILAT---SDGIRLLRTFENLAYDASRTSENSK--PTISPIXXXXXXXXXXXXXXXX 682
N ++I + R ++ F+ ++ + P S I
Sbjct: 284 NTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTS 343
Query: 683 XXXMVSIPGMNGDVRSLA--DVKPRITEESNDK 713
+ +PG G V LA +P I S+DK
Sbjct: 344 RRILYKLPGHAGSVNELAFHPEEPIILSASSDK 376
Score = 67 (28.6 bits), Expect = 0.00082, Sum P(3) = 0.00082
Identities = 36/194 (18%), Positives = 79/194 (40%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
++ G DD +++++++R + ++ ++ + F+ + ++S G D+ + VW
Sbjct: 193 LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVW---- 247
Query: 922 WEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLV-VHETQLAIFETT----KLECVK- 975
+ ++N+ G A S T + + + L + + I++ K CVK
Sbjct: 248 -DLRQNKLTYTMRGH---ADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKI 303
Query: 976 -QWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSS 1034
Q + ++S D + D V V+ + ++ + LP S
Sbjct: 304 FQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYK------LPGHAGSV 357
Query: 1035 NVHPLVIAAHPQEP 1048
N +A HP+EP
Sbjct: 358 NE----LAFHPEEP 367
Score = 65 (27.9 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQL 914
D + IA G D + +++ + KL GH+ + LAF +++S+ +D +L
Sbjct: 323 DGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRL 378
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 12/30 (40%), Positives = 12/30 (40%)
Query: 193 GQPNGARAPSPANNPLLGSLPKAGVFPPLG 222
G P P PA P GS P A P G
Sbjct: 10 GGPVPGPVPGPAPGPGAGSAPGAAPGPTPG 39
Score = 40 (19.1 bits), Expect = 2.7e-05, Sum P(3) = 2.7e-05
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 252 AVSGGAIGLGSPSIPAAALKHPRTPP 277
A G G P +P+AA K PR P
Sbjct: 32 AAPGPTPGPDLPLVPSAA-KRPRHDP 56
Score = 37 (18.1 bits), Expect = 5.4e-05, Sum P(3) = 5.4e-05
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 253 VSGGAIGLGSPSIPAAALKHPRTPPTNPSV 282
V G A G G+ S P AA P P P V
Sbjct: 17 VPGPAPGPGAGSAPGAA-PGPTPGPDLPLV 45
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 93 (37.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 36/152 (23%), Positives = 68/152 (44%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYS 436
GSR++ V ++W ++ ++ + + +V V + DG F A V++++
Sbjct: 41 GSRDKTV----RIW---VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVKVWA 93
Query: 437 YHGGDEVRQHL--EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFE 494
H RQ + H+ V FS P+ +L +++ DDKT+K+WD ++ + +
Sbjct: 94 TH-----RQKFLFSLSQHINWVRCAKFS-PDGRL-IVSASDDKTVKLWDKSSRECVHSYC 146
Query: 495 GHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
H V V H I + +D +K W
Sbjct: 147 EHGGFVTYVDFHPSGTC--IAAAGMDNTVKVW 176
Score = 92 (37.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I DS+++I ++ + L GH T +AFS S G+D Q+
Sbjct: 200 HPSGNYLITAS-SDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 258
Query: 916 VWSSD 920
VW S+
Sbjct: 259 VWKSN 263
Score = 72 (30.4 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 17/64 (26%), Positives = 30/64 (46%)
Query: 569 QFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDN 628
+F ++A DD ++K WD S + + S GG + F+ G +A + DN
Sbjct: 114 KFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTY--VDFHPSGTCIAAAGMDN 171
Query: 629 GIKI 632
+K+
Sbjct: 172 TVKV 175
Score = 61 (26.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 16/78 (20%), Positives = 33/78 (42%)
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRV 535
D + VW ++ Y F GH+ V C + + + S + D ++ W+ + G
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAV--TCVNFSPSGHLLASGSRDKTVRIWVPNVKGEST 59
Query: 536 DYEAPGRWCTTMAYSADG 553
+ A ++ + +DG
Sbjct: 60 VFRAHTATVRSVHFCSDG 77
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 103 (41.3 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 33/118 (27%), Positives = 51/118 (43%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
S+ RVI+ P +L A ++I+ + G+ R + H V D+AF K L
Sbjct: 110 SITRVIFHPIFALMVSASEDATIRIWDFETGEYERS---LKGHTDSVQDVAFDAQGKLLA 166
Query: 470 VITCGDDKTIKVWDATNGAKQY-IFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
+C D +IK+WD + GH+ V SV ++ S + D IK W
Sbjct: 167 --SCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVA--FVPAGDYVLSASRDRTIKMW 220
Score = 102 (41.0 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 48/226 (21%), Positives = 95/226 (42%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
SV V + G L + ++++ + E + + H V+ +AF
Sbjct: 152 SVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMH--GHDHNVSSVAFVPAGDY-- 207
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTAL-DGKIKAWLY 528
V++ D+TIK+W+ G + GH V V H + +I F+T D I+ WL
Sbjct: 208 VLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVRVHIEGSI---FATCSNDQTIRVWLT 264
Query: 529 DNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGD-DFSIK 587
++ +V+ +A++ + + + + + + FLA+G D +I+
Sbjct: 265 NSKDCKVELRDHEHTVECIAWAPEAAAS--AINEAAGADNKKGHHQGPFLASGSRDKTIR 322
Query: 588 FWDMD-SVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
WD+ + LLT D + + F+ G L +++D I++
Sbjct: 323 IWDVSVGLCLLTLSGHDNWVRG---LAFHPGGKYLVSASDDKTIRV 365
Score = 82 (33.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 20/55 (36%), Positives = 28/55 (50%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+A G D +I+I++V V L GH + GLAF LVS+ D + VW
Sbjct: 312 LASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRVW 366
Score = 76 (31.8 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 20/82 (24%), Positives = 36/82 (43%)
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC 504
+ + H + + F HP L +++ +D TI++WD G + +GH V V
Sbjct: 100 EKFSLTGHRASITRVIF-HPIFAL-MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVA 157
Query: 505 PHHKENIQFIFSTALDGKIKAW 526
+ + + S + D IK W
Sbjct: 158 FDAQGKL--LASCSADLSIKLW 177
Score = 67 (28.6 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 15/62 (24%), Positives = 28/62 (45%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP +++ DD +I+++++R L H T + F A ++S D +
Sbjct: 348 HPGGKYLVSAS-DDKTIRVWDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVK 406
Query: 916 VW 917
VW
Sbjct: 407 VW 408
Score = 53 (23.7 bits), Expect = 0.00071, Sum P(3) = 0.00071
Identities = 20/94 (21%), Positives = 40/94 (42%)
Query: 543 WCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDA 602
W +Y +T G ++ V F + L+A D +IK W++ + + +
Sbjct: 177 WDFQQSYEC--IKTMHG-HDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYT- 232
Query: 603 DGGLPASPRIRFNKDGCLLAVSTNDNGIKILATS 636
G +R + +G + A +ND I++ T+
Sbjct: 233 -GHREWVRMVRVHIEGSIFATCSNDQTIRVWLTN 265
Score = 43 (20.2 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 619 CLLAVSTNDNGIKILATSDGIRLL 642
CLL +S +DN ++ LA G + L
Sbjct: 331 CLLTLSGHDNWVRGLAFHPGGKYL 354
>UNIPROTKB|H0YN81 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC090607 HGNC:HGNC:30300 ChiTaRS:WDR61
Ensembl:ENST00000560569 Bgee:H0YN81 Uniprot:H0YN81
Length = 294
Score = 90 (36.7 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I+IY+V+ + L GH+ + +AF VSS +D + VW
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 81 (33.6 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 451 AHVGGVNDIAFSHPNKQLC--VITCGDDKTIKVWDATNGAK--QYIFEGHEAPVYSVCPH 506
AH + +A+ K+ V+T D +KVW + Q+ EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDIS 73
Query: 507 HKENIQFIFSTALDGKIKAWLYDNLGSRV---DYEAPGRWCTTMAYSADGTRTYQGFRKR 563
H + S++LD I+ W +N G ++ D W T+A+S D G
Sbjct: 74 H--TLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAW--TLAFSPDSQYLATGTHVG 128
Query: 564 SLGVVQFDTTKNRF 577
+ + ++ K +
Sbjct: 129 KVNIFGVESGKKEY 142
Score = 78 (32.5 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV D + +AA D I+ WD+++ + + SIDA G + A + F+ D LA
Sbjct: 65 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWT-LAFSPDSQYLA 122
Query: 623 VSTNDNGIKILATSDG 638
T+ + I G
Sbjct: 123 TGTHVGKVNIFGVESG 138
Score = 53 (23.7 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 494 EGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYE 538
+ H+ ++SV + KEN + + + +LD +K W + + R+D +
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRD--ERLDLQ 57
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 104 (41.7 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 41/152 (26%), Positives = 64/152 (42%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGV---SVNRVIWSPDGSLFGVAYSRHIVQIYSY---H 438
R K+W C+ L + P S+ V WSP G+ A V I+ H
Sbjct: 36 RVIKLW--AKCNDQLWGSSFSLPEAHKKSIRCVTWSPCGTYIASASFDGTVTIWKISEAH 93
Query: 439 GGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVW---DATNGAKQYIFEG 495
E+ + ++ H V +A+ P+ L + TCG DK++ +W D + + +
Sbjct: 94 SAPEMEALVSLEGHTSEVKCVAWC-PSGHL-IATCGRDKSVWLWEFDDEEDVQCVSVLQP 151
Query: 496 HEAPVYSVCPH-HKENIQFIFSTALDGKIKAW 526
H V SV H H E + ST+ D KI +
Sbjct: 152 HSQDVKSVAWHPHGE---VLVSTSYDNKINVY 180
Score = 75 (31.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDE--VKSKLKGHSKRITGLAFSHALNVLVSSGADSQ 913
HP +++ D+ I +Y +D+ V ++L GH + FS + ++L S D
Sbjct: 162 HPHGEVLVSTSYDNK-INVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILASCSDD-- 218
Query: 914 LCV--WSSDG 921
LCV WS +G
Sbjct: 219 LCVKLWSWEG 228
Score = 44 (20.5 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 991 FSCDSQLVYACFLDATVCVF 1010
+S DSQL+ +C D +C++
Sbjct: 255 WSPDSQLLASCGSDNRLCIY 274
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 127 (49.8 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 37/117 (31%), Positives = 55/117 (47%)
Query: 412 NRVIWSPDGSLFGVAY-SRHIVQIYSYHGGDEVRQHLEIDA-HVGGVNDIAFSHPNKQLC 469
N +W S FG + S ++ D Q L I A H+ V F HPN
Sbjct: 541 NYPVWDTQFSPFGYYFVSGGHDRVARLWATDHY-QPLRIFAGHLADVTCTRF-HPNSNY- 597
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
V T D+T+++WD NG IF GH+ P++S+ N +F+ S + DG++ W
Sbjct: 598 VATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLA--FSPNGKFLASGSTDGRVLLW 652
Score = 62 (26.9 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 14/58 (24%), Positives = 32/58 (55%)
Query: 576 RFLAAGD-DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+FLA+G D + WD+ ++ + G + ++F++DG ++A + DN +++
Sbjct: 638 KFLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYA--LKFSRDGEIIASGSIDNTVRL 693
Score = 46 (21.3 bits), Expect = 1.6e-05, Sum P(3) = 1.6e-05
Identities = 24/131 (18%), Positives = 61/131 (46%)
Query: 38 WDDVEKYLSGFTKVDDNRYSM-KIFFEIRKQKYLEALDKHDRAKAVEILVKDLKVFSTFN 96
+ D++K++ +D +R + ++F+ + YLE + + ++A K +
Sbjct: 174 YSDLKKFIESV--LDCHRAELSQLFYPLFVHMYLELVYNNHESEAKAFFDKFSGDQECYY 231
Query: 97 EELFKEITQLLTLENFRENEQLSKYGDTKSARSIMLVELKKLIEANPLFRDKLQFPNLKN 156
E+ + + L E+ + NE L D +++R ++ + ++ L + LQ +N
Sbjct: 232 EDDLRVLCGLTKKEHMKGNEALL---DFRTSRFVLRISR----DSYQLLKRHLQ--ERQN 282
Query: 157 SRLRTLINQSL 167
+++ +I + L
Sbjct: 283 NQIWNIIQEHL 293
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 134 (52.2 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 29/80 (36%), Positives = 44/80 (55%)
Query: 448 EIDA-HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPH 506
EIDA H + D+AFS + + +TC DD +K+W+ +NG ++ + GH V S C
Sbjct: 171 EIDAAHTESIRDMAFSSNDSKF--VTCSDDNILKIWNFSNGKQERVLSGHHWDVKS-CDW 227
Query: 507 HKENIQFIFSTALDGKIKAW 526
H E + I S + D +K W
Sbjct: 228 HPE-MGLIASASKDNLVKLW 246
Score = 50 (22.7 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 12/66 (18%), Positives = 34/66 (51%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNV--RVDE-VKSKLKGHSKRITGLAFSHALNVLVSSGADS 912
HP + ++ + D S++ +++ ++E + + H K IT L+++ ++ ++ D
Sbjct: 313 HPINESMFTLACYDGSLKHFDLLQNLNEPILTIPYAHDKCITSLSYNPVGHIFATAAKDR 372
Query: 913 QLCVWS 918
+ W+
Sbjct: 373 TIRFWT 378
Score = 43 (20.2 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 14/54 (25%), Positives = 23/54 (42%)
Query: 579 AAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+A D +K WD S ++SI R + K L+A+S D ++
Sbjct: 236 SASKDNLVKLWDPRSGNCISSILKFKHTVLKTRFQPTKGNLLMAIS-KDKSCRV 288
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 362 LLVGTNVGDIGLWEVGS 378
L+V T G+ LW S
Sbjct: 108 LVVATYSGEFSLWNASS 124
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 137 (53.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 35/115 (30%), Positives = 59/115 (51%)
Query: 412 NRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVI 471
N V ++P+G+ A S H V+I+ +++ QH ++ H GGVN ++F HP+ +I
Sbjct: 190 NFVDFNPNGTCIASAGSDHTVKIWDIRV-NKLLQHYQV--HSGGVNCVSF-HPSGNY-II 244
Query: 472 TCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T D T+K+ D G Y +GH PV++V + + S D ++ W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS--FSKGGELFSSGGADTQVLLW 297
Score = 98 (39.6 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V V +S DG A +++++ + R + H V FS P+ +L +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWNMY---RQRFLYSLYRHTHWVRCAKFS-PDGRL-I 159
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++C +DKTIK+WD TN KQ + ++ ++ N I S D +K W
Sbjct: 160 VSCSEDKTIKIWDTTN--KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H + + FS KQL T D + +W+ A+ + + GH+ V SV N+
Sbjct: 17 HKAAITSVDFSPSGKQLA--TASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNL 74
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFD 571
+ S + D ++ W+ D G +++A ++ +SADG +S+ V ++
Sbjct: 75 --LASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV--WN 130
Query: 572 TTKNRFL 578
+ RFL
Sbjct: 131 MYRQRFL 137
Score = 81 (33.6 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N II D +++I ++ + L+GH+ + ++FS + S GAD+Q+
Sbjct: 237 HPSGNYIITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVL 295
Query: 916 VWSSD 920
+W ++
Sbjct: 296 LWRTN 300
>DICTYBASE|DDB_G0282623 [details] [associations]
symbol:wdr3 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0282623 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 KO:K14556 OMA:SIFAHDD HSSP:Q02793 RefSeq:XP_640160.1
ProteinModelPortal:Q54S79 STRING:Q54S79 EnsemblProtists:DDB0233973
GeneID:8623698 KEGG:ddi:DDB_G0282623 ProtClustDB:CLSZ2430470
Uniprot:Q54S79
Length = 942
Score = 102 (41.0 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 389 VWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLE 448
+WDL + Q+ +D V V S DG+L YS ++I+S D Q +
Sbjct: 41 IWDLRKQVLN-QSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIWSM--SDYQLQAV- 96
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
+ H G V + F+ L ++ D + VWD + + GH + SV +
Sbjct: 97 FNGHRGSVTTMTFNRLGNIL--VSGSKDTEVIVWDIITESGLFRLRGHRDQITSVKLLER 154
Query: 509 ENIQFIFSTALDGKIKAW 526
N + +++ DG IK W
Sbjct: 155 SN--HLITSSKDGFIKIW 170
Score = 84 (34.6 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 40/204 (19%), Positives = 77/204 (37%)
Query: 813 ALSKNDSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSI 872
+LS ND ++S S + ++N P + ++I +G +I
Sbjct: 403 SLSSNDQMLVSTSSESVKVWNMKSLSCIRSIACDYGLCTVFA--PGNLHVI-VGTKTGTI 459
Query: 873 QIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSD---GWEKQKNRF 929
+++ + + +K H + L + L + S GAD + W + E K++
Sbjct: 460 EVFELASAARVASIKAHEGSVWSLVLTPDLRGVTSGGADKLVKFWDFELIASQENSKHKV 519
Query: 930 LQIPTGRTPTAQSDTRVQFHQDQIHFLVVH--ETQLAIFETTKLECVKQWVPRES-SAPI 986
L + +T +SD + FL V + + IF T + VK + P+
Sbjct: 520 LNLSLTKTLKVESDVLALKYSADNKFLAVSLLDNTVKIFYT---DTVKFHLSLYGHKLPV 576
Query: 987 THATFSCDSQLVYACFLDATVCVF 1010
S DS L+ D + ++
Sbjct: 577 MCLDISDDSTLIITGSADKNIKIW 600
Score = 77 (32.2 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
DN +A+ + D++++I+ + L GH + L S ++++ AD + +W
Sbjct: 542 DNKFLAVSLLDNTVKIFYTDTVKFHLSLYGHKLPVMCLDISDDSTLIITGSADKNIKIWG 601
Query: 919 SDGWEKQKNRF 929
D + K+ F
Sbjct: 602 LDYGDCHKSFF 612
Score = 69 (29.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 14/65 (21%), Positives = 31/65 (47%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D+ +I G D +I+I+ + + H I ++F + + +S+ D ++ W
Sbjct: 584 DSTLIITGSADKNIKIWGLDYGDCHKSFFAHDDSIMQVSFIPSTHHFISASKDKRIKYWD 643
Query: 919 SDGWE 923
+D +E
Sbjct: 644 ADKFE 648
Score = 60 (26.2 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 548 AYSADGTRTYQGFRK--RSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGG 605
A+ T G R RSL + ++ ++ L + S+K W+M S+ + SI D G
Sbjct: 383 AFEVSSTLDQAGHRSDIRSLSL----SSNDQMLVSTSSESVKVWNMKSLSCIRSIACDYG 438
Query: 606 L 606
L
Sbjct: 439 L 439
Score = 45 (20.9 bits), Expect = 0.00054, Sum P(3) = 0.00054
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 691 GMNGDVRSLA--DVKPRITEESNDKSKVWKLTELS 723
G D+RSL+ + S++ KVW + LS
Sbjct: 394 GHRSDIRSLSLSSNDQMLVSTSSESVKVWNMKSLS 428
Score = 37 (18.1 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 718 KLTELSEPNQCRSLRLPENLR 738
+L + NQ R R+P N R
Sbjct: 199 RLCSCTSDNQIRFWRIPSNER 219
>UNIPROTKB|Q9GZS3 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IDA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IDA] [GO:0055087 "Ski complex"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 EMBL:CH471136 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:AF309553 EMBL:AF100786 EMBL:AF127799
EMBL:AK024754 EMBL:CR457333 EMBL:BC010080 IPI:IPI00019269
RefSeq:NP_079510.1 UniGene:Hs.513055 PDB:3OW8 PDBsum:3OW8
ProteinModelPortal:Q9GZS3 SMR:Q9GZS3 DIP:DIP-36672N IntAct:Q9GZS3
MINT:MINT-1376321 STRING:Q9GZS3 PhosphoSite:Q9GZS3 DMDM:74761365
PaxDb:Q9GZS3 PeptideAtlas:Q9GZS3 PRIDE:Q9GZS3 DNASU:80349
Ensembl:ENST00000267973 Ensembl:ENST00000558311 GeneID:80349
KEGG:hsa:80349 UCSC:uc002bdn.3 GeneCards:GC15M078575
HGNC:HGNC:30300 HPA:HPA039932 HPA:HPA040065 MIM:609540
neXtProt:NX_Q9GZS3 PharmGKB:PA142670595 InParanoid:Q9GZS3
PhylomeDB:Q9GZS3 ChiTaRS:WDR61 EvolutionaryTrace:Q9GZS3
GenomeRNAi:80349 NextBio:70956 Bgee:Q9GZS3 CleanEx:HS_WDR61
Genevestigator:Q9GZS3 GermOnline:ENSG00000140395 Uniprot:Q9GZS3
Length = 305
Score = 90 (36.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I+IY+V+ + L GH+ + +AF VSS +D + VW
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 81 (33.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 451 AHVGGVNDIAFSHPNKQLC--VITCGDDKTIKVWDATNGAK--QYIFEGHEAPVYSVCPH 506
AH + +A+ K+ V+T D +KVW + Q+ EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDIS 73
Query: 507 HKENIQFIFSTALDGKIKAWLYDNLGSRV---DYEAPGRWCTTMAYSADGTRTYQGFRKR 563
H + S++LD I+ W +N G ++ D W T+A+S D G
Sbjct: 74 H--TLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAW--TLAFSPDSQYLATGTHVG 128
Query: 564 SLGVVQFDTTKNRF 577
+ + ++ K +
Sbjct: 129 KVNIFGVESGKKEY 142
Score = 78 (32.5 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV D + +AA D I+ WD+++ + + SIDA G + A + F+ D LA
Sbjct: 65 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWT-LAFSPDSQYLA 122
Query: 623 VSTNDNGIKILATSDG 638
T+ + I G
Sbjct: 123 TGTHVGKVNIFGVESG 138
Score = 53 (23.7 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 494 EGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYE 538
+ H+ ++SV + KEN + + + +LD +K W + + R+D +
Sbjct: 13 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRD--ERLDLQ 57
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 111 (44.1 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 32/111 (28%), Positives = 50/111 (45%)
Query: 444 RQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV 503
+ H + H V D+ SH + ++ D T+++WD T G +F+GH V SV
Sbjct: 61 KAHRSLKGHSHFVQDVVISHDGQ--FALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSV 118
Query: 504 CPHHKENIQFIFSTALDGKIKAWLYDNLGS-RVDYEAPGR---WCTTMAYS 550
+N Q I S + D IK W + LG + E P W + + +S
Sbjct: 119 A-FSSDNRQII-SGSRDATIKVW--NTLGECKFTLEGPEAHQDWVSCIRFS 165
Score = 69 (29.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 35/169 (20%), Positives = 75/169 (44%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P I++ G D+ ++I++++ + L H+ + + S ++ S G D+ C+
Sbjct: 166 PNTPTIVS-GSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACL 224
Query: 917 WS-SDGWEKQK-------NRFLQIPTGRTPTAQSDTRV---QFHQDQIHFLVVHETQLAI 965
W S G K N P +A +D ++ Q+ +V E +
Sbjct: 225 WELSSGKPLYKLEARNTINALAFSPNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQA 284
Query: 966 FETTKLECVKQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAAN 1014
F++ K K+ P+ + A ++ A +S D ++YA + D + V+ +++
Sbjct: 285 FDSKKK---KESKPK-APACLSLA-WSADGSVLYAGYNDGLIRVYKSSS 328
>DICTYBASE|DDB_G0278733 [details] [associations]
symbol:aip1 "actin-interacting protein 1"
species:44689 "Dictyostelium discoideum" [GO:0030863 "cortical
cytoskeleton" evidence=IDA] [GO:0051015 "actin filament binding"
evidence=IDA] [GO:0043327 "chemotaxis to cAMP" evidence=IGI]
[GO:0030041 "actin filament polymerization" evidence=IGI]
[GO:0030010 "establishment of cell polarity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0060187 "cell pole" evidence=IDA]
[GO:0042641 "actomyosin" evidence=IDA] [GO:0030864 "cortical actin
cytoskeleton" evidence=IDA] [GO:0030042 "actin filament
depolymerization" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006935 "chemotaxis" evidence=IMP] [GO:0006909
"phagocytosis" evidence=IMP] [GO:0006907 "pinocytosis"
evidence=IMP] [GO:0001891 "phagocytic cup" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0278733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GenomeReviews:CM000152_GR
GO:GO:0008283 eggNOG:COG2319 GO:GO:0006909 GO:GO:0006935
GO:GO:0030042 EMBL:AAFI02000024 GO:GO:0001891 GO:GO:0030864
GO:GO:0006907 GO:GO:0060187 EMBL:U36936 RefSeq:XP_642008.1
ProteinModelPortal:P54686 STRING:P54686 EnsemblProtists:DDB0214916
GeneID:8621739 KEGG:ddi:DDB_G0278733 OMA:INGIAAW
ProtClustDB:CLSZ2430741 Uniprot:P54686
Length = 597
Score = 95 (38.5 bits), Expect = 2.0e-05, Sum P(5) = 2.0e-05
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
VN V +SPDG+ + +Y G+++ + H GG+ ++S N + V
Sbjct: 194 VNCVRFSPDGNKLVTVGADKKAFVYDGKTGEKLIELNPAQQHTGGIYGCSWSADNNR--V 251
Query: 471 ITCGDDKTIKVWDATNG 487
+T DK+ K+WD T G
Sbjct: 252 LTASADKSCKIWDTTTG 268
Score = 67 (28.6 bits), Expect = 2.0e-05, Sum P(5) = 2.0e-05
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSK-LKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
+A G + + +++ + E KSK H+ RI +A+S+ + S+ DSQ+ +W+
Sbjct: 497 LASGCSNREVIVWSGK--EAKSKGWVNHTARINAVAWSNDSKFVASASLDSQIYIWN 551
Score = 64 (27.6 bits), Expect = 5.8e-05, Sum P(5) = 5.8e-05
Identities = 17/67 (25%), Positives = 33/67 (49%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSK--LKGHSKRITGLAFSHALNVLVSSGADSQLCVWS-- 918
+++G D+ I ++ + + + + L H IT L++S L S ++ ++ VWS
Sbjct: 453 VSVGGKDNKIHVFTLSGNNLTASHTLDNHRGAITDLSYSPCGKYLASGCSNREVIVWSGK 512
Query: 919 ---SDGW 922
S GW
Sbjct: 513 EAKSKGW 519
Score = 62 (26.9 bits), Expect = 2.0e-05, Sum P(5) = 2.0e-05
Identities = 23/86 (26%), Positives = 35/86 (40%)
Query: 551 ADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASP 610
A +R +G K +G + FD +A D S+ WD+ S L T+
Sbjct: 312 AKPSRVIKGHNKL-VGTIAFDKNAGSLYSASYDASLLQWDL-STGLATNFTGPAHKNQIT 369
Query: 611 RIRFNKDGCLLAVSTNDNGIKILATS 636
I+ N D L D+ +KI + S
Sbjct: 370 SIKINGDQ--LITCAMDDSVKISSIS 393
Score = 48 (22.0 bits), Expect = 2.0e-05, Sum P(5) = 2.0e-05
Identities = 15/69 (21%), Positives = 31/69 (44%)
Query: 750 SGNAILALASNAIHLLWKWQRTERNSSGKATASVAPQLWQPPSGIMMTNDVTDSNPEEAV 809
SG+ ++A++ I+++ GK + A W+P S + +V+ + +
Sbjct: 413 SGDVVVAVSMKTIYVI---------KGGKIVSQTAAT-WEPTSVAINDTEVSVGGKDNKI 462
Query: 810 PCFALSKND 818
F LS N+
Sbjct: 463 HVFTLSGNN 471
Score = 46 (21.3 bits), Expect = 5.8e-05, Sum P(5) = 5.8e-05
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 975 KQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAAN 1014
K WV +A I +S DS+ V + LD+ + +++ N
Sbjct: 517 KGWV--NHTARINAVAWSNDSKFVASASLDSQIYIWNVEN 554
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(5) = 2.0e-05
Identities = 13/54 (24%), Positives = 24/54 (44%)
Query: 348 SPMSMDF---HPVQQTL---------LLVGTNVGDIGLWEVGSRERLVLRNFKV 389
+PM D HP Q T+ + G G++ +W+ +E ++ +KV
Sbjct: 47 NPMVADIYYEHPCQTTVAKYAPSGNYIASGDVQGNLRIWDTLQKEHILKATYKV 100
Score = 38 (18.4 bits), Expect = 5.8e-05, Sum P(5) = 5.8e-05
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 180 NPDIKTLFVDHTCGQPNGARAPS 202
NP + ++ +H C APS
Sbjct: 47 NPMVADIYYEHPCQTTVAKYAPS 69
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 44/158 (27%), Positives = 72/158 (45%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
+ K+WD S G + N V +SP+G+ A S H V+I+ + +
Sbjct: 166 KTIKIWD--TTSKQCVNNFSDSVGFA-NFVDFSPNGTCIASAGSDHAVRIWDIRM-NRLL 221
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC 504
QH ++ H GVN ++F HP+ ++T D T+K+ D G Y +GH PV++V
Sbjct: 222 QHYQV--HSCGVNCLSF-HPSGN-SLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVS 277
Query: 505 PHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGR 542
K+ F S D ++ W ++V Y P +
Sbjct: 278 -FSKDGELFT-SGGADAQVLVWRTSF--NQVHYRDPSK 311
Score = 91 (37.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 32/128 (25%), Positives = 57/128 (44%)
Query: 452 HVGGVNDIAFSHPN-KQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN 510
H + FS PN KQ+ T D + +W A+ Y + GH+ V S+ + N
Sbjct: 17 HKAAITSADFS-PNCKQIA--TASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFSPQGN 73
Query: 511 IQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQF 570
+ + S + D ++ W+ D G +++A ++ +SADG +S+ V +
Sbjct: 74 L--LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDKSIKV--W 129
Query: 571 DTTKNRFL 578
+ RFL
Sbjct: 130 SMYRQRFL 137
Score = 90 (36.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 30/116 (25%), Positives = 52/116 (44%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V V +S DG A ++++S + R + H V FS P+ +L +
Sbjct: 105 VRSVDFSADGQFLVTASEDKSIKVWSMY---RQRFLYSLYRHTHWVRCAKFS-PDGRL-I 159
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++C +DKTIK+WD T+ KQ + ++ ++ N I S D ++ W
Sbjct: 160 VSCSEDKTIKIWDTTS--KQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIW 213
Score = 90 (36.7 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 33/126 (26%), Positives = 52/126 (41%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H V + FS P L + + DKT+++W K F+ H APV SV +
Sbjct: 59 HKDVVTSLQFS-PQGNL-LASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSV--DFSADG 114
Query: 512 QFIFSTALDGKIKAW-LYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQF 570
QF+ + + D IK W +Y Y W +S DG +++ + +
Sbjct: 115 QFLVTASEDKSIKVWSMYRQRFLYSLYRHT-HWVRCAKFSPDGRLIVSCSEDKTIKI--W 171
Query: 571 DTTKNR 576
DTT +
Sbjct: 172 DTTSKQ 177
Score = 83 (34.3 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/62 (27%), Positives = 34/62 (54%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N+++ D +++I ++ + L+GH+ + ++FS + S GAD+Q+
Sbjct: 237 HPSGNSLVTAS-SDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVL 295
Query: 916 VW 917
VW
Sbjct: 296 VW 297
>UNIPROTKB|Q32LN7 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9913
"Bos taurus" [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:2001162 "positive regulation of histone H3-K79 methylation"
evidence=ISS] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=ISS] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0016055 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0080182
GO:GO:0016593 GO:GO:0045638 GO:GO:2001162
GeneTree:ENSGT00700000104507 GO:GO:0055087 EMBL:BC109495
IPI:IPI00695868 RefSeq:NP_001033186.1 UniGene:Bt.20040
ProteinModelPortal:Q32LN7 PRIDE:Q32LN7 Ensembl:ENSBTAT00000021203
GeneID:513208 KEGG:bta:513208 CTD:80349 HOGENOM:HOG000036765
HOVERGEN:HBG059813 InParanoid:Q32LN7 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW NextBio:20870747 Uniprot:Q32LN7
Length = 305
Score = 90 (36.7 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I+IY+V+ + L GH+ + +AF VSS +D + VW
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 82 (33.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 33/134 (24%), Positives = 56/134 (41%)
Query: 451 AHVGGVNDIAFSHPNKQLC--VITCGDDKTIKVWDATNGAK--QYIFEGHEAPVYSVCPH 506
AH + +A+ K+ V+T D +KVW + Q+ EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVWKWRDEKLDLQWSLEGHQLGVVSVDIS 73
Query: 507 HKENIQFIFSTALDGKIKAWLYDNLGSRV---DYEAPGRWCTTMAYSADGTRTYQGFRKR 563
H + S++LD I+ W +N G ++ D W T+A+S D G
Sbjct: 74 H--TLPIAASSSLDAHIRLWDLEN-GKQIKSIDAGPVDAW--TLAFSPDSQYLATGTHVG 128
Query: 564 SLGVVQFDTTKNRF 577
+ + ++ K +
Sbjct: 129 KVNIFGVESGKKEY 142
Score = 78 (32.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV D + +AA D I+ WD+++ + + SIDA G + A + F+ D LA
Sbjct: 65 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWT-LAFSPDSQYLA 122
Query: 623 VSTNDNGIKILATSDG 638
T+ + I G
Sbjct: 123 TGTHVGKVNIFGVESG 138
Score = 52 (23.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 494 EGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAW 526
+ H+ ++SV + KEN + + + +LD +K W
Sbjct: 13 QAHDDAIWSVAWGSNKKENSETVVTGSLDDLVKVW 47
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 92 (37.4 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 43/189 (22%), Positives = 86/189 (45%)
Query: 15 LLEQESGFFF---NMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSM-KIFFEIRKQKYL 70
LL QESG + F + V G WD E L+ + + ++ ++ F + +QKYL
Sbjct: 74 LLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNELKALMHSPNAIVRMKFLLLQQKYL 133
Query: 71 EALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKY-GDTKSARS 129
E L+ +A+++L +L +N + ++ L + + + +++ G +R
Sbjct: 134 EYLEDGKVLEALQVLRGELTPLK-YNTDRIHVLSGYLMCSHAEDLKAKAEWEGKGAGSRC 192
Query: 130 IMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLC--KNPRPNP--DIKT 185
+L +L+ + + + L RL+TL+ Q++ Q C N + + D +
Sbjct: 193 RLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLYHNTKLDSSLDSVS 243
Query: 186 LFVDHTCGQ 194
L +DH C +
Sbjct: 244 LLLDHVCSR 252
Score = 83 (34.3 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 30/96 (31%), Positives = 48/96 (50%)
Query: 857 PQDNNIIAIGMDD-SSIQIYNVRVDEVKSKL-KGHSKRITGLAFSHALNVLVSSGADSQL 914
P D +IA G DD S + ++NV+ E+++K+ + H +T +A++ V+ G Q
Sbjct: 323 PDDVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 382
Query: 915 CVWSSDG-----WEKQKNRFLQ-IPTGRTPTAQSDT 944
DG WE + + L + GRT A SDT
Sbjct: 383 YQCDLDGNLLESWEGVRVQCLWCMGDGRTVLA-SDT 417
Score = 56 (24.8 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 613 RFNKDGCLLAVSTNDNGI---KILATSDGIRLLRTFENLAYDAS 653
+F+ DG LA + D + ++ + ++LLRT E AY S
Sbjct: 274 KFSNDGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVS 317
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 113 (44.8 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 61/283 (21%), Positives = 111/283 (39%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGG----DEV 443
++WD C +K V V WSPDG + + ++++ G D +
Sbjct: 169 RIWD---CDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDAL 225
Query: 444 RQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV 503
R H + + I P + + + D TIK+WD + QY GH V V
Sbjct: 226 RGHSKWITSLSW-EPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCV 284
Query: 504 CPHHKENIQ-FIFSTALDGKIKAWLYDNLGSRVDY-EAPGRWCTTMAYSAD-----GTRT 556
K Q ++S + D ++ W ++ G ++ ++ W ++ S D G
Sbjct: 285 ----KWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFD 340
Query: 557 YQGFR--------KRSLGVVQFDTTKN-----RFLAAGDDFSIKFWDMDSVQLLTSIDA- 602
+ G + K++L + KN + A DD+++ W+ ++ I
Sbjct: 341 HTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWN--PLKSTKPIARM 398
Query: 603 DGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRTF 645
G + F+ DG + ++ DN IK+ DG + + TF
Sbjct: 399 TGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDG-KFISTF 440
Score = 72 (30.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D I D+SI++++ R + S +GH + +A+S +LVS D+ L VW
Sbjct: 413 DGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVW 471
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 121 (47.7 bits), Expect = 0.00073, P = 0.00073
Identities = 68/271 (25%), Positives = 112/271 (41%)
Query: 411 VNRVIWSPDGSLFGV-AYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
+ V ++ GS F +Y R +I+ G+E+ H ++ H V IAF++P
Sbjct: 95 LTNVAFNKSGSCFITGSYDR-TCKIWDTASGEEL--HT-LEGHRNVVYAIAFNNPYGDK- 149
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYD 529
V T DKT K+W A G Y F GH A + VC + + ++D K W +
Sbjct: 150 VATGSFDKTCKLWSAETGKCFYTFRGHTAEI--VCLAFNPQSTLVATGSMDTTAKLWDVE 207
Query: 530 NLGSRVDYEAPGRWCT--TMAYSADGTRTYQGFRKRSLGVVQFDTTKNR---FLAA--GD 582
+ G V A G + ++ ++ G R G + + +D R L+ G+
Sbjct: 208 S-GEEVSTLA-GHFAEIISLCFNTTGDRLVTGSFDHT--AILWDVPSGRKVHVLSGHRGE 263
Query: 583 DFSIKF-WDMDSV---QLLTSI---DADGGLPASPRIRFNKDGCLLAVSTNDNGIKILAT 635
++F WD + L S DA+GG + + N + +L V N G +++AT
Sbjct: 264 ISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDE--VLDVCFNYTG-QLIAT 320
Query: 636 SDGIRLLRTFENLAYDASRTSENSKPTISPI 666
+ R F + E K IS +
Sbjct: 321 ASADGTSRVFSTDTFQCLCQLEGHKGEISKV 351
Score = 101 (40.6 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 24/88 (27%), Positives = 45/88 (51%)
Query: 441 DEVRQHL--EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
DE + +L + AH+ + ++AF+ C IT D+T K+WD +G + + EGH
Sbjct: 78 DERKFYLFRALQAHILPLTNVAFNKSGS--CFITGSYDRTCKIWDTASGEELHTLEGHRN 135
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAW 526
VY++ ++ + + + + D K W
Sbjct: 136 VVYAIAFNNPYGDK-VATGSFDKTCKLW 162
Score = 82 (33.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 34/167 (20%), Positives = 67/167 (40%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
+PQ + ++A G D++ ++++V E S L GH I L F+ + LV+ D
Sbjct: 186 NPQ-STLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAI 244
Query: 916 VWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQD-QIHFLVVHETQLAIFETTKLECV 974
+W + R + + +G VQF+ D + + +++ +C+
Sbjct: 245 LW-----DVPSGRKVHVLSGHRGEISC---VQFNWDCSLIATASLDKSCKVWDAEGGQCL 296
Query: 975 KQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRI 1021
+ + F+ QL+ D T VFS + C++
Sbjct: 297 ATLLGHNDE--VLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQL 341
Score = 68 (29.0 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 27/142 (19%), Positives = 57/142 (40%)
Query: 779 ATASV--APQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG-GKISLFNXX 835
ATAS+ + ++W G + + N E CF + + +AS G +F+
Sbjct: 277 ATASLDKSCKVWDAEGGQCLAT-LLGHNDEVLDVCF--NYTGQLIATASADGTSRVFSTD 333
Query: 836 XXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITG 895
+ Q + ++ +D +S +++ V+ L+GHS I
Sbjct: 334 TFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTS-RVWCVKTGACLQVLEGHSDEIFS 392
Query: 896 LAFSHALNVLVSSGADSQLCVW 917
AF++ + +++ D+ +W
Sbjct: 393 CAFNYEGDTIITGSKDNTCRIW 414
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 126 (49.4 bits), Expect = 0.00024, P = 0.00024
Identities = 33/115 (28%), Positives = 57/115 (49%)
Query: 412 NRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVI 471
N V ++P G+ A S V+++ +++ QH ++ H GGVN I+F HP+ ++
Sbjct: 190 NFVDFNPSGTCIASAGSDQTVKVWDVRV-NKLLQHYQV--HSGGVNCISF-HPSDNY-LV 244
Query: 472 TCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T D T+K+ D G Y +GH PV++V + + S D ++ W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS--FSKGGELFASGGADTQVLLW 297
Score = 97 (39.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V V +S DG A ++++S + R + H V FS P+ +L +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMY---RQRFLYSLYRHTHWVRCAKFS-PDGRL-I 159
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++C +DKTIK+WD TN KQ + ++ ++ + I S D +K W
Sbjct: 160 VSCSEDKTIKIWDTTN--KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 89 (36.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 39/180 (21%), Positives = 72/180 (40%)
Query: 398 PLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVN 457
P+ K ++ + SP+G A + ++++ R + + H V
Sbjct: 8 PVLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFK--PHARAYRYV-GHKDVVT 64
Query: 458 DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFST 517
+ FS P+ L + + D+T+++W K F+ H APV SV + QF+ +
Sbjct: 65 SVQFS-PHGNL-LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSV--DFSADGQFLATA 120
Query: 518 ALDGKIKAW-LYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNR 576
+ D IK W +Y Y W +S DG +++ + +DTT +
Sbjct: 121 SEDKSIKVWSMYRQRFLYSLYRHT-HWVRCAKFSPDGRLIVSCSEDKTIKI--WDTTNKQ 177
Score = 87 (35.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 17/65 (26%), Positives = 36/65 (55%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP DN ++ D +++I ++ + L+GH+ + ++FS + S GAD+Q+
Sbjct: 237 HPSDNYLVTAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 916 VWSSD 920
+W ++
Sbjct: 296 LWRTN 300
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 85 (35.0 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 25/76 (32%), Positives = 34/76 (44%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY-IFEGHEAPVYSVCPHHKEN 510
H GV+ I P +++C D IK+W+ N + F GH V VC +
Sbjct: 286 HTKGVSAIRL-FPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVC-FNNSG 343
Query: 511 IQFIFSTALDGKIKAW 526
QF+ S A D IK W
Sbjct: 344 TQFL-SAAYDRYIKLW 358
Score = 80 (33.2 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 24/82 (29%), Positives = 37/82 (45%)
Query: 563 RSLGVVQ---FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGC 619
R LG V F RF++ DD S++ W+ D I A+ + + P + + +G
Sbjct: 415 RHLGAVNTITFVDENRRFVSTSDDKSLRVWEWDIPADFKYI-AEPSMHSMPAVTLSPNGK 473
Query: 620 LLAVSTNDNGIKILATSDGIRL 641
LA + DN I I + RL
Sbjct: 474 WLACQSMDNQILIFGAQNRFRL 495
Score = 66 (28.3 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKR-ITGLAFSHALNVLVSSGADSQLCVW 917
D + + G D + I++ + ++ ++K H K I+ L H + +++ G D Q+ +W
Sbjct: 518 DMSYVVSGDADGKLNIWDWKTTKLYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLW 577
>FB|FBgn0039705 [details] [associations]
symbol:Atg16 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0010506 "regulation of
autophagy" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00700000104505
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE HSSP:Q04724 UniGene:Dm.20800 GeneID:326115
KEGG:dme:Dmel_CG31033 FlyBase:FBgn0039705 GenomeRNAi:326115
NextBio:847128 EMBL:BT024267 RefSeq:NP_733313.2 SMR:Q86BR6
IntAct:Q86BR6 MINT:MINT-293011 STRING:Q86BR6
EnsemblMetazoa:FBtr0085528 UCSC:CG31033-RC InParanoid:Q86BR6
Uniprot:Q86BR6
Length = 604
Score = 80 (33.2 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
IA G D +I I+NV +++ LKGHS + +++S N+L S G + + ++S
Sbjct: 548 IACGSADGAIYIWNVN-GFLEATLKGHSTAVNAVSWSPNNNMLASVGKNKRCTIYS 602
Score = 78 (32.5 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 25/100 (25%), Positives = 49/100 (49%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGS-LFGVAYSRHIVQIYSYHGGDEV 443
R K+WD+G S +A L +N V + G+ + G + + + ++++ D
Sbjct: 340 RKVKLWDIGKNSTEPRAVL-SGSSAGINSVDFDSTGAYILGTS-NDYGARVWTVM--DNR 395
Query: 444 RQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD 483
+H + H G V +A + + + V+T D+T+K+WD
Sbjct: 396 LRHT-LTGHSGKV--MAAKYVQEPIKVVTGSHDRTLKIWD 432
Score = 66 (28.3 bits), Expect = 0.00041, Sum P(4) = 0.00041
Identities = 30/126 (23%), Positives = 56/126 (44%)
Query: 447 LEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAK-QYIFEGHEAPVYSVC 504
++ +AH + + +S P +++ V T G D+ +K+WD N + + + G A + SV
Sbjct: 312 MKFEAHENESHAVRWS-PVERM-VATGGADRKVKLWDIGKNSTEPRAVLSGSSAGINSV- 368
Query: 505 PHHKENIQFIFSTALDGKIKAW-LYDNLGSRVDYEAPGRWCTTMA--YSADGTRTYQGFR 561
+I T+ D + W + DN R+ + G MA Y + + G
Sbjct: 369 -DFDSTGAYILGTSNDYGARVWTVMDN---RLRHTLTGHSGKVMAAKYVQEPIKVVTGSH 424
Query: 562 KRSLGV 567
R+L +
Sbjct: 425 DRTLKI 430
Score = 65 (27.9 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 29/99 (29%), Positives = 46/99 (46%)
Query: 567 VVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGL-PAS-PRIRFNKDGCLLAVS 624
+V D+ + ++ D I+FWD + T AD L PA + +KD L S
Sbjct: 451 LVTTDSLGSTIISGHYDKKIRFWD-----IRTEKQADDVLMPAKITSLDLSKDCNYLICS 505
Query: 625 TNDNGIKILATSDGIRLLRTFEN----LAYDASRTSENS 659
D+ IK+L +++ TF N ++ D +R S NS
Sbjct: 506 VRDDTIKLLDLRKN-QVISTFTNEHFKISCDFARASFNS 543
Score = 49 (22.3 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 30/124 (24%), Positives = 58/124 (46%)
Query: 65 RKQ--KYLEALDKHDRA--KAVEILVKDLKVFSTFNEELFKEITQ--------LLTLEN- 111
RK+ + E +++++R ++ +LK+ S NE+L ++ + TLE
Sbjct: 21 RKECDNFKEIIEQNNRLIDHVAQLKADNLKI-SVENEQLRNAVSTGGTGSNVAIATLEKK 79
Query: 112 -FRENEQLSKYGDTKSARSIMLVELKKLIEANPLF-RDK---LQFPNLKNSRLRT---LI 163
+ E+L++ K S M+V+L + +E + +K L N+RLR L+
Sbjct: 80 LLSQQEELTELHKRKGENSQMIVDLNQKVEQQRIIISEKEHSLVEQQTNNNRLRAEVQLL 139
Query: 164 NQSL 167
+ SL
Sbjct: 140 HSSL 143
>MGI|MGI:1337100 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10090 "Mus
musculus" [GO:0003779 "actin binding" evidence=ISA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=ISA] [GO:0015629
"actin cytoskeleton" evidence=ISA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1337100 GO:GO:0005737
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007605 HOVERGEN:HBG000780 CTD:9948
OrthoDB:EOG4WH8KB OMA:LKDQKKC ChiTaRS:WDR1 EMBL:AF020055
IPI:IPI00314748 RefSeq:NP_035845.1 UniGene:Mm.2654
UniGene:Mm.406120 ProteinModelPortal:O88342 SMR:O88342
STRING:O88342 PhosphoSite:O88342 REPRODUCTION-2DPAGE:IPI00314748
REPRODUCTION-2DPAGE:O88342 UCD-2DPAGE:O88342 PaxDb:O88342
PRIDE:O88342 Ensembl:ENSMUST00000005234 GeneID:22388 KEGG:mmu:22388
InParanoid:O88342 NextBio:302759 Bgee:O88342 CleanEx:MM_WDR1
Genevestigator:O88342 GermOnline:ENSMUSG00000005103 Uniprot:O88342
Length = 606
Score = 103 (41.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
VN V +SPDG+ F A + + IY G++V E AH GG+ I++S + L
Sbjct: 192 VNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHL-- 249
Query: 471 ITCGDDKTIKVWD 483
++ DKT K+WD
Sbjct: 250 LSASGDKTSKIWD 262
Score = 70 (29.7 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKS--KLKGHSKRITGLAFSHALNVLVSSGADSQ 913
HP + +A+G D ++++Y++ +K KL +T +A+SH L A
Sbjct: 454 HP-GGDTVAVGGTDGNVRVYSILASTLKDEGKLLEAKGPVTDVAYSHDGAFLAVCDASKV 512
Query: 914 LCVWS-SDGWEKQKNRF 929
+ V+S +DG+ + N F
Sbjct: 513 VTVFSVADGYS-ENNVF 528
Score = 57 (25.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 479 IKVWDATNGAKQY-IFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
I D N +K + +GH + + H +I+S + DG I W
Sbjct: 301 INYLDKNNPSKPLRVIKGHSKSIQCLTVHRNGGKSYIYSGSHDGHINYW 349
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 117 (46.2 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 38/140 (27%), Positives = 58/140 (41%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
I H+G V +AF N+ C T D+TIK+WD G + GH V + ++
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFC--TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 509 ENIQFIFSTALDGKIKAW-LYDNLGSRVDY-EAPGRWCTTMAYSADGTRTYQGFRKRSLG 566
++FS D ++K W L N R + G +C + + D T G R
Sbjct: 230 HT--YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLT--GGRDSVCR 285
Query: 567 VVQFDTTKNRFLAAGDDFSI 586
V T F +G D ++
Sbjct: 286 VWDIRTKMQIFALSGHDNTV 305
Score = 66 (28.3 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADS 912
P D ++ G D++I+ +++R + S L H K + + N S+ AD+
Sbjct: 312 PTDPQVVT-GSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADN 366
>UNIPROTKB|E1BSG1 [details] [associations]
symbol:BRWD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0005737 GO:GO:0007010
GO:GO:0005730 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360
InterPro:IPR019775 GO:GO:0006357 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00700000104382
InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AADN02010822
EMBL:AADN02010823 IPI:IPI00586943 Ensembl:ENSGALT00000025882
OMA:SRETNST Uniprot:E1BSG1
Length = 2293
Score = 116 (45.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 28/101 (27%), Positives = 50/101 (49%)
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
+V+I+S H G R + H ++D+A ++ N + +C DK I+VW A
Sbjct: 212 LVKIWSTHNG---RLFATLRGHSAEISDMAVNYENTMIAAGSC--DKMIRVWCLRTCAPV 266
Query: 491 YIFEGHEAPVYSV--CPHHKENIQFIFSTALDGKIKAWLYD 529
+ GH + S+ P K +++++ ST DG + W +D
Sbjct: 267 AVLHGHTGSITSLQFSPMVKGSLRYMVSTGADGNVCFWQWD 307
Score = 82 (33.9 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 24/100 (24%), Positives = 48/100 (48%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALN--VLVSSGADSQLC 915
QD+N + +++ ++++N ++ L GH+ + L +H + +++S+G D +
Sbjct: 439 QDDNYVVTAVNNHLLKVWNSSTGQLLHDLVGHADEVFVLE-THPFDSRIMLSAGHDGNIF 497
Query: 916 VWSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHF 955
+W K K+ F I G+ A D + F D HF
Sbjct: 498 IWDITKGTKTKHYFNMIE-GQGHGAVFDCK--FSPDGQHF 534
Score = 73 (30.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 28/140 (20%), Positives = 62/140 (44%)
Query: 739 ATKISRLIFTNSGNAILALASNAIHLLWKWQRTERNSSGKATASVAPQLWQPPSGIMMTN 798
A K+ + F+NSG+ ++ + + +W+++ E S ++ +L P G M ++
Sbjct: 371 ADKVDSIQFSNSGDRFISGSRDGTARIWRFEEAEWRS---ILLDMSDRL---P-GDMCSD 423
Query: 799 DVTDSNPEEAVPCFALSKNDSYVMSASGGKI-SLFNXXXXXXXXXXXXXXXXXXXXXXHP 857
+ P+ V A +++D+YV++A + ++N HP
Sbjct: 424 EDKFMRPK--VTMIAWNQDDNYVVTAVNNHLLKVWNSSTGQLLHDLVGHADEVFVLETHP 481
Query: 858 QDNNIIAIGMDDSSIQIYNV 877
D+ I+ D +I I+++
Sbjct: 482 FDSRIMLSAGHDGNIFIWDI 501
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 112 (44.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
+ H+G V +AF N+ C T D+TIK+WD G + GH V + ++
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFC--TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 509 ENIQFIFSTALDGKIKAW 526
++FS D ++K W
Sbjct: 224 HT--YMFSAGDDKQVKCW 239
Score = 70 (29.7 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADS 912
P D +I G DS+I+ +++R + + + H K + +A N VS+ AD+
Sbjct: 305 PTDPQVIT-GSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADN 359
>WB|WBGene00001679 [details] [associations]
symbol:gpb-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0040013 "negative
regulation of locomotion" evidence=IMP] [GO:0046662 "regulation of
oviposition" evidence=IMP] [GO:0005834 "heterotrimeric G-protein
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0009792 GO:GO:0000132
GO:GO:0035046 GO:GO:0018991 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0040013 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0004871
GO:GO:0046662 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356 OMA:CMLWDIE
InterPro:IPR016346 PIRSF:PIRSF002394 EMBL:X17497 EMBL:AF291846
EMBL:Z49127 PIR:S09591 PIR:T20830 RefSeq:NP_001254312.1
UniGene:Cel.6600 ProteinModelPortal:P17343 SMR:P17343 STRING:P17343
PaxDb:P17343 PRIDE:P17343 EnsemblMetazoa:F13D12.7a.1
EnsemblMetazoa:F13D12.7a.2 EnsemblMetazoa:F13D12.7a.3 GeneID:174803
KEGG:cel:CELE_F13D12.7 UCSC:F13D12.7.1 CTD:174803
WormBase:F13D12.7a InParanoid:P17343 KO:K07972 NextBio:885576
ArrayExpress:P17343 Uniprot:P17343
Length = 340
Score = 98 (39.6 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 30/112 (26%), Positives = 45/112 (40%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGD-EVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
++P GS +I IYS + VR E+ H G ++ F N+ ++T
Sbjct: 105 YAPSGSFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQ---IVTSS 161
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D T +WD G + F GH V S+ + + S A D K W
Sbjct: 162 GDMTCALWDIETGQQCTAFTGHTGDVMSLSL--SPDFRTFISGACDASAKLW 211
Score = 70 (29.7 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 18/62 (29%), Positives = 32/62 (51%)
Query: 861 NIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGL---AFSHALNVLVSSGADSQLCVW 917
N A G DD++ +++++R D+ + + H I G+ AFS + +L + D VW
Sbjct: 239 NAFATGSDDATCRLFDIRADQ-ELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVW 297
Query: 918 SS 919
S
Sbjct: 298 DS 299
Score = 64 (27.6 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 555 RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRF 614
+T+ G + + V F + N F DD + + +D+ + Q L D + + F
Sbjct: 220 QTFPG-HESDINAVAFFPSGNAFATGSDDATCRLFDIRADQELAMYSHDNIICGITSVAF 278
Query: 615 NKDGCLLAVSTND 627
+K G LL +D
Sbjct: 279 SKSGRLLFAGYDD 291
Score = 57 (25.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGA-DSQLCV 916
+ ++ G DD + +++ E L GH R++ L + + V +G+ DS L +
Sbjct: 280 KSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHDNRVSCLGVTED-GMAVCTGSWDSFLKI 338
Query: 917 WS 918
W+
Sbjct: 339 WN 340
>WB|WBGene00019434 [details] [associations]
symbol:nmtn-1 species:6239 "Caenorhabditis elegans"
[GO:0040002 "collagen and cuticulin-based cuticle development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0040002 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00550000074331
EMBL:FO080960 OMA:RVCAYPD RefSeq:NP_491864.2
ProteinModelPortal:H2KZG7 SMR:H2KZG7 IntAct:H2KZG7
EnsemblMetazoa:K06A5.8b.1 EnsemblMetazoa:K06A5.8b.2 GeneID:172355
KEGG:cel:CELE_K06A5.8 CTD:172355 WormBase:K06A5.8b Uniprot:H2KZG7
Length = 942
Score = 90 (36.7 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 27/121 (22%), Positives = 54/121 (44%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGD-EVRQHLEIDAHVGGVNDIAF--SHPNK 466
SV + ++P+G L + +++ +++ + +E+ H G V D+ F S N+
Sbjct: 682 SVYCLSFNPNGDLLATGSNDKTIRLMAFNEDSCRIGAEMELTCHDGTVRDLIFIESSINR 741
Query: 467 QLCVITCGDDKT-IKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKA 525
+++ G + V D G +GH AP+ + + QF+ S + D I+
Sbjct: 742 STILVSGGAGNCHLNVTDCNTGQLIQSMKGHTAPILGLYTWSQAGNQFV-SCSQDKTIRF 800
Query: 526 W 526
W
Sbjct: 801 W 801
Score = 82 (33.9 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 43/170 (25%), Positives = 72/170 (42%)
Query: 16 LEQESG-----FFFNMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIF-FEIRKQKY 69
LE+E+G F ++ + + +G WD+ ++ V N + F + I K K+
Sbjct: 51 LEREAGVINGAFSDDLLFLRQLILDGQWDNALDFVEPLKPV--NEFDFGAFRYNITKYKF 108
Query: 70 LEAL-------DKHDRAKAVEILV---KDLKVFSTFNEELFKEITQLLTLENFRENEQLS 119
E L HD AVE LV KDL+ E+ ++ + LLTL ++E
Sbjct: 109 FELLCVKLEPGPLHDNDFAVEELVECLKDLEHICPTPED-YRHLCALLTLPKLSDHEDFK 167
Query: 120 KYGDTKSARSIMLVELKKL----IEANPLFRDKLQFPNLKNSRLRTLINQ 165
+ + SAR ++ +L + +D+ N N RL LI +
Sbjct: 168 NWNPS-SARVECFNKVNQLCGHLLPPTGKEKDRGDDANSSNDRLTGLITK 216
Score = 64 (27.6 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 22/110 (20%), Positives = 48/110 (43%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
+ ++ G +D+S+ ++++ + + + H + + FS+A L+++ D ++ +
Sbjct: 833 NGKLLVSGHEDASVALFDIGGNRILQTFRPHGDEVRTVRFSNAAYYLLTASYDKRVVISD 892
Query: 919 SDGWEKQKNRFLQIPTGRTPTAQ-SDTRVQ--FHQDQIHFLVVHETQLAI 965
G L P P A+ SD VQ +H FL + A+
Sbjct: 893 MRG-------DLMAPLMYLPVAEHSDKVVQCRWHPHDFSFLSTSADRSAV 935
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 84 (34.6 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H+ V I +S ++ L ++C DK++ +WDA G K ++ H V S C + +
Sbjct: 254 HIDTVAYIRWSPDDRYL--LSCSCDKSVILWDAFTGEKLRDYK-HGFSV-SCCCWLPDGL 309
Query: 512 QFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTY-QGFRK 562
FI + D I W +L + Y+ MA ++DGT+ Y GF +
Sbjct: 310 SFITGSP-DCHITHW---SLNGEILYKWEDVNIYDMALTSDGTKLYIVGFEQ 357
Score = 75 (31.5 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 29/115 (25%), Positives = 57/115 (49%)
Query: 16 LEQESGFFF---NMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLEA 72
LE+E+G ++K + V G+W E S ++ D + F ++KQ+ LE
Sbjct: 31 LEKETGLVSETEDVKRLKQAVLQGDWITAEAAFS-IMQLRDESKRKEAQFLLQKQRCLEL 89
Query: 73 LDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQLSK--YGDTK 125
+A+ +L ++ + + FN+E + ++ +L N NE ++K YG+T+
Sbjct: 90 ARSGAICEAIYVL-QNFES-TDFNKEKERLVSIILESNNKSNNELITKNGYGNTR 142
Score = 68 (29.0 bits), Expect = 4.0e-05, Sum P(3) = 4.0e-05
Identities = 15/63 (23%), Positives = 34/63 (53%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNV-LVSSGADSQLCV 916
+D+ + G +D I+I++ ++ + L GH K + +A++ S+G D+ + +
Sbjct: 438 KDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRI 497
Query: 917 WSS 919
WS+
Sbjct: 498 WSN 500
Score = 58 (25.5 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 21/89 (23%), Positives = 41/89 (46%)
Query: 555 RTYQGFRKRSLGVVQ-FDTTKNRFLAAG-DDFSIKFWDMDSVQLLTSIDADGGLPASPRI 612
R Y G + + + F + F+ +G +D I+ W +S +LL ++ G + +
Sbjct: 419 RQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLS--GHVKCVNYV 476
Query: 613 RFNK-DGCLLAVSTNDNGIKILATSDGIR 640
+N D A + +DN ++I + D R
Sbjct: 477 AYNPVDPYQFASAGDDNTVRIWSNKDNPR 505
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 103 (41.3 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 34/166 (20%), Positives = 65/166 (39%)
Query: 402 ALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAF 461
++ KD V + + D A+ ++ IY G ++ + AH V +
Sbjct: 55 SIKKDEDDYVTALAITSDSKKLIAAFRSRLLTIYEIPSGRRIKS---MKAHETPVITMTI 111
Query: 462 SHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDG 521
N L T G + +KVWD + F GH + ++C +N + S A D
Sbjct: 112 DPTNTLLA--TGGAEGLVKVWDIAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDS 169
Query: 522 KIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGV 567
+++ W ++ S +E + + G+ G R +++ V
Sbjct: 170 RVRLWDLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSGSRDKTVQV 215
Score = 84 (34.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 31/115 (26%), Positives = 48/115 (41%)
Query: 809 VPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGM 867
V +SK+ + SAS K I L++ +P + A G
Sbjct: 468 VNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQL-ASGS 526
Query: 868 DDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS-SDG 921
D +I+I+NV + L+GH+ I L + +VS+ AD + VWS S G
Sbjct: 527 GDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSG 581
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 137 (53.3 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 33/117 (28%), Positives = 56/117 (47%)
Query: 411 VNRVIWSP-DGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
V + W+P D + F A V+++S + H ++ H G+N + + ++
Sbjct: 146 VMSIAWNPKDTNQFATASLDKTVKVWSINSP---HPHFTLEGHEKGINSVEYFSGGEKPY 202
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
+I+ DDK +K+WD + EGH V VC +H E + I S + DG +K W
Sbjct: 203 LISGADDKLVKIWDYQSKTCVQTLEGHSNNVSVVC-YHPE-LPLILSGSEDGTVKLW 257
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 132 (51.5 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 41/152 (26%), Positives = 70/152 (46%)
Query: 390 WDLGACSMPLQAALVK------DPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGD-E 442
WDL A + A+++K + VS R + L V+Y +++ ++ D
Sbjct: 212 WDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYDQYL-HVHDIRRPDAS 270
Query: 443 VRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATN-GAKQYIFEGHEAPVY 501
+ + AH G ++ +AF+ P+ + TC DKTI +WD N + + EGHE V
Sbjct: 271 TKPARSVHAHSGPIHSVAFN-PHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVT 329
Query: 502 SVC-PHHKENIQFIFSTALDGKIKAWLYDNLG 532
+ H+E I + ST+ D + W +G
Sbjct: 330 KISFSPHEEPI--LASTSADRRTLVWDLSRIG 359
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 100 (40.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 50/266 (18%), Positives = 108/266 (40%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
++WD C A +K V+ V W+PD S+ + ++ + G + L
Sbjct: 160 RLWD---CDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDAL 216
Query: 448 EIDAHVGGVNDIAFS--H--PNKQLCVITCGD-DKTIKVWDATNGAKQYIFEGHEAPVYS 502
H + + + H P+ ++ G D T+++W+ + GH AP+
Sbjct: 217 R--RHTKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITC 274
Query: 503 VCPHHKENIQFIFSTALDGKIKAW---------LYDNLGSRVDYEAPGRWCTTMAYSADG 553
V +N +I+S++ D I+ W + +RV++ + + + D
Sbjct: 275 V-RWGGQN--WIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLSLSTEHVLRSGAYDH 331
Query: 554 T----RTYQGFRKRSLGVVQ--FDTTKNRFLAAGDDFSIKFWD-MDSVQLLTSIDADGGL 606
T +++ R+++ + + R ++A DD + WD S + +T + G
Sbjct: 332 TDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMH--GHQ 389
Query: 607 PASPRIRFNKDGCLLAVSTNDNGIKI 632
F+ DG +A ++ D+ +++
Sbjct: 390 KVVNHASFSPDGRCIATASFDSSVRL 415
Score = 82 (33.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D IA DSS+++++ + + + L+GH + A+S +LVSS D+ L VW
Sbjct: 400 DGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVW 458
Score = 82 (33.9 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 15/60 (25%), Positives = 34/60 (56%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D+ ++ D+++++++VR ++K L GH ++ + +S + S GAD + +WS
Sbjct: 442 DSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIWS 501
>POMBASE|SPCC1672.07 [details] [associations]
symbol:SPCC1672.07 "U3 snoRNP-associated protein Utp21
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=NAS] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=ISO]
[GO:0005819 "spindle" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0032153
"cell division site" evidence=IDA] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPCC1672.07
GO:GO:0005829 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672 GO:GO:0032153
GO:GO:0044732 eggNOG:COG2319 GO:GO:0006364 GO:GO:0032040
GO:GO:0005732 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
OrthoDB:EOG46T68Q PIR:T41051 RefSeq:NP_587878.1
ProteinModelPortal:O14053 STRING:O14053 EnsemblFungi:SPCC1672.07.1
GeneID:2539299 KEGG:spo:SPCC1672.07 NextBio:20800466 Uniprot:O14053
Length = 902
Score = 98 (39.6 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 32/131 (24%), Positives = 57/131 (43%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
+ ++++A+ DD I+I +V+ ++ +L GHS R+T FS LV++ D +
Sbjct: 538 YQHSSDLVAVACDDFGIRIVDVQTRKIVRELWGHSNRLTSFDFSDTGRWLVTASLDGTIR 597
Query: 916 VWS-SDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECV 974
W G + T T D H DQ+ + T L++F+ + +
Sbjct: 598 TWDLPTGHLIDSISTPSVCTSLTFAPTGDYLATTHVDQVGISLW--TNLSMFKHVSTKAL 655
Query: 975 KQWVPRESSAP 985
+ E SAP
Sbjct: 656 RLDDVVEVSAP 666
Score = 91 (37.1 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVW--DATNGAKQYIFE--GHEAPV 500
Q++ +AH G + I F N Q ++T G D ++K W D+ +GA + + GH P
Sbjct: 281 QNVTYNAHFGSLPKIQFL--NGQPILVTAGPDNSLKEWIFDSMDGAPRILRSRNGHYEPP 338
Query: 501 YSVCPHHKENIQFIFSTALDGKIKA 525
S + +++ F+ S A D ++A
Sbjct: 339 -SFVKFYGKSVHFLISAATDRSLRA 362
Score = 45 (20.9 bits), Expect = 5.1e-05, Sum P(3) = 5.1e-05
Identities = 10/43 (23%), Positives = 19/43 (44%)
Query: 338 TVTRTLNQGSSPMSMDFHPVQQTLLLVGTN-VGDIGLWEVGSR 379
++ Q +S F T +L +N +GD+ W++ R
Sbjct: 237 SILMEFKQDGQVLSCSFR-TDGTPILASSNPIGDLSFWDLSKR 278
>FB|FBgn0037094 [details] [associations]
symbol:CG7611 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00530000063585
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 OMA:IRGQFYQ
EMBL:AY069717 RefSeq:NP_001163489.1 RefSeq:NP_649326.1
RefSeq:NP_730644.1 RefSeq:NP_730645.1 RefSeq:NP_730646.1
RefSeq:NP_730647.1 RefSeq:NP_730648.1 RefSeq:NP_730649.1
RefSeq:NP_730650.1 UniGene:Dm.7009 ProteinModelPortal:Q7K0L4
SMR:Q7K0L4 IntAct:Q7K0L4 STRING:Q7K0L4 PaxDb:Q7K0L4 PRIDE:Q7K0L4
EnsemblMetazoa:FBtr0078359 EnsemblMetazoa:FBtr0078361
EnsemblMetazoa:FBtr0078362 EnsemblMetazoa:FBtr0078363
EnsemblMetazoa:FBtr0078364 EnsemblMetazoa:FBtr0078365
EnsemblMetazoa:FBtr0078366 EnsemblMetazoa:FBtr0301197
EnsemblMetazoa:FBtr0301198 GeneID:40386 KEGG:dme:Dmel_CG7611
FlyBase:FBgn0037094 InParanoid:Q7K0L4 OrthoDB:EOG4BG7B3
PhylomeDB:Q7K0L4 GenomeRNAi:40386 NextBio:818511 Bgee:Q7K0L4
Uniprot:Q7K0L4
Length = 630
Score = 88 (36.0 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 40/172 (23%), Positives = 74/172 (43%)
Query: 29 FEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIF---FEIRKQKYLEALDKHDRAKAVEIL 85
F + V G+W + L + DN I F + +QKYLE LD + A+ +L
Sbjct: 136 FREHVLMGDWSKADSDLKDLEPLIDNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVL 195
Query: 86 VKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKY-GDTKSARSIMLVELKKLIEANPL 144
+L N +++ + ++ Q +K+ G +R++++ L+ + + +
Sbjct: 196 RSELTPLQ-HNITRVHQLSSYMMCSTNQDLYQRAKWEGKGILSRALVMERLQTFMPPSVM 254
Query: 145 FRDKLQFPNLKNSRLRTLINQS--LNWQHQLCKNPRPNPDIKT--LFVDHTC 192
+ RLRTL+ Q+ L QH C + +++T L DH C
Sbjct: 255 MSPR---------RLRTLLQQAVELQSQHCPCHDMAWETNLETVSLLTDHCC 297
Score = 79 (32.9 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 14/60 (23%), Positives = 37/60 (61%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL-NVLVSSGADSQLCVW 917
+ + +A G +D + I++++ +E +KL GH+K + ++++ ++L S+ D+ + +W
Sbjct: 543 NESFVASGSEDKVVYIWHIKREEPLAKLAGHTKTVNCVSWNPVYPSLLASASDDATVRIW 602
Score = 62 (26.9 bits), Expect = 5.2e-05, Sum P(3) = 5.2e-05
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 377 GSRERLVLRNFKVWDLGACSMPLQAALVKD--PGVSVNRVIWSPDGSLFGVAYSRHIVQI 434
GS++ V+ +WD+ + L+ V D +SV+ V WSPD L V + ++
Sbjct: 332 GSKDSTVI----IWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDSKLILVGGTEDSHEL 387
Query: 435 YSYHGGD 441
Y ++ D
Sbjct: 388 YIWNVDD 394
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 34/115 (29%), Positives = 59/115 (51%)
Query: 412 NRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVI 471
N V ++P+G+ A S H V+I+ +++ QH ++ H GVN ++F HP ++
Sbjct: 190 NFVDFNPNGTCIASAGSDHAVKIWDIRM-NKLLQHYQV--HSCGVNCLSF-HPLGN-SLV 244
Query: 472 TCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T D T+K+ D G Y +GH PV++V K+ + + S D ++ W
Sbjct: 245 TASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVS-FSKDG-ELLTSGGADAQVLIW 297
Score = 99 (39.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 33/116 (28%), Positives = 52/116 (44%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V V +S DG L A ++++S R + H V FS P+ +L +
Sbjct: 105 VRSVDFSADGQLLVTASEDKSIKVWSMF---RQRFLYSLYRHTHWVRCAKFS-PDGRL-I 159
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++C +DKTIK+WD TN KQ + ++ ++ N I S D +K W
Sbjct: 160 VSCSEDKTIKIWDTTN--KQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIW 213
Score = 82 (33.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N+++ D ++++ ++ + L+GH+ + ++FS +L S GAD+Q+
Sbjct: 237 HPLGNSLVTAS-SDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVL 295
Query: 916 VWSSD 920
+W ++
Sbjct: 296 IWRTN 300
>RGD|628746 [details] [associations]
symbol:Copb2 "coatomer protein complex, subunit beta 2 (beta
prime)" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi
membrane" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IPI] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISO] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 RGD:628746
GO:GO:0006886 GO:GO:0000139 GO:GO:0030117 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
InterPro:IPR020472 PRINTS:PR00320 CTD:9276 HOVERGEN:HBG051076
InterPro:IPR016453 PIRSF:PIRSF005567 GO:GO:0030663 EMBL:AF002705
IPI:IPI00231953 RefSeq:NP_068533.1 UniGene:Rn.37178
ProteinModelPortal:O35142 IntAct:O35142 PRIDE:O35142 GeneID:60384
KEGG:rno:60384 NextBio:612083 Genevestigator:O35142 Uniprot:O35142
Length = 905
Score = 123 (48.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 35/127 (27%), Positives = 60/127 (47%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD-ATNGAKQ 490
+++++Y+ + V H+ +AH + IA HP + ++T DD IK+WD +
Sbjct: 81 IRVFNYNTLERV--HM-FEAHSDYIRCIAV-HPTQPF-ILTSSDDMLIKLWDWDKKWSCS 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
+FEGH V + + K+N QF S +LD IK W + E + + Y
Sbjct: 136 QVFEGHTHYVMQIVINPKDNNQFA-SASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYY 194
Query: 551 ADGTRTY 557
+ G + Y
Sbjct: 195 SGGDKPY 201
Score = 64 (27.6 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 12/61 (19%), Positives = 29/61 (47%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D + G DD ++I++ + +GH++ ++ F L ++++ D + +W
Sbjct: 198 DKPYLISGADDRLVKIWDYQNKTCVQTPEGHAQNVSCATFHPELPIIITGSEDGTVRIWH 257
Query: 919 S 919
S
Sbjct: 258 S 258
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 105 (42.0 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 32/111 (28%), Positives = 49/111 (44%)
Query: 417 SPDGSL-FGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGD 475
SPD L F +SR I +++ +R H G V +A H + L + T G
Sbjct: 69 SPDDKLLFSAGHSRQI-RVWDLETLKCIRSW---KGHEGPVMGMA-CHASGGL-LATAGA 122
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D+ + VWD G + F GH+ V S+ H N + S + D ++ W
Sbjct: 123 DRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVW 173
Score = 101 (40.6 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 63/263 (23%), Positives = 105/263 (39%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
R +VWDL + P V + G L A + V ++ GG
Sbjct: 82 RQIRVWDLETLKCIRSWKGHEGP---VMGMACHASGGLLATAGADRKVLVWDVDGG--FC 136
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCG-DDKTIKVWD--ATNGAKQY--IFEGHEAP 499
H H G V+ I F HP+ ++ G DD T++VWD A N K+ I E H +
Sbjct: 137 THY-FRGHKGVVSSILF-HPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSA 194
Query: 500 VYSVCPHHKENIQFIFSTALDGKIKAW-LYD-NLGSRV-DYEAPGRWCTTMAYSADGTRT 556
V S+ E+ +FS D + W L+D + + V YE TT++
Sbjct: 195 VTSIAL--SEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEA-VTTVSSGTPFASF 251
Query: 557 YQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMD-SVQLLTSIDADGGLPASPRIRFN 615
++ + D+ F+ G+ ++ W + S+ L +D + S +
Sbjct: 252 VASLDQKKSKKKESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSD--ITVSSDDEES 309
Query: 616 KDG-CLLAVSTNDNGIKILATSD 637
K G A+ +D+G+ + T+D
Sbjct: 310 KRGFTAAAMLPSDHGL-LCVTAD 331
Score = 82 (33.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 23/85 (27%), Positives = 38/85 (44%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSH-ALNVLVSSGADSQLCVWS 918
N +I G D +++++N GH+ I +AF+ + + VS D L VWS
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 919 SDGWEKQKNRFLQIPTGRTPTAQSD 943
DG + + + T R+ A D
Sbjct: 476 LDGISEDSEEPINLKT-RSVVAAHD 499
Score = 75 (31.5 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 29/132 (21%), Positives = 58/132 (43%)
Query: 801 TDSNPEEAVPCFALSKNDSYVMSASGGK-ISLFNXXXXXXXXXXXXXXXXXXXXXXHPQD 859
T N + FA K+ S+ +S SG + + +++ H +D
Sbjct: 443 TGHNGDILAVAFA-KKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKD 501
Query: 860 NNIIAIGMDDSSI------QIYNV-RVDEVKS--KLKGHSKRITGLAFSHALNVLVSSGA 910
N +A+ +DS + + ++ R+ ++ LKGH +RI + FS ++++
Sbjct: 502 INSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASG 561
Query: 911 DSQLCVWS-SDG 921
D + +W+ SDG
Sbjct: 562 DKTVKIWAISDG 573
Score = 72 (30.4 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 28/148 (18%), Positives = 53/148 (35%)
Query: 773 RNSSGKATASV--APQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGK-I 829
RN S T S +W+ P + + VT + + S D VM+ASG K +
Sbjct: 509 RNDSLVCTGSEDRTASIWRLPD---LVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTV 565
Query: 830 SLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGH 889
++ ++ G D ++++NV E + H
Sbjct: 566 KIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGAD-GLLKLWNVNTSECIATYDQH 624
Query: 890 SKRITGLAFSHALNVLVSSGADSQLCVW 917
++ LA ++ + G D+ + +W
Sbjct: 625 EDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 53 (23.7 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 691 GMNGDVRSLADVKPRIT---EESNDKS-KVWKLTELSEPNQ 727
G NGD+ ++A K + S D++ KVW L +SE ++
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSE 484
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 130 (50.8 bits), Expect = 0.00020, P = 0.00020
Identities = 54/174 (31%), Positives = 78/174 (44%)
Query: 396 SMPLQAALVKDPGVSVNRVIW----SPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDA 451
SM ALV G N +W SP G F A +++S D + L I A
Sbjct: 553 SMDTHTALVSYKGH--NHPVWDVSFSPLGHYFATASHDQTARLWSC---DHIYP-LRIFA 606
Query: 452 -HVGGVNDIAFSHPNKQLC-VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYS--VCPHH 507
H+ V+ ++F HPN C V T DKT ++WD + G +F GH APV S VCP
Sbjct: 607 GHLNDVDCVSF-HPNG--CYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDG 663
Query: 508 KENIQFIFSTALDGKIKAWLYDNLGSRV-DYEAPGRWCT-TMAYSADGTRTYQG 559
+ ++ + + DG I W G R+ G+ +++YS +G G
Sbjct: 664 R----WLSTGSEDGIINVWDIGT-GKRLKQMRGHGKNAIYSLSYSKEGNVLISG 712
Score = 99 (39.9 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 27/111 (24%), Positives = 47/111 (42%)
Query: 809 VPCFALSKNDSYVMSASGGKIS-LFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGM 867
V C + N YV + S K +++ P D ++ G
Sbjct: 612 VDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCP-DGRWLSTGS 670
Query: 868 DDSSIQIYNVRVDEVKSKLKGHSKR-ITGLAFSHALNVLVSSGADSQLCVW 917
+D I ++++ + +++GH K I L++S NVL+S GAD + VW
Sbjct: 671 EDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVW 721
Score = 87 (35.7 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 415 IWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
IWS DGS + +I + + DE + H G V +FS NK L ++
Sbjct: 492 IWSLDGSSLN---NPNIA--LNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYL--LSGS 544
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTAL-DGKIKAWLYDNL 531
+DKT+++W ++GH PV+ V + F+TA D + W D++
Sbjct: 545 EDKTVRLWSMDTHTALVSYKGHNHPVWDVS---FSPLGHYFATASHDQTARLWSCDHI 599
>FB|FBgn0027524 [details] [associations]
symbol:CG3909 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GeneTree:ENSGT00700000104507 KO:K12602 EMBL:AF132174
RefSeq:NP_649969.1 UniGene:Dm.3198 SMR:Q9XZ19 IntAct:Q9XZ19
MINT:MINT-1753051 STRING:Q9XZ19 EnsemblMetazoa:FBtr0082172
GeneID:41226 KEGG:dme:Dmel_CG3909 UCSC:CG3909-RA
FlyBase:FBgn0027524 InParanoid:Q9XZ19 OMA:HETWVEC OrthoDB:EOG4R7SSH
GenomeRNAi:41226 NextBio:822821 Uniprot:Q9XZ19
Length = 331
Score = 91 (37.1 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 28/126 (22%), Positives = 61/126 (48%)
Query: 431 IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ 490
+V+++ + ++ ++ H GV +A S + + + D T+ +WDA +G K+
Sbjct: 63 LVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIASSSL--DSTMCLWDARSGDKK 120
Query: 491 YIFEGHEAPVYSV--CPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAP-GRWCTTM 547
++ +++V P +K ++ S DGKI + + + +A G++ ++
Sbjct: 121 HLLSFGPVDLWTVQFSPCNK----YVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSI 176
Query: 548 AYSADG 553
AYS DG
Sbjct: 177 AYSPDG 182
Score = 85 (35.0 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 24/108 (22%), Positives = 46/108 (42%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P ++ ++ DD
Sbjct: 177 AYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSP-NSQLLLTASDDGH 235
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSS 919
+++Y+V +V L GH+ + +AFS SS +D+ + +W +
Sbjct: 236 MKLYDVTHSDVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWDT 283
Score = 75 (31.5 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 21/76 (27%), Positives = 36/76 (47%)
Query: 570 FDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNG 629
F L A DD +K +D+ ++ ++ + F++DG A S++DN
Sbjct: 220 FSPNSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVLC--VAFSEDGKHFASSSSDNS 277
Query: 630 IKILATSDGIRLLRTF 645
+KI TS+ + L TF
Sbjct: 278 VKIWDTSER-KCLHTF 292
>UNIPROTKB|E2RBV0 [details] [associations]
symbol:WDR61 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001162 "positive regulation of histone
H3-K79 methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0055087 "Ski complex"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0035327 "transcriptionally active chromatin"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0016593 "Cdc73/Paf1 complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
KO:K12602 OMA:IATGSHH EMBL:AAEX03002395 EMBL:AAEX03002396
RefSeq:XP_536215.2 ProteinModelPortal:E2RBV0
Ensembl:ENSCAFT00000022589 GeneID:479068 KEGG:cfa:479068
NextBio:20854309 Uniprot:E2RBV0
Length = 305
Score = 90 (36.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I+IY+V+ + L GH+ + +AF VSS +D + VW
Sbjct: 214 IKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVW 259
Score = 85 (35.0 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 34/134 (25%), Positives = 56/134 (41%)
Query: 451 AHVGGVNDIAFSHPNKQLC--VITCGDDKTIKVWDATNGAK--QYIFEGHEAPVYSVCPH 506
AH + +A+ K+ V+T D +KVW + Q+ EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSLEGHQLGVVSVDIS 73
Query: 507 HKENIQFIFSTALDGKIKAWLYDNLGSRV---DYEAPGRWCTTMAYSADGTRTYQGFRKR 563
H + S++LD I+ W DN G ++ D W T+A+S D G
Sbjct: 74 H--TLPIAASSSLDAHIRLWDLDN-GKQIKSIDAGPVDAW--TLAFSPDSQYLATGTHVG 128
Query: 564 SLGVVQFDTTKNRF 577
+ + ++ K +
Sbjct: 129 KVNIFGVESGKKEY 142
Score = 83 (34.3 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/109 (29%), Positives = 48/109 (44%)
Query: 532 GSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGD--DFSIKFW 589
GS D +WC D + +G + LGVV D + +AA D I+ W
Sbjct: 38 GSLDDLVKVWKWCDERL---DLQWSLEGHQ---LGVVSVDISHTLPIAASSSLDAHIRLW 91
Query: 590 DMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDG 638
D+D+ + + SIDA G + A + F+ D LA T+ + I G
Sbjct: 92 DLDNGKQIKSIDA-GPVDAWT-LAFSPDSQYLATGTHVGKVNIFGVESG 138
>UNIPROTKB|F1NFT8 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0055087
"Ski complex" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087
OMA:IATGSHH IPI:IPI00584957 EMBL:AADN02040454
ProteinModelPortal:F1NFT8 PRIDE:F1NFT8 Ensembl:ENSGALT00000034634
Uniprot:F1NFT8
Length = 305
Score = 90 (36.7 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 27/108 (25%), Positives = 44/108 (40%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSS 919
I+IY+V+ + L GH + +AF VSS +D + VW +
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDA 261
Score = 76 (31.8 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV D + +AA D I+ WD+++ + + SIDA G + A + F+ D LA
Sbjct: 65 LGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDA-GPVDAWS-LAFSPDSQFLA 122
Query: 623 VSTNDNGIKILATSDG 638
++ + I G
Sbjct: 123 TGSHVGKVNIFGVETG 138
Score = 76 (31.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 35/135 (25%), Positives = 56/135 (41%)
Query: 451 AHVGGVNDIAFSHPNKQ--LCVITCGDDKTIKVWDATNGAK---QYIFEGHEAPVYSVCP 505
AH + +A+ K VI+ D +KVW N K Q+ EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWK-WNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 506 HHKENIQFIFSTALDGKIKAWLYDNLGSRV---DYEAPGRWCTTMAYSADGTRTYQGFRK 562
H +I S++LD I+ W + G ++ D W ++A+S D G
Sbjct: 73 SHTGSIAA--SSSLDAHIRLWDLET-GKQIKSIDAGPVDAW--SLAFSPDSQFLATGSHV 127
Query: 563 RSLGVVQFDTTKNRF 577
+ + +T K +
Sbjct: 128 GKVNIFGVETGKKEY 142
Score = 49 (22.3 bits), Expect = 7.1e-05, Sum P(3) = 7.1e-05
Identities = 9/39 (23%), Positives = 22/39 (56%)
Query: 494 EGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAWLYDN 530
+ H+ ++SV + K+ + + S +LD +K W +++
Sbjct: 13 QAHDDAIWSVAWGKNKKDGSETVISGSLDDLVKVWKWND 51
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 128 (50.1 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 39/139 (28%), Positives = 61/139 (43%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
K+W L + P+ A ++ + V RV W P G G H +++ +E+ L
Sbjct: 291 KLWSLDS-DEPI--ADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEI---L 344
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHH 507
+ H GV+D+ F HP+ L T G D +VWD G EGH +YS+ +
Sbjct: 345 HQEGHSKGVHDLHF-HPDGSLAG-TGGLDSFARVWDLRTGRCVMFLEGHIKEIYSI--NF 400
Query: 508 KENIQFIFSTALDGKIKAW 526
N + + + D K W
Sbjct: 401 SPNGFHVATGSGDNACKVW 419
Score = 51 (23.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 13/64 (20%), Positives = 27/64 (42%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P D + + G D++ +I+ L GH ++ G+ S ++ + D +
Sbjct: 444 PNDGHYLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGVDLSPDGQLIATCSYDRTFKL 503
Query: 917 WSSD 920
W S+
Sbjct: 504 WMSE 507
>FB|FBgn0038666 [details] [associations]
symbol:Smu1 "SMU1 ortholog" species:7227 "Drosophila
melanogaster" [GO:0003674 "molecular_function" evidence=ND]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0072553 "terminal button organization" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:AE014297
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007528 GO:GO:0007274 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GO:GO:0072553 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:AY051929 RefSeq:NP_001247189.1
RefSeq:NP_001247190.1 RefSeq:NP_650766.1 UniGene:Dm.1247 SMR:Q9VE18
EnsemblMetazoa:FBtr0083721 EnsemblMetazoa:FBtr0304689
EnsemblMetazoa:FBtr0304690 GeneID:42272 KEGG:dme:Dmel_CG5451
UCSC:CG5451-RA FlyBase:FBgn0038666 InParanoid:Q9VE18
OrthoDB:EOG4MKKXF GenomeRNAi:42272 NextBio:827995 Uniprot:Q9VE18
Length = 509
Score = 102 (41.0 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 47/245 (19%), Positives = 102/245 (41%)
Query: 806 EEAVPCFALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIA 864
E+AV S++ V S A G+I ++ +DN+ +
Sbjct: 264 EQAVLALNFSRDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVL 323
Query: 865 IGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEK 924
D +++++ ++ ++ + KGHS + F+ + ++S+ +D + VWS E
Sbjct: 324 SASFDYTVRLHGLKSGKMLKEFKGHSSFVNEATFTPDGHSVLSASSDGTVKVWSLKTTEC 383
Query: 925 QKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWVP--RES 982
P G +T + ++ HF+V + + + + + V+ + RE
Sbjct: 384 VAT---YKPLGNELAV--NTVLILPKNPEHFIVCNRSNTVVIMNMQGQIVRSFSSGKREG 438
Query: 983 SAPITHATFSCDSQLVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSSNVHPLVIA 1042
A I+ AT S + +Y D + FS ++ KL +N G++ + H ++A
Sbjct: 439 GAFIS-ATLSPRGEFIYCAGEDQVLYCFSVSSGKLERTLNVHEKDVIGLTH-HPHQNLLA 496
Query: 1043 AHPQE 1047
++ ++
Sbjct: 497 SYSED 501
Score = 78 (32.5 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 36/164 (21%), Positives = 66/164 (40%)
Query: 16 LEQESGFFFN----MKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSMKIFFEIRKQKYLE 71
L++E+G N + F ++ NG+WD V K K+ D + + +Q LE
Sbjct: 30 LQEETGVSLNTVDSVDGFVQDISNGHWDTVLKVTQSL-KLPDKK-----LLNLYEQIVLE 83
Query: 72 ALDKHDRAKAVEIL--VKDLKVFSTFNEELFKEITQLLTLENFRENEQLSKYGDTKSARS 129
++ + A +L + + E + + +L F E ++ + R+
Sbjct: 84 LIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENMLQRAYFDPREAYAEGSSKEKRRT 143
Query: 130 IMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQ-HQ 172
++ EL + P +SRL L+ Q+L WQ HQ
Sbjct: 144 VIAQELSGEVHVVP------------SSRLLALLGQALKWQQHQ 175
>DICTYBASE|DDB_G0276283 [details] [associations]
symbol:utp13 "U3 snoRNP protein" species:44689
"Dictyostelium discoideum" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA;ISS]
[GO:0030515 "snoRNA binding" evidence=ISS] [GO:0005732 "small
nucleolar ribonucleoprotein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276283
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000014 GenomeReviews:CM000151_GR
GO:GO:0006364 GO:GO:0032040 GO:GO:0005732 KO:K14555 OMA:ADSKLIR
RefSeq:XP_643223.1 ProteinModelPortal:Q7KWS8 STRING:Q7KWS8
EnsemblProtists:DDB0237552 GeneID:8620427 KEGG:ddi:DDB_G0276283
InParanoid:Q7KWS8 ProtClustDB:CLSZ2741707 Uniprot:Q7KWS8
Length = 902
Score = 113 (44.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
+N + +P+ +F A V++++ + + + I AH GV + FS P Q C
Sbjct: 530 INSISIAPNDKIFATASQDSYVKLWNVNNLEPITS---IKAHRRGVWHVEFS-PIDQ-CF 584
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
+TC D TIK+W ++ EGH+ V +Q + S A +G IK W
Sbjct: 585 LTCSADGTIKIWSLSDYTCLKTLEGHKGSVLKAS-FISFGMQIV-SVASEGLIKLW 638
Score = 89 (36.4 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 44/180 (24%), Positives = 70/180 (38%)
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGK-IKAWL- 527
+I+ DK+ +WD GH + V K + TA D + IK W
Sbjct: 439 IISGSRDKSAMIWDLEKKESIAQLTGHTGVISCVALPKKPSTSMFAITASDDRTIKLWKG 498
Query: 528 YDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIK 587
+ S ++ + SA T+ S+ + D F A D +K
Sbjct: 499 FSTTSSSGGDDSKKK---DKKISASVTKIAHEKDINSISIAPNDKI---FATASQDSYVK 552
Query: 588 FWDMDSVQLLTSIDADGGLPASPRIRFNK-DGCLLAVSTNDNGIKILATSDGIRLLRTFE 646
W++++++ +TSI A + F+ D C L S D IKI + SD L+T E
Sbjct: 553 LWNVNNLEPITSIKAHRR--GVWHVEFSPIDQCFLTCSA-DGTIKIWSLSD-YTCLKTLE 608
Score = 77 (32.2 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 13/56 (23%), Positives = 32/56 (57%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I+++ + I+++N++ +E + +GH +I L+ + ++ G+DS+L W
Sbjct: 626 IVSVA-SEGLIKLWNIKTNECLNTFEGHESKIWALSVAKDQERFITGGSDSKLIAW 680
Score = 66 (28.3 bits), Expect = 8.7e-05, Sum P(3) = 8.7e-05
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWD 483
H+ ++ I FS+ K+L I+ G DK + VWD
Sbjct: 210 HLSQISGITFSNSGKEL--ISSGRDKVLNVWD 239
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 352 MDFHPVQQTLLLVGTNVGDIGLWEVGSRERLVLR 385
+D + ++V TN +I +++ ++ VLR
Sbjct: 388 IDIKYINDDNIIVATNSNEIKTYDLNTKRAQVLR 421
>UNIPROTKB|Q2TBM8 [details] [associations]
symbol:WDR26 "WD repeat domain 26" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000160946 HOVERGEN:HBG083958 OMA:IRGQFYQ
OrthoDB:EOG4GHZNV CTD:80232 EMBL:DAAA02042638 EMBL:BC109897
IPI:IPI00702354 RefSeq:NP_001070527.1 UniGene:Bt.21955
Ensembl:ENSBTAT00000034200 GeneID:767999 KEGG:bta:767999
InParanoid:Q2TBM8 NextBio:20918354 Uniprot:Q2TBM8
Length = 514
Score = 90 (36.7 bits), Expect = 8.7e-05, Sum P(4) = 8.7e-05
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 857 PQDNNIIAIGMDD-SSIQIYNVRVDEVKSKL-KGHSKRITGLAFSHALNVLVSSGADSQL 914
P DN ++A G DD S + ++NV+ E+++K+ + H +T +A++ V+ G Q
Sbjct: 264 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 323
Query: 915 CVWSSDG-----WEKQKNRFLQ-IPTGRTPTAQSDT 944
DG WE + + L + G+T A SDT
Sbjct: 324 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 358
Score = 81 (33.6 bits), Expect = 8.7e-05, Sum P(4) = 8.7e-05
Identities = 33/142 (23%), Positives = 68/142 (47%)
Query: 58 MKIFFEIRKQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 117
+++ F + +QKYLE L+ +A+++L +L +N E ++ L + +
Sbjct: 62 VRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLK-YNTERIHVLSGYLMCSHAEDLRA 120
Query: 118 LSKY-GDTKSARSIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLC-- 174
+++ G ++RS +L +L+ + + + L RL+TL+ Q++ Q C
Sbjct: 121 KAEWEGKGTASRSKLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLY 171
Query: 175 KNPR--PNPDIKTLFVDHTCGQ 194
N + N D +L +DH C +
Sbjct: 172 HNTKLDSNLDSVSLLIDHVCSR 193
Score = 52 (23.4 bits), Expect = 8.7e-05, Sum P(4) = 8.7e-05
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 613 RFNKDGCLLAVSTNDNGIKILATSDG---IRLLRTFENLAYDAS 653
+F+ DG LA + D + I ++LL+T E AY S
Sbjct: 215 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVS 258
Score = 40 (19.1 bits), Expect = 8.7e-05, Sum P(4) = 8.7e-05
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1041 IAAHPQEPNEFALGLSDGGVHVFEP 1065
++ +PQ P+ A DG V ++ P
Sbjct: 472 VSWNPQIPSMMASASDDGTVRIWGP 496
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 412 NRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVI 471
N V ++P G+ A S V+++ +++ QH ++ H GGVN I+F HP+ +I
Sbjct: 148 NFVDFNPSGTCIASAGSDQTVKVWDVRV-NKLLQHYQV--HSGGVNCISF-HPSGNY-LI 202
Query: 472 TCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T D T+K+ D G Y +GH PV++V + + S D ++ W
Sbjct: 203 TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS--FSKGGELFASGGADTQVLLW 255
Score = 97 (39.2 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V V +S DG A ++++S + R + H V FS P+ +L +
Sbjct: 63 VRSVDFSADGQFLATASEDKSIKVWSMY---RQRFLYSLYRHTHWVRCAKFS-PDGRL-I 117
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++C +DKTIK+WD TN KQ + ++ ++ + I S D +K W
Sbjct: 118 VSCSEDKTIKIWDTTN--KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 171
Score = 81 (33.6 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I D +++I ++ + L+GH+ + ++FS + S GAD+Q+
Sbjct: 195 HPSGNYLITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 253
Query: 916 VWSSD 920
+W ++
Sbjct: 254 LWRTN 258
>TAIR|locus:2176897 [details] [associations]
symbol:AT5G52820 "AT5G52820" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AB009055 HSSP:P16649
InterPro:IPR011044 SUPFAM:SSF50969 PRINTS:PR00319 GO:GO:0080008
EMBL:AK227330 EMBL:BT004562 IPI:IPI00528132 RefSeq:NP_200094.1
UniGene:At.29592 ProteinModelPortal:Q9FLX9 SMR:Q9FLX9 STRING:Q9FLX9
PaxDb:Q9FLX9 PRIDE:Q9FLX9 EnsemblPlants:AT5G52820.1 GeneID:835359
KEGG:ath:AT5G52820 GeneFarm:3344 TAIR:At5g52820
HOGENOM:HOG000091641 InParanoid:Q9FLX9 KO:K14855 OMA:HFTCKGH
PhylomeDB:Q9FLX9 ProtClustDB:CLSN2686131 Genevestigator:Q9FLX9
InterPro:IPR012972 Pfam:PF08154 Uniprot:Q9FLX9
Length = 473
Score = 92 (37.4 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 63/293 (21%), Positives = 115/293 (39%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
++WDL PL K V V WSPDG V+ S+ +I ++ +
Sbjct: 134 RLWDLYT-ETPLFTC--KGHKNWVLTVAWSPDGKHL-VSGSKS-GEICCWNPKKGELEGS 188
Query: 448 EIDAH---VGGVN--DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYS 502
+ H + G++ + S P ++ +T D ++WD T GH V
Sbjct: 189 PLTGHKKWITGISWEPVHLSSPCRRF--VTSSKDGDARIWDITLKKSIICLSGHTLAVTC 246
Query: 503 VCPHHKENIQFIFSTALDGKIKAWLYDNLGSRV-DYEAPGRWCTTMAYSA---------D 552
V + I I++ + D IK W G + + + G W ++A S D
Sbjct: 247 V-KWGGDGI--IYTGSQDCTIKMW-ETTQGKLIRELKGHGHWINSLALSTEYVLRTGAFD 302
Query: 553 GT-RTYQGFRKRSLGVVQFDTTKN----RFLAAGDDFSIKFWDMDSVQLLTSIDADGGLP 607
T R Y ++ + +++ TK R ++ DDF++ W+ SV G
Sbjct: 303 HTGRQYPPNEEKQKALERYNKTKGDSPERLVSGSDDFTMFLWE-PSVSKQPKKRLTGHQQ 361
Query: 608 ASPRIRFNKDGCLLAVSTNDNGIKIL--ATSDGIRLLRTFENLAYDASRTSEN 658
+ F+ DG +A ++ D +++ T + + R Y S ++++
Sbjct: 362 LVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADS 414
Score = 87 (35.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ G DS+++I+ +R ++K L GH+ + + +S +VS G D L +W
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>CGD|CAL0003392 [details] [associations]
symbol:PWP2 species:5476 "Candida albicans" [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030515 "snoRNA
binding" evidence=IEA] [GO:0034388 "Pwp2p-containing subcomplex of
90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030010 "establishment of cell polarity" evidence=IEA]
[GO:0000472 "endonucleolytic cleavage to generate mature 5'-end of
SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0000447
"endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S
rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] [GO:0000480 "endonucleolytic
cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 109 (43.4 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 410 SVNRVIWSPDGS--LFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQ 467
+VN V + G FG A ++ +Y + + L+ H +N + +S +
Sbjct: 298 AVNTVNINKTGEWLAFGSAKLGQLL-VYEWQSESYI---LKQQGHFDSMNTLCYSPDGSR 353
Query: 468 LCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
L +T DD IK+WD +G F H + V V + Q +FS++LDG I+AW
Sbjct: 354 L--VTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQV--QFAKRGQVLFSSSLDGTIRAW 408
Score = 72 (30.4 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P I+ D I +++V+ ++ L GH I+ L F ++L S+ D + +
Sbjct: 434 PSGEVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRI 493
Query: 917 WS 918
W+
Sbjct: 494 WN 495
Score = 64 (27.6 bits), Expect = 0.00058, Sum P(4) = 0.00058
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 582 DDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
D F I W + + QLL S+ G P S + F K+ +LA ++ D I+I
Sbjct: 445 DTFEIYVWSVQTGQLLDSLTGHEG-PISC-LTFGKENSILASASWDKTIRI 493
Score = 50 (22.7 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 354 FHPVQQTLLLVGTNVGDIGLWEV 376
FHP Q LL+VG G+ L+E+
Sbjct: 262 FHP-QSKLLVVGFTNGEFRLYEI 283
Score = 42 (19.8 bits), Expect = 0.00058, Sum P(4) = 0.00058
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 869 DSSIQIYNVRVDEVK--SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQK 926
D I N R E K +K K + +A+S L+++G ++ +C++ + E
Sbjct: 548 DGRKDIVNGRYLEDKFIAKNSNRGKYFSTIAYSFDGLTLLAAGNNNSICMYDIEN-EVLL 606
Query: 927 NRFL 930
RF+
Sbjct: 607 KRFI 610
>UNIPROTKB|Q5A852 [details] [associations]
symbol:PWP2 "Putative uncharacterized protein PWP2"
species:237561 "Candida albicans SC5314" [GO:0032040 "small-subunit
processome" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0003392 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0032040 EMBL:AACQ01000049 EMBL:AACQ01000048
KO:K14558 InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 RefSeq:XP_717900.1 RefSeq:XP_717966.1
ProteinModelPortal:Q5A852 STRING:Q5A852 GeneID:3640416
GeneID:3640479 KEGG:cal:CaO19.10786 KEGG:cal:CaO19.3276
Uniprot:Q5A852
Length = 922
Score = 109 (43.4 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 34/119 (28%), Positives = 55/119 (46%)
Query: 410 SVNRVIWSPDGS--LFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQ 467
+VN V + G FG A ++ +Y + + L+ H +N + +S +
Sbjct: 298 AVNTVNINKTGEWLAFGSAKLGQLL-VYEWQSESYI---LKQQGHFDSMNTLCYSPDGSR 353
Query: 468 LCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
L +T DD IK+WD +G F H + V V + Q +FS++LDG I+AW
Sbjct: 354 L--VTGSDDGKIKIWDVRSGFCLMTFTEHTSAVTQV--QFAKRGQVLFSSSLDGTIRAW 408
Score = 72 (30.4 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 15/62 (24%), Positives = 29/62 (46%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P I+ D I +++V+ ++ L GH I+ L F ++L S+ D + +
Sbjct: 434 PSGEVIVGGSQDTFEIYVWSVQTGQLLDSLTGHEGPISCLTFGKENSILASASWDKTIRI 493
Query: 917 WS 918
W+
Sbjct: 494 WN 495
Score = 64 (27.6 bits), Expect = 0.00058, Sum P(4) = 0.00058
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 582 DDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
D F I W + + QLL S+ G P S + F K+ +LA ++ D I+I
Sbjct: 445 DTFEIYVWSVQTGQLLDSLTGHEG-PISC-LTFGKENSILASASWDKTIRI 493
Score = 50 (22.7 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 354 FHPVQQTLLLVGTNVGDIGLWEV 376
FHP Q LL+VG G+ L+E+
Sbjct: 262 FHP-QSKLLVVGFTNGEFRLYEI 283
Score = 42 (19.8 bits), Expect = 0.00058, Sum P(4) = 0.00058
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 869 DSSIQIYNVRVDEVK--SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQK 926
D I N R E K +K K + +A+S L+++G ++ +C++ + E
Sbjct: 548 DGRKDIVNGRYLEDKFIAKNSNRGKYFSTIAYSFDGLTLLAAGNNNSICMYDIEN-EVLL 606
Query: 927 NRFL 930
RF+
Sbjct: 607 KRFI 610
>UNIPROTKB|F1PIR1 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:AAEX03005292
RefSeq:XP_003434930.1 ProteinModelPortal:F1PIR1
Ensembl:ENSCAFT00000025923 GeneID:480115 KEGG:cfa:480115
Uniprot:F1PIR1
Length = 514
Score = 90 (36.7 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 857 PQDNNIIAIGMDD-SSIQIYNVRVDEVKSKL-KGHSKRITGLAFSHALNVLVSSGADSQL 914
P DN ++A G DD S + ++NV+ E+++K+ + H +T +A++ V+ G Q
Sbjct: 264 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 323
Query: 915 CVWSSDG-----WEKQKNRFLQ-IPTGRTPTAQSDT 944
DG WE + + L + G+T A SDT
Sbjct: 324 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 358
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 33/142 (23%), Positives = 68/142 (47%)
Query: 58 MKIFFEIRKQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 117
+++ F + +QKYLE L+ +A+++L +L +N E ++ L + +
Sbjct: 62 VRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLK-YNTERIHVLSGYLMCSHAEDLRA 120
Query: 118 LSKY-GDTKSARSIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLC-- 174
+++ G ++RS +L +L+ + + + L RL+TL+ Q++ Q C
Sbjct: 121 KAEWEGKGTASRSKLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLY 171
Query: 175 KNPR--PNPDIKTLFVDHTCGQ 194
N + N D +L +DH C +
Sbjct: 172 HNTKLDNNLDSVSLLIDHVCSR 193
Score = 52 (23.4 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 613 RFNKDGCLLAVSTNDNGIKILATSDG---IRLLRTFENLAYDAS 653
+F+ DG LA + D + I ++LL+T E AY S
Sbjct: 215 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVS 258
Score = 40 (19.1 bits), Expect = 0.00011, Sum P(4) = 0.00011
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1041 IAAHPQEPNEFALGLSDGGVHVFEP 1065
++ +PQ P+ A DG V ++ P
Sbjct: 472 VSWNPQIPSMMASASDDGTVRIWGP 496
>MGI|MGI:1306796 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA;TAS]
[GO:0006309 "apoptotic DNA fragmentation" evidence=IGI] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=ISO;IGI;IMP] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0007420 "brain development" evidence=IMP] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=ISO] [GO:0010659
"cardiac muscle cell apoptotic process" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=IPI]
[GO:0016505 "apoptotic protease activator activity" evidence=IPI]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0031072 "heat
shock protein binding" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=ISO;IPI] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043293 "apoptosome" evidence=ISO]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0051402 "neuron apoptotic
process" evidence=IGI] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR000767 InterPro:IPR001315
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00619 Pfam:PF00931 PRINTS:PR00364
PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294 SMART:SM00320
EMBL:AF064071 MGI:MGI:1306796 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0006952 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
GO:GO:0043531 GO:GO:0006919 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 GO:GO:0016505 CTD:317
HOVERGEN:HBG018730 KO:K02084 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:BC131683 EMBL:BC131684 IPI:IPI00135366
IPI:IPI00654978 RefSeq:NP_001036023.1 RefSeq:NP_033814.2
UniGene:Mm.220289 PDB:3SFZ PDB:3SHF PDBsum:3SFZ PDBsum:3SHF
ProteinModelPortal:O88879 SMR:O88879 IntAct:O88879 STRING:O88879
PhosphoSite:O88879 PaxDb:O88879 PRIDE:O88879
Ensembl:ENSMUST00000020157 Ensembl:ENSMUST00000159110 GeneID:11783
KEGG:mmu:11783 GeneTree:ENSGT00700000104017 InParanoid:A2RRK8
ChiTaRS:APAF1 NextBio:279591 Bgee:O88879 CleanEx:MM_APAF1
Genevestigator:O88879 GermOnline:ENSMUSG00000019979 Uniprot:O88879
Length = 1249
Score = 107 (42.7 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 33/130 (25%), Positives = 58/130 (44%)
Query: 399 LQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVND 458
L +V+ +V +S DG + +Q++ G+++ L+I AH V
Sbjct: 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL---LDIKAHEDEVLC 662
Query: 459 IAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPH--HKENIQFIFS 516
AFS + + TC DK +K+WD+ G + ++ H V C H +K N + +
Sbjct: 663 CAFSSDDSYIA--TCSADKKVKIWDSATGKLVHTYDEHSEQVN--CCHFTNKSNHLLLAT 718
Query: 517 TALDGKIKAW 526
+ D +K W
Sbjct: 719 GSNDFFLKLW 728
Score = 84 (34.6 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGW 922
+A G +D +I+I + + V S GH K + + F+ L+SS DS + VW+ W
Sbjct: 976 VAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN---W 1032
Query: 923 EKQKNRFLQ 931
+ FLQ
Sbjct: 1033 QTGDYVFLQ 1041
Score = 63 (27.2 bits), Expect = 0.00095, Sum P(5) = 0.00095
Identities = 14/63 (22%), Positives = 28/63 (44%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
QD+ +++ D +++++NV ++ H + A S S+ AD +W
Sbjct: 1054 QDSRLLSWSFD-GTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112
Query: 918 SSD 920
S D
Sbjct: 1113 SFD 1115
Score = 54 (24.1 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F + FL A DD +I+ W+ V ++I L + F ++ ++ N
Sbjct: 888 VMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIV----LKQEIDVVFQENETMVLAVDNI 943
Query: 628 NGIKILATSDG 638
G++++A G
Sbjct: 944 RGLQLIAGKTG 954
Score = 48 (22.0 bits), Expect = 0.00095, Sum P(5) = 0.00095
Identities = 6/28 (21%), Positives = 16/28 (57%)
Query: 742 ISRLIFTNSGNAILALASNAIHLLWKWQ 769
+ + FT G +++ + +++ +W WQ
Sbjct: 1006 VRHIQFTADGKTLISSSEDSVIQVWNWQ 1033
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 296 TRPIGISDEINLPVNVLPV-SFTGXXXXXXXXQAFST--PEDLP 336
TR ++D + P +V+PV S G F EDLP
Sbjct: 264 TRDKSVTDSVMGPKHVVPVESGLGREKGLEILSLFVNMKKEDLP 307
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 946 VQFHQDQIH-FLVVHETQLAI--FETTKLECVKQWVPRESSAPITHATFSCDSQLVYACF 1002
+Q HQ+ + F ++ +++L F+ T VK W + I F+C V +C
Sbjct: 1040 LQAHQETVKDFRLLQDSRLLSWSFDGT----VKVW--NVITGRIER-DFTCHQGTVLSCA 1092
Query: 1003 LDATVCVFSAANLKLRCRI 1021
+ + FS+ + +I
Sbjct: 1093 ISSDATKFSSTSADKTAKI 1111
>ASPGD|ASPL0000054968 [details] [associations]
symbol:AN1387 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319
EMBL:AACD01000019 HOGENOM:HOG000208957 KO:K12601 OMA:RNCVATH
OrthoDB:EOG4SJ8PN RefSeq:XP_658991.1 ProteinModelPortal:Q5BDJ3
EnsemblFungi:CADANIAT00001220 GeneID:2877164 KEGG:ani:AN1387.2
Uniprot:Q5BDJ3
Length = 306
Score = 126 (49.4 bits), Expect = 0.00012, P = 0.00012
Identities = 40/143 (27%), Positives = 61/143 (42%)
Query: 388 KVWDLGACSMPLQAALVKDP-GVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQH 446
KVWD+ A ++ K G ++ SPDG + V I+S G R
Sbjct: 126 KVWDMNANEEEIRDHETKGSFGTCIDL---SPDGRFIASGHENGSVYIFSTETG---RMP 179
Query: 447 LEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPH 506
+ V V +AFS K L GD + I ++D T+G + GH A + S+
Sbjct: 180 FSLSGLVKPVRSVAFSPGGKFLAA--AGDSRVIVLYDTTSGEQVASLTGHAAWILSLS-- 235
Query: 507 HKENIQFIFSTALDGKIKAWLYD 529
+++ S + DGK+K W D
Sbjct: 236 WSNTGEYLLSGSFDGKVKVWSID 258
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 126 (49.4 bits), Expect = 0.00026, P = 0.00026
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 412 NRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVI 471
N V ++P G+ A S V+++ +++ QH ++ H GGVN I+F HP+ +I
Sbjct: 190 NFVDFNPSGTCIASAGSDQTVKVWDVRV-NKLLQHYQV--HSGGVNCISF-HPSGNY-LI 244
Query: 472 TCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T D T+K+ D G Y +GH PV++V + + S D ++ W
Sbjct: 245 TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS--FSKGGELFASGGADTQVLLW 297
Score = 97 (39.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 31/116 (26%), Positives = 52/116 (44%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V V +S DG A ++++S + R + H V FS P+ +L +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMY---RQRFLYSLYRHTHWVRCAKFS-PDGRL-I 159
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++C +DKTIK+WD TN KQ + ++ ++ + I S D +K W
Sbjct: 160 VSCSEDKTIKIWDTTN--KQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVW 213
Score = 91 (37.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 33/129 (25%), Positives = 57/129 (44%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV--CPHHKE 509
H + + S KQL T D + +W+ A+ Y + GH+ V SV PH
Sbjct: 17 HKAAITSLDLSPNGKQLA--TASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHG-- 72
Query: 510 NIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQ 569
N+ + S + D ++ W+ D G +++A ++ +SADG +S+ V
Sbjct: 73 NL--LASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV-- 128
Query: 570 FDTTKNRFL 578
+ + RFL
Sbjct: 129 WSMYRQRFL 137
Score = 81 (33.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I D +++I ++ + L+GH+ + ++FS + S GAD+Q+
Sbjct: 237 HPSGNYLITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 295
Query: 916 VWSSD 920
+W ++
Sbjct: 296 LWRTN 300
>UNIPROTKB|O94967 [details] [associations]
symbol:WDR47 "WD repeat-containing protein 47" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0007275 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CH471122 eggNOG:COG2319
EMBL:AL449266 GO:GO:0005874 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX679664 EMBL:AB020700 EMBL:AK289789
EMBL:BC034964 EMBL:BC039254 IPI:IPI00217629 IPI:IPI00479795
IPI:IPI00645640 RefSeq:NP_001136023.1 RefSeq:NP_055784.3
UniGene:Hs.570055 ProteinModelPortal:O94967 SMR:O94967
IntAct:O94967 MINT:MINT-1381291 STRING:O94967 PhosphoSite:O94967
PaxDb:O94967 PRIDE:O94967 DNASU:22911 Ensembl:ENST00000357672
Ensembl:ENST00000361054 Ensembl:ENST00000369962
Ensembl:ENST00000369965 GeneID:22911 KEGG:hsa:22911 UCSC:uc001dwi.3
UCSC:uc001dwj.3 UCSC:uc001dwk.2 CTD:22911 GeneCards:GC01M109512
HGNC:HGNC:29141 HPA:HPA027287 HPA:HPA027289 neXtProt:NX_O94967
PharmGKB:PA134937302 HOGENOM:HOG000231412 HOVERGEN:HBG058798
ChiTaRS:WDR47 GenomeRNAi:22911 NextBio:43585 ArrayExpress:O94967
Bgee:O94967 CleanEx:HS_WDR47 Genevestigator:O94967
GermOnline:ENSG00000085433 Uniprot:O94967
Length = 919
Score = 85 (35.0 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 49/203 (24%), Positives = 93/203 (45%)
Query: 4 SSKKLFTSKHFLLEQESG-----FFFNMKYFEDEVHNGNWDDVEKYLSGFTKVDDNRYSM 58
+SKKL S LE+ESG F +M + + +G WD+V +++ ++ ++
Sbjct: 23 NSKKLHISM-LALEKESGVINGLFSDDMLFLRQLILDGQWDEVLQFIQPLECME--KFDK 79
Query: 59 KIF-FEIRKQKYLEAL------DKHDRAKAVEILVKD----LKVFSTF--NEELFKEITQ 105
K F + I KQK+LEAL D + +E +++ L + +++ + ++
Sbjct: 80 KRFRYIILKQKFLEALCVNNAMSAEDEPQHLEFTMQEAVQCLHALEEYCPSKDDYSKLCL 139
Query: 106 LLTLENFRENEQLSKYGDTKSARSIMLVELKKLI-EANPLFRDKLQFPNLK--NSRLRTL 162
LLTL + + + + +AR E ++ E P R KL K N+RL L
Sbjct: 140 LLTLPRLTNHAEFKDWNPS-TARVHCFEEACVMVAEFIPADR-KLSEAGFKASNNRLFQL 197
Query: 163 INQSLNWQH--QLCKNPRPNPDI 183
+ + L ++ + C++ +I
Sbjct: 198 VMKGLLYECCVEFCQSKATGEEI 220
Score = 75 (31.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 57/240 (23%), Positives = 91/240 (37%)
Query: 372 GLWEVGSRERL--VLRNFKVWDLGACSMPLQAALV----KDPGVSVNRVIWSPDGSLFGV 425
GL+ VGS + V V D A P Q + K S+ V WSP G L
Sbjct: 619 GLYAVGSNSKTLRVCAYPDVIDPSAHETPKQPVVRFKRNKHHKGSIYCVAWSPCGQLLAT 678
Query: 426 AYSRHIVQIYSYHGG--DEVRQHLEIDAHVGGVNDIAFSH-PNKQLCV-ITCG-DDKTIK 480
+ V++ ++ + LE H G + D+AF P + I+ G D I
Sbjct: 679 GSNDKYVKVLPFNAETCNATGPDLEFSMHDGTIRDLAFMEGPESGGAILISAGAGDCNIY 738
Query: 481 VWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAP 540
D G + GH + ++ + + I S + D ++ W D P
Sbjct: 739 TTDCQRGQGLHALSGHTGHILAL---YTWSGWMIASGSQDKTVRFW---------DLRVP 786
Query: 541 GRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAG-DDFSIKFWDMDSVQLLTS 599
C + GT T+ G ++ V D + R LA G +D S +D+ +++ S
Sbjct: 787 S--CVRVV----GT-TFHGTGS-AVASVAVDPS-GRLLATGQEDSSCMLYDIRGGRMVQS 837
Score = 71 (30.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDG 921
++A G +DSS +Y++R + HS + + FS + L++ D ++ V G
Sbjct: 814 LLATGQEDSSCMLYDIRGGRMVQSYHPHSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQG 873
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 128 (50.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 46/216 (21%), Positives = 88/216 (40%)
Query: 388 KVWDLGACSMP--LQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGD-EVR 444
++W+ + S + L + +V WSP G L A I+ +G + E
Sbjct: 52 RIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECI 111
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY----IFEGHEAPV 500
LE H V ++++ C+ TC DK++ +W+ G +Y + GH V
Sbjct: 112 STLE--GHENEVKSVSWNASGS--CLATCSRDKSVWIWEVLEG-NEYDCAAVLTGHTQDV 166
Query: 501 YSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGF 560
V H ++ +FS + D IK W ++ +Y+ T+ S +G
Sbjct: 167 KMVQWHPTMDV--LFSCSYDNTIKVWWSEDDDG--EYQC----VQTLGESNNG------- 211
Query: 561 RKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQL 596
++ + F+ ++ + DD ++K W D ++
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKM 247
Score = 44 (20.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 17/73 (23%), Positives = 33/73 (45%)
Query: 856 HPQDNNIIAIGMDDSSIQIY-NVRVDEVKS--------KLKGHSKRITGLAFS--HALNV 904
H ++IIA G D++I+++ + + D V K K H + + +S +
Sbjct: 274 HWSRDDIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHENDVNSVQWSPGEGNRL 333
Query: 905 LVSSGADSQLCVW 917
L S+ D + +W
Sbjct: 334 LASASDDGMVKIW 346
>DICTYBASE|DDB_G0295761 [details] [associations]
symbol:nle1 "putative notchless" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0295761 InterPro:IPR001632
GO:GO:0005634 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 PRINTS:PR00319
KO:K14855 OMA:HFTCKGH InterPro:IPR012972 Pfam:PF08154
RefSeq:XP_002649195.1 ProteinModelPortal:C7FZX3
EnsemblProtists:DDB0252725 GeneID:8616962 KEGG:ddi:DDB_G0295761
Uniprot:C7FZX3
Length = 507
Score = 78 (32.5 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 21/80 (26%), Positives = 35/80 (43%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVC--PH 506
+ H V + AFS K ++ G D T+++WD + +GH V V P
Sbjct: 136 MSGHTEAVLNCAFSPDGKGF--VSVGGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWSPD 193
Query: 507 HKENIQFIFSTALDGKIKAW 526
K+ I + ++G I+ W
Sbjct: 194 SKK----IATAGMEGDIRIW 209
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 19/75 (25%), Positives = 40/75 (53%)
Query: 576 RFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILAT 635
R ++ D +I+ WD +S + L S+ G + +++ +G L+ + D +++ T
Sbjct: 244 RLASSSKDSTIRIWDTESCKNLMSLS--GHTMSVTCLKWGGEG-LIYSGSQDRTVRVFNT 300
Query: 636 SDGIRLLRTFENLAY 650
+DG RL+R + A+
Sbjct: 301 TDG-RLVRVLDGHAH 314
Score = 72 (30.4 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 13/60 (21%), Positives = 34/60 (56%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D+ + G DS+++I++++ +++ +L GH+ + + +S + + S D L +W+
Sbjct: 447 DSRYLVSGSKDSTLKIWDIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKDRLLRIWT 506
Score = 70 (29.7 bits), Expect = 0.00019, Sum P(4) = 0.00019
Identities = 21/70 (30%), Positives = 35/70 (50%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVK-SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSD 920
I+ G DD ++ ++N V + S+L GH + I ++FS S+ D + +W D
Sbjct: 365 ILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASFDKSIKLW--D 422
Query: 921 GWEKQKNRFL 930
G Q +FL
Sbjct: 423 G---QSGKFL 429
Score = 39 (18.8 bits), Expect = 0.00012, Sum P(4) = 0.00012
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 329 FSTPEDLPKTVTRTLNQGSSPMSMD 353
FS PE +P TV + S S++
Sbjct: 18 FSKPEYIPTTVGEAIKLESQEPSLN 42
Score = 38 (18.4 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 153 NLKNSRLRTLINQSLNWQHQL 173
N+ +L+ LIN LN QL
Sbjct: 66 NVTTEQLQMLINSLLNNDEQL 86
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 104 (41.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 35/130 (26%), Positives = 57/130 (43%)
Query: 399 LQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVND 458
L +V+ +V +S DG + +Q++ G+++ LEI AH V
Sbjct: 608 LSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKL---LEIKAHEDEVLC 664
Query: 459 IAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQ-FIFST 517
AFS +K + TC DK +K+W++ G I++ H V C H N + +T
Sbjct: 665 CAFSADDK--FIATCSVDKKVKIWNSMTGELVRIYDEHSEQVN--CCHFTNNSNHLLLAT 720
Query: 518 AL-DGKIKAW 526
D +K W
Sbjct: 721 GSNDYFLKLW 730
Score = 83 (34.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGW 922
+A G +D +IQI + + + GH + + F+ L+SS DS + +W+ W
Sbjct: 978 LAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLISSSDDSAVQIWN---W 1034
Query: 923 EKQKNRFLQ 931
+ + FLQ
Sbjct: 1035 QSEDPFFLQ 1043
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 110 (43.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 425 VAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDA 484
VA +Q++ Y G + + + H G V + F HP + + V + GDD TIKVW
Sbjct: 28 VALFSSTIQLWDYRMGTLLHR---FEDHEGPVRGLDF-HPTQPIFV-SAGDDYTIKVWSL 82
Query: 485 TNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
Y GH V +V H+E + +I S + D I+ W + N
Sbjct: 83 DTNKCLYTLTGHLDYVRTVF-FHRE-LPWIISASDDQTIRIWNWQN 126
Score = 76 (31.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 882 VKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQKNRFLQIPTGRTPTAQ 941
VK L+GH++ + +F L ++VS D Q+ +W + ++ T R T
Sbjct: 201 VKFILEGHTRGVNWASFHPTLPLIVSGSDDRQVKLWRMSA-----TKAWEVDTCRGHTNN 255
Query: 942 SDTRVQFHQDQIHFLVVHETQ-LAIFETTKLECVKQWVPRES 982
D+ V FH Q + V E + L +++ K VKQ+ RE+
Sbjct: 256 VDS-VIFHPHQNLIISVGEDKTLRVWDLDKRTPVKQF-KREN 295
Score = 75 (31.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 15/61 (24%), Positives = 29/61 (47%)
Query: 862 IIAIGMDDSSIQIYNVRVDEV--KSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSS 919
+I G DD ++++ + + +GH+ + + F N+++S G D L VW
Sbjct: 223 LIVSGSDDRQVKLWRMSATKAWEVDTCRGHTNNVDSVIFHPHQNLIISVGEDKTLRVWDL 282
Query: 920 D 920
D
Sbjct: 283 D 283
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 84 (34.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 25/110 (22%), Positives = 42/110 (38%)
Query: 809 VPCFALSKNDSYVMSASGGKIS-LFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGM 867
V C N +YV++ S K L++ P D + +A
Sbjct: 466 VDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAP-DGHTMASAD 524
Query: 868 DDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ I ++++ ++GH I L+FS VLVS G+D + W
Sbjct: 525 SEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAW 574
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 21/104 (20%), Positives = 46/104 (44%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDE-VRQHLEID---------AHVGGVNDI 459
++N +SPD ++ + ++++S + + + ++ +H G V
Sbjct: 326 NMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGT 385
Query: 460 AFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV 503
FS NK L ++C +D + ++W ++GH PV+ V
Sbjct: 386 TFSPDNKYL--LSCSEDASARLWSVDTKTALVAYKGHTGPVWDV 427
Score = 60 (26.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 24/102 (23%), Positives = 42/102 (41%)
Query: 101 KEITQLLTLENFRENEQLSKYGDTKSARSIMLVELKKLIEANPL---FRDKLQFPNLKNS 157
KE+ +++ ++ E E + D + +L E +KL E N RD + P K
Sbjct: 231 KEMEKIVEMD--LEEEDMMHQNDPNNQSPKLLKEFRKLHEPNAEDAPSRDYIPLPPHKGV 288
Query: 158 RLRTLINQSLNWQHQLCKNPRPN-PDIKTLFVDHTCGQPNGA 198
+ + + +W +L PR + P + HT N A
Sbjct: 289 DILSEVEAVKDWSKRLHLGPRASLPSVCMYTFHHTNNNMNCA 330
>UNIPROTKB|Q8IU52 [details] [associations]
symbol:TUWD12 "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 HOVERGEN:HBG057502
UniGene:Hs.604487 HGNC:HGNC:30836 HSSP:Q02793 EMBL:AB053266
EMBL:AB053276 IPI:IPI00796655 SMR:Q8IU52 STRING:Q8IU52
Ensembl:ENST00000393179 Uniprot:Q8IU52
Length = 348
Score = 126 (49.4 bits), Expect = 0.00015, P = 0.00015
Identities = 34/115 (29%), Positives = 57/115 (49%)
Query: 412 NRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVI 471
N V ++P G+ A S V+++ +++ QH ++ H GGVN I+F HP+ +I
Sbjct: 60 NFVDFNPSGTCIASAGSDQTVKVWDVRV-NKLLQHYQV--HSGGVNCISF-HPSGNY-LI 114
Query: 472 TCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
T D T+K+ D G Y +GH PV++V + + S D ++ W
Sbjct: 115 TASSDGTLKILDLLEGRLIYTLQGHTGPVFTVS--FSKGGELFASGGADTQVLLW 167
Score = 85 (35.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H V FS P+ +L +++C +DKTIK+WD TN KQ + ++ ++ +
Sbjct: 13 HTHWVRCAKFS-PDGRL-IVSCSEDKTIKIWDTTN--KQCVNNFSDSVGFANFVDFNPSG 68
Query: 512 QFIFSTALDGKIKAW 526
I S D +K W
Sbjct: 69 TCIASAGSDQTVKVW 83
Score = 81 (33.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP N +I D +++I ++ + L+GH+ + ++FS + S GAD+Q+
Sbjct: 107 HPSGNYLITAS-SDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVL 165
Query: 916 VWSSD 920
+W ++
Sbjct: 166 LWRTN 170
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 118 (46.6 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 50/175 (28%), Positives = 74/175 (42%)
Query: 403 LVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGG---VNDI 459
LV D V R +S DG +R QI+ G V + G + +
Sbjct: 266 LVHDSVVCCVR--FSRDGKYLATGCNRS-AQIFDVTLGQNVAVLQDESVDKSGDLYIRSV 322
Query: 460 AFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTAL 519
FS K L T +DK I+VWD ++IF GHE +YS+ N ++I S +
Sbjct: 323 CFSPDGKYLA--TGAEDKQIRVWDIATRTIKHIFSGHEQDIYSL--DFAGNGRYIASGSG 378
Query: 520 DGKIKAWLYDNLGSRVDYEAPGR-WCTTMAYSADGTRTYQGFRKRSLGVVQFDTT 573
D ++ W D ++ Y TT+A S DG G +++ V +DTT
Sbjct: 379 DKTVRLW--DIAEGKLVYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRV--WDTT 429
Score = 60 (26.2 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/59 (20%), Positives = 25/59 (42%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D + + G D +Q ++ + L+GH + +A S N+ + D + +W
Sbjct: 508 DGHWVMSGSKDRGVQFWDPITGNAQMMLQGHKNSVISVAPSPTGNLFATGSGDMRARIW 566
>WB|WBGene00021074 [details] [associations]
symbol:W07E6.2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003
GeneTree:ENSGT00690000102167 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 OMA:HFTCKGH InterPro:IPR012972
Pfam:PF08154 EMBL:FO081752 PIR:T33805 RefSeq:NP_493745.1
ProteinModelPortal:Q9TYV3 SMR:Q9TYV3 STRING:Q9TYV3 PaxDb:Q9TYV3
EnsemblMetazoa:W07E6.2.1 EnsemblMetazoa:W07E6.2.2 GeneID:173439
KEGG:cel:CELE_W07E6.2 UCSC:W07E6.2 CTD:173439 WormBase:W07E6.2
InParanoid:Q9TYV3 NextBio:879659 Uniprot:Q9TYV3
Length = 473
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 76/360 (21%), Positives = 139/360 (38%)
Query: 385 RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVR 444
+ ++WD+ +PL K V + WSPD + A + I++ G+++
Sbjct: 127 QTMRIWDI-ELELPLHTC--KSHKSWVLCIAWSPDATKIASACKNGEICIWNAKTGEQIG 183
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQ-LC--VITCGDDKTIKVWDATNGAKQYIFEGHEAPVY 501
+ L+ H + +A+ +K C + +CG D I +WD G GH A V
Sbjct: 184 KTLK--RHKQWITSLAWQPMHKDPTCRLLASCGKDGNIFIWDTVQGTVVRCLSGHTASV- 240
Query: 502 SVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSAD-GTRT--YQ 558
+ E + I+S + D +K W D+ + W T+A + D RT ++
Sbjct: 241 TCLRWGGEGL--IYSGSQDRTVKMWRADDGVMCRNMTGHAHWINTLALNTDYALRTSCFE 298
Query: 559 GFRK----------RSLGVVQFDTTKN-----RFLAAGDDFSIKFWDMDSVQLLTSIDA- 602
++ + + +++ R ++ DDF++ W+ + SI+
Sbjct: 299 PSKRCIKPDTVEECQKVAQTRYEAALEIAGGERLVSGSDDFTLFMWNPKETK--QSINRM 356
Query: 603 DGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRL--LRTFENLAYDASRTSENSK 660
G + ++ F+ D +A ++ D +K+ G L LR Y + S +S+
Sbjct: 357 TGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVA-WSADSR 415
Query: 661 PTISPIXXXXXXXXXXXXXXXXXXXMVSIPGMNGDVRSLADVKPRITEE-SNDKSKVWKL 719
+S +PG +GD D P T+ S K KV KL
Sbjct: 416 LLVS----GSADSTLKVFELKTKSLYYDLPG-HGDEVFTVDWSPEGTKVVSGGKDKVLKL 470
>UNIPROTKB|O60336 [details] [associations]
symbol:MAPKBP1 "Mitogen-activated protein kinase-binding
protein 1" species:9606 "Homo sapiens" [GO:0007256 "activation of
JNKK activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 EMBL:CH471125 GO:GO:0007256 EMBL:AB177850
EMBL:AB011168 EMBL:AK292414 EMBL:AL833267 EMBL:AC020659
EMBL:AC073657 EMBL:BC036660 EMBL:BC113983 EMBL:BC114493
IPI:IPI00167154 IPI:IPI00479587 IPI:IPI00782945 IPI:IPI00783044
IPI:IPI00943806 IPI:IPI00963846 PIR:T00270 RefSeq:NP_001122080.1
RefSeq:NP_001252540.1 RefSeq:NP_055809.2 UniGene:Hs.513661
ProteinModelPortal:O60336 SMR:O60336 IntAct:O60336
MINT:MINT-2870106 STRING:O60336 PhosphoSite:O60336 PaxDb:O60336
PRIDE:O60336 Ensembl:ENST00000456763 Ensembl:ENST00000457542
Ensembl:ENST00000514566 GeneID:23005 KEGG:hsa:23005 UCSC:uc001zoj.4
UCSC:uc001zok.4 UCSC:uc010bci.3 UCSC:uc010bck.3 UCSC:uc010bcl.3
CTD:23005 GeneCards:GC15P042067 H-InvDB:HIX0022002 HGNC:HGNC:29536
HPA:HPA030832 neXtProt:NX_O60336 PharmGKB:PA142671479
HOVERGEN:HBG108669 InParanoid:O60336 OMA:EDGIVYP ChiTaRS:MAPKBP1
GenomeRNAi:23005 NextBio:43917 ArrayExpress:O60336 Bgee:O60336
CleanEx:HS_MAPKBP1 Genevestigator:O60336 Uniprot:O60336
Length = 1514
Score = 87 (35.7 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 21/72 (29%), Positives = 37/72 (51%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW--SSD 920
IA D ++ I++ E + + GHS+ +TG+ FS+ L+S DS + VW SS+
Sbjct: 676 IATSCSDKNLSIFDFSSGECVATMFGHSEIVTGMKFSNDCKHLISVSGDSCIFVWRLSSE 735
Query: 921 GWEKQKNRFLQI 932
+ R ++
Sbjct: 736 MTISMRQRLAEL 747
Score = 78 (32.5 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 31/132 (23%), Positives = 53/132 (40%)
Query: 410 SVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
++ + +SPDG S H+ + + + Q E+ H GV +AFS K +
Sbjct: 92 TITALAFSPDGKYLVTGESGHMPAVRVWDVAEH-SQVAELQEHKYGVACVAFSPSAKYIV 150
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LY 528
+ D + VW K + ++ E+ + F TA + IK W L
Sbjct: 151 SVGYQHDMIVNVWA---WKKNIVVASNKVSSRVTAVSFSEDCSY-FVTAGNRHIKFWYLD 206
Query: 529 DNLGSRVDYEAP 540
D+ S+V+ P
Sbjct: 207 DSKTSKVNATVP 218
Score = 68 (29.0 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 1012 AANLKL-RCRINP-SAYLPAGVSSSN----------VHPLVIAAHPQEPNEFALGLSDGG 1059
AA++ L RCR+NP S++ P V++++ VH LV PQE +E +L G
Sbjct: 1163 AASVLLPRCRLNPDSSWAPKRVATASPFSGLQKAQSVHSLV----PQERHEASLQAPSPG 1218
Query: 1060 VHVFEPLESEGKWGVPPPVD 1079
+ +E++ G PP D
Sbjct: 1219 ALLSREIEAQDGLGSLPPAD 1238
Score = 48 (22.0 bits), Expect = 0.00016, Sum P(4) = 0.00016
Identities = 12/47 (25%), Positives = 23/47 (48%)
Query: 621 LAVSTNDNGIKILATSDGIRLLRTFE-NLAYDASRTSENSKPTISPI 666
L S D G+K+LA++ RL+ + Y +T + +I+ +
Sbjct: 527 LEYSKPDTGLKLLASASRDRLIHVLDAGREYSLQQTLDEHSSSITAV 573
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 118 (46.6 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 40/152 (26%), Positives = 65/152 (42%)
Query: 411 VNRVIWSPDGSLFGVAYSRH-IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
V V+ S DG F ++ S ++++ G+ R+ + H V +AFS N+Q
Sbjct: 66 VEDVVLSSDGQ-FALSGSWDGELRLWDLATGETTRRFV---GHTKDVLSVAFSTDNRQ-- 119
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN--IQFIFSTALDGKIKAWL 527
+++ D+TIK+W+ K I EG + C N + I S + D +K W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 528 YDNLGSRVDYEAPGRWCTTMAYSADGTRTYQG 559
N R + T+A S DG+ G
Sbjct: 180 LQNCKLRNSLVGHSGYLNTVAVSPDGSLCASG 211
Score = 52 (23.4 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 575 NRF-LAAGDDFSIKFWDMDSVQLLTSIDAD 603
NR+ L A + SI+ WD++S ++ + D
Sbjct: 245 NRYWLCAATENSIRIWDLESKSVVEDLKVD 274
>POMBASE|SPBC428.19c [details] [associations]
symbol:utp15 "U3 snoRNP protein Utp15 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0030490 "maturation of SSU-rRNA" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] [GO:0034455 "t-UTP
complex" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR018983 Pfam:PF00400 Pfam:PF09384
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 PomBase:SPBC428.19c
GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GenomeReviews:CU329671_GR HSSP:P16649 GO:GO:0032040 GO:GO:0030490
GO:GO:0034455 HOGENOM:HOG000185028 KO:K14549 OMA:QFEGHTK PIR:T40471
RefSeq:NP_595197.1 ProteinModelPortal:O94365 STRING:O94365
EnsemblFungi:SPBC428.19c.1 GeneID:2540858 KEGG:spo:SPBC428.19c
OrthoDB:EOG4TB7KP NextBio:20801974 Uniprot:O94365
Length = 494
Score = 110 (43.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/136 (30%), Positives = 57/136 (41%)
Query: 393 GACSMPLQAALV--KDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEID 450
GA S ++ + KD S N DG L + +VQI+ +R +D
Sbjct: 67 GASSRSVKKTIARFKDTAYSGNI---RKDGKLLLAGDATGLVQIFDLSTRSILRA---LD 120
Query: 451 AHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN 510
AH V+ F P ++ DDKT+KVWD + GA QY GHE V +
Sbjct: 121 AHQFPVHVTQFC-PYANTTFLSGSDDKTVKVWDLSTGAVQYDLSGHEDYVRTASWMSATR 179
Query: 511 IQFIFSTALDGKIKAW 526
+ S DG I+ W
Sbjct: 180 L---VSGGYDGTIRLW 192
Score = 66 (28.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 857 PQDNNIIAIGMDDSSIQIYNV---RVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQ 913
P + I SI+++++ R K KL H K IT LA + L+S G D
Sbjct: 215 PMQSGSTVISAGGPSIKVWDLVAGRQTPTK-KLSNHQKSITCLAMNSENTRLLSGGLDGH 273
Query: 914 LCVWSSDGWE 923
+ +++ W+
Sbjct: 274 VKIYNISDWK 283
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 801 TDSNPEEAVPCFALSKN-DSYVMSASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQD 859
T + P S N ++ S+S GKI ++N P +
Sbjct: 21 TINEPSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIVYSPIN 80
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW-- 917
+NI+A DD +I+++N+ L+ H+ IT L F+ N+L+S +D + +W
Sbjct: 81 SNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETITIWDI 140
Query: 918 SSDG 921
+S+G
Sbjct: 141 TSNG 144
>POMBASE|SPBC8D2.20c [details] [associations]
symbol:sec31 "COPII-coated vesicle component Sec31
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IMP] [GO:0006998
"nuclear envelope organization" evidence=IMP] [GO:0030127 "COPII
vesicle coat" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC8D2.20c GO:GO:0005829 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006998 GO:GO:0006888 GO:GO:0030127
EMBL:AB004537 eggNOG:NOG248389 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OMA:NQPPPMM OrthoDB:EOG4RR9RS PIR:T40765
RefSeq:NP_595582.1 ProteinModelPortal:O13637 STRING:O13637
EnsemblFungi:SPBC8D2.20c.1 GeneID:2541273 KEGG:spo:SPBC8D2.20c
NextBio:20802385 Uniprot:O13637
Length = 1224
Score = 138 (53.6 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 66/281 (23%), Positives = 106/281 (37%)
Query: 279 NPSVDYPSGDSDHLSKRTRPIGISDEINLPVNVLPVSFT-GXXXXXXXXQAFSTPEDLPK 337
NP P G D + R + ++ P+ V+ S G + E
Sbjct: 50 NPESQKPVGSID-VKTRFYDLAWEKSLDKPMGVIAGSLEDGGIGFWDPAAILKSDEASAS 108
Query: 338 TVTRTLNQGSSPMSMDFHPVQQTLLLVGTNVGDIGLWEVGSRER-LVL-RNFKVWDLGAC 395
T GS +DF+ +Q LL G N GD+ +W++ ++ L + + ++
Sbjct: 109 IATYKSENGSILGPLDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFALPKQNRSSEVHVV 168
Query: 396 SMPLQAALVKDPGVSVN-RVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVG 454
S + + + G + +W V R ++ + SY G V A G
Sbjct: 169 SWNNKVSHILASGNATEYTTVWD-------VKLKRQVLNL-SYLGAAGV------SAATG 214
Query: 455 GVNDIAFSHPNKQLCVITCGDDKT---IKVWDATNGA-KQYIFEGHEAPVYSV--CPHHK 508
VN IA+ HPN + T DD I WD Q I GH+ S+ CP
Sbjct: 215 AVNSIAW-HPNNATRLATAIDDNRNPIILTWDLRQPTVPQNILTGHQKAALSLSWCP--- 270
Query: 509 ENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAY 549
E+ F+ S+ DG+ W + S + G W T ++
Sbjct: 271 EDPTFLLSSGKDGRAMVWNVETGESLGSFPRSGNWYTKSSW 311
Score = 50 (22.7 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 25/87 (28%), Positives = 37/87 (42%)
Query: 1009 VFSAANLKLRCRINPS-AYLPAGVSSSNVHPLVIAAHPQEPNEFALGLSDGGVHVFEPLE 1067
V +A+ + + PS Y P V+SS V+P AH +P+ GG + P +
Sbjct: 966 VAAASRISSSPNMPPSNPYTPIAVASSTVNP----AHTYKPH--------GGSQIVPPPK 1013
Query: 1068 SEGKWGVP-PPVDNGSTSSM-PATPPV 1092
VP PP + S+ P T V
Sbjct: 1014 QPANRVVPLPPTASQRASAYEPPTVSV 1040
Score = 43 (20.2 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 686 MVSIPGMNGDVRSLADVKPRITEESNDKSKVWKLTELSEPN 726
++S G D S ++ P TE K ++ +LT L EP+
Sbjct: 758 ILSASGKFDDAMSYLNLVP--TEFPGAKEEIQRLTMLLEPH 796
>ASPGD|ASPL0000005121 [details] [associations]
symbol:nudF species:162425 "Emericella nidulans"
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0008017
"microtubule binding" evidence=IDA] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0048315 "conidium formation" evidence=IMP]
[GO:0043935 "sexual sporulation resulting in formation of a
cellular spore" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005881 "cytoplasmic microtubule" evidence=IEA] [GO:0051010
"microtubule plus-end binding" evidence=IEA] [GO:2000574
"regulation of microtubule motor activity" evidence=IMP]
[GO:0030473 "nuclear migration along microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005737
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301 GO:GO:0000922
GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 110 (43.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 51/218 (23%), Positives = 93/218 (42%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNG-AKQ 490
++I+ + G E+ + L+ H+ GV+ + + + +C D TIK+WD + A
Sbjct: 138 IKIWDWELG-EIERTLK--GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANI 194
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LYDNLGSRVDYEAPGRWCTTMAY 549
GH+ V SV N + S + DG ++ W + +V A W ++
Sbjct: 195 RTLSGHDHSVSSV-RFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSP 253
Query: 550 SADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIK---FWDMDSVQLLTSIDADGGL 606
S DG G R +++ V + + + + G + I+ F S + L ++ GL
Sbjct: 254 SFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATL---AGL 310
Query: 607 PASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
P + + +A D IK L + G RL++T
Sbjct: 311 KKPPPATSSCE--FVATGARDKTIK-LWEARG-RLIKT 344
Score = 64 (27.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW--SSD 920
+A G D +I+++ R +K+ L GH + GL F L S D + W S +
Sbjct: 323 VATGARDKTIKLWEARGRLIKT-LHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQE 381
Query: 921 G 921
G
Sbjct: 382 G 382
>UNIPROTKB|Q00664 [details] [associations]
symbol:nudF "Nuclear distribution protein nudF"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
GO:GO:0000922 GO:GO:0005874 EMBL:AACD01000105 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:U22009
RefSeq:XP_663801.1 ProteinModelPortal:Q00664 IntAct:Q00664
STRING:Q00664 EnsemblFungi:CADANIAT00006811 GeneID:2870783
KEGG:ani:AN6197.2 OrthoDB:EOG4SR15V Uniprot:Q00664
Length = 444
Score = 110 (43.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 51/218 (23%), Positives = 93/218 (42%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNG-AKQ 490
++I+ + G E+ + L+ H+ GV+ + + + +C D TIK+WD + A
Sbjct: 138 IKIWDWELG-EIERTLK--GHIRGVSGLDYGGQKGNTLLASCSSDLTIKLWDPSKDYANI 194
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LYDNLGSRVDYEAPGRWCTTMAY 549
GH+ V SV N + S + DG ++ W + +V A W ++
Sbjct: 195 RTLSGHDHSVSSV-RFLTSNDNHLISASRDGTLRIWDVSTGFCVKVIKSATESWIRDVSP 253
Query: 550 SADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIK---FWDMDSVQLLTSIDADGGL 606
S DG G R +++ V + + + + G + I+ F S + L ++ GL
Sbjct: 254 SFDGKWLVSGGRDQAITVWEVSSAEPKAALLGHENFIECCVFAPPASYEHLATL---AGL 310
Query: 607 PASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLLRT 644
P + + +A D IK L + G RL++T
Sbjct: 311 KKPPPATSSCE--FVATGARDKTIK-LWEARG-RLIKT 344
Score = 64 (27.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW--SSD 920
+A G D +I+++ R +K+ L GH + GL F L S D + W S +
Sbjct: 323 VATGARDKTIKLWEARGRLIKT-LHGHDNWVRGLVFHPGGKYLFSVSDDKTIRCWDLSQE 381
Query: 921 G 921
G
Sbjct: 382 G 382
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 69/286 (24%), Positives = 115/286 (40%)
Query: 393 GACSMPLQAALVKDPGVSVNRVIWSP--DGSLFGVAYSRHIVQ--IYSYHGGDEVRQHLE 448
G CS L+ K G ++ W+P +G L + + I I + D L
Sbjct: 162 GKCSPNLKLTGHKKEGYGIS---WNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALN 218
Query: 449 I-DAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQ-YIFEGHEAPVYSVCPH 506
I + H V D+A+ H + GDDK + +WD G K ++ E H + V C
Sbjct: 219 IYNGHTSIVEDVAW-HYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVN--CLS 275
Query: 507 HKENIQFIFST-ALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSL 565
+F+ +T + D + W NLG+R+ + ++++ + +Q
Sbjct: 276 FNPFCEFLVATGSTDKTVALWDMRNLGNRLH--------SLISHTDE---VFQ------- 317
Query: 566 GVVQFDTTKNRFLAA-GDDFSIKFWDMDSV-QLLTSIDADGGLPASPRIRFNKDGCLLAV 623
VQF LA+ G D + WD+ + + + DA G P I +
Sbjct: 318 --VQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHGGHTSKISDF 375
Query: 624 STNDN---GIKILATSDGIRLLRTFENLAYDASRTSENSKPTISPI 666
S N N I +A + +++ + EN+ D ENSK T + I
Sbjct: 376 SWNPNDPWSIASVAEDNILQIWQMAENIYNDREDDLENSKVTNAQI 421
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 102 (41.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 63/295 (21%), Positives = 117/295 (39%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
++WD PL +K V V +SP+G++ + V+I+ G + L
Sbjct: 174 RIWDCDT-GTPLHT--LKGHTSWVLAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPL 230
Query: 448 EIDAHVGGVNDIAFSHPNKQLC----VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV 503
+ HV + +A+ + Q + + D T+++WD + + GH+ V
Sbjct: 231 K--GHVKWITSLAWEPYHLQQSGHPRLASASKDSTVRIWDVISKRADIVLSGHKGSV--T 286
Query: 504 CPHHKENIQFIFSTALDGKIKAW------LYDNLGS---RVDYEAPGR-WCTTMAY-SAD 552
C + I++++ D IK W L L + RV++ A + AY
Sbjct: 287 CVRWGGTGK-IYTSSHDRTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHT 345
Query: 553 GTRTYQGFRKRSLGVVQFD---TTKNRFL----AAGDDFSIKFWDMDSVQLLTSIDADGG 605
G K ++ +F+ T N+ + +A DDF++ WD +S + G
Sbjct: 346 GKVPESDADKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVA-RLLGH 404
Query: 606 LPASPRIRFNKDGCLLAVSTNDNGIKILATSDG--IRLLRTFENLAYDASRTSEN 658
+ F+ D +A + DN +K+ DG I LR Y ++++
Sbjct: 405 QKEVNHVTFSPDMAYIASAGFDNHVKLWNGRDGKFITTLRGHVGAVYQCCFSADS 459
Score = 74 (31.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D+ ++ D++++++NVR ++ L GH + + +S + S G D + +W
Sbjct: 458 DSRLLVSSSKDTTLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKVGSGGKDKAIRIW 516
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 116 (45.9 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 35/103 (33%), Positives = 52/103 (50%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNG-AKQ 490
+++Y+Y+ D+++ +AH + +A HP V++ DD IK+WD G
Sbjct: 296 IRVYNYNTMDKIKV---FEAHADYIRCVAV-HPTLPY-VLSSSDDMLIKLWDWEKGWLCT 350
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGS 533
IFEGH V V + K+ F S +LD IK W NLGS
Sbjct: 351 QIFEGHSHYVMQVTFNPKDTNTFA-SASLDRTIKIW---NLGS 389
Score = 75 (31.5 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 11/59 (18%), Positives = 30/59 (50%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D + G DD + ++++ + L+GH+ ++ ++F L ++++ D + +W
Sbjct: 413 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 471
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1056 SDGGVHVFEPLESEGKWGVPPP 1077
+DG V V ESE +W + PP
Sbjct: 1113 TDGAVLV-NGNESEEQWVLTPP 1133
>FB|FBgn0011569 [details] [associations]
symbol:can "cannonball" species:7227 "Drosophila
melanogaster" [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007141 "male meiosis I" evidence=IMP] [GO:0048515 "spermatid
differentiation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0005669 "transcription factor TFIID
complex" evidence=ISS] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=ISS]
[GO:0007126 "meiosis" evidence=TAS] [GO:0007286 "spermatid
development" evidence=IMP;TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0001673
"male germ cell nucleus" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007286 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001673 GO:GO:0006367 GO:GO:0010468
GO:GO:0007141 HSSP:P16649 GO:GO:0005669
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:AF346730
RefSeq:NP_524827.1 UniGene:Dm.1796 SMR:Q9VT91 IntAct:Q9VT91
MINT:MINT-834439 STRING:Q9VT91 EnsemblMetazoa:FBtr0076299
GeneID:45432 KEGG:dme:Dmel_CG6577 UCSC:CG6577-RA CTD:12329
FlyBase:FBgn0011569 InParanoid:Q9VT91 OMA:RIWDIVK OrthoDB:EOG4F4QS8
GenomeRNAi:45432 NextBio:838153 Uniprot:Q9VT91
Length = 942
Score = 94 (38.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKL-KGHSKRITGLAFSHALNVLVSSGADSQL 914
HP + + +A G D +++I+++ V V+ ++ +GH RIT L +S LVS G D+ +
Sbjct: 719 HP-NRHYMATGSADCTVRIWDI-VKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLI 776
Query: 915 CVWSS 919
+W +
Sbjct: 777 MIWDT 781
Score = 88 (36.0 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 25/80 (31%), Positives = 41/80 (51%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENI 511
H G V +F+ ++ L ITC +D ++++W + + IF GH APV V +
Sbjct: 625 HQGPVYGCSFNPEDRFL--ITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRG-- 680
Query: 512 QFIFSTALDG-KIKAWLYDN 530
+ F+TA D + W+ DN
Sbjct: 681 -YYFATASDDCTARVWMQDN 699
>CGD|CAL0000105 [details] [associations]
symbol:orf19.1672 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR010714
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053 Pfam:PF06957
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0000105
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACQ01000013 GO:GO:0030126 KO:K05236
InterPro:IPR016391 PIRSF:PIRSF003354 RefSeq:XP_721749.1
ProteinModelPortal:Q5AJP8 STRING:Q5AJP8 GeneID:3636601
KEGG:cal:CaO19.1672 Uniprot:Q5AJP8
Length = 1221
Score = 111 (44.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 33/130 (25%), Positives = 60/130 (46%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V V + P LF + ++++S + + ++ H+ + ++F H +
Sbjct: 56 VRSVDFHPTQPLFVSGGDDYTIKVWSLNTRKCI---FTLNGHLDYIRGVSFHHDLPW--I 110
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
I+C DD+TI++W+ N + GH V S H E++ I S +LD ++ W D
Sbjct: 111 ISCSDDQTIRIWNWQNRQEIACLTGHNHYVMSAQFHPSEDL--IVSASLDQTVRVW--DI 166
Query: 531 LGSRVDYEAP 540
G R + AP
Sbjct: 167 SGLRKKHSAP 176
Score = 73 (30.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 41/135 (30%), Positives = 58/135 (42%)
Query: 882 VKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS-SD--GWEKQKNRFLQIPTGRTP 938
VK L+GH K + +F L ++VS+G D + +W SD WE R G T
Sbjct: 205 VKYVLEGHDKGVNYASFHPTLPLIVSAGDDRVVKLWRMSDTKAWEVDTCR------GHTG 258
Query: 939 TAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWVPRESSA---PITHATFSCDS 995
S HQD I V + + +++ K VKQ+ RE +H T S
Sbjct: 259 NVLSAI-FHPHQDLI-LSVSDDKTIRVWDLNKRVPVKQF-RREHDRFWLIASHPTIS--- 312
Query: 996 QLVYACFLDATVCVF 1010
L AC D+ + VF
Sbjct: 313 -LFAACH-DSGIMVF 325
>WB|WBGene00009542 [details] [associations]
symbol:F38E11.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA;IMP]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0048599 "oocyte development" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0032940 GO:GO:0030117
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048599
HOGENOM:HOG000163444 InterPro:IPR016453 PIRSF:PIRSF005567
EMBL:Z68342 PIR:T21970 RefSeq:NP_501671.1 ProteinModelPortal:Q20168
SMR:Q20168 IntAct:Q20168 STRING:Q20168 PaxDb:Q20168 PRIDE:Q20168
EnsemblMetazoa:F38E11.5 GeneID:177779 KEGG:cel:CELE_F38E11.5
UCSC:F38E11.5 CTD:177779 WormBase:F38E11.5
GeneTree:ENSGT00640000091529 InParanoid:Q20168 OMA:LRNKAFG
NextBio:898348 GO:GO:0030663 Uniprot:Q20168
Length = 1000
Score = 108 (43.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/127 (25%), Positives = 57/127 (44%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNG-AKQ 490
+++++Y+ + V Q +AH + + HP VI+ DD +K+WD N A +
Sbjct: 81 IRVFNYNTLERVHQ---FEAHSDYLRSLVV-HPTLPY-VISSSDDMLVKMWDWDNKWAMK 135
Query: 491 YIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
FEGH V + + K+N F + +LD +K W + + E + + Y
Sbjct: 136 QSFEGHTHYVMQIAINPKDNNTFA-TASLDKTVKVWQFGSNVPNFTLEGHEKGVNCVDYY 194
Query: 551 ADGTRTY 557
G + Y
Sbjct: 195 HGGEKPY 201
Score = 74 (31.1 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 14/65 (21%), Positives = 33/65 (50%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
H + I G DD ++I++ + L GH++ ++ + F L ++++ DS +
Sbjct: 195 HGGEKPYIISGADDHLVKIWDYQNKTCVQTLDGHAQNVSSVCFHPELPLIITGSEDSTVR 254
Query: 916 VWSSD 920
+W ++
Sbjct: 255 LWHAN 259
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 107 (42.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 40/168 (23%), Positives = 69/168 (41%)
Query: 420 GSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTI 479
G+LF R V+++ + G ++ + +G + D+A +H NK VI +
Sbjct: 238 GTLFTGGQDR-AVKMWDTNSGTLIKS---LYGSLGNILDMAVTHDNKS--VIAATSSNNL 291
Query: 480 KVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW-LYDNLGSRVDYE 538
VWD ++G ++ GH V +V K + + + S A D IK W L+ +
Sbjct: 292 FVWDVSSGRVRHTLTGHTDKVCAV-DVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLF 350
Query: 539 APGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSI 586
C + S DG + G +L + T K AG ++
Sbjct: 351 TSN--CNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAV 396
Score = 68 (29.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 24/137 (17%), Positives = 57/137 (41%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGKI-SLFNXXXXXXXXXXX 844
+LW +G +++ S+ AV +LS+N + ++++ + ++F+
Sbjct: 376 RLWDIQTGKLLSEVAGHSS---AVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLR 432
Query: 845 XXXXXXXXXXXHP---QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHA 901
D++ +A G D S+ ++++ + S LK + I ++S
Sbjct: 433 ASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGI 492
Query: 902 LNVLVSSGADSQLCVWS 918
L S+ + +C W+
Sbjct: 493 GKPLASADKNGYVCTWT 509
>UNIPROTKB|Q8NI36 [details] [associations]
symbol:WDR36 "WD repeat-containing protein 36" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 GO:GO:0050896
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0032040
HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH EMBL:AF385437
EMBL:BC133025 EMBL:BC136517 EMBL:AK095312 IPI:IPI00169325
RefSeq:NP_644810.1 UniGene:Hs.533237 ProteinModelPortal:Q8NI36
SMR:Q8NI36 IntAct:Q8NI36 STRING:Q8NI36 PhosphoSite:Q8NI36
DMDM:46577504 PaxDb:Q8NI36 PeptideAtlas:Q8NI36 PRIDE:Q8NI36
Ensembl:ENST00000506538 Ensembl:ENST00000513710 GeneID:134430
KEGG:hsa:134430 UCSC:uc003kpd.3 CTD:134430 GeneCards:GC05P110427
HGNC:HGNC:30696 HPA:HPA037797 MIM:609669 MIM:609887
neXtProt:NX_Q8NI36 Orphanet:359 PharmGKB:PA134933637
HOVERGEN:HBG059718 InParanoid:Q8NI36 PhylomeDB:Q8NI36
GenomeRNAi:134430 NextBio:83377 ArrayExpress:Q8NI36 Bgee:Q8NI36
CleanEx:HS_WDR36 Genevestigator:Q8NI36 GermOnline:ENSG00000134987
Uniprot:Q8NI36
Length = 951
Score = 89 (36.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+D+ I+ + +DD SI + ++ ++ + GH +I +AFS L+S+ D + W
Sbjct: 590 RDSGILGLALDDFSISVLDIETRKIVREFSGHQGQINDMAFSPDGRWLISAAMDCSIRTW 649
Score = 81 (33.6 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 21/81 (25%), Positives = 44/81 (54%)
Query: 450 DAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVW--DATNGAKQYI-FE-GHEAPVYSVCP 505
+AH + + F H ++ ++T G D +++W D G + + F GH AP+ ++
Sbjct: 330 NAHSTAIAGLTFLH--REPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTNI-R 386
Query: 506 HHKENIQFIFSTALDGKIKAW 526
++ +N Q I S + DG ++++
Sbjct: 387 YYGQNGQQILSASQDGTLQSF 407
Score = 58 (25.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 18/64 (28%), Positives = 30/64 (46%)
Query: 342 TLNQGSSPMSMDFHP-VQQTLLLVGTNVGDIGLWEVGSRERLVLRNFKVWDLGACSMPLQ 400
T ++ +S HP +L+G+ G + LW V S + +L F W +G ++ Q
Sbjct: 199 TFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWNVKSNK--LLYTFPGWKVGVTALQ-Q 255
Query: 401 AALV 404
A V
Sbjct: 256 APAV 259
>RGD|1305789 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10116 "Rattus
norvegicus" [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305789 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00390000009416
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 OrthoDB:EOG4WH8KB
EMBL:AY986483 EMBL:BC085864 IPI:IPI00215349 RefSeq:NP_001014157.1
UniGene:Rn.3168 HSSP:Q11176 ProteinModelPortal:Q5RKI0 STRING:Q5RKI0
PhosphoSite:Q5RKI0 World-2DPAGE:0004:Q5RKI0 PRIDE:Q5RKI0
Ensembl:ENSRNOT00000024012 GeneID:360950 KEGG:rno:360950
InParanoid:Q5RKI0 NextBio:674693 Genevestigator:Q5RKI0
Uniprot:Q5RKI0
Length = 606
Score = 96 (38.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 26/73 (35%), Positives = 39/73 (53%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
VN V +SPDG+ F A + + IY G++V AH GG+ I++S + L
Sbjct: 192 VNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHL-- 249
Query: 471 ITCGDDKTIKVWD 483
++ DKT K+WD
Sbjct: 250 LSASGDKTSKIWD 262
Score = 69 (29.3 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 22/77 (28%), Positives = 39/77 (50%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKS--KLKGHSKRITGLAFSHALNVLVSSGADSQ 913
HP + +A+G D ++++Y++ +K KL +T LA+SH L A
Sbjct: 454 HP-GGDTVAVGGSDGNVRVYSILGATLKDEGKLLEAKGPVTDLAYSHDGAFLAVCDASKV 512
Query: 914 LCVWS-SDGWEKQKNRF 929
+ V+S +DG+ + N F
Sbjct: 513 VTVFSVADGYS-ENNVF 528
Score = 56 (24.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 479 IKVWDATNGAKQY-IFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
I D N +K + +GH + + H +I+S + DG I W
Sbjct: 301 INYLDKNNPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYW 349
>UNIPROTKB|F1PNT8 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032040 "small-subunit processome"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007319
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
GeneTree:ENSGT00390000004976 KO:K14554 OMA:DGIIACH CTD:134430
EMBL:AAEX03001970 RefSeq:XP_545992.2 ProteinModelPortal:F1PNT8
Ensembl:ENSCAFT00000011832 GeneID:488875 KEGG:cfa:488875
Uniprot:F1PNT8
Length = 891
Score = 87 (35.7 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+D+ I+ + +DD SI + ++ ++ + GH +I LAFS L+S+ D + W
Sbjct: 530 RDSGILGLALDDFSICVLDIETRKIVREFSGHQGQINDLAFSPDGRWLISASMDCSVRTW 589
Score = 80 (33.2 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 450 DAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVW--DATNGAKQYI-FE-GHEAPVYSVCP 505
+AH + + F H ++ ++T G D +++W D G + + F GH AP+ +
Sbjct: 270 NAHSTAIAGLTFLH--REPLLVTNGADNALRIWIFDGPTGEGRLLRFRMGHSAPLTKI-R 326
Query: 506 HHKENIQFIFSTALDGKIKAW 526
++ +N Q I S + DG ++++
Sbjct: 327 YYGQNGQQILSASQDGTLQSF 347
Score = 60 (26.2 bits), Expect = 0.00026, Sum P(3) = 0.00026
Identities = 19/76 (25%), Positives = 36/76 (47%)
Query: 342 TLNQGSSPMSMDFHP-VQQTLLLVGTNVGDIGLWEVGSRERLVLRNFKVWDLGACSMPLQ 400
T ++ +S HP +L+G+ G + LW + S + +L F+ W G ++
Sbjct: 139 TFDKSVFKISAILHPSTYLNKILLGSEQGTLQLWNIKSNK--LLYTFQGWKFGVTALQQA 196
Query: 401 AAL-VKDPGVSVNRVI 415
A+ V G++ +VI
Sbjct: 197 PAVDVVAVGLTSGQVI 212
>RGD|708344 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein), beta
polypeptide 3" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0044297 "cell
body" evidence=IDA] [GO:0051020 "GTPase binding" evidence=IEA;ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:708344 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043005 GO:GO:0004871
GO:GO:0044297 PRINTS:PR00319 GeneTree:ENSGT00550000074331
HOGENOM:HOG000176356 HOVERGEN:HBG000188 InterPro:IPR016346
PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C
EMBL:L29090 EMBL:BC086422 IPI:IPI00204239 PIR:I53871
RefSeq:NP_068630.1 UniGene:Rn.27065 ProteinModelPortal:P52287
SMR:P52287 STRING:P52287 PhosphoSite:P52287 PRIDE:P52287
Ensembl:ENSRNOT00000021481 GeneID:60449 KEGG:rno:60449
UCSC:RGD:708344 InParanoid:P52287 NextBio:612200
ArrayExpress:P52287 Genevestigator:P52287
GermOnline:ENSRNOG00000015541 Uniprot:P52287
Length = 340
Score = 103 (41.3 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 32/114 (28%), Positives = 49/114 (42%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGD-EVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
++P G+ ++ IYS + V+ E+ AH G ++ F N ++T
Sbjct: 105 YAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN---IVTSS 161
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYS--VCPHHKENIQFIFSTALDGKIKAW 526
D T +WD G ++ +F GH S V P +K FI S A D K W
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYK---LFI-SGACDASAKLW 211
Score = 63 (27.2 bits), Expect = 0.00066, Sum P(2) = 0.00066
Identities = 18/59 (30%), Positives = 30/59 (50%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSK--RITGLAFSHALNVLVSSGADSQLCVWSS 919
I G DD+S +++++R D+ + S IT +AFS + +L + D VW S
Sbjct: 241 ICTGSDDASCRLFDLRADQELTAYSHESIICGITSVAFSLSGRLLFAGYDDFNCNVWDS 299
Score = 57 (25.1 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGA-DSQLCVWS 918
++ G DD + +++ E L GH R++ L + A + V++G+ DS L +W+
Sbjct: 284 LLFAGYDDFNCNVWDSLKCERVGVLSGHDNRVSCLGVT-ADGMAVATGSWDSFLKIWN 340
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 552 DGT--RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPAS 609
+GT +T+ G + + + F DD S + +D+ + Q LT+ + +
Sbjct: 215 EGTCRQTFTG-HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHESIICGI 273
Query: 610 PRIRFNKDGCLLAVSTND 627
+ F+ G LL +D
Sbjct: 274 TSVAFSLSGRLLFAGYDD 291
>UNIPROTKB|F1SLU8 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 OMA:NMCSIYS EMBL:FP325257
Ensembl:ENSSSCT00000000743 Uniprot:F1SLU8
Length = 340
Score = 101 (40.6 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGD-EVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
++P G+ ++ IYS + V+ E+ AH G ++ F N ++T
Sbjct: 105 YAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN---IVTSS 161
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D T +WD G ++ +F GH S+ + + S A D K W
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAV--SPDFKLFISGACDASAKLW 211
Score = 59 (25.8 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGA-DSQLCVWS 918
++ G DD + +++ E L GH R++ L + A + V++G+ DS L +W+
Sbjct: 284 LLFAGYDDFNCNVWDSMKCERVGTLSGHDNRVSCLGVT-ADGMAVATGSWDSFLKIWN 340
Score = 50 (22.7 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 552 DGT--RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPAS 609
+GT +T+ G + + + F DD S + +D+ + Q LT+ + +
Sbjct: 215 EGTCRQTFTG-HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYSHESIICGI 273
Query: 610 PRIRFNKDGCLLAVSTND 627
+ F+ G LL +D
Sbjct: 274 TSVAFSLSGRLLFAGYDD 291
>UNIPROTKB|Q6RI45 [details] [associations]
symbol:BRWD3 "Bromodomain and WD repeat-containing protein
3" species:9606 "Homo sapiens" [GO:0008360 "regulation of cell
shape" evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
EMBL:AY497046 EMBL:AY497047 EMBL:AY497048 EMBL:AY497049
EMBL:AY497050 EMBL:AY497051 EMBL:AY497052 EMBL:AY497053
EMBL:AY497054 EMBL:AY497055 EMBL:AY497056 EMBL:AY497057
EMBL:AY497058 EMBL:AY497059 EMBL:AY497060 EMBL:AL590031
EMBL:AL512504 EMBL:AL669934 EMBL:BC111490 EMBL:AK095887
IPI:IPI00167547 IPI:IPI00843754 IPI:IPI00844073 IPI:IPI00844236
IPI:IPI00844349 RefSeq:NP_694984.4 UniGene:Hs.147027
UniGene:Hs.613180 HSSP:P16649 ProteinModelPortal:Q6RI45
IntAct:Q6RI45 STRING:Q6RI45 PhosphoSite:Q6RI45 PaxDb:Q6RI45
PRIDE:Q6RI45 Ensembl:ENST00000373275 GeneID:254065 KEGG:hsa:254065
UCSC:uc004edo.3 CTD:254065 GeneCards:GC0XM079926 HGNC:HGNC:17342
HPA:HPA012802 MIM:300553 MIM:300659 neXtProt:NX_Q6RI45 Orphanet:323
PharmGKB:PA134900775 HOVERGEN:HBG108248 InParanoid:Q6RI45
OMA:MTGNNLP OrthoDB:EOG4X3H0H GenomeRNAi:254065 NextBio:92253
Bgee:Q6RI45 CleanEx:HS_BRWD3 Genevestigator:Q6RI45
InterPro:IPR011044 SUPFAM:SSF50969 Uniprot:Q6RI45
Length = 1802
Score = 110 (43.8 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 441 DEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPV 500
D+ R + H ++D+A ++ N + +C DK ++VW A + +GH A +
Sbjct: 210 DDGRLLATLRGHSAEISDMAVNYENTLIAAGSC--DKVVRVWCLRTCAPVAVLQGHSASI 267
Query: 501 YSV--CPHHKENIQFIFSTALDGKIKAW 526
S+ CP K +++ ST DG I W
Sbjct: 268 TSIQFCPSTKGTNRYLTSTGADGTICFW 295
Score = 96 (38.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 25/92 (27%), Positives = 44/92 (47%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAF---SHALN-VLVSSGADSQL 914
+N +IA G D ++++ +R + L+GHS IT + F + N L S+GAD +
Sbjct: 233 ENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTNRYLTSTGADGTI 292
Query: 915 CVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRV 946
C W W + +F P T ++ ++
Sbjct: 293 CFWQ---WHVKTMKFRDRPVKFTERSRPGVQI 321
Score = 91 (37.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 31/123 (25%), Positives = 53/123 (43%)
Query: 404 VKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSH 463
VK P V VN I S L G + HI +Y ++ H I H+ V +AF
Sbjct: 138 VKPPNV-VN--ITSAR-QLTGCSRFGHIFPSSAYQ---HIKMHKRILGHLSSVYCVAFDR 190
Query: 464 PNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKI 523
++ + T DD +K+W +G GH A + + +++ + I + + D +
Sbjct: 191 SGRR--IFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTL--IAAGSCDKVV 246
Query: 524 KAW 526
+ W
Sbjct: 247 RVW 249
Score = 72 (30.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALN--VLVSSGADSQLCV 916
D +I +++ ++++N ++ L GH + L +H + +++S+G D + +
Sbjct: 435 DTTVIT-AVNNFLLKVWNSITGQLLHTLSGHDDEVFVLE-AHPFDQRIILSAGHDGNIFI 492
Query: 917 WSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHF 955
W D K +N F I G+ A D + F D HF
Sbjct: 493 WDLDRGTKIRNYFNMIE-GQGHGAVFDCK--FSPDGNHF 528
>FB|FBgn0260049 [details] [associations]
symbol:flr "flare" species:7227 "Drosophila melanogaster"
[GO:0030042 "actin filament depolymerization" evidence=ISS;IMP]
[GO:0003779 "actin binding" evidence=ISS] [GO:0008154 "actin
polymerization or depolymerization" evidence=ISS] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0035317 "imaginal
disc-derived wing hair organization" evidence=IMP] [GO:0045214
"sarcomere organization" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0003779
GO:GO:0006911 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319 GO:GO:0030042
GO:GO:0045214 GeneTree:ENSGT00390000009416 GO:GO:0001736
GO:GO:0035317 GO:GO:0030834 CTD:797829 OMA:INGIAAW EMBL:AY061340
RefSeq:NP_648642.1 RefSeq:NP_729891.1 UniGene:Dm.1492
ProteinModelPortal:Q9VU68 SMR:Q9VU68 DIP:DIP-18795N IntAct:Q9VU68
MINT:MINT-318098 STRING:Q9VU68 PaxDb:Q9VU68 PRIDE:Q9VU68
EnsemblMetazoa:FBtr0075845 GeneID:39505 KEGG:dme:Dmel_CG10724
UCSC:CG10724-RA FlyBase:FBgn0260049 OrthoDB:EOG4HQC0B
PhylomeDB:Q9VU68 GenomeRNAi:39505 NextBio:813989 Bgee:Q9VU68
GermOnline:CG10724 Uniprot:Q9VU68
Length = 608
Score = 92 (37.4 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 28/87 (32%), Positives = 42/87 (48%)
Query: 398 PLQAALVK-DPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHG-GDEVRQHLEIDAHVGG 455
P + + K D V V +SPDG F A + +++ Y G E+ AH GG
Sbjct: 184 PFKFKMTKQDHSRFVQAVRYSPDGKFF--ASAGFDGKVFLYDGTSSELVGEFGSPAHKGG 241
Query: 456 VNDIAFSHPNKQLCVITCGDDKTIKVW 482
V +A+ + QL +TC DKT ++W
Sbjct: 242 VYALAWKPDSTQL--LTCSGDKTCRLW 266
Score = 78 (32.5 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 17/71 (23%), Positives = 40/71 (56%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLK-GHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D + +A+G DD + IY ++ ++ K++ H +T +++S L LV+ A ++ ++
Sbjct: 457 DTSDVAVGGDDQKLHIYTLKGGVLEPKVELDHLGAVTDVSYSPDLKYLVACDAHRKVVLY 516
Query: 918 SSDGWEKQKNR 928
S + ++ N+
Sbjct: 517 SVEEYKPAHNK 527
Score = 50 (22.7 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 975 KQWVPRESSAPITHATFSCDSQLVYACFLDATVCVFSAAN 1014
K+W SA + +S +S LV + LD T+ ++S AN
Sbjct: 527 KEW--GFHSARVNTVAWSPNSLLVASGSLDTTIIIWSVAN 564
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 180 NPDIKTLFVDHTCGQPNGARAPS 202
NP I ++ +H+C +PS
Sbjct: 53 NPAIADVYTEHSCAVNVAKYSPS 75
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(5) = 0.00030
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 345 QGSSPMSMDFHPVQQTLLLVGTNVGDIGLWE 375
Q S S DF P + ++ G+ I ++E
Sbjct: 151 QSKSINSADFRPARPFRIVTGSEDNTIAVFE 181
Score = 38 (18.4 bits), Expect = 0.00037, Sum P(5) = 0.00037
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 365 GTNVGDIGLWEVGSRERLVLRNFK 388
G G I +W+ ++E L+ F+
Sbjct: 82 GDASGKIRIWDTVNKEHLLKNEFQ 105
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 89 (36.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 27/116 (23%), Positives = 49/116 (42%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
++ + WS D A ++I+ E + L H V + F+ P+ +
Sbjct: 88 ISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLR--GHTNFVFCVNFNPPSN--LI 143
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
++ D+TI++W+ G + + H P+ SV H + I S + DG K W
Sbjct: 144 VSGSFDETIRIWEVKTGKCVRMIKAHSMPISSV--HFNRDGSLIVSASHDGSCKIW 197
Score = 88 (36.0 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 24/95 (25%), Positives = 48/95 (50%)
Query: 568 VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTND 627
V F+ N ++ D +I+ W++ + + + I A +P S + FN+DG L+ +++D
Sbjct: 134 VNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS-MPISS-VHFNRDGSLIVSASHD 191
Query: 628 NGIKILATSDG--IRLLRTFENLAYDASRTSENSK 660
KI +G ++ L ++ A ++ S N K
Sbjct: 192 GSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGK 226
Score = 81 (33.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 25/140 (17%), Positives = 54/140 (38%)
Query: 786 QLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSA---SGGKISLFNXXXXXXXXX 842
++W G + + D +P AV S N +++ A S K+S +
Sbjct: 195 KIWDAKEGTCLKTLIDDKSP--AVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYT 252
Query: 843 XXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
+ I G +D+ + +++++ + +L+GH+ + ++
Sbjct: 253 GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQ 312
Query: 903 NVLVSSG--ADSQLCVWSSD 920
N + SSG D + +W D
Sbjct: 313 NEISSSGNHLDKTIRIWKQD 332
Score = 78 (32.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 19/83 (22%), Positives = 41/83 (49%)
Query: 445 QHLE-IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV 503
+HL+ ++ H ++ + FS+ L + DKT+ +W ATN + + +EGH + + +
Sbjct: 34 RHLKTLEGHTAAISCVKFSNDGNLLA--SASVDKTMILWSATNYSLIHRYEGHSSGISDL 91
Query: 504 CPHHKENIQFIFSTALDGKIKAW 526
+ + S + D ++ W
Sbjct: 92 A--WSSDSHYTCSASDDCTLRIW 112
>MGI|MGI:106247 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0000974 "Prp19 complex"
evidence=ISO] [GO:0001833 "inner cell mass cell proliferation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;ISA;IDA] [GO:0005681 "spliceosomal complex"
evidence=ISA;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IDA] [GO:0045666
"positive regulation of neuron differentiation" evidence=ISA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IMP] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 SMART:SM00504
MGI:MGI:106247 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0005811
GO:GO:0003677 GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045665 GO:GO:0008610 GO:GO:0005681
InterPro:IPR000772 GO:GO:0045666 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000398 GO:GO:0000151
GO:GO:0048711 GO:GO:0001833 GO:GO:0000974 GO:GO:0048026
GeneTree:ENSGT00700000104487 KO:K10599 InterPro:IPR013915
Pfam:PF08606 CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG
EMBL:AF251503 EMBL:AF386760 EMBL:AK047693 EMBL:AK076998
EMBL:AK088769 EMBL:AK164681 EMBL:BC004070 IPI:IPI00222760
IPI:IPI00480440 IPI:IPI00480507 RefSeq:NP_001240772.1
RefSeq:NP_001240773.1 RefSeq:NP_598890.1 UniGene:Mm.225898
ProteinModelPortal:Q99KP6 SMR:Q99KP6 IntAct:Q99KP6 STRING:Q99KP6
PhosphoSite:Q99KP6 REPRODUCTION-2DPAGE:Q99KP6 PaxDb:Q99KP6
PRIDE:Q99KP6 Ensembl:ENSMUST00000025642 Ensembl:ENSMUST00000178868
GeneID:28000 KEGG:mmu:28000 UCSC:uc008grf.1 InParanoid:Q99KP6
NextBio:306504 Bgee:Q99KP6 Genevestigator:Q99KP6
GermOnline:ENSMUSG00000024735 Uniprot:Q99KP6
Length = 504
Score = 81 (33.6 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 442 EVRQHLEI-DAHVGGVN--DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
+V H+ + A + G+ D+ S NK ++T G DK + V+D + +GH
Sbjct: 209 QVASHVGLHSASIPGILALDLCPSDTNK---ILTGGADKNVVVFDKSTEQILATLKGHTK 265
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
V SV H + + +FS + D I+ W N
Sbjct: 266 KVTSVVFHPSQEL--VFSASPDATIRIWSVPN 295
Score = 72 (30.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 31/143 (21%), Positives = 50/143 (34%)
Query: 777 GKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG-GKISLFNXX 835
G T ++W + N S P + A S+N Y+ +A+ + L++
Sbjct: 366 GTGTMDSQIKIWDLKERTNVANFPGHSGP---ITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 836 XXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITG 895
Q +A+G D +QIY + HS TG
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTG 480
Query: 896 LAFSHALNVLVSSGADSQLCVWS 918
+AF H + S+G D L +S
Sbjct: 481 VAFGHHAKFIASTGMDRSLKFYS 503
Score = 65 (27.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 24/91 (26%), Positives = 39/91 (42%)
Query: 545 TTMAYSADGTRTYQGFRKRSLGV--VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSI-D 601
T +S T Q R V + T + L++ DD F D+ + ++LT + D
Sbjct: 287 TIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTD 346
Query: 602 ADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
G + +F+ DG + T D+ IKI
Sbjct: 347 ETSGCSLTCA-QFHPDGLIFGTGTMDSQIKI 376
>RGD|708496 [details] [associations]
symbol:Prpf19 "PRP19/PSO4 pre-mRNA processing factor 19 homolog
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0000209 "protein
polyubiquitination" evidence=IEA;ISO] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO;ISS] [GO:0000974 "Prp19 complex"
evidence=IEA;ISO;ISS] [GO:0001833 "inner cell mass cell
proliferation" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005811 "lipid particle"
evidence=IEA;ISO] [GO:0005819 "spindle" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008610 "lipid biosynthetic process"
evidence=IEA;ISO] [GO:0016607 "nuclear speck" evidence=IEA;ISO]
[GO:0034450 "ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO]
[GO:0042802 "identical protein binding" evidence=IEA;ISO]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA;ISO] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA;ISO] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA;ISO]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
[GO:0005681 "spliceosomal complex" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 81 (33.6 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 442 EVRQHLEI-DAHVGGVN--DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
+V H+ + A + G+ D+ S NK ++T G DK + V+D + +GH
Sbjct: 209 QVASHVGLHSASIPGILALDLCPSDTNK---ILTGGADKNVVVFDKSTEQILATLKGHTK 265
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
V SV H + + +FS + D I+ W N
Sbjct: 266 KVTSVVFHPSQEL--VFSASPDATIRIWSVPN 295
Score = 72 (30.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 31/143 (21%), Positives = 50/143 (34%)
Query: 777 GKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG-GKISLFNXX 835
G T ++W + N S P + A S+N Y+ +A+ + L++
Sbjct: 366 GTGTMDSQIKIWDLKERTNVANFPGHSGP---ITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 836 XXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITG 895
Q +A+G D +QIY + HS TG
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTG 480
Query: 896 LAFSHALNVLVSSGADSQLCVWS 918
+AF H + S+G D L +S
Sbjct: 481 VAFGHHAKFIASTGMDRSLKFYS 503
Score = 65 (27.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 24/91 (26%), Positives = 39/91 (42%)
Query: 545 TTMAYSADGTRTYQGFRKRSLGV--VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSI-D 601
T +S T Q R V + T + L++ DD F D+ + ++LT + D
Sbjct: 287 TIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTD 346
Query: 602 ADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
G + +F+ DG + T D+ IKI
Sbjct: 347 ETSGCSLTCA-QFHPDGLIFGTGTMDSQIKI 376
>UNIPROTKB|Q9JMJ4 [details] [associations]
symbol:Prpf19 "Pre-mRNA-processing factor 19" species:10116
"Rattus norvegicus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin
ligase activity" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0048026 "positive regulation of
mRNA splicing, via spliceosome" evidence=IEA] [GO:0048711 "positive
regulation of astrocyte differentiation" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00504 EMBL:AB020022 RGD:708496 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005819 InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607
GO:GO:0006281 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR000772 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0000209 GO:GO:0000398 GO:GO:0071013 GO:GO:0000151
GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 CTD:27339
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:BC107669 IPI:IPI00204772
RefSeq:NP_647549.2 UniGene:Rn.19573 ProteinModelPortal:Q9JMJ4
SMR:Q9JMJ4 IntAct:Q9JMJ4 STRING:Q9JMJ4 PhosphoSite:Q9JMJ4
PRIDE:Q9JMJ4 GeneID:246216 KEGG:rno:246216 UCSC:RGD:708496
InParanoid:Q9JMJ4 NextBio:623503 Genevestigator:Q9JMJ4
GermOnline:ENSRNOG00000020897 Uniprot:Q9JMJ4
Length = 504
Score = 81 (33.6 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 442 EVRQHLEI-DAHVGGVN--DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
+V H+ + A + G+ D+ S NK ++T G DK + V+D + +GH
Sbjct: 209 QVASHVGLHSASIPGILALDLCPSDTNK---ILTGGADKNVVVFDKSTEQILATLKGHTK 265
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
V SV H + + +FS + D I+ W N
Sbjct: 266 KVTSVVFHPSQEL--VFSASPDATIRIWSVPN 295
Score = 72 (30.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 31/143 (21%), Positives = 50/143 (34%)
Query: 777 GKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG-GKISLFNXX 835
G T ++W + N S P + A S+N Y+ +A+ + L++
Sbjct: 366 GTGTMDSQIKIWDLKERTNVANFPGHSGP---ITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 836 XXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITG 895
Q +A+G D +QIY + HS TG
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTG 480
Query: 896 LAFSHALNVLVSSGADSQLCVWS 918
+AF H + S+G D L +S
Sbjct: 481 VAFGHHAKFIASTGMDRSLKFYS 503
Score = 65 (27.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 24/91 (26%), Positives = 39/91 (42%)
Query: 545 TTMAYSADGTRTYQGFRKRSLGV--VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSI-D 601
T +S T Q R V + T + L++ DD F D+ + ++LT + D
Sbjct: 287 TIRIWSVPNTSCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTD 346
Query: 602 ADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
G + +F+ DG + T D+ IKI
Sbjct: 347 ETSGCSLTCA-QFHPDGLIFGTGTMDSQIKI 376
>UNIPROTKB|F1NKR5 [details] [associations]
symbol:WDR36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003824 "catalytic activity" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR011041 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04192 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0003824 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006364 GO:GO:0032040
SUPFAM:SSF50952 GeneTree:ENSGT00390000004976 OMA:DGIIACH
EMBL:AADN02056073 EMBL:AADN02056074 EMBL:AADN02056075
EMBL:AADN02056076 EMBL:AADN02056077 EMBL:AADN02056078
IPI:IPI00599626 ProteinModelPortal:F1NKR5
Ensembl:ENSGALT00000000326 Uniprot:F1NKR5
Length = 890
Score = 89 (36.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+D+ I+ I DD SI + ++ ++ K GH RI + FS L++S D + W
Sbjct: 531 RDSGILGIAFDDFSISVLDIETWKIVRKFSGHHGRINDMTFSPDGRWLITSSMDCTIKTW 590
Score = 79 (32.9 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 450 DAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVW--DATNGAKQYIFE--GHEAPVYSVCP 505
+AH V ++F P + L +IT G D I+VW D G + + GH AP +
Sbjct: 269 NAHSTAVAGMSFV-PGEPL-LITNGADNAIRVWIFDGPGGTGRVLRSRMGHSAPPTKI-R 325
Query: 506 HHKENIQFIFSTALDGKIKAW 526
+H +N + I S DG ++++
Sbjct: 326 YHGQNGEQILSAGQDGTLQSF 346
Score = 58 (25.5 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 350 MSMDFHP-VQQTLLLVGTNVGDIGLWEVGSRERLVLRNFKVWDLGACSMPLQAALV 404
+S HP +L+G+ G + LW + S + +L +F W LG ++ QA V
Sbjct: 146 VSAILHPSTYLNKILLGSEQGGLQLWNIRSNK--LLYSFPGWGLGVTTLA-QAPAV 198
>TAIR|locus:2037798 [details] [associations]
symbol:PWP2 "AT1G15440" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0080008 HSSP:Q04724
HOGENOM:HOG000160363 KO:K14558 OMA:VWQCDTP InterPro:IPR027145
InterPro:IPR007148 PANTHER:PTHR19858 Pfam:PF04003 EMBL:AY065425
EMBL:AY133789 IPI:IPI00543736 RefSeq:NP_172998.1 UniGene:At.28488
ProteinModelPortal:Q8VYZ5 SMR:Q8VYZ5 STRING:Q8VYZ5 PaxDb:Q8VYZ5
PRIDE:Q8VYZ5 EnsemblPlants:AT1G15440.1 GeneID:838115
KEGG:ath:AT1G15440 TAIR:At1g15440 InParanoid:Q8VYZ5
PhylomeDB:Q8VYZ5 ProtClustDB:CLSN2679476 ArrayExpress:Q8VYZ5
Genevestigator:Q8VYZ5 Uniprot:Q8VYZ5
Length = 900
Score = 103 (41.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 27/94 (28%), Positives = 44/94 (46%)
Query: 447 LEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPH 506
L+ H VN + +S P+ QL + T DD +KVW+ +G F H V ++ H
Sbjct: 383 LKQQGHYFDVNCVTYS-PDSQL-LATGADDNKVKVWNVMSGTCFITFTEHTNAVTAL--H 438
Query: 507 HKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAP 540
+ + S +LDG ++AW + + Y P
Sbjct: 439 FMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTP 472
Score = 77 (32.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 17/61 (27%), Positives = 30/61 (49%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P + + A +D I +++ + ++K L GH + GL FS +L SS D + +
Sbjct: 484 PSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRL 543
Query: 917 W 917
W
Sbjct: 544 W 544
>ZFIN|ZDB-GENE-040426-2855 [details] [associations]
symbol:gnb1b "guanine nucleotide binding protein
(G protein), beta polypeptide 1b" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-040426-2855 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 HSSP:P16649 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OMA:CMLWDIE InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:CU207276 EMBL:CR854824 EMBL:BC044482
EMBL:BC152684 IPI:IPI00483806 RefSeq:NP_998646.1
RefSeq:XP_003198887.1 UniGene:Dr.26330 SMR:Q803H5 STRING:Q803H5
Ensembl:ENSDART00000015309 Ensembl:ENSDART00000084989
Ensembl:ENSDART00000136035 GeneID:100537780 GeneID:406796
KEGG:dre:100537780 KEGG:dre:406796 CTD:406796 InParanoid:Q803H5
NextBio:20818306 Uniprot:Q803H5
Length = 340
Score = 94 (38.1 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 30/112 (26%), Positives = 46/112 (41%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGD-EVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
++P G+ +I IYS + VR E+ H G ++ F N+ ++T
Sbjct: 105 YAPSGNYVACGGLDNICSIYSLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ---IVTSS 161
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D T +WD G + F GH V S+ + F+ S A D K W
Sbjct: 162 GDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRL-FV-SGACDASAKLW 211
Score = 60 (26.2 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 555 RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRF 614
+T+ G + + + F N F DD + + +D+ + Q L D + + F
Sbjct: 220 QTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAF 278
Query: 615 NKDGCLLAVSTND 627
+K G LL +D
Sbjct: 279 SKSGRLLLAGYDD 291
Score = 56 (24.8 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGA-DSQLCV 916
+ ++ G DD + +++ + L GH R++ L + + V++G+ DS L +
Sbjct: 280 KSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKI 338
Query: 917 WS 918
W+
Sbjct: 339 WN 340
>UNIPROTKB|F1S8S6 [details] [associations]
symbol:WDR26 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 OMA:IRGQFYQ CTD:80232 EMBL:CU927957
RefSeq:XP_003357688.1 UniGene:Ssc.21945 Ensembl:ENSSSCT00000011871
GeneID:100523327 KEGG:ssc:100523327 Uniprot:F1S8S6
Length = 660
Score = 90 (36.7 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 857 PQDNNIIAIGMDD-SSIQIYNVRVDEVKSKL-KGHSKRITGLAFSHALNVLVSSGADSQL 914
P DN ++A G DD S + ++NV+ E+++K+ + H +T +A++ V+ G Q
Sbjct: 410 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 469
Query: 915 CVWSSDG-----WEKQKNRFLQ-IPTGRTPTAQSDT 944
DG WE + + L + G+T A SDT
Sbjct: 470 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 504
Score = 80 (33.2 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 33/142 (23%), Positives = 68/142 (47%)
Query: 58 MKIFFEIRKQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 117
+++ F + +QKYLE L+ +A+++L +L +N E ++ L + +
Sbjct: 208 VRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLK-YNTERIHVLSGYLMCSHAEDLRA 266
Query: 118 LSKY-GDTKSARSIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLC-- 174
+++ G ++RS +L +L+ + + + L RL+TL+ Q++ Q C
Sbjct: 267 KAEWEGKGTASRSKLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLY 317
Query: 175 KNPR--PNPDIKTLFVDHTCGQ 194
N + N D +L +DH C +
Sbjct: 318 HNTKLDNNLDSVSLLIDHVCSR 339
Score = 52 (23.4 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 613 RFNKDGCLLAVSTNDNGIKILATSDG---IRLLRTFENLAYDAS 653
+F+ DG LA + D + I ++LL+T E AY S
Sbjct: 361 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVS 404
Score = 40 (19.1 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1041 IAAHPQEPNEFALGLSDGGVHVFEP 1065
++ +PQ P+ A DG V ++ P
Sbjct: 618 VSWNPQIPSMMASASDDGTVRIWGP 642
>UNIPROTKB|Q9H7D7 [details] [associations]
symbol:WDR26 "WD repeat-containing protein 26" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOVERGEN:HBG083958 OMA:IRGQFYQ OrthoDB:EOG4GHZNV EMBL:AB209887
EMBL:AC099790 EMBL:BC031471 EMBL:BC034498 EMBL:BC052301
EMBL:BC063817 EMBL:AY221751 EMBL:AY304473 EMBL:AF130049
EMBL:EF011612 EMBL:AK024669 IPI:IPI00414197 IPI:IPI00645819
IPI:IPI00646469 IPI:IPI00829602 RefSeq:NP_001108585.2
RefSeq:NP_079436.4 UniGene:Hs.497873 UniGene:Hs.729289
ProteinModelPortal:Q9H7D7 SMR:Q9H7D7 IntAct:Q9H7D7 STRING:Q9H7D7
PhosphoSite:Q9H7D7 DMDM:134047967 PaxDb:Q9H7D7 PRIDE:Q9H7D7
Ensembl:ENST00000295024 Ensembl:ENST00000366852
Ensembl:ENST00000414423 GeneID:80232 KEGG:hsa:80232 UCSC:uc001hop.4
UCSC:uc001hoq.4 UCSC:uc021pjt.1 CTD:80232 GeneCards:GC01M224573
HGNC:HGNC:21208 HPA:HPA028539 neXtProt:NX_Q9H7D7
PharmGKB:PA134907873 InParanoid:Q9H7D7 ChiTaRS:WDR26
GenomeRNAi:80232 NextBio:70673 ArrayExpress:Q9H7D7 Bgee:Q9H7D7
CleanEx:HS_WDR26 Genevestigator:Q9H7D7 GermOnline:ENSG00000162923
Uniprot:Q9H7D7
Length = 661
Score = 90 (36.7 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 857 PQDNNIIAIGMDD-SSIQIYNVRVDEVKSKL-KGHSKRITGLAFSHALNVLVSSGADSQL 914
P DN ++A G DD S + ++NV+ E+++K+ + H +T +A++ V+ G Q
Sbjct: 411 PDDNYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 470
Query: 915 CVWSSDG-----WEKQKNRFLQ-IPTGRTPTAQSDT 944
DG WE + + L + G+T A SDT
Sbjct: 471 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 505
Score = 80 (33.2 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 33/142 (23%), Positives = 68/142 (47%)
Query: 58 MKIFFEIRKQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 117
+++ F + +QKYLE L+ +A+++L +L +N E ++ L + +
Sbjct: 209 VRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLK-YNTERIHVLSGYLMCSHAEDLRA 267
Query: 118 LSKY-GDTKSARSIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLC-- 174
+++ G ++RS +L +L+ + + + L RL+TL+ Q++ Q C
Sbjct: 268 KAEWEGKGTASRSKLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLY 318
Query: 175 KNPR--PNPDIKTLFVDHTCGQ 194
N + N D +L +DH C +
Sbjct: 319 HNTKLDNNLDSVSLLIDHVCSR 340
Score = 52 (23.4 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 613 RFNKDGCLLAVSTNDNGIKILATSDG---IRLLRTFENLAYDAS 653
+F+ DG LA + D + I ++LL+T E AY S
Sbjct: 362 KFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVS 405
Score = 40 (19.1 bits), Expect = 0.00034, Sum P(4) = 0.00034
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1041 IAAHPQEPNEFALGLSDGGVHVFEP 1065
++ +PQ P+ A DG V ++ P
Sbjct: 619 VSWNPQIPSMMASASDDGTVRIWGP 643
>UNIPROTKB|F1SQA9 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005635 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00550000075049 EMBL:CU469341
Ensembl:ENSSSCT00000012664 OMA:REISADH Uniprot:F1SQA9
Length = 158
Score = 110 (43.8 bits), Expect = 0.00035, P = 0.00035
Identities = 33/117 (28%), Positives = 52/117 (44%)
Query: 420 GSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTI 479
G+ S V+I+ G ++ ++ H G V +A++HP + +C D+ +
Sbjct: 25 GTRLATCSSDRSVKIFDVRNGGQILI-ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKV 83
Query: 480 KVWDATNGA--KQYIFEGHEAPVYSVC--PHHKENIQFIFSTALDGKIKAWLYDNLG 532
+W NG K + GH++ V SVC PH I S+ DG I Y LG
Sbjct: 84 IIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSS--DGAISLLTYTGLG 138
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 115 (45.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 40/153 (26%), Positives = 64/153 (41%)
Query: 410 SVNRVIWSPDGSLFGVAYS-RHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQL 468
++N V S DG LF ++ S H V+++ G+ +R + H V ++FS N+Q
Sbjct: 74 AINDVSISSDG-LFALSGSWDHSVRLWDLSLGETIRSFI---GHTSDVFSVSFSPDNRQ- 128
Query: 469 CVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKE--NIQFIFSTALDGKIKAW 526
+++ DKTIK+W+ K Y + + C N I S D +K W
Sbjct: 129 -IVSASRDKTIKLWNTLAQCK-YTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Query: 527 LYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQG 559
N + E T+ S DG+ G
Sbjct: 187 NLKNCDLNKNLEGHTGVLNTVTISPDGSLCASG 219
Score = 52 (23.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 577 FLAAGDDFSIKFWDMDSVQLLTSI----DADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+L A D I+ W+++S +++ I + G+P + ++ +G LL + D I +
Sbjct: 256 WLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYV 315
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 115 (45.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 40/153 (26%), Positives = 64/153 (41%)
Query: 410 SVNRVIWSPDGSLFGVAYS-RHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQL 468
++N V S DG LF ++ S H V+++ G+ +R + H V ++FS N+Q
Sbjct: 74 AINDVSISSDG-LFALSGSWDHSVRLWDLSLGETIRSFI---GHTSDVFSVSFSPDNRQ- 128
Query: 469 CVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKE--NIQFIFSTALDGKIKAW 526
+++ DKTIK+W+ K Y + + C N I S D +K W
Sbjct: 129 -IVSASRDKTIKLWNTLAQCK-YTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVW 186
Query: 527 LYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQG 559
N + E T+ S DG+ G
Sbjct: 187 NLKNCDLNKNLEGHTGVLNTVTISPDGSLCASG 219
Score = 52 (23.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 14/60 (23%), Positives = 30/60 (50%)
Query: 577 FLAAGDDFSIKFWDMDSVQLLTSI----DADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+L A D I+ W+++S +++ I + G+P + ++ +G LL + D I +
Sbjct: 256 WLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVPWCTSLTWSANGQLLYCGSTDGNIYV 315
>UNIPROTKB|F1N1C9 [details] [associations]
symbol:BRWD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001487 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297
SMART:SM00320 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00700000104382 OMA:MTGNNLP InterPro:IPR011044
SUPFAM:SSF50969 EMBL:DAAA02072255 IPI:IPI00686367
Ensembl:ENSBTAT00000021597 Uniprot:F1N1C9
Length = 1658
Score = 112 (44.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 441 DEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPV 500
D+ R + H ++D+A ++ N + +C DK ++VW A + +GH A +
Sbjct: 67 DDGRLLATLRGHSAEISDMAVNYENTLIAAGSC--DKVVRVWCLRTCAPVAVLQGHSASI 124
Query: 501 YSV--CPHHKENIQFIFSTALDGKIKAW 526
S+ CP K +++ ST DG I W
Sbjct: 125 TSIQFCPSTKGTTRYLTSTGADGTICFW 152
Score = 73 (30.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALN--VLVSSGADSQLCV 916
D +I +++ ++++N ++ L GH + L +H + +++S+G D + V
Sbjct: 292 DTTVIT-AVNNFLLKVWNSITGQLLHTLSGHDDEVFVLE-AHPFDQRIILSAGHDGNIFV 349
Query: 917 WSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHF 955
W D K +N F I G+ A D + F D HF
Sbjct: 350 WDLDRGTKIRNYFNMIE-GQGHGAVFDCK--FSPDGNHF 385
>ZFIN|ZDB-GENE-040426-1851 [details] [associations]
symbol:wdr61 "WD repeat domain 61" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0016593 "Cdc73/Paf1 complex" evidence=ISS] [GO:0035327
"transcriptionally active chromatin" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0055087 "Ski
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1851 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0032968 GO:GO:0016593 GO:GO:0055087 CTD:80349
HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW EMBL:BC062834
IPI:IPI00484493 RefSeq:NP_957147.1 UniGene:Dr.122500
ProteinModelPortal:Q6P5M2 STRING:Q6P5M2 PRIDE:Q6P5M2 DNASU:393827
GeneID:393827 KEGG:dre:393827 NextBio:20814815 Uniprot:Q6P5M2
Length = 305
Score = 96 (38.9 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSS 919
I+IY+V+ + L GH + +AFS VSS +D + VW +
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDT 261
Score = 74 (31.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV + ++N +AA D I+ WD+++ + + S+DA G + A + F+ D +A
Sbjct: 65 LGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDA-GPVDAWT-VAFSPDSKYIA 122
Query: 623 VSTNDNGIKILATSDG 638
++ + I G
Sbjct: 123 TGSHLGKVNIFGVESG 138
Score = 70 (29.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 25/88 (28%), Positives = 42/88 (47%)
Query: 470 VITCGDDKTIKVWDATNGAK--QYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWL 527
++T D +KVW ++ Q+ EGH+ V SV + +N S++LD I+ W
Sbjct: 35 IVTGSLDDLVKVWKWSDEKLELQWTLEGHQLGVVSV--NISQNGAIAASSSLDAHIRLWD 92
Query: 528 YDNLGSRVDYEAPG---RWCTTMAYSAD 552
+ G ++ G W T+A+S D
Sbjct: 93 LET-GKQIKSMDAGPVDAW--TVAFSPD 117
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 8/37 (21%), Positives = 18/37 (48%)
Query: 496 HEAPVYSVC--PHHKENIQFIFSTALDGKIKAWLYDN 530
HE +++ K+ + I + +LD +K W + +
Sbjct: 15 HEDAIWTAAWGRSEKDGSETIVTGSLDDLVKVWKWSD 51
>MGI|MGI:3029414 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007010 "cytoskeleton organization" evidence=ISO] [GO:0008360
"regulation of cell shape" evidence=ISO] InterPro:IPR017986
InterPro:IPR001487 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00297 SMART:SM00320
MGI:MGI:3029414 GO:GO:0007010 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0008360 InterPro:IPR019775 eggNOG:COG2319 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 KO:K11798
GeneTree:ENSGT00700000104382 CTD:254065 HOVERGEN:HBG108248
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969 EMBL:AK050539
EMBL:AK139563 EMBL:AK163354 EMBL:BX000698 EMBL:AL731764
EMBL:BC082562 IPI:IPI00652540 IPI:IPI00660178 IPI:IPI00750468
RefSeq:NP_001074946.1 UniGene:Mm.100112 UniGene:Mm.426127
ProteinModelPortal:A2AHJ4 SMR:A2AHJ4 PhosphoSite:A2AHJ4
PRIDE:A2AHJ4 Ensembl:ENSMUST00000101283 Ensembl:ENSMUST00000150434
GeneID:382236 KEGG:mmu:382236 UCSC:uc009ucm.1 UCSC:uc009ucn.1
HOGENOM:HOG000203884 InParanoid:A2AHJ4 ChiTaRS:BRWD3 NextBio:403145
Bgee:A2AHJ4 CleanEx:MM_BRWD3 Genevestigator:A2AHJ4 Uniprot:A2AHJ4
Length = 1799
Score = 112 (44.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 441 DEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPV 500
D+ R + H ++D+A ++ N + +C DK ++VW A + +GH A +
Sbjct: 210 DDGRLLATLRGHSAEISDMAVNYENTLIAAGSC--DKVVRVWCLRTCAPVAVLQGHSASI 267
Query: 501 YSV--CPHHKENIQFIFSTALDGKIKAW 526
S+ CP K +++ ST DG I W
Sbjct: 268 TSIQFCPSTKGTTRYLTSTGADGTICFW 295
Score = 95 (38.5 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 24/92 (26%), Positives = 43/92 (46%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALN----VLVSSGADSQL 914
+N +IA G D ++++ +R + L+GHS IT + F + L S+GAD +
Sbjct: 233 ENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTI 292
Query: 915 CVWSSDGWEKQKNRFLQIPTGRTPTAQSDTRV 946
C W W + +F P T ++ ++
Sbjct: 293 CFWQ---WHVKTMKFRDRPVKFTERSRPGVQI 321
Score = 91 (37.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 30/123 (24%), Positives = 53/123 (43%)
Query: 404 VKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSH 463
VK P V VN I S L G + H+ +Y ++ H I H+ V +AF
Sbjct: 138 VKPPNV-VN--ITSAR-QLTGCSRFSHVFPSSAYQ---HIKMHKRILGHLSSVYCVAFDR 190
Query: 464 PNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKI 523
++ + T DD +K+W +G GH A + + +++ + I + + D +
Sbjct: 191 SGRR--IFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTL--IAAGSCDKVV 246
Query: 524 KAW 526
+ W
Sbjct: 247 RVW 249
Score = 72 (30.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALN--VLVSSGADSQLCV 916
D +I +++ ++++N ++ L GH + L +H + +++S+G D + +
Sbjct: 435 DTTVIT-AVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLE-AHPFDQRIILSAGHDGNIFI 492
Query: 917 WSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHF 955
W D K +N F I G+ A D + F D HF
Sbjct: 493 WDLDRGTKIRNYFNMIE-GQGHGAVFDCK--FSPDGNHF 528
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 127 (49.8 bits), Expect = 0.00037, P = 0.00037
Identities = 63/266 (23%), Positives = 118/266 (44%)
Query: 386 NFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQ 445
+ +V+D + +M L G V + ++ D LF + S H ++++ ++R
Sbjct: 481 SIRVYDYKSQNMECVQTLKGHEG-PVESICYN-DQYLFSGS-SDHSIKVWDLK---KLRC 534
Query: 446 HLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCP 505
++ H V+ + + +K L + DKTIKVWD +Y E H V ++C
Sbjct: 535 IFTLEGHDKPVHTVLLN--DKYL--FSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCI 590
Query: 506 HHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPG--RWCTTMA------YSADGTRTY 557
Q++FS + D IK W D R +Y G +W TT+ YS +T
Sbjct: 591 SG----QYLFSGSNDKTIKVW--DLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTI 644
Query: 558 QGFRKRSLGV----------VQFDTTKNRFL-AAGDDFSIKFWDMDSVQLLTSIDADGGL 606
+ + +SL V+ ++ L A DD +IK WD+++++ T+++
Sbjct: 645 RVWNLKSLECSATLRGHDRWVEHMVICDKLLFTASDDNTIKIWDLETLRCNTTLEGHNAT 704
Query: 607 PASPRIRFNKDGCLLAVSTNDNGIKI 632
+ +K C+++ S +D I++
Sbjct: 705 VQCLAVWEDKK-CVISCS-HDQSIRV 728
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 111 (44.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 38/141 (26%), Positives = 63/141 (44%)
Query: 388 KVWDL--GACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQ 445
+ W+ G CS +Q + D VNR+ + D L A ++ V++Y +
Sbjct: 15 RFWEALTGVCSRTIQHS---DS--QVNRLEITNDKKLLATAGHQN-VRLYDIRTTNP-NP 67
Query: 446 HLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCP 505
+ H G V ++F N+ + +T +D TIKVWD + + ++ H APV V
Sbjct: 68 VASFEGHRGNVTSVSFQQDNRWM--VTSSEDGTIKVWDVRSPSIPRNYK-HNAPVNEVVI 124
Query: 506 HHKENIQFIFSTALDGKIKAW 526
H + + S DG I+ W
Sbjct: 125 HPNQGE--LISCDRDGNIRIW 143
Score = 55 (24.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 884 SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSD 920
+K + HS IT + S + L + AD VWS D
Sbjct: 201 TKFRAHSTYITRILLSSDVKHLATCSADHTARVWSID 237
Score = 55 (24.4 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 12/50 (24%), Positives = 29/50 (58%)
Query: 869 DSSIQIYNVRVD-EVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
D + +++++ D ++++ L GH + + AFS LV++ +D + +W
Sbjct: 228 DHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLW 277
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 65/267 (24%), Positives = 101/267 (37%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
+VW L + + L ++ + WSP G A I+S G E +
Sbjct: 39 RVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFECNA 97
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY----IFEGHEAPVYSV 503
++ H V +++S L TC DK++ +W+ G ++ + H V V
Sbjct: 98 TLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWEVA-GDDEFECAAVLNAHTQDVKRV 154
Query: 504 CPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKR 563
H ++I + S + D IK + L S D A T+ +S D + R
Sbjct: 155 VWHPTKDI--LASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSID----FDAEGDR 208
Query: 564 SLGVVQFDTTKN-RFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
+ T K R G+D I D SV + A + + K L+A
Sbjct: 209 LVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIA 268
Query: 623 VSTNDNGIKILA-TSDGIRLLRTFENL 648
D+GI+I TSD R TFE L
Sbjct: 269 TGCGDDGIRIFKETSDSKRDEPTFEQL 295
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 122 (48.0 bits), Expect = 0.00039, P = 0.00039
Identities = 65/267 (24%), Positives = 101/267 (37%)
Query: 388 KVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHL 447
+VW L + + L ++ + WSP G A I+S G E +
Sbjct: 39 RVWSLSGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSG-EFECNA 97
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQY----IFEGHEAPVYSV 503
++ H V +++S L TC DK++ +W+ G ++ + H V V
Sbjct: 98 TLEGHENEVKSVSWSRSGGLLA--TCSRDKSVWIWEVA-GDDEFECAAVLNAHTQDVKRV 154
Query: 504 CPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKR 563
H ++I + S + D IK + L S D A T+ +S D + R
Sbjct: 155 VWHPTKDI--LASASYDNTIKMFAESQLDSDWDCTATLSSHTSTVWSID----FDAEGDR 208
Query: 564 SLGVVQFDTTKN-RFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
+ T K R G+D I D SV + A + + K L+A
Sbjct: 209 LVSCSDDKTLKIWRAYHPGNDAGIATPDKQSVWKCVCTLSGQHSRAIYDVSWCKLTGLIA 268
Query: 623 VSTNDNGIKILA-TSDGIRLLRTFENL 648
D+GI+I TSD R TFE L
Sbjct: 269 TGCGDDGIRIFKETSDSKRDEPTFEQL 295
>UNIPROTKB|Q6PBD6 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:2001162 GeneTree:ENSGT00700000104507 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OMA:IATGSHH
OrthoDB:EOG4VMFFW EMBL:BC059759 RefSeq:NP_988871.1 UniGene:Str.5901
ProteinModelPortal:Q6PBD6 Ensembl:ENSXETT00000020997 GeneID:394466
KEGG:xtr:394466 Xenbase:XB-GENE-5751496 InParanoid:Q6PBD6
Bgee:Q6PBD6 Uniprot:Q6PBD6
Length = 305
Score = 94 (38.1 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 28/106 (26%), Positives = 44/106 (41%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
I+IY V+ + + L GH + +AFS VSS +D + VW
Sbjct: 214 IKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVW 259
Score = 70 (29.7 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV D + + + A D I+ WD++S + + +IDA G + A + F+ D LA
Sbjct: 65 LGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDA-GPVDAWS-VAFSPDSQHLA 122
Query: 623 VSTNDNGIKILATSDG 638
++ + I G
Sbjct: 123 TGSHVGKVNIFGVETG 138
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 496 HEAPVYSVC--PHHKENIQFIFSTALDGKIKAWLYDN 530
HE ++SV + + + + S +LD +K W + +
Sbjct: 15 HEDAIWSVGWGKNSNDGSELVISGSLDDLVKVWKWSD 51
>TAIR|locus:2092722 [details] [associations]
symbol:LST8-1 "AT3G18140" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005768 "endosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0048571
"long-day photoperiodism" evidence=IMP] [GO:1900088 "regulation of
inositol biosynthetic process" evidence=IMP] [GO:1900091
"regulation of raffinose biosynthetic process" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002686 GO:GO:0016020 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005768 InterPro:IPR020472
PRINTS:PR00320 EMBL:AB020749 HSSP:P16649 GO:GO:0048571 OMA:NNKGNCY
EMBL:AY087463 EMBL:BT002312 IPI:IPI00542303 RefSeq:NP_188442.1
UniGene:At.6055 ProteinModelPortal:Q9LV27 SMR:Q9LV27 IntAct:Q9LV27
STRING:Q9LV27 PRIDE:Q9LV27 EnsemblPlants:AT3G18140.1 GeneID:821339
KEGG:ath:AT3G18140 TAIR:At3g18140 InParanoid:Q9LV27
PhylomeDB:Q9LV27 ProtClustDB:CLSN2683726 Genevestigator:Q9LV27
GO:GO:1900088 GO:GO:1900091 Uniprot:Q9LV27
Length = 305
Score = 122 (48.0 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 37/145 (25%), Positives = 61/145 (42%)
Query: 386 NFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQ 445
N +VWDL A S + D V V+W DG++ A +R ++ G +
Sbjct: 142 NIRVWDLRANSCSCELVPEVDTAVRSLTVMW--DGTMVVAANNRGTCYVWRLLRGKQTMT 199
Query: 446 HLE----IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVY 501
E + AH G + S NK L T DKT+K+W+ + + GH+ V+
Sbjct: 200 EFEPLHKLQAHNGHILKCLLSPANKYLA--TASSDKTVKIWNVDGFKLEKVLTGHQRWVW 257
Query: 502 SVCPHHKENIQFIFSTALDGKIKAW 526
C + +F+ + + D + W
Sbjct: 258 D-CVFSVDG-EFLVTASSDMTARLW 280
Score = 43 (20.2 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 355 HPVQQTLLLVGTNVGDIGLWEV 376
HP QT L+ G G+I +W++
Sbjct: 128 HP-NQTELISGDQNGNIRVWDL 148
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 85 (35.0 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNG----AKQYIFEGHEAPV---- 500
+ H G V A+ HP +L +CG+DKTI+VW+ ++ A+ + +GH +
Sbjct: 10 LTGHAGRVWSAAW-HPGGKLFA-SCGEDKTIRVWNKSDTDRWVAQTVLTDGHTRTIRELA 67
Query: 501 YSVCPHHKENIQFIFSTAL 519
+S C H+ + F + A+
Sbjct: 68 WSCCGHYLASASFDTTVAV 86
Score = 81 (33.6 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 28/149 (18%), Positives = 69/149 (46%)
Query: 869 DSSIQIYNVRVDEVK--SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSSDGWEKQK 926
D+++ +++ + E + + L+GH + + +S + N+L + D + +W Q+
Sbjct: 81 DTTVAVWDKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSRDKSVWIWEIHHAPDQE 140
Query: 927 NRF--LQIPTGRTPTAQSDTRVQFH-QDQIHFLVVHETQLAIFETTKLECVKQWV-PRES 982
+ + + + G T Q +V +H Q+ + ++ + ++ + + + P ES
Sbjct: 141 DEYECVAVLNGHT---QDVKKVCWHPQEDLLASASYDNTIRMYRQDLADSEWEMLEPLES 197
Query: 983 -SAPITHATFSCDSQLVYACFLDATVCVF 1010
S+ + +F Q + +C D TV V+
Sbjct: 198 HSSTVWSISFDATGQRLASCSEDTTVKVW 226
Score = 44 (20.5 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 997 LVYACFLDATVCVFSAANLKLRCRINPSAYLPAGVSSSNVHPLVIAAHPQEPNEFALGLS 1056
L AC D TV +F A+ R P+ L V + + +A HP P
Sbjct: 272 LATACG-DDTVRIFREASDS--DRNEPTFELVVTVEAHSQDANKVAWHPTVPGLLLTASD 328
Query: 1057 DGGVHVFEPLESE 1069
DG + +++ ++++
Sbjct: 329 DGEIKLWQYVDAD 341
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 103 (41.3 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 27/108 (25%), Positives = 48/108 (44%)
Query: 445 QHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYI--FEGHEAPVYS 502
Q + H ++D + ++L TC DKTIK+++ + + +GHE PV+
Sbjct: 5 QVISNSGHDDMIHDAGLDYYGRRLA--TCSSDKTIKIFEIEGDTHKLVETLKGHEGPVWC 62
Query: 503 VCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTTMAYS 550
V H + + S++ DGK+ W + S + G W +S
Sbjct: 63 VEWAHPKFGTILASSSYDGKVLIWREQHQSSTAPIGS-GAWTKVFDFS 109
Score = 55 (24.4 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 896 LAFSHALNVLVSSGADSQLCVWSSD--G-WEKQKN 927
+++S + N+L SG D+++ +W + G WEK K+
Sbjct: 272 VSWSPSGNILAVSGGDNKVSLWKENLRGQWEKVKD 306
Score = 48 (22.0 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 615 NKDGCLLAVSTNDNGIKILATSDGIRLLRTFENLAYDASRTSENSKPTISP 665
++ GCLLA +++D + +L D + F A+ S + P SP
Sbjct: 123 HETGCLLACASSDGHVSVLEFRDNSWTHQIFH--AHGMGVNSISWAPAASP 171
>FB|FBgn0041171 [details] [associations]
symbol:ago "archipelago" species:7227 "Drosophila
melanogaster" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0008054 "cyclin catabolic process" evidence=TAS]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=NAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0030332 "cyclin binding"
evidence=TAS] [GO:0007096 "regulation of exit from mitosis"
evidence=TAS] [GO:0045926 "negative regulation of growth"
evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
[GO:0035147 "branch fusion, open tracheal system" evidence=IMP]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] [GO:0007411 "axon guidance" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
UniPathway:UPA00143 GO:GO:0005634 GO:GO:0007411 GO:GO:0007088
EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0045926
GO:GO:0019005 GO:GO:0008054 GO:GO:0007096 GO:GO:0035147
GO:GO:0042023 GO:GO:0030332 GeneTree:ENSGT00690000101849
EMBL:AY061300 EMBL:AY075401 RefSeq:NP_523922.1 RefSeq:NP_728964.1
RefSeq:NP_728965.1 UniGene:Dm.2559 ProteinModelPortal:Q9VZF4
SMR:Q9VZF4 DIP:DIP-32477N IntAct:Q9VZF4 MINT:MINT-901835
STRING:Q9VZF4 PaxDb:Q9VZF4 PRIDE:Q9VZF4 EnsemblMetazoa:FBtr0073245
EnsemblMetazoa:FBtr0073246 EnsemblMetazoa:FBtr0073247 GeneID:38516
KEGG:dme:Dmel_CG15010 UCSC:CG15010-RA CTD:38516 FlyBase:FBgn0041171
InParanoid:Q9VZF4 KO:K10260 OMA:DLEEICT OrthoDB:EOG45TB38
PhylomeDB:Q9VZF4 GenomeRNAi:38516 NextBio:809050 Bgee:Q9VZF4
GermOnline:CG15010 GO:GO:0060253 Uniprot:Q9VZF4
Length = 1326
Score = 99 (39.9 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 44/152 (28%), Positives = 67/152 (44%)
Query: 418 PDGSLFGVAYSR-HIVQIYSYHGGDEVRQHLEIDAHVGGV-NDIAFSHPNKQLCVITCGD 475
P S + AY R HI+++ ++ VR+ + H V + FS N+ +++ D
Sbjct: 960 PIASPWKAAYMRQHIIEM-NWRSRP-VRKPKVLKGHDDHVITCLQFSG-NR---IVSGSD 1013
Query: 476 DKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRV 535
D T+KVW A NG GH V+S NI I S + D +K W D+ G+ V
Sbjct: 1014 DNTLKVWSAVNGKCLRTLVGHTGGVWS--SQMSGNI--IISGSTDRTLKVWDMDS-GACV 1068
Query: 536 DYEAPGRWCTTMAYSADGTRTYQGFRKRSLGV 567
+ G T G++ G R +L V
Sbjct: 1069 -HTLQGHTSTVRCMHLHGSKVVSGSRDATLRV 1099
Score = 86 (35.3 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 863 IAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
+ G D+SI++++V K L GH +G+ N+LVS ADS + VW
Sbjct: 1168 VVSGSLDTSIRVWDVETGNCKHTLMGHQSLTSGMELRQ--NILVSGNADSTVKVW 1220
Score = 45 (20.9 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 264 SIPAAALKHPRTPPTNPSVDYPSGDSDH 291
S P +AL RTP + PS D P + H
Sbjct: 821 STPGSALGR-RTPRSVPSRDNPPPELQH 847
>RGD|1565589 [details] [associations]
symbol:Wdr26 "WD repeat domain 26" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1565589 Gene3D:2.130.10.10 SUPFAM:SSF50978
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 IPI:IPI00767527 PRIDE:F1LTR1
Ensembl:ENSRNOT00000005059 Uniprot:F1LTR1
Length = 622
Score = 85 (35.0 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 857 PQDNNIIAIGMDD-SSIQIYNVRVDEVKSKL-KGHSKRITGLAFSHALNVLVSSGADSQL 914
P D+ ++A G DD S + ++NV+ E+++K+ + H +T +A++ V+ G Q
Sbjct: 372 PDDSYLVACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQRGQF 431
Query: 915 CVWSSDG-----WEKQKNRFLQ-IPTGRTPTAQSDT 944
DG WE + + L + G+T A SDT
Sbjct: 432 YQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLA-SDT 466
Score = 80 (33.2 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 33/142 (23%), Positives = 68/142 (47%)
Query: 58 MKIFFEIRKQKYLEALDKHDRAKAVEILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 117
+++ F + +QKYLE L+ +A+++L +L +N E ++ L + +
Sbjct: 170 VRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLK-YNTERIHVLSGYLMCSHAEDLRA 228
Query: 118 LSKY-GDTKSARSIMLVELKKLIEANPLFRDKLQFPNLKNSRLRTLINQSLNWQHQLC-- 174
+++ G ++RS +L +L+ + + + L RL+TL+ Q++ Q C
Sbjct: 229 KAEWEGKGAASRSKLLDKLQTYLPPSVM---------LPPRRLQTLLRQAVELQRDRCLY 279
Query: 175 KNPR--PNPDIKTLFVDHTCGQ 194
N + N D +L +DH C +
Sbjct: 280 HNTKLDNNLDSVSLLIDHVCSR 301
Score = 55 (24.4 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 613 RFNKDGCLLAVSTNDNGI---KILATSDGIRLLRTFENLAYDAS 653
+F+ DG LA + D + ++ A + ++LL+T E AY S
Sbjct: 323 KFSNDGTKLATGSKDTTVIVWQVDADTHLLKLLKTLEGHAYGVS 366
Score = 40 (19.1 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 1041 IAAHPQEPNEFALGLSDGGVHVFEP 1065
++ +PQ P+ A DG V ++ P
Sbjct: 580 VSWNPQIPSMMASASDDGTVRIWGP 604
>UNIPROTKB|Q5ZJH5 [details] [associations]
symbol:WDR61 "WD repeat-containing protein 61" species:9031
"Gallus gallus" [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0016593 "Cdc73/Paf1
complex" evidence=ISS] [GO:0045638 "negative regulation of myeloid
cell differentiation" evidence=ISS] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISS] [GO:2001162
"positive regulation of histone H3-K79 methylation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0035327 "transcriptionally active chromatin"
evidence=ISS] [GO:0055087 "Ski complex" evidence=ISS] [GO:0080182
"histone H3-K4 trimethylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0080182 GO:GO:0016593
GO:GO:0045638 GO:GO:2001162 GO:GO:0055087 CTD:80349
HOGENOM:HOG000036765 HOVERGEN:HBG059813 KO:K12602 OrthoDB:EOG4VMFFW
EMBL:AJ720459 IPI:IPI00584957 RefSeq:NP_001005805.1
UniGene:Gga.4665 ProteinModelPortal:Q5ZJH5 GeneID:415359
KEGG:gga:415359 InParanoid:Q5ZJH5 NextBio:20818980 Uniprot:Q5ZJH5
Length = 305
Score = 90 (36.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 27/108 (25%), Positives = 44/108 (40%)
Query: 813 ALSKNDSYVMS-ASGGKISLFNXXXXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSS 871
A S + Y+ S A G I++F+ P D+ ++ DD
Sbjct: 155 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTASDDGY 213
Query: 872 IQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSS 919
I+IY+V+ + L GH + +AF VSS +D + VW +
Sbjct: 214 IKIYDVQHANLAGTLSGHGSWVLNVAFCPDDTHFVSSSSDKSVKVWDA 261
Score = 77 (32.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 35/135 (25%), Positives = 57/135 (42%)
Query: 451 AHVGGVNDIAF--SHPNKQLCVITCGDDKTIKVWDATNGAK---QYIFEGHEAPVYSVCP 505
AH + +A+ + N VI+ D +KVW N K Q+ EGH+ V SV
Sbjct: 14 AHDDAIWSVAWGKNKKNGSETVISGSLDDLVKVWK-WNDEKLDLQWTLEGHQLGVVSVDI 72
Query: 506 HHKENIQFIFSTALDGKIKAWLYDNLGSRV---DYEAPGRWCTTMAYSADGTRTYQGFRK 562
H +I S++LD I+ W + G ++ D W ++A+S D G
Sbjct: 73 SHTGSIAA--SSSLDAHIRLWDLET-GKQIKSIDAGPVDAW--SLAFSPDSQFLATGSHV 127
Query: 563 RSLGVVQFDTTKNRF 577
+ + +T K +
Sbjct: 128 GKVNIFGVETGKKEY 142
Score = 76 (31.8 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 565 LGVVQFDTTKNRFLAAGD--DFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLA 622
LGVV D + +AA D I+ WD+++ + + SIDA G + A + F+ D LA
Sbjct: 65 LGVVSVDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDA-GPVDAWS-LAFSPDSQFLA 122
Query: 623 VSTNDNGIKILATSDG 638
++ + I G
Sbjct: 123 TGSHVGKVNIFGVETG 138
>UNIPROTKB|Q12788 [details] [associations]
symbol:TBL3 "Transducin beta-like protein 3" species:9606
"Homo sapiens" [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0032040 "small-subunit processome" evidence=IEA] [GO:0005057
"receptor signaling protein activity" evidence=TAS] [GO:0007199
"G-protein coupled receptor signaling pathway coupled to cGMP
nucleotide second messenger" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471112 GO:GO:0005057
GO:GO:0007199 EMBL:AC005606 GO:GO:0006364 GO:GO:0032040
EMBL:AC005363 CTD:10607 HOGENOM:HOG000188765 HOVERGEN:HBG058869
KO:K14555 OrthoDB:EOG42JNQR EMBL:U02609 EMBL:AB209173 EMBL:BC010231
EMBL:BC014007 EMBL:BC035409 IPI:IPI00477971 PIR:A49367
RefSeq:NP_006444.2 UniGene:Hs.513267 ProteinModelPortal:Q12788
SMR:Q12788 IntAct:Q12788 MINT:MINT-1427903 STRING:Q12788
PhosphoSite:Q12788 DMDM:223634675 SWISS-2DPAGE:Q12788 PaxDb:Q12788
PRIDE:Q12788 Ensembl:ENST00000568546 GeneID:10607 KEGG:hsa:10607
UCSC:uc002cnu.1 GeneCards:GC16P002022 HGNC:HGNC:11587 HPA:HPA042562
MIM:605915 neXtProt:NX_Q12788 PharmGKB:PA36351 OMA:HHFRGSP
PhylomeDB:Q12788 GenomeRNAi:10607 NextBio:40288 ArrayExpress:Q12788
Bgee:Q12788 CleanEx:HS_TBL3 Genevestigator:Q12788
GermOnline:ENSG00000183751 Uniprot:Q12788
Length = 808
Score = 111 (44.1 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 37/137 (27%), Positives = 56/137 (40%)
Query: 417 SPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDD 476
SPD + A ++ +++ G R I H V +AF P L + T G D
Sbjct: 75 SPDNEVLVTASRALLLAQWAWQEGSVTRLWKAI--HTAPVATMAFD-PTSTL-LATGGCD 130
Query: 477 KTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVD 536
++VWD + F G V+ V H +FS+A D I+ W +
Sbjct: 131 GAVRVWDIVRHYGTHHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRSCLAV 190
Query: 537 YEAPGRWCTTMAYSADG 553
A T++A+SADG
Sbjct: 191 LTAHYSAVTSLAFSADG 207
Score = 64 (27.6 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P D ++A D +I+++ ++ +GH + +AF L+SSG+D + +
Sbjct: 531 PMDQ-VLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKL 589
Query: 917 WS 918
W+
Sbjct: 590 WT 591
Score = 61 (26.5 bits), Expect = 0.00092, Sum P(3) = 0.00092
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 857 PQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCV 916
P D ++A G D + +++ + ++ GH + + + FS VL ++ AD + +
Sbjct: 489 PNDK-LLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADGTIKL 547
Query: 917 WS 918
W+
Sbjct: 548 WA 549
Score = 47 (21.6 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 19/71 (26%), Positives = 34/71 (47%)
Query: 577 FLAAGDDFSIKFWDMDSVQLL-TSIDADG-GLPASPRIRFNKDGCLLAVSTNDNGIKILA 634
FL AGD +++ W+ S Q + T G G + + G +L +T D+ + +L
Sbjct: 262 FLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHTAGVVLT-ATADHNL-LLY 319
Query: 635 TSDGIRLLRTF 645
+ +RL + F
Sbjct: 320 EARSLRLQKQF 330
>TAIR|locus:2135393 [details] [associations]
symbol:AT4G04940 "AT4G04940" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007319 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04192
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002687
GenomeReviews:CT486007_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006364
GO:GO:0032040 HOGENOM:HOG000217777 KO:K14554 OMA:DGIIACH
EMBL:AY059784 EMBL:AY096634 IPI:IPI00522649 RefSeq:NP_567275.1
UniGene:At.4051 UniGene:At.4052 ProteinModelPortal:Q93YS7
SMR:Q93YS7 STRING:Q93YS7 PaxDb:Q93YS7 PRIDE:Q93YS7
EnsemblPlants:AT4G04940.1 GeneID:825833 KEGG:ath:AT4G04940
TAIR:At4g04940 InParanoid:Q93YS7 PhylomeDB:Q93YS7
ProtClustDB:CLSN2917508 Genevestigator:Q93YS7 Uniprot:Q93YS7
Length = 910
Score = 99 (39.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 860 NNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWSS 919
N ++A DD I++Y+V ++ + +GH+ RIT L FS ++SS D L +W
Sbjct: 527 NGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDV 586
Query: 920 DGWEKQKNRFLQIP-TGRTPTAQSDTRVQFHQDQ 952
++ + +P T + + D H DQ
Sbjct: 587 ILAKQIDGVHVDVPITALSLSPNMDVLATAHSDQ 620
Score = 79 (32.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 33/155 (21%), Positives = 68/155 (43%)
Query: 376 VGSRERLVLRNFKVWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIY 435
VGS+E + ++W++ M Q K G SV + SP + + + + ++
Sbjct: 156 VGSQEGPL----QLWNINTKKMLYQ---FKGWGSSVTSCVSSPALDVVAIGCADGKIHVH 208
Query: 436 SYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIF-E 494
+ +E+ E A G V ++FS + L + + G I +W+ Q + +
Sbjct: 209 NIKLDEEIVT-FE-HASRGAVTALSFSTDGRPL-LASGGSFGVISIWNLNKKRLQSVIRD 265
Query: 495 GHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYD 529
H++ + S+ + N + S + D +K W++D
Sbjct: 266 AHDSSIISL--NFLANEPVLMSASADNSLKMWIFD 298
Score = 68 (29.0 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 28/93 (30%), Positives = 45/93 (48%)
Query: 556 TYQGFRKRSLGVVQFDTTKNRFLAAGDDFS-IKFWDMDSVQLLTSI-DADGGLPASPRIR 613
T++ + ++ + F T LA+G F I W+++ +L + I DA S
Sbjct: 218 TFEHASRGAVTALSFSTDGRPLLASGGSFGVISIWNLNKKRLQSVIRDAHDSSIISLNFL 277
Query: 614 FNKDGCLLAVSTNDNGIK--ILATSDGI-RLLR 643
N+ L++ S DN +K I T+DG RLLR
Sbjct: 278 ANEP-VLMSASA-DNSLKMWIFDTNDGDPRLLR 308
Score = 57 (25.1 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 348 SPMSMDFHP-VQQTLLLVGTNVGDIGLWEVGSRERLVLRNFKVWDLGACSMPLQAAL 403
+P S+ HP +LVG+ G + LW + +++ +L FK W S AL
Sbjct: 140 TPTSI-VHPDTYLNKVLVGSQEGPLQLWNINTKK--MLYQFKGWGSSVTSCVSSPAL 193
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 111 (44.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 51/217 (23%), Positives = 97/217 (44%)
Query: 378 SRERLVLRNFKVWDLGACSMPLQAALVKDPGVS-------VNRVIWSPDGSLFGVAYS-R 429
SR++ +L VWD+ + + P+ + P S V+ V+ S DG F ++ S
Sbjct: 37 SRDKTIL----VWDVDSVA-PVDEGPIGRPVRSLTGHNHFVSDVVISSDGQ-FALSGSWD 90
Query: 430 HIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAK 489
++++ + G RQ + +H V +AFS N+Q +++ DK+IK+W+ K
Sbjct: 91 KTLRLWDLNQGVSTRQFI---SHTKDVLSVAFSADNRQ--IVSGSRDKSIKLWNTLAQCK 145
Query: 490 QYIFEG-HEAPVYSV--CPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTT 546
I + H V +V P +++ + I S D +K W N + ++ + T
Sbjct: 146 YTITDDCHTDWVSTVRFSPSNRDPV--IVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNT 203
Query: 547 MAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDD 583
+ S DG+ G + + + K+ + G+D
Sbjct: 204 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND 240
Score = 55 (24.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 575 NRF-LAAGDDFSIKFWDMDSV--------QLLTSIDADGGLPASPRIRFNKDGCLLAVST 625
NR+ L A SIK WD++ ++ +S + G P + +++DG L
Sbjct: 250 NRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGY 309
Query: 626 NDNGIKILATS 636
DN I++ S
Sbjct: 310 TDNIIRVYQVS 320
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 111 (44.1 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 51/217 (23%), Positives = 97/217 (44%)
Query: 378 SRERLVLRNFKVWDLGACSMPLQAALVKDPGVS-------VNRVIWSPDGSLFGVAYS-R 429
SR++ +L VWD+ + + P+ + P S V+ V+ S DG F ++ S
Sbjct: 37 SRDKTIL----VWDVDSVA-PVDEGPIGRPVRSLTGHNHFVSDVVISSDGQ-FALSGSWD 90
Query: 430 HIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAK 489
++++ + G RQ + +H V +AFS N+Q +++ DK+IK+W+ K
Sbjct: 91 KTLRLWDLNQGVSTRQFI---SHTKDVLSVAFSADNRQ--IVSGSRDKSIKLWNTLAQCK 145
Query: 490 QYIFEG-HEAPVYSV--CPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTT 546
I + H V +V P +++ + I S D +K W N + ++ + T
Sbjct: 146 YTITDDCHTDWVSTVRFSPSNRDPV--IVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNT 203
Query: 547 MAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDD 583
+ S DG+ G + + + K+ + G+D
Sbjct: 204 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGND 240
Score = 55 (24.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 575 NRF-LAAGDDFSIKFWDMDSV--------QLLTSIDADGGLPASPRIRFNKDGCLLAVST 625
NR+ L A SIK WD++ ++ +S + G P + +++DG L
Sbjct: 250 NRYWLCAAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGY 309
Query: 626 NDNGIKILATS 636
DN I++ S
Sbjct: 310 TDNIIRVYQVS 320
>ASPGD|ASPL0000009210 [details] [associations]
symbol:AN4226 species:162425 "Emericella nidulans"
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0032040
"small-subunit processome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003676 EMBL:BN001302 GO:GO:0030529
OMA:CASDRSI InterPro:IPR007287 Pfam:PF04158
ProteinModelPortal:C8V4A4 EnsemblFungi:CADANIAT00004434
Uniprot:C8V4A4
Length = 447
Score = 117 (46.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 49/188 (26%), Positives = 86/188 (45%)
Query: 343 LNQGSSPMSMDFH-PVQ-QTLLLVGTNVGDIGLWEVGSRERLVLRNFKVWDLGACSMPLQ 400
L++ SS S H P T+ V N + + +R ++ ++DL S PL
Sbjct: 180 LSRPSSTPSQTLHWPTSVDTITSVAFNQTETSVLASTGIDRSII----LYDLRTSS-PLS 234
Query: 401 AALVKDPGVSVNRVIWSP-DGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDI 459
++K ++ N V W+P + F VA H V ++ + L+ D HV V D+
Sbjct: 235 KLVLK---LASNAVSWNPMEAFNFAVANEDHNVYMFDMRKMNRALNVLK-D-HVAAVMDV 289
Query: 460 AFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAP-VYSVCPHHKENIQFIFSTA 518
FS ++L +T D+TI++W+ G + I+ V+S +N +++ S +
Sbjct: 290 DFSPTGEEL--VTASYDRTIRLWNRATGHSRDIYHTQRMQRVFSA-KFTPDN-KYVLSGS 345
Query: 519 LDGKIKAW 526
DG I+ W
Sbjct: 346 DDGNIRLW 353
Score = 53 (23.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHAL 902
DN + G DD +I+++ + +S +K +R T L + AL
Sbjct: 337 DNKYVLSGSDDGNIRLWRANASD-RSGIKSARQR-TKLEYDQAL 378
>UNIPROTKB|Q2KJH4 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9913
"Bos taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 EMBL:BC105341
IPI:IPI00716638 RefSeq:NP_001039811.1 UniGene:Bt.59546
ProteinModelPortal:Q2KJH4 STRING:Q2KJH4 PRIDE:Q2KJH4 GeneID:533223
KEGG:bta:533223 CTD:9948 OrthoDB:EOG4WH8KB NextBio:20875962
Uniprot:Q2KJH4
Length = 606
Score = 105 (42.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 51/207 (24%), Positives = 82/207 (39%)
Query: 404 VKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSH 463
+ D G VN V +SPDG+ F A + + IY G++V AH GG+ I++S
Sbjct: 185 ISDHGRFVNCVRFSPDGNRFATASADGQIFIYDGKTGEKVCALGGSKAHDGGIYAISWSP 244
Query: 464 PNKQLCVITCGDDKTIKVWDAT-NGAKQYIFEGHEAPVYSV-CPHHKENIQFIFSTALDG 521
+ L ++ DKT K+WD N G + C K+++ S +L G
Sbjct: 245 DSTHL--LSASGDKTSKIWDVNVNSVVNTFTMGSNVLDQQLGCLWQKDHL---LSISLSG 299
Query: 522 KIKAWLYDNLGSR----VDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKN-R 576
I +L N S+ + + C T+ + + Y G + +T +N
Sbjct: 300 YIN-YLDKNNPSKPLRVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGHINYWDSETGENDS 358
Query: 577 FLAAGDDFSIKFWDMDSVQLLTSIDAD 603
F G + +D L S D
Sbjct: 359 FAGKGHTNQVSRMTVDEHGQLVSCSMD 385
Score = 69 (29.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKS--KLKGHSKRITGLAFSHALNVLVSSGADSQ 913
HP +A+G D ++++Y++ +K KL +T LAFSH L A
Sbjct: 454 HP-GGETVAVGGADGNVRLYSILGTTLKDEGKLLEAKGPVTDLAFSHDGAFLAVCDASKV 512
Query: 914 LCVWS-SDGWEKQKNRF 929
+ V+S +DG+ + N F
Sbjct: 513 VTVFSVADGYS-ENNVF 528
>ZFIN|ZDB-GENE-030131-263 [details] [associations]
symbol:prp19 "PRP19/PSO4 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0043518 "negative regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IGI;IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504
ZFIN:ZDB-GENE-030131-263 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518 InterPro:IPR000772
PROSITE:PS50231 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GeneTree:ENSGT00700000104487 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HSSP:P32523 HOGENOM:HOG000177308
HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG CTD:321544 EMBL:CT990569
EMBL:CABZ01031654 EMBL:BC045954 IPI:IPI00482227 RefSeq:NP_958875.1
UniGene:Dr.150278 STRING:Q7ZV92 Ensembl:ENSDART00000106593
GeneID:321544 KEGG:dre:321544 NextBio:20807418 Uniprot:Q7ZV92
Length = 505
Score = 76 (31.8 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 31/143 (21%), Positives = 50/143 (34%)
Query: 777 GKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMS-ASGGKISLFNXX 835
G T ++W + N S P A+ A S+N Y+ + A + L++
Sbjct: 367 GTGTGDSQIKIWDLKERTNVANFPGHSGPVTAI---AFSENGYYLATGAQDSSLKLWDLR 423
Query: 836 XXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITG 895
Q +A+G D I++Y + HS +TG
Sbjct: 424 KLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSD--IRVYICKQWSEVLNFSDHSGLVTG 481
Query: 896 LAFSHALNVLVSSGADSQLCVWS 918
+AF L S+G D L +S
Sbjct: 482 VAFGEHAQFLASTGMDRSLKFYS 504
Score = 74 (31.1 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 26/88 (29%), Positives = 40/88 (45%)
Query: 442 EVRQHLEI-DAHVGGVN--DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
+V H + A V G+ D+ + NK V+T G DK + V+D +GH
Sbjct: 210 QVGSHAGLHSASVPGILSLDLCPTDTNK---VLTGGADKNVVVFDRREEQIVATLKGHTK 266
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAW 526
V SV H + + +FS + D I+ W
Sbjct: 267 KVSSVIYHPAQAV--VFSASSDSTIRVW 292
Score = 66 (28.3 bits), Expect = 0.00053, Sum P(3) = 0.00053
Identities = 24/91 (26%), Positives = 39/91 (42%)
Query: 545 TTMAYSADGTRTYQGFRKRSLGV--VQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSI-D 601
T +S G Q R V + T + L++ +D F D+ + ++LT + D
Sbjct: 288 TIRVWSVTGGNCVQVVRAHESAVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTD 347
Query: 602 ADGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
G A +F+ DG + T D+ IKI
Sbjct: 348 ETAGC-ALTCAQFHPDGLIFGTGTGDSQIKI 377
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 87 (35.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 31/149 (20%), Positives = 64/149 (42%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
DN+ + G D ++ +++V +V K +GH+ ++ + F+ V++S DS + W
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCW- 136
Query: 919 SDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHFLVVHETQLAIFETTKLECVKQWV 978
D ++ + R S +V H+ + + ++ ++ + +V
Sbjct: 137 -DCRSRRPEPVQTLDEARDGV--SSVKVSDHEILAGSV---DGRVRRYDLRMGQLFSDYV 190
Query: 979 PRESSAPITHATFSCDSQLVYACFLDATV 1007
+PIT FS D Q LD+T+
Sbjct: 191 ----GSPITCTCFSRDGQCTLVSSLDSTL 215
Score = 80 (33.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGH 496
+D G V + F+ + C +TCG DKT+K+W+ G + GH
Sbjct: 21 LDCGQGAVRAVRFN-VDGNYC-LTCGSDKTLKLWNPLRGTLLRTYSGH 66
>DICTYBASE|DDB_G0293070 [details] [associations]
symbol:DDB_G0293070 "TROVE domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR008858
InterPro:IPR015943 Pfam:PF00400 Pfam:PF05731 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50988 SMART:SM00320
dictyBase:DDB_G0293070 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003723 EMBL:AAFI02000199
GO:GO:0005697 KO:K11127 InterPro:IPR025139 Pfam:PF13271
RefSeq:XP_629304.1 ProteinModelPortal:Q54CB5 PRIDE:Q54CB5
EnsemblProtists:DDB0237515 GeneID:8629027 KEGG:ddi:DDB_G0293070
InParanoid:Q54CB5 OMA:LPSDWIE ProtClustDB:CLSZ2429313
Uniprot:Q54CB5
Length = 2430
Score = 96 (38.9 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 33/145 (22%), Positives = 64/145 (44%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYH---GGDEVRQHLEIDAHVGGVNDIAFSHPNKQ 467
VN WSPDG+L + ++I++ D ++ ++ G + FS +KQ
Sbjct: 1653 VNSCCWSPDGTLIASSSWDGTIKIWNPFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQ 1712
Query: 468 LCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWL 527
+ T +D + ++D N K G+ + + C + +I + + D K W
Sbjct: 1713 ILATTMKND--VLLFDV-NSQKLISVMGNHSKSVNHCSLSNDG-NYIVTGSDDATAKVWS 1768
Query: 528 YDNLGSRV-DYEAPGR-WCTTMAYS 550
LG+++ ++ PG W +A+S
Sbjct: 1769 -STLGTQLTNFLIPGDCWANCLAFS 1792
Score = 91 (37.1 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 17/60 (28%), Positives = 38/60 (63%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVK---SKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
++A+G D ++++++V + + +KL GH++ IT + FS + N++ S+ D + VW+
Sbjct: 1797 LLAVGATDCTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIASTSEDLLIKVWN 1856
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 86 (35.3 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
DN+ + G D ++ +++V +V K +GH+ ++ + F+ V++S DS + W
Sbjct: 78 DNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCW 136
Score = 81 (33.6 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGH 496
+D G V + F+ + C +TCG DKT+K+W+ G + GH
Sbjct: 21 LDCSQGAVRAVRFN-VDGNYC-LTCGSDKTLKLWNPLRGTLLRTYSGH 66
>RGD|1559445 [details] [associations]
symbol:Brwd3 "bromodomain and WD repeat domain containing 3"
species:10116 "Rattus norvegicus" [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008360 "regulation of cell shape"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001487
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00297 SMART:SM00320 RGD:1559445 GO:GO:0007010
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775
Gene3D:1.20.920.10 SUPFAM:SSF47370 GeneTree:ENSGT00700000104382
OrthoDB:EOG4X3H0H InterPro:IPR011044 SUPFAM:SSF50969
IPI:IPI00361975 ProteinModelPortal:D3Z8C5
Ensembl:ENSRNOT00000050336 UCSC:RGD:1559445 Uniprot:D3Z8C5
Length = 1799
Score = 112 (44.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 441 DEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPV 500
D+ R + H ++D+A ++ N + +C DK ++VW A + +GH A +
Sbjct: 210 DDGRLLATLRGHSAEISDMAVNYENTLIAAGSC--DKVVRVWCLRTCAPVAVLQGHSASI 267
Query: 501 YSV--CPHHKENIQFIFSTALDGKIKAW 526
S+ CP K +++ ST DG I W
Sbjct: 268 TSIQFCPSTKGTTRYLTSTGADGTICFW 295
Score = 72 (30.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 24/99 (24%), Positives = 46/99 (46%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALN--VLVSSGADSQLCV 916
D +I +++ ++++N ++ L GH + L +H + +++S+G D + +
Sbjct: 435 DTTVIT-AVNNFLLKVWNSVTGQLLHTLSGHDDEVFVLE-AHPFDQRIILSAGHDGNIFI 492
Query: 917 WSSDGWEKQKNRFLQIPTGRTPTAQSDTRVQFHQDQIHF 955
W D K +N F I G+ A D + F D HF
Sbjct: 493 WDLDRGTKIRNYFNMIE-GQGHGAVFDCK--FSPDGNHF 528
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 110 (43.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 27/87 (31%), Positives = 45/87 (51%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATN-GAKQYIFEGHEAPVYSV--CP 505
+DAH VN ++F+ P + + T DKT+ +WD N K + FE H+ ++ V P
Sbjct: 17 VDAHTAEVNCLSFN-PYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 75
Query: 506 HHKENIQFIFSTALDGKIKAWLYDNLG 532
H+ E I + S+ D ++ W +G
Sbjct: 76 HN-ETI--LASSGTDRRLNVWDLSKIG 99
Score = 39 (18.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 8/33 (24%), Positives = 20/33 (60%)
Query: 705 RITEESNDKSKVWKLTELSEPNQCRSLRLPENL 737
+I++ S + ++ W + +SE N + ++ EN+
Sbjct: 124 KISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 156
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 122 (48.0 bits), Expect = 0.00056, P = 0.00056
Identities = 58/234 (24%), Positives = 90/234 (38%)
Query: 411 VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCV 470
V RVI+ P S+ A ++++ + GD R + H V DI+F H K L
Sbjct: 111 VTRVIFHPVFSVIVSASEDATIKVWDHETGDFERT---LKGHTDSVQDISFDHTGKLLA- 166
Query: 471 ITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+C D TIK+WD GH+ V SV N I S + D IK W
Sbjct: 167 -SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAI--MPNGDHIVSASRDKTIKMWEVAT 223
Query: 531 LGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKF-- 588
+ W + + DGT +++ V T + + + ++
Sbjct: 224 GYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECIS 283
Query: 589 WDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATSDGIRLL 642
W +S T ++A G S + K G L + D IK+ S G+ L+
Sbjct: 284 WAPESAHP-TILEATG----SETKKSGKPGPFLLSGSRDKTIKMWDVSIGMCLM 332
Score = 84 (34.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 449 IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHK 508
+ H V + F HP + +++ +D TIKVWD G + +GH V + H
Sbjct: 104 LSGHRSPVTRVIF-HPVFSV-IVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHT 161
Query: 509 ENIQFIFSTALDGKIKAW 526
+ + S + D IK W
Sbjct: 162 GKL--LASCSADMTIKLW 177
Score = 84 (34.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 29/111 (26%), Positives = 53/111 (47%)
Query: 555 RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRF 614
RT G ++ V + ++A D +IK W++ + + + G +R
Sbjct: 186 RTMHG-HDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFT--GHREWVRMVRP 242
Query: 615 NKDGCLLAVSTNDNGIKI--LATSDGIRLLRTFENLAYDASRTSENSKPTI 663
N+DG L+A S+ND +++ +AT + LR E++ S E++ PTI
Sbjct: 243 NQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTI 293
>MGI|MGI:95785 [details] [associations]
symbol:Gnb3 "guanine nucleotide binding protein (G protein),
beta 3" species:10090 "Mus musculus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0044297 "cell
body" evidence=ISO] [GO:0051020 "GTPase binding" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 MGI:MGI:95785 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003924 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186 GO:GO:0004871
EMBL:AC002397 PRINTS:PR00319 GO:GO:0005834
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784
KO:K07825 OMA:NMCSIYS OrthoDB:EOG4J118C EMBL:AK014789 EMBL:BC018239
EMBL:U38494 IPI:IPI00116938 RefSeq:NP_038558.1 UniGene:Mm.68889
ProteinModelPortal:Q61011 SMR:Q61011 STRING:Q61011
PhosphoSite:Q61011 PaxDb:Q61011 PRIDE:Q61011
Ensembl:ENSMUST00000024206 GeneID:14695 KEGG:mmu:14695
InParanoid:Q61011 NextBio:286643 Bgee:Q61011 Genevestigator:Q61011
GermOnline:ENSMUSG00000023439 Uniprot:Q61011
Length = 340
Score = 100 (40.3 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 31/114 (27%), Positives = 49/114 (42%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGD-EVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
++P G+ ++ IY+ + V+ E+ AH G ++ F N ++T
Sbjct: 105 YAPSGNFVACGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSCCRFLDDNN---IVTSS 161
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYS--VCPHHKENIQFIFSTALDGKIKAW 526
D T +WD G ++ +F GH S V P +K FI S A D K W
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYK---LFI-SGACDASAKLW 211
Score = 56 (24.8 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGA-DSQLCVWS 918
++ G DD + +++ E L GH R++ L + A + V++G+ DS L +W+
Sbjct: 284 LLFAGYDDFNCNVWDSLKCERVGILSGHDNRVSCLGVT-ADGMAVATGSWDSFLKIWN 340
Score = 51 (23.0 bits), Expect = 0.00056, Sum P(3) = 0.00056
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 552 DGT--RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPAS 609
+GT +T+ G + + + F DD S + +D+ + Q LT+ + +
Sbjct: 215 EGTCRQTFTG-HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQESIICGI 273
Query: 610 PRIRFNKDGCLLAVSTND 627
+ F+ G LL +D
Sbjct: 274 TSVAFSLSGRLLFAGYDD 291
>UNIPROTKB|Q9UMS4 [details] [associations]
symbol:PRPF19 "Pre-mRNA-processing factor 19" species:9606
"Homo sapiens" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0001833 "inner cell mass cell proliferation"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0008610 "lipid biosynthetic process" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0048026 "positive regulation of mRNA splicing, via spliceosome"
evidence=IEA] [GO:0048711 "positive regulation of astrocyte
differentiation" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000974 "Prp19 complex" evidence=IDA] [GO:0000209
"protein polyubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=IDA] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000245 "spliceosomal complex assembly" evidence=IMP]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003613
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0003677 GO:GO:0016607 GO:GO:0006281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR000772
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0000209 GO:GO:0071013
GO:GO:0000151 GO:GO:0000245 GO:GO:0034450 GO:GO:0000974 KO:K10599
InterPro:IPR013915 Pfam:PF08606 HOGENOM:HOG000177308 OMA:QWQELKV
CTD:27339 HOVERGEN:HBG053697 OrthoDB:EOG4V6ZGG EMBL:AJ131186
EMBL:BC008719 EMBL:BC018665 EMBL:BC018698 IPI:IPI00004968
RefSeq:NP_055317.1 UniGene:Hs.502705 ProteinModelPortal:Q9UMS4
SMR:Q9UMS4 IntAct:Q9UMS4 MINT:MINT-1454442 STRING:Q9UMS4
PhosphoSite:Q9UMS4 DMDM:55976619 REPRODUCTION-2DPAGE:IPI00004968
SWISS-2DPAGE:Q9UMS4 PaxDb:Q9UMS4 PeptideAtlas:Q9UMS4 PRIDE:Q9UMS4
DNASU:27339 Ensembl:ENST00000227524 GeneID:27339 KEGG:hsa:27339
UCSC:uc001nqf.3 GeneCards:GC11M060658 HGNC:HGNC:17896 HPA:CAB012448
MIM:608330 neXtProt:NX_Q9UMS4 PharmGKB:PA134941355
InParanoid:Q9UMS4 PhylomeDB:Q9UMS4 GenomeRNAi:27339 NextBio:50404
ArrayExpress:Q9UMS4 Bgee:Q9UMS4 CleanEx:HS_PRPF19
Genevestigator:Q9UMS4 GermOnline:ENSG00000110107 Uniprot:Q9UMS4
Length = 504
Score = 89 (36.4 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 38/158 (24%), Positives = 64/158 (40%)
Query: 779 ATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASGGKISLFNXXXXX 838
A+ ++W P+ + V ++ E AV +L Y++S+S + F+
Sbjct: 282 ASPDATIRIWSVPNASCV--QVVRAH-ESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTG 338
Query: 839 XXXXXXXXXXXXXXXX---XHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITG 895
HP D I G DS I+I++++ + GHS IT
Sbjct: 339 RVLTKVTDETSGCSLTCAQFHP-DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITS 397
Query: 896 LAFSHALNVLVSSGADSQLCVWSSDGWEKQKN-RFLQI 932
+AFS L ++ DS + +W K KN + LQ+
Sbjct: 398 IAFSENGYYLATAADDSSVKLWDL---RKLKNFKTLQL 432
Score = 83 (34.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 26/92 (28%), Positives = 45/92 (48%)
Query: 442 EVRQHLEI-DAHVGGVN--DIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEA 498
+V H+ + A + G+ D+ S NK ++T G DK + V+D ++ +GH
Sbjct: 209 QVASHVGLHSASIPGILALDLCPSDTNK---ILTGGADKNVVVFDKSSEQILATLKGHTK 265
Query: 499 PVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
V SV H +++ +FS + D I+ W N
Sbjct: 266 KVTSVVFHPSQDL--VFSASPDATIRIWSVPN 295
Score = 72 (30.4 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 31/143 (21%), Positives = 50/143 (34%)
Query: 777 GKATASVAPQLWQPPSGIMMTNDVTDSNPEEAVPCFALSKNDSYVMSASG-GKISLFNXX 835
G T ++W + N S P + A S+N Y+ +A+ + L++
Sbjct: 366 GTGTMDSQIKIWDLKERTNVANFPGHSGP---ITSIAFSENGYYLATAADDSSVKLWDLR 422
Query: 836 XXXXXXXXXXXXXXXXXXXXHPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITG 895
Q +A+G D +QIY + HS TG
Sbjct: 423 KLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTD--VQIYICKQWTEILHFTEHSGLTTG 480
Query: 896 LAFSHALNVLVSSGADSQLCVWS 918
+AF H + S+G D L +S
Sbjct: 481 VAFGHHAKFIASTGMDRSLKFYS 503
Score = 60 (26.2 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 573 TKNRFLAAGDDFSIKFWDMDSVQLLTSI-DADGGLPASPRIRFNKDGCLLAVSTNDNGIK 631
T + L++ DD F D+ + ++LT + D G + +F+ DG + T D+ IK
Sbjct: 317 TGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCA-QFHPDGLIFGTGTMDSQIK 375
Query: 632 I 632
I
Sbjct: 376 I 376
>TAIR|locus:2008159 [details] [associations]
symbol:RACK1B_AT "AT1G48630" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0048364 "root development"
evidence=IGI] [GO:0048367 "shoot system development" evidence=IGI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006417 "regulation of translation" evidence=IGI]
[GO:0009845 "seed germination" evidence=IGI] [GO:0042254 "ribosome
biogenesis" evidence=IGI] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0001510 "RNA methylation"
evidence=RCA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide biosynthetic
process" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0042545 "cell wall modification"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0006417 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0042254 GO:GO:0048364 GO:GO:0009845 GO:GO:0004871
GO:GO:0071215 GO:GO:0048367 GO:GO:0022626 EMBL:AC073555 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AC074308 EMBL:AY059723 EMBL:AY091352 EMBL:AY087855 EMBL:Z26552
IPI:IPI00531991 RefSeq:NP_175296.1 UniGene:At.17343
ProteinModelPortal:Q9C4Z6 SMR:Q9C4Z6 IntAct:Q9C4Z6 STRING:Q9C4Z6
PaxDb:Q9C4Z6 PRIDE:Q9C4Z6 EnsemblPlants:AT1G48630.1 GeneID:841284
KEGG:ath:AT1G48630 GeneFarm:2979 TAIR:At1g48630 InParanoid:Q9C4Z6
OMA:NCKLRNT PhylomeDB:Q9C4Z6 Genevestigator:Q9C4Z6 Uniprot:Q9C4Z6
Length = 326
Score = 113 (44.8 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 39/152 (25%), Positives = 64/152 (42%)
Query: 411 VNRVIWSPDGSLFGVAYSRH-IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
V V+ S DG F ++ S ++++ G+ R+ + H V +AFS N+Q
Sbjct: 66 VQDVVLSSDGQ-FALSGSWDGELRLWDLATGESTRRFV---GHTKDVLSVAFSTDNRQ-- 119
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKEN--IQFIFSTALDGKIKAWL 527
+++ D+TIK+W+ K I E + C N + I S + D +K W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWN 179
Query: 528 YDNLGSRVDYEAPGRWCTTMAYSADGTRTYQG 559
N R + T+A S DG+ G
Sbjct: 180 LQNCKLRNTLAGHSGYLNTVAVSPDGSLCASG 211
Score = 52 (23.4 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 575 NRF-LAAGDDFSIKFWDMDSVQLLTSIDAD 603
NR+ L A + SI+ WD++S ++ + D
Sbjct: 245 NRYWLCAATENSIRIWDLESKSVVEDLKVD 274
>TAIR|locus:2194060 [details] [associations]
symbol:ATARCA "AT1G18080" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006417
"regulation of translation" evidence=IGI] [GO:0009845 "seed
germination" evidence=IGI] [GO:0042254 "ribosome biogenesis"
evidence=IGI] [GO:0071215 "cellular response to abscisic acid
stimulus" evidence=IEP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006096
"glycolysis" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] [GO:0009651 "response to salt
stress" evidence=RCA] [GO:0009739 "response to gibberellin
stimulus" evidence=IEP] [GO:0010476 "gibberellin mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009507 GO:GO:0046686 GO:GO:0006417 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042254 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0022626 EMBL:AC034107
EMBL:AC069551 EMBL:U77381 EMBL:AY035007 EMBL:AY063016 EMBL:AK318781
EMBL:AY088480 IPI:IPI00524816 IPI:IPI00930983 RefSeq:NP_173248.1
UniGene:At.22612 UniGene:At.67882 PDB:3DM0 PDBsum:3DM0
ProteinModelPortal:O24456 SMR:O24456 IntAct:O24456 STRING:O24456
PaxDb:O24456 PRIDE:O24456 EnsemblPlants:AT1G18080.1 GeneID:838388
KEGG:ath:AT1G18080 GeneFarm:2809 TAIR:At1g18080
HOGENOM:HOG000091643 InParanoid:O24456 KO:K14753 OMA:IRVWQVM
PhylomeDB:O24456 ProtClustDB:CLSN2682135 EvolutionaryTrace:O24456
Genevestigator:O24456 GermOnline:AT1G18080 GO:GO:0010476
Uniprot:O24456
Length = 327
Score = 110 (43.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 43/153 (28%), Positives = 67/153 (43%)
Query: 411 VNRVIWSPDGSLFGVAYSRH-IVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLC 469
V V+ S DG F ++ S ++++ G R+ + H V +AFS N+Q
Sbjct: 66 VEDVVLSSDGQ-FALSGSWDGELRLWDLAAGVSTRRFV---GHTKDVLSVAFSLDNRQ-- 119
Query: 470 VITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV-CPHHKEN-IQ-FIFSTALDGKIKAW 526
+++ D+TIK+W+ K I EG E V C N +Q I S + D +K W
Sbjct: 120 IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 179
Query: 527 LYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQG 559
N R + +T+A S DG+ G
Sbjct: 180 NLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 212
Score = 55 (24.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 551 ADGTRTYQGFRKRSLGVVQFDTTKNRF-LAAGDDFSIKFWDMDSVQLLTSIDAD 603
A+G + Y + + F + NR+ L A + IK WD++S ++ + D
Sbjct: 224 AEGKKLYSLEANSVIHALCF--SPNRYWLCAATEHGIKIWDLESKSIVEDLKVD 275
>DICTYBASE|DDB_G0277143 [details] [associations]
symbol:gpbA "G protein b" species:44689
"Dictyostelium discoideum" [GO:0019933 "cAMP-mediated signaling"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0032320 "positive regulation
of Ras GTPase activity" evidence=IMP] [GO:0008047 "enzyme activator
activity" evidence=TAS] [GO:0031682 "G-protein gamma-subunit
binding" evidence=IDA] [GO:0007188 "adenylate cyclase-modulating
G-protein coupled receptor signaling pathway" evidence=IDA]
[GO:0005834 "heterotrimeric G-protein complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030826 "regulation
of cGMP biosynthetic process" evidence=TAS] [GO:0007190 "activation
of adenylate cyclase activity" evidence=TAS] [GO:0046578
"regulation of Ras protein signal transduction" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043327 "chemotaxis to cAMP"
evidence=IMP] [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0031152 "aggregation involved in sorocarp development"
evidence=IMP;TAS] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0006935 "chemotaxis" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277143 InterPro:IPR001632
GO:GO:0045335 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0019933 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007190 GO:GO:0007188
GenomeReviews:CM000151_GR GO:GO:0043326 GO:GO:0004871
EMBL:AAFI02000019 GO:GO:0031152 PRINTS:PR00319 GO:GO:0005834
GO:GO:0043327 GO:GO:0030826 GO:GO:0032320 InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:X73641 PIR:A47370 RefSeq:XP_642759.1
ProteinModelPortal:P36408 SMR:P36408 IntAct:P36408 STRING:P36408
PRIDE:P36408 EnsemblProtists:DDB0252679 GeneID:8620948
KEGG:ddi:DDB_G0277143 OMA:YTHDNIL ProtClustDB:CLSZ2430844
GO:GO:0031682 Uniprot:P36408
Length = 347
Score = 108 (43.1 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 36/139 (25%), Positives = 60/139 (43%)
Query: 389 VWDLGACSMPLQAALVKDPGVSVNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDE-VRQHL 447
VWD G + + A ++ V +SP + +I IY+ ++ +R
Sbjct: 88 VWD-GLTTNKVHAIPLRSSWVMT--CAYSPTANFVACGGLDNICSIYNLRSREQPIRVCR 144
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHH 507
E+++H G ++ F + ++Q ++T D T +WD NG K F H V SV
Sbjct: 145 ELNSHTGYLSCCRFLN-DRQ--IVTSSGDMTCILWDVENGTKITEFSDHNGDVMSVSVSP 201
Query: 508 KENIQFIFSTALDGKIKAW 526
+N + S A D K W
Sbjct: 202 DKN--YFISGACDATAKLW 218
Score = 58 (25.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 576 RFLAAG-DDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILA 634
RFL AG DDF+ WD + + S+ G + + DG L + D+ +KI A
Sbjct: 290 RFLFAGYDDFTCNVWDTLKGERVLSLTGHGNRVSC--LGVPTDGMALCTGSWDSLLKIWA 347
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 89 (36.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 27/87 (31%), Positives = 40/87 (45%)
Query: 452 HVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSV--CPHHKE 509
H G V AF+ P L +++C +D TI++W + + GH PV+ V PH
Sbjct: 449 HTGPVYRCAFA-PEMNL-LLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPH--- 503
Query: 510 NIQFIFSTALDGKIKAWLYD-NLGSRV 535
F+ S + D + W D N RV
Sbjct: 504 GYYFV-SCSYDKTARLWATDSNQALRV 529
Score = 86 (35.3 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 18/67 (26%), Positives = 34/67 (50%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLC 915
HP ++N +A G D ++++++ + + GH ++ LAFS L S D +
Sbjct: 543 HP-NSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNII 601
Query: 916 VWS-SDG 921
+W S+G
Sbjct: 602 IWDLSNG 608
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 85 (35.0 bits), Expect = 0.00067, Sum P(2) = 0.00066
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
DN+ + G D ++ +++V +V K +GH+ ++ + F+ V++S DS + W
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCW 136
Score = 81 (33.6 bits), Expect = 0.00067, Sum P(2) = 0.00066
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 440 GDEVRQ-HLE-IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGH 496
G E+ Q L+ +D G V + F+ + C +TCG DKT+K+W+ G + GH
Sbjct: 10 GPELPQKRLKTLDCGQGAVRAVRFN-VDGNYC-LTCGSDKTLKLWNPLRGTLLRTYSGH 66
>UNIPROTKB|B4KKN1 [details] [associations]
symbol:GI17814 "Ribosome biogenesis protein WDR12 homolog"
species:7230 "Drosophila mojavensis" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH933807
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 OrthoDB:EOG4BNZTB HAMAP:MF_03029 RefSeq:XP_002003253.1
ProteinModelPortal:B4KKN1 EnsemblMetazoa:FBtr0168539 GeneID:6577286
KEGG:dmo:Dmoj_GI17814 FlyBase:FBgn0140555 InParanoid:B4KKN1
Uniprot:B4KKN1
Length = 419
Score = 97 (39.2 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 47/210 (22%), Positives = 86/210 (40%)
Query: 432 VQIYSYHGGDEVRQHLEIDAHVGGVNDIAF-SHPNKQLCVITCGDDKTIKVWD---ATNG 487
+ I++Y G + L I H + + + S N+ ++ D+T +W A+N
Sbjct: 127 LNIWTYKG----KHKLTIPGHTAPIKAVDWISLDNENGRFVSTSQDQTAMMWQWNIASNA 182
Query: 488 AKQY-IFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDNLGSRVDYEAPGRWCTT 546
+ + +GHE V SVC + Q + + D +K W + E G T
Sbjct: 183 VECVSVCKGHERGVDSVCV--SPDAQRFATGSWDTMLKIW-------SAELEDAGE-STA 232
Query: 547 MAYSADGTRT----YQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDA 602
G RT QG R+ S+ VQ+ N L D ++K WD++ + T I
Sbjct: 233 KRAKESGVRTPRMTLQGHRE-SISAVQW-MDNNTLLTGSWDHTLKVWDLNLEGIKTEIST 290
Query: 603 DGGLPASPRIRFNKDGCLLAVSTNDNGIKI 632
+ + + + N L+ ++ D +++
Sbjct: 291 NKSIFDASHSKLNN---LIVTASADKNLRL 317
Score = 72 (30.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 856 HPQDNNIIAIGMDDSSIQIYNVRVDE---VKSKLKGHSKRITGLAFSHALNVLVSSGA-D 911
H + NN+I D ++++Y+ R ++ V+S GH+ + + +S L SGA D
Sbjct: 299 HSKLNNLIVTASADKNLRLYDARTNQGSVVRSTYLGHNAWVQTVMWSITEEFLFVSGAYD 358
Query: 912 SQLCVW 917
+Q +W
Sbjct: 359 NQNKLW 364
>ZFIN|ZDB-GENE-020419-34 [details] [associations]
symbol:dtl "denticleless homolog (Drosophila)"
species:7955 "Danio rerio" [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IMP] [GO:0006513 "protein monoubiquitination"
evidence=ISS] [GO:0005813 "centrosome" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=IEA;ISS] [GO:0031465
"Cul4B-RING ubiquitin ligase complex" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0000209 "protein
polyubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0009411 "response to UV"
evidence=ISS] [GO:0031464 "Cul4A-RING ubiquitin ligase complex"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 ZFIN:ZDB-GENE-020419-34 GO:GO:0005634
GO:GO:0005737 GO:GO:0005813 GO:GO:0007095 GO:GO:0009411
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006511 GO:GO:0000209 GO:GO:0006513
GO:GO:0031464 GO:GO:0031465 GO:GO:0019985 HOVERGEN:HBG057737
KO:K11790 CTD:51514 GeneTree:ENSGT00530000064210
HOGENOM:HOG000112290 OrthoDB:EOG4N5VWH EMBL:AF506212 EMBL:BX511163
EMBL:BX510324 EMBL:BC045316 IPI:IPI00505024 RefSeq:NP_775348.1
UniGene:Dr.3526 ProteinModelPortal:Q5RHI5 STRING:Q5RHI5
Ensembl:ENSDART00000034098 GeneID:192314 KEGG:dre:192314
InParanoid:Q5RHI5 OMA:HENAVFD NextBio:20797151 Bgee:Q5RHI5
Uniprot:Q5RHI5
Length = 647
Score = 109 (43.4 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 47/158 (29%), Positives = 72/158 (45%)
Query: 448 EIDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHH 507
E AH V DIA+ P C++T D+T ++WD G F+GH+ + SV +
Sbjct: 92 EWQAHDNAVFDIAWV-PGTN-CLVTASGDQTARLWDVITGDLLGTFKGHQCSLKSVAFYK 149
Query: 508 KENIQFIFSTA-LDGKIKAWLYDNLGSRVD--Y----EAPGRWCTTMAYSADGTRTYQGF 560
+E +FST DG I W D S+ D Y + G ++ T+ +G
Sbjct: 150 QEKA--VFSTGGRDGNIMIW--DTRCSKKDGFYRQVKQISGAHMKPERFTPQ-TKKRRGM 204
Query: 561 R-----KRSLGVVQF-DTTKNRFLAAGD-DFSIKFWDM 591
++ + VV F D TK +++G D IK WD+
Sbjct: 205 APPVDSQQGVTVVLFCDETK--LISSGAVDGIIKMWDL 240
Score = 66 (28.3 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 16/75 (21%), Positives = 36/75 (48%)
Query: 859 DNNIIAIGMDDSSIQIYNVR-VDEVKSKLKGHSKRITGLAFSHA-LNVLVSSGADSQLCV 916
D+ +A G D ++ I+ + + L+GHS+ +T +A+ + S D+ + +
Sbjct: 323 DDQFLASGSSDHNVYIWKISDPKQAPMMLQGHSQEVTSVAWCPTDFTKIASCSDDNTVRI 382
Query: 917 WSSDGWEKQKNRFLQ 931
W + + +N +Q
Sbjct: 383 WRLNRKPEGENSTIQ 397
Score = 42 (19.8 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 974 VKQWVPRESSAPITHA 989
++QW+ R S +P+ A
Sbjct: 476 LQQWISRSSKSPVRKA 491
>ZFIN|ZDB-GENE-030131-823 [details] [associations]
symbol:gnb1a "guanine nucleotide binding protein (G
protein), beta polypeptide 1a" species:7955 "Danio rerio"
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632
ZFIN:ZDB-GENE-030131-823 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871 PRINTS:PR00319
GeneTree:ENSGT00550000074331 HOGENOM:HOG000176356
HOVERGEN:HBG000188 KO:K04536 OrthoDB:EOG4HX51D InterPro:IPR016346
PIRSF:PIRSF002394 EMBL:BC056708 EMBL:BC071277 IPI:IPI00506088
RefSeq:NP_997774.1 UniGene:Dr.75526 ProteinModelPortal:Q6PH57
SMR:Q6PH57 STRING:Q6PH57 PRIDE:Q6PH57 Ensembl:ENSDART00000130104
GeneID:322104 KEGG:dre:322104 CTD:322104 InParanoid:Q6PH57
NextBio:20807673 Bgee:Q6PH57 Uniprot:Q6PH57
Length = 340
Score = 91 (37.1 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 29/112 (25%), Positives = 46/112 (41%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGD-EVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
++P G+ +I IY+ + VR E+ H G ++ F N+ ++T
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ---IVTSS 161
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D T +WD G + F GH V S+ + F+ S A D K W
Sbjct: 162 GDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRL-FV-SGACDASAKLW 211
Score = 60 (26.2 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 17/73 (23%), Positives = 31/73 (42%)
Query: 555 RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRF 614
+T+ G + + + F N F DD + + +D+ + Q L D + + F
Sbjct: 220 QTFTG-HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMVYSHDNIICGITSVAF 278
Query: 615 NKDGCLLAVSTND 627
+K G LL +D
Sbjct: 279 SKSGRLLLAGYDD 291
Score = 56 (24.8 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 14/62 (22%), Positives = 31/62 (50%)
Query: 858 QDNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGA-DSQLCV 916
+ ++ G DD + +++ + L GH R++ L + + V++G+ DS L +
Sbjct: 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDD-GMAVATGSWDSFLKI 338
Query: 917 WS 918
W+
Sbjct: 339 WN 340
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 85 (35.0 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVW 917
DN+ + G D ++ +++V +V K +GH+ ++ + F+ V++S DS + W
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCW 136
Score = 81 (33.6 bits), Expect = 0.00069, Sum P(2) = 0.00069
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 440 GDEVRQ-HLE-IDAHVGGVNDIAFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGH 496
G E+ Q L+ +D G V + F+ + C +TCG DKT+K+W+ G + GH
Sbjct: 10 GPELPQKRLKTLDCGQGAVRAVRFN-VDGNYC-LTCGSDKTLKLWNPLRGTLLRTYSGH 66
>UNIPROTKB|E1BB14 [details] [associations]
symbol:GNB3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051020 "GTPase binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 GeneTree:ENSGT00550000074331
InterPro:IPR016346 PIRSF:PIRSF002394 CTD:2784 KO:K07825 OMA:NMCSIYS
EMBL:DAAA02014455 IPI:IPI00703992 RefSeq:NP_001179276.1
UniGene:Bt.16171 ProteinModelPortal:E1BB14
Ensembl:ENSBTAT00000021348 GeneID:513340 KEGG:bta:513340
NextBio:20870819 Uniprot:E1BB14
Length = 340
Score = 101 (40.6 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 27/112 (24%), Positives = 46/112 (41%)
Query: 416 WSPDGSLFGVAYSRHIVQIYSYHGGD-EVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCG 474
++P G+ ++ IYS + V+ E+ AH G ++ F N ++T
Sbjct: 105 YAPSGNFVACGGLDNMCSIYSLKSREGNVKVSRELSAHTGYLSCCRFLDDNN---IVTSS 161
Query: 475 DDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAW 526
D T +WD G ++ +F GH S+ + + S A D K W
Sbjct: 162 GDTTCALWDIETGQQKTVFVGHTGDCMSLAV--SPDFRLFISGACDASAKLW 211
Score = 57 (25.1 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 16/58 (27%), Positives = 31/58 (53%)
Query: 862 IIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGA-DSQLCVWS 918
++ G DD + +++ E L GH R++ L + A + V++G+ DS L +W+
Sbjct: 284 LLFAGYDDFNCNVWDSMKCERVGILSGHDNRVSCLGVT-ADGMAVATGSWDSFLKIWN 340
Score = 48 (22.0 bits), Expect = 0.00070, Sum P(3) = 0.00070
Identities = 17/78 (21%), Positives = 33/78 (42%)
Query: 552 DGT--RTYQGFRKRSLGVVQFDTTKNRFLAAGDDFSIKFWDMDSVQLLTSIDADGGLPAS 609
+GT +T+ G + + + F DD S + +D+ + Q LT+ + +
Sbjct: 215 EGTCRQTFTG-HESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTTYAHESIICGI 273
Query: 610 PRIRFNKDGCLLAVSTND 627
+ F+ G LL +D
Sbjct: 274 TSVAFSLSGRLLFAGYDD 291
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 119 (46.9 bits), Expect = 0.00072, P = 0.00072
Identities = 48/195 (24%), Positives = 85/195 (43%)
Query: 401 AALVKDPGVSVNRVIWSP-DGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDI 459
A+++ D V V+WSP + +L +Y + ++IY D H I H V +
Sbjct: 128 ASVLTDHSQDVKHVVWSPKENALVSASYD-NTIKIYKEVDDDWECSHTLI-GHESTVWSL 185
Query: 460 AFSHPNKQLCVITCGDDKTIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTAL 519
+F H + +L V +CGDDK +K+W + + ++ +H I + + L
Sbjct: 186 SF-HSSGELFV-SCGDDKVLKIWKCLKSGPSDV---KWISICTIAGYHNRPIYDVDWSKL 240
Query: 520 DGKIKAWLYDNLGSRVDYEAPGRWCTTMAYSADGTRTYQGFRKRSLGVVQFDTTKNRFLA 579
+ KI D+ R+ + R +++ YQ + VV++ + LA
Sbjct: 241 NNKIATACGDD-AIRI-FSIV-RITISISNQLLFIAYYQA-HNHDVNVVRWHPKVDNILA 296
Query: 580 AG-DDFSIKFWDMDS 593
+G DD IK W + S
Sbjct: 297 SGSDDNCIKIWKVHS 311
>MGI|MGI:2443143 [details] [associations]
symbol:Wdr3 "WD repeat domain 3" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:2443143 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR007148
Pfam:PF04003 GeneTree:ENSGT00550000074925 HOGENOM:HOG000212524
KO:K14556 OMA:SIFAHDD HSSP:Q02793 CTD:10885 HOVERGEN:HBG013192
OrthoDB:EOG412M4S EMBL:AK050738 EMBL:AK050797 EMBL:BC063100
IPI:IPI00221822 RefSeq:NP_780761.1 UniGene:Mm.24591
ProteinModelPortal:Q8BHB4 SMR:Q8BHB4 STRING:Q8BHB4
PhosphoSite:Q8BHB4 PaxDb:Q8BHB4 PRIDE:Q8BHB4
Ensembl:ENSMUST00000052120 GeneID:269470 KEGG:mmu:269470
UCSC:uc008qqo.2 InParanoid:Q8BHB4 NextBio:392854 Bgee:Q8BHB4
Genevestigator:Q8BHB4 Uniprot:Q8BHB4
Length = 942
Score = 93 (37.8 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 38/173 (21%), Positives = 71/173 (41%)
Query: 363 LVGTNVGDIGLWEV-GSRERLVL----RNFKVWDLGACSMPLQAALVKDPGVSVNRVIWS 417
L+G+ G+I + G + R V + +WDL L +++ V + S
Sbjct: 18 LIGSQKGNIVFVTLRGEKGRYVAVPACEHVFIWDLRKGEKIL---ILQGNKQEVTCLCPS 74
Query: 418 PDGSLFGVAYSRHIVQIYSYHGGDEVRQHLEIDAHVGGVNDIAFSHPNKQLCVITCGDDK 477
PDG V Y ++I+S G+ ++ + H V + + +L + D
Sbjct: 75 PDGLHLAVGYEDGAIRIFSLLSGEG---NITFNGHKAAVTSLKYDQLGGRLA--SGSKDT 129
Query: 478 TIKVWDATNGAKQYIFEGHEAPVYSVCPHHKENIQFIFSTALDGKIKAWLYDN 530
+ +WD N + Y +GH+ V + N+ + ++ D +K W DN
Sbjct: 130 DVIIWDVINESGLYRLKGHKDAVTQALFLRERNL--LVTSGKDTMVKWWDLDN 180
Score = 69 (29.3 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 859 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHSKRITGLAFSHALNVLVSSGADSQLCVWS 918
D +IA G D +++I+ + + L H + L F ++ ++G D ++ W
Sbjct: 601 DGALIATGSADRNVKIWGLDFGDCHRSLFAHDDSVMYLRFVPKSHLFFTAGKDHKIKQWD 660
Query: 919 SDGWE 923
+D +E
Sbjct: 661 ADKFE 665
Score = 61 (26.5 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 577 FLAAGDDFSIKFWDMDSVQLLTSIDADGGLPASPRIRFNKDGCLLAVSTNDNGIKILATS 636
F+ G D ++KFWD + V S + + ++ ++D +L VS + N K+LA S
Sbjct: 510 FVTGGADKAVKFWDFELVTDKNSTQKRLSVKQTRTLQLDED--VLCVSYSPNQ-KLLAVS 566
WARNING: HSPs involving 18 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1102 1041 0.00082 123 3 11 22 0.42 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 268
No. of states in DFA: 629 (67 KB)
Total size of DFA: 516 KB (2237 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 93.25u 0.10s 93.35t Elapsed: 00:00:04
Total cpu time: 93.31u 0.10s 93.41t Elapsed: 00:00:04
Start: Sat May 11 10:31:06 2013 End: Sat May 11 10:31:10 2013
WARNINGS ISSUED: 2