Your job contains 1 sequence.
>001314
MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCM
SDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQ
ITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKS
SKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLS
VSHHGPRHSNYFRGATLNEDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVSTQIPLEG
LVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTN
GPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISD
ILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECM
YPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLS
YITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKAL
EEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALK
HLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLR
LQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSDV
KCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQAL
GKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSL
IGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDLDDDTVSETSSTFSGMSVY
TTGSSTRKSSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGAKQ
ELKSLVVFLVMLGEVDTARKLQDTGETFQLSQMAAIKLAEDTMSIDIINEHAHNMERYVQ
IVKLESQNSEAFSWRSKVFLSP
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001314
(1102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173199 - symbol:ABO1 "ABA-OVERLY SENSITIVE 1"... 3230 0. 1
UNIPROTKB|F1SP27 - symbol:IKBKAP "Uncharacterized protein... 502 1.7e-77 3
UNIPROTKB|O95163 - symbol:IKBKAP "Elongator complex prote... 478 6.4e-75 3
UNIPROTKB|Q8WND5 - symbol:IKBKAP "Elongator complex prote... 463 1.3e-70 3
MGI|MGI:1914544 - symbol:Ikbkap "inhibitor of kappa light... 492 3.4e-70 3
UNIPROTKB|E1BBQ3 - symbol:LOC505465 "Uncharacterized prot... 426 7.2e-69 3
RGD|620072 - symbol:Ikbkap "inhibitor of kappa light poly... 469 7.6e-66 3
UNIPROTKB|F5H2T0 - symbol:IKBKAP "Elongator complex prote... 478 6.1e-65 3
DICTYBASE|DDB_G0284075 - symbol:elp1 "elongation protein ... 588 4.9e-62 2
SGD|S000004376 - symbol:IKI3 "Subunit of Elongator comple... 499 3.4e-58 2
UNIPROTKB|Q2TAQ1 - symbol:ikbkap "Putative elongator comp... 456 4.0e-52 2
ASPGD|ASPL0000074831 - symbol:AN10551 species:162425 "Eme... 345 4.9e-52 4
FB|FBgn0037926 - symbol:Elp1 "Elongator complex protein 1... 337 2.3e-49 4
POMBASE|SPBC36.07 - symbol:elp1 "elongator subunit Elp1 (... 308 3.0e-49 3
UNIPROTKB|G4MTL1 - symbol:MGG_07174 "Elongator complex pr... 418 6.2e-49 3
WB|WBGene00022463 - symbol:elpc-1 species:6239 "Caenorhab... 180 2.4e-15 3
UNIPROTKB|F1P5L4 - symbol:IKBKAP "Uncharacterized protein... 154 2.5e-07 1
>TAIR|locus:2173199 [details] [associations]
symbol:ABO1 "ABA-OVERLY SENSITIVE 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0032784 "regulation of DNA-dependent transcription, elongation"
evidence=ISS] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0035265 "organ growth" evidence=IMP] [GO:0009787 "regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0071215
"cellular response to abscisic acid stimulus" evidence=IMP]
[GO:0006979 "response to oxidative stress" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0009737 "response to abscisic acid stimulus"
evidence=IMP] [GO:0031538 "negative regulation of anthocyanin
metabolic process" evidence=IMP] [GO:2000024 "regulation of leaf
development" evidence=IMP] [GO:0010928 "regulation of auxin
mediated signaling pathway" evidence=IMP] [GO:0033588 "Elongator
holoenzyme complex" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0048530 "fruit morphogenesis" evidence=IMP] [GO:0080178
"5-carbamoylmethyluridine metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006312 "mitotic
recombination" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] InterPro:IPR017986
InterPro:IPR015943 PROSITE:PS50082 PROSITE:PS50294 Pfam:PF04762
GO:GO:0005829 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006979 GO:GO:0009738 GO:GO:0009734 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0008284
GO:GO:0008283 GO:GO:0006351 EMBL:AB006704 GO:GO:0016746
GO:GO:0035265 GO:GO:0006400 GO:GO:0009965 GO:GO:0071215
GO:GO:0048530 IPI:IPI00517421 RefSeq:NP_196872.1 UniGene:At.6476
ProteinModelPortal:Q9FNA4 SMR:Q9FNA4 STRING:Q9FNA4 PaxDb:Q9FNA4
PRIDE:Q9FNA4 EnsemblPlants:AT5G13680.1 GeneID:831213
KEGG:ath:AT5G13680 TAIR:At5g13680 eggNOG:COG5290
HOGENOM:HOG000242374 InParanoid:Q9FNA4 KO:K11373 OMA:HPVNQVT
PhylomeDB:Q9FNA4 ProtClustDB:CLSN2687035 Genevestigator:Q9FNA4
GO:GO:0033588 GO:GO:0080178 GO:GO:0031538 GO:GO:0009787
GO:GO:0010928 GO:GO:2000024 InterPro:IPR006849 PANTHER:PTHR12747
PIRSF:PIRSF017233 Uniprot:Q9FNA4
Length = 1319
Score = 3230 (1142.1 bits), Expect = 0., P = 0.
Identities = 651/1102 (59%), Positives = 789/1102 (71%)
Query: 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST--VELLKWNCMS 61
+LEWMPSGA IAAVY RKS++ PSI F+ERNGLERSSF I E D+T E LKWN S
Sbjct: 227 ILEWMPSGAKIAAVYKRKSDDSSPSIAFFERNGLERSSFRIGEPEDATESCENLKWNSAS 286
Query: 62 DLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQI 121
DLLA VV + YD++++ FFSNNHWYLK EIRY R G+ MW PTKPLQLICWTL GQ+
Sbjct: 287 DLLAGVVSCKTYDAIRVWFFSNNHWYLKQEIRYPREAGVTVMWDPTKPLQLICWTLSGQV 346
Query: 122 TTYNFIWTTAVMENSTALVIDGSKILVTXXXXXXXXXXXXXXXXKFPTAVTEMAFYSKSS 181
+ +F+W TAVME+STA VID SKILVT F +AV ++A+YS++S
Sbjct: 347 SVRHFMWVTAVMEDSTAFVIDNSKILVTPLSLSLMPPPMYLFSLSFSSAVRDIAYYSRNS 406
Query: 182 KNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGXXXXXXX 241
KNCLA LSDG L V+ PAP+ EDLEG +F VE +TA GS +HL+WL
Sbjct: 407 KNCLAVFLSDGNLSFVEFPAPNTWEDLEGKDFSVEISDCKTALGSFVHLLWLDVHSLLCV 466
Query: 242 XXXGPRHSNYFRGATLNEDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVSTQIPLEGL 301
G H+ + + L G Y QE+E+ C EDHV +TC+G+ A ++ Q LE
Sbjct: 467 SAYGSSHNKCLSSGGYDTE-LHGSYLQEVEVVCHEDHVPDQVTCSGFKASITFQTLLESP 525
Query: 302 VIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTNG 361
V+A+A N +K+ SAF++F GGK+ Y SR + + D FPS+CPW+ V V +G
Sbjct: 526 VLALAWNPSKRDSAFVEFEGGKVLGYASRSEIMETRSSDDSVCFPSTCPWVRVAQVDASG 585
Query: 362 PLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDI 421
KPL+ GLDD GRL ++GK +CNNCSSFSFYS+ A + ++HLI+ TKQ+ LFIVD D+
Sbjct: 586 VHKPLICGLDDMGRLSINGKNLCNNCSSFSFYSELANEVVTHLIILTKQDFLFIVDTKDV 645
Query: 422 LHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMY 481
L+G++AL F G RR EEN+SY+NIWERGAKVIGVL+GDEAAVILQT RGNLEC+Y
Sbjct: 646 LNGDVALGNVFFVIDGRRRDEENMSYVNIWERGAKVIGVLNGDEAAVILQTMRGNLECIY 705
Query: 482 PRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSY 541
PRKLVL+SI NAL Q RF+DA +VRRHRI+FNVIVD GWQAFLQSA FV QVNNL++
Sbjct: 706 PRKLVLSSITNALAQQRFKDAFNLVRRHRIDFNVIVDLYGWQAFLQSAVAFVEQVNNLNH 765
Query: 542 ITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALE 601
+TEFVCA+ NE++TETLYKKF F S E F+ KD S NKVSSVL AIRKALE
Sbjct: 766 VTEFVCAMKNEDVTETLYKKFSF-SKKGDEVFR---VKD---SCSNKVSSVLQAIRKALE 818
Query: 602 EKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGS-DEPRRMSYPSAEEALK 660
E +PESPSRELCILTTLARSDPPA+EE+L RIK +RE ELL S D+ R+ S PSAEEALK
Sbjct: 819 EHIPESPSRELCILTTLARSDPPAIEESLLRIKSVREMELLNSSDDIRKKSCPSAEEALK 878
Query: 661 HLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLR 720
HLLWL DSEAV+EAALGLYDLNLAAIVALNSQRDPKEFLPYLQELE MP LM + ID++
Sbjct: 879 HLLWLLDSEAVFEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELEKMPESLMHFKIDIK 938
Query: 721 LQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSDV 780
LQRF++AL++IVS G Y DC+NL+KK QLFPLGL LITDP K VLEAWADHL D
Sbjct: 939 LQRFDSALRNIVSAGVGYFPDCMNLIKKNPQLFPLGLLLITDPEKKLVVLEAWADHLIDE 998
Query: 781 KCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKXXXXXXXXXXXX 840
K FEDAATTY CC LEKA KAYR G+WSGVL V L+KLGKDE+ K
Sbjct: 999 KRFEDAATTYLCCCKLEKASKAYRECGDWSGVLRVGALMKLGKDEILKLAYELCEEVNAL 1058
Query: 841 GKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSL 900
GKP EAAKIAL+YC D++ GISLLI+AR+WEEALRVAF+H +D I+ VK ++LECAS L
Sbjct: 1059 GKPAEAAKIALEYCSDISGGISLLINAREWEEALRVAFLHTADDRISVVKSSALECASGL 1118
Query: 901 IGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLDDDTVSETSSTFSGMSVY 960
+ E+KE +EKVGKYLTRY SE+RS+ DLDDDT SE SS SGMS Y
Sbjct: 1119 VSEFKESIEKVGKYLTRYLAVRQRRLLLAAKLKSEERSVVDLDDDTASEASSNLSGMSAY 1178
Query: 961 XXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGAKQ 1020
R+ +RQR GKIR GS GEEMALVDHLKGM +T G K+
Sbjct: 1179 TLGTRRGSAASVSSSNATSRA-RDLRRQRKSGKIRAGSAGEEMALVDHLKGMRMTDGGKR 1237
Query: 1021 ELKSLVVFLVMLGEVDTARKLQDTGETFQLSQMAAIKLAEDTMSIDIINEHAHNMERYVQ 1080
ELKSL++ LV LGE+++A+KLQ T E FQ+SQ+AA++LA DT+S + ++E + ERY Q
Sbjct: 1238 ELKSLLICLVTLGEMESAQKLQQTAENFQVSQVAAVELAHDTVSSESVDEEVYCFERYAQ 1297
Query: 1081 IVKLESQNSEAFSWRSKVFLSP 1102
+ +++S+AFSW KVF+SP
Sbjct: 1298 KTRSTARDSDAFSWMLKVFISP 1319
>UNIPROTKB|F1SP27 [details] [associations]
symbol:IKBKAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033588 "Elongator holoenzyme complex" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=IEA] [GO:0008607 "phosphorylase kinase regulator activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] Pfam:PF04762 GO:GO:0005737
GO:GO:0005730 GO:GO:0003677 Gene3D:2.120.10.30 InterPro:IPR011042
GO:GO:0008607 GO:GO:0006368 GO:GO:0016591 GO:GO:0008023 OMA:HPVNQVT
InterPro:IPR006849 PANTHER:PTHR12747 PIRSF:PIRSF017233
GeneTree:ENSGT00390000013344 EMBL:CU442740
Ensembl:ENSSSCT00000005985 Uniprot:F1SP27
Length = 1342
Score = 502 (181.8 bits), Expect = 1.7e-77, Sum P(3) = 1.7e-77
Identities = 143/472 (30%), Positives = 219/472 (46%)
Query: 588 KVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDEP 647
KV + A+R A+E P L ILT+ + P LE L+++ ++ L D
Sbjct: 825 KVDLICDAMRAAMENINPHKYC--LSILTSHVKKTTPELETVLQKVHELQGNAALVPDAV 882
Query: 648 RRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELES 707
SAEEALK+LL L D +Y+ +LG Y+ +L +VA SQ+DPKE+LP+L L+
Sbjct: 883 ------SAEEALKYLLLLVDVNELYDHSLGTYNFDLVLMVAEKSQKDPKEYLPFLNTLKK 936
Query: 708 MPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPAKM 766
M R+TID L+R+E A+ H+ G Y +CLNL+K L+ L+L D +
Sbjct: 937 METNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPECLNLIKD-KNLYNKALELYPPDSQQY 995
Query: 767 EQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEV 826
+ + A+ +HL E A + C + EKA+ A+ A GNW L VA L+L KD++
Sbjct: 996 KDISIAYGEHLLQEHLHEPAGLVFARCGAHEKALSAFLACGNWRQALCVAAQLELNKDQL 1055
Query: 827 AKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLI 886
A K +AA + Y D + LL++ WEEALR+ + R D+I
Sbjct: 1056 ASLGRTLAGKLVEQRKYSDAAAVLEQYAQDYEEAVLLLLEGAAWEEALRLVHKYNRPDII 1115
Query: 887 -TKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXS---EDRSMNDL 942
T VK + LE + Y L+ +R+ +D + +
Sbjct: 1116 ETNVKPSILEAQKN----YMAFLDSQSSIFSRHKNRLLVVRELKEQAQQVNLDDEAPHGQ 1171
Query: 943 DDDTVSETSSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEE 1002
+ D SETSS SG + K +R + ++ GSP E+
Sbjct: 1172 ESDLFSETSSVMSGSDM------SGRYSHSNSRISARSSKNRRKAERKKHSLKEGSPLED 1225
Query: 1003 MALVDHLKGM-SLTVGAKQELKSLVVFLVMLGEVDTARKLQDTGE-TFQLSQ 1052
+AL++ L + T K E+ ++ L + G + R+LQ T E T QL +
Sbjct: 1226 LALLEALSEVVQSTEQLKDEISHILKMLFLFGFDEQGRELQKTFEDTLQLME 1277
Score = 256 (95.2 bits), Expect = 1.7e-77, Sum P(3) = 1.7e-77
Identities = 97/357 (27%), Positives = 174/357 (48%)
Query: 292 VSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPW 351
+S+ + ++G +I++ N+ K S LQ GG+I +Y+ + FP P+
Sbjct: 557 ISSSVTVDGSIISLCCNSKSK-SVALQMTGGQILKYLWESPSPAVEPWKNPGGFPVRFPY 615
Query: 352 -MNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQ 410
+ + G + +L GL D R ++ V +N +SF+ Y + L+L T
Sbjct: 616 PCTQMELAMIGGEECVL-GLTDRCRFFINDTEVASNVTSFAVYDE-------FLLLTTHS 667
Query: 411 N--LLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAV 468
+ L F + + + + L + +HV N E++ + ERG++++ V+ D +
Sbjct: 668 HTCLCFCLREASLKTLQAGL---SSSHVPNG---ESLRKV---ERGSRIVTVVPQD-TKL 717
Query: 469 ILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQS 528
ILQ RGNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FL++
Sbjct: 718 ILQMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDH-NPKVFLEN 776
Query: 529 ASEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNK 588
F+RQ++++++I F + E++T+T+Y S P + P+ D + K
Sbjct: 777 VDTFIRQIDSVNHINLFFTELKEEDVTKTMYPP---PSTPTVQ-----PSSD---PDGKK 825
Query: 589 VSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSD 645
V + A+R A+E P L ILT+ + P LE L+++ ++ L D
Sbjct: 826 VDLICDAMRAAMENINPHKYC--LSILTSHVKKTTPELETVLQKVHELQGNAALVPD 880
Score = 162 (62.1 bits), Expect = 1.7e-77, Sum P(3) = 1.7e-77
Identities = 48/166 (28%), Positives = 78/166 (46%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ D+ ++ +VF+E+NGL F + D V L WN
Sbjct: 250 LGPALAWKPSGSLIASTQDKPNQQ---DVVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNA 306
Query: 60 MSDLLAAVV---RFEEYDSVK----ICFFSNNHWYLKYEIRYL---RRDGIRFMWHPTKP 109
S +LA + + EE ++K + N HWYLK + + + + MW P P
Sbjct: 307 DSAVLAVWLEDLQTEEKSTLKSYVQLWTVGNYHWYLKQSLPFSSCGKSKIVSLMWDPVAP 366
Query: 110 LQLICWTLDGQITTYNFIWTTA------VMENSTALVIDGSKILVT 149
+L Y++ WTT + + + V+DG+++LVT
Sbjct: 367 YRLHVLCQGWHYLCYDWHWTTDRSSGDNLSDMANVAVVDGNRVLVT 412
>UNIPROTKB|O95163 [details] [associations]
symbol:IKBKAP "Elongator complex protein 1" species:9606
"Homo sapiens" [GO:0008023 "transcription elongation factor
complex" evidence=IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008607 "phosphorylase kinase
regulator activity" evidence=IDA] [GO:0033588 "Elongator holoenzyme
complex" evidence=IDA] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0006461 "protein complex assembly" evidence=TAS]
[GO:0006468 "protein phosphorylation" evidence=TAS] [GO:0006955
"immune response" evidence=TAS] [GO:0030335 "positive regulation of
cell migration" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IDA]
[GO:0007165 "signal transduction" evidence=TAS] Pfam:PF04762
GO:GO:0005524 GO:GO:0005737 GO:GO:0006955 GO:GO:0005730
GO:GO:0006461 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0006468
GO:GO:0008607 GO:GO:0006357 GO:GO:0004672 GO:GO:0004871
EMBL:AL359692 EMBL:CH471105 GO:GO:0030335 GO:GO:0006368
GO:GO:0016591 GO:GO:0008023 EMBL:AL354797 eggNOG:COG5290 KO:K11373
OMA:HPVNQVT GO:GO:0033588 InterPro:IPR006849 PANTHER:PTHR12747
PIRSF:PIRSF017233 EMBL:AF044195 EMBL:AF153419 EMBL:AK001641
EMBL:AK289962 EMBL:AL049945 IPI:IPI00293735 RefSeq:NP_003631.2
UniGene:Hs.494738 ProteinModelPortal:O95163 SMR:O95163
DIP:DIP-27579N IntAct:O95163 MINT:MINT-1034584 STRING:O95163
PhosphoSite:O95163 PaxDb:O95163 PRIDE:O95163
Ensembl:ENST00000374647 GeneID:8518 KEGG:hsa:8518 UCSC:uc004bdl.3
CTD:8518 GeneCards:GC09M111629 HGNC:HGNC:5959 HPA:CAB021340
MIM:223900 MIM:603722 neXtProt:NX_O95163 Orphanet:1764
PharmGKB:PA29775 HOVERGEN:HBG019038 InParanoid:O95163
OrthoDB:EOG4KPT90 PhylomeDB:O95163 ChEMBL:CHEMBL1818
GenomeRNAi:8518 NextBio:31890 ArrayExpress:O95163 Bgee:O95163
CleanEx:HS_IKBKAP Genevestigator:O95163 GermOnline:ENSG00000070061
GO:GO:0007252 Uniprot:O95163
Length = 1332
Score = 478 (173.3 bits), Expect = 6.4e-75, Sum P(3) = 6.4e-75
Identities = 141/471 (29%), Positives = 216/471 (45%)
Query: 587 NKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDE 646
NK+ V A+R +E P L ILT+ + P LE L+++ EL G+
Sbjct: 814 NKIDLVCDAMRAVMESINPHKYC--LSILTSHVKKTTPELEIVLQKVH-----ELQGN-A 865
Query: 647 PRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELE 706
P SAEEALK+LL L D +Y+ +LG YD +L +VA SQ+DPKE+LP+L L+
Sbjct: 866 PSDPDAVSAEEALKYLLHLVDVNELYDHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTLK 925
Query: 707 SMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKM 766
M R+TID L+R+E A+ H+ G Y +CLNL+K L+ LKL + ++
Sbjct: 926 KMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPECLNLIKD-KNLYNEALKLYSPSSQQ 984
Query: 767 EQVLE-AWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDE 825
Q + A+ +HL +E A + C + EKA+ A+ GNW L VA L KD+
Sbjct: 985 YQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALSAFLTCGNWKQALCVAAQLNFTKDQ 1044
Query: 826 VAKXXXXXXXXXXXXGKPGEAAKIALDYCG-DVTNGISLLIDARDWEEALRVAFMHRRED 884
+ K +AA + L+ C D + LL++ WEEALR+ + + R D
Sbjct: 1045 LVGLGRTLAGKLVEQRKHIDAAMV-LEECAQDYEEAVLLLLEGAAWEEALRLVYKYNRLD 1103
Query: 885 LI-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLD 943
+I T VK + LE + + ++ R +D + +
Sbjct: 1104 IIETNVKPSILEAQKNYMAFLDSQTATFSRHKKRLLVVRELKEQAQQAGL-DDEVPHGQE 1162
Query: 944 DDTVSETSSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEEM 1003
D SETSS SG + K +R + ++ GSP E++
Sbjct: 1163 SDLFSETSSVVSGSEM------SGKYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDL 1216
Query: 1004 ALVDHLKGM-SLTVGAKQELKSLVVFLVMLGEVDTARKLQDTGE-TFQLSQ 1052
AL++ L + T K E+ ++ L + + R+LQ E T QL +
Sbjct: 1217 ALLEALSEVVQNTENLKDEVYHILKVLFLFEFDEQGRELQKAFEDTLQLME 1267
Score = 227 (85.0 bits), Expect = 6.4e-75, Sum P(3) = 6.4e-75
Identities = 88/343 (25%), Positives = 157/343 (45%)
Query: 292 VSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPW 351
VS+ ++G++I++ N+ K S LQ G+I +Y+ + FP P+
Sbjct: 547 VSSSAAVDGVIISLCCNSKTK-SVVLQLADGQIFKYLWESPSLAIKPWKNSGGFPVRFPY 605
Query: 352 -MNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQ 410
+ G + +L GL D R ++ V +N +SF+ Y + L+L T
Sbjct: 606 PCTQTELAMIGEEECVL-GLTDRCRFFINDIEVASNITSFAVYDE-------FLLLTTHS 657
Query: 411 NLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVIL 470
+ + D L + HV + + ERG++++ V+ D ++L
Sbjct: 658 HTCQCFCLRDASFKTLQAGLSS-NHVSHGEVLRKV------ERGSRIVTVVPQD-TKLVL 709
Query: 471 QTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSAS 530
Q RGNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FL +
Sbjct: 710 QMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDH-NPKVFLGNVE 768
Query: 531 EFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVS 590
F++Q++++++I F + E++T+T+Y P ++D + NK+
Sbjct: 769 TFIKQIDSVNHINLFFTELKEEDVTKTMY--------PAPVTSSVYLSRD---PDGNKID 817
Query: 591 SVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERI 633
V A+R +E P L ILT+ + P LE L+++
Sbjct: 818 LVCDAMRAVMESINPHKYC--LSILTSHVKKTTPELEIVLQKV 858
Score = 192 (72.6 bits), Expect = 6.4e-75, Sum P(3) = 6.4e-75
Identities = 63/206 (30%), Positives = 92/206 (44%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ D+ ++ IVF+E+NGL F + D V L WN
Sbjct: 240 LGPALAWKPSGSLIASTQDKPNQQ---DIVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNA 296
Query: 60 MSDLLAAVV---RFEEYDSVKICF----FSNNHWYLKYEIRYL---RRDGIRFMWHPTKP 109
S +LA + + EE K C N HWYLK + + + + MW P P
Sbjct: 297 DSSVLAVWLEDLQREESSIPKTCVQLWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDPVTP 356
Query: 110 LQLICWTLDGQITTYNFIWTT--AVMENSTAL----VIDGSKILVTXXXXXXXXXXXXXX 163
+L Y++ WTT +V +NS+ L VIDG+++LVT
Sbjct: 357 YRLHVLCQGWHYLAYDWHWTTDRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTY 416
Query: 164 XXKFPTAVTEMAFYSKSSK-NCLAAI 188
FP V ++ F + K N LA +
Sbjct: 417 QLLFPHPVNQVTFLAHPQKSNDLAVL 442
Score = 37 (18.1 bits), Expect = 1.1e-58, Sum P(3) = 1.1e-58
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 100 IRFMWHPTKPLQLICWTLDGQITTY 124
+ F+ HP K L QI+ Y
Sbjct: 427 VTFLAHPQKSNDLAVLDASNQISVY 451
>UNIPROTKB|Q8WND5 [details] [associations]
symbol:IKBKAP "Elongator complex protein 1" species:9986
"Oryctolagus cuniculus" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0008023 "transcription elongation
factor complex" evidence=ISS] [GO:0008607 "phosphorylase kinase
regulator activity" evidence=ISS] [GO:0030335 "positive regulation
of cell migration" evidence=ISS] [GO:0033588 "Elongator holoenzyme
complex" evidence=ISS] Pfam:PF04762 GO:GO:0005737
Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008607 GO:GO:0006357
GO:GO:0006351 GO:GO:0030335 GO:GO:0008023 eggNOG:COG5290
GO:GO:0033588 InterPro:IPR006849 PANTHER:PTHR12747
PIRSF:PIRSF017233 CTD:8518 HOVERGEN:HBG019038 OrthoDB:EOG4KPT90
EMBL:AF388202 RefSeq:NP_001076124.1 UniGene:Ocu.4098
ProteinModelPortal:Q8WND5 STRING:Q8WND5 GeneID:100009360
HOGENOM:HOG000007712 Uniprot:Q8WND5
Length = 1333
Score = 463 (168.0 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 135/468 (28%), Positives = 218/468 (46%)
Query: 588 KVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDEP 647
K+ + A+R A+E P L ILT+ + P LE L+++ EL G+ P
Sbjct: 816 KLDLICDALRVAMENINPHKYC--LPILTSHVKKTTPELEIVLQKVH-----ELQGN-AP 867
Query: 648 RRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELES 707
SAEEALK+LL L D +Y+ +LG YD +L +VA SQ+DPKE+LP+L L+
Sbjct: 868 SDPDAVSAEEALKYLLLLVDVNELYDHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTLKK 927
Query: 708 MPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKME 767
M R+TID L+R+E A+ H+ G Y ++CLNL+K L+ LKL P E
Sbjct: 928 METNYQRFTIDKYLKRYEKAIGHLSKCGPEYFSECLNLIKD-KNLYNEALKLYP-PTSQE 985
Query: 768 --QVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDE 825
+ A+ +HL + +E A + C + EKA+ A+ G+W L +A L + +++
Sbjct: 986 YKDISIAYGEHLMEEHQYEPAGLVFARCGAHEKALSAFLTCGSWQQTLCMAAQLNMTEEQ 1045
Query: 826 VAKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDL 885
+A K +AA + Y D + LL++ WEEALR+ + + R D+
Sbjct: 1046 LAGLGRTLAGKLAEQRKHSDAAIVLEQYTQDYEEAVLLLLEGAAWEEALRLVYKYNRLDI 1105
Query: 886 I-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLDD 944
I T +K + LE + + + ++ R +D + +
Sbjct: 1106 IETNIKPSILEAYKNYMAFLESQSATFSRHKERLLEVRELKERAQQVDL-DDEMPHGQEA 1164
Query: 945 DTVSETSSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEEMA 1004
D SETSS SG + K +R + ++ GSP E++A
Sbjct: 1165 DLFSETSSIVSGSEM------SSKYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDLA 1218
Query: 1005 LVDHLKGMSLTVGA-KQELKSLVVFLVMLGEVDTARKLQDT-GETFQL 1050
L++ L + ++ K E+ ++ L + + R+LQ T +T QL
Sbjct: 1219 LLEALNEVVQSLDKLKDEVYRILKVLFLFEFDEQGRELQKTFQDTLQL 1266
Score = 236 (88.1 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 93/344 (27%), Positives = 162/344 (47%)
Query: 292 VSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPW 351
VS+ I ++G++I++ N+ K S LQ G+I +Y+ + FP P+
Sbjct: 548 VSSSISVDGIIISMCCNSKTK-SVALQLADGQILKYIWESPSLAVEPWKNPGGFPIQFPY 606
Query: 352 MNV-VSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQ 410
+ + G + +L GL D R ++ V +N +SF+ Y + L+L T
Sbjct: 607 PCIQTELAMIGGEECVL-GLTDRCRFFINDTEVASNITSFAVYDE-------FLLLTTHS 658
Query: 411 NLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVIL 470
+ + D L + +HV N + ERG++++ V+ D +IL
Sbjct: 659 HTCQCYCLKDASIKTLQAGLSS-SHVSNGEILRKV------ERGSRIVTVVPQD-TKLIL 710
Query: 471 QTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSAS 530
Q RGNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FLQ+
Sbjct: 711 QMPRGNLEVVHHRALVLAQIRKWLDKIMFKEAFECMRKLRINLNLIHDH-NPEVFLQNVE 769
Query: 531 EFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCR-EEFKDLPAKDFKASECNKV 589
F+RQ++ +++I F + E++T+T+Y +P ++ +D P K+
Sbjct: 770 TFIRQIDCVNHINLFFTELKEEDVTKTMYPP----PVPSSVQQSRD-PGG-------TKL 817
Query: 590 SSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERI 633
+ A+R A+E P L ILT+ + P LE L+++
Sbjct: 818 DLICDALRVAMENINPHKYC--LPILTSHVKKTTPELEIVLQKV 859
Score = 158 (60.7 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 59/206 (28%), Positives = 89/206 (43%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ ++ ++ +VF+E+NGL F + D V L WN
Sbjct: 240 LGPALAWKPSGSLIASTQNKPNQQ---DVVFFEKNGLLHGQFTLPFLKDEVKVNDLLWNA 296
Query: 60 MSDLLAAVVRF--EEYDSV-----KICFFSNNHWYLKYEI---RYLRRDGIRFMWHPTKP 109
S +LA + E DSV ++ N HWYL + Y + + MW P P
Sbjct: 297 DSSVLAVWLEDLQREEDSVLKTYVQLWTVGNYHWYLNECLPFSTYGKSKIVSLMWDPVIP 356
Query: 110 LQLICWTLDGQITTYNFIWTT--AVMENSTAL----VIDGSKILVTXXXXXXXXXXXXXX 163
+L Y++ WTT + +N + L VIDG++ILVT
Sbjct: 357 YRLHVLCQGWHYLCYDWRWTTDRSSGDNESDLANVAVIDGNRILVTVFQQTVVPPPMCTY 416
Query: 164 XXKFPTAVTEMAFYSKSSK-NCLAAI 188
P V ++ F + K N LA +
Sbjct: 417 RLLLPHPVNQVTFCALPKKSNDLAVL 442
>MGI|MGI:1914544 [details] [associations]
symbol:Ikbkap "inhibitor of kappa light polypeptide enhancer
in B cells, kinase complex-associated protein" species:10090 "Mus
musculus" [GO:0004672 "protein kinase activity" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0007252 "I-kappaB phosphorylation"
evidence=ISO] [GO:0008023 "transcription elongation factor complex"
evidence=ISO] [GO:0008607 "phosphorylase kinase regulator activity"
evidence=ISO] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=IMP] [GO:0033588 "Elongator holoenzyme complex"
evidence=ISO] MGI:MGI:1914544 Pfam:PF04762 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0003677 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008607 GO:GO:0006357 GO:GO:0004672
EMBL:AL807762 GO:GO:0030335 GO:GO:0006368 GO:GO:0016591
GO:GO:0008023 eggNOG:COG5290 KO:K11373 GO:GO:0033588
InterPro:IPR006849 PANTHER:PTHR12747 PIRSF:PIRSF017233
GeneTree:ENSGT00390000013344 CTD:8518 HOVERGEN:HBG019038
OrthoDB:EOG4KPT90 GO:GO:0007252 EMBL:AF367244 EMBL:AF387811
EMBL:AF140786 EMBL:AK004402 EMBL:AK076152 EMBL:AK035944
EMBL:AK147153 EMBL:AL929577 EMBL:BC052387 EMBL:BC054468
IPI:IPI00380780 RefSeq:NP_080355.2 UniGene:Mm.282743
ProteinModelPortal:Q7TT37 SMR:Q7TT37 STRING:Q7TT37
PhosphoSite:Q7TT37 PaxDb:Q7TT37 PRIDE:Q7TT37
Ensembl:ENSMUST00000030140 GeneID:230233 KEGG:mmu:230233
UCSC:uc012del.1 InParanoid:Q7TT37 OMA:NANLLCS ChiTaRS:IKBKAP
NextBio:379841 Bgee:Q7TT37 Genevestigator:Q7TT37 Uniprot:Q7TT37
Length = 1333
Score = 492 (178.3 bits), Expect = 3.4e-70, Sum P(3) = 3.4e-70
Identities = 144/473 (30%), Positives = 222/473 (46%)
Query: 588 KVSSVLLAIRKALEEKVPESPSRELC--ILTTLARSDPPALEEALERIKIIRETELLGSD 645
K+ + A+R A+E P R+ C ILT+ + P LE L++++ EL G+
Sbjct: 816 KLDLICDAMRAAMEAINP----RKFCLSILTSHVKKTTPELEIVLQKVQ-----ELQGN- 865
Query: 646 EPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQEL 705
P S EEALK+LL L D ++ +LG YD NL +VA SQ+DPKE+LP+L L
Sbjct: 866 LPFDPESVSVEEALKYLLLLVDVNELFNHSLGTYDFNLVLMVAEKSQKDPKEYLPFLNTL 925
Query: 706 ESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPA 764
+ M R+TID L+R+E AL H+ G Y +CLNL+K L+ LKL D
Sbjct: 926 KKMETNYQRFTIDKYLKRYEKALGHLSKCGPEYFTECLNLIKD-KNLYKEALKLYRPDSP 984
Query: 765 KMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKD 824
+ + V A+ +HL +E A + C + EKA++A+ A G+W L VA L++ KD
Sbjct: 985 QYQAVSMAYGEHLMQEHLYEPAGLVFARCGAQEKALEAFLACGSWQQALCVAAQLQMSKD 1044
Query: 825 EVAKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRRED 884
+VA K EAA + Y D + LL++ WEEALR+ + + R D
Sbjct: 1045 KVAGLARTLAGKLVEQRKHSEAATVLEQYAQDYEEAVLLLLEGSAWEEALRLVYKYDRVD 1104
Query: 885 LI-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLD 943
+I T VK + LE + + ++ R + + +
Sbjct: 1105 IIETSVKPSILEAQKNYMDFLDSETATFIRHKNRLQVVRALRRQAPQVHVDHEVAHGP-E 1163
Query: 944 DDTVSETSSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEEM 1003
D SETSS SG + K +R + ++ GSP E +
Sbjct: 1164 SDLFSETSSIMSGSEM------SGRYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEGL 1217
Query: 1004 ALVDHLKGMSLTVGA-KQELKSLVVFLVMLGEVDTARKLQDTGE-TFQLSQMA 1054
AL++ L + +V K E+++++ L + + A++LQ E T QL + A
Sbjct: 1218 ALLEALSEVVQSVEKLKDEVRAILKVLFLFEFEEQAKELQRAFESTLQLMERA 1270
Score = 203 (76.5 bits), Expect = 3.4e-70, Sum P(3) = 3.4e-70
Identities = 88/346 (25%), Positives = 159/346 (45%)
Query: 292 VSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPW 351
VS+ + ++G+VI + + K S +Q G++ +Y+ + P
Sbjct: 548 VSSSVTVDGVVIGLCCCSKTK-SLAVQLADGQVLKYLWESPSLAVEPWKNSEGIPVRFVH 606
Query: 352 -MNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQ 410
+ V T G + +L GL D R ++ V +N +SF+ L++ T
Sbjct: 607 PCTQMEVATIGGEECVL-GLTDRCRFFINDTEVASNITSFAVCD-------DFLLVTTHS 658
Query: 411 NLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVIL 470
+ + +S +LK G+ I + ERG++++ V+ D +IL
Sbjct: 659 HTCQVFSLSGA-----SLKMLQAALSGSHEASGEI--LRKVERGSRIVTVVPQD-TKLIL 710
Query: 471 QTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSAS 530
Q RGNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FL++
Sbjct: 711 QMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDH-NPKVFLENVE 769
Query: 531 EFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVS 590
FV+Q++++++I F + E++T+T+Y P + + D K K+
Sbjct: 770 TFVKQIDSVNHINLFFTELREEDVTKTMYPP------PITKSVQVSTHPDGK-----KLD 818
Query: 591 SVLLAIRKALEEKVPESPSRELC--ILTTLARSDPPALEEALERIK 634
+ A+R A+E P R+ C ILT+ + P LE L++++
Sbjct: 819 LICDAMRAAMEAINP----RKFCLSILTSHVKKTTPELEIVLQKVQ 860
Score = 156 (60.0 bits), Expect = 3.4e-70, Sum P(3) = 3.4e-70
Identities = 48/166 (28%), Positives = 77/166 (46%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ D+ ++ +VF+E+NGL F + D V L WN
Sbjct: 240 LGPALAWKPSGSLIASTQDKPNQQ---DVVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNA 296
Query: 60 MSDLLAAVVR-FEEYDS------VKICFFSNNHWYLKYEIRYL---RRDGIRFMWHPTKP 109
S +LA + + DS V++ N HWYLK + + + + +W P P
Sbjct: 297 DSSVLAIWLEDLPKEDSSTLKSYVQLWTVGNYHWYLKQSLPFSTTGKNQIVSLLWDPVTP 356
Query: 110 LQLICWTLDGQITTYNFIWTTAVMENSTA------LVIDGSKILVT 149
+L + ++ WTT ++A VIDG+++LVT
Sbjct: 357 CRLHVLCTGWRYLCCDWHWTTDRSSGNSANDLANVAVIDGNRVLVT 402
>UNIPROTKB|E1BBQ3 [details] [associations]
symbol:LOC505465 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0033588 "Elongator holoenzyme complex"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II,
holoenzyme" evidence=IEA] [GO:0008607 "phosphorylase kinase
regulator activity" evidence=IEA] [GO:0008023 "transcription
elongation factor complex" evidence=IEA] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] Pfam:PF04762
GO:GO:0005737 GO:GO:0005730 GO:GO:0003677 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008607 GO:GO:0006368 GO:GO:0016591
GO:GO:0008023 OMA:HPVNQVT InterPro:IPR006849 PANTHER:PTHR12747
PIRSF:PIRSF017233 GeneTree:ENSGT00390000013344 EMBL:DAAA02024462
EMBL:DAAA02024463 EMBL:DAAA02024464 IPI:IPI00707973
Ensembl:ENSBTAT00000006570 Uniprot:E1BBQ3
Length = 1191
Score = 426 (155.0 bits), Expect = 7.2e-69, Sum P(3) = 7.2e-69
Identities = 117/374 (31%), Positives = 180/374 (48%)
Query: 588 KVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDEP 647
KV + A+R A+E P L ILT+ + P LE AL+++ +L GS P
Sbjct: 815 KVDLICDAMRAAMENINPHKYC--LSILTSHVKKTTPELEIALQKVH-----KLQGSAPP 867
Query: 648 RRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELES 707
+ SAEEALK+LL L D +Y+ +LG YD +L +VA SQ+DPKE+LP+L L+
Sbjct: 868 VPDTV-SAEEALKYLLLLVDVNELYDHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTLKK 926
Query: 708 MPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKM- 766
M R+TID L+R+E A+ H+ G Y +CLNL+K L+ LKL ++
Sbjct: 927 MEMNYQRFTIDKHLKRYEKAIGHLSKCGPEYFPECLNLIKD-KNLYNEALKLYPPNSQQY 985
Query: 767 EQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEV 826
+ + A+ +HL E A + C + EKA+ A+ A G+W L A L L +++
Sbjct: 986 KDISIAYGEHLLQEHLHEPAGLVFARCGAHEKALSAFLACGSWQQALCAAAQLHLTAEQL 1045
Query: 827 AKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLI 886
A K +AA + Y D + +L++ WEEALR+ + R D+I
Sbjct: 1046 AGLGRTLAGKLVEQRKHSDAATVLEQYAQDHEEAVLVLLEGAAWEEALRLVHKYNRPDII 1105
Query: 887 -TKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLDDD 945
T +K + LE + + ++ R +D + + + D
Sbjct: 1106 ETNIKPSILEGEKNYMAFLDSQTATFSRHKKRLLVVRELKEQAQPVSL-DDEAPHGPESD 1164
Query: 946 TVSETSSTFSGMSV 959
SETSS SG ++
Sbjct: 1165 LFSETSSVMSGSNL 1178
Score = 242 (90.2 bits), Expect = 7.2e-69, Sum P(3) = 7.2e-69
Identities = 93/343 (27%), Positives = 163/343 (47%)
Query: 292 VSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPW 351
+S+ + ++G++I++ N K S LQ GG+I +Y+ + P P+
Sbjct: 547 ISSSVTVDGVIISLCCNPKTK-SVALQVAGGQIFKYLWESPSLAVEPWKNPGGLPVRFPY 605
Query: 352 -MNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQ 410
+ G + +L GL D R ++ V +N +SF+ Y + L++ T
Sbjct: 606 PCTQTELAMVGGEECIL-GLTDRCRFFINDTEVASNITSFAVYDE-------FLLVTTHS 657
Query: 411 NLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVIL 470
+ + D L + +HV N E++ + ERG++++ V+ D +IL
Sbjct: 658 HTCQCFCLRDASLKTLQAGLSS-SHVPNG---ESLRKV---ERGSRIVTVVPQD-TKLIL 709
Query: 471 QTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSAS 530
Q RGNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FL++
Sbjct: 710 QMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDH-NPKVFLENVE 768
Query: 531 EFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVS 590
F+RQ++++++I F + E++T+T+Y +P P D K KV
Sbjct: 769 TFIRQIDSVNHINLFFTELKEEDVTKTMYPP----PVPSTVPLSSDP--DEK-----KVD 817
Query: 591 SVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERI 633
+ A+R A+E P L ILT+ + P LE AL+++
Sbjct: 818 LICDAMRAAMENINPHKYC--LSILTSHVKKTTPELEIALQKV 858
Score = 172 (65.6 bits), Expect = 7.2e-69, Sum P(3) = 7.2e-69
Identities = 56/206 (27%), Positives = 92/206 (44%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ D+ ++ +VF+E+NGL F + D V L WN
Sbjct: 240 LGPALAWKPSGSLIASTQDKPNQQ---DVVFFEKNGLLHGQFTLPFFKDEVKVNGLFWNA 296
Query: 60 MSDLLAA---VVRFEEYDSVK----ICFFSNNHWYLKYEIRYL---RRDGIRFMWHPTKP 109
S +LA ++ EE S+K + N HWYLK + + + + +W P P
Sbjct: 297 DSTVLAVWLEELQREENSSLKTYVQLWTVGNYHWYLKQSLPFDTCGKSKIVSLLWDPVSP 356
Query: 110 LQLICWTLDGQITTYNFIWTTA------VMENSTALVIDGSKILVTXXXXXXXXXXXXXX 163
+L Y++ WTT + + + VIDG+++LVT
Sbjct: 357 YRLHVLCQGWHYLCYDWHWTTDRSSGDNLSDMANVAVIDGNRVLVTVFRQSVVPPPMCTY 416
Query: 164 XXKFPTAVTEMAFYSKSSK-NCLAAI 188
+ P +V ++ F ++ K N LA +
Sbjct: 417 RLQLPHSVNQVMFSARPEKSNDLAVL 442
Score = 37 (18.1 bits), Expect = 2.0e-47, Sum P(3) = 2.0e-47
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 565 LSLPCREEFKDLPAKDFKASECNKVSSVLLA 595
L P ++ +P +D +A E N + LLA
Sbjct: 477 LRTPHLDKRYKIPIEDSEAEEVNPLKFSLLA 507
>RGD|620072 [details] [associations]
symbol:Ikbkap "inhibitor of kappa light polypeptide gene enhancer
in B-cells, kinase complex-associated protein" species:10116
"Rattus norvegicus" [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO;ISS] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=ISO] [GO:0007252 "I-kappaB
phosphorylation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=ISO;ISS] [GO:0008607
"phosphorylase kinase regulator activity" evidence=ISO;ISS]
[GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
evidence=ISO] [GO:0030335 "positive regulation of cell migration"
evidence=ISO;ISS] [GO:0033588 "Elongator holoenzyme complex"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO]
RGD:620072 Pfam:PF04762 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0003677 Gene3D:2.120.10.30 InterPro:IPR011042 GO:GO:0008607
GO:GO:0006357 GO:GO:0004672 GO:GO:0030335 GO:GO:0006368
GO:GO:0016591 GO:GO:0008023 eggNOG:COG5290 KO:K11373 GO:GO:0033588
InterPro:IPR006849 PANTHER:PTHR12747 PIRSF:PIRSF017233 CTD:8518
HOVERGEN:HBG019038 OrthoDB:EOG4KPT90 GO:GO:0007252
HOGENOM:HOG000007712 EMBL:AF388201 IPI:IPI00389755
RefSeq:NP_543175.1 UniGene:Rn.162816 ProteinModelPortal:Q8VHU4
STRING:Q8VHU4 PRIDE:Q8VHU4 GeneID:140934 KEGG:rno:140934
InParanoid:Q8VHU4 NextBio:620811 ArrayExpress:Q8VHU4
Genevestigator:Q8VHU4 Uniprot:Q8VHU4
Length = 1331
Score = 469 (170.2 bits), Expect = 7.6e-66, Sum P(3) = 7.6e-66
Identities = 142/469 (30%), Positives = 219/469 (46%)
Query: 588 KVSSVLLAIRKALEEKVPESPSRELC--ILTTLARSDPPALEEALERIKIIRETELLGSD 645
KV + A+R A+E P R+ C ILT+ + P L+ L+++ EL G
Sbjct: 814 KVDLICDAMRVAMETINP----RKFCLSILTSHVKKTTPELDIVLQKVH-----ELQGKI 864
Query: 646 EPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQEL 705
P SAEEALK+LL L D ++ +LG YD +L +VA SQ+DPKE+LP+L L
Sbjct: 865 -PFVPESVSAEEALKYLLLLVDVNELFNHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTL 923
Query: 706 ESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPA 764
+ M R+TID L+R+E AL H+ G Y +CLNL+K L+ LKL D
Sbjct: 924 KKMETNYQRFTIDKYLKRYEKALGHLSKCGPEYFTECLNLIKD-KNLYKEALKLYRPDSP 982
Query: 765 KMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKD 824
+ + V A+ +HL +E A + C + EKA++A+ A G+W L +A L++ KD
Sbjct: 983 QYQAVSVAYGEHLVQELLYEPAGLVFARCGAHEKALEAFLACGSWQQALCMAAQLQMAKD 1042
Query: 825 EVAKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRRED 884
+VA K EAA + Y D + LL++ WEEALR+ + + R D
Sbjct: 1043 KVAGLARTLAGKLVEQRKHSEAATVLEQYALDYEEAVLLLLEGSAWEEALRLVYKYDRVD 1102
Query: 885 LI-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLD 943
+I T VK + LE + + ++ R + + + +
Sbjct: 1103 IIETSVKPSILEAQKNYMDFLDSQTATFIRHKNRLKVVRELKSQRPRVHVDHEVA-HGRE 1161
Query: 944 DDTVSETSSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEEM 1003
D SETSS SG + K +R + ++ GSP E +
Sbjct: 1162 TDLFSETSSIRSGSEM------SGRYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEGL 1215
Query: 1004 ALVDHLKGMSLTVGA-KQELKSLVVFLVMLGEVDTARKLQDTGE-TFQL 1050
AL++ L + ++ K E+ +++ L + + AR+LQ E T QL
Sbjct: 1216 ALLEALSEVVQSIEKLKDEVHAILKVLFLFEFEEQARELQRAFESTLQL 1264
Score = 192 (72.6 bits), Expect = 7.6e-66, Sum P(3) = 7.6e-66
Identities = 69/272 (25%), Positives = 131/272 (48%)
Query: 292 VSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDAS----FPS 347
VS+ + ++G+VI + + K SA +Q G++ +Y+ + + F
Sbjct: 546 VSSSVTVDGVVIGLCCCSKTKSSA-VQLADGQVLKYLWESPSSAVEPWKNSEGRPVRFAR 604
Query: 348 SCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILA 407
C M ++G G + + GL D R ++ V +N +SF+ L++
Sbjct: 605 PCTQMEAAAIG--G--EECVLGLTDRCRFFINDTEVASNITSFAVCD-------DFLLVT 653
Query: 408 TKQNLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAA 467
T + +S +LK G++ I + ERG++++ V+ D
Sbjct: 654 THSHTCQCFSLSGA-----SLKMLQAGLCGSQVPSGEI--LRKVERGSRIVTVVPQD-TK 705
Query: 468 VILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQ 527
+ILQ RGNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FL+
Sbjct: 706 LILQMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIHDH-NPKVFLE 764
Query: 528 SASEFVRQVNNLSYITEFVCAINNENITETLY 559
+ F++Q+++++++ F + E++T+T+Y
Sbjct: 765 NVETFIKQIDSVNHLNLFFTELKEEDVTKTMY 796
Score = 190 (71.9 bits), Expect = 1.2e-65, Sum P(3) = 1.2e-65
Identities = 56/184 (30%), Positives = 99/184 (53%)
Query: 452 ERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRI 511
ERG++++ V+ D +ILQ RGNLE ++ R LVL I L + F++A +R+ RI
Sbjct: 691 ERGSRIVTVVPQD-TKLILQMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRI 749
Query: 512 NFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCRE 571
N N+I DH + FL++ F++Q+++++++ F + E++T+T+Y P +
Sbjct: 750 NLNLIHDH-NPKVFLENVETFIKQIDSVNHLNLFFTELKEEDVTKTMYPP------PVTK 802
Query: 572 EFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPSRELC--ILTTLARSDPPALEEA 629
+ D K KV + A+R A+E P R+ C ILT+ + P L+
Sbjct: 803 SVQVSTNPDGK-----KVDLICDAMRVAMETINP----RKFCLSILTSHVKKTTPELDIV 853
Query: 630 LERI 633
L+++
Sbjct: 854 LQKV 857
Score = 150 (57.9 bits), Expect = 7.6e-66, Sum P(3) = 7.6e-66
Identities = 51/170 (30%), Positives = 80/170 (47%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ D+ ++ +VF+E+NGL F + D V L WN
Sbjct: 240 LGPSLAWKPSGSLIASTQDKPNQQ---DVVFFEKNGLLHGYFTLPFLKDEVKVNDLLWNA 296
Query: 60 MSDLLAAVVRF--EEYDS-----VKICFFSNNHWYLKYEIRYL---RRDGIRFMWHPTKP 109
S +LA + +E S V++ N HWYLK + + + + +W P P
Sbjct: 297 DSSVLAVWLEDLPKEGSSTLKSYVQLWTVGNYHWYLKQSLPFSTTGKNQIVSLLWDPVTP 356
Query: 110 --LQLIC--WTLDGQITTYNFIWTTAVMENSTA------LVIDGSKILVT 149
L ++C W + ++ WTT ++A VIDG+K+LVT
Sbjct: 357 GRLHVLCQGW----RYLCCDWHWTTDRSSGNSADDLANVAVIDGNKVLVT 402
Score = 38 (18.4 bits), Expect = 4.9e-39, Sum P(2) = 4.9e-39
Identities = 12/53 (22%), Positives = 23/53 (43%)
Query: 438 NRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSI 490
N + + + + +I G L ++ V++ + RG E +K V T I
Sbjct: 3 NLKLHQTLEFRDIQAPGKPQCFCLRAEQGTVLIGSERGLTEVDPVKKEVKTEI 55
>UNIPROTKB|F5H2T0 [details] [associations]
symbol:IKBKAP "Elongator complex protein 1" species:9606
"Homo sapiens" [GO:0030335 "positive regulation of cell migration"
evidence=IEA] Pfam:PF04762 GO:GO:0005524 GO:GO:0004672
EMBL:AL359692 EMBL:AL354797 InterPro:IPR006849 PANTHER:PTHR12747
HGNC:HGNC:5959 GO:GO:0007252 IPI:IPI00981273
ProteinModelPortal:F5H2T0 SMR:F5H2T0 Ensembl:ENST00000537196
ArrayExpress:F5H2T0 Bgee:F5H2T0 Uniprot:F5H2T0
Length = 983
Score = 478 (173.3 bits), Expect = 6.1e-65, Sum P(3) = 6.1e-65
Identities = 141/471 (29%), Positives = 216/471 (45%)
Query: 587 NKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDE 646
NK+ V A+R +E P L ILT+ + P LE L+++ EL G+
Sbjct: 465 NKIDLVCDAMRAVMESINPHKYC--LSILTSHVKKTTPELEIVLQKVH-----ELQGN-A 516
Query: 647 PRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELE 706
P SAEEALK+LL L D +Y+ +LG YD +L +VA SQ+DPKE+LP+L L+
Sbjct: 517 PSDPDAVSAEEALKYLLHLVDVNELYDHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTLK 576
Query: 707 SMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKM 766
M R+TID L+R+E A+ H+ G Y +CLNL+K L+ LKL + ++
Sbjct: 577 KMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPECLNLIKD-KNLYNEALKLYSPSSQQ 635
Query: 767 EQVLE-AWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDE 825
Q + A+ +HL +E A + C + EKA+ A+ GNW L VA L KD+
Sbjct: 636 YQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALSAFLTCGNWKQALCVAAQLNFTKDQ 695
Query: 826 VAKXXXXXXXXXXXXGKPGEAAKIALDYCG-DVTNGISLLIDARDWEEALRVAFMHRRED 884
+ K +AA + L+ C D + LL++ WEEALR+ + + R D
Sbjct: 696 LVGLGRTLAGKLVEQRKHIDAAMV-LEECAQDYEEAVLLLLEGAAWEEALRLVYKYNRLD 754
Query: 885 LI-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLD 943
+I T VK + LE + + ++ R +D + +
Sbjct: 755 IIETNVKPSILEAQKNYMAFLDSQTATFSRHKKRLLVVRELKEQAQQAGL-DDEVPHGQE 813
Query: 944 DDTVSETSSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEEM 1003
D SETSS SG + K +R + ++ GSP E++
Sbjct: 814 SDLFSETSSVVSGSEM------SGKYSHSNSRISARSSKNRRKAERKKHSLKEGSPLEDL 867
Query: 1004 ALVDHLKGM-SLTVGAKQELKSLVVFLVMLGEVDTARKLQDTGE-TFQLSQ 1052
AL++ L + T K E+ ++ L + + R+LQ E T QL +
Sbjct: 868 ALLEALSEVVQNTENLKDEVYHILKVLFLFEFDEQGRELQKAFEDTLQLME 918
Score = 227 (85.0 bits), Expect = 6.1e-65, Sum P(3) = 6.1e-65
Identities = 88/343 (25%), Positives = 157/343 (45%)
Query: 292 VSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPW 351
VS+ ++G++I++ N+ K S LQ G+I +Y+ + FP P+
Sbjct: 198 VSSSAAVDGVIISLCCNSKTK-SVVLQLADGQIFKYLWESPSLAIKPWKNSGGFPVRFPY 256
Query: 352 -MNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQ 410
+ G + +L GL D R ++ V +N +SF+ Y + L+L T
Sbjct: 257 PCTQTELAMIGEEECVL-GLTDRCRFFINDIEVASNITSFAVYDE-------FLLLTTHS 308
Query: 411 NLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVIL 470
+ + D L + HV + + ERG++++ V+ D ++L
Sbjct: 309 HTCQCFCLRDASFKTLQAGLSS-NHVSHGEVLRKV------ERGSRIVTVVPQD-TKLVL 360
Query: 471 QTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSAS 530
Q RGNLE ++ R LVL I L + F++A +R+ RIN N+I DH + FL +
Sbjct: 361 QMPRGNLEVVHHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDH-NPKVFLGNVE 419
Query: 531 EFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVS 590
F++Q++++++I F + E++T+T+Y P ++D + NK+
Sbjct: 420 TFIKQIDSVNHINLFFTELKEEDVTKTMY--------PAPVTSSVYLSRD---PDGNKID 468
Query: 591 SVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERI 633
V A+R +E P L ILT+ + P LE L+++
Sbjct: 469 LVCDAMRAVMESINPHKYC--LSILTSHVKKTTPELEIVLQKV 509
Score = 88 (36.0 bits), Expect = 6.1e-65, Sum P(3) = 6.1e-65
Identities = 32/111 (28%), Positives = 48/111 (43%)
Query: 103 MWHPTKPLQLICWTLDGQITTYNFIWTT--AVMENSTAL----VIDGSKILVTXXXXXXX 156
MW P P +L Y++ WTT +V +NS+ L VIDG+++LVT
Sbjct: 1 MWDPVTPYRLHVLCQGWHYLAYDWHWTTDRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVV 60
Query: 157 XXXXXXXXXKFPTAVTEMAFYSKSSK-NCLAAILSDGCLCVV---DLPAPD 203
FP V ++ F + K N LA + + + V D P+ D
Sbjct: 61 PPPMCTYQLLFPHPVNQVTFLAHPQKSNDLAVLDASNQISVYKCGDCPSAD 111
Score = 37 (18.1 bits), Expect = 1.3e-59, Sum P(3) = 1.3e-59
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 100 IRFMWHPTKPLQLICWTLDGQITTY 124
+ F+ HP K L QI+ Y
Sbjct: 78 VTFLAHPQKSNDLAVLDASNQISVY 102
>DICTYBASE|DDB_G0284075 [details] [associations]
symbol:elp1 "elongation protein 1" species:44689
"Dictyostelium discoideum" [GO:0016591 "DNA-directed RNA polymerase
II, holoenzyme" evidence=ISS] [GO:0016573 "histone acetylation"
evidence=ISS] [GO:0008023 "transcription elongation factor complex"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0004402 "histone
acetyltransferase activity" evidence=ISS] dictyBase:DDB_G0284075
Pfam:PF04762 GenomeReviews:CM000153_GR Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0016591
GO:GO:0004402 GO:GO:0008023 eggNOG:COG5290 KO:K11373 OMA:HPVNQVT
InterPro:IPR006849 PANTHER:PTHR12747 PIRSF:PIRSF017233
RefSeq:XP_638731.1 ProteinModelPortal:Q54Q66 STRING:Q54Q66
EnsemblProtists:DDB0231757 GeneID:8624401 KEGG:ddi:DDB_G0284075
InParanoid:Q54Q66 ProtClustDB:CLSZ2430296 Uniprot:Q54Q66
Length = 1390
Score = 588 (212.0 bits), Expect = 4.9e-62, Sum P(2) = 4.9e-62
Identities = 169/595 (28%), Positives = 300/595 (50%)
Query: 345 FPSSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSA-GQAMSH 403
FP+ CPW + ++ + GL+D +L+++ ++C +C+SF+ ++K +SH
Sbjct: 587 FPTPCPWFSSCTINQEDSV----VGLNDRNKLYINQSLLCTDCNSFALHNKFLLFTTVSH 642
Query: 404 LILATKQNLLFIVDISDILHGELALKYENFTHVGNRRKEENISY---INIWERGAKVIGV 460
++ + +LL + + ++ N+ ++ ++ +Y I ERG++++ V
Sbjct: 643 VLRSV--SLLAPPPTQPLTYVPVSNVIGNYVGHKSQALQQQSNYDDSIRDVERGSRIVAV 700
Query: 461 LHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHC 520
+ D ++LQ RGNLE + PR L L +I + ++ A + +RR+RI+ N I DH
Sbjct: 701 VPHD-TRLVLQMPRGNLEAISPRSLTLATIREMINNHQYLSAFLTMRRNRIDMNFIYDHN 759
Query: 521 GWQAFLQSASEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKD 580
F++ EFV Q+ + Y+ F+ ++ +E+ T+TL F+ L + P
Sbjct: 760 PTD-FIRHIEEFVDQIQQIDYLNLFISSLRDEDTTKTL-----FIDLETKHLLP--PTNV 811
Query: 581 FKASEC--NKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRE 638
K S KV+ V ++RK EK +S L ILTT + PP L++ L I+ +R
Sbjct: 812 VKPSSIVVGKVNLVCDSLRKVFMEK--DSIKFNLPILTTYVKKSPPELDQVLRLIQSLRG 869
Query: 639 TELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEF 698
E+ +++ + AEE+L ++++L D +Y+ ALG YD L +VA SQ+DPKE+
Sbjct: 870 EEI--NEQGETIVNRLAEESLDYIVFLVDVNKLYDIALGTYDFELVIMVAQKSQKDPKEY 927
Query: 699 LPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLM---KKYAQ-LFP 754
+P+LQEL+ M RY+ID L R+E AL ++ G Y DCL+L+ K Y + L
Sbjct: 928 IPFLQELQKMEKFYQRYSIDKYLSRWELALYNLSRAGKKYQQDCLDLIISNKIYKEALVN 987
Query: 755 LGLK-------LITDPAKM-EQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRAS 806
G LI + +M ++VL + D+L + FEDAA + + +K++ A+R +
Sbjct: 988 YGGSAADSDDNLIEEKDEMFKKVLNIYGDYLLESNQFEDAAYLFLQANQEKKSINAFRDA 1047
Query: 807 GNWSGVLTVAGLLKLGKDEVAKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTNGISLLID 866
G W ++ A L K+++ + K +AA+ L+ + I + +
Sbjct: 1048 GLWENAISQANKLSYTKEQLNQLVIELSEILKRNSKFQQAAQ-CLEKFQLIDQAIHMYCE 1106
Query: 867 ARDWEEALRVAFM----HRREDLITKVKHASLECASSLIGEYKEGLEKVGKYLTR 917
+ EAL ++ ++ E+ K+K + L+ S+ I E EK K TR
Sbjct: 1107 GYYFNEALLLSSSSSSSNQEEEQQIKIKKSLLDSLSNQINEINNNFEKYEKMSTR 1161
Score = 141 (54.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 76/350 (21%), Positives = 137/350 (39%)
Query: 767 EQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEV 826
++VL + D+L + FEDAA + + +K++ A+R +G W ++ A L K+++
Sbjct: 1008 KKVLNIYGDYLLESNQFEDAAYLFLQANQEKKSINAFRDAGLWENAISQANKLSYTKEQL 1067
Query: 827 AKXXXXXXXXXXXXGKPGEAAKIA-----LD-----YCGDVTNGISLLIDARDWEEALRV 876
+ K +AA+ +D YC +LL+ +
Sbjct: 1068 NQLVIELSEILKRNSKFQQAAQCLEKFQLIDQAIHMYCEGYYFNEALLLSSSS------- 1120
Query: 877 AFMHRREDLITKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSED 936
+ ++ E+ K+K + L+ S+ I E EK K TR
Sbjct: 1121 SSSNQEEEQQIKIKKSLLDSLSNQINEINNNFEKYEKMSTRIVIVRTNKLNYVPLLLP-- 1178
Query: 937 RSMNDLDDDTV-SETSSTFS--GMSVYXXXXXXXXXXXXXXXX------XXXXXXRESKR 987
R D + ++ S S FS GMSV R K+
Sbjct: 1179 RGQGDFETGSMMSGMSGMFSEGGMSVNSALSNVTTSSYVSTYSQQTGTFSTATKTRLKKK 1238
Query: 988 QRNRG--KIR----PGSPGEEMALVDHLKGMSLTVGAKQELKSLVVFLVMLGEVDTARKL 1041
+ + K+R GSP EE LVD +K + + ++ + ++ LV+LG + AR+L
Sbjct: 1239 DKKQKPQKVRITGKEGSPYEEDYLVDQMKKLIPSSSQQESIGRIIKGLVLLGLFNDARQL 1298
Query: 1042 QDTGETF-QLSQMAAIKLAEDTMSIDIINEHAHNMERYVQIVKLESQNSE 1090
+ + L + L+ +I N+ E+ +Q+ +LE Q +
Sbjct: 1299 STLYQKYLNLIDSSLDDLSASATAILPENKKEKEREQRLQLEQLEEQQQQ 1348
Score = 132 (51.5 bits), Expect = 4.9e-62, Sum P(2) = 4.9e-62
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLL 64
+ W P+G+ IA ++ E I F+ERNGL+ F + + ++ ++W+ S++L
Sbjct: 223 ISWRPNGSMIAV--SQRLEQTRHDISFFERNGLKHGEFTLRSK--GEIQSIQWSSDSEIL 278
Query: 65 AAVVRFE-EYDSV-KICFFSNNHWYLKYEIRYLRRDG-------IRFMWHPTKPLQLICW 115
+ E E SV ++ SN +W+LK EI+ + + W + P+ +
Sbjct: 279 GIQLYLEDEKRSVLQLWHRSNYYWFLKQEIQCGDSNNNNTNERIVNIQWDLSSPIVRVL- 337
Query: 116 TLDGQITTYNFIWTTAVMENS------TALVIDGSKILVT 149
T G+ + Y W V + S T +++DG+++ +T
Sbjct: 338 TQIGRFSEYRLCWDYDVSQGSSENNPTTVVMVDGNQLKLT 377
>SGD|S000004376 [details] [associations]
symbol:IKI3 "Subunit of Elongator complex" species:4932
"Saccharomyces cerevisiae" [GO:0033588 "Elongator holoenzyme
complex" evidence=IDA] [GO:0002098 "tRNA wobble uridine
modification" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR015943 SGD:S000004376
Pfam:PF04762 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
GO:GO:0015031 GO:GO:0006357 GO:GO:0006351 EMBL:BK006945
GO:GO:0002098 EMBL:U19104 eggNOG:COG5290 KO:K11373 OMA:HPVNQVT
GO:GO:0033588 InterPro:IPR006849 PANTHER:PTHR12747
PIRSF:PIRSF017233 GeneTree:ENSGT00390000013344 HOGENOM:HOG000188454
OrthoDB:EOG4578G4 EMBL:D87841 PIR:S51471 RefSeq:NP_013488.3
RefSeq:NP_013490.3 ProteinModelPortal:Q06706 SMR:Q06706
DIP:DIP-2384N IntAct:Q06706 MINT:MINT-567397 STRING:Q06706
PaxDb:Q06706 PeptideAtlas:Q06706 EnsemblFungi:YLR384C GeneID:851100
GeneID:851102 KEGG:sce:YLR384C KEGG:sce:YLR386W CYGD:YLR384c
KO:K15305 NextBio:967788 Genevestigator:Q06706 GermOnline:YLR384C
Uniprot:Q06706
Length = 1349
Score = 499 (180.7 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
Identities = 156/571 (27%), Positives = 269/571 (47%)
Query: 452 ERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRI 511
ERG+ ++ V+ +++V+LQ RGNLE +YPR +VL + ++ R+++A ++ R HRI
Sbjct: 712 ERGSILVSVIPS-KSSVVLQATRGNLETIYPRIMVLAEVRKNIMAKRYKEAFIVCRTHRI 770
Query: 512 NFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENIT-----ETLY----KKF 562
N +++ D+ + F+++ F+ Q+ + Y+ F+ ++ +++T ETLY K F
Sbjct: 771 NLDILHDYAP-ELFIENLEVFINQIGRVDYLNLFISCLSEDDVTKTKYKETLYSGISKSF 829
Query: 563 QFLSLPCREEFKDLPAKDF--KASECNKVSSVLLAIRKALEEKVPESPSREL-CILTTLA 619
P E + K F K S+ NK+ +L + L PE + L I+T A
Sbjct: 830 GMEPAPLTEMQIYMKKKMFDPKTSKVNKICDAVLNV--LLSN--PEYKKKYLQTIITAYA 885
Query: 620 RSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGLY 679
+P L AL K+I E E S+E + + +L +L D VY++AL LY
Sbjct: 886 SQNPQNLSAAL---KLISELE--NSEEK--------DSCVTYLCFLQDVNVVYKSALSLY 932
Query: 680 DLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHI--VSMGDS 737
D++LA +VA SQ DP+E+LP+LQEL+ PL ++ ID L +E AL+H+ + +
Sbjct: 933 DVSLALLVAQKSQMDPREYLPFLQELQDNEPLRRKFLIDDYLGNYEKALEHLSEIDKDGN 992
Query: 738 YHADCLNLMKKYAQLFPLGLKLIT-DPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSL 796
+ ++ ++ + L+ GL L D K + +A HLS + + DAA Y L
Sbjct: 993 VSEEVIDYVESH-DLYKHGLALYRYDSEKQNVIYNIYAKHLSSNQMYTDAAVAYEMLGKL 1051
Query: 797 EKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKXXXXXXXXXXXXGKPGEAAKIALDYCGD 856
++AM AY+++ W +++A ++ +EV + +AA I L+Y +
Sbjct: 1052 KEAMGAYQSAKRWREAMSIA--VQKFPEEVESVAEELISSLTFEHRYVDAADIQLEYLDN 1109
Query: 857 VTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGEYKEGLE-KVGKYL 915
V ++L A ++ A VA ++++L+ +V L +I E + ++ L
Sbjct: 1110 VKEAVALYCKAYRYDIASLVAIKAKKDELLEEVVDPGLGEGFGIIAELLADCKGQINSQL 1169
Query: 916 TRYXXXXXXXXXXXXXXXSEDRSMNDLDDDTVSETSSTFSGMSVYXXXXXXXXXXXXXXX 975
R ++ D SETS+ S + Y
Sbjct: 1170 RRLRELRAKKEENPYAFYGQETEQADDVSVAPSETSTQESFFTRYTGKTGGTAKTGASRR 1229
Query: 976 XXXXXXXRESKRQRNRGKIRPGSPGEEMALV 1006
R +R+R RGK G+ EE LV
Sbjct: 1230 TAKNK--RREERKRARGK--KGTIYEEEYLV 1256
Score = 189 (71.6 bits), Expect = 3.4e-58, Sum P(2) = 3.4e-58
Identities = 51/154 (33%), Positives = 77/154 (50%)
Query: 5 LEWMPSGANIAAVYDRKS---ENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMS 61
L W P G+ IA++ RK+ E ++F+ERNGL FD +D VE + WN S
Sbjct: 308 LSWKPQGSLIASI-QRKTDLGEEDSVDVIFFERNGLRHGEFDTRLPLDEKVESVCWNSNS 366
Query: 62 DLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQI 121
+ LA V+ + +++ N HWYLK E+ Y D WHP K L+ ++ G I
Sbjct: 367 EALAVVLA----NRIQLWTSKNYHWYLKQEL-YAS-DISYVKWHPEKDFTLM-FSDAGFI 419
Query: 122 TTYNFIW------TTAVMENSTALVIDGSKILVT 149
+F + T +N T+LV+DG + +T
Sbjct: 420 NIVDFAYKMAQGPTLEPFDNGTSLVVDGRTVNIT 453
Score = 41 (19.5 bits), Expect = 1.3e-42, Sum P(2) = 1.3e-42
Identities = 24/107 (22%), Positives = 43/107 (40%)
Query: 289 HAKVSTQIPLEGLVIAIAPN-NAKKYSAFL----QFHGGKISEYMSRVGLTGGALT---- 339
H + T++PL+ V ++ N N++ + L Q K + + L ++
Sbjct: 344 HGEFDTRLPLDEKVESVCWNSNSEALAVVLANRIQLWTSKNYHWYLKQELYASDISYVKW 403
Query: 340 HDDASFP---SSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIV 383
H + F S ++N+V P L D+G L V G+ V
Sbjct: 404 HPEKDFTLMFSDAGFINIVDFAYKMAQGPTLEPFDNGTSLVVDGRTV 450
>UNIPROTKB|Q2TAQ1 [details] [associations]
symbol:ikbkap "Putative elongator complex protein 1"
species:8355 "Xenopus laevis" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0008023 "transcription elongation
factor complex" evidence=ISS] [GO:0008607 "phosphorylase kinase
regulator activity" evidence=ISS] InterPro:IPR015943 Pfam:PF04762
GO:GO:0005737 Gene3D:2.130.10.10 GO:GO:0008607 GO:GO:0006357
GO:GO:0006351 GO:GO:0008023 KO:K11373 InterPro:IPR006849
PANTHER:PTHR12747 PIRSF:PIRSF017233 CTD:8518 HOVERGEN:HBG019038
EMBL:BC110776 RefSeq:NP_001089940.1 UniGene:Xl.19566 GeneID:735009
KEGG:xla:735009 Xenbase:XB-GENE-5813405 Uniprot:Q2TAQ1
Length = 1170
Score = 456 (165.6 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
Identities = 132/465 (28%), Positives = 226/465 (48%)
Query: 582 KASECNKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETEL 641
+ ++ KV V A+R A+E+ P+ L ILT+ R P LE AL+++ +RE+
Sbjct: 648 EGAKAKKVDIVCDAVRAAMEKWDPQKFC--LSILTSYVRRTIPQLEIALQKVHELRES-- 703
Query: 642 LGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPY 701
P + SA+EALK+LL+L D +Y+ +LG YD +L +VA SQ+DPKE+LP+
Sbjct: 704 -----PST-TIVSADEALKYLLFLVDVNELYDHSLGTYDFDLVVMVAEKSQKDPKEYLPF 757
Query: 702 LQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLIT 761
L +L+ M RYTID L+R++ AL ++ G Y + L+ +K + L+ L+L
Sbjct: 758 LNKLKKMETNYQRYTIDKHLKRYKKALSNLSKCGPDYFTEFLSFVKDQS-LYTEALELYP 816
Query: 762 D-PAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLK 820
+ + + A+ DHL + +E A Y C+S+EKA+ A+ ASGNW V+ +A L+
Sbjct: 817 HGTVEYKAINAAYGDHLVSKQQYELAGLIYARCNSIEKALDAFIASGNWHQVMCMASQLE 876
Query: 821 LGKDEVAKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMH 880
+++A K +AA + Y D I LL++ WEEALR+ + +
Sbjct: 877 YSGEKIAALARTVAGKLVEQRKQADAAVLLEQYAEDYEEAILLLLEGAHWEEALRLIYKY 936
Query: 881 RREDLI-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSM 939
R D++ T +K A L+ + + + ++ R ED +
Sbjct: 937 IRLDILETNLKPALLDAQRNHMILFDNQKTTFTRHKERLSVVREMKEKARLGLLDEDVT- 995
Query: 940 NDLDDDTVSETSSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSP 999
+ D S+TSS + K +R + ++ GSP
Sbjct: 996 GCAEADLFSDTSS------IMTASDASGKYSQSNSRISSRSSKNRRKAERKKHSLKEGSP 1049
Query: 1000 GEEMALVDHL-KGMSLTVGAKQELKSLVVFLVMLGEVDT-ARKLQ 1042
E++AL++ L + + + + ++ +L+ L++ E D A++LQ
Sbjct: 1050 LEDLALLEALAETIQMADKLRGDVHNLLKVLILF-EYDARAKELQ 1093
Score = 273 (101.2 bits), Expect = 3.5e-32, Sum P(2) = 3.5e-32
Identities = 117/430 (27%), Positives = 191/430 (44%)
Query: 252 FRGATLNEDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVSTQIPLEGLVIAIAPNNAK 311
FR T +D +QE + S H G V + G +I++ +
Sbjct: 346 FRLLTWVQDDTFLAVSQESNSSISTVHHMNTDQMDGQDINVRDVGTITGHIISLCYSPNT 405
Query: 312 KYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTNGPLKPLLFGLD 371
K+ A LQ GKI +Y+ D P V + + + ++ GL
Sbjct: 406 KHCA-LQTSNGKIWKYLCEYPTPAVEPWIDSMGQEVKFPQPCVQTALASIEGEDMVIGLT 464
Query: 372 DGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELALK-Y 430
+ RL ++ V +N +SF Y + L+L T + V + D +LK
Sbjct: 465 ERSRLFINNSEVASNITSFHLYEE-------FLLLTTHSHTCRCVSLRDT-----SLKAL 512
Query: 431 ENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSI 490
E + + +E I + ERG+++I V+ D +ILQ RGNLE ++ R LVL I
Sbjct: 513 ETQLNSASNPNDETIRKV---ERGSRIITVVPCD-TKLILQMPRGNLETIHHRALVLAQI 568
Query: 491 VNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAIN 550
L + F++A +R+ RIN N++ DH +AFL + F++Q+ +++YI F+ I
Sbjct: 569 RKWLDRLLFKEAFECMRKLRINLNLLYDH-NPKAFLDNVDLFIKQIGSVNYINLFLTEIK 627
Query: 551 NENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPSR 610
E++T+T+Y ++ E K AK KV V A+R A+E+ P+
Sbjct: 628 EEDVTKTMYPTHALSTMQSSEGAK---AK--------KVDIVCDAVRAAMEKWDPQKFC- 675
Query: 611 ELCILTTLARSDPPALEEALERIKIIRE---TELLGSDEPRR--MSYPSAEEALKHLLWL 665
L ILT+ R P LE AL+++ +RE T ++ +DE + + E H L
Sbjct: 676 -LSILTSYVRRTIPQLEIALQKVHELRESPSTTIVSADEALKYLLFLVDVNELYDHSLGT 734
Query: 666 ADSEAVYEAA 675
D + V A
Sbjct: 735 YDFDLVVMVA 744
Score = 174 (66.3 bits), Expect = 4.0e-52, Sum P(2) = 4.0e-52
Identities = 60/200 (30%), Positives = 86/200 (43%)
Query: 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDI---NEQIDSTVELLKWNCMS 61
L W PSGA IA+ + NK S++F+E+NGL F + QI ELL WN S
Sbjct: 95 LSWKPSGALIAS--SQSKPNK-HSVIFFEKNGLVHGEFTLPFTKGQI-KVKELL-WNSDS 149
Query: 62 DLLAAVVRFEEYDS------VKICFFSNNHWYLKYEIRYLRRDGIR----FMWHPTKPLQ 111
+LA + E D V++ N HWYLK + + D ++ MW P +
Sbjct: 150 TILAIWLEDNEKDESSSGCCVQLWTVGNYHWYLKQSLNF-GTDEMKKIECLMWDPENAYR 208
Query: 112 LICWTLDGQITTYNFIWTTAVMENSTA--LVIDGSKILVTXXXXXXXXXXXXXXXXKFPT 169
L ++ +++ W T + VIDG K+LVT +
Sbjct: 209 LHVFSTGWHYFCFDWFWGTDHSDGGQGDVAVIDGDKVLVTSFQQAVVPPPMSTYFIQLSC 268
Query: 170 AVTEMAFYSKSSKNCLAAIL 189
AV E+ F + KN AIL
Sbjct: 269 AVNEVTFQLEPKKNSGIAIL 288
>ASPGD|ASPL0000074831 [details] [associations]
symbol:AN10551 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0033588 "Elongator holoenzyme complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0002098 "tRNA wobble uridine modification" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF04762 Gene3D:2.120.10.30
InterPro:IPR011042 EMBL:BN001303 OMA:HPVNQVT InterPro:IPR006849
PANTHER:PTHR12747 PIRSF:PIRSF017233 HOGENOM:HOG000188454
EnsemblFungi:CADANIAT00006043 Uniprot:C8V8S8
Length = 1338
Score = 345 (126.5 bits), Expect = 4.9e-52, Sum P(4) = 4.9e-52
Identities = 118/479 (24%), Positives = 218/479 (45%)
Query: 587 NKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDE 646
+KV+ + ALE++ S + ++T PP LE L+ + +RE +
Sbjct: 806 SKVNRICDGFLTALEKR---SDTNLHNLITAHVCKLPPDLESGLQLVARLRE------ES 856
Query: 647 PRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELE 706
P + AE+A++H+ +L D+ +Y+ ALGLYDL L +VA +QRDP+E+LP+L++L+
Sbjct: 857 PEQ-----AEDAVEHMCFLTDANRLYDTALGLYDLELTLLVAQQAQRDPREYLPFLRKLQ 911
Query: 707 SMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPAK 765
+P L + ID L R++ AL H+ G H + + K+ L+ + + +P +
Sbjct: 912 QLPDLRRFFEIDNYLGRWQKALGHL--HGLHAHDELREYVVKHV-LYKDAIDIYKYEPEQ 968
Query: 766 MEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDE 825
+ + +ADHL ++DA Y S A K Y+ + W L A L+ L +DE
Sbjct: 969 LRDITHLYADHLYQESQYKDAGIAYESLSMYTDAYKCYQLAHLWRESLYTAMLVPLSQDE 1028
Query: 826 VAKXXXXXXXXXXXXGKPGEAA-KIALDYCGDVTNGISLLIDARDWEEALRVAFMHRRED 884
+ K AA +I ++ D+ LL + EA R+ +H +
Sbjct: 1029 LTTHATDLATTLVEENKDYLAASQIHAEHLHDIPTAARLLCRGARYSEATRLLTLHSVQS 1088
Query: 885 LITKVKHASLECA----SSLIGEYKEGLE----KVGKYLTRYXXXXXXXXXXXXXXXSED 936
LI ++ +L A + L+ +++ L+ ++ + R
Sbjct: 1089 LIPEIVDVALADAMGSMTDLLADFRSQLQAQVPRIAELRVRRIQDPLAYFGGDPTATDGA 1148
Query: 937 RSMNDLDDDTVSET-SSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIR 995
++ D+ +++ T +ST +G S++ R+ +R+R RGK
Sbjct: 1149 AGVDIPDNVSLAATDASTLAGKSMFTRYTGKTSSGKTTSSRQSSRNRRKEERKRARGK-- 1206
Query: 996 PGSPGEEMALVDHLKGMSLTVGAK-QELKSLVVFLVMLGEVDTARKLQD-TGETFQLSQ 1052
G+ EE LV+ ++ + VG E+++LV L+ G + A ++ T + +L +
Sbjct: 1207 KGTVYEEEYLVNSVRRLIERVGTTVPEVENLVDSLLRRGMRERAAAIEKATRDVLKLCE 1265
Score = 205 (77.2 bits), Expect = 4.9e-52, Sum P(4) = 4.9e-52
Identities = 56/189 (29%), Positives = 98/189 (51%)
Query: 452 ERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRI 511
ERG++++ V+ AV+LQ RGN+E +YPR LVL I + + + +R A + R +
Sbjct: 676 ERGSRLVTVMPS-AFAVVLQAPRGNIETIYPRALVLAGIRSFIDKKDYRSAFLTCRSQMV 734
Query: 512 NFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENITETLYKK-FQFLSLPCR 570
+ N+I D+ Q F++S + FV QV + ++ EF+ + E++++TLYK + L +
Sbjct: 735 DMNLIHDYAPEQ-FMESITLFVDQVKRVDFVDEFLSRLKEEDVSQTLYKDTLKALDMEVA 793
Query: 571 EEFKDLPAKDFKASECNKV-SSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEA 629
E K S+ N++ L A+ K + + + +C L PP LE
Sbjct: 794 AE-TGFTMTGKKGSKVNRICDGFLTALEKRSDTNLHNLITAHVCKL-------PPDLESG 845
Query: 630 LERIKIIRE 638
L+ + +RE
Sbjct: 846 LQLVARLRE 854
Score = 125 (49.1 bits), Expect = 4.9e-52, Sum P(4) = 4.9e-52
Identities = 41/124 (33%), Positives = 62/124 (50%)
Query: 2 GAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDIN--EQIDSTVEL---LK 56
GA L W P G IA + ++ +++ +VF+ERNGL F + E+ ST L
Sbjct: 263 GA-LSWRPYGNLIAGI--QRLDDRI-DVVFFERNGLRHGQFTLRLTEEERSTWASNIHLS 318
Query: 57 WNCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYL-RRDG-IRFMWHPTKPLQLIC 114
WN S +LA V+F+ D ++ N H+YLK EI + +G + WH K L+ +
Sbjct: 319 WNVDSTVLA--VQFK--DRIQFWTSGNYHYYLKQEIPVIVSSEGPFAYKWHHEKALRFVA 374
Query: 115 WTLD 118
D
Sbjct: 375 GASD 378
Score = 69 (29.3 bits), Expect = 3.1e-46, Sum P(4) = 3.1e-46
Identities = 28/123 (22%), Positives = 48/123 (39%)
Query: 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLL 64
+ W GA +A + E +I Y R G S ++E +D L W +L+
Sbjct: 220 ITWRGDGAFVAV--NSIVEGIRRAIRVYSREGTLDS---VSEPVDGLEGALSWRPYGNLI 274
Query: 65 AAVVRFEEYDSVKICFFSNNHW-YLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITT 123
A + R + D + + FF N + ++ +R + R W L W +D +
Sbjct: 275 AGIQRLD--DRIDVVFFERNGLRHGQFTLRLTEEE--RSTWASNIHLS---WNVDSTVLA 327
Query: 124 YNF 126
F
Sbjct: 328 VQF 330
Score = 58 (25.5 bits), Expect = 4.9e-52, Sum P(4) = 4.9e-52
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 366 LLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDI 418
+L L G L+ + K++ NC+SF S SH+I T +LL V +
Sbjct: 608 VLISLSRTGGLYANKKLLAKNCTSFLLTS-------SHVIFTTSLHLLKFVHL 653
>FB|FBgn0037926 [details] [associations]
symbol:Elp1 "Elongator complex protein 1" species:7227
"Drosophila melanogaster" [GO:0007165 "signal transduction"
evidence=NAS] [GO:0006952 "defense response" evidence=NAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0008607 "phosphorylase kinase regulator
activity" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008023 "transcription elongation factor complex" evidence=ISS]
[GO:0016246 "RNA interference" evidence=IMP] Pfam:PF04762
EMBL:AE014297 GO:GO:0005737 GO:GO:0016246 Gene3D:2.120.10.30
InterPro:IPR011042 GO:GO:0008607 GO:GO:0006357 GO:GO:0006351
GO:GO:0008023 eggNOG:COG5290 KO:K11373 OMA:HPVNQVT
InterPro:IPR006849 PANTHER:PTHR12747 PIRSF:PIRSF017233
EMBL:AY119562 RefSeq:NP_650098.1 UniGene:Dm.6629
ProteinModelPortal:Q9VGK7 SMR:Q9VGK7 IntAct:Q9VGK7 MINT:MINT-937484
STRING:Q9VGK7 PaxDb:Q9VGK7 EnsemblMetazoa:FBtr0082420 GeneID:41399
KEGG:dme:Dmel_CG10535 UCSC:CG10535-RA CTD:41399 FlyBase:FBgn0037926
GeneTree:ENSGT00390000013344 InParanoid:Q9VGK7 OrthoDB:EOG4G1JXG
PhylomeDB:Q9VGK7 GenomeRNAi:41399 NextBio:823674 Bgee:Q9VGK7
Uniprot:Q9VGK7
Length = 1252
Score = 337 (123.7 bits), Expect = 2.3e-49, Sum P(4) = 2.3e-49
Identities = 96/370 (25%), Positives = 172/370 (46%)
Query: 655 AEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMR 714
A++ L+HLL+L D +Y ALG YD L VA SQ+DPKEFLPYL +L+++P +
Sbjct: 803 ADQLLQHLLYLVDVNDLYNVALGTYDFGLVLFVAQKSQKDPKEFLPYLNDLKALPIDYRK 862
Query: 715 YTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQ-VLEAW 773
+ ID L+R+ +AL H+ + G+ ++ + L ++K+ L+ GL + + ++ + A+
Sbjct: 863 FRIDDHLKRYTSALSHLAACGEQHYEEALEYIRKHG-LYTDGLAFYREHIEFQKNIYVAY 921
Query: 774 ADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKXXXXX 833
ADHL + ++A+ Y L++A+ + + + +W VL +A L D+VA+
Sbjct: 922 ADHLRAIAKLDNASLMYERGGQLQQALLSAKHTLDWQRVLVLAKKLSEPLDQVAQSLVGP 981
Query: 834 XXXXXXXGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHAS 893
G+ EA ++ ++C D +L++ + A+ A + +D+ K+ A
Sbjct: 982 LQQQ---GRHMEAYELVKEHCQDRKRQFDVLLEGHLYSRAIYEAGLED-DDVSEKIAPAL 1037
Query: 894 LECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLD--DDTVSETS 951
L L + L+ Y R D ++ ++D DT S S
Sbjct: 1038 LAYGVQLESSLQADLQLFLDYKQRLLDIRRNQAKSGEGYIDTDVNLKEVDLLSDTTSLHS 1097
Query: 952 STFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEEMALVDHLKG 1011
S +SG S K +R ++PG+P E++AL+D L
Sbjct: 1098 SQYSGTS-------------RRTGKTFRSSKNRRKHERKLFSLKPGNPFEDIALIDALHN 1144
Query: 1012 MSLTVGAKQE 1021
+ +Q+
Sbjct: 1145 HVTKIAQQQQ 1154
Score = 196 (74.1 bits), Expect = 2.3e-49, Sum P(4) = 2.3e-49
Identities = 45/128 (35%), Positives = 77/128 (60%)
Query: 432 NFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIV 491
+F + +RR+ ++ NI ERGAK++ + +A V+LQ RGNLE + PR LVL +
Sbjct: 611 HFVQLDDRRQ---VASRNI-ERGAKIVTAV-ARKARVVLQLPRGNLEAICPRVLVLELVG 665
Query: 492 NALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINN 551
+ L +G+++ A+ M R+ RIN N+I DH + F+ S F+ +N ++ F+ + N
Sbjct: 666 DLLERGKYQKAIEMSRKQRINLNIIFDH-DVKRFVSSVGAFLNDINEPQWLCLFLSELQN 724
Query: 552 ENITETLY 559
E+ T+ +Y
Sbjct: 725 EDFTKGMY 732
Score = 132 (51.5 bits), Expect = 2.3e-49, Sum P(4) = 2.3e-49
Identities = 52/180 (28%), Positives = 79/180 (43%)
Query: 7 WMPSGANIAAVYDRKSENKCPSIVFYERNGLERSS----FDINEQIDSTVELLKWNCMSD 62
W P+G N AV ++ NK +I +E+NGL FD+ E+ V L+W+ SD
Sbjct: 240 WRPTG-NWIAV-PQQFPNKS-TIALFEKNGLRHRELVLPFDLQEE---PVVQLRWSEDSD 293
Query: 63 LLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFM-WHPTKPLQLICWTL--DG 119
+LA +E V + N HWYLK + + + D + + W + L G
Sbjct: 294 ILAIRTCAKEEQRVYLYTIGNYHWYLKQVLIFEQADPLALLHWDTRCGAEHTLHVLKESG 353
Query: 120 QITTYNFIWTTAVMENSTAL-VIDGSKILVTXXXXXXXXXXXXXXXXKFPTAVTEMAFYS 178
+ Y W AV N++ + VIDG ++L+T KF T + AF S
Sbjct: 354 KHLVYR--WAFAVDRNNSIVGVIDGKRLLLTDFDEAIVPPPMSKIVLKFETYIN--AFIS 409
Score = 41 (19.5 bits), Expect = 2.3e-49, Sum P(4) = 2.3e-49
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 288 WHAKVSTQIPLEGLV--IAIAP 307
W +V + + + GLV +A+AP
Sbjct: 491 WFYRVHSSVRINGLVNAVAVAP 512
Score = 41 (19.5 bits), Expect = 2.4e-33, Sum P(4) = 2.4e-33
Identities = 6/12 (50%), Positives = 12/12 (100%)
Query: 410 QNLLFIVDISDI 421
Q+LL++VD++D+
Sbjct: 808 QHLLYLVDVNDL 819
>POMBASE|SPBC36.07 [details] [associations]
symbol:elp1 "elongator subunit Elp1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002098 "tRNA wobble
uridine modification" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0033588 "Elongator holoenzyme complex"
evidence=ISO] InterPro:IPR015943 PomBase:SPBC36.07 Pfam:PF04762
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 GO:GO:0015031
EMBL:CU329671 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0002098
eggNOG:COG5290 KO:K11373 OMA:HPVNQVT GO:GO:0033588
InterPro:IPR006849 PANTHER:PTHR12747 PIRSF:PIRSF017233 PIR:T40302
RefSeq:NP_595335.1 IntAct:O59704 STRING:O59704
EnsemblFungi:SPBC36.07.1 GeneID:2541017 KEGG:spo:SPBC36.07
HOGENOM:HOG000188454 OrthoDB:EOG4578G4 NextBio:20802131
Uniprot:O59704
Length = 1253
Score = 308 (113.5 bits), Expect = 3.0e-49, Sum P(3) = 3.0e-49
Identities = 110/462 (23%), Positives = 210/462 (45%)
Query: 587 NKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDE 646
NKV+ + IR+ L K ++ + I+T+ PP +E AL I + + + S+
Sbjct: 764 NKVNLLCKIIREHLTSKYGDTHFQ--AIITSYLCESPPKIEAALGMISGLIKAQ---SE- 817
Query: 647 PRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELE 706
+ + A++H+ +L D +++ ALGLYDL LA ++A SQ+DP+E++P+L E +
Sbjct: 818 -------TVDLAIEHMCFLVDVNMLFDHALGLYDLKLALLIAQQSQKDPREYVPFLHEFQ 870
Query: 707 SMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPAK 765
L ++ ID L+R+E AL H+ M +++ + N ++ +L+P L+L D
Sbjct: 871 KQESLRRKFNIDCYLKRYERALGHLKEMENAFD-EFKNFTIQH-KLYPRALELYKYDKEA 928
Query: 766 MEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDE 825
++VL +A +L + +AA Y + +A++AY+++G W L++ +D
Sbjct: 929 QKEVLIIFAQYLRENGKSNEAAIAYESVGKISEAIEAYKSAGMWRECLSILQQTTNSEDL 988
Query: 826 VAKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRR--- 882
+ + + +A I L Y + + + + EA+R+A
Sbjct: 989 IRETAEDLASLCIEKREHCDAGSINLLYLSNPREAVIQMCKGSQYSEAIRIARATGDSSI 1048
Query: 883 -EDLITKVKHASLECASSLIGEYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMND 941
+DL+ V S AS L+ +++ ++ + + ED++ +D
Sbjct: 1049 YKDLLISVLGESFGEASELVADFRNQIKSQTERILVLREKKKEDPISWMEGTMEDQTPDD 1108
Query: 942 LDDDTVSETSSTFSGMSVYXXXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGE 1001
+ +++ TS + + S+Y R +R+R RGK G+ E
Sbjct: 1109 I---SLASTSLS-TNRSLYTQYTKSSNSSKMTRNTSKNN--RRLERKRARGK--KGTVFE 1160
Query: 1002 EMALVDHLKGMSLTVGA-KQELKSLVVFLVMLGEVDTARKLQ 1042
E LV+ L+ + V + E+ L+ LV A +LQ
Sbjct: 1161 EEYLVNSLRRLIARVEEIRPEVHRLLEALVRCNMTTQASELQ 1202
Score = 178 (67.7 bits), Expect = 3.0e-49, Sum P(3) = 3.0e-49
Identities = 67/265 (25%), Positives = 124/265 (46%)
Query: 369 GLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELAL 428
GL GRL+ +++ SF F ++ ++ T +NLL V + + +L +
Sbjct: 574 GLTSYGRLYAEQRLLSTGVLSF-FCTER------FVLFTTTKNLLKFVHLVSTVD-DLQV 625
Query: 429 KYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLT 488
++ R +E + ERG+K++ + + AV+LQ RGNLE +YPR +VL
Sbjct: 626 VEDDAVD----RHDERCRVV---ERGSKIVASMPS-KMAVVLQMPRGNLETIYPRIMVLD 677
Query: 489 SIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCA 548
+ + ++ DA + R HR++ N++ D+ FL++ FV + + Y+ F+ +
Sbjct: 678 GVRTYIKALKYGDAFKVCRTHRLDLNILFDYDP-DLFLKNIPVFVDGLYRVDYLDLFLTS 736
Query: 549 INNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESP 608
+ EN+T +Y + K + + NKV+ + IR+ L K ++
Sbjct: 737 LKPENVTTGMYS----------DTSKSQSQQSVTTID-NKVNLLCKIIREHLTSKYGDTH 785
Query: 609 SRELCILTTLARSDPPALEEALERI 633
+ I+T+ PP +E AL I
Sbjct: 786 FQ--AIITSYLCESPPKIEAALGMI 808
Score = 174 (66.3 bits), Expect = 3.0e-49, Sum P(3) = 3.0e-49
Identities = 48/152 (31%), Positives = 73/152 (48%)
Query: 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSD 62
++L W PSG+ +A + S+N ++F+ERNGL F + + D L WN S
Sbjct: 256 SLLSWKPSGSVLATIKSDSSDNSS-KVIFFERNGLRHGEFSLRRREDEKYTGLAWNVSSS 314
Query: 63 LLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWT---LDG 119
+LA V E +SV + N HWYLK EI + ++ + WHP L ++
Sbjct: 315 ILA--VSTE--NSVMLWTTGNYHWYLKKEIN-IPQNAL-ISWHPEHANTLYITGKNHIEK 368
Query: 120 QITTYNFIWTTAVMENSTAL--VIDGSKILVT 149
+ ++ + N L VIDGS +LVT
Sbjct: 369 VVFDLKYVTEFSTSPNDFGLIPVIDGSSLLVT 400
Score = 69 (29.3 bits), Expect = 2.6e-38, Sum P(3) = 2.6e-38
Identities = 28/106 (26%), Positives = 45/106 (42%)
Query: 28 SIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWY 87
+I Y R GL S I+E D LL W +LA + +S K+ FF N
Sbjct: 234 AIRVYSREGLLDS---ISEPQDGQQSLLSWKPSGSVLATIKSDSSDNSSKVIFFERNG-- 288
Query: 88 LKY-EIRYLRRDGIRFM---WHPTKPLQLICWTLDGQI-TTYNFIW 128
L++ E RR+ ++ W+ + + + + TT N+ W
Sbjct: 289 LRHGEFSLRRREDEKYTGLAWNVSSSILAVSTENSVMLWTTGNYHW 334
Score = 37 (18.1 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 387 CSSFSFYSKSAGQAMSH 403
CS F+ S+G+ +S+
Sbjct: 524 CSEMLFFQTSSGKLISY 540
Score = 37 (18.1 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 537 NNLSYITEFVCAINNENITETLYK 560
N++S VC ++NEN +Y+
Sbjct: 25 NSISDKIYVVCGLDNENPGIEIYE 48
>UNIPROTKB|G4MTL1 [details] [associations]
symbol:MGG_07174 "Elongator complex protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR015943 Pfam:PF04762 Gene3D:2.130.10.10 GO:GO:0043581
EMBL:CM001232 KO:K11373 InterPro:IPR006849 PANTHER:PTHR12747
PIRSF:PIRSF017233 RefSeq:XP_003715376.1 EnsemblFungi:MGG_07174T0
GeneID:2683157 KEGG:mgr:MGG_07174 Uniprot:G4MTL1
Length = 1305
Score = 418 (152.2 bits), Expect = 6.2e-49, Sum P(3) = 6.2e-49
Identities = 159/609 (26%), Positives = 267/609 (43%)
Query: 452 ERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRI 511
ERGA+++ + + V+LQ RGNLE ++PR +V+ I + + A R R+
Sbjct: 649 ERGARLVTAVPSN-MNVVLQMPRGNLETIFPRAMVVAGIRKLINDKNYARAFSYCRTQRV 707
Query: 512 NFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCRE 571
+ N++ DH Q FL + F+ Q+ + SYI + ++ E++T+T+YK +
Sbjct: 708 DMNILYDHRPEQ-FLANVGLFLDQLGDTSYIDLVLSSLREEDVTQTMYKDTKKSKPAWAP 766
Query: 572 EFKDLPAKDFKAS------ECNKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPA 625
LP+++ S +KV++V A+ K LE + P S I+T +PPA
Sbjct: 767 SSTPLPSQENPPSVSLSDPSSSKVNTVCDAVLKELEARNPASLQN---IITAHVCKNPPA 823
Query: 626 LEEALERIK-IIRETELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLA 684
L++ L I +++E E L AE+A++H+ +L D +Y+ ALGLY+L LA
Sbjct: 824 LDDGLSVIAGLMKENEAL------------AEKAVEHICFLVDVNRLYDNALGLYNLELA 871
Query: 685 AIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLN 744
+VA SQRDP+E+LP++Q L + L +TID L E AL H+ + DS +
Sbjct: 872 LLVAQQSQRDPREYLPFVQSLHQLSQLRRCFTIDDHLGNREKALGHLKA--DSDFEGVKD 929
Query: 745 LMKKYAQLFPLGLKLITDPAKMEQVLEA-WADHLSDVKCFEDAATTYFCCSSLEKAMKAY 803
K++ L+ L L A+ + L A +A++L +A Y +AM Y
Sbjct: 930 YAVKHS-LYQDALGLYRYEAEQSRTLMALYAEYLESNSRNREAGLAYEALGKFAEAMSCY 988
Query: 804 RASG--NWSGVLTVAGLLKLG--KDEVAKXXXXXXXXXXXXGKPGEAAKIALDYCGDVTN 859
RA+G +W L A + K + + AA I D+ D
Sbjct: 989 RAAGPSSWRECLAAAQKQQPPPTKSSLTELAESLADALNEAKDYVGAATIQRDFLNDPAT 1048
Query: 860 GISLLIDARDWEEALRVAFMHRREDLITKVKHASLEC-ASS--LIGEYKEGLEKVGKYLT 916
I LL + +A+ +A L +V E ASS L+ + K L+ +
Sbjct: 1049 AIQLLCKGSLFADAMLLAATSSEAGLDGEVDSGLTEAFASSTELLADCKAQLKAQTPRIL 1108
Query: 917 RYXXXXXXXXXXXXXXXSEDRSMNDLDDD-TVSETSSTFSGMSVYXXXXXXXXXXXXXXX 975
D+ DD +V+ +S + S++
Sbjct: 1109 DLRRKAAEDPLGFYEGERPGGGDGDMPDDVSVAASSRLSTSASLFTRYTGKEGSIGTAGT 1168
Query: 976 XXXXXXXRESKRQ-RNRGKIRPGSPGEEMALVDHLKGMSLTVGAKQ-ELKSLVVFLVMLG 1033
+ KR+ + R + R G+ EE LV+ + + V + E ++LV L G
Sbjct: 1169 GVSRATHKNRKREEKKRARGRKGTVYEEEYLVNSTRRLIERVNSVGGETEALVAGLFRRG 1228
Query: 1034 EVDTARKLQ 1042
++ AR ++
Sbjct: 1229 MLEQARAVE 1237
Score = 163 (62.4 bits), Expect = 6.2e-49, Sum P(3) = 6.2e-49
Identities = 55/189 (29%), Positives = 86/189 (45%)
Query: 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDIN---EQIDSTVEL-LKWNCM 60
+ W PSG N+ A R S+ +VF+ERNGL F + + + + + + L+WN
Sbjct: 262 MSWRPSG-NLIAGIQRLSDRV--DVVFFERNGLRHGQFTLRFPPDLLSTNIPINLEWNPD 318
Query: 61 SDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKP--LQLICWTLD 118
S +LA V F +V++ N HWYLK EIR R WHP KP L L+C
Sbjct: 319 STVLA--VSFG--GTVQLWAMGNYHWYLKQEIR-CASTCFRPSWHPEKPMRLSLVC---K 370
Query: 119 GQITTYNFIWTTA---VM---ENSTALVIDGSKILVTXXXXXXXXXXXXXXXXKFPTAVT 172
+ +++ T+ ++ + VIDG+ I +T + T V
Sbjct: 371 NSVAHTEWVFHTSRGSILPPHDYGAVAVIDGNNIKITPFRTATIPPPMAMFELEAATCVI 430
Query: 173 EMAFYSKSS 181
++AF +S
Sbjct: 431 DVAFTPNNS 439
Score = 71 (30.1 bits), Expect = 6.2e-49, Sum P(3) = 6.2e-49
Identities = 20/77 (25%), Positives = 36/77 (46%)
Query: 345 FPSSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHL 404
F + PW V+ + L G+ GG+L+ + +++ NC+SF G HL
Sbjct: 564 FSTQLPWAEVILHDDS----TLAVGMSRGGQLYANTRLLAKNCTSFVV----TGD---HL 612
Query: 405 ILATKQNLLFIVDISDI 421
I T + L +V ++ +
Sbjct: 613 IFTTTNHFLKLVHLTGV 629
Score = 65 (27.9 bits), Expect = 1.0e-38, Sum P(3) = 1.0e-38
Identities = 21/80 (26%), Positives = 33/80 (41%)
Query: 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLL 64
+ W GA +A R + I Y R G+ S+ +E +D + W +L+
Sbjct: 217 ISWREDGAYVAINSVRAGSRRV--IRVYTREGVLDSA---SEPVDCLEGSMSWRPSGNLI 271
Query: 65 AAVVRFEEYDSVKICFFSNN 84
A + R D V + FF N
Sbjct: 272 AGIQRLS--DRVDVVFFERN 289
>WB|WBGene00022463 [details] [associations]
symbol:elpc-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0002098
"tRNA wobble uridine modification" evidence=IGI;IMP] [GO:0043025
"neuronal cell body" evidence=IDA] [GO:0006412 "translation"
evidence=IGI;IMP] [GO:0008355 "olfactory learning" evidence=IMP]
[GO:0048598 "embryonic morphogenesis" evidence=IGI] [GO:0040025
"vulval development" evidence=IGI] [GO:0048599 "oocyte development"
evidence=IGI] [GO:0007283 "spermatogenesis" evidence=IGI]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0003968
"RNA-directed RNA polymerase activity" evidence=ISS] [GO:0001172
"transcription, RNA-dependent" evidence=ISS] InterPro:IPR015943
Pfam:PF04762 GO:GO:0009792 GO:GO:0005737 GO:GO:0008355
Gene3D:2.130.10.10 GO:GO:0006412 GO:GO:0048598 GO:GO:0043025
GO:GO:0043005 GO:GO:0007283 EMBL:FO080728 GO:GO:0040025
GO:GO:0048599 GO:GO:0002098 eggNOG:COG5290 KO:K11373
InterPro:IPR006849 PANTHER:PTHR12747 PIRSF:PIRSF017233
GeneTree:ENSGT00390000013344 OMA:NANLLCS GO:GO:0003968
RefSeq:NP_491524.1 ProteinModelPortal:Q9N595 SMR:Q9N595
STRING:Q9N595 PaxDb:Q9N595 EnsemblMetazoa:Y110A7A.16 GeneID:172143
KEGG:cel:CELE_Y110A7A.16 UCSC:Y110A7A.16 CTD:172143
WormBase:Y110A7A.16 HOGENOM:HOG000019279 InParanoid:Q9N595
NextBio:874199 GO:GO:0001172 Uniprot:Q9N595
Length = 1250
Score = 180 (68.4 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 99/466 (21%), Positives = 191/466 (40%)
Query: 614 ILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYE 673
+LT L RS P + + L+ ++ E + R+ + +L H+ + ++ ++
Sbjct: 771 LLTALLRSKPSKVNDCLKEVQ--EHVEKIAD---RKDVF--TRNSLHHISFFVPAKELFN 823
Query: 674 AALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMR-YTIDLRLQRFENALKHIV 732
AL YDL LA VA S DPKE+LP L +L + L R Y I++ + + +A+ +
Sbjct: 824 CALSTYDLKLAQQVAEASNYDPKEYLPVLNKLNRVMCTLERQYRINVVREAWIDAVSSLF 883
Query: 733 SMGDS--------YHADCLNLMKKYAQLFPLGLKLITD-PAKMEQVLEAWADHLSDVKCF 783
+ S + D +++++ +L+ L L+ + +Q E +A L +
Sbjct: 884 LLDSSKERGSEETWWNDIEDIIQR-EKLYQDALTLVKPGDRRYKQCCELYAAELERKVHW 942
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKXXXXXXXXXXXXGKP 843
+AA Y + EK +K + S + G+ A L + ++ +P
Sbjct: 943 REAALFYELSGNSEKTLKCWEMSRDVDGLAASARRLAVDAGKLKIHAIKMSTTLREARQP 1002
Query: 844 GEAAKIALDYCGDV-TNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIG 902
E AK AL G T + +L DA +W +A R + + E L K A+L ++
Sbjct: 1003 KELAK-ALKLAGSSSTQIVHVLCDAFEWLDASREVEVGKEEAL----KKAALSRNDQVLM 1057
Query: 903 EYKEGLEKVGKYLTRYXXXXXXXXXXXXXXXSEDRSMNDLDDD-TVSETSSTFSGMSVYX 961
+ + + Y R + + ++DL DD +V + S+ SG S
Sbjct: 1058 DLERRKTEFENYKKRLAVVRENKLKRVEQFAAGE--VDDLRDDISVISSISSRSGSS--- 1112
Query: 962 XXXXXXXXXXXXXXXXXXXXXRESKRQRNRGKIRPGSPGEEMALVDHL-KGMSLTVGAKQ 1020
R + ++ + ++ G E+ AL++ L +
Sbjct: 1113 ------------KVSMASTVRRRKQIEKKKSSLKEGGEYEDSALLNVLSENYRWLENIGN 1160
Query: 1021 ELKSLVVFLVMLGEVDTARKLQDTGETFQLS-QMAAIKLAEDTMSI 1065
EL L++ L+ +G + KL+ + F Q + + +++S+
Sbjct: 1161 ELSQLILVLITVGNFPESLKLRSAYDEFATKLQKSKAAIWPESLSV 1206
Score = 91 (37.1 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 36/178 (20%), Positives = 75/178 (42%)
Query: 353 NVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNL 412
N+ +G N K + +DG + ++ K F S +H ++ ++
Sbjct: 536 NIGWIGVNPSNKHVEIASNDGKFIDLNTKEELFKIDKFE--STEVHFIQNHHVIQVDNSM 593
Query: 413 LFIVD-------ISDILHGE--LALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHG 463
LF+ IS + G L + ++N + + + + E G +++
Sbjct: 594 LFLDSERVSQDAISILTRGSDILLIDFDNKLRFIDAESGKTLEDVRNVEAGCELVAC-DS 652
Query: 464 DEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCG 521
A VILQ RGNLE + PR+ V+ + L + + + +++HR++ + + + G
Sbjct: 653 QSANVILQAARGNLETIQPRRYVMAHTRDLLDRKEYIASFKWMKKHRVDMSFAMKYKG 710
Score = 67 (28.6 bits), Expect = 2.4e-15, Sum P(3) = 2.4e-15
Identities = 21/79 (26%), Positives = 40/79 (50%)
Query: 12 ANI--AAVYDRKSENKCPSIVFYERNGLERSSFDIN---EQIDST--VELLKWNCMSDLL 64
AN+ +A+ + S+++ IV YERNG R+S+ + QI+ +E ++WN +L
Sbjct: 245 ANLLCSAIQENGSDDR---IVIYERNGETRNSYVVKWPANQIEDRRIIEKIEWNSTGTIL 301
Query: 65 AAVVRFEEYDSVKICFFSN 83
+ + ++ SN
Sbjct: 302 SMQTSLGKKHQLEFWHLSN 320
Score = 42 (19.8 bits), Expect = 8.4e-13, Sum P(3) = 8.4e-13
Identities = 19/90 (21%), Positives = 38/90 (42%)
Query: 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLL 64
+ W G I AV S+N ++ ++RNG ++ +I S K N ++LL
Sbjct: 192 VHWRWDG-EIVAVSFYSSQNDTRNLTVFDRNGEILNNMNIRNIYLSHCFAHKPN--ANLL 248
Query: 65 AAVVRFEEYDSVKICFFSNNHWYLKYEIRY 94
+ ++ D + + N Y +++
Sbjct: 249 CSAIQENGSDDRIVIYERNGETRNSYVVKW 278
Score = 39 (18.8 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 171 VTEMAFYSKSSKNCLAAILSDG-CLCVVDLPAPDMLEDLEGTEFVVEA 217
V ++F ++ N + IL+DG L V D D LE E T+ V A
Sbjct: 63 VISLSF--RTDGNQIVVILADGRALIVEDGEVMD-LEIAELTDTTVSA 107
Score = 37 (18.1 bits), Expect = 2.7e-12, Sum P(3) = 2.7e-12
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 38 ERSSFDINEQIDSTVELLKWNCMSDLLA 65
E +I E D+TV +W LA
Sbjct: 91 EVMDLEIAELTDTTVSAAEWTADEQTLA 118
>UNIPROTKB|F1P5L4 [details] [associations]
symbol:IKBKAP "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IEA] [GO:0008023 "transcription elongation
factor complex" evidence=IEA] [GO:0008607 "phosphorylase kinase
regulator activity" evidence=IEA] [GO:0016591 "DNA-directed RNA
polymerase II, holoenzyme" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0033588 "Elongator
holoenzyme complex" evidence=IEA] InterPro:IPR015943 Pfam:PF04762
Gene3D:2.130.10.10 InterPro:IPR006849 PANTHER:PTHR12747
GeneTree:ENSGT00390000013344 EMBL:AADN02060093 IPI:IPI00584850
Ensembl:ENSGALT00000003013 OMA:GFKANVE Uniprot:F1P5L4
Length = 492
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 60/219 (27%), Positives = 90/219 (41%)
Query: 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNCMSDL 63
L W PSG IA+ ++ + + +VF E+NGL F + Q V L WN S +
Sbjct: 245 LAWKPSGNLIASTQEKPNRH---DVVFLEKNGLLHGEFTLPFQKGQVKVNELIWNADSTV 301
Query: 64 LAA------VVRFEEYDSVKICFFSNNHWYLKYEIRY--LRRDG-IRFMWHPTKPLQLIC 114
LA V V++ N HWYLK + + L ++ + +W P +L
Sbjct: 302 LAVWLEELKTVNSNPNSYVQLWTTGNYHWYLKQSLHFGNLEKNKLVSLLWDSVLPYRLHI 361
Query: 115 WTLDGQITTYNFIWTT--AVMENS----TALVIDGSKILVTXXXXXXXXXXXXXXXXKFP 168
Y++ WTT + ENS VIDG+K+LVT +
Sbjct: 362 LCQGWHYLFYDWHWTTDRGMGENSLHVANVAVIDGAKVLVTAFQHAVVPPPMCTYELQLK 421
Query: 169 TAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLED 207
AV ++AF++ + AIL V ML+D
Sbjct: 422 QAVNQIAFHTDPKCSGDMAILDADNKIYVYRYGQSMLKD 460
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1102 1027 0.00081 123 3 11 22 0.38 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 632 (67 KB)
Total size of DFA: 493 KB (2229 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 78.86u 0.17s 79.03t Elapsed: 00:00:04
Total cpu time: 78.87u 0.17s 79.04t Elapsed: 00:00:04
Start: Sat May 11 11:13:04 2013 End: Sat May 11 11:13:08 2013