BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001314
(1102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNA4|ELP1_ARATH Elongator complex protein 1 OS=Arabidopsis thaliana GN=ELP1 PE=1 SV=1
Length = 1319
Score = 1395 bits (3610), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/1103 (63%), Positives = 847/1103 (76%), Gaps = 12/1103 (1%)
Query: 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST--VELLKWNCM 60
+LEWMPSGA IAAVY RKS++ PSI F+ERNGLERSSF I E D+T E LKWN
Sbjct: 226 GILEWMPSGAKIAAVYKRKSDDSSPSIAFFERNGLERSSFRIGEPEDATESCENLKWNSA 285
Query: 61 SDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQ 120
SDLLA VV + YD++++ FFSNNHWYLK EIRY R G+ MW PTKPLQLICWTL GQ
Sbjct: 286 SDLLAGVVSCKTYDAIRVWFFSNNHWYLKQEIRYPREAGVTVMWDPTKPLQLICWTLSGQ 345
Query: 121 ITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKS 180
++ +F+W TAVME+STA VID SKILVTPLSLSLMPPPMYLFSL F +AV ++A+YS++
Sbjct: 346 VSVRHFMWVTAVMEDSTAFVIDNSKILVTPLSLSLMPPPMYLFSLSFSSAVRDIAYYSRN 405
Query: 181 SKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLS 240
SKNCLA LSDG L V+ PAP+ EDLEG +F VE +TA GS +HL+WL H LL
Sbjct: 406 SKNCLAVFLSDGNLSFVEFPAPNTWEDLEGKDFSVEISDCKTALGSFVHLLWLDVHSLLC 465
Query: 241 VSHHGPRHSNYFRGATLNEDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVSTQIPLEG 300
VS +G H+ + + L G Y QE+E+ C EDHV +TC+G+ A ++ Q LE
Sbjct: 466 VSAYGSSHNKCLSSGGYDTE-LHGSYLQEVEVVCHEDHVPDQVTCSGFKASITFQTLLES 524
Query: 301 LVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTN 360
V+A+A N +K+ SAF++F GGK+ Y SR + + D FPS+CPW+ V V +
Sbjct: 525 PVLALAWNPSKRDSAFVEFEGGKVLGYASRSEIMETRSSDDSVCFPSTCPWVRVAQVDAS 584
Query: 361 GPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISD 420
G KPL+ GLDD GRL ++GK +CNNCSSFSFYS+ A + ++HLI+ TKQ+ LFIVD D
Sbjct: 585 GVHKPLICGLDDMGRLSINGKNLCNNCSSFSFYSELANEVVTHLIILTKQDFLFIVDTKD 644
Query: 421 ILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECM 480
+L+G++AL F G RR EEN+SY+NIWERGAKVIGVL+GDEAAVILQT RGNLEC+
Sbjct: 645 VLNGDVALGNVFFVIDGRRRDEENMSYVNIWERGAKVIGVLNGDEAAVILQTMRGNLECI 704
Query: 481 YPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLS 540
YPRKLVL+SI NAL Q RF+DA +VRRHRI+FNVIVD GWQAFLQSA FV QVNNL+
Sbjct: 705 YPRKLVLSSITNALAQQRFKDAFNLVRRHRIDFNVIVDLYGWQAFLQSAVAFVEQVNNLN 764
Query: 541 YITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKAL 600
++TEFVCA+ NE++TETLYKKF F S E F+ K S NKVSSVL AIRKAL
Sbjct: 765 HVTEFVCAMKNEDVTETLYKKFSF-SKKGDEVFR------VKDSCSNKVSSVLQAIRKAL 817
Query: 601 EEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGS-DEPRRMSYPSAEEAL 659
EE +PESPSRELCILTTLARSDPPA+EE+L RIK +RE ELL S D+ R+ S PSAEEAL
Sbjct: 818 EEHIPESPSRELCILTTLARSDPPAIEESLLRIKSVREMELLNSSDDIRKKSCPSAEEAL 877
Query: 660 KHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDL 719
KHLLWL DSEAV+EAALGLYDLNLAAIVALNSQRDPKEFLPYLQELE MP LM + ID+
Sbjct: 878 KHLLWLLDSEAVFEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELEKMPESLMHFKIDI 937
Query: 720 RLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSD 779
+LQRF++AL++IVS G Y DC+NL+KK QLFPLGL LITDP K VLEAWADHL D
Sbjct: 938 KLQRFDSALRNIVSAGVGYFPDCMNLIKKNPQLFPLGLLLITDPEKKLVVLEAWADHLID 997
Query: 780 VKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQA 839
K FEDAATTY CC LEKA KAYR G+WSGVL V L+KLGKDE+ KLA ELCEE+ A
Sbjct: 998 EKRFEDAATTYLCCCKLEKASKAYRECGDWSGVLRVGALMKLGKDEILKLAYELCEEVNA 1057
Query: 840 LGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASS 899
LGKP EAAKIAL+YC D++ GISLLI+AR+WEEALRVAF+H +D I+ VK ++LECAS
Sbjct: 1058 LGKPAEAAKIALEYCSDISGGISLLINAREWEEALRVAFLHTADDRISVVKSSALECASG 1117
Query: 900 LIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDLDDDTVSETSSTFSGMSV 959
L+ E+KE +EKVGKYLTRYLAVRQRRLLL AKL+SE+RS+ DLDDDT SE SS SGMS
Sbjct: 1118 LVSEFKESIEKVGKYLTRYLAVRQRRLLLAAKLKSEERSVVDLDDDTASEASSNLSGMSA 1177
Query: 960 YTTGSSTRKSSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGAK 1019
YT G+ R S+A+ S A S+AR+ +RQR GKIR GS GEEMALVDHLKGM +T G K
Sbjct: 1178 YTLGTR-RGSAASVSSSNATSRARDLRRQRKSGKIRAGSAGEEMALVDHLKGMRMTDGGK 1236
Query: 1020 QELKSLVVFLVMLGEVDTARKLQDTGETFQLSQMAAIKLAEDTMSIDIINEHAHNMERYV 1079
+ELKSL++ LV LGE+++A+KLQ T E FQ+SQ+AA++LA DT+S + ++E + ERY
Sbjct: 1237 RELKSLLICLVTLGEMESAQKLQQTAENFQVSQVAAVELAHDTVSSESVDEEVYCFERYA 1296
Query: 1080 QIVKLESQNSEAFSWRSKVFLSP 1102
Q + +++S+AFSW KVF+SP
Sbjct: 1297 QKTRSTARDSDAFSWMLKVFISP 1319
>sp|O95163|ELP1_HUMAN Elongator complex protein 1 OS=Homo sapiens GN=IKBKAP PE=1 SV=3
Length = 1332
Score = 334 bits (856), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 301/1045 (28%), Positives = 480/1045 (45%), Gaps = 118/1045 (11%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ D+ ++ IVF+E+NGL F + D V L WN
Sbjct: 240 LGPALAWKPSGSLIASTQDKPNQQ---DIVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNA 296
Query: 60 MSDLLAAVV---RFEEYDSVKICF----FSNNHWYLKYEIRYL---RRDGIRFMWHPTKP 109
S +LA + + EE K C N HWYLK + + + + MW P P
Sbjct: 297 DSSVLAVWLEDLQREESSIPKTCVQLWTVGNYHWYLKQSLSFSTCGKSKIVSLMWDPVTP 356
Query: 110 LQLICWTLDGQITTYNFIWTT--AVMENSTAL----VIDGSKILVTPLSLSLMPPPMYLF 163
+L Y++ WTT +V +NS+ L VIDG+++LVT +++PPPM +
Sbjct: 357 YRLHVLCQGWHYLAYDWHWTTDRSVGDNSSDLSNVAVIDGNRVLVTVFRQTVVPPPMCTY 416
Query: 164 SLKFPTAVTEMAFYSKSSK-NCLAAILSDGCLCVV---DLPAPDMLEDLEGTEFVVEACI 219
L FP V ++ F + K N LA + + + V D P+ D +
Sbjct: 417 QLLFPHPVNQVTFLAHPQKSNDLAVLDASNQISVYKCGDCPSAD-------------PTV 463
Query: 220 SETAFGSVIHLIWLGSHLLLSVSHHGPRHSNYFRGATLNED--------GLLGFYAQEIE 271
A G G + L H R+ F NED GLL + +++
Sbjct: 464 KLGAVGGS------GFKVCLRTPHLEKRYKIQFEN---NEDQDVNPLKLGLLTWIEEDVF 514
Query: 272 LACSEDH-----VQGLLTCAG-------WHAKVSTQIPLEGLVIAIAPNNAKKYSAFLQF 319
LA S V LT A VS+ ++G++I++ N+ K S LQ
Sbjct: 515 LAVSHSEFSPRSVIHHLTAASSEMDEEHGQLNVSSSAAVDGVIISLCCNSKTK-SVVLQL 573
Query: 320 HGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVS 379
G+I +Y+ + FP P+ + + + GL D R ++
Sbjct: 574 ADGQIFKYLWESPSLAIKPWKNSGGFPVRFPYPCTQTELAMIGEEECVLGLTDRCRFFIN 633
Query: 380 GKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGEL--ALKYENFTHVG 437
V +N +SF+ Y + L+L T + + D L L + +H
Sbjct: 634 DIEVASNITSFAVYDE-------FLLLTTHSHTCQCFCLRDASFKTLQAGLSSNHVSHGE 686
Query: 438 NRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQG 497
RK E RG++++ V+ D ++LQ RGNLE ++ R LVL I L +
Sbjct: 687 VLRKVE---------RGSRIVTVVPQD-TKLVLQMPRGNLEVVHHRALVLAQIRKWLDKL 736
Query: 498 RFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENITET 557
F++A +R+ RIN N+I DH + FL + F++Q++++++I F + E++T+T
Sbjct: 737 MFKEAFECMRKLRINLNLIYDH-NPKVFLGNVETFIKQIDSVNHINLFFTELKEEDVTKT 795
Query: 558 LYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPSRELCILTT 617
+Y P ++D + NK+ V A+R +E P L ILT+
Sbjct: 796 MY--------PAPVTSSVYLSRD---PDGNKIDLVCDAMRAVMESINPHKYC--LSILTS 842
Query: 618 LARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALG 677
+ P LE L+++ EL G + P SAEEALK+LL L D +Y+ +LG
Sbjct: 843 HVKKTTPELEIVLQKVH-----ELQG-NAPSDPDAVSAEEALKYLLHLVDVNELYDHSLG 896
Query: 678 LYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDS 737
YD +L +VA SQ+DPKE+LP+L L+ M R+TID L+R+E A+ H+ G
Sbjct: 897 TYDFDLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPE 956
Query: 738 YHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLE-AWADHLSDVKCFEDAATTYFCCSSL 796
Y +CLNL+K L+ LKL + ++ Q + A+ +HL +E A + C +
Sbjct: 957 YFPECLNLIKD-KNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAH 1015
Query: 797 EKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGD 856
EKA+ A+ GNW L VA L KD++ L + L +L K +AA + + D
Sbjct: 1016 EKALSAFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHIDAAMVLEECAQD 1075
Query: 857 VTNGISLLIDARDWEEALRVAFMHRREDLI-TKVKHASLECASSLIGEYKEGLEKVGKYL 915
+ LL++ WEEALR+ + + R D+I T VK + LE + Y L+
Sbjct: 1076 YEEAVLLLLEGAAWEEALRLVYKYNRLDIIETNVKPSILEAQKN----YMAFLDSQTATF 1131
Query: 916 TRYLAVRQRRLLLVAKLQSEDRSMNDLDDDTVSETSSTFSGMSVYTTGSS-TRKSSAASI 974
+R+ ++RLL+V +L+ + + D+ + S FS S +GS + K S ++
Sbjct: 1132 SRH----KKRLLVVRELKEQAQQAGLDDEVPHGQESDLFSETSSVVSGSEMSGKYSHSNS 1187
Query: 975 KSTAASKARESKRQRNRGKIRPGSP 999
+ +A S K +R + ++ GSP
Sbjct: 1188 RISARSSKNRRKAERKKHSLKEGSP 1212
>sp|Q8WND5|ELP1_RABIT Elongator complex protein 1 OS=Oryctolagus cuniculus GN=IKBKAP PE=2
SV=1
Length = 1333
Score = 324 bits (830), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 316/1104 (28%), Positives = 512/1104 (46%), Gaps = 131/1104 (11%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ ++ ++ +VF+E+NGL F + D V L WN
Sbjct: 240 LGPALAWKPSGSLIASTQNKPNQQ---DVVFFEKNGLLHGQFTLPFLKDEVKVNDLLWNA 296
Query: 60 MSDLLAAVVR--FEEYDSV-----KICFFSNNHWYLKYEI---RYLRRDGIRFMWHPTKP 109
S +LA + E DSV ++ N HWYL + Y + + MW P P
Sbjct: 297 DSSVLAVWLEDLQREEDSVLKTYVQLWTVGNYHWYLNECLPFSTYGKSKIVSLMWDPVIP 356
Query: 110 LQLICWTLDGQITTYNFIWTT--AVMENSTAL----VIDGSKILVTPLSLSLMPPPMYLF 163
+L Y++ WTT + +N + L VIDG++ILVT +++PPPM +
Sbjct: 357 YRLHVLCQGWHYLCYDWRWTTDRSSGDNESDLANVAVIDGNRILVTVFQQTVVPPPMCTY 416
Query: 164 SLKFPTAVTEMAFYSKSSK-NCLAAILSDGCLCVV---DLPAPD---MLEDLEGTEFVVE 216
L P V ++ F + K N LA + + + V D P+ D L + G F V
Sbjct: 417 RLLLPHPVNQVTFCALPKKSNDLAVLDASNQISVYKCGDSPSMDPTVKLGAVGGNGFKVS 476
Query: 217 ACI----------------SETAFGSVIHLIWLGSHLLLSVSHH--GPRHSNYFRGATLN 258
ET + L W+ + L++ H P+ S R +
Sbjct: 477 LRTPHLEKRYKIQFESNEDQETNPLKLSLLSWIEEDIFLAICHSQCSPQQSVIHRLTVV- 535
Query: 259 EDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVSTQIPLEGLVIAIAPNNAKKYSAFLQ 318
C D QG L+ VS+ I ++G++I++ N+K S LQ
Sbjct: 536 --------------PCEVDEEQGQLS-------VSSSISVDGIIISMC-CNSKTKSVALQ 573
Query: 319 FHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHV 378
G+I +Y+ + FP P+ + + + + GL D R +
Sbjct: 574 LADGQILKYIWESPSLAVEPWKNPGGFPIQFPYPCIQTELAMIGGEECVLGLTDRCRFFI 633
Query: 379 SGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELALKYENFTHVGN 438
+ V +N +SF+ Y + L+L T + + D L + +HV N
Sbjct: 634 NDTEVASNITSFAVYDE-------FLLLTTHSHTCQCYCLKDASIKTLQAGLSS-SHVSN 685
Query: 439 RRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGR 498
+ ERG++++ V+ D +ILQ RGNLE ++ R LVL I L +
Sbjct: 686 GEILRKV------ERGSRIVTVVPQD-TKLILQMPRGNLEVVHHRALVLAQIRKWLDKIM 738
Query: 499 FRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENITETL 558
F++A +R+ RIN N+I DH + FLQ+ F+RQ++ +++I F + E++T+T+
Sbjct: 739 FKEAFECMRKLRINLNLIHDH-NPEVFLQNVETFIRQIDCVNHINLFFTELKEEDVTKTM 797
Query: 559 YKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPSRELCILTTL 618
Y +P + P K+ + A+R A+E P L ILT+
Sbjct: 798 YPP----PVPSSVQQSRDPGG-------TKLDLICDALRVAMENINPHKYC--LPILTSH 844
Query: 619 ARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGL 678
+ P LE L+++ EL G + P SAEEALK+LL L D +Y+ +LG
Sbjct: 845 VKKTTPELEIVLQKVH-----ELQG-NAPSDPDAVSAEEALKYLLLLVDVNELYDHSLGT 898
Query: 679 YDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSY 738
YD +L +VA SQ+DPKE+LP+L L+ M R+TID L+R+E A+ H+ G Y
Sbjct: 899 YDFDLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEY 958
Query: 739 HADCLNLMKKYAQLFPLGLKLITDPAK-MEQVLEAWADHLSDVKCFEDAATTYFCCSSLE 797
++CLNL+K L+ LKL ++ + + A+ +HL + +E A + C + E
Sbjct: 959 FSECLNLIKD-KNLYNEALKLYPPTSQEYKDISIAYGEHLMEEHQYEPAGLVFARCGAHE 1017
Query: 798 KAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDV 857
KA+ A+ G+W L +A L + ++++A L + L +L K +AA + Y D
Sbjct: 1018 KALSAFLTCGSWQQTLCMAAQLNMTEEQLAGLGRTLAGKLAEQRKHSDAAIVLEQYTQDY 1077
Query: 858 TNGISLLIDARDWEEALRVAFMHRREDLI-TKVKHASLECASSLIGEYKEGLEKVGKYLT 916
+ LL++ WEEALR+ + + R D+I T +K + LE + Y LE +
Sbjct: 1078 EEAVLLLLEGAAWEEALRLVYKYNRLDIIETNIKPSILEAYKN----YMAFLESQSATFS 1133
Query: 917 RYLAVRQRRLLLVAKLQSEDRSMNDLDD--------DTVSETSSTFSGMSVYTTGSSTRK 968
R+ + RLL V +L+ + + DLDD D SETSS SG + S++
Sbjct: 1134 RH----KERLLEVRELKERAQQV-DLDDEMPHGQEADLFSETSSIVSGSEM-----SSKY 1183
Query: 969 SSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGA-KQELKSLVV 1027
S + S S +SK R K +R + ++ GSP E++AL++ L + ++ K E+ ++
Sbjct: 1184 SHSNSRISARSSKNRR-KAERKKHSLKEGSPLEDLALLEALNEVVQSLDKLKDEVYRILK 1242
Query: 1028 FLVMLGEVDTARKLQDT-GETFQL 1050
L + + R+LQ T +T QL
Sbjct: 1243 VLFLFEFDEQGRELQKTFQDTLQL 1266
>sp|Q2TAQ1|ELP1_XENLA Putative elongator complex protein 1 OS=Xenopus laevis GN=ikbkap PE=2
SV=1
Length = 1170
Score = 319 bits (818), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 285/1025 (27%), Positives = 472/1025 (46%), Gaps = 100/1025 (9%)
Query: 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDI---NEQIDSTVELLKWNCMS 61
L W PSGA IA+ + +++ S++F+E+NGL F + QI V+ L WN S
Sbjct: 95 LSWKPSGALIASSQSKPNKH---SVIFFEKNGLVHGEFTLPFTKGQI--KVKELLWNSDS 149
Query: 62 DLLAAVVRFEEYDS------VKICFFSNNHWYLKYEIRYLRRDGIR---FMWHPTKPLQL 112
+LA + E D V++ N HWYLK + + + + MW P +L
Sbjct: 150 TILAIWLEDNEKDESSSGCCVQLWTVGNYHWYLKQSLNFGTDEMKKIECLMWDPENAYRL 209
Query: 113 ICWTLDGQITTYNFIWTTAVMENSTA--LVIDGSKILVTPLSLSLMPPPMYLFSLKFPTA 170
++ +++ W T + VIDG K+LVT +++PPPM + ++ A
Sbjct: 210 HVFSTGWHYFCFDWFWGTDHSDGGQGDVAVIDGDKVLVTSFQQAVVPPPMSTYFIQLSCA 269
Query: 171 VTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHL 230
V E+ F + KN AIL + + + D V +S F +
Sbjct: 270 VNEVTFQLEPKKNSGIAILDSTNILSIYRYGNSTVND----PTVKLGAVSGNGFRTSSQT 325
Query: 231 IWLGSHLLLSVSHHGPRHS-----NYFRGATLNEDGLLGFYAQEIELACSEDHVQGLLTC 285
L L L PR++ FR T +D +QE + S H
Sbjct: 326 PKLEKKLRL------PRNACDVQLRSFRLLTWVQDDTFLAVSQESNSSISTVHHMNTDQM 379
Query: 286 AGWHAKVSTQIPLEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHD---- 341
G V + G +I++ + K+ A LQ GKI +Y+ D
Sbjct: 380 DGQDINVRDVGTITGHIISLCYSPNTKHCA-LQTSNGKIWKYLCEYPTPAVEPWIDSMGQ 438
Query: 342 DASFPSSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAM 401
+ FP C + S+ + ++ GL + RL ++ V +N +SF Y +
Sbjct: 439 EVKFPQPCVQTALASIEG----EDMVIGLTERSRLFINNSEVASNITSFHLYEE------ 488
Query: 402 SHLILATKQNLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVL 461
L+L T + V + D L + N N I ERG+++I V+
Sbjct: 489 -FLLLTTHSHTCRCVSLRDTSLKALETQL-------NSASNPNDETIRKVERGSRIITVV 540
Query: 462 HGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCG 521
D +ILQ RGNLE ++ R LVL I L + F++A +R+ RIN N++ DH
Sbjct: 541 PCD-TKLILQMPRGNLETIHHRALVLAQIRKWLDRLLFKEAFECMRKLRINLNLLYDHNP 599
Query: 522 WQAFLQSASEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDF 581
+AFL + F++Q+ +++YI F+ I E++T+T+Y ++ E
Sbjct: 600 -KAFLDNVDLFIKQIGSVNYINLFLTEIKEEDVTKTMYPTHALSTMQSSE---------- 648
Query: 582 KASECNKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETEL 641
++ KV V A+R A+E+ P+ L ILT+ R P LE AL+++ +RE+
Sbjct: 649 -GAKAKKVDIVCDAVRAAMEKWDPQKFC--LSILTSYVRRTIPQLEIALQKVHELRESP- 704
Query: 642 LGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPY 701
+ SA+EALK+LL+L D +Y+ +LG YD +L +VA SQ+DPKE+LP+
Sbjct: 705 -------STTIVSADEALKYLLFLVDVNELYDHSLGTYDFDLVVMVAEKSQKDPKEYLPF 757
Query: 702 LQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYA------QLFPL 755
L +L+ M RYTID L+R++ AL ++ G Y + L+ +K + +L+P
Sbjct: 758 LNKLKKMETNYQRYTIDKHLKRYKKALSNLSKCGPDYFTEFLSFVKDQSLYTEALELYPH 817
Query: 756 GLKLITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTV 815
G + + + A+ DHL + +E A Y C+S+EKA+ A+ ASGNW V+ +
Sbjct: 818 G------TVEYKAINAAYGDHLVSKQQYELAGLIYARCNSIEKALDAFIASGNWHQVMCM 871
Query: 816 AGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALR 875
A L+ +++A LA+ + +L K +AA + Y D I LL++ WEEALR
Sbjct: 872 ASQLEYSGEKIAALARTVAGKLVEQRKQADAAVLLEQYAEDYEEAILLLLEGAHWEEALR 931
Query: 876 VAFMHRREDLI-TKVKHASLECASSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQS 934
+ + + R D++ T +K A L+ + + + ++ R VR+ + L
Sbjct: 932 LIYKYIRLDILETNLKPALLDAQRNHMILFDNQKTTFTRHKERLSVVREMKEKARLGLLD 991
Query: 935 EDRSMNDLDDDTVSETSSTFSGMSVYTTGSSTRKSSAASIKSTAASKARESKRQRNRGKI 994
ED + + D S+TS S+ T ++ K S ++ + ++ S K +R + +
Sbjct: 992 EDVT-GCAEADLFSDTS------SIMTASDASGKYSQSNSRISSRSSKNRRKAERKKHSL 1044
Query: 995 RPGSP 999
+ GSP
Sbjct: 1045 KEGSP 1049
>sp|Q7TT37|ELP1_MOUSE Elongator complex protein 1 OS=Mus musculus GN=Ikbkap PE=2 SV=2
Length = 1333
Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 309/1111 (27%), Positives = 504/1111 (45%), Gaps = 137/1111 (12%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ D+ ++ +VF+E+NGL F + D V L WN
Sbjct: 240 LGPALAWKPSGSLIASTQDKPNQQ---DVVFFEKNGLLHGHFTLPFLKDEVKVNDLLWNA 296
Query: 60 MSDLLAAVVR-FEEYDS------VKICFFSNNHWYLKYEIRYL---RRDGIRFMWHPTKP 109
S +LA + + DS V++ N HWYLK + + + + +W P P
Sbjct: 297 DSSVLAIWLEDLPKEDSSTLKSYVQLWTVGNYHWYLKQSLPFSTTGKNQIVSLLWDPVTP 356
Query: 110 LQLICWTLDGQITTYNFIWTTAVMENSTA------LVIDGSKILVTPLSLSLMPPPMYLF 163
+L + ++ WTT ++A VIDG+++LVT +++PPPM +
Sbjct: 357 CRLHVLCTGWRYLCCDWHWTTDRSSGNSANDLANVAVIDGNRVLVTVFRQTVVPPPMCTY 416
Query: 164 SLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETA 223
L P V ++ F + + L V+D + V C +
Sbjct: 417 RLLIPHPVNQVIFSAHLGND----------LAVLD----------ASNQISVYKCGDKPN 456
Query: 224 FGSVIHLIWLGSH---LLLSVSHHGPRHSNYFRGAT-----------------LNEDGLL 263
S + L +G + + L+ H R+S F + +D L
Sbjct: 457 MDSTVKLGAVGGNGFKVPLTTPHLEKRYSIQFGNNEEEEEEEVNALQLSFLTWVEDDTFL 516
Query: 264 GFYAQE---------IELACSE-DHVQGLLTCAGWHAKVSTQIPLEGLVIAIAPNNAKKY 313
+ + SE D QG L VS+ + ++G+VI + +K
Sbjct: 517 AISYSHSSSQSIIHHLTVTHSEVDEEQGQL-------DVSSSVTVDGVVIGLC-CCSKTK 568
Query: 314 SAFLQFHGGKISEYMSRVGLTGGALTHDDASFP----SSCPWMNVVSVGTNGPLKPLLFG 369
S +Q G++ +Y+ + P C M V ++G + + G
Sbjct: 569 SLAVQLADGQVLKYLWESPSLAVEPWKNSEGIPVRFVHPCTQMEVATIGG----EECVLG 624
Query: 370 LDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELALK 429
L D R ++ V +N +SF+ L++ T + + +S +LK
Sbjct: 625 LTDRCRFFINDTEVASNITSFAVCD-------DFLLVTTHSHTCQVFSLSGA-----SLK 672
Query: 430 YENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTS 489
G+ I + ERG++++ V+ D +ILQ RGNLE ++ R LVL
Sbjct: 673 MLQAALSGSHEASGEI--LRKVERGSRIVTVVPQD-TKLILQMPRGNLEVVHHRALVLAQ 729
Query: 490 IVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAI 549
I L + F++A +R+ RIN N+I DH + FL++ FV+Q++++++I F +
Sbjct: 730 IRKWLDKLMFKEAFECMRKLRINLNLIHDH-NPKVFLENVETFVKQIDSVNHINLFFTEL 788
Query: 550 NNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPS 609
E++T+T+Y P + + D K K+ + A+R A+E P
Sbjct: 789 REEDVTKTMYPP------PITKSVQVSTHPDGK-----KLDLICDAMRAAMEAINP---- 833
Query: 610 RELC--ILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLAD 667
R+ C ILT+ + P LE L++++ EL G + P S EEALK+LL L D
Sbjct: 834 RKFCLSILTSHVKKTTPELEIVLQKVQ-----ELQG-NLPFDPESVSVEEALKYLLLLVD 887
Query: 668 SEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENA 727
++ +LG YD NL +VA SQ+DPKE+LP+L L+ M R+TID L+R+E A
Sbjct: 888 VNELFNHSLGTYDFNLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKA 947
Query: 728 LKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI-TDPAKMEQVLEAWADHLSDVKCFEDA 786
L H+ G Y +CLNL+K L+ LKL D + + V A+ +HL +E A
Sbjct: 948 LGHLSKCGPEYFTECLNLIKD-KNLYKEALKLYRPDSPQYQAVSMAYGEHLMQEHLYEPA 1006
Query: 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEA 846
+ C + EKA++A+ A G+W L VA L++ KD+VA LA+ L +L K EA
Sbjct: 1007 GLVFARCGAQEKALEAFLACGSWQQALCVAAQLQMSKDKVAGLARTLAGKLVEQRKHSEA 1066
Query: 847 AKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLI-TKVKHASLECASSLIGEYK 905
A + Y D + LL++ WEEALR+ + + R D+I T VK + LE + +
Sbjct: 1067 ATVLEQYAQDYEEAVLLLLEGSAWEEALRLVYKYDRVDIIETSVKPSILEAQKNYMDFLD 1126
Query: 906 EGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDLDDDTVSETSSTFSGMSVYTTGSS 965
++ R VR R ++ + + + D SETSS SG + S
Sbjct: 1127 SETATFIRHKNRLQVVRALR-RQAPQVHVDHEVAHGPESDLFSETSSIMSGSEM-----S 1180
Query: 966 TRKSSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGA-KQELKS 1024
R S + S S +SK R K +R + ++ GSP E +AL++ L + +V K E+++
Sbjct: 1181 GRYSHSNSRISARSSKNRR-KAERKKHSLKEGSPLEGLALLEALSEVVQSVEKLKDEVRA 1239
Query: 1025 LVVFLVMLGEVDTARKLQDTGE-TFQLSQMA 1054
++ L + + A++LQ E T QL + A
Sbjct: 1240 ILKVLFLFEFEEQAKELQRAFESTLQLMERA 1270
>sp|Q8VHU4|ELP1_RAT Elongator complex protein 1 OS=Rattus norvegicus GN=Ikbkap PE=2 SV=1
Length = 1331
Score = 306 bits (785), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 318/1114 (28%), Positives = 509/1114 (45%), Gaps = 153/1114 (13%)
Query: 1 MGAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDST-VELLKWNC 59
+G L W PSG+ IA+ D+ ++ +VF+E+NGL F + D V L WN
Sbjct: 240 LGPSLAWKPSGSLIASTQDKPNQQ---DVVFFEKNGLLHGYFTLPFLKDEVKVNDLLWNA 296
Query: 60 MSDLLAAVVRFEEYDS---------VKICFFSNNHWYLKYEIRYL---RRDGIRFMWHPT 107
S +LA V E+ V++ N HWYLK + + + + +W P
Sbjct: 297 DSSVLA--VWLEDLPKEGSSTLKSYVQLWTVGNYHWYLKQSLPFSTTGKNQIVSLLWDPV 354
Query: 108 KPLQLICWTLDGQITTYNFIWTTAVMENSTA------LVIDGSKILVTPLSLSLMPPPMY 161
P +L + ++ WTT ++A VIDG+K+LVT ++ PPPM
Sbjct: 355 TPGRLHVLCQGWRYLCCDWHWTTDRSSGNSADDLANVAVIDGNKVLVTVFQRTVTPPPMC 414
Query: 162 LFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP-APDM-----LEDLEGTEFVV 215
+ L P V ++ S N LA + + + V PDM L + GT F V
Sbjct: 415 TYRLLIPHPVNQV-MSSAHLGNDLAVLDASNQISVYKCDDKPDMDSTVKLGAVGGTGFKV 473
Query: 216 --------------------EACISETAFGSVIHLIWLGSHLLLSVSH-HGPRHSNYFRG 254
E +S F L W+ L++SH H S
Sbjct: 474 PLRTPHLEKRYRIQFGNKEEEEDVSPLQFR---FLTWIEGDAFLAISHSHSSPQS----- 525
Query: 255 ATLNEDGLLGFYAQEIELACSE-DHVQGLLTCAGWHAKVSTQIPLEGLVIAIAPNNAKKY 313
+ +A SE D QG L VS+ + ++G+VI + + K
Sbjct: 526 -----------IIHHLTMAGSEGDEEQGQLN-------VSSSVTVDGVVIGLCCCSKTKS 567
Query: 314 SAFLQFHGGKISEYMSRVGLTGGALTHDD----ASFPSSCPWMNVVSVGTNGPLKPLLFG 369
SA +Q G++ +Y+ + + F C M ++G + + G
Sbjct: 568 SA-VQLADGQVLKYLWESPSSAVEPWKNSEGRPVRFARPCTQMEAAAIGG----EECVLG 622
Query: 370 LDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELALK 429
L D R ++ V +N +SF+ L++ T + +S +LK
Sbjct: 623 LTDRCRFFINDTEVASNITSFAVCD-------DFLLVTTHSHTCQCFSLSGA-----SLK 670
Query: 430 YENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTS 489
G++ I + ERG++++ V+ D +ILQ RGNLE ++ R LVL
Sbjct: 671 MLQAGLCGSQVPSGEI--LRKVERGSRIVTVVPQD-TKLILQMPRGNLEVVHHRALVLAQ 727
Query: 490 IVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAI 549
I L + F++A +R+ RIN N+I DH + FL++ F++Q+++++++ F +
Sbjct: 728 IRKWLDKLMFKEAFECMRKLRINLNLIHDH-NPKVFLENVETFIKQIDSVNHLNLFFTEL 786
Query: 550 NNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPS 609
E++T+T+Y P + + D K KV + A+R A+E P
Sbjct: 787 KEEDVTKTMYPP------PVTKSVQVSTNPDGK-----KVDLICDAMRVAMETINP---- 831
Query: 610 RELC--ILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLAD 667
R+ C ILT+ + P L+ L+++ EL G P SAEEALK+LL L D
Sbjct: 832 RKFCLSILTSHVKKTTPELDIVLQKVH-----ELQGKI-PFVPESVSAEEALKYLLLLVD 885
Query: 668 SEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENA 727
++ +LG YD +L +VA SQ+DPKE+LP+L L+ M R+TID L+R+E A
Sbjct: 886 VNELFNHSLGTYDFDLVLMVAEKSQKDPKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKA 945
Query: 728 LKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI-TDPAKMEQVLEAWADHLSDVKCFEDA 786
L H+ G Y +CLNL+K L+ LKL D + + V A+ +HL +E A
Sbjct: 946 LGHLSKCGPEYFTECLNLIKD-KNLYKEALKLYRPDSPQYQAVSVAYGEHLVQELLYEPA 1004
Query: 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEA 846
+ C + EKA++A+ A G+W L +A L++ KD+VA LA+ L +L K EA
Sbjct: 1005 GLVFARCGAHEKALEAFLACGSWQQALCMAAQLQMAKDKVAGLARTLAGKLVEQRKHSEA 1064
Query: 847 AKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLI-TKVKHASLECASSLIGEYK 905
A + Y D + LL++ WEEALR+ + + R D+I T VK + LE + Y
Sbjct: 1065 ATVLEQYALDYEEAVLLLLEGSAWEEALRLVYKYDRVDIIETSVKPSILEAQKN----YM 1120
Query: 906 EGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSM-------NDLDDDTVSETSSTFSGMS 958
+ L+ R+ + RL +V +L+S+ + + + D SETSS SG
Sbjct: 1121 DFLDSQTATFIRH----KNRLKVVRELKSQRPRVHVDHEVAHGRETDLFSETSSIRSGSE 1176
Query: 959 VYTTGSSTRKSSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMALVDHLKGMSLTVGA 1018
+ S R S + S S +SK R K +R + ++ GSP E +AL++ L + ++
Sbjct: 1177 M-----SGRYSHSNSRISARSSKNRR-KAERKKHSLKEGSPLEGLALLEALSEVVQSIEK 1230
Query: 1019 -KQELKSLVVFLVMLGEVDTARKLQDTGE-TFQL 1050
K E+ +++ L + + AR+LQ E T QL
Sbjct: 1231 LKDEVHAILKVLFLFEFEEQARELQRAFESTLQL 1264
>sp|Q9VGK7|ELP1_DROME Putative elongator complex protein 1 OS=Drosophila melanogaster
GN=Elp1 PE=1 SV=2
Length = 1252
Score = 246 bits (628), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 279/1054 (26%), Positives = 462/1054 (43%), Gaps = 178/1054 (16%)
Query: 7 WMPSGANIAAVYDRKSENKCPSIVFYERNGLERSS----FDINEQIDSTVELLKWNCMSD 62
W P+G IA ++ NK +I +E+NGL FD+ E+ V L+W+ SD
Sbjct: 240 WRPTGNWIAV--PQQFPNKS-TIALFEKNGLRHRELVLPFDLQEE---PVVQLRWSEDSD 293
Query: 63 LLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICW-TLDGQI 121
+LA +E V + N HWYLK + + + D PL L+ W T G
Sbjct: 294 ILAIRTCAKEEQRVYLYTIGNYHWYLKQVLIFEQAD----------PLALLHWDTRCGAE 343
Query: 122 TTYNFI----------WTTAVMENSTAL-VIDGSKILVTPLSLSLMPPPMYLFSLKFPTA 170
T + + W AV N++ + VIDG ++L+T +++PPPM LKF T
Sbjct: 344 HTLHVLKESGKHLVYRWAFAVDRNNSIVGVIDGKRLLLTDFDEAIVPPPMSKIVLKFETY 403
Query: 171 VTEMAFYSKSSK----NCLAAILSDGCLCVV--DLPAPDMLEDLEGTEFVVEACISETAF 224
+ AF S + C I + + + +L P ML + +A +S
Sbjct: 404 IN--AFISHGTSLWVYTCDRKIYLNEHIHTLGKELQKPIML--------MPDAELSGLHL 453
Query: 225 GSVIHLIWLGSHLLLSVSHHGPRHSNYFRGATLNEDGLLGFYAQEIELACSEDHVQGLLT 284
++ H H LL+ +H + + + D G
Sbjct: 454 ANLTHF---SPHYLLA-THSSAGSTRLLLLSYKDNDNKPG-------------------- 489
Query: 285 CAGWHAKVSTQIPLEGLV--IAIAP-----------NNAKKYSAFLQFHGGKISEYMSRV 331
W +V + + + GLV +A+AP NN Y L+ E S V
Sbjct: 490 --EWFYRVHSSVRINGLVNAVAVAPYAMNEFYVQTVNNGHTYEVSLKADKTLKVE-RSYV 546
Query: 332 GLTGGALTHDDASFPSSCPWMNVVSVGTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFS 391
L A D C W G G L L + LH+ G + + +SF
Sbjct: 547 QLHEPA-DQIDWVIVKGCIWD-----GYTGAL----VTLRNQHLLHIDGYRIGEDVTSFC 596
Query: 392 FYSKSAGQAMSHLILATKQNLLFIVDISDILHGELALKYENFTHVGNRRKEENISYINIW 451
+++ ++ T+ N + V + D RR+ ++ NI
Sbjct: 597 --------VVTNYLVYTQLNAMHFVQLDD------------------RRQ---VASRNI- 626
Query: 452 ERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRI 511
ERGAK++ + +A V+LQ RGNLE + PR LVL + + L +G+++ A+ M R+ RI
Sbjct: 627 ERGAKIVTAV-ARKARVVLQLPRGNLEAICPRVLVLELVGDLLERGKYQKAIEMSRKQRI 685
Query: 512 NFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAINNENITETLYKKFQFLSLPCRE 571
N N+I DH + F+ S F+ +N ++ F+ + NE+ T+ +Y +
Sbjct: 686 NLNIIFDH-DVKRFVSSVGAFLNDINEPQWLCLFLSELQNEDFTKGMYSS-------NYD 737
Query: 572 EFKDLPAKDFKASECNKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALE 631
K D++ + KV V + LE+++ SR L T A LE AL+
Sbjct: 738 ASKQTYPSDYRVDQ--KVEYVC----RLLEQQMNRFVSRFRLPLIT-AYVKLGCLEMALQ 790
Query: 632 RI-KIIRETELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALN 690
I K +E L A++ L+HLL+L D +Y ALG YD L VA
Sbjct: 791 VIWKEQQEDASL------------ADQLLQHLLYLVDVNDLYNVALGTYDFGLVLFVAQK 838
Query: 691 SQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYA 750
SQ+DPKEFLPYL +L+++P ++ ID L+R+ +AL H+ + G+ ++ + L ++K+
Sbjct: 839 SQKDPKEFLPYLNDLKALPIDYRKFRIDDHLKRYTSALSHLAACGEQHYEEALEYIRKHG 898
Query: 751 QLFPLGLKLITDPAKMEQ-VLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNW 809
L+ GL + + ++ + A+ADHL + ++A+ Y L++A+ + + + +W
Sbjct: 899 -LYTDGLAFYREHIEFQKNIYVAYADHLRAIAKLDNASLMYERGGQLQQALLSAKHTLDW 957
Query: 810 SGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARD 869
VL +A L D+V AQ L LQ G+ EA ++ ++C D +L++
Sbjct: 958 QRVLVLAKKLSEPLDQV---AQSLVGPLQQQGRHMEAYELVKEHCQDRKRQFDVLLEGHL 1014
Query: 870 WEEALRVAFMHRREDLITKVKHASLECASSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLV 929
+ A+ A + +D+ K+ A L L + L+ Y R L +R+ +
Sbjct: 1015 YSRAIYEAGL-EDDDVSEKIAPALLAYGVQLESSLQADLQLFLDYKQRLLDIRRNQAKSG 1073
Query: 930 AKLQSEDRSMNDLD--DDTVSETSSTFSGMSVYTTGSSTRKSSAASIKSTAASKARESKR 987
D ++ ++D DT S SS +SG S TG + R +SK R K
Sbjct: 1074 EGYIDTDVNLKEVDLLSDTTSLHSSQYSGTS-RRTGKTFR-----------SSKNRR-KH 1120
Query: 988 QRNRGKIRPGSPGEEMALVDHLKGMSLTVGAKQE 1021
+R ++PG+P E++AL+D L + +Q+
Sbjct: 1121 ERKLFSLKPGNPFEDIALIDALHNHVTKIAQQQQ 1154
>sp|O59704|ELP1_SCHPO Elongator complex protein 1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=iki3 PE=3 SV=1
Length = 1253
Score = 239 bits (611), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 261/1058 (24%), Positives = 462/1058 (43%), Gaps = 129/1058 (12%)
Query: 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSD 62
++L W PSG+ +A + S+N ++F+ERNGL F + + D L WN S
Sbjct: 256 SLLSWKPSGSVLATIKSDSSDNSS-KVIFFERNGLRHGEFSLRRREDEKYTGLAWNVSSS 314
Query: 63 LLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWT---LDG 119
+LA +SV + N HWYLK EI + I WHP L ++
Sbjct: 315 ILAVSTE----NSVMLWTTGNYHWYLKKEINIPQNALIS--WHPEHANTLYITGKNHIEK 368
Query: 120 QITTYNFIWTTAVMENSTAL--VIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFY 177
+ ++ + N L VIDGS +LVTPLSL +PPPM + L V +M
Sbjct: 369 VVFDLKYVTEFSTSPNDFGLIPVIDGSSLLVTPLSLCNIPPPMCRYKLSLDYNV-QMTSI 427
Query: 178 SKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHL 237
+ +S AA D L + + + EF + F S++ L G+ +
Sbjct: 428 NATSDMLFAA--DDRRLTAFTFNSQEDIAKF--GEFDISTYAEGLNFKSLLGLS--GNQV 481
Query: 238 LLSVSHHGPRHSNYFRGATLNEDGLLGFYAQEIELACSEDHVQGLLTCAGWHAKVSTQIP 297
LL G + + F +ED + ++L SE +L A + +++
Sbjct: 482 LLLAD--GTNNCSKFFVFQCDEDN------ESLKLLASESFESCILN-ASYCSEM----- 527
Query: 298 LEGLVIAIAPNNAKKYSAFLQFHGGKISEYMSRVGLTGGALTHDDASFPSSCPWMNVVSV 357
F Q GK+ Y L ++ SFP C + V V
Sbjct: 528 -----------------LFFQTSSGKLISY----NLNVKSIESISLSFPKPCS--DFVVV 564
Query: 358 GTNGPLKPLLFGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVD 417
+ P+ GL GRL+ +++ SF + ++ T +NLL V
Sbjct: 565 PVHETFVPI--GLTSYGRLYAEQRLLSTGVLSFFCTER-------FVLFTTTKNLLKFV- 614
Query: 418 ISDILHGELALKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNL 477
L ++ V + + + + ERG+K++ + + AV+LQ RGNL
Sbjct: 615 -------HLVSTVDDLQVVEDDAVDRHDERCRVVERGSKIVASMPS-KMAVVLQMPRGNL 666
Query: 478 ECMYPRKLVLTSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVN 537
E +YPR +VL + + ++ DA + R HR++ N++ D+ FL++ FV +
Sbjct: 667 ETIYPRIMVLDGVRTYIKALKYGDAFKVCRTHRLDLNILFDY-DPDLFLKNIPVFVDGLY 725
Query: 538 NLSYITEFVCAINNENITETLYKKFQFLSLPCREEFKDLPAKDFKASECNKVSSVLLAIR 597
+ Y+ F+ ++ EN+T +Y + ++ + NKV+ + IR
Sbjct: 726 RVDYLDLFLTSLKPENVTTGMYS-----------DTSKSQSQQSVTTIDNKVNLLCKIIR 774
Query: 598 KALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEE 657
+ L K ++ + I+T+ PP +E AL I + + + + +
Sbjct: 775 EHLTSKYGDTHFQ--AIITSYLCESPPKIEAALGMISGLIKAQ-----------SETVDL 821
Query: 658 ALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTI 717
A++H+ +L D +++ ALGLYDL LA ++A SQ+DP+E++P+L E + L ++ I
Sbjct: 822 AIEHMCFLVDVNMLFDHALGLYDLKLALLIAQQSQKDPREYVPFLHEFQKQESLRRKFNI 881
Query: 718 DLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPAKMEQVLEAWADH 776
D L+R+E AL H+ M +++ D +L+P L+L D ++VL +A +
Sbjct: 882 DCYLKRYERALGHLKEMENAF--DEFKNFTIQHKLYPRALELYKYDKEAQKEVLIIFAQY 939
Query: 777 LSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEE 836
L + +AA Y + +A++AY+++G W L++ +D + + A++L
Sbjct: 940 LRENGKSNEAAIAYESVGKISEAIEAYKSAGMWRECLSILQQTTNSEDLIRETAEDLASL 999
Query: 837 LQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRR----EDLITKVKHA 892
+ +A I L Y + + + + EA+R+A +DL+ V
Sbjct: 1000 CIEKREHCDAGSINLLYLSNPREAVIQMCKGSQYSEAIRIARATGDSSIYKDLLISVLGE 1059
Query: 893 SLECASSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDR------SMNDLDDDT 946
S AS L+ +++ ++ + R+L++ + + ED +M D D
Sbjct: 1060 SFGEASELVADFRNQIKS-----------QTERILVLREKKKEDPISWMEGTMEDQTPDD 1108
Query: 947 VSETSSTFS-GMSVYTTGSSTRKSSAASIKSTAASKARESKRQRNRGKIRPGSPGEEMAL 1005
+S S++ S S+YT T+ S+++ + + R +R+R RGK G+ EE L
Sbjct: 1109 ISLASTSLSTNRSLYT--QYTKSSNSSKMTRNTSKNNRRLERKRARGK--KGTVFEEEYL 1164
Query: 1006 VDHLKGMSLTVGA-KQELKSLVVFLVMLGEVDTARKLQ 1042
V+ L+ + V + E+ L+ LV A +LQ
Sbjct: 1165 VNSLRRLIARVEEIRPEVHRLLEALVRCNMTTQASELQ 1202
>sp|Q06706|ELP1_YEAST Elongator complex protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=IKI3 PE=1 SV=1
Length = 1349
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 152/551 (27%), Positives = 276/551 (50%), Gaps = 54/551 (9%)
Query: 368 FGLDDGGRLHVSGKIVCNNCSSFSFYSKSAGQAMSHLILATKQNLLFIVDISDILHGELA 427
FG+ + G+L + ++ + +S S L+ T Q+ L V ++ L
Sbjct: 645 FGITNNGKLFANQVLLASAVTSLEITD-------SFLLFTTAQHNLQFVHLNSTDFKPLP 697
Query: 428 LKYENFTHVGNRRKEENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVL 487
L E ++E + I ERG+ ++ V+ +++V+LQ RGNLE +YPR +VL
Sbjct: 698 LVEEGV-------EDERVRAI---ERGSILVSVIPS-KSSVVLQATRGNLETIYPRIMVL 746
Query: 488 TSIVNALIQGRFRDALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVC 547
+ ++ R+++A ++ R HRIN +++ D+ + F+++ F+ Q+ + Y+ F+
Sbjct: 747 AEVRKNIMAKRYKEAFIVCRTHRINLDILHDYAP-ELFIENLEVFINQIGRVDYLNLFIS 805
Query: 548 AINNENITETLYKK---------FQFLSLPCREEFKDLPAKDF--KASECNKVSSVLLAI 596
++ +++T+T YK+ F P E + K F K S+ NK+ +L +
Sbjct: 806 CLSEDDVTKTKYKETLYSGISKSFGMEPAPLTEMQIYMKKKMFDPKTSKVNKICDAVLNV 865
Query: 597 RKALEEKVPESPSREL-CILTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSA 655
+ PE + L I+T A +P L AL+ I +EL S+E
Sbjct: 866 LLS----NPEYKKKYLQTIITAYASQNPQNLSAALKLI-----SELENSEE--------K 908
Query: 656 EEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRY 715
+ + +L +L D VY++AL LYD++LA +VA SQ DP+E+LP+LQEL+ PL ++
Sbjct: 909 DSCVTYLCFLQDVNVVYKSALSLYDVSLALLVAQKSQMDPREYLPFLQELQDNEPLRRKF 968
Query: 716 TIDLRLQRFENALKHI--VSMGDSYHADCLNLMKKYAQLFPLGLKLIT-DPAKMEQVLEA 772
ID L +E AL+H+ + + + ++ ++ + L+ GL L D K +
Sbjct: 969 LIDDYLGNYEKALEHLSEIDKDGNVSEEVIDYVESH-DLYKHGLALYRYDSEKQNVIYNI 1027
Query: 773 WADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQE 832
+A HLS + + DAA Y L++AM AY+++ W +++A ++ +EV +A+E
Sbjct: 1028 YAKHLSSNQMYTDAAVAYEMLGKLKEAMGAYQSAKRWREAMSIA--VQKFPEEVESVAEE 1085
Query: 833 LCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHA 892
L L + +AA I L+Y +V ++L A ++ A VA ++++L+ +V
Sbjct: 1086 LISSLTFEHRYVDAADIQLEYLDNVKEAVALYCKAYRYDIASLVAIKAKKDELLEEVVDP 1145
Query: 893 SLECASSLIGE 903
L +I E
Sbjct: 1146 GLGEGFGIIAE 1156
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 30/243 (12%)
Query: 1 MGAVLEWMPSGANIAAVYDRKS---ENKCPSIVFYERNGLERSSFDINEQIDSTVELLKW 57
M L W P G+ IA++ RK+ E ++F+ERNGL FD +D VE + W
Sbjct: 304 MEHQLSWKPQGSLIASI-QRKTDLGEEDSVDVIFFERNGLRHGEFDTRLPLDEKVESVCW 362
Query: 58 NCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTL 117
N S+ LA V+ + +++ N HWYLK E+ D WHP K L+ ++
Sbjct: 363 NSNSEALAVVLA----NRIQLWTSKNYHWYLKQEL--YASDISYVKWHPEKDFTLM-FSD 415
Query: 118 DGQITTYNFIWTTAV------MENSTALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAV 171
G I +F + A +N T+LV+DG + +TPL+L+ +PPPMY + P V
Sbjct: 416 AGFINIVDFAYKMAQGPTLEPFDNGTSLVVDGRTVNITPLALANVPPPMYYRDFETPGNV 475
Query: 172 TEMAFYSKSSKNCLAAILSDGCLCVVDLPA---------PDMLEDLEGTEFVVEA-CISE 221
++A S N + A ++ L +P+ P ++ + +EF E + +
Sbjct: 476 LDVAC---SFSNEIYAAINKDVLIFAAVPSIEEMKKGKHPSIVCEFPKSEFTSEVDSLRQ 532
Query: 222 TAF 224
AF
Sbjct: 533 VAF 535
>sp|B7JJ84|PNP_BACC0 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain AH820) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q81WM8|PNP_BACAN Polyribonucleotide nucleotidyltransferase OS=Bacillus anthracis
GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|C3P5L0|PNP_BACAA Polyribonucleotide nucleotidyltransferase OS=Bacillus anthracis
(strain A0248) GN=pnp PE=3 SV=1
Length = 712
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|C1EP29|PNP_BACC3 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain 03BB102) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B9IV96|PNP_BACCQ Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain Q1) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B7HLE0|PNP_BACC7 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain AH187) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q6HF08|PNP_BACHK Polyribonucleotide nucleotidyltransferase OS=Bacillus thuringiensis
subsp. konkukian (strain 97-27) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q636L9|PNP_BACCZ Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain ZK / E33L) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|A0RHH8|PNP_BACAH Polyribonucleotide nucleotidyltransferase OS=Bacillus thuringiensis
(strain Al Hakam) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|C3L7C0|PNP_BACAC Polyribonucleotide nucleotidyltransferase OS=Bacillus anthracis
(strain CDC 684 / NRRL 3495) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q5DM57|IF172_CHLRE Intraflagellar transport protein 172 OS=Chlamydomonas reinhardtii
GN=IFT172 PE=1 SV=1
Length = 1755
Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 13/170 (7%)
Query: 722 QRFENALKHIVSMGDSYHA-----DCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADH 776
++ + A+ H + G + A DC K G+ + DP + A H
Sbjct: 872 KQMDAAINHFIESGATLKAIKAAIDCRQFAK------AAGIIEVLDPREAMPYFRRIAQH 925
Query: 777 LSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEE 836
E+A Y A++ Y +G W VA L + E+ + E
Sbjct: 926 YETTGALEEAERYYIRADMARDAVEMYSRAGKWEAAQRVARGY-LTESEMRAFYRAKAAE 984
Query: 837 LQALGKPGEAAKIALDYCG-DVTNGISLLIDARDWEEALRVAFMHRREDL 885
+A K EA K L G DV I++ + +++ +R+ +R+E +
Sbjct: 985 FEAAHKLKEAEKAYLAAGGDDVDKAIAMYKRNKMYDQMIRLVTQYRKEKV 1034
>sp|Q732R5|PNP_BACC1 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain ATCC 10987) GN=pnp PE=3 SV=1
Length = 712
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQSVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|A9VT44|PNP_BACWK Polyribonucleotide nucleotidyltransferase OS=Bacillus
weihenstephanensis (strain KBAB4) GN=pnp PE=3 SV=1
Length = 717
Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDMHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
A K+ + D+ + + + D A++V H RED I+ VK +E + +
Sbjct: 230 KTAVKL-YEVDADLNQAVREMAET-DMHSAIQVHEKHAREDAISVVKKRVIEHYEAEEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVSEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B7IUG5|PNP_BACC2 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain G9842) GN=pnp PE=3 SV=1
Length = 712
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + +D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-KDMHSAIQVHEKHAREDAINEVKKRVIEHYEAEEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 -ADTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|B7HDT0|PNP_BACC4 Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain B4264) GN=pnp PE=3 SV=1
Length = 712
Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVK------HASLECA 897
K+ + D+ + + + D A++V H RED I +VK + + E
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-EDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEVD 287
Query: 898 SSLIGEYKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ ++G+ E L K+ K RRL+ V K++ + R +++
Sbjct: 288 ADILGQVNEILYKIVKEEV-------RRLITVEKIRPDGRKGDEI 325
>sp|Q819Z1|PNP_BACCR Polyribonucleotide nucleotidyltransferase OS=Bacillus cereus
(strain ATCC 14579 / DSM 31) GN=pnp PE=3 SV=1
Length = 712
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 3/159 (1%)
Query: 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKP 843
++ + + + + A+ A + T+ + G DE+ +L E +QA+GK
Sbjct: 170 QEQSDIHLVVAGTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKE 229
Query: 844 GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHASLECASSLIGE 903
K+ + D+ + + + D A++V H RED I +VK +E + +
Sbjct: 230 KSEVKL-YEVDADLNQAVREMAE-EDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEAD 287
Query: 904 YKEGLEKVGKYLTRYLAVRQRRLLLVAKLQSEDRSMNDL 942
+ L +V + L + + RRL+ V K++ + R +++
Sbjct: 288 A-DTLGQVNEILYKIVKEEVRRLITVEKIRPDGRKGDEI 325
>sp|Q27YG9|POLR_NORAV Replication polyprotein OS=Nora virus GN=ORF2 PE=4 SV=2
Length = 2104
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 631 ERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLA-DSEAVYEAALGLYDLN-LAAIVA 688
ER+++I T + +P EE + + L +S+ Y + +G +N L ++
Sbjct: 920 ERVRVIAHTAQFPKKSYPQNGFPINEELHREWIQLVINSDYKYHSLIGEEKVNILWNLIR 979
Query: 689 LNSQRDPKEFLPYLQELESMPP 710
L QR+ + F YL++L++ PP
Sbjct: 980 LQPQREVENFKVYLEDLQASPP 1001
>sp|Q6NWV3|IF122_MOUSE Intraflagellar transport protein 122 homolog OS=Mus musculus
GN=Ift122 PE=2 SV=1
Length = 1182
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 4/152 (2%)
Query: 762 DPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKL 821
DP + + ++ AD ++ + A Y KA++ + G ++ +A KL
Sbjct: 684 DPKETKMLITKQADWARNINEPKAAVEMYISAGEHAKAIEISGSHGWVDMLIDIAR--KL 741
Query: 822 GKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHR 881
K E L C + L PG AA+ L GD+ + + L +D + W+EA + H
Sbjct: 742 DKAEREPLLMCACY-FKKLDSPGYAAETYLK-IGDLKSLVQLYVDTKRWDEAFALGEKHP 799
Query: 882 REDLITKVKHASLECASSLIGEYKEGLEKVGK 913
V +A + E ++ K G+
Sbjct: 800 EFKDDVYVPYAQWLAENDRFEEAQKAFHKAGR 831
>sp|Q19345|NHR25_CAEEL Nuclear hormone receptor family member nhr-25 OS=Caenorhabditis
elegans GN=nhr-25 PE=1 SV=1
Length = 572
Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 442 EENISYINIWERGAKVIGVLHGDEAAVILQTNRGNLECMYPRKLVLTSIVNALIQGRFRD 501
EEN+ I IW + ++ L D+ ++LQT+ + + I NA++ G
Sbjct: 357 EENLKDIVIWAKNDQLFSKLSLDDQMILLQTSWTTVH--------IVDITNAMVHGNLLS 408
Query: 502 ALVMVRRHRINFNVIVDHCGWQAFLQSASEFVRQVNNLSYITEFVCAI 549
M + +V G Q F+ S ++ V ++ N+ + CA
Sbjct: 409 QYKMSNGDEVPVG-LVALLGNQTFVSSWNDVVIRLRNMGFTNFDYCAF 455
>sp|A4X4P8|PNP_SALTO Polyribonucleotide nucleotidyltransferase OS=Salinispora tropica
(strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=pnp PE=3
SV=1
Length = 785
Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 815 VAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDAR-DWEEA 873
VA L+ K + +L + E + KP + LDY DV + ++ L AR D EA
Sbjct: 227 VASGLEAAKPAIRELCRAQSELAEVAAKPVAEFPVFLDYSDDVYDAVTEL--AREDVAEA 284
Query: 874 LRVAFMHRREDLITKVKHASLECASSLIGEYKEGLEK 910
L++A RE+ + ++K ++E +G EG EK
Sbjct: 285 LKIAGKADREEALDRIKARAVEE----LGPRFEGREK 317
>sp|P45443|DYHC_NEUCR Dynein heavy chain, cytoplasmic OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ro-1 PE=3 SV=1
Length = 4367
Score = 33.5 bits (75), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 585 ECNKVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKIIRETELLGS 644
E + ++ L I+ ALE++ E SR+ +L LAR++ PA+EEA + I+ L
Sbjct: 3260 EAEQRKNISLEIQAALEKQEAEVASRKKVVLEDLARAE-PAVEEAKASVSSIKRQHLT-- 3316
Query: 645 DEPRRMSYPSA 655
E R M P +
Sbjct: 3317 -EVRSMPTPPS 3326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 390,661,219
Number of Sequences: 539616
Number of extensions: 16106002
Number of successful extensions: 43338
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 43223
Number of HSP's gapped (non-prelim): 105
length of query: 1102
length of database: 191,569,459
effective HSP length: 128
effective length of query: 974
effective length of database: 122,498,611
effective search space: 119313647114
effective search space used: 119313647114
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)