Query 001314
Match_columns 1102
No_of_seqs 263 out of 554
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 21:47:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001314.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001314hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkq_A Coatomer beta'-subunit; 99.8 1E-14 3.5E-19 182.0 50.5 138 721-884 642-779 (814)
2 3mkq_A Coatomer beta'-subunit; 99.4 5.6E-09 1.9E-13 130.1 48.0 149 667-849 654-805 (814)
3 1xi4_A Clathrin heavy chain; a 98.8 6.9E-07 2.4E-11 115.3 26.8 186 694-885 1036-1252(1630)
4 1xi4_A Clathrin heavy chain; a 98.7 2.1E-06 7.3E-11 110.9 26.7 161 713-879 1110-1305(1630)
5 1k8k_C P40, ARP2/3 complex 41 98.5 4E-05 1.4E-09 85.1 30.0 210 4-242 13-262 (372)
6 1gxr_A ESG1, transducin-like e 98.5 0.00011 3.8E-09 79.9 31.1 207 4-241 56-282 (337)
7 3jrp_A Fusion protein of prote 98.4 3.6E-05 1.2E-09 85.4 24.9 219 4-241 16-273 (379)
8 3fm0_A Protein CIAO1; WDR39,SG 98.4 0.00019 6.4E-09 80.5 29.2 220 4-240 66-320 (345)
9 3mkq_B Coatomer subunit alpha; 98.3 6.1E-06 2.1E-10 84.7 15.1 105 774-884 28-132 (177)
10 4g56_B MGC81050 protein; prote 98.3 9.8E-05 3.4E-09 83.5 26.7 189 4-201 47-258 (357)
11 3zwl_B Eukaryotic translation 98.3 0.00082 2.8E-08 73.9 33.5 204 4-242 37-277 (369)
12 1r5m_A SIR4-interacting protei 98.3 0.00033 1.1E-08 78.8 29.5 204 4-239 50-304 (425)
13 2ymu_A WD-40 repeat protein; u 98.3 0.0037 1.3E-07 74.1 40.0 201 4-241 21-238 (577)
14 3fm0_A Protein CIAO1; WDR39,SG 98.3 8.5E-05 2.9E-09 83.3 24.3 186 4-202 110-336 (345)
15 1b89_A Protein (clathrin heavy 98.3 1.7E-06 6E-11 101.1 10.4 191 721-922 74-274 (449)
16 3f3f_A Nucleoporin SEH1; struc 98.3 0.0002 6.7E-09 77.7 25.9 185 4-201 16-249 (351)
17 1gxr_A ESG1, transducin-like e 98.2 0.00026 8.8E-09 77.0 25.7 204 4-241 102-323 (337)
18 1r5m_A SIR4-interacting protei 98.2 0.00037 1.3E-08 78.3 27.1 204 4-242 113-348 (425)
19 3dwl_C Actin-related protein 2 98.2 2.9E-05 1E-09 87.0 17.2 217 4-242 16-269 (377)
20 2ynn_A Coatomer subunit beta'; 98.1 0.00045 1.6E-08 75.8 26.0 207 4-241 18-245 (304)
21 2hes_X YDR267CP; beta-propelle 98.1 0.00018 6E-09 80.2 22.8 158 4-200 63-229 (330)
22 4h5i_A Guanine nucleotide-exch 98.1 0.00013 4.4E-09 82.9 21.8 160 4-201 181-343 (365)
23 3dwl_C Actin-related protein 2 98.1 6.4E-05 2.2E-09 84.2 18.9 182 4-200 60-280 (377)
24 2j04_A TAU60, YPL007P, hypothe 98.1 6.5E-05 2.2E-09 90.6 19.8 181 3-201 19-254 (588)
25 2vdu_B TRNA (guanine-N(7)-)-me 98.1 0.002 6.8E-08 74.7 32.1 182 3-202 8-272 (450)
26 3k26_A Polycomb protein EED; W 98.1 0.00029 9.8E-09 77.6 23.3 216 4-241 74-352 (366)
27 1got_B GT-beta; complex (GTP-b 98.1 0.0026 8.9E-08 70.9 30.4 207 4-242 60-288 (340)
28 3ow8_A WD repeat-containing pr 98.1 0.00052 1.8E-08 76.3 24.3 202 4-241 85-307 (321)
29 3mmy_A MRNA export factor; mRN 98.0 0.00028 9.5E-09 77.7 21.8 181 4-202 44-248 (368)
30 4e54_B DNA damage-binding prot 98.0 0.00026 8.9E-09 81.9 22.2 183 4-203 124-329 (435)
31 3jrp_A Fusion protein of prote 98.0 0.00027 9.3E-09 78.2 21.5 187 4-203 60-289 (379)
32 2pm9_A Protein WEB1, protein t 98.0 0.0011 3.8E-08 74.7 26.9 206 3-241 16-232 (416)
33 4aow_A Guanine nucleotide-bind 98.0 0.0019 6.4E-08 70.5 27.9 208 4-243 43-275 (340)
34 4g56_B MGC81050 protein; prote 98.0 6.2E-05 2.1E-09 85.1 15.8 179 4-202 144-344 (357)
35 3zwl_B Eukaryotic translation 98.0 0.00083 2.8E-08 73.9 24.4 208 4-241 79-332 (369)
36 3ow8_A WD repeat-containing pr 98.0 0.00039 1.3E-08 77.3 21.8 174 4-200 127-320 (321)
37 4h5i_A Guanine nucleotide-exch 98.0 0.00038 1.3E-08 78.9 22.1 190 4-241 138-329 (365)
38 1yfq_A Cell cycle arrest prote 98.0 0.0006 2E-08 74.7 22.8 178 4-202 16-226 (342)
39 2pm9_A Protein WEB1, protein t 98.0 0.00022 7.5E-09 80.5 19.7 213 4-241 72-323 (416)
40 2pm7_B Protein transport prote 98.0 0.00089 3E-08 73.2 23.9 218 4-241 14-271 (297)
41 4gqb_B Methylosome protein 50; 98.0 0.00023 8E-09 80.3 19.6 179 4-202 132-332 (344)
42 3sfz_A APAF-1, apoptotic pepti 98.0 0.012 4.1E-07 77.1 38.5 205 4-241 662-899 (1249)
43 2pbi_B Guanine nucleotide-bind 97.9 0.0015 5E-08 73.6 25.6 209 4-241 69-343 (354)
44 4a11_B DNA excision repair pro 97.9 0.0032 1.1E-07 70.3 28.3 184 4-202 48-277 (408)
45 4gga_A P55CDC, cell division c 97.9 0.0095 3.3E-07 68.2 32.8 178 4-201 110-310 (420)
46 3jro_A Fusion protein of prote 97.9 0.00028 9.4E-09 88.3 21.2 219 4-241 14-271 (753)
47 4ery_A WD repeat-containing pr 97.9 0.00085 2.9E-08 73.2 22.7 177 4-201 28-223 (312)
48 3sfz_A APAF-1, apoptotic pepti 97.9 0.0033 1.1E-07 82.3 32.3 209 4-241 620-857 (1249)
49 2hes_X YDR267CP; beta-propelle 97.9 0.00054 1.8E-08 76.2 21.1 185 4-200 112-327 (330)
50 1erj_A Transcriptional repress 97.9 0.002 6.8E-08 73.4 26.1 181 4-201 128-341 (393)
51 2xzm_R RACK1; ribosome, transl 97.9 0.00089 3.1E-08 74.6 22.7 181 4-200 123-339 (343)
52 3ei3_B DNA damage-binding prot 97.9 0.00049 1.7E-08 77.3 20.8 182 4-202 78-283 (383)
53 1got_B GT-beta; complex (GTP-b 97.9 0.0011 3.9E-08 73.7 23.5 206 4-241 102-329 (340)
54 4aez_A CDC20, WD repeat-contai 97.9 0.0072 2.5E-07 68.7 30.6 200 4-241 98-320 (401)
55 3bg1_A Protein SEC13 homolog; 97.9 0.00097 3.3E-08 73.6 22.6 217 4-241 18-279 (316)
56 2ymu_A WD-40 repeat protein; u 97.9 0.00086 3E-08 79.6 23.6 200 4-241 349-566 (577)
57 1k8k_C P40, ARP2/3 complex 41 97.9 0.00073 2.5E-08 74.8 21.4 180 4-201 57-274 (372)
58 3odt_A Protein DOA1; ubiquitin 97.9 0.0023 7.7E-08 68.8 24.8 201 4-241 23-242 (313)
59 3vl1_A 26S proteasome regulato 97.9 0.00082 2.8E-08 76.2 22.1 216 4-242 144-407 (420)
60 4gqb_B Methylosome protein 50; 97.8 0.0038 1.3E-07 70.3 26.9 189 4-201 35-246 (344)
61 2xzm_R RACK1; ribosome, transl 97.8 0.003 1E-07 70.3 25.5 207 4-243 26-274 (343)
62 3ei3_B DNA damage-binding prot 97.8 0.0017 5.7E-08 73.0 23.6 110 4-126 123-234 (383)
63 2xyi_A Probable histone-bindin 97.8 0.00098 3.4E-08 77.0 22.2 222 4-241 133-396 (430)
64 3vl1_A 26S proteasome regulato 97.8 0.0012 4.3E-08 74.7 22.6 187 4-201 186-419 (420)
65 3iz6_a 40S ribosomal protein R 97.8 0.002 6.9E-08 73.0 24.2 214 4-241 71-361 (380)
66 1pgu_A Actin interacting prote 97.8 0.0033 1.1E-07 74.6 27.1 171 3-202 22-239 (615)
67 1nr0_A Actin interacting prote 97.8 0.00054 1.9E-08 83.2 20.5 184 4-201 64-270 (611)
68 2aq5_A Coronin-1A; WD40 repeat 97.8 0.0011 3.7E-08 75.4 21.6 181 4-201 86-299 (402)
69 1erj_A Transcriptional repress 97.8 0.0026 8.9E-08 72.4 24.6 180 4-201 69-287 (393)
70 2vdu_B TRNA (guanine-N(7)-)-me 97.8 0.00092 3.1E-08 77.5 21.0 111 4-126 107-227 (450)
71 1vyh_C Platelet-activating fac 97.8 0.0083 2.8E-07 68.8 28.8 203 4-240 113-354 (410)
72 3mmy_A MRNA export factor; mRN 97.8 0.001 3.6E-08 73.0 20.1 204 4-241 91-332 (368)
73 3frx_A Guanine nucleotide-bind 97.8 0.0014 4.9E-08 72.4 21.0 178 4-200 112-316 (319)
74 2ynn_A Coatomer subunit beta'; 97.8 0.005 1.7E-07 67.3 25.2 177 4-201 60-259 (304)
75 2xyi_A Probable histone-bindin 97.7 0.00057 1.9E-08 79.0 18.3 187 3-200 185-409 (430)
76 1l0q_A Surface layer protein; 97.7 0.0054 1.8E-07 68.7 25.2 176 4-201 36-233 (391)
77 2pm7_B Protein transport prote 97.7 0.0035 1.2E-07 68.4 22.9 189 4-205 58-289 (297)
78 3frx_A Guanine nucleotide-bind 97.7 0.0056 1.9E-07 67.6 24.6 210 4-241 70-303 (319)
79 1nr0_A Actin interacting prote 97.7 0.0046 1.6E-07 75.0 26.0 204 3-241 22-256 (611)
80 4aez_A CDC20, WD repeat-contai 97.7 0.0031 1.1E-07 71.8 23.1 204 4-241 139-366 (401)
81 1sq9_A Antiviral protein SKI8; 97.7 0.0022 7.5E-08 71.9 21.5 169 4-200 191-394 (397)
82 3odt_A Protein DOA1; ubiquitin 97.7 0.0038 1.3E-07 67.0 22.5 203 4-242 64-284 (313)
83 4ery_A WD repeat-containing pr 97.7 0.0059 2E-07 66.4 24.0 206 4-241 70-296 (312)
84 3dw8_B Serine/threonine-protei 97.7 0.0011 3.6E-08 75.8 18.7 167 4-198 231-443 (447)
85 3dw8_B Serine/threonine-protei 97.7 0.0068 2.3E-07 69.1 25.4 142 50-202 178-374 (447)
86 1sq9_A Antiviral protein SKI8; 97.7 0.0027 9.4E-08 71.1 21.7 183 4-202 67-323 (397)
87 1pgu_A Actin interacting prote 97.7 0.0037 1.3E-07 74.3 23.9 180 4-201 69-283 (615)
88 4aow_A Guanine nucleotide-bind 97.6 0.0032 1.1E-07 68.6 21.6 183 4-200 133-336 (340)
89 3f3f_A Nucleoporin SEH1; struc 97.6 0.0014 4.9E-08 70.7 18.4 186 4-203 115-339 (351)
90 3dm0_A Maltose-binding peripla 97.6 0.0065 2.2E-07 74.7 25.8 205 4-242 387-620 (694)
91 3jro_A Fusion protein of prote 97.6 0.0018 6.1E-08 80.9 21.0 189 4-205 58-289 (753)
92 2j04_A TAU60, YPL007P, hypothe 97.6 0.0012 4.1E-08 79.7 18.4 106 4-123 90-206 (588)
93 3k26_A Polycomb protein EED; W 97.5 0.0028 9.5E-08 69.7 19.3 179 4-200 120-365 (366)
94 1vyh_C Platelet-activating fac 97.5 0.0041 1.4E-07 71.4 21.4 174 4-199 197-409 (410)
95 3i2n_A WD repeat-containing pr 97.5 0.0068 2.3E-07 66.3 22.2 182 5-201 123-353 (357)
96 4ggc_A P55CDC, cell division c 97.5 0.11 3.8E-06 55.6 31.5 180 3-201 29-230 (318)
97 2hqs_A Protein TOLB; TOLB, PAL 97.5 0.017 5.9E-07 66.5 25.4 110 4-124 183-294 (415)
98 3bg1_A Protein SEC13 homolog; 97.5 0.0034 1.2E-07 69.2 18.6 183 4-201 62-293 (316)
99 3i2n_A WD repeat-containing pr 97.5 0.0049 1.7E-07 67.5 19.8 186 4-202 70-292 (357)
100 3dm0_A Maltose-binding peripla 97.4 0.0094 3.2E-07 73.2 24.2 176 4-202 435-633 (694)
101 2xpi_A Anaphase-promoting comp 97.4 0.002 6.8E-08 76.7 17.6 161 716-879 347-541 (597)
102 1ri6_A Putative isomerase YBHE 97.4 0.18 6.1E-06 54.5 31.4 179 9-201 2-209 (343)
103 2oaj_A Protein SNI1; WD40 repe 97.4 0.0055 1.9E-07 78.3 21.7 104 4-125 22-126 (902)
104 3bws_A Protein LP49; two-domai 97.4 0.034 1.2E-06 63.1 26.2 207 4-242 127-362 (433)
105 2y4t_A DNAJ homolog subfamily 97.4 0.0099 3.4E-07 67.7 21.5 138 713-852 148-320 (450)
106 3ieg_A DNAJ homolog subfamily 97.3 0.012 4E-07 64.1 20.9 165 711-877 123-329 (359)
107 3gre_A Serine/threonine-protei 97.3 0.0045 1.5E-07 70.7 18.3 186 4-202 68-293 (437)
108 2aq5_A Coronin-1A; WD40 repeat 97.3 0.0014 4.7E-08 74.5 13.3 158 4-200 181-341 (402)
109 3mkq_B Coatomer subunit alpha; 97.3 0.0036 1.2E-07 64.2 14.8 124 664-822 4-131 (177)
110 2oit_A Nucleoporin 214KDA; NH2 97.3 0.0047 1.6E-07 72.0 17.9 195 3-241 40-257 (434)
111 2ojh_A Uncharacterized protein 97.3 0.02 6.7E-07 60.3 21.3 154 4-200 46-203 (297)
112 1qqe_A Vesicular transport pro 97.3 0.0054 1.9E-07 67.0 17.4 54 827-880 158-225 (292)
113 3bws_A Protein LP49; two-domai 97.3 0.015 5E-07 66.1 21.7 178 4-200 216-431 (433)
114 1l0q_A Surface layer protein; 97.3 0.017 6E-07 64.5 21.9 177 4-201 78-275 (391)
115 4gq1_A NUP37; propeller, trans 97.3 0.012 4.2E-07 67.0 20.7 106 8-126 98-216 (393)
116 2pm7_A Protein WEB1, protein t 97.3 0.0022 7.5E-08 74.3 14.3 138 722-866 144-286 (399)
117 3uq3_A Heat shock protein STI1 97.2 0.0014 4.8E-08 68.1 11.0 112 767-879 79-198 (258)
118 3iz6_a 40S ribosomal protein R 97.2 0.009 3.1E-07 67.6 18.4 184 4-201 162-375 (380)
119 4a1s_A PINS, partner of inscut 97.2 0.061 2.1E-06 60.4 25.2 21 714-734 132-152 (411)
120 4a11_B DNA excision repair pro 97.2 0.034 1.2E-06 61.9 22.8 209 4-241 104-351 (408)
121 1yfq_A Cell cycle arrest prote 97.2 0.015 5.1E-07 63.4 19.4 178 4-201 61-282 (342)
122 3ulq_A Response regulator aspa 97.1 0.015 5.3E-07 65.4 19.7 13 625-637 27-39 (383)
123 4gq1_A NUP37; propeller, trans 97.1 0.011 3.9E-07 67.3 18.7 177 4-200 141-388 (393)
124 3ro2_A PINS homolog, G-protein 97.1 0.033 1.1E-06 59.5 21.3 20 715-734 90-109 (338)
125 1w3b_A UDP-N-acetylglucosamine 97.1 0.0081 2.8E-07 67.4 17.0 162 715-879 142-330 (388)
126 2pbi_B Guanine nucleotide-bind 97.1 0.023 7.9E-07 63.7 20.5 173 4-198 159-354 (354)
127 3gre_A Serine/threonine-protei 97.1 0.059 2E-06 61.4 23.8 111 4-126 116-243 (437)
128 2y4t_A DNAJ homolog subfamily 97.1 0.0052 1.8E-07 70.1 14.9 163 714-879 100-320 (450)
129 2xpi_A Anaphase-promoting comp 97.1 0.023 7.8E-07 67.4 21.0 156 721-879 285-466 (597)
130 2j04_B YDR362CP, TAU91; beta p 97.0 0.0045 1.5E-07 74.3 14.7 175 6-200 317-516 (524)
131 3lrv_A PRE-mRNA-splicing facto 97.0 0.045 1.5E-06 60.6 22.0 177 4-201 81-292 (343)
132 3sf4_A G-protein-signaling mod 97.0 0.042 1.4E-06 61.1 21.4 21 714-734 93-113 (406)
133 1ri6_A Putative isomerase YBHE 97.0 0.029 1E-06 60.8 19.4 115 3-126 87-207 (343)
134 3v7d_B Cell division control p 97.0 0.81 2.8E-05 52.3 35.3 195 6-241 127-327 (464)
135 3ieg_A DNAJ homolog subfamily 97.0 0.018 6E-07 62.7 17.3 139 712-852 41-213 (359)
136 2ifu_A Gamma-SNAP; membrane fu 96.9 0.014 4.8E-07 64.2 16.4 59 786-852 122-180 (307)
137 3hym_B Cell division cycle pro 96.9 0.016 5.5E-07 62.5 16.6 161 715-879 63-261 (330)
138 4gga_A P55CDC, cell division c 96.9 0.039 1.3E-06 63.1 20.7 156 4-202 235-396 (420)
139 4e54_B DNA damage-binding prot 96.9 0.016 5.4E-07 66.8 17.3 109 4-126 169-280 (435)
140 1b89_A Protein (clathrin heavy 96.9 0.0019 6.4E-08 75.6 9.1 138 721-867 107-247 (449)
141 1xnf_A Lipoprotein NLPI; TPR, 96.9 0.012 4.3E-07 61.7 14.9 26 768-793 112-137 (275)
142 1w3b_A UDP-N-acetylglucosamine 96.9 0.016 5.6E-07 64.9 16.6 162 715-879 176-364 (388)
143 3edt_B KLC 2, kinesin light ch 96.9 0.027 9.3E-07 58.9 17.3 27 826-852 168-194 (283)
144 3vu4_A KMHSV2; beta-propeller 96.9 0.088 3E-06 58.9 22.5 204 4-242 24-258 (355)
145 3mkr_A Coatomer subunit epsilo 96.8 0.023 7.8E-07 62.4 17.0 79 712-793 105-192 (291)
146 3nf1_A KLC 1, kinesin light ch 96.8 0.046 1.6E-06 58.2 18.9 27 826-852 194-220 (311)
147 2ho1_A Type 4 fimbrial biogene 96.8 0.007 2.4E-07 63.1 12.2 107 769-876 107-231 (252)
148 3vgz_A Uncharacterized protein 96.8 0.22 7.6E-06 54.2 24.9 114 3-125 92-212 (353)
149 3sf4_A G-protein-signaling mod 96.8 0.16 5.6E-06 56.2 23.7 117 762-879 122-292 (406)
150 3hym_B Cell division cycle pro 96.7 0.044 1.5E-06 59.0 18.3 52 828-879 237-295 (330)
151 3scy_A Hypothetical bacterial 96.7 0.26 9.1E-06 54.5 25.0 101 4-114 159-275 (361)
152 3q15_A PSP28, response regulat 96.7 0.079 2.7E-06 59.5 20.9 19 691-709 74-92 (378)
153 3lrv_A PRE-mRNA-splicing facto 96.7 0.0085 2.9E-07 66.5 12.6 110 4-126 175-290 (343)
154 3hfq_A Uncharacterized protein 96.7 0.19 6.4E-06 55.3 23.4 115 4-127 90-217 (347)
155 3hfq_A Uncharacterized protein 96.7 0.98 3.4E-05 49.4 29.0 147 51-201 41-218 (347)
156 2ojh_A Uncharacterized protein 96.7 0.078 2.7E-06 55.6 19.1 110 4-127 89-203 (297)
157 1qqe_A Vesicular transport pro 96.6 0.021 7.3E-07 62.2 14.9 88 784-878 81-182 (292)
158 2vq2_A PILW, putative fimbrial 96.6 0.0099 3.4E-07 60.2 11.4 25 769-793 78-103 (225)
159 3q15_A PSP28, response regulat 96.6 0.44 1.5E-05 53.3 26.0 26 827-852 261-286 (378)
160 3ulq_A Response regulator aspa 96.6 0.36 1.2E-05 54.0 25.2 89 787-882 231-334 (383)
161 2pm7_A Protein WEB1, protein t 96.6 0.043 1.5E-06 63.5 17.4 131 654-805 145-286 (399)
162 3uq3_A Heat shock protein STI1 96.6 0.0087 3E-07 62.0 10.6 78 713-793 84-165 (258)
163 3cv0_A Peroxisome targeting si 96.5 0.0075 2.6E-07 65.0 10.4 134 714-850 95-263 (327)
164 4ggc_A P55CDC, cell division c 96.5 0.17 5.9E-06 54.1 21.2 156 4-201 155-315 (318)
165 3mkr_A Coatomer subunit epsilo 96.5 0.05 1.7E-06 59.6 17.0 126 720-852 11-155 (291)
166 3vgz_A Uncharacterized protein 96.5 0.76 2.6E-05 49.9 26.6 160 4-201 45-215 (353)
167 4a1s_A PINS, partner of inscut 96.5 0.11 3.8E-06 58.2 20.3 163 715-878 93-327 (411)
168 3u4y_A Uncharacterized protein 96.5 0.23 8E-06 53.8 22.2 178 4-200 44-251 (331)
169 2qfc_A PLCR protein; TPR, HTH, 96.5 0.042 1.4E-06 59.6 16.0 24 828-851 197-220 (293)
170 3cv0_A Peroxisome targeting si 96.5 0.015 5.2E-07 62.5 12.2 131 718-850 148-309 (327)
171 2ecf_A Dipeptidyl peptidase IV 96.5 0.21 7.1E-06 61.3 23.9 69 3-85 112-183 (741)
172 2ovr_B FBW7, F-BOX/WD repeat p 96.4 0.71 2.4E-05 52.7 26.9 201 10-244 208-427 (445)
173 2j04_B YDR362CP, TAU91; beta p 96.4 0.027 9.1E-07 67.6 15.2 178 4-200 212-427 (524)
174 1fch_A Peroxisomal targeting s 96.4 0.017 5.7E-07 63.8 12.5 80 713-793 137-243 (368)
175 3u4y_A Uncharacterized protein 96.4 0.08 2.7E-06 57.6 17.8 100 4-114 132-237 (331)
176 3vu4_A KMHSV2; beta-propeller 96.4 0.025 8.7E-07 63.4 14.1 113 4-127 200-335 (355)
177 3gw4_A Uncharacterized protein 96.4 0.083 2.8E-06 52.7 16.3 58 787-850 73-130 (203)
178 3v7d_B Cell division control p 96.4 0.16 5.6E-06 58.1 20.8 170 5-198 274-460 (464)
179 1pby_B Quinohemoprotein amine 96.3 0.39 1.3E-05 51.6 22.7 112 3-125 37-160 (337)
180 2ho1_A Type 4 fimbrial biogene 96.3 0.058 2E-06 56.0 15.0 136 713-850 76-232 (252)
181 2oit_A Nucleoporin 214KDA; NH2 96.3 0.01 3.6E-07 69.1 10.1 110 4-123 97-218 (434)
182 2ifu_A Gamma-SNAP; membrane fu 96.2 0.025 8.6E-07 62.1 12.5 86 784-877 80-178 (307)
183 3ro2_A PINS homolog, G-protein 96.2 0.75 2.6E-05 48.7 23.7 135 715-852 50-248 (338)
184 2hqs_A Protein TOLB; TOLB, PAL 96.2 2.5 8.5E-05 48.3 30.0 96 11-114 143-239 (415)
185 2z3z_A Dipeptidyl aminopeptida 96.2 0.48 1.7E-05 57.7 24.9 120 3-126 184-340 (706)
186 3u3w_A Transcriptional activat 96.2 0.38 1.3E-05 51.9 21.5 56 789-850 164-219 (293)
187 2q7f_A YRRB protein; TPR, prot 96.2 0.0049 1.7E-07 63.6 5.9 24 829-852 161-184 (243)
188 2oaj_A Protein SNI1; WD40 repe 96.1 0.13 4.3E-06 65.8 19.8 111 4-125 493-658 (902)
189 3vtx_A MAMA; tetratricopeptide 96.1 0.022 7.5E-07 56.6 10.2 77 715-793 12-99 (184)
190 4eqf_A PEX5-related protein; a 96.1 0.0083 2.8E-07 66.6 7.5 166 711-878 68-271 (365)
191 4eqf_A PEX5-related protein; a 96.0 0.042 1.4E-06 60.9 13.0 51 828-878 248-305 (365)
192 3u4t_A TPR repeat-containing p 96.0 0.23 8E-06 51.9 18.2 137 713-852 8-167 (272)
193 3fp2_A TPR repeat-containing p 95.9 0.075 2.6E-06 61.8 15.3 128 720-851 214-368 (537)
194 4abn_A Tetratricopeptide repea 95.9 0.032 1.1E-06 65.6 11.9 78 712-793 106-205 (474)
195 3gw4_A Uncharacterized protein 95.9 0.22 7.4E-06 49.6 16.5 20 715-734 33-52 (203)
196 1p22_A F-BOX/WD-repeat protein 95.8 1.3 4.3E-05 50.5 24.9 171 4-201 136-325 (435)
197 3fp2_A TPR repeat-containing p 95.7 0.068 2.3E-06 62.2 13.7 22 712-733 97-118 (537)
198 1fch_A Peroxisomal targeting s 95.7 0.048 1.6E-06 60.0 11.7 135 715-852 105-276 (368)
199 1xfd_A DIP, dipeptidyl aminope 95.7 0.18 6E-06 61.6 17.9 102 3-116 20-132 (723)
200 2qfc_A PLCR protein; TPR, HTH, 95.7 0.42 1.4E-05 51.6 19.0 100 717-817 84-220 (293)
201 2gw1_A Mitochondrial precursor 95.6 0.02 6.7E-07 66.2 8.5 23 712-734 77-99 (514)
202 3n71_A Histone lysine methyltr 95.6 0.68 2.3E-05 55.0 21.8 68 766-851 350-417 (490)
203 2gw1_A Mitochondrial precursor 95.6 0.091 3.1E-06 60.5 13.9 162 713-878 242-439 (514)
204 2ecf_A Dipeptidyl peptidase IV 95.6 0.44 1.5E-05 58.3 20.8 118 3-124 212-363 (741)
205 2pl2_A Hypothetical conserved 95.5 0.025 8.6E-07 58.7 8.2 51 828-878 152-209 (217)
206 3scy_A Hypothetical bacterial 95.5 0.21 7.3E-06 55.2 16.3 104 4-116 215-324 (361)
207 3as5_A MAMA; tetratricopeptide 95.5 0.074 2.5E-06 51.6 11.0 24 829-852 112-135 (186)
208 3u4t_A TPR repeat-containing p 95.5 0.059 2E-06 56.6 10.9 102 712-817 41-166 (272)
209 3edt_B KLC 2, kinesin light ch 95.4 0.089 3.1E-06 54.8 12.0 22 1022-1043 255-276 (283)
210 2ond_A Cleavage stimulation fa 95.3 0.045 1.5E-06 59.9 9.7 102 746-852 109-228 (308)
211 3n71_A Histone lysine methyltr 95.3 0.14 4.7E-06 60.9 14.5 60 787-852 400-460 (490)
212 1xfd_A DIP, dipeptidyl aminope 95.3 0.44 1.5E-05 58.1 19.4 78 4-85 65-145 (723)
213 3ro3_A PINS homolog, G-protein 95.3 0.19 6.6E-06 47.2 12.9 17 716-732 17-33 (164)
214 2vq2_A PILW, putative fimbrial 95.3 0.25 8.5E-06 49.6 14.4 110 769-879 44-172 (225)
215 3as5_A MAMA; tetratricopeptide 95.3 0.067 2.3E-06 51.9 9.7 82 768-850 77-167 (186)
216 3nf1_A KLC 1, kinesin light ch 95.2 0.38 1.3E-05 50.9 16.3 22 1022-1043 281-302 (311)
217 3mzk_B Protein transport prote 95.2 0.078 2.7E-06 61.9 11.4 125 727-855 156-305 (441)
218 2z3z_A Dipeptidyl aminopeptida 95.1 3.5 0.00012 50.0 26.6 59 3-68 124-199 (706)
219 2q7f_A YRRB protein; TPR, prot 95.0 0.042 1.4E-06 56.4 7.9 136 713-851 62-217 (243)
220 1jmx_B Amine dehydrogenase; ox 95.0 1.1 3.8E-05 48.4 19.7 101 4-117 4-111 (349)
221 1jmx_B Amine dehydrogenase; ox 95.0 1.5 5.1E-05 47.3 20.6 76 3-83 46-134 (349)
222 2ovr_B FBW7, F-BOX/WD repeat p 94.9 2.2 7.6E-05 48.5 22.9 169 5-202 123-309 (445)
223 2xdw_A Prolyl endopeptidase; a 94.9 3.8 0.00013 50.2 26.3 106 4-116 129-251 (710)
224 1xnf_A Lipoprotein NLPI; TPR, 94.8 0.34 1.2E-05 50.5 14.5 71 721-793 18-103 (275)
225 1k32_A Tricorn protease; prote 94.8 0.58 2E-05 60.3 19.2 101 4-117 383-491 (1045)
226 3vtx_A MAMA; tetratricopeptide 94.7 0.12 4.2E-06 51.1 10.1 108 768-876 40-163 (184)
227 1nir_A Nitrite reductase; hemo 94.5 0.94 3.2E-05 54.2 18.9 159 6-202 144-312 (543)
228 3qky_A Outer membrane assembly 94.5 0.21 7.1E-06 52.7 11.8 23 712-734 19-41 (261)
229 1p22_A F-BOX/WD-repeat protein 94.4 4 0.00014 46.3 23.3 168 5-201 179-365 (435)
230 3ro3_A PINS homolog, G-protein 94.3 0.8 2.7E-05 42.7 14.4 57 787-850 56-112 (164)
231 4gyw_A UDP-N-acetylglucosamine 94.3 0.078 2.7E-06 66.1 9.0 132 716-851 17-169 (723)
232 4i17_A Hypothetical protein; T 94.2 0.51 1.7E-05 48.4 13.7 24 829-852 119-142 (228)
233 4gyw_A UDP-N-acetylglucosamine 94.2 0.11 3.7E-06 64.9 9.9 133 731-876 19-167 (723)
234 2pl2_A Hypothetical conserved 94.2 0.12 4.1E-06 53.6 8.8 50 828-877 119-174 (217)
235 1jof_A Carboxy-CIS,CIS-muconat 94.1 0.5 1.7E-05 52.8 14.6 74 4-82 197-290 (365)
236 4g26_A Pentatricopeptide repea 94.0 0.32 1.1E-05 57.9 13.3 82 796-879 108-200 (501)
237 1pby_B Quinohemoprotein amine 94.0 1.6 5.4E-05 46.7 17.9 73 4-85 86-165 (337)
238 4gcn_A Protein STI-1; structur 94.0 0.5 1.7E-05 44.5 12.1 57 787-849 49-105 (127)
239 2yhc_A BAMD, UPF0169 lipoprote 94.0 1.1 3.7E-05 46.3 15.8 47 712-760 8-64 (225)
240 1z68_A Fibroblast activation p 93.9 0.88 3E-05 55.6 17.4 74 3-84 63-140 (719)
241 1k32_A Tricorn protease; prote 93.8 2 6.9E-05 55.3 21.3 98 4-119 300-400 (1045)
242 2ooe_A Cleavage stimulation fa 93.8 2.6 9E-05 49.4 20.7 98 752-852 260-381 (530)
243 1nir_A Nitrite reductase; hemo 93.8 1.4 4.8E-05 52.7 18.4 162 3-201 182-355 (543)
244 1xip_A Nucleoporin NUP159; bet 93.6 1.3 4.3E-05 51.0 16.7 178 3-241 41-230 (388)
245 3azo_A Aminopeptidase; POP fam 93.5 1.1 3.6E-05 54.2 17.0 104 4-109 134-254 (662)
246 1hz4_A MALT regulatory protein 93.5 6.5 0.00022 43.2 22.2 19 715-733 100-118 (373)
247 4a5s_A Dipeptidyl peptidase 4 93.4 3.6 0.00012 50.8 21.8 72 4-84 116-203 (740)
248 4b4t_Q 26S proteasome regulato 93.1 1.3 4.3E-05 49.9 15.7 87 766-852 134-241 (434)
249 3gyz_A Chaperone protein IPGC; 93.0 0.42 1.5E-05 47.1 10.1 101 745-850 18-127 (151)
250 2bkl_A Prolyl endopeptidase; m 92.8 6.1 0.00021 48.2 22.5 108 4-118 125-247 (695)
251 4ady_A RPN2, 26S proteasome re 92.6 11 0.00038 47.8 24.3 190 697-889 52-284 (963)
252 2yhc_A BAMD, UPF0169 lipoprote 92.6 3.8 0.00013 42.1 17.3 54 787-850 154-207 (225)
253 4abn_A Tetratricopeptide repea 92.3 0.083 2.9E-06 62.1 4.5 112 767-879 137-283 (474)
254 2fo7_A Synthetic consensus TPR 92.3 0.28 9.4E-06 44.4 7.2 24 829-852 71-94 (136)
255 2pzi_A Probable serine/threoni 92.1 0.21 7.3E-06 61.5 8.1 99 751-852 447-559 (681)
256 3pe7_A Oligogalacturonate lyas 92.1 2 6.7E-05 47.5 15.4 81 4-85 192-275 (388)
257 4ga2_A E3 SUMO-protein ligase 92.1 0.13 4.5E-06 50.1 5.0 104 721-852 10-124 (150)
258 4g1t_A Interferon-induced prot 92.0 4.2 0.00014 46.2 18.4 47 588-635 30-76 (472)
259 1yr2_A Prolyl oligopeptidase; 92.0 9.4 0.00032 47.0 22.8 106 4-117 167-287 (741)
260 2vsy_A XCC0866; transferase, g 92.0 0.27 9.1E-06 58.7 8.5 84 768-852 58-153 (568)
261 4b4t_Q 26S proteasome regulato 91.9 2.3 8E-05 47.7 16.0 50 827-876 135-197 (434)
262 2fo7_A Synthetic consensus TPR 91.8 0.24 8.3E-06 44.8 6.1 22 829-850 105-126 (136)
263 1hz4_A MALT regulatory protein 91.7 3.2 0.00011 45.8 16.5 59 788-852 101-160 (373)
264 3mv2_B Coatomer subunit epsilo 91.7 2.5 8.5E-05 47.1 15.3 37 841-877 192-234 (310)
265 3e5z_A Putative gluconolactona 91.7 11 0.00039 39.9 20.5 175 4-199 73-284 (296)
266 4a5s_A Dipeptidyl peptidase 4 91.6 2.6 8.8E-05 52.0 17.1 80 4-83 175-294 (740)
267 1ouv_A Conserved hypothetical 91.5 0.61 2.1E-05 49.2 9.9 126 721-852 55-211 (273)
268 3urz_A Uncharacterized protein 91.4 0.69 2.4E-05 47.3 9.9 24 711-734 7-30 (208)
269 2gop_A Trilobed protease; beta 91.4 2.3 7.8E-05 46.3 14.6 96 4-108 63-182 (347)
270 3o4h_A Acylamino-acid-releasin 91.3 0.79 2.7E-05 54.5 11.7 107 4-122 154-270 (582)
271 3qwp_A SET and MYND domain-con 91.3 4.7 0.00016 46.8 17.9 67 766-850 328-394 (429)
272 2fbn_A 70 kDa peptidylprolyl i 91.2 0.15 5.3E-06 51.5 4.6 43 751-793 18-64 (198)
273 3dr2_A Exported gluconolactona 91.2 6.5 0.00022 42.4 18.0 111 4-126 90-222 (305)
274 4i17_A Hypothetical protein; T 91.2 2.2 7.5E-05 43.5 13.4 24 829-852 78-101 (228)
275 3o4h_A Acylamino-acid-releasin 91.1 7.2 0.00025 46.1 19.7 70 4-81 26-95 (582)
276 4gco_A Protein STI-1; structur 91.1 0.46 1.6E-05 44.8 7.5 22 829-850 83-104 (126)
277 1q7f_A NHL, brain tumor CG1071 91.0 9.1 0.00031 40.3 18.6 70 4-83 125-194 (286)
278 3qww_A SET and MYND domain-con 91.0 2.2 7.4E-05 49.8 14.6 68 766-851 339-406 (433)
279 1jof_A Carboxy-CIS,CIS-muconat 90.9 3.5 0.00012 45.8 15.8 71 4-82 149-223 (365)
280 1hh8_A P67PHOX, NCF-2, neutrop 90.7 1.7 5.8E-05 43.6 11.8 18 717-734 15-32 (213)
281 3u3w_A Transcriptional activat 90.5 8.5 0.00029 41.1 17.9 18 871-888 261-278 (293)
282 3qky_A Outer membrane assembly 90.5 3.8 0.00013 42.8 14.8 23 712-734 56-78 (261)
283 4f3v_A ESX-1 secretion system 90.4 1.5 5.1E-05 48.2 11.8 86 766-852 101-196 (282)
284 1a17_A Serine/threonine protei 90.4 1.1 3.7E-05 42.7 9.6 22 829-850 83-104 (166)
285 3sz7_A HSC70 cochaperone (SGT) 90.4 0.88 3E-05 44.2 9.1 20 830-849 82-101 (164)
286 4g1t_A Interferon-induced prot 90.1 1.4 4.9E-05 50.1 12.0 46 833-878 219-271 (472)
287 1ouv_A Conserved hypothetical 89.7 2.3 8E-05 44.6 12.4 132 716-852 14-175 (273)
288 2pzi_A Probable serine/threoni 89.5 0.62 2.1E-05 57.4 8.7 134 712-850 437-599 (681)
289 1hh8_A P67PHOX, NCF-2, neutrop 89.5 1.5 5.3E-05 43.9 10.3 25 828-852 72-96 (213)
290 2xm6_A Protein corresponding t 89.3 6.4 0.00022 45.6 16.8 179 693-876 93-318 (490)
291 3upv_A Heat shock protein STI1 88.9 0.73 2.5E-05 42.4 6.9 22 829-850 74-95 (126)
292 2vsy_A XCC0866; transferase, g 88.9 0.86 2.9E-05 54.2 9.2 109 769-878 25-152 (568)
293 2vgx_A Chaperone SYCD; alterna 88.9 0.65 2.2E-05 45.0 6.7 40 751-793 8-47 (148)
294 1rwi_B Serine/threonine-protei 88.7 13 0.00043 38.5 17.2 105 4-125 71-177 (270)
295 2ond_A Cleavage stimulation fa 88.2 13 0.00043 40.1 17.3 132 717-850 108-264 (308)
296 1xip_A Nucleoporin NUP159; bet 88.1 9 0.00031 43.9 16.6 59 4-70 167-234 (388)
297 3fvz_A Peptidyl-glycine alpha- 87.9 25 0.00085 38.2 19.6 71 4-82 95-174 (329)
298 2qx5_A Nucleoporin NIC96; mRNA 87.8 6.2 0.00021 48.4 15.7 152 715-874 301-487 (661)
299 2dg1_A DRP35, lactonase; beta 87.8 26 0.0009 37.5 19.6 102 4-117 49-153 (333)
300 2ooe_A Cleavage stimulation fa 87.6 4.5 0.00015 47.4 14.1 26 768-793 357-382 (530)
301 3qou_A Protein YBBN; thioredox 87.5 0.95 3.3E-05 49.0 7.6 25 828-852 220-244 (287)
302 1q7f_A NHL, brain tumor CG1071 87.5 6.3 0.00021 41.6 14.0 70 4-83 168-238 (286)
303 1na0_A Designed protein CTPR3; 87.2 1.2 4.1E-05 39.7 7.0 20 831-850 47-66 (125)
304 2w18_A PALB2, fancn, partner a 87.2 23 0.00079 40.0 18.8 59 4-68 183-245 (356)
305 3mv2_B Coatomer subunit epsilo 87.2 6.7 0.00023 43.6 14.3 101 715-816 107-234 (310)
306 3qou_A Protein YBBN; thioredox 87.1 2.5 8.6E-05 45.6 10.7 24 828-851 256-279 (287)
307 3q49_B STIP1 homology and U bo 87.1 2.3 8E-05 39.1 9.1 22 829-850 79-100 (137)
308 1kt0_A FKBP51, 51 kDa FK506-bi 87.0 0.73 2.5E-05 53.7 6.8 20 786-805 323-342 (457)
309 1elw_A TPR1-domain of HOP; HOP 87.0 1.2 4.2E-05 39.2 6.9 22 829-850 74-95 (118)
310 1p5q_A FKBP52, FK506-binding p 87.0 0.51 1.7E-05 52.6 5.2 52 786-850 202-253 (336)
311 2qx5_A Nucleoporin NIC96; mRNA 87.0 1.9 6.5E-05 52.9 10.5 109 764-880 440-564 (661)
312 1elr_A TPR2A-domain of HOP; HO 86.8 2.1 7.1E-05 38.5 8.4 22 829-850 81-102 (131)
313 3iuj_A Prolyl endopeptidase; h 86.7 65 0.0022 39.2 26.4 75 4-83 133-217 (693)
314 3qww_A SET and MYND domain-con 86.4 1.6 5.6E-05 50.8 9.2 23 769-791 384-406 (433)
315 2xm6_A Protein corresponding t 86.3 21 0.00071 41.1 18.7 156 692-851 128-320 (490)
316 3rkv_A Putative peptidylprolyl 86.2 1.4 4.7E-05 42.7 7.3 22 829-850 65-86 (162)
317 2r5s_A Uncharacterized protein 86.1 2.5 8.5E-05 41.6 9.2 25 828-852 109-133 (176)
318 4ga2_A E3 SUMO-protein ligase 86.0 0.76 2.6E-05 44.5 5.2 97 691-790 9-122 (150)
319 1z68_A Fibroblast activation p 85.8 1.8 6.3E-05 52.7 9.7 60 3-69 113-188 (719)
320 3gyz_A Chaperone protein IPGC; 85.8 3.5 0.00012 40.4 10.0 25 769-793 72-96 (151)
321 3pe7_A Oligogalacturonate lyas 85.7 3.4 0.00012 45.5 11.1 80 5-85 243-331 (388)
322 2ghs_A AGR_C_1268P; regucalcin 85.6 27 0.00093 38.0 18.3 96 3-117 52-152 (326)
323 3mzk_B Protein transport prote 85.2 6.8 0.00023 45.6 13.5 91 789-882 159-264 (441)
324 2hr2_A Hypothetical protein; a 85.1 4.4 0.00015 40.7 10.3 59 786-850 17-80 (159)
325 2dba_A Smooth muscle cell asso 85.0 1.5 5E-05 40.8 6.5 22 829-850 101-122 (148)
326 1kt0_A FKBP51, 51 kDa FK506-bi 85.0 2.8 9.5E-05 48.8 10.3 26 768-793 318-343 (457)
327 2vyi_A SGTA protein; chaperone 84.5 2.2 7.6E-05 38.1 7.4 20 830-849 83-102 (131)
328 2lni_A Stress-induced-phosphop 84.4 1.6 5.3E-05 39.6 6.3 22 829-850 86-107 (133)
329 2xcb_A PCRH, regulatory protei 84.1 1.9 6.4E-05 40.9 7.0 19 831-849 90-108 (142)
330 2dba_A Smooth muscle cell asso 83.4 9.2 0.00032 35.1 11.5 50 827-876 65-121 (148)
331 2c2l_A CHIP, carboxy terminus 83.3 2.9 9.8E-05 45.0 8.8 51 801-852 46-97 (281)
332 2xdw_A Prolyl endopeptidase; a 82.8 92 0.0032 37.7 33.2 62 51-116 126-189 (710)
333 2ece_A 462AA long hypothetical 82.7 61 0.0021 37.9 20.0 186 5-204 143-355 (462)
334 4gco_A Protein STI-1; structur 82.6 6.8 0.00023 36.6 10.1 77 786-875 19-102 (126)
335 1a17_A Serine/threonine protei 82.6 1.4 4.9E-05 41.8 5.5 23 712-734 17-39 (166)
336 2lni_A Stress-induced-phosphop 82.4 2.3 7.8E-05 38.5 6.6 25 769-793 52-76 (133)
337 2kck_A TPR repeat; tetratricop 82.2 1.6 5.6E-05 38.1 5.3 22 829-850 78-100 (112)
338 4f3v_A ESX-1 secretion system 82.1 4.3 0.00015 44.5 9.6 24 828-851 209-232 (282)
339 1p5q_A FKBP52, FK506-binding p 81.9 3.2 0.00011 46.1 8.7 80 768-848 197-285 (336)
340 3pbp_A Nucleoporin NUP82; beta 81.9 3.6 0.00012 47.8 9.1 108 9-127 21-157 (452)
341 1ihg_A Cyclophilin 40; ppiase 81.8 3.1 0.00011 47.1 8.7 52 786-850 279-330 (370)
342 2hr2_A Hypothetical protein; a 81.7 3.7 0.00013 41.2 8.2 61 783-850 60-125 (159)
343 1ihg_A Cyclophilin 40; ppiase 81.5 2.7 9.1E-05 47.6 8.0 127 711-849 226-363 (370)
344 4gcn_A Protein STI-1; structur 81.4 6.4 0.00022 36.7 9.5 19 787-805 90-108 (127)
345 3qwp_A SET and MYND domain-con 81.3 6.3 0.00022 45.7 11.2 47 787-839 378-425 (429)
346 3urz_A Uncharacterized protein 80.8 6.6 0.00023 39.8 10.1 64 714-780 60-135 (208)
347 3c5m_A Oligogalacturonate lyas 80.7 11 0.00037 41.3 12.6 81 4-85 192-275 (396)
348 2r5s_A Uncharacterized protein 79.9 5.4 0.00019 39.1 8.8 24 829-852 146-169 (176)
349 2xev_A YBGF; tetratricopeptide 79.6 15 0.0005 33.1 11.2 81 787-877 9-99 (129)
350 3rkv_A Putative peptidylprolyl 79.4 6.9 0.00024 37.6 9.2 27 768-794 12-38 (162)
351 3e5z_A Putative gluconolactona 79.0 25 0.00085 37.2 14.4 101 4-123 176-281 (296)
352 1na0_A Designed protein CTPR3; 78.8 24 0.00084 30.7 12.2 84 766-850 8-100 (125)
353 3upv_A Heat shock protein STI1 78.7 11 0.00039 34.1 10.1 79 784-875 8-93 (126)
354 2dg1_A DRP35, lactonase; beta 78.7 24 0.00083 37.7 14.4 61 4-66 91-151 (333)
355 1elr_A TPR2A-domain of HOP; HO 78.6 8.8 0.0003 34.1 9.2 24 829-852 40-63 (131)
356 3sz7_A HSC70 cochaperone (SGT) 78.3 13 0.00044 35.7 10.8 76 787-875 18-100 (164)
357 2e2e_A Formate-dependent nitri 78.1 3.6 0.00012 40.0 6.8 21 771-791 48-68 (177)
358 2mad_H Methylamine dehydrogena 78.0 85 0.0029 35.1 19.1 61 4-68 129-194 (373)
359 1rwi_B Serine/threonine-protei 77.9 65 0.0022 32.9 19.7 105 4-124 28-134 (270)
360 2h6f_A Protein farnesyltransfe 77.8 12 0.0004 42.6 11.9 22 713-734 136-158 (382)
361 3ma5_A Tetratricopeptide repea 77.6 25 0.00085 30.9 11.8 52 786-850 13-64 (100)
362 3azo_A Aminopeptidase; POP fam 77.5 8.1 0.00028 46.3 11.0 75 4-83 81-170 (662)
363 3g4e_A Regucalcin; six bladed 77.5 78 0.0027 33.6 20.2 68 3-85 16-84 (297)
364 2vyi_A SGTA protein; chaperone 77.0 2.3 7.9E-05 38.0 4.6 20 715-734 19-38 (131)
365 1wao_1 Serine/threonine protei 76.2 0.65 2.2E-05 54.6 0.8 51 828-878 75-134 (477)
366 2xcb_A PCRH, regulatory protei 75.7 20 0.00069 33.5 11.2 50 828-877 53-109 (142)
367 2kc7_A BFR218_protein; tetratr 75.4 2.7 9.3E-05 36.6 4.5 25 769-793 37-61 (99)
368 1hxi_A PEX5, peroxisome target 75.2 3 0.0001 38.7 5.0 22 829-850 87-108 (121)
369 3c5m_A Oligogalacturonate lyas 74.2 31 0.0011 37.5 13.9 72 5-85 243-331 (396)
370 1hxi_A PEX5, peroxisome target 74.0 32 0.0011 31.5 11.9 57 783-852 20-76 (121)
371 2gop_A Trilobed protease; beta 73.9 21 0.00072 38.4 12.3 98 5-116 20-122 (347)
372 3q49_B STIP1 homology and U bo 73.8 18 0.00062 32.8 10.1 79 785-876 14-99 (137)
373 3ffl_A Anaphase-promoting comp 73.2 7.5 0.00026 39.2 7.5 50 743-793 27-89 (167)
374 2kck_A TPR repeat; tetratricop 73.2 4.7 0.00016 34.9 5.6 80 786-878 12-101 (112)
375 1elw_A TPR1-domain of HOP; HOP 73.0 20 0.00069 30.9 9.9 80 786-878 10-96 (118)
376 2if4_A ATFKBP42; FKBP-like, al 72.9 2 6.7E-05 47.9 3.6 24 829-852 266-289 (338)
377 2xev_A YBGF; tetratricopeptide 72.7 21 0.00073 31.9 10.2 55 787-851 46-100 (129)
378 2bkl_A Prolyl endopeptidase; m 72.4 24 0.0008 43.0 13.4 79 3-81 171-259 (695)
379 3k9i_A BH0479 protein; putativ 72.3 2.6 8.8E-05 38.4 3.7 10 780-789 40-49 (117)
380 2vgx_A Chaperone SYCD; alterna 71.2 8.2 0.00028 37.0 7.3 53 787-852 62-114 (148)
381 2if4_A ATFKBP42; FKBP-like, al 69.8 4.3 0.00015 45.1 5.5 22 829-850 232-253 (338)
382 1qks_A Cytochrome CD1 nitrite 69.8 1.3E+02 0.0045 35.9 18.8 163 4-201 201-373 (567)
383 3k9i_A BH0479 protein; putativ 67.6 28 0.00094 31.3 9.7 53 787-852 34-86 (117)
384 2oiz_A Aromatic amine dehydrog 67.2 1.5E+02 0.0052 32.5 20.9 81 4-85 54-142 (361)
385 2fbn_A 70 kDa peptidylprolyl i 67.2 29 0.00099 34.2 10.7 89 782-876 40-144 (198)
386 4g26_A Pentatricopeptide repea 66.1 25 0.00087 41.4 11.4 52 828-879 106-165 (501)
387 2c2l_A CHIP, carboxy terminus 65.5 34 0.0011 36.4 11.4 81 785-878 9-96 (281)
388 2ghs_A AGR_C_1268P; regucalcin 65.4 1.5E+02 0.0052 31.8 18.6 72 4-82 138-209 (326)
389 2l6j_A TPR repeat-containing p 64.1 5.3 0.00018 35.0 3.9 55 786-853 10-64 (111)
390 3no2_A Uncharacterized protein 63.2 83 0.0028 33.4 14.0 70 5-82 82-154 (276)
391 2h6f_A Protein farnesyltransfe 62.9 8.1 0.00028 43.9 6.0 25 828-852 167-191 (382)
392 1wao_1 Serine/threonine protei 62.2 1.7 5.8E-05 51.0 0.2 20 715-734 13-32 (477)
393 4aez_C MAD3, mitotic spindle c 61.4 58 0.002 34.3 11.7 26 826-851 149-174 (223)
394 2e2e_A Formate-dependent nitri 61.1 7.1 0.00024 37.9 4.5 21 714-734 50-70 (177)
395 2l6j_A TPR repeat-containing p 60.4 24 0.00083 30.5 7.6 18 774-791 11-28 (111)
396 1yr2_A Prolyl oligopeptidase; 59.2 3.1E+02 0.01 33.3 29.5 61 51-116 164-226 (741)
397 3rjv_A Putative SEL1 repeat pr 58.7 46 0.0016 33.5 10.5 19 716-734 26-44 (212)
398 2kat_A Uncharacterized protein 58.2 90 0.0031 27.4 11.3 22 829-850 55-76 (115)
399 3no2_A Uncharacterized protein 58.1 1.9E+02 0.0065 30.5 16.5 67 3-81 40-106 (276)
400 1na3_A Designed protein CTPR2; 56.6 13 0.00045 31.0 5.0 25 828-852 44-68 (91)
401 3dsm_A Uncharacterized protein 56.3 2.2E+02 0.0074 30.6 17.1 82 26-114 151-241 (328)
402 3esl_A Checkpoint serine/threo 55.9 1E+02 0.0036 31.9 12.3 66 761-851 74-139 (202)
403 1pjx_A Dfpase, DIISOPROPYLFLUO 55.4 2E+02 0.0067 29.9 16.3 73 4-82 121-206 (314)
404 4e6h_A MRNA 3'-END-processing 55.2 1E+02 0.0035 37.7 14.4 201 656-867 171-496 (679)
405 1na3_A Designed protein CTPR2; 54.9 38 0.0013 28.0 7.7 11 854-864 56-66 (91)
406 3rjv_A Putative SEL1 repeat pr 53.8 29 0.00098 35.1 7.9 16 692-707 31-46 (212)
407 3g4e_A Regucalcin; six bladed 53.7 1E+02 0.0034 32.7 12.6 103 4-117 153-261 (297)
408 2w18_A PALB2, fancn, partner a 51.5 88 0.003 35.3 11.9 50 73-126 304-355 (356)
409 1zu2_A Mitochondrial import re 51.1 33 0.0011 34.1 7.5 57 769-841 38-94 (158)
410 2xe4_A Oligopeptidase B; hydro 50.7 1E+02 0.0035 38.0 13.6 62 4-69 178-240 (751)
411 1zu2_A Mitochondrial import re 50.3 12 0.0004 37.5 4.0 14 720-733 14-27 (158)
412 3ma5_A Tetratricopeptide repea 49.8 72 0.0025 27.7 9.0 17 788-804 49-65 (100)
413 3ffl_A Anaphase-promoting comp 49.8 1.2E+02 0.0043 30.3 11.3 58 822-879 58-147 (167)
414 4a1g_A Mitotic checkpoint seri 49.3 27 0.00092 34.7 6.4 27 766-792 100-126 (152)
415 3dr2_A Exported gluconolactona 49.2 2E+02 0.007 30.3 14.2 109 4-124 192-302 (305)
416 2p58_C Putative type III secre 48.9 49 0.0017 30.7 7.4 59 827-887 7-73 (116)
417 3e4b_A ALGK; tetratricopeptide 48.7 2.9E+02 0.01 31.3 16.3 20 490-509 10-29 (452)
418 3myf_A Sensor protein; HPT, hi 47.9 1.4E+02 0.0049 27.8 11.1 72 752-839 7-84 (119)
419 1klx_A Cysteine rich protein B 46.8 26 0.00088 33.1 5.8 26 768-793 58-87 (138)
420 2kc7_A BFR218_protein; tetratr 46.7 62 0.0021 27.5 7.9 53 786-851 6-59 (99)
421 3spa_A Mtrpol, DNA-directed RN 46.4 52 0.0018 42.3 9.7 80 797-878 131-225 (1134)
422 2uwj_G Type III export protein 45.7 50 0.0017 30.6 6.9 60 826-887 5-72 (115)
423 3hrp_A Uncharacterized protein 44.7 1.6E+02 0.0055 33.1 13.1 69 4-83 135-203 (409)
424 2v5f_A Prolyl 4-hydroxylase su 44.6 62 0.0021 28.8 7.8 63 769-850 7-69 (104)
425 4fhn_B Nucleoporin NUP120; pro 44.4 5.6E+02 0.019 33.1 19.6 121 712-835 846-1011(1139)
426 4b4t_R RPN7, 26S proteasome re 44.4 28 0.00095 40.2 6.6 84 769-852 133-233 (429)
427 2mad_H Methylamine dehydrogena 43.8 3.7E+02 0.013 29.7 23.8 84 4-91 70-162 (373)
428 1pjx_A Dfpase, DIISOPROPYLFLUO 43.2 96 0.0033 32.4 10.3 68 4-82 230-298 (314)
429 3fvz_A Peptidyl-glycine alpha- 39.7 3.7E+02 0.013 28.5 24.8 75 4-83 28-121 (329)
430 2kat_A Uncharacterized protein 39.4 54 0.0018 28.9 6.5 22 771-792 23-44 (115)
431 4b4t_P 26S proteasome regulato 39.2 4E+02 0.014 30.6 15.4 88 765-852 135-243 (445)
432 4h7y_A Dual specificity protei 37.2 84 0.0029 31.3 7.6 27 766-793 60-86 (161)
433 1qks_A Cytochrome CD1 nitrite 36.4 6E+02 0.021 30.0 20.1 155 11-202 166-330 (567)
434 3pbp_A Nucleoporin NUP82; beta 35.7 1.8E+02 0.006 33.8 11.2 106 5-121 71-205 (452)
435 3hrp_A Uncharacterized protein 35.5 2.5E+02 0.0086 31.5 12.8 73 5-85 176-251 (409)
436 3lvg_A Clathrin heavy chain 1; 35.2 20 0.00068 42.4 3.2 157 722-892 305-505 (624)
437 2qc5_A Streptogramin B lactona 34.7 3.7E+02 0.013 27.2 13.1 68 4-82 24-91 (300)
438 3iko_C Nucleoporin NUP84; NPC, 33.9 40 0.0014 39.4 5.7 88 783-874 180-286 (460)
439 2wb7_A PT26-6P; extra chromoso 33.8 1.3E+02 0.0046 35.1 9.7 61 809-872 455-518 (526)
440 3re2_A Predicted protein; meni 33.0 95 0.0032 35.0 7.9 83 712-824 243-334 (472)
441 2ff4_A Probable regulatory pro 32.7 4E+02 0.014 29.8 13.8 50 799-852 177-230 (388)
442 2z2n_A Virginiamycin B lyase; 32.2 4.1E+02 0.014 26.9 15.3 68 4-82 187-254 (299)
443 2uy1_A Cleavage stimulation fa 31.7 2.6E+02 0.009 32.4 12.4 27 751-779 110-136 (493)
444 2wm9_A Dedicator of cytokinesi 31.4 84 0.0029 36.3 7.8 103 762-872 6-126 (428)
445 1wfd_A Hypothetical protein 15 31.4 1.1E+02 0.0038 27.5 7.0 41 739-779 31-71 (93)
446 3u84_A Menin; MLL, JUND, ledgf 31.1 1E+02 0.0035 35.3 7.9 84 711-824 264-356 (550)
447 2oiz_A Aromatic amine dehydrog 30.9 5.5E+02 0.019 27.9 17.5 100 26-148 30-143 (361)
448 1smp_I Erwinia chrysanthemi in 30.2 47 0.0016 30.6 4.3 38 2-45 53-90 (101)
449 2yin_A DOCK2, dedicator of cyt 30.2 1.6E+02 0.0055 34.0 9.9 32 1036-1067 378-409 (436)
450 4gns_B Protein CSD3, chitin bi 28.3 56 0.0019 40.6 5.9 54 768-821 338-399 (754)
451 2z2n_A Virginiamycin B lyase; 28.1 4.8E+02 0.016 26.3 20.4 67 4-81 61-127 (299)
452 4ady_A RPN2, 26S proteasome re 28.1 1E+03 0.035 30.2 17.5 94 721-817 158-274 (963)
453 2p4o_A Hypothetical protein; p 27.9 99 0.0034 33.0 7.3 52 4-65 36-87 (306)
454 4a1g_A Mitotic checkpoint seri 27.0 1.5E+02 0.0052 29.3 7.6 62 760-851 64-125 (152)
455 2xe4_A Oligopeptidase B; hydro 26.9 1.6E+02 0.0056 36.1 9.9 78 3-82 224-303 (751)
456 2wb7_A PT26-6P; extra chromoso 25.9 1.2E+02 0.004 35.6 7.4 64 723-793 425-494 (526)
457 1bpo_A Protein (clathrin); cla 25.9 3.6E+02 0.012 31.5 11.5 141 615-805 334-494 (494)
458 3txn_A 26S proteasome regulato 25.8 6.9E+02 0.024 28.3 14.0 83 769-852 101-206 (394)
459 3dsm_A Uncharacterized protein 25.7 1.5E+02 0.0051 31.9 8.3 75 4-85 176-255 (328)
460 2v5f_A Prolyl 4-hydroxylase su 25.7 97 0.0033 27.5 5.7 17 789-805 55-71 (104)
461 4b4t_R RPN7, 26S proteasome re 24.4 1.1E+02 0.0037 35.1 7.1 78 715-793 138-234 (429)
462 1klx_A Cysteine rich protein B 23.4 3.5E+02 0.012 24.9 9.5 13 722-734 9-21 (138)
463 3sjl_D Methylamine dehydrogena 23.2 6E+02 0.021 28.6 12.9 159 9-201 42-208 (386)
464 3lvg_A Clathrin heavy chain 1; 23.0 18 0.00061 42.8 0.1 86 784-885 458-543 (624)
465 2qc5_A Streptogramin B lactona 22.9 5.9E+02 0.02 25.6 21.5 68 4-82 66-133 (300)
466 3e4b_A ALGK; tetratricopeptide 22.8 7.4E+02 0.025 27.8 13.9 69 721-793 264-348 (452)
467 2yin_A DOCK2, dedicator of cyt 22.4 2.9E+02 0.0099 31.8 10.2 23 857-879 95-117 (436)
468 1jiw_I Proteinase inhibitor; p 22.4 57 0.002 30.3 3.3 39 2-45 56-94 (106)
469 3dra_A Protein farnesyltransfe 22.2 5.4E+02 0.019 27.8 11.9 16 623-638 29-44 (306)
470 2wm9_A Dedicator of cytokinesi 22.1 1.5E+02 0.0053 34.0 7.7 31 1037-1067 371-401 (428)
471 2uy1_A Cleavage stimulation fa 21.6 3.3E+02 0.011 31.6 10.6 39 751-793 200-239 (493)
472 2v6x_A Vacuolar protein sortin 21.2 1.3E+02 0.0045 26.3 5.4 63 774-839 1-69 (85)
473 3mv2_A Coatomer subunit alpha; 21.0 2.3E+02 0.008 31.4 8.4 22 797-818 211-232 (325)
No 1
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.77 E-value=1e-14 Score=182.01 Aligned_cols=138 Identities=17% Similarity=0.181 Sum_probs=107.5
Q ss_pred hhcHHHHHHHHHHcCCCcHHHHHHHHHHHhcchHHHHhccCCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHH
Q 001314 721 LQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAM 800 (1102)
Q Consensus 721 LkryekAl~hl~~~g~~~~deAie~~~~~~~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl 800 (1102)
+|.+++|++... + .....++.... +.|+.|++++ ..+.+...|+.+|.++.+.|+++.|.
T Consensus 642 ~~~~~~a~~~~~---~--~~~~f~~~l~~-~~~~~A~~~~--------------~~~~~~~~W~~la~~al~~~~~~~A~ 701 (814)
T 3mkq_A 642 QEYYEEALNISP---D--QDQKFELALKV-GQLTLARDLL--------------TDESAEMKWRALGDASLQRFNFKLAI 701 (814)
T ss_dssp TTCHHHHHHHCC---C--HHHHHHHHHHH-TCHHHHHHHH--------------TTCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCChHHheecCC---C--cchheehhhhc-CCHHHHHHHH--------------HhhCcHhHHHHHHHHHHHcCCHHHHH
Confidence 667777775532 1 34445556666 7788888765 33334567888888888899999999
Q ss_pred HHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcCCHHHHHHHHHHhcCHHHHHHHHHhc
Q 001314 801 KAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMH 880 (1102)
Q Consensus 801 ~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylgD~e~AI~~y~~~~~W~eA~rLa~~h 880 (1102)
+||.++++|+.+..+....+ .. +...++++.....|++..|..+|+. +||+++|+++|++.++|++|+.||.+|
T Consensus 702 ~~y~~~~d~~~l~~l~~~~~-~~----~~~~~~~~~a~~~~~~~~A~~~~~~-~g~~~~a~~~~~~~~~~~~A~~lA~~~ 775 (814)
T 3mkq_A 702 EAFTNAHDLESLFLLHSSFN-NK----EGLVTLAKDAETTGKFNLAFNAYWI-AGDIQGAKDLLIKSQRFSEAAFLGSTY 775 (814)
T ss_dssp HHHHHHTCHHHHHHHHHHTT-CH----HHHHHHHHHHHHTTCHHHHHHHHHH-HTCHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHccChhhhHHHHHHcC-CH----HHHHHHHHHHHHcCchHHHHHHHHH-cCCHHHHHHHHHHcCChHHHHHHHHHh
Confidence 99999999998888876643 22 3456677888889999999999865 999999999999999999999999999
Q ss_pred CChh
Q 001314 881 RRED 884 (1102)
Q Consensus 881 ~~~d 884 (1102)
...+
T Consensus 776 ~~~~ 779 (814)
T 3mkq_A 776 GLGD 779 (814)
T ss_dssp TCCH
T ss_pred CCCh
Confidence 8655
No 2
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.39 E-value=5.6e-09 Score=130.14 Aligned_cols=149 Identities=15% Similarity=0.158 Sum_probs=113.5
Q ss_pred chHHHHHHHHhccCHHHHHHHHHHhcCCcchhhHHHHHHhcCChhhhchhHHHhhhcHHHHHHHHHHcCCCcHHHHHHHH
Q 001314 667 DSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLM 746 (1102)
Q Consensus 667 Dvn~Ly~~ALg~YDl~Lal~VAq~sqkDPkEYLpfL~~L~~le~~~rr~~Id~~LkryekAl~hl~~~g~~~~deAie~~ 746 (1102)
|...-|+.||.+-+|+.|+.+|+.. .+| ..|+++.+...+.|+ ++.|.+.+
T Consensus 654 ~~~~~f~~~l~~~~~~~A~~~~~~~-~~~--------------------------~~W~~la~~al~~~~--~~~A~~~y 704 (814)
T 3mkq_A 654 DQDQKFELALKVGQLTLARDLLTDE-SAE--------------------------MKWRALGDASLQRFN--FKLAIEAF 704 (814)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHTTC-CCH--------------------------HHHHHHHHHHHHTTC--HHHHHHHH
T ss_pred CcchheehhhhcCCHHHHHHHHHhh-CcH--------------------------hHHHHHHHHHHHcCC--HHHHHHHH
Confidence 4444477888899999888777532 223 245555555556655 66666666
Q ss_pred HHHhcchHHHHhcc---CCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCCh
Q 001314 747 KKYAQLFPLGLKLI---TDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGK 823 (1102)
Q Consensus 747 ~~~~~Ly~~AL~L~---~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~ 823 (1102)
.+. +.|..+..|+ .+++.. ...|+-.+..++++.|..+|.++|++++|+++|.++++|.+|+.+|+.++...
T Consensus 705 ~~~-~d~~~l~~l~~~~~~~~~~----~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~~~~~~~~A~~lA~~~~~~~ 779 (814)
T 3mkq_A 705 TNA-HDLESLFLLHSSFNNKEGL----VTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLGSTYGLGD 779 (814)
T ss_dssp HHH-TCHHHHHHHHHHTTCHHHH----HHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHTTCCH
T ss_pred HHc-cChhhhHHHHHHcCCHHHH----HHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHHHcCChHHHHHHHHHhCCCh
Confidence 666 6777776666 344433 34678888899999999999999999999999999999999999999987665
Q ss_pred HHHHHHHHHHHHHHHHcCChHHHHHH
Q 001314 824 DEVAKLAQELCEELQALGKPGEAAKI 849 (1102)
Q Consensus 824 ~el~~l~~~lA~~L~~~g~~~eAa~i 849 (1102)
+.+..+..+.+++|.+.|++..|..+
T Consensus 780 ~~i~~~~~~~~~~L~~~~~~~~a~~l 805 (814)
T 3mkq_A 780 NEVNDIVTKWKENLILNGKNTVSERV 805 (814)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHTTB
T ss_pred HHHHHHHHHHHHHHHhccchhHHHhh
Confidence 45889999999999999997666543
No 3
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.77 E-value=6.9e-07 Score=115.33 Aligned_cols=186 Identities=12% Similarity=0.116 Sum_probs=143.5
Q ss_pred CcchhhHHHHHHhcCChhhhchhHHHhhhcHHHHHHHHHHcCCCcHHHHHHHHH-HHhcchHHHHhccCCcHhHHHHHHH
Q 001314 694 DPKEFLPYLQELESMPPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMK-KYAQLFPLGLKLITDPAKMEQVLEA 772 (1102)
Q Consensus 694 DPkEYLpfL~~L~~le~~~rr~~Id~~LkryekAl~hl~~~g~~~~deAie~~~-~~~~Ly~~AL~L~~d~~~~~~i~~~ 772 (1102)
|++....++++|.... ...-+.|...+|+|++|...|.+++. +++|++... .. +.|++|.+++... ....++-.
T Consensus 1036 D~~Rv~eyI~kLd~~d-~~eIA~Iai~lglyEEAf~IYkKa~~--~~~A~~VLie~i-~nldrAiE~Aerv-n~p~vWsq 1110 (1630)
T 1xi4_A 1036 DRTRVMEYINRLDNYD-APDIANIAISNELFEEAFAIFRKFDV--NTSAVQVLIEHI-GNLDRAYEFAERC-NEPAVWSQ 1110 (1630)
T ss_pred ChhhHHHHHHHhhhcc-HHHHHHHHHhCCCHHHHHHHHHHcCC--HHHHHHHHHHHH-hhHHHHHHHHHhc-CCHHHHHH
Confidence 8887788888887554 23357888899999999999999975 888766554 76 8999999998211 12677889
Q ss_pred HHHHHhcccChHHHHHHHHHcCCH---HHHHHHHHHcCCHHHHHHHH---hhcCCC----------------hHHHH---
Q 001314 773 WADHLSDVKCFEDAATTYFCCSSL---EKAMKAYRASGNWSGVLTVA---GLLKLG----------------KDEVA--- 827 (1102)
Q Consensus 773 yAd~L~~~~~~eeAa~~Y~~ag~~---ekAl~~y~~ag~W~~al~lA---~~l~~~----------------~~el~--- 827 (1102)
+|..+...++|++|...|++|+++ ..-..+|.+.|+|++|+..- +...-. -+++.
T Consensus 1111 LAKAql~~G~~kEAIdsYiKAdD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI 1190 (1630)
T 1xi4_A 1111 LAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFI 1190 (1630)
T ss_pred HHHHHHhCCCHHHHHHHHHhcCChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHH
Confidence 999999999999999999999864 44667788888888875433 211100 01111
Q ss_pred -----HHHHHHHHHHHHcCChHHHHHHHHHhcCCHHHHHHHHHHhcCHHHHHHHHHhcCChhh
Q 001314 828 -----KLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDL 885 (1102)
Q Consensus 828 -----~l~~~lA~~L~~~g~~~eAa~i~l~ylgD~e~AI~~y~~~~~W~eA~rLa~~h~~~dL 885 (1102)
.-+..+|+.|.+.|+|.+|...|.. ++++-.+..+|++.++|++|+..+.+-+.++-
T Consensus 1191 ~~~n~ad~~~iGd~le~eg~YeeA~~~Y~k-A~ny~rLA~tLvkLge~q~AIEaarKA~n~~a 1252 (1630)
T 1xi4_A 1191 NGPNNAHIQQVGDRCYDEKMYDAAKLLYNN-VSNFGRLASTLVHLGEYQAAVDGARKANSTRT 1252 (1630)
T ss_pred hCCCHHHHHHHHHHHHhcCCHHHHHHHHHh-hhHHHHHHHHHHHhCCHHHHHHHHHHhCCHHH
Confidence 1245699999999999999999855 99999999999999999999999988765543
No 4
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=98.67 E-value=2.1e-06 Score=110.86 Aligned_cols=161 Identities=14% Similarity=0.120 Sum_probs=116.4
Q ss_pred hchhHHHhhhcHHHHHHHHHHcCCC-cHHHHHHHHHHHhcchHHHHhcc-----C--C----------------cHhHH-
Q 001314 713 MRYTIDLRLQRFENALKHIVSMGDS-YHADCLNLMKKYAQLFPLGLKLI-----T--D----------------PAKME- 767 (1102)
Q Consensus 713 rr~~Id~~LkryekAl~hl~~~g~~-~~deAie~~~~~~~Ly~~AL~L~-----~--d----------------~~~~~- 767 (1102)
+.+..-.-.|+|++|+..|.++++. .+.+..+...+. +.|+.|++.+ . + .+.+.
T Consensus 1110 qLAKAql~~G~~kEAIdsYiKAdD~say~eVa~~~~~l-GkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~ 1188 (1630)
T 1xi4_A 1110 QLAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANTS-GNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEE 1188 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHHhcCChHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHH
Confidence 3345555689999999999998651 123344444554 5555555544 0 0 01111
Q ss_pred -------HHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHc
Q 001314 768 -------QVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQAL 840 (1102)
Q Consensus 768 -------~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~ 840 (1102)
.-+..+|+++++.++|++|..+|.+|++|.++..+|.+.|++++|+..+++-+ +.+ .-...+..+.+.
T Consensus 1189 fI~~~n~ad~~~iGd~le~eg~YeeA~~~Y~kA~ny~rLA~tLvkLge~q~AIEaarKA~-n~~----aWkev~~acve~ 1263 (1630)
T 1xi4_A 1189 FINGPNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKAN-STR----TWKEVCFACVDG 1263 (1630)
T ss_pred HHhCCCHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHHHHHHHHHHhCCHHHHHHHHHHhC-CHH----HHHHHHHHHhhh
Confidence 12446999999999999999999999999999999999999999999998763 332 334455566678
Q ss_pred CChHHHHHHHHHh---cCCHHHHHHHHHHhcCHHHHHHHHHh
Q 001314 841 GKPGEAAKIALDY---CGDVTNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 841 g~~~eAa~i~l~y---lgD~e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
|+|..|-.+.+.- .+..++++..|-+.+.|+||+++...
T Consensus 1264 ~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~ 1305 (1630)
T 1xi4_A 1264 KEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEA 1305 (1630)
T ss_pred hHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 8898888776441 24567899999999999999998854
No 5
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.55 E-value=4e-05 Score=85.10 Aligned_cols=210 Identities=14% Similarity=0.175 Sum_probs=129.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCc---ceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGL---ERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGL---rhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.|++||+.. .+..|.+|+-++- ....|. . ....|..++|++|++.|+... ....|.+|.
T Consensus 13 ~~~~s~~~~~l~~~~------~d~~v~i~~~~~~~~~~~~~~~--~-h~~~v~~~~~~~~~~~l~~~~---~dg~i~vwd 80 (372)
T 1k8k_C 13 CHAWNKDRTQIAICP------NNHEVHIYEKSGNKWVQVHELK--E-HNGQVTGVDWAPDSNRIVTCG---TDRNAYVWT 80 (372)
T ss_dssp EEEECTTSSEEEEEC------SSSEEEEEEEETTEEEEEEEEE--C-CSSCEEEEEEETTTTEEEEEE---TTSCEEEEE
T ss_pred EEEECCCCCEEEEEe------CCCEEEEEeCCCCcEEeeeeec--C-CCCcccEEEEeCCCCEEEEEc---CCCeEEEEE
Confidence 689999999999975 3568999987654 333332 2 234699999999999999875 234799999
Q ss_pred cccceEEEEEEEEecc-CCC-ceEEecCCCCceEEEEeeCCcEEEEEEEE----eee---------------ec-CCcEE
Q 001314 81 FSNNHWYLKYEIRYLR-RDG-IRFMWHPTKPLQLICWTLDGQITTYNFIW----TTA---------------VM-ENSTA 138 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~-~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w----~~~---------------~~-d~~~v 138 (1102)
..+..| +..+.+.. ... .++.|+|.... |++++.+|.+.++++.- ... .+ +...+
T Consensus 81 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 81 LKGRTW--KPTLVILRINRAARCVRWAPNEKK-FAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp EETTEE--EEEEECCCCSSCEEEEEECTTSSE-EEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEE
T ss_pred CCCCee--eeeEEeecCCCceeEEEECCCCCE-EEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEE
Confidence 988875 33333222 223 45899998765 88878889888877651 110 11 22233
Q ss_pred EEEe-CCeEEeccCCCCCC-------------CCccccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCC
Q 001314 139 LVID-GSKILVTPLSLSLM-------------PPPMYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPD 203 (1102)
Q Consensus 139 aVID-G~~l~lTp~r~a~V-------------PPPM~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~ 203 (1102)
++-. ..++.+-.++...+ |..-....+ .....|.+++|++++ +.+++...++.+.+|++....
T Consensus 158 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~ 235 (372)
T 1k8k_C 158 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG--SRVAWVSHDSTVCLADADKKM 235 (372)
T ss_dssp EEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS--SEEEEEETTTEEEEEEGGGTT
T ss_pred EEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC--CEEEEEeCCCEEEEEECCCCc
Confidence 3322 22355544432111 111111222 235579999998865 367777788999999985432
Q ss_pred ccccccCCceeeeeeccccccCceEEEEEecCceEEEEE
Q 001314 204 MLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 204 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~~ 242 (1102)
....+ ......+..++|..++.+++..
T Consensus 236 ~~~~~------------~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 236 AVATL------------ASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEEEE------------ECSSCCEEEEEEEETTEEEEEE
T ss_pred eeEEE------------ccCCCCeEEEEEecCCCEEEEE
Confidence 21111 1222357778888888777654
No 6
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.49 E-value=0.00011 Score=79.94 Aligned_cols=207 Identities=11% Similarity=0.059 Sum_probs=128.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce--eeeecCC-ccccceeeeeecCCCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER--SSFDINE-QIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh--geF~L~~-~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.|.+||+.. +..|.+|+-+.-.. .-..++. .....|..++|++|+..|++.. ....|.+|.
T Consensus 56 ~~~~~~~~~~l~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d 125 (337)
T 1gxr_A 56 AVTISNPTRHVYTGG-------KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGG---EASTLSIWD 125 (337)
T ss_dssp EEEECSSSSEEEEEC-------BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEE---SSSEEEEEE
T ss_pred EEEEecCCcEEEEcC-------CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEc---CCCcEEEEE
Confidence 689999999999975 35899998654321 1111111 1334699999999999999875 245799999
Q ss_pred cccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEEEE-----Eee----------eec-CCcEEEEEe-C
Q 001314 81 FSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYNFI-----WTT----------AVM-ENSTALVID-G 143 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~----------~~~-d~~~vaVID-G 143 (1102)
..+-.+-.+..+......-.++.|+|...+ |++++.+|.+.+++.. ... ..+ +...+++.. .
T Consensus 126 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 126 LAAPTPRIKAELTSSAPACYALAISPDSKV-CFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp CCCC--EEEEEEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCCcceeeecccCCCceEEEEECCCCCE-EEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC
Confidence 998876555544432211146899997665 7777888888876642 111 111 222333332 2
Q ss_pred CeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccc
Q 001314 144 SKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETA 223 (1102)
Q Consensus 144 ~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 223 (1102)
..|.+-.++... ....+..+.++.+++|++++ +.+++...++.+.+|++....... + ...
T Consensus 205 g~i~~~d~~~~~-----~~~~~~~~~~v~~~~~s~~~--~~l~~~~~~~~i~~~~~~~~~~~~-~------------~~~ 264 (337)
T 1gxr_A 205 NTVRSWDLREGR-----QLQQHDFTSQIFSLGYCPTG--EWLAVGMESSNVEVLHVNKPDKYQ-L------------HLH 264 (337)
T ss_dssp SEEEEEETTTTE-----EEEEEECSSCEEEEEECTTS--SEEEEEETTSCEEEEETTSSCEEE-E------------CCC
T ss_pred CcEEEEECCCCc-----eEeeecCCCceEEEEECCCC--CEEEEEcCCCcEEEEECCCCCeEE-E------------cCC
Confidence 345555555421 22334567889999998865 356666778999999986432110 0 122
Q ss_pred cCceEEEEEecCceEEEE
Q 001314 224 FGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 224 ~~~~~~~~w~~~~~ll~~ 241 (1102)
.+.+..+.|..++.+++.
T Consensus 265 ~~~v~~~~~~~~~~~l~~ 282 (337)
T 1gxr_A 265 ESCVLSLKFAYCGKWFVS 282 (337)
T ss_dssp SSCEEEEEECTTSSEEEE
T ss_pred ccceeEEEECCCCCEEEE
Confidence 345778888877766654
No 7
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.40 E-value=3.6e-05 Score=85.36 Aligned_cols=219 Identities=14% Similarity=0.086 Sum_probs=131.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCccee-eeecCCccccceeeeeecCC--CCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERS-SFDINEQIDSTVELLKWNCM--SDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhg-eF~L~~~~~~~v~~L~Wn~D--S~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.|++||+.. .+..|.+|.-++-... ...++. ....|..++|+++ +..|+... ....|.+|.
T Consensus 16 ~~~~s~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~---~dg~v~iwd 85 (379)
T 3jrp_A 16 DAVLDYYGKRLATCS------SDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCS---YDGKVLIWK 85 (379)
T ss_dssp EEEECSSSSEEEEEE------TTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEE---TTSCEEEEE
T ss_pred EEEEcCCCCEEEEEE------CCCcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCCEEEEec---cCCEEEEEE
Confidence 589999999999976 3567899986532211 122332 2346999999987 99999875 235799999
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCC-CceEEEEeeCCcEEEEEEEEe-----------------eeec--------
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTK-PLQLICWTLDGQITTYNFIWT-----------------TAVM-------- 133 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~-pl~L~i~t~~g~~~~~~~~w~-----------------~~~~-------- 133 (1102)
..+..|...+.+... ... .++.|+|.. ...|++++.+|.+.++++.-. +..+
T Consensus 86 ~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 86 EENGRWSQIAVHAVH-SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EETTEEEEEEEECCC-SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred cCCCceeEeeeecCC-CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 999987665555322 223 468999983 334788788888887765310 0011
Q ss_pred ------CCcEEEEE-eCCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCC-CceEEEEEeCCceEEEecCCCCc
Q 001314 134 ------ENSTALVI-DGSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSS-KNCLAAILSDGCLCVVDLPAPDM 204 (1102)
Q Consensus 134 ------d~~~vaVI-DG~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~-~~~~a~vl~~~~l~l~~~~~~~~ 204 (1102)
|...+++. ...+|.+-.++... ++......+. -..+|.+++|+++.. .+.+++...++.+.+|++.....
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCC-cceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence 22333332 22345665554321 1111111222 356799999998731 24677777899999999865322
Q ss_pred cccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 205 LEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 205 ~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
+.. . .........+.+..++|..++.++++
T Consensus 244 ~~~-----~--~~~~~~~~~~~v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 244 PWK-----K--TLLKEEKFPDVLWRASWSLSGNVLAL 273 (379)
T ss_dssp CCE-----E--EESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred cce-----e--eeeccccCCCcEEEEEEcCCCCEEEE
Confidence 100 0 00001113346778889877766654
No 8
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.35 E-value=0.00019 Score=80.48 Aligned_cols=220 Identities=16% Similarity=0.251 Sum_probs=123.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce-eeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+.+.-.. --.++++. ...|..++|++|+..||..- ....|.+|...
T Consensus 66 ~~~~sp~g~~l~s~s------~D~~v~iw~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~l~s~s---~D~~v~iwd~~ 135 (345)
T 3fm0_A 66 KVAWSPCGNYLASAS------FDATTCIWKKNQDDFECVTTLEGH-ENEVKSVAWAPSGNLLATCS---RDKSVWVWEVD 135 (345)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEEECCC-EEEEEEECCC-SSCEEEEEECTTSSEEEEEE---TTSCEEEEEEC
T ss_pred EEEECCCCCEEEEEE------CCCcEEEEEccCCCeEEEEEccCC-CCCceEEEEeCCCCEEEEEE---CCCeEEEEECC
Confidence 589999999999976 356888998664321 12234432 34699999999999999864 23479999986
Q ss_pred cce-EEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE---E--------------eeeec-CCcEEEEE-
Q 001314 83 NNH-WYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI---W--------------TTAVM-ENSTALVI- 141 (1102)
Q Consensus 83 NYH-WYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~---w--------------~~~~~-d~~~vaVI- 141 (1102)
+-. +...+.+. +.... .++.|+|...+ |+.++.+|.+.+++.. | .+..+ |...++..
T Consensus 136 ~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~-l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 136 EEDEYECVSVLN-SHTQDVKHVVWHPSQEL-LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp TTSCEEEEEEEC-CCCSCEEEEEECSSSSC-EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCeEEEEEec-CcCCCeEEEEECCCCCE-EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEe
Confidence 543 22222221 11223 35899998776 7887888888877653 1 11112 22233332
Q ss_pred eCCeEEeccCCCCCCCCcc----------cccccc--cCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCcccccc
Q 001314 142 DGSKILVTPLSLSLMPPPM----------YLFSLK--FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLE 209 (1102)
Q Consensus 142 DG~~l~lTp~r~a~VPPPM----------~~~~l~--~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~ 209 (1102)
+..+|++=..+...-+..+ +...+. -...|.+|+|++.+. .++....++++.+|.......+.
T Consensus 214 ~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~--~l~s~~~d~~i~vw~~~~~~~~~--- 288 (345)
T 3fm0_A 214 DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG--ALATACGDDAIRVFQEDPNSDPQ--- 288 (345)
T ss_dssp TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC--CEEEEETTSCEEEEEECTTSCTT---
T ss_pred CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC--EEEEEeCCCeEEEEEeCCCCCcc---
Confidence 2223443221111001111 111111 245688999988654 56777889999999875432221
Q ss_pred CCceeeeeeccccccCceEEEEEecCc-eEEE
Q 001314 210 GTEFVVEACISETAFGSVIHLIWLGSH-LLLS 240 (1102)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~w~~~~-~ll~ 240 (1102)
...+...........+.+..+.|..++ .+++
T Consensus 289 ~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~la 320 (345)
T 3fm0_A 289 QPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLA 320 (345)
T ss_dssp SCCEEEEEEETTSSSSCEEEEEECSSSTTEEE
T ss_pred eeeEEEEeeecccccCcEeEeEEeCCCceEEE
Confidence 011211111112233467778887654 3454
No 9
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=98.34 E-value=6.1e-06 Score=84.74 Aligned_cols=105 Identities=12% Similarity=0.046 Sum_probs=79.4
Q ss_pred HHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHh
Q 001314 774 ADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDY 853 (1102)
Q Consensus 774 Ad~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~y 853 (1102)
|+-+.+..+|+.=+......|+++-|.+||.++|++..+.-+....+ +. +-...+++.-...|++.-|..+++.
T Consensus 28 a~~l~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg-~~----e~L~kla~iA~~~g~~n~af~~~l~- 101 (177)
T 3mkq_B 28 AKKLNDSITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTG-DV----NKLSKMQNIAQTREDFGSMLLNTFY- 101 (177)
T ss_dssp HHHHCCHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHT-CH----HHHHHHHHHHHHTTCHHHHHHHHHH-
T ss_pred HHHhCCHHHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhC-CH----HHHHHHHHHHHHCccHHHHHHHHHH-
Confidence 34445556666666777777777777777777777777766654443 22 2344566666778999999999864
Q ss_pred cCCHHHHHHHHHHhcCHHHHHHHHHhcCChh
Q 001314 854 CGDVTNGISLLIDARDWEEALRVAFMHRRED 884 (1102)
Q Consensus 854 lgD~e~AI~~y~~~~~W~eA~rLa~~h~~~d 884 (1102)
+||++++|++|++.++|.+|...|..|...+
T Consensus 102 lGdv~~~i~lL~~~~r~~eA~~~A~t~g~~~ 132 (177)
T 3mkq_B 102 NNSTKERSSIFAEGGSLPLAYAVAKANGDEA 132 (177)
T ss_dssp HTCHHHHHHHHHHTTCHHHHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHHCCChHHHHHHHHHcCcHH
Confidence 9999999999999999999999999998655
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.34 E-value=9.8e-05 Score=83.48 Aligned_cols=189 Identities=14% Similarity=0.138 Sum_probs=103.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCC-ccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINE-QIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~-~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|.+||+.......-=+..|.+|+- .|.....+.... ..+..|..++|++|+.+|+.- . ...|+||..
T Consensus 47 ~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s---~-dg~v~lWd~ 122 (357)
T 4g56_B 47 AVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVAS---D-SGAVELWEI 122 (357)
T ss_dssp EEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEE---T-TSCEEEC--
T ss_pred EEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEE---C-CCEEEEeec
Confidence 6899999999999863210000235777753 333333332221 123359999999999988753 2 457999987
Q ss_pred ccceEEEEEEEEe-ccCCCc-eEEecCCCCceEEEEeeCCcEEEEEEE---------------Eeeeec-CC-cEEEE-E
Q 001314 82 SNNHWYLKYEIRY-LRRDGI-RFMWHPTKPLQLICWTLDGQITTYNFI---------------WTTAVM-EN-STALV-I 141 (1102)
Q Consensus 82 ~NYHWYLKqei~~-~~~~~~-~~~W~~e~pl~L~i~t~~g~~~~~~~~---------------w~~~~~-d~-~~vaV-I 141 (1102)
.+-.-........ +....+ ++.|+|...+ |+.+..+|.+.+++.. +.+..+ +. ..++. -
T Consensus 123 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~-l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 123 LEKESLLVNKFAKYEHDDIVKTLSVFSDGTQ-AVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp ------CCCCEEECCCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEE
T ss_pred cccceeEEEeeccCCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeec
Confidence 6543222222222 122333 5899997665 7777778888775532 111111 21 22222 2
Q ss_pred eCCeEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 142 DGSKILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 142 DG~~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
...+|++-.++.. -|...... .-+..+.+|+|++++. +.+++-..++.+.+|++..
T Consensus 202 ~dg~v~~wd~~~~---~~~~~~~~~~~~~~v~~v~~sp~~~-~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 202 EDGRILLWDTRKP---KPATRIDFCASDTIPTSVTWHPEKD-DTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp TTSCEEECCTTSS---SCBCBCCCTTCCSCEEEEEECTTST-TEEEEEESSSCEEEEESSC
T ss_pred cCCceEEEECCCC---ceeeeeeeccccccccchhhhhccc-ceEEEeecccceeEEECCC
Confidence 2234666655552 23322222 2355688999998654 3555557789999999754
No 11
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.33 E-value=0.00082 Score=73.90 Aligned_cols=204 Identities=13% Similarity=0.107 Sum_probs=125.8
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+ .+|-....| +. ....|..++|++|++.|+... ....|.+|...
T Consensus 37 ~~~~s~~~~~l~~~~------~dg~i~vwd~~~~~~~~~~--~~-h~~~v~~~~~~~~~~~l~s~~---~dg~i~iwd~~ 104 (369)
T 3zwl_B 37 QVKYNKEGDLLFSCS------KDSSASVWYSLNGERLGTL--DG-HTGTIWSIDVDCFTKYCVTGS---ADYSIKLWDVS 104 (369)
T ss_dssp EEEECTTSCEEEEEE------SSSCEEEEETTTCCEEEEE--CC-CSSCEEEEEECTTSSEEEEEE---TTTEEEEEETT
T ss_pred EEEEcCCCCEEEEEe------CCCEEEEEeCCCchhhhhh--hh-cCCcEEEEEEcCCCCEEEEEe---CCCeEEEEECC
Confidence 589999999999976 245788887 455544444 32 233699999999999998875 24579999988
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeC-----CcEEEEEEEEeee-------------------------
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLD-----GQITTYNFIWTTA------------------------- 131 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~-----g~~~~~~~~w~~~------------------------- 131 (1102)
+..- .+.+. .... .++.|+|.... |++++.+ |.+.+++..-...
T Consensus 105 ~~~~--~~~~~--~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 105 NGQC--VATWK--SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp TCCE--EEEEE--CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred CCcE--EEEee--cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 7652 23333 2333 46899998776 6666766 8888877653210
Q ss_pred ---ec-CCcEEEEEe-CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccc
Q 001314 132 ---VM-ENSTALVID-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLE 206 (1102)
Q Consensus 132 ---~~-d~~~vaVID-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~ 206 (1102)
.+ +...+++.. ...|.+-.++.. ..+..... ....+|.+++|++++ +.+++...++.+.+|++.......
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~-~~~~~v~~~~~~~~~--~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNN--YEYVDSID-LHEKSISDMQFSPDL--TYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTT--TEEEEEEE-CCSSCEEEEEECTTS--SEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCC--cEeEEEEe-cCCCceeEEEECCCC--CEEEEecCCceEEEEECCCCceee
Confidence 11 222333322 234555555431 11111111 135679999998864 356666778999999985432211
Q ss_pred cccCCceeeeeeccccccCceEEEEEecCceEEEEE
Q 001314 207 DLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 207 ~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~~ 242 (1102)
.+ .....+..+.|..++..+++.
T Consensus 255 ~~-------------~~~~~~~~~~~~~~~~~l~~~ 277 (369)
T 3zwl_B 255 KY-------------ETDCPLNTAVITPLKEFIILG 277 (369)
T ss_dssp EE-------------ECSSCEEEEEECSSSSEEEEE
T ss_pred ee-------------cCCCCceeEEecCCCceEEEe
Confidence 11 022346677887777666653
No 12
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.29 E-value=0.00033 Score=78.79 Aligned_cols=204 Identities=13% Similarity=0.167 Sum_probs=118.8
Q ss_pred ceeeccCCC-eEEEEeeccCCCCCCeEEEEec----C-Cc------ceeeeecCCc-------cccceeeeeecCCCCeE
Q 001314 4 VLEWMPSGA-NIAAVYDRKSENKCPSIVFYER----N-GL------ERSSFDINEQ-------IDSTVELLKWNCMSDLL 64 (1102)
Q Consensus 4 ~LsWrPsGn-lIA~~qr~~~~~~~~~VvFFER----N-GL------rhgeF~L~~~-------~~~~v~~L~Wn~DS~iL 64 (1102)
+++|.|.|. +||+.. .+..|.+|+- . |- ....+.-|.. ....|..++|++|+..|
T Consensus 50 ~~~~s~~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 50 SSTWNPLDESILAYGE------KNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp EEEECSSCTTEEEEEE------TBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred EEEECCCCCcEEEEec------CCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 689999999 999876 3468888876 3 33 2344444321 13369999999999999
Q ss_pred EEEEeeCCCCeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Eee--------
Q 001314 65 AAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTT-------- 130 (1102)
Q Consensus 65 Av~~~~~~~~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~-------- 130 (1102)
|+.. ....|.+|....-. ...+. ..... .++.|+|...+ |+.++.+|.+.+++.. ...
T Consensus 124 ~~~~---~dg~i~i~~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 124 VTGV---ENGELRLWNKTGAL---LNVLN-FHRAPIVSVKWNKDGTH-IISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp EEEE---TTSCEEEEETTSCE---EEEEC-CCCSCEEEEEECTTSSE-EEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred EEEe---CCCeEEEEeCCCCe---eeecc-CCCccEEEEEECCCCCE-EEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 9875 23479999844322 22222 11223 46899998776 7777778888776542 000
Q ss_pred -----------------eecCCcEEEE-EeCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCC
Q 001314 131 -----------------AVMENSTALV-IDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDG 192 (1102)
Q Consensus 131 -----------------~~~d~~~vaV-IDG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~ 192 (1102)
..+.++.+++ -....|.+-.++.. .|..... ....+|.+++|++++. .+++...++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~---~~~~~~~-~~~~~i~~~~~~~~~~--~l~~~~~d~ 269 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEK---TPTGKLI-GHHGPISVLEFNDTNK--LLLSASDDG 269 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCS---SCSEEEC-CCSSCEEEEEEETTTT--EEEEEETTS
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCC---ceeeeec-cCCCceEEEEECCCCC--EEEEEcCCC
Confidence 0111122222 12223444444432 2221111 2356789999998653 566667789
Q ss_pred ceEEEecCCCCccccccCCceeeeeeccccccCceEEEEEecCceEE
Q 001314 193 CLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLL 239 (1102)
Q Consensus 193 ~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll 239 (1102)
.+.+|++........+ ....+.+..+.|..++.++
T Consensus 270 ~i~i~d~~~~~~~~~~------------~~~~~~i~~~~~~~~~~l~ 304 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCF------------YGHSQSIVSASWVGDDKVI 304 (425)
T ss_dssp CEEEECSSSBSCSEEE------------CCCSSCEEEEEEETTTEEE
T ss_pred EEEEEECCCCccceEe------------cCCCccEEEEEECCCCEEE
Confidence 9999987543221111 1123467788898877433
No 13
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.28 E-value=0.0037 Score=74.10 Aligned_cols=201 Identities=13% Similarity=0.106 Sum_probs=122.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
+++|.|+|.+||+.. .+..|.+|+++|-....|. +. ...|..|+|++|+..||..- ....|.+|+...
T Consensus 21 ~~a~spdg~~las~~------~d~~v~iWd~~~~~~~~l~--gh-~~~V~~l~fspdg~~las~~---~d~~i~vWd~~~ 88 (577)
T 2ymu_A 21 GVAFSPDGQTIASAS------DDKTVKLWNRNGQLLQTLT--GH-SSSVWGVAFSPDGQTIASAS---DDKTVKLWNRNG 88 (577)
T ss_dssp EEEECTTSSCEEEEE------TTSEEEEECTTSCEEEEEE--CC-SSCEEEEEECTTSSEEEEEE---TTSCEEEEETTS
T ss_pred EEEECCCCCEEEEEe------CCCEEEEEECCCCEEEEEe--CC-CCCEEEEEECCCCCEEEEEe---CCCEEEEEECCC
Confidence 689999999999986 3568999999997665543 32 33699999999999999864 234799999765
Q ss_pred ceEEEEEEEEeccCCCc-eEEecCCCCceEEEEeeCCcEEEEEEEEe--------------eee-cCCcEE-EEEeCCeE
Q 001314 84 NHWYLKYEIRYLRRDGI-RFMWHPTKPLQLICWTLDGQITTYNFIWT--------------TAV-MENSTA-LVIDGSKI 146 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~~-~~~W~~e~pl~L~i~t~~g~~~~~~~~w~--------------~~~-~d~~~v-aVIDG~~l 146 (1102)
- +.+.+.- ....+ ++.|+|.... |+.+..+|.+...+.... ... .+...+ ..-+...+
T Consensus 89 ~---~~~~~~~-~~~~v~~~~~s~d~~~-l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 163 (577)
T 2ymu_A 89 Q---LLQTLTG-HSSSVRGVAFSPDGQT-IASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV 163 (577)
T ss_dssp C---EEEEECC-CSSCEEEEEECTTSSE-EEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE
T ss_pred C---EEEEEEC-CCCCEEEEEECCCCCE-EEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccce
Confidence 3 2343321 12233 5899998766 777677777665442211 111 122222 23334444
Q ss_pred EeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccCc
Q 001314 147 LVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGS 226 (1102)
Q Consensus 147 ~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 226 (1102)
.+..... +...........|..++|++++. .++....++.+.+|+.... ... . .....+.
T Consensus 164 ~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~v~~w~~~~~---------~~~---~-~~~~~~~ 223 (577)
T 2ymu_A 164 KLWNRNG-----QLLQTLTGHSSSVWGVAFSPDGQ--TIASASDDKTVKLWNRNGQ---------LLQ---T-LTGHSSS 223 (577)
T ss_dssp EEECTTS-----CEEEEEECCSSCEEEEEECTTSS--CEEEEETTSEEEEECTTSC---------EEE---E-EECCSSC
T ss_pred eccccce-----eeeeeccCCCcceeeeeecCCCC--EEEEEcCCCEEEEEeCCCc---------EEE---E-EecCCCC
Confidence 4443322 22222234466788999988653 5666677888999874311 010 0 0112345
Q ss_pred eEEEEEecCceEEEE
Q 001314 227 VIHLIWLGSHLLLSV 241 (1102)
Q Consensus 227 ~~~~~w~~~~~ll~~ 241 (1102)
+..++|..++..++.
T Consensus 224 v~~~~~s~dg~~l~~ 238 (577)
T 2ymu_A 224 VRGVAFSPDGQTIAS 238 (577)
T ss_dssp EEEEEECTTSSCEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 677777766655543
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.28 E-value=8.5e-05 Score=83.32 Aligned_cols=186 Identities=18% Similarity=0.243 Sum_probs=113.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceee--eecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSS--FDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhge--F~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|++||+.. .+..|.+|+-..-...+ ..+.. ....|..+.|++|+++||... ....|.+|..
T Consensus 110 ~v~~sp~~~~l~s~s------~D~~v~iwd~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s---~d~~i~~w~~ 179 (345)
T 3fm0_A 110 SVAWAPSGNLLATCS------RDKSVWVWEVDEEDEYECVSVLNS-HTQDVKHVVWHPSQELLASAS---YDDTVKLYRE 179 (345)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEEECTTSCEEEEEEECC-CCSCEEEEEECSSSSCEEEEE---TTSCEEEEEE
T ss_pred EEEEeCCCCEEEEEE------CCCeEEEEECCCCCCeEEEEEecC-cCCCeEEEEECCCCCEEEEEe---CCCcEEEEEe
Confidence 589999999999976 35688999854332221 12222 233699999999999999875 2347999999
Q ss_pred ccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------------------------------Ee
Q 001314 82 SNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------------------------------WT 129 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------------------------------w~ 129 (1102)
..-.|.....+.- .... .++.|+|...+ |+.+..+|.+.+.+.. |.
T Consensus 180 ~~~~~~~~~~~~~-h~~~v~~l~~sp~g~~-l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 257 (345)
T 3fm0_A 180 EEDDWVCCATLEG-HESTVWSLAFDPSGQR-LASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYD 257 (345)
T ss_dssp ETTEEEEEEEECC-CSSCEEEEEECTTSSE-EEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEE
T ss_pred cCCCEEEEEEecC-CCCceEEEEECCCCCE-EEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEE
Confidence 8888765555432 1223 35899997765 7887888888876531 11
Q ss_pred eee-cCCcEEEEE-eCCeEEeccCCCCCCC-Cccccccc----ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 130 TAV-MENSTALVI-DGSKILVTPLSLSLMP-PPMYLFSL----KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 130 ~~~-~d~~~vaVI-DG~~l~lTp~r~a~VP-PPM~~~~l----~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+.. .+.+.++.. ...++.+-......-| .|...... .-...|++|+|+|+.. ..++..-.|+++.+|+....
T Consensus 258 v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~-~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 258 IAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP-GLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp EEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSST-TEEEEEETTSCEEEEEECC-
T ss_pred EEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCc-eEEEEcCCCCcEEEEEecCC
Confidence 111 122233322 2233444433322111 12111111 2246799999998643 35666678999999998654
No 15
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.28 E-value=1.7e-06 Score=101.08 Aligned_cols=191 Identities=13% Similarity=0.108 Sum_probs=103.7
Q ss_pred hhcHHHHHHHHHHcCCCcHHHHHH-----HHHHHhcchHHHHhccCCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCC
Q 001314 721 LQRFENALKHIVSMGDSYHADCLN-----LMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSS 795 (1102)
Q Consensus 721 LkryekAl~hl~~~g~~~~deAie-----~~~~~~~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~ 795 (1102)
+|+|++|++.|..+-....+.+++ ++.+. +.|.++.+++..|.. ..+...|+.+.+.|+|++|..+|.++.+
T Consensus 74 ~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Kl-g~l~e~e~f~~~pn~--~a~~~IGd~~~~~g~yeeA~~~Y~~a~n 150 (449)
T 1b89_A 74 SGNWEELVKYLQMARKKARESYVETELIFALAKT-NRLAELEEFINGPNN--AHIQQVGDRCYDEKMYDAAKLLYNNVSN 150 (449)
T ss_dssp ------------------------------------CHHHHTTTTTCC------------------CTTTHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHh-CCHHHHHHHHcCCcH--HHHHHHHHHHHHcCCHHHHHHHHHHhhh
Confidence 899999999666553221223455 78888 899999999955533 3788899999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHh---cCCHHHHHHHHHHhcCHHH
Q 001314 796 LEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDY---CGDVTNGISLLIDARDWEE 872 (1102)
Q Consensus 796 ~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~y---lgD~e~AI~~y~~~~~W~e 872 (1102)
+.+-..|+.+.|+|++|+..+++.+ +. ..-...+..+...|++..|..+.+.- ..+.++++.+|-+.++|+|
T Consensus 151 ~~~LA~~L~~Lg~yq~AVea~~KA~-~~----~~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eE 225 (449)
T 1b89_A 151 FGRLASTLVHLGEYQAAVDGARKAN-ST----RTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEE 225 (449)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHT-CH----HHHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhccHHHHHHHHHHcC-Cc----hhHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHH
Confidence 9999999999999999999999885 43 23455566777899999997765442 2345578889999999999
Q ss_pred HHHHHHhcCChhhHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Q 001314 873 ALRVAFMHRREDLITKVKHASLECASSLIGE--YKEGLEKVGKYLTRYLAVR 922 (1102)
Q Consensus 873 A~rLa~~h~~~dL~etv~~a~l~~a~~~~~e--l~e~~~~~~k~~~RL~~lR 922 (1102)
|+.+..+--..| .-+-++..+-.-++.. -+.+.+-++.|.+|+..=+
T Consensus 226 ai~lLe~aL~le---~ah~~~ftel~il~~ky~p~k~~ehl~~~~~~ini~k 274 (449)
T 1b89_A 226 LITMLEAALGLE---RAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPK 274 (449)
T ss_dssp HHHHHHHHTTST---TCCHHHHHHHHHHHHTTCHHHHHHHHHHHSTTSCHHH
T ss_pred HHHHHHHHhCCc---HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCcH
Confidence 998877642211 1122222232333333 2455556666777765443
No 16
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.26 E-value=0.0002 Score=77.68 Aligned_cols=185 Identities=13% Similarity=0.199 Sum_probs=112.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc-eeee--ecCCccccceeeeeecC--CCCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE-RSSF--DINEQIDSTVELLKWNC--MSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr-hgeF--~L~~~~~~~v~~L~Wn~--DS~iLAv~~~~~~~~~vqL 78 (1102)
+++|.|.|++||+.. .+..|.+|+-+.-. ..++ .+.. ....|..++|++ |++.|+... ....|.+
T Consensus 16 ~~~~~~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~---~dg~v~v 85 (351)
T 3f3f_A 16 DVVYDFYGRHVATCS------SDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGRIIASAS---YDKTVKL 85 (351)
T ss_dssp EEEECSSSSEEEEEE------TTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEE---TTSCEEE
T ss_pred EEEEcCCCCEEEEee------CCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCCEEEEEc---CCCeEEE
Confidence 589999999999976 35689999866321 1111 1222 234699999999 699999875 2347999
Q ss_pred EEcccc-------eEEEEEEEEeccCCC-ceEEecCCC-CceEEEEeeCCcEEEEEEE-------Eee------------
Q 001314 79 CFFSNN-------HWYLKYEIRYLRRDG-IRFMWHPTK-PLQLICWTLDGQITTYNFI-------WTT------------ 130 (1102)
Q Consensus 79 Wt~~NY-------HWYLKqei~~~~~~~-~~~~W~~e~-pl~L~i~t~~g~~~~~~~~-------w~~------------ 130 (1102)
|....- .|-....+.. .... .++.|+|.. ...|+.++.+|.+.+++.. |..
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLND-SKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EecCCCcccccccCcceeeeecc-cCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 998653 3433333332 2233 458999983 2337777888888887642 110
Q ss_pred ---------ee-c---CCcEEEEEeCCeEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCCC--ceEEEEEeCCce
Q 001314 131 ---------AV-M---ENSTALVIDGSKILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSSK--NCLAAILSDGCL 194 (1102)
Q Consensus 131 ---------~~-~---d~~~vaVIDG~~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~~--~~~a~vl~~~~l 194 (1102)
.. + +...+++...+...+--.....-+.++ ..+ .-..+|.+++|++++.+ +.++....|+++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i 242 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA--AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRI 242 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEE--EECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeee--eecCCCCcceeEEEECCCCCCcceEEEEEcCCCeE
Confidence 00 0 134455544443333332222111112 122 23567999999997643 567777888999
Q ss_pred EEEecCC
Q 001314 195 CVVDLPA 201 (1102)
Q Consensus 195 ~l~~~~~ 201 (1102)
.+|++..
T Consensus 243 ~iwd~~~ 249 (351)
T 3f3f_A 243 RIFKITE 249 (351)
T ss_dssp EEEEEEE
T ss_pred EEEeCCC
Confidence 9998754
No 17
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.22 E-value=0.00026 Score=77.02 Aligned_cols=204 Identities=10% Similarity=0.041 Sum_probs=125.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce-eeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.|.|++|++.. .+..|.+|+-++.+. -...++. ....|..+.|++|+..|++.. ....|.+|...
T Consensus 102 ~~~~~~~~~~l~~~~------~d~~i~~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~---~dg~v~~~d~~ 171 (337)
T 1gxr_A 102 SCKLLPDGCTLIVGG------EASTLSIWDLAAPTPRIKAELTS-SAPACYALAISPDSKVCFSCC---SDGNIAVWDLH 171 (337)
T ss_dssp EEEECTTSSEEEEEE------SSSEEEEEECCCC--EEEEEEEC-SSSCEEEEEECTTSSEEEEEE---TTSCEEEEETT
T ss_pred EEEEcCCCCEEEEEc------CCCcEEEEECCCCCcceeeeccc-CCCceEEEEECCCCCEEEEEe---CCCcEEEEeCC
Confidence 589999999999876 356899998765432 2233332 233699999999999999875 24579999998
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------E-------eeee-cCCcEEEEEe-CCe
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------W-------TTAV-MENSTALVID-GSK 145 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w-------~~~~-~d~~~vaVID-G~~ 145 (1102)
+... ...+.. .... .++.|+|.... |++++.+|.+.+++.. + .+.. ++...+++.. ...
T Consensus 172 ~~~~--~~~~~~-~~~~i~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 172 NQTL--VRQFQG-HTDGASCIDISNDGTK-LWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp TTEE--EEEECC-CSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCce--eeeeec-ccCceEEEEECCCCCE-EEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCc
Confidence 7652 222221 1223 45899997655 7777778888776632 1 1112 2333444432 344
Q ss_pred EEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccC
Q 001314 146 ILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFG 225 (1102)
Q Consensus 146 l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 225 (1102)
|.+-.++.. .+. .....+.+|.+++|++++. .+++...++.+.+|++...... +. .....
T Consensus 248 i~~~~~~~~---~~~--~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~~~~~~~~~~~-------~~------~~~~~ 307 (337)
T 1gxr_A 248 VEVLHVNKP---DKY--QLHLHESCVLSLKFAYCGK--WFVSTGKDNLLNAWRTPYGASI-------FQ------SKESS 307 (337)
T ss_dssp EEEEETTSS---CEE--EECCCSSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCEE-------EE------EECSS
T ss_pred EEEEECCCC---CeE--EEcCCccceeEEEECCCCC--EEEEecCCCcEEEEECCCCeEE-------EE------ecCCC
Confidence 666555542 222 1223466899999988653 5666677899999998643221 00 01223
Q ss_pred ceEEEEEecCceEEEE
Q 001314 226 SVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 226 ~~~~~~w~~~~~ll~~ 241 (1102)
.+..+.|..++..+++
T Consensus 308 ~v~~~~~s~~~~~l~~ 323 (337)
T 1gxr_A 308 SVLSCDISVDDKYIVT 323 (337)
T ss_dssp CEEEEEECTTSCEEEE
T ss_pred cEEEEEECCCCCEEEE
Confidence 5677788777765554
No 18
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.00037 Score=78.33 Aligned_cols=204 Identities=10% Similarity=0.115 Sum_probs=127.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
+++|.|.|++||+.. .+..|.+|+.+|-....|.-. ...|..+.|++|+..|++.. ....|.+|...+
T Consensus 113 ~~~~s~~~~~l~~~~------~dg~i~i~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~---~d~~i~iwd~~~ 180 (425)
T 1r5m_A 113 CLAWSHDGNSIVTGV------ENGELRLWNKTGALLNVLNFH---RAPIVSVKWNKDGTHIISMD---VENVTILWNVIS 180 (425)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEETTSCEEEEECCC---CSCEEEEEECTTSSEEEEEE---TTCCEEEEETTT
T ss_pred EEEEcCCCCEEEEEe------CCCeEEEEeCCCCeeeeccCC---CccEEEEEECCCCCEEEEEe---cCCeEEEEECCC
Confidence 589999999999976 346899999888776665432 34699999999999998764 245799999987
Q ss_pred ceEEEEEEEEeccCC---------------CceEEecCCCCceEEEEeeCCcEEEEEEE-------E--------eeeec
Q 001314 84 NHWYLKYEIRYLRRD---------------GIRFMWHPTKPLQLICWTLDGQITTYNFI-------W--------TTAVM 133 (1102)
Q Consensus 84 YHWYLKqei~~~~~~---------------~~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w--------~~~~~ 133 (1102)
... .+.+...... ..++.|++.. .+++++.+|.+.+++.. + .+..+
T Consensus 181 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~ 256 (425)
T 1r5m_A 181 GTV--MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFN 256 (425)
T ss_dssp TEE--EEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEE
T ss_pred CcE--EEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEEC
Confidence 652 2333322221 2357898863 36777888888776632 1 11111
Q ss_pred -CCcEEEEEe-CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCC
Q 001314 134 -ENSTALVID-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGT 211 (1102)
Q Consensus 134 -d~~~vaVID-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~ 211 (1102)
+...+++.. ...|.+-.++... ++... -.....|.+++|++++ .+++...++.+.+|++........+
T Consensus 257 ~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~-~~~~~~i~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~--- 326 (425)
T 1r5m_A 257 DTNKLLLSASDDGTLRIWHGGNGN---SQNCF-YGHSQSIVSASWVGDD---KVISCSMDGSVRLWSLKQNTLLALS--- 326 (425)
T ss_dssp TTTTEEEEEETTSCEEEECSSSBS---CSEEE-CCCSSCEEEEEEETTT---EEEEEETTSEEEEEETTTTEEEEEE---
T ss_pred CCCCEEEEEcCCCEEEEEECCCCc---cceEe-cCCCccEEEEEECCCC---EEEEEeCCCcEEEEECCCCcEeEec---
Confidence 233444332 3346665555432 11111 1245679999999865 6677788999999998542211100
Q ss_pred ceeeeeeccccccCceEEEEEecCceEEEEE
Q 001314 212 EFVVEACISETAFGSVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~~ 242 (1102)
......+..++|..++.++++.
T Consensus 327 ---------~~~~~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 327 ---------IVDGVPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp ---------ECTTCCEEEEEECTTSSEEEEE
T ss_pred ---------ccCCccEEEEEEcCCCCEEEEE
Confidence 1122356777888777666653
No 19
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.16 E-value=2.9e-05 Score=86.98 Aligned_cols=217 Identities=11% Similarity=0.096 Sum_probs=121.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc-eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE-RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr-hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+-++-. .-...+++ ....|..++|++|++.||..- ....|.+|...
T Consensus 16 ~~~~s~~g~~l~~~~------~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s---~d~~v~vwd~~ 85 (377)
T 3dwl_C 16 EHAFNSQRTEFVTTT------ATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRIVTCS---QDRNAYVYEKR 85 (377)
T ss_dssp CCEECSSSSEEECCC------SSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCEEEEE---TTSSEEEC---
T ss_pred EEEECCCCCEEEEec------CCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEEEEEe---CCCeEEEEEcC
Confidence 689999999999865 24578888876532 11222332 234699999999999999875 23479999988
Q ss_pred cce-EEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEe-------------------eeec-CCcEEEE
Q 001314 83 NNH-WYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWT-------------------TAVM-ENSTALV 140 (1102)
Q Consensus 83 NYH-WYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~-------------------~~~~-d~~~vaV 140 (1102)
+-. |-....+. +.... .++.|+|.... |+.++.+|.+.++++.-. +..+ +...+++
T Consensus 86 ~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 86 PDGTWKQTLVLL-RLNRAATFVRWSPNEDK-FAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp ---CCCCEEECC-CCSSCEEEEECCTTSSC-CEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred CCCceeeeeEec-ccCCceEEEEECCCCCE-EEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 765 43222221 11223 45899997655 777787888776554311 1111 2223333
Q ss_pred E-eCCeEEeccCCCCC-----CCCc--------ccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccc
Q 001314 141 I-DGSKILVTPLSLSL-----MPPP--------MYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLE 206 (1102)
Q Consensus 141 I-DG~~l~lTp~r~a~-----VPPP--------M~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~ 206 (1102)
. ...+|.+-.++..- .|.| -....+.-...|.+++|++++. .++....++++.+|++.....+.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGN--ALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSS--CEEEEETTTEEC-CEECSTTSCE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCC--EEEEEeCCCcEEEEECCCCCCcc
Confidence 2 22335555443111 0111 1111224466799999998754 56776788999999986543210
Q ss_pred cccCCceeeeeeccccccCceEEEEEecCceEEEEE
Q 001314 207 DLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 207 ~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~~ 242 (1102)
..- .......+.+..+.|..++.+++..
T Consensus 242 ~~~--------~~~~~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 242 RAL--------ITVKLSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp EEC--------CCEECSSSCEEEEEEEETTEEEEEE
T ss_pred eee--------EeecCCCCceEEEEEcCCCCEEEEE
Confidence 000 0011223457788998888877654
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.15 E-value=0.00045 Score=75.76 Aligned_cols=207 Identities=14% Similarity=0.180 Sum_probs=126.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|.+||+.. .+..|.+|+-. |.....|... +..|..+.|++|+..|+..- ....|.+|...
T Consensus 18 ~~~fsp~~~~l~s~~------~dg~v~lWd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~s---~d~~i~vwd~~ 85 (304)
T 2ynn_A 18 GIDFHPTEPWVLTTL------YSGRVELWNYETQVEVRSIQVT---ETPVRAGKFIARKNWIIVGS---DDFRIRVFNYN 85 (304)
T ss_dssp EEEECSSSSEEEEEE------TTSEEEEEETTTTEEEEEEECC---SSCEEEEEEEGGGTEEEEEE---TTSEEEEEETT
T ss_pred EEEECCCCCEEEEEc------CCCcEEEEECCCCceeEEeecc---CCcEEEEEEeCCCCEEEEEC---CCCEEEEEECC
Confidence 589999999999987 35689999854 4333333322 33699999999999999864 24589999988
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE----------------Eeeeec--CCcEEEE-Ee
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI----------------WTTAVM--ENSTALV-ID 142 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~----------------w~~~~~--d~~~vaV-ID 142 (1102)
+..- ...+. +..+. .++.|+|..++ |+.+..+|.+.++++. ..+..+ +...++. -.
T Consensus 86 ~~~~--~~~~~-~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 86 TGEK--VVDFE-AHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp TCCE--EEEEE-CCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred CCcE--EEEEe-CCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 7651 12222 12233 35899999887 7777778888776532 011111 2223332 22
Q ss_pred CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeecccc
Q 001314 143 GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISET 222 (1102)
Q Consensus 143 G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (1102)
..+|++=.++.. .|.......-...+..++|++.+....++....++++.+|++........+ ..
T Consensus 162 D~~v~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~------------~~ 226 (304)
T 2ynn_A 162 DRTVKVWSLGQS---TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATL------------EG 226 (304)
T ss_dssp TSEEEEEETTCS---SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEE------------EC
T ss_pred CCeEEEEECCCC---CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceee------------CC
Confidence 335666666542 222222223345788899988665567777788999999997543221111 11
Q ss_pred ccCceEEEEEecCceEEEE
Q 001314 223 AFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 223 ~~~~~~~~~w~~~~~ll~~ 241 (1102)
..+.+..+.|..++.+++.
T Consensus 227 h~~~v~~~~~~p~~~~l~s 245 (304)
T 2ynn_A 227 HMSNVSFAVFHPTLPIIIS 245 (304)
T ss_dssp CSSCEEEEEECSSSSEEEE
T ss_pred CCCCEEEEEECCCCCEEEE
Confidence 2234566677766655543
No 21
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00018 Score=80.16 Aligned_cols=158 Identities=16% Similarity=0.207 Sum_probs=95.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceee------eecCCccccceeeeeecCCCCeEEEEEeeCCCCeEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSS------FDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVK 77 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhge------F~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vq 77 (1102)
+++|.|.|++||+.. .+..|.+|+..+-..+. ..+.+ ....|..++|++|+..||..- ....|.
T Consensus 63 ~v~~sp~~~~las~s------~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~~las~s---~D~~v~ 132 (330)
T 2hes_X 63 SVAWRPHTSLLAAGS------FDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGYYLATCS---RDKSVW 132 (330)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSCEEEEEE---TTSCEE
T ss_pred EEEECCCCCEEEEEe------CCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCCEEEEEe---CCCEEE
Confidence 589999999999976 35689999875422211 12232 233699999999999999764 234799
Q ss_pred EEEccc--ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCC
Q 001314 78 ICFFSN--NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLS 154 (1102)
Q Consensus 78 LWt~~N--YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a 154 (1102)
+|...+ ..|-+.+.+. +.... .++.|+|...+ |+.+..+|.+.+ |+....+...+.++.|
T Consensus 133 iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~-l~s~s~D~~i~i----W~~~~~~~~~~~~~~~----------- 195 (330)
T 2hes_X 133 IWETDESGEEYECISVLQ-EHSQDVKHVIWHPSEAL-LASSSYDDTVRI----WKDYDDDWECVAVLNG----------- 195 (330)
T ss_dssp EEECCTTCCCCEEEEEEC-CCSSCEEEEEECSSSSE-EEEEETTSCEEE----EEEETTEEEEEEEECC-----------
T ss_pred EEeccCCCCCeEEEEEec-cCCCceEEEEECCCCCE-EEEEcCCCeEEE----EECCCCCeeEEEEccC-----------
Confidence 999832 2332222222 11223 35899997665 777677777765 4322110011111111
Q ss_pred CCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 155 LMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 155 ~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
-...|.+++|+++.....++.-..|+++.+|++.
T Consensus 196 ------------h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~ 229 (330)
T 2hes_X 196 ------------HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYM 229 (330)
T ss_dssp ------------CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEE
T ss_pred ------------CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEec
Confidence 2356889999987544456666788999999874
No 22
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.13 E-value=0.00013 Score=82.87 Aligned_cols=160 Identities=12% Similarity=0.035 Sum_probs=108.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCC-CCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEE-YDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~-~~~vqLWt~~ 82 (1102)
.++|.|.|++||+.. ++..++++...|-......... ....|..++|++|+..|+....... .-.|.+|...
T Consensus 181 ~v~fspdg~~l~s~s------~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~ 253 (365)
T 4h5i_A 181 DLHFSTDGKVVAYIT------GSSLEVISTVTGSCIARKTDFD-KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK 253 (365)
T ss_dssp EEEECTTSSEEEEEC------SSCEEEEETTTCCEEEEECCCC-TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred EEEEccCCceEEecc------ceeEEEEEeccCcceeeeecCC-CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc
Confidence 589999999999976 3457778888887665554443 2346899999999999998763222 2268899988
Q ss_pred cceEEEEEEEEeccCC-C-ceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCCCcc
Q 001314 83 NNHWYLKYEIRYLRRD-G-IRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPPPM 160 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~-~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPPPM 160 (1102)
+..+-..+...+.... . .++.|+|...+ |+.++.+|.+.+ |++. . | +++.|.++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~-lasgs~D~~V~i----wd~~---~-------~-~~~~~~~~g------- 310 (365)
T 4h5i_A 254 SGNTSVLRSKQVTNRFKGITSMDVDMKGEL-AVLASNDNSIAL----VKLK---D-------L-SMSKIFKQA------- 310 (365)
T ss_dssp TTEEEEEEEEEEESSCSCEEEEEECTTSCE-EEEEETTSCEEE----EETT---T-------T-EEEEEETTS-------
T ss_pred cceecceeeeeecCCCCCeEeEEECCCCCc-eEEEcCCCEEEE----EECC---C-------C-cEEEEecCc-------
Confidence 8877665555544433 3 36899997765 777666565544 3321 0 1 122222221
Q ss_pred cccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 161 YLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 161 ~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
-..+|.+|+|+|++. .|+..-.|+++.+|++|.
T Consensus 311 ------H~~~V~~v~fSpdg~--~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 311 ------HSFAITEVTISPDST--YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ------SSSCEEEEEECTTSC--EEEEEETTSEEEEEECCT
T ss_pred ------ccCCEEEEEECCCCC--EEEEEeCCCeEEEEEcCC
Confidence 245799999999764 577778899999999864
No 23
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.13 E-value=6.4e-05 Score=84.20 Aligned_cols=182 Identities=14% Similarity=0.297 Sum_probs=111.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc--eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE--RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr--hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|++||+.. .+..|.+|+-..-. .....+.. ....|..++|++|+..|+.... ...|.+|..
T Consensus 60 ~~~~s~~~~~l~s~s------~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~ 129 (377)
T 3dwl_C 60 CVDWAPKSNRIVTCS------QDRNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNEDKFAVGSG---ARVISVCYF 129 (377)
T ss_dssp EEEECTTTCCEEEEE------TTSSEEEC------CCCCEEECCC-CSSCEEEEECCTTSSCCEEEES---SSCEEECCC
T ss_pred EEEEeCCCCEEEEEe------CCCeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCCEEEEEec---CCeEEEEEE
Confidence 589999999999976 34578888865533 11122222 2346999999999999998752 347999998
Q ss_pred ccce-EEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE--------------------------------
Q 001314 82 SNNH-WYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------------------------------- 127 (1102)
Q Consensus 82 ~NYH-WYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------------------------------- 127 (1102)
.... |.+.+.+.-+.... .++.|+|...+ |+.++.+|.+.+++..
T Consensus 130 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 208 (377)
T 3dwl_C 130 EQENDWWVSKHLKRPLRSTILSLDWHPNNVL-LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWV 208 (377)
T ss_dssp -----CCCCEEECSSCCSCEEEEEECTTSSE-EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSE
T ss_pred CCcccceeeeEeecccCCCeEEEEEcCCCCE-EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceE
Confidence 7764 55555554323334 46999997655 8888888999888762
Q ss_pred Eeeeec-CCcEEEEEe-CCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 128 WTTAVM-ENSTALVID-GSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 128 w~~~~~-d~~~vaVID-G~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
..+..+ |...+++.. ..+|.+-.++....|| .....+. -..+|.+++|++++. +.+.-+++.+.+|...
T Consensus 209 ~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~---~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP-RALITVKLSQLPLRSLLWANESA---IVAAGYNYSPILLQGN 280 (377)
T ss_dssp EEEEECTTSSCEEEEETTTEEC-CEECSTTSCE-EECCCEECSSSCEEEEEEEETTE---EEEEESSSSEEEECCC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc-eeeEeecCCCCceEEEEEcCCCC---EEEEEcCCcEEEEEeC
Confidence 122222 333444433 3467777777665433 2233333 345799999998752 3455677777788764
No 24
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.12 E-value=6.5e-05 Score=90.58 Aligned_cols=181 Identities=13% Similarity=0.174 Sum_probs=112.3
Q ss_pred CceeeccCCCeEEEEeecc-------------CCCCCCeEEEEecCCcceeeeecCC---------ccccceeeeeecCC
Q 001314 3 AVLEWMPSGANIAAVYDRK-------------SENKCPSIVFYERNGLERSSFDINE---------QIDSTVELLKWNCM 60 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~-------------~~~~~~~VvFFERNGLrhgeF~L~~---------~~~~~v~~L~Wn~D 60 (1102)
.+++|.|.|.+||++..-. +.+.-..|.| -++| +.+.|.+.. +.+..|..++||+|
T Consensus 19 ~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~F-sPdg-~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPd 96 (588)
T 2j04_A 19 NNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKE-FPLE-FENKLDFELAQQNGLLNSQPVCYPRVCKPSPI 96 (588)
T ss_dssp CCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEE-ECCC-CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSS
T ss_pred EEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEE-CCCC-CcceEEEEeCCCceEeecCCCCcEEEEEECCC
Confidence 4799999999999975211 0000113444 3455 344443331 11345999999999
Q ss_pred CCeEEEEEeeCCCCeEEEEEcccceEEEEEEEEeccC----CC-ceEEecCCCCceEEEEeeCCcEEEEE----------
Q 001314 61 SDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRR----DG-IRFMWHPTKPLQLICWTLDGQITTYN---------- 125 (1102)
Q Consensus 61 S~iLAv~~~~~~~~~vqLWt~~NYHWYLKqei~~~~~----~~-~~~~W~~e~pl~L~i~t~~g~~~~~~---------- 125 (1102)
|..||+.. ....|++|...+ -|.+ +. ... .+ .++.|+|...+ |++++.+|.+.+++
T Consensus 97 G~~LAs~s---~dg~V~iwd~~~---~l~~-l~-~~~~~~~~sv~svafSPDG~~-LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 97 DDWMAVLS---NNGNVSVFKDNK---MLTN-LD-SKGNLSSRTYHCFEWNPIESS-IVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp SSCEEEEE---TTSCEEEEETTE---EEEE-CC-CSSCSTTTCEEEEEECSSSSC-EEEEETTSEEEEEECCCCTTTCCC
T ss_pred CCEEEEEe---CCCcEEEEeCCc---eeee-cc-CCCccccccEEEEEEcCCCCE-EEEEcCCCEEEEEECCCCcccccc
Confidence 99999876 244699999766 2222 22 111 12 35999998777 88888888887776
Q ss_pred ----------------EEEeeeecCCcEEEEEeCCeEEeccCCCCCCCCcccccccc--cCCceeEEEEecCCCCceEEE
Q 001314 126 ----------------FIWTTAVMENSTALVIDGSKILVTPLSLSLMPPPMYLFSLK--FPTAVTEMAFYSKSSKNCLAA 187 (1102)
Q Consensus 126 ----------------~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPPPM~~~~l~--~~~~i~~vaf~~~~~~~~~a~ 187 (1102)
+.+.++.+.+|.++.-.++++++=.+.....-.+ ...++ -...|.+|+|+ + +.++
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~--~~tL~~~h~~~V~svaFs-g---~~LA- 240 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPV--SRMIQNASRRKITDLKIV-D---YKVV- 240 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCC--EEEEECCCSSCCCCEEEE-T---TEEE-
T ss_pred ceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccc--eeeecccccCcEEEEEEE-C---CEEE-
Confidence 2233334455666667778888877766442100 01121 12469999998 2 3444
Q ss_pred EEeCCceEEEecCC
Q 001314 188 ILSDGCLCVVDLPA 201 (1102)
Q Consensus 188 vl~~~~l~l~~~~~ 201 (1102)
..+++++.+|+...
T Consensus 241 Sa~~~tIkLWd~~~ 254 (588)
T 2j04_A 241 LTCPGYVHKIDLKN 254 (588)
T ss_dssp EECSSEEEEEETTT
T ss_pred EEeCCeEEEEECCC
Confidence 45789999999753
No 25
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.12 E-value=0.002 Score=74.68 Aligned_cols=182 Identities=10% Similarity=0.031 Sum_probs=108.9
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCc---ceeeeecCCc-------------------------------
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGL---ERSSFDINEQ------------------------------- 47 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGL---rhgeF~L~~~------------------------------- 47 (1102)
.+++|.|.|++|+++. ...|..|. .+|- +.+.+.-+..
T Consensus 8 ~~v~~s~dg~~l~~~~-------~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (450)
T 2vdu_B 8 QNLLTSRDGSLVFAII-------KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNK 80 (450)
T ss_dssp CEEEECSSSSEEEEEE-------TTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred EEEEecCCCCEEEEEe-------CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCc
Confidence 4689999999888875 24788887 6777 5555543211
Q ss_pred --------------------cccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc--cceEEEEEEEEe-ccCCC-ceEE
Q 001314 48 --------------------IDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS--NNHWYLKYEIRY-LRRDG-IRFM 103 (1102)
Q Consensus 48 --------------------~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~--NYHWYLKqei~~-~~~~~-~~~~ 103 (1102)
....|..++|++|+..|++.. .....|++|... +.. ..+.+.. ..... .++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~--~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~ 156 (450)
T 2vdu_B 81 GDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACA--DSDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAIS 156 (450)
T ss_dssp -------------------CCCCCEEEEEECTTSSEEEEEE--GGGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEEE
T ss_pred CccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEE--CCCCeEEEEECcCCCCc--eeeeeecccCCCCceEEE
Confidence 001489999999999985543 234589999987 543 2233332 22233 4699
Q ss_pred ecCCCCceEEEEeeCCcEEEEEEE-------------------Eeeeec-C---CcEEEEEe-CCeEEeccCCCCCCCCc
Q 001314 104 WHPTKPLQLICWTLDGQITTYNFI-------------------WTTAVM-E---NSTALVID-GSKILVTPLSLSLMPPP 159 (1102)
Q Consensus 104 W~~e~pl~L~i~t~~g~~~~~~~~-------------------w~~~~~-d---~~~vaVID-G~~l~lTp~r~a~VPPP 159 (1102)
|+|.... |++++.+|.+..++.. +.+..+ | ...++.-+ ..+|.+-.++..- +
T Consensus 157 ~sp~~~~-l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~---~ 232 (450)
T 2vdu_B 157 IAEDDTT-VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF---I 232 (450)
T ss_dssp ECTTSSE-EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT---C
T ss_pred EcCCCCE-EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc---e
Confidence 9998765 7777777777555421 011111 2 22333322 2356655554321 1
Q ss_pred ccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 160 MYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 160 M~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+......-...|.+++|+ ++ ..++....++++.+|++...
T Consensus 233 ~~~~~~~h~~~v~~~~~s-d~--~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 233 VDKWLFGHKHFVSSICCG-KD--YLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp EEEECCCCSSCEEEEEEC-ST--TEEEEEESSSEEEEEETTTC
T ss_pred eeeeecCCCCceEEEEEC-CC--CEEEEEeCCCeEEEEECCCC
Confidence 111111235689999998 43 46676678899999998653
No 26
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.10 E-value=0.00029 Score=77.63 Aligned_cols=216 Identities=12% Similarity=0.037 Sum_probs=123.3
Q ss_pred ceeeccC----CCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecC-CCCeEEEEEeeCCCCeEE
Q 001314 4 VLEWMPS----GANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNC-MSDLLAAVVRFEEYDSVK 77 (1102)
Q Consensus 4 ~LsWrPs----GnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~-DS~iLAv~~~~~~~~~vq 77 (1102)
+++|.|. |++||+.. .+..|.+|+- +|-....|. . ....|..+.|++ |+.+|+... ....|.
T Consensus 74 ~~~~~~~~~~~~~~l~~~~------~dg~i~v~d~~~~~~~~~~~--~-~~~~i~~~~~~~~~~~~l~s~~---~dg~i~ 141 (366)
T 3k26_A 74 TCAWTYDSNTSHPLLAVAG------SRGIIRIINPITMQCIKHYV--G-HGNAINELKFHPRDPNLLLSVS---KDHALR 141 (366)
T ss_dssp EEEEEECTTTCCEEEEEEE------TTCEEEEECTTTCCEEEEEE--S-CCSCEEEEEECSSCTTEEEEEE---TTSCEE
T ss_pred EEEeccCCCCCCCEEEEec------CCCEEEEEEchhceEeeeec--C-CCCcEEEEEECCCCCCEEEEEe---CCCeEE
Confidence 5789998 77888876 3568999984 454444443 2 234699999999 999999875 244799
Q ss_pred EEEcccceEEEEEEEE--eccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEeee-----e-----------------
Q 001314 78 ICFFSNNHWYLKYEIR--YLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWTTA-----V----------------- 132 (1102)
Q Consensus 78 LWt~~NYHWYLKqei~--~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~-----~----------------- 132 (1102)
+|...+..- ...+. .+.... .++.|+|.... |+.++.+|.+.+++..-... .
T Consensus 142 iwd~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (366)
T 3k26_A 142 LWNIQTDTL--VAIFGGVEGHRDEVLSADYDLLGEK-IMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQK 218 (366)
T ss_dssp EEETTTTEE--EEEECSTTSCSSCEEEEEECTTSSE-EEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEE
T ss_pred EEEeecCeE--EEEecccccccCceeEEEECCCCCE-EEEecCCCCEEEEECCCCccccccceeEEecCCCCccccccee
Confidence 999987641 22221 112233 45999997655 77778889888866541000 0
Q ss_pred -----------cC---------CcEEEE-EeCCeEEeccCCCCCC-----CC----cccccccc-cCCceeEEEEecCCC
Q 001314 133 -----------ME---------NSTALV-IDGSKILVTPLSLSLM-----PP----PMYLFSLK-FPTAVTEMAFYSKSS 181 (1102)
Q Consensus 133 -----------~d---------~~~vaV-IDG~~l~lTp~r~a~V-----PP----PM~~~~l~-~~~~i~~vaf~~~~~ 181 (1102)
+. ...+++ -....|.+-.++.... .+ +-....+. -...|.+++|+++..
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 298 (366)
T 3k26_A 219 IHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFW 298 (366)
T ss_dssp ECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTT
T ss_pred eccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCC
Confidence 10 111111 1122233333322110 00 00111111 234688999999743
Q ss_pred CceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccc-cccCceEEEEEecCceEEEE
Q 001314 182 KNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISE-TAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 182 ~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~w~~~~~ll~~ 241 (1102)
.+.+++...++.+.+|++........ .. ..+.. ...+.+..++|..++.+++.
T Consensus 299 ~~~l~~~~~dg~i~vwd~~~~~~~~~----~~---~~~~~~~~~~~v~~~~~s~~~~~l~s 352 (366)
T 3k26_A 299 QKMLALGNQVGKLYVWDLEVEDPHKA----KC---TTLTHHKCGAAIRQTSFSRDSSILIA 352 (366)
T ss_dssp SSEEEEECTTSCEEEEECCSSSGGGC----EE---EEECCTTCCSCEEEEEECTTSSEEEE
T ss_pred CcEEEEEecCCcEEEEECCCCCCccc----cc---eEEcccccCCceEEEEeCCCCCeEEE
Confidence 45677777889999999865332110 00 00101 11356888899877766654
No 27
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.06 E-value=0.0026 Score=70.85 Aligned_cols=207 Identities=9% Similarity=0.089 Sum_probs=119.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+- +|..-..+... ...|..++|++|+..||..- ....|++|...
T Consensus 60 ~~~~s~d~~~l~s~s------~Dg~v~iWd~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~s~~---~d~~v~iw~~~ 127 (340)
T 1got_B 60 AMHWGTDSRLLLSAS------QDGKLIIWDSYTTNKVHAIPLR---SSWVMTCAYAPSGNYVACGG---LDNICSIYNLK 127 (340)
T ss_dssp EEEECTTSSEEEEEE------TTTEEEEEETTTCCEEEEEECS---SSCEEEEEECTTSSEEEEEE---TTCEEEEEETT
T ss_pred EEEECCCCCEEEEEe------CCCcEEEEECCCCCcceEeecC---CccEEEEEECCCCCEEEEEe---CCCeEEEEECc
Confidence 589999999999976 3568999984 44444444332 23589999999999999864 24589999986
Q ss_pred cce--EEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE---------------Eeeeec-CCcEEEE-Ee
Q 001314 83 NNH--WYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI---------------WTTAVM-ENSTALV-ID 142 (1102)
Q Consensus 83 NYH--WYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~---------------w~~~~~-d~~~vaV-ID 142 (1102)
+.. .-+..++. +.... .++.|++... |+.++.+|.+.+++.. +.+..+ +...++. -.
T Consensus 128 ~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 128 TREGNVRVSRELA-GHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp TCSBSCEEEEEEE-CCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCCcceeEEEec-CCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 542 11222222 11222 3467776542 5555666666654421 111111 2222222 22
Q ss_pred CCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccc
Q 001314 143 GSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISE 221 (1102)
Q Consensus 143 G~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~ 221 (1102)
..+|++=.++... +...+. -..+|.+|+|++++ +.++....|+++.+|++........+. ..
T Consensus 205 d~~v~~wd~~~~~-----~~~~~~~h~~~v~~v~~~p~~--~~l~s~s~d~~v~iwd~~~~~~~~~~~----------~~ 267 (340)
T 1got_B 205 DASAKLWDVREGM-----CRQTFTGHESDINAICFFPNG--NAFATGSDDATCRLFDLRADQELMTYS----------HD 267 (340)
T ss_dssp TSCEEEEETTTCS-----EEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEEEETTTTEEEEEEC----------CT
T ss_pred CCcEEEEECCCCe-----eEEEEcCCcCCEEEEEEcCCC--CEEEEEcCCCcEEEEECCCCcEEEEEc----------cC
Confidence 2345555554421 111222 35679999999865 467777889999999975422111000 01
Q ss_pred cccCceEEEEEecCceEEEEE
Q 001314 222 TAFGSVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 222 ~~~~~~~~~~w~~~~~ll~~~ 242 (1102)
.....+..+.|..++.+++..
T Consensus 268 ~~~~~v~~~~~s~~g~~l~~g 288 (340)
T 1got_B 268 NIICGITSVSFSKSGRLLLAG 288 (340)
T ss_dssp TCCSCEEEEEECTTSSEEEEE
T ss_pred CcccceEEEEECCCCCEEEEE
Confidence 122346777888777766653
No 28
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.05 E-value=0.00052 Score=76.27 Aligned_cols=202 Identities=15% Similarity=0.133 Sum_probs=125.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|.++|+.. .+..|.+|+ ++|.....|... ...+..++|++|+..||... ....|.+|...
T Consensus 85 ~~~~~~~~~~l~s~s------~D~~i~lWd~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~g~---~dg~v~i~~~~ 152 (321)
T 3ow8_A 85 SVDISHTLPIAASSS------LDAHIRLWDLENGKQIKSIDAG---PVDAWTLAFSPDSQYLATGT---HVGKVNIFGVE 152 (321)
T ss_dssp EEEECSSSSEEEEEE------TTSEEEEEETTTTEEEEEEECC---TTCCCCEEECTTSSEEEEEC---TTSEEEEEETT
T ss_pred EEEECCCCCEEEEEe------CCCcEEEEECCCCCEEEEEeCC---CccEEEEEECCCCCEEEEEc---CCCcEEEEEcC
Confidence 478999999999876 356899998 456555555432 23578899999999999864 34589999998
Q ss_pred cceEEEEEEEEeccCC-C-ceEEecCCCCceEEEEeeCCcEEEEEEE-------E--------eeeec-CCcEEEEEe-C
Q 001314 83 NNHWYLKYEIRYLRRD-G-IRFMWHPTKPLQLICWTLDGQITTYNFI-------W--------TTAVM-ENSTALVID-G 143 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~-~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w--------~~~~~-d~~~vaVID-G 143 (1102)
+.. ....+.... . .++.|+|...+ |+.++.+|.+.+++.. + .+..+ |...++.-. .
T Consensus 153 ~~~----~~~~~~~~~~~v~~~~~spdg~~-lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 153 SGK----KEYSLDTRGKFILSIAYSPDGKY-LASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp TCS----EEEEEECSSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTT
T ss_pred CCc----eeEEecCCCceEEEEEECCCCCE-EEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCC
Confidence 765 222222222 2 46899998776 7887888888776632 1 11112 223333322 2
Q ss_pred CeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeecccc
Q 001314 144 SKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISET 222 (1102)
Q Consensus 144 ~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (1102)
.+|++-.++..... ..+. -...|.+++|++++. .++..-.|+++.+|++........+ ..
T Consensus 228 g~i~iwd~~~~~~~-----~~~~~h~~~v~~~~~sp~~~--~l~s~s~D~~v~iwd~~~~~~~~~~------------~~ 288 (321)
T 3ow8_A 228 GYIKIYDVQHANLA-----GTLSGHASWVLNVAFCPDDT--HFVSSSSDKSVKVWDVGTRTCVHTF------------FD 288 (321)
T ss_dssp SCEEEEETTTCCEE-----EEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTTEEEEEE------------CC
T ss_pred CeEEEEECCCccee-----EEEcCCCCceEEEEECCCCC--EEEEEeCCCcEEEEeCCCCEEEEEE------------cC
Confidence 34666555543211 1121 345689999998653 5666678899999998643221111 11
Q ss_pred ccCceEEEEEecCceEEEE
Q 001314 223 AFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 223 ~~~~~~~~~w~~~~~ll~~ 241 (1102)
..+.+..++|..++..++.
T Consensus 289 h~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 289 HQDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp CSSCEEEEEECTTSSEEEE
T ss_pred CCCcEEEEEECCCCCEEEE
Confidence 2245777888877655543
No 29
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.05 E-value=0.00028 Score=77.66 Aligned_cols=181 Identities=13% Similarity=0.126 Sum_probs=112.3
Q ss_pred ceeeccC---CCeEEEEeeccCCCCCCeEEEEecC--CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPS---GANIAAVYDRKSENKCPSIVFYERN--GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPs---GnlIA~~qr~~~~~~~~~VvFFERN--GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqL 78 (1102)
+++|.|. |++||+.. .+..|.+|+-. |... ...+.. ....|..++|++|++.|+... ....|.+
T Consensus 44 ~~~~~~~~~~g~~l~~~~------~dg~i~iw~~~~~~~~~-~~~~~~-h~~~v~~~~~~~~~~~l~s~~---~dg~v~i 112 (368)
T 3mmy_A 44 CLSFSPPTLPGNFLIAGS------WANDVRCWEVQDSGQTI-PKAQQM-HTGPVLDVCWSDDGSKVFTAS---CDKTAKM 112 (368)
T ss_dssp EEEECCTTSSSEEEEEEE------TTSEEEEEEECTTSCEE-EEEEEE-CSSCEEEEEECTTSSEEEEEE---TTSEEEE
T ss_pred EEEEcCCCCCceEEEEEC------CCCcEEEEEcCCCCcee-EEEecc-ccCCEEEEEECcCCCEEEEEc---CCCcEEE
Confidence 5899998 79999976 35688898866 3332 122222 234699999999999999765 2458999
Q ss_pred EEcccceEEEEEEEEeccCCC-ceEEe--cCCCCceEEEEeeCCcEEEEEEE-----Ee---------eeecCCcEEEEE
Q 001314 79 CFFSNNHWYLKYEIRYLRRDG-IRFMW--HPTKPLQLICWTLDGQITTYNFI-----WT---------TAVMENSTALVI 141 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~-~~~~W--~~e~pl~L~i~t~~g~~~~~~~~-----w~---------~~~~d~~~vaVI 141 (1102)
|...+... .+ + ...... .++.| ++...+ |+.++.+|.+.+++.. .. .....+..++.-
T Consensus 113 wd~~~~~~--~~-~-~~~~~~v~~~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 113 WDLSSNQA--IQ-I-AQHDAPVKTIHWIKAPNYSC-VMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVAT 187 (368)
T ss_dssp EETTTTEE--EE-E-EECSSCEEEEEEEECSSCEE-EEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEE
T ss_pred EEcCCCCc--ee-e-ccccCceEEEEEEeCCCCCE-EEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEe
Confidence 99988762 12 1 222333 45899 565444 7777778888775532 00 001122233333
Q ss_pred eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCC--ceEEEEEeCCceEEEecCCC
Q 001314 142 DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSK--NCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 142 DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~--~~~a~vl~~~~l~l~~~~~~ 202 (1102)
.+..+.+-.++.. +.++..........+..+++...... +.+++...++.+.+|.+...
T Consensus 188 ~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 188 AERGLIVYQLENQ--PSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPP 248 (368)
T ss_dssp GGGCEEEEECSSS--CEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCS
T ss_pred CCCcEEEEEeccc--cchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCC
Confidence 3445555555543 44444444445566677777665432 34777788999999998654
No 30
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.04 E-value=0.00026 Score=81.90 Aligned_cols=183 Identities=13% Similarity=0.049 Sum_probs=108.2
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCc-ceeeeecCCccccceeeeeecC-CCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGL-ERSSFDINEQIDSTVELLKWNC-MSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGL-rhgeF~L~~~~~~~v~~L~Wn~-DS~iLAv~~~~~~~~~vqLWt 80 (1102)
+|+|.| .+++||+.. .+..|.+|+-+.- ...-+.+.++ ...|..|+|++ |+..|+..- ....|.+|+
T Consensus 124 ~l~~~P~~~~~lasGs------~dg~i~lWd~~~~~~~~~~~~~gH-~~~V~~l~f~p~~~~~l~s~s---~D~~v~iwd 193 (435)
T 4e54_B 124 SLAWHPTHPSTVAVGS------KGGDIMLWNFGIKDKPTFIKGIGA-GGSITGLKFNPLNTNQFYASS---MEGTTRLQD 193 (435)
T ss_dssp EEEECSSCTTCEEEEE------TTSCEEEECSSCCSCCEEECCCSS-SCCCCEEEECSSCTTEEEEEC---SSSCEEEEE
T ss_pred EEEEeCCCCCEEEEEe------CCCEEEEEECCCCCceeEEEccCC-CCCEEEEEEeCCCCCEEEEEe---CCCEEEEee
Confidence 689999 578998865 3568999975432 2223333332 34699999996 788888653 234799999
Q ss_pred cccceEEEEEEEEeccCCC---ceEEecCCCCceEEEEeeCCcEEEEEEE--------------Eeeeec-CC-cEEEEE
Q 001314 81 FSNNHWYLKYEIRYLRRDG---IRFMWHPTKPLQLICWTLDGQITTYNFI--------------WTTAVM-EN-STALVI 141 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~---~~~~W~~e~pl~L~i~t~~g~~~~~~~~--------------w~~~~~-d~-~~vaVI 141 (1102)
...-. .+.+....... .++.|+|...+ |+.++.+|.+.+++.. ..+..+ +. ..++.-
T Consensus 194 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 194 FKGNI---LRVFASSDTINIWFCSLDVSASSRM-VVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp TTSCE---EEEEECCSSCSCCCCCEEEETTTTE-EEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred ccCCc---eeEEeccCCCCccEEEEEECCCCCE-EEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEe
Confidence 86532 12222211111 35899997766 8888888888775532 001111 11 122221
Q ss_pred -eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCC
Q 001314 142 -DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPD 203 (1102)
Q Consensus 142 -DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~ 203 (1102)
...+|++-.++..-....+ .....-..+|.+|+|++++ +.|+....|+++.+|+....+
T Consensus 270 s~d~~v~iwd~~~~~~~~~~-~~~~~h~~~v~~~~~spdg--~~l~s~~~D~~i~iwd~~~~~ 329 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASF-LYSLPHRHPVNAACFSPDG--ARLLTTDQKSEIRVYSASQWD 329 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCC-SBCCBCSSCEEECCBCTTS--SEEEEEESSSCEEEEESSSSS
T ss_pred cCcceeeEEecccccccceE-EEeeeccccccceeECCCC--CeeEEEcCCCEEEEEECCCCc
Confidence 1233555445443222111 1122335679999998864 367777889999999986543
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.00027 Score=78.25 Aligned_cols=187 Identities=13% Similarity=0.132 Sum_probs=117.9
Q ss_pred ceeeccC--CCeEEEEeeccCCCCCCeEEEEecCCcce-eeeecCCccccceeeeeecCC--CCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPS--GANIAAVYDRKSENKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCM--SDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPs--GnlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~D--S~iLAv~~~~~~~~~vqL 78 (1102)
+++|.|. |++||+.. .+..|.+|+-+.-+. -...++. ....|..++|+++ +..|++.. ....|.+
T Consensus 60 ~~~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~---~d~~i~v 129 (379)
T 3jrp_A 60 RVDWAHPKFGTILASCS------YDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVAS---SDGKVSV 129 (379)
T ss_dssp EEEECCGGGCSEEEEEE------TTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEE---TTSEEEE
T ss_pred EEEeCCCCCCCEEEEec------cCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEec---CCCcEEE
Confidence 5899886 99999986 346788898665431 1122222 2346999999999 89999875 2458999
Q ss_pred EEcccceEEEEEEEEeccCCC-ceEEecCC------------CCceEEEEeeCCcEEEEEEE-----Ee-----------
Q 001314 79 CFFSNNHWYLKYEIRYLRRDG-IRFMWHPT------------KPLQLICWTLDGQITTYNFI-----WT----------- 129 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~-~~~~W~~e------------~pl~L~i~t~~g~~~~~~~~-----w~----------- 129 (1102)
|...+-....+..+.. .... .++.|+|. ++..|+.++.+|.+.+++.. |.
T Consensus 130 ~d~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~ 208 (379)
T 3jrp_A 130 VEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 208 (379)
T ss_dssp EECCTTSCCCEEEEEC-CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EecCCCCceeeEEecC-CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc
Confidence 9998874333333322 2233 46899995 45558888888999888764 11
Q ss_pred ---eeec-C---CcEEEEEeC-CeEEeccCCCCCCCCccc-ccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 130 ---TAVM-E---NSTALVIDG-SKILVTPLSLSLMPPPMY-LFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 130 ---~~~~-d---~~~vaVIDG-~~l~lTp~r~a~VPPPM~-~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
+..+ + ...+++... .+|.+-.++...-|.... ......+..|.+++|++++. .+++...+|.+.+|++.
T Consensus 209 v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 209 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN--VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC--CEEEEESSSSEEEEEEE
T ss_pred EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC--EEEEecCCCcEEEEeCC
Confidence 1112 3 234444332 246665555532221111 11223567899999998764 56776789999999986
Q ss_pred CCC
Q 001314 201 APD 203 (1102)
Q Consensus 201 ~~~ 203 (1102)
...
T Consensus 287 ~~~ 289 (379)
T 3jrp_A 287 LEG 289 (379)
T ss_dssp ETT
T ss_pred CCC
Confidence 433
No 32
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.0011 Score=74.69 Aligned_cols=206 Identities=13% Similarity=0.129 Sum_probs=113.5
Q ss_pred CceeeccCCC-eEEEEeeccC----CCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEE
Q 001314 3 AVLEWMPSGA-NIAAVYDRKS----ENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVK 77 (1102)
Q Consensus 3 ~~LsWrPsGn-lIA~~qr~~~----~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vq 77 (1102)
.+++|.|.|. ++|+...... ...+..|.+|+-+.....+..........|..++|++|+..||.... ...|+
T Consensus 16 ~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~v~ 92 (416)
T 2pm9_A 16 ATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALD---NGSLE 92 (416)
T ss_dssp CBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEES---SSCEE
T ss_pred ceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEcc---CCeEE
Confidence 3689999997 8888643210 01356899998765432211111112346999999999999998752 34799
Q ss_pred EEEcccc--eEEEEEEEEecc-CCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCC
Q 001314 78 ICFFSNN--HWYLKYEIRYLR-RDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSL 153 (1102)
Q Consensus 78 LWt~~NY--HWYLKqei~~~~-~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~ 153 (1102)
+|...+. .. +....+.. ... .++.|+|.....|+.++.+|.+.+ |+...... ....
T Consensus 93 vw~~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~i----wd~~~~~~-----------~~~~--- 152 (416)
T 2pm9_A 93 LYSTNEANNAI--NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFI----WDMNKCTE-----------SPSN--- 152 (416)
T ss_dssp EECCSSTTSCC--CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEB----CBTTTTSS-----------CTTT---
T ss_pred Eeecccccccc--cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEE----EECCCCcc-----------cccc---
Confidence 9999871 11 11122222 223 468999985554777666666543 33321100 0000
Q ss_pred CCCCCcccc-cccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccCceEEEEE
Q 001314 154 SLMPPPMYL-FSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIW 232 (1102)
Q Consensus 154 a~VPPPM~~-~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w 232 (1102)
..|... ........|.+++|++++. +.+++...++.+.+|++........+.... . .......+..+.|
T Consensus 153 ---~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----~-~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 153 ---YTPLTPGQSMSSVDEVISLAWNQSLA-HVFASAGSSNFASIWDLKAKKEVIHLSYTS-----P-NSGIKQQLSVVEW 222 (416)
T ss_dssp ---CCCBCCCCSCCSSCCCCEEEECSSCT-TEEEEESSSSCEEEEETTTTEEEEEECCCC-----C-SSCCCCCEEEEEE
T ss_pred ---ccccccccccCCCCCeeEEEeCCCCC-cEEEEEcCCCCEEEEECCCCCcceEEeccc-----c-ccccCCceEEEEE
Confidence 011111 1112356789999988643 356666788999999986532221111000 0 0000346778888
Q ss_pred ecCc-eEEEE
Q 001314 233 LGSH-LLLSV 241 (1102)
Q Consensus 233 ~~~~-~ll~~ 241 (1102)
..++ .++++
T Consensus 223 ~~~~~~~l~~ 232 (416)
T 2pm9_A 223 HPKNSTRVAT 232 (416)
T ss_dssp CSSCTTEEEE
T ss_pred CCCCCCEEEE
Confidence 8765 34444
No 33
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.03 E-value=0.0019 Score=70.51 Aligned_cols=208 Identities=11% Similarity=0.051 Sum_probs=115.9
Q ss_pred ceeeccC-CCeEEEEeeccCCCCCCeEEEEecCCcc--ee--eeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPS-GANIAAVYDRKSENKCPSIVFYERNGLE--RS--SFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPs-GnlIA~~qr~~~~~~~~~VvFFERNGLr--hg--eF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqL 78 (1102)
+++|.|. |++||+.. .+..|.+|+-+... .+ ..++++. ...|..+.|++|+..|+... ....|.+
T Consensus 43 ~v~~sp~~~~~l~S~s------~D~~i~vWd~~~~~~~~~~~~~~l~~h-~~~V~~~~~s~dg~~l~s~~---~d~~i~~ 112 (340)
T 4aow_A 43 QIATTPQFPDMILSAS------RDKTIIMWKLTRDETNYGIPQRALRGH-SHFVSDVVISSDGQFALSGS---WDGTLRL 112 (340)
T ss_dssp EEEECTTCTTEEEEEE------TTSCEEEEEECCSSSCSEEEEEEECCC-SSCEEEEEECTTSSEEEEEE---TTSEEEE
T ss_pred EEEEeCCCCCEEEEEc------CCCeEEEEECCCCCcccceeeEEEeCC-CCCEEEEEECCCCCEEEEEc---ccccceE
Confidence 5899996 78999876 35689999743321 11 1122221 33699999999999999865 2347999
Q ss_pred EEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEEEE----Ee------------eeec-C--CcEEE
Q 001314 79 CFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYNFI----WT------------TAVM-E--NSTAL 139 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~~~----w~------------~~~~-d--~~~va 139 (1102)
|........... ...........|++.... |+.++.+|.+.+++.. .. +..+ + ...++
T Consensus 113 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 189 (340)
T 4aow_A 113 WDLTTGTTTRRF--VGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIV 189 (340)
T ss_dssp EETTTTEEEEEE--ECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEE
T ss_pred Eeecccceeeee--cCCCCceeEEEEeecCcc-ceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEE
Confidence 998887632221 111111134677777665 6666666766654321 00 0000 0 11111
Q ss_pred EE-eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeee
Q 001314 140 VI-DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEAC 218 (1102)
Q Consensus 140 VI-DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~ 218 (1102)
.. ...+|++-.++... +.... ..-..+|.+|+|++++ +.++....|+++.+|++........+.
T Consensus 190 s~~~d~~i~i~d~~~~~---~~~~~-~~h~~~v~~~~~s~~~--~~l~s~s~Dg~i~iwd~~~~~~~~~~~--------- 254 (340)
T 4aow_A 190 SCGWDKLVKVWNLANCK---LKTNH-IGHTGYLNTVTVSPDG--SLCASGGKDGQAMLWDLNEGKHLYTLD--------- 254 (340)
T ss_dssp EEETTSCEEEEETTTTE---EEEEE-CCCSSCEEEEEECTTS--SEEEEEETTCEEEEEETTTTEEEEEEE---------
T ss_pred EEcCCCEEEEEECCCCc---eeeEe-cCCCCcEEEEEECCCC--CEEEEEeCCCeEEEEEeccCceeeeec---------
Confidence 11 12234444444321 11111 1235679999998864 356666788999999876432211111
Q ss_pred ccccccCceEEEEEecCceEEEEEe
Q 001314 219 ISETAFGSVIHLIWLGSHLLLSVSH 243 (1102)
Q Consensus 219 ~~~~~~~~~~~~~w~~~~~ll~~~~ 243 (1102)
....+..+.|..++.+++...
T Consensus 255 ----~~~~v~~~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 255 ----GGDIINALCFSPNRYWLCAAT 275 (340)
T ss_dssp ----CSSCEEEEEECSSSSEEEEEE
T ss_pred ----CCceEEeeecCCCCceeeccC
Confidence 112455667777777666543
No 34
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.01 E-value=6.2e-05 Score=85.12 Aligned_cols=179 Identities=17% Similarity=0.142 Sum_probs=109.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCC-eEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSD-LLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~-iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|++||+.. .+..|.+|+-+ |-....|... ...|..++|+++++ +|+..- ....|++|..
T Consensus 144 ~v~~spdg~~l~sgs------~dg~v~iwd~~~~~~~~~~~~h---~~~v~~v~~s~~~~~~~~s~~---~dg~v~~wd~ 211 (357)
T 4g56_B 144 TLSVFSDGTQAVSGG------KDFSVKVWDLSQKAVLKSYNAH---SSEVNCVAACPGKDTIFLSCG---EDGRILLWDT 211 (357)
T ss_dssp EEEECSSSSEEEEEE------TTSCEEEEETTTTEEEEEECCC---SSCEEEEEECTTCSSCEEEEE---TTSCEEECCT
T ss_pred EEEECCCCCEEEEEe------CCCeEEEEECCCCcEEEEEcCC---CCCEEEEEEccCCCceeeeec---cCCceEEEEC
Confidence 589999999999876 35689999854 4333444321 23699999999986 555443 2357999998
Q ss_pred ccceEEEEEEEEeccCCC--ceEEecCCCCceEEEEeeCCcEEEEEEE---------------Eeeeec-CCc-EEEEE-
Q 001314 82 SNNHWYLKYEIRYLRRDG--IRFMWHPTKPLQLICWTLDGQITTYNFI---------------WTTAVM-ENS-TALVI- 141 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~--~~~~W~~e~pl~L~i~t~~g~~~~~~~~---------------w~~~~~-d~~-~vaVI- 141 (1102)
.+..-. ..+.+..... .++.|+|.....|+.++.+|.+.+++.. +.+..+ +.+ .++..
T Consensus 212 ~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs 289 (357)
T 4g56_B 212 RKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASIS 289 (357)
T ss_dssp TSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEE
T ss_pred CCCcee--eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEe
Confidence 765421 1222222222 4689999988778888888888876643 111111 221 23322
Q ss_pred eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 142 DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 142 DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+-.+|++=.++.. .++ ..+.-...|++|+|+|... ..|+..-.|+++.+|+++..
T Consensus 290 ~D~~i~iwd~~~~---~~~--~~~~H~~~V~~vafsP~d~-~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 290 EDCTVAVLDADFS---EVF--RDLSHRDFVTGVAWSPLDH-SKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp TTSCEEEECTTSC---EEE--EECCCSSCEEEEEECSSST-TEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEECCCC---cEe--EECCCCCCEEEEEEeCCCC-CEEEEEcCCCeEEEEECCCC
Confidence 1223444444332 222 2334567899999998433 35666677999999998654
No 35
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.00083 Score=73.86 Aligned_cols=208 Identities=10% Similarity=0.042 Sum_probs=122.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEee--CCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRF--EEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~--~~~~~vqLWt 80 (1102)
+++|.|.|++||+.. .+..|.+|+ ++|-....|..+ ..|..+.|++|+..|++.... .....|.+|.
T Consensus 79 ~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d 148 (369)
T 3zwl_B 79 SIDVDCFTKYCVTGS------ADYSIKLWDVSNGQCVATWKSP----VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYE 148 (369)
T ss_dssp EEEECTTSSEEEEEE------TTTEEEEEETTTCCEEEEEECS----SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred EEEEcCCCCEEEEEe------CCCeEEEEECCCCcEEEEeecC----CCeEEEEEccCCCEEEEecCCccCCCCEEEEEE
Confidence 589999999999876 356899998 556666666533 369999999999999998632 1125899998
Q ss_pred cccceE--EE-------EEEEEeccC-CC-ceEEecCCCCceEEEEeeCCcEEEEEEEE------e----------eeec
Q 001314 81 FSNNHW--YL-------KYEIRYLRR-DG-IRFMWHPTKPLQLICWTLDGQITTYNFIW------T----------TAVM 133 (1102)
Q Consensus 81 ~~NYHW--YL-------Kqei~~~~~-~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w------~----------~~~~ 133 (1102)
.....- .+ ...+..... .. .++.|+|.... |++++.+|.+.+++..- . +..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 227 (369)
T 3zwl_B 149 IERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY-IIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS 227 (369)
T ss_dssp EEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE-EEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC
T ss_pred ecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE-EEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC
Confidence 866431 00 001111111 13 35889997665 77777788887766420 0 0111
Q ss_pred -CCcEEEEEe-CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCC--------------ceEEE
Q 001314 134 -ENSTALVID-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDG--------------CLCVV 197 (1102)
Q Consensus 134 -d~~~vaVID-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~--------------~l~l~ 197 (1102)
+...+++.. ..+|.+-.++.. .+ ...+..+.++..++|++++. .+++...++ .+.+|
T Consensus 228 ~~~~~l~~~~~d~~i~v~d~~~~---~~--~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 300 (369)
T 3zwl_B 228 PDLTYFITSSRDTNSFLVDVSTL---QV--LKKYETDCPLNTAVITPLKE--FIILGGGQEAKDVTTTSANEGKFEARFY 300 (369)
T ss_dssp TTSSEEEEEETTSEEEEEETTTC---CE--EEEEECSSCEEEEEECSSSS--EEEEEECCC-------------CEEEEE
T ss_pred CCCCEEEEecCCceEEEEECCCC---ce--eeeecCCCCceeEEecCCCc--eEEEeecCCCceEEEEecCCCcceeEEE
Confidence 223333332 335666665542 12 23334677889999988653 455555556 45555
Q ss_pred ecCCCCccccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 198 DLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 198 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
+......... .....+.+..+.|..++.+++.
T Consensus 301 d~~~~~~~~~------------~~~~~~~v~~~~~s~~~~~l~s 332 (369)
T 3zwl_B 301 HKIFEEEIGR------------VQGHFGPLNTVAISPQGTSYAS 332 (369)
T ss_dssp ETTTCCEEEE------------EECCSSCEEEEEECTTSSEEEE
T ss_pred ecCCCcchhh------------eecccCcEEEEEECCCCCEEEE
Confidence 5433211110 0122346777888877766654
No 36
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.99 E-value=0.00039 Score=77.34 Aligned_cols=174 Identities=13% Similarity=0.183 Sum_probs=108.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.|.|++||+.. ....|.+|+-. |-.. +.+.. ....|..++|++|+..||... ....|.+|...
T Consensus 127 ~~~~spdg~~l~~g~------~dg~v~i~~~~~~~~~--~~~~~-~~~~v~~~~~spdg~~lasg~---~dg~i~iwd~~ 194 (321)
T 3ow8_A 127 TLAFSPDSQYLATGT------HVGKVNIFGVESGKKE--YSLDT-RGKFILSIAYSPDGKYLASGA---IDGIINIFDIA 194 (321)
T ss_dssp CEEECTTSSEEEEEC------TTSEEEEEETTTCSEE--EEEEC-SSSCEEEEEECTTSSEEEEEE---TTSCEEEEETT
T ss_pred EEEECCCCCEEEEEc------CCCcEEEEEcCCCcee--EEecC-CCceEEEEEECCCCCEEEEEc---CCCeEEEEECC
Confidence 589999999999875 34678888743 3332 23332 233689999999999999875 24579999998
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE---------------Eeeeec-CCcEEEE-EeCC
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI---------------WTTAVM-ENSTALV-IDGS 144 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~---------------w~~~~~-d~~~vaV-IDG~ 144 (1102)
+.. +.+++.- .... .++.|+|...+ |+.+..+|.+.+++.. +.+..+ |...++. -+..
T Consensus 195 ~~~--~~~~~~~-h~~~v~~l~~spd~~~-l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~ 270 (321)
T 3ow8_A 195 TGK--LLHTLEG-HAMPIRSLTFSPDSQL-LVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDK 270 (321)
T ss_dssp TTE--EEEEECC-CSSCCCEEEECTTSCE-EEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCc--EEEEEcc-cCCceeEEEEcCCCCE-EEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCC
Confidence 765 2233321 1223 46899998776 7777778888876632 111112 2222222 2223
Q ss_pred eEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 145 KILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 145 ~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
+|++-.++.. .++ ..+ .-...|.+|+|++++. .|+..-.|+++.+|+.|
T Consensus 271 ~v~iwd~~~~---~~~--~~~~~h~~~v~~v~~s~~g~--~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 271 SVKVWDVGTR---TCV--HTFFDHQDQVWGVKYNGNGS--KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp CEEEEETTTT---EEE--EEECCCSSCEEEEEECTTSS--EEEEEETTCCEEEEECC
T ss_pred cEEEEeCCCC---EEE--EEEcCCCCcEEEEEECCCCC--EEEEEeCCCeEEEEeCC
Confidence 4555555432 111 111 2356799999988653 57777788999999864
No 37
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.99 E-value=0.00038 Score=78.94 Aligned_cols=190 Identities=9% Similarity=0.055 Sum_probs=109.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc-eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE-RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr-hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.|.|+++|... +..+..|.+|+-+..+ ..++ .. ...|..++|++||..||... .+.+.+|...
T Consensus 138 ~v~fSpDg~~la~as----~~~d~~i~iwd~~~~~~~~~~--~~--~~~V~~v~fspdg~~l~s~s----~~~~~~~~~~ 205 (365)
T 4h5i_A 138 LVYISREGTVAAIAS----SKVPAIMRIIDPSDLTEKFEI--ET--RGEVKDLHFSTDGKVVAYIT----GSSLEVISTV 205 (365)
T ss_dssp EEEECTTSSCEEEEE----SCSSCEEEEEETTTTEEEEEE--EC--SSCCCEEEECTTSSEEEEEC----SSCEEEEETT
T ss_pred EEEEcCCCCEEEEEE----CCCCCEEEEeECCCCcEEEEe--CC--CCceEEEEEccCCceEEecc----ceeEEEEEec
Confidence 478999999987654 1135689999865433 3333 21 23599999999999999864 4556666655
Q ss_pred cceEEEEEEEEeccCCCc-eEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCCCccc
Q 001314 83 NNHWYLKYEIRYLRRDGI-RFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPPPMY 161 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~~-~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPPPM~ 161 (1102)
+-..-.+ .........+ ++.|+|.... |+.++.++.....-+.|++.... ..+. ....+
T Consensus 206 ~~~~~~~-~~~~~~~~~v~~v~fspdg~~-l~~~s~d~~~~~~i~~~~~~~~~---~~~~-----~~~~~---------- 265 (365)
T 4h5i_A 206 TGSCIAR-KTDFDKNWSLSKINFIADDTV-LIAASLKKGKGIVLTKISIKSGN---TSVL-----RSKQV---------- 265 (365)
T ss_dssp TCCEEEE-ECCCCTTEEEEEEEEEETTEE-EEEEEESSSCCEEEEEEEEETTE---EEEE-----EEEEE----------
T ss_pred cCcceee-eecCCCCCCEEEEEEcCCCCE-EEEEecCCcceeEEeecccccce---ecce-----eeeee----------
Confidence 4431111 1111111223 4889987766 55555555433333445433111 0000 00000
Q ss_pred ccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 162 LFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 162 ~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
..-..+|.+|+|+|++. .|+.-..|+++.||+........ .+.....+.+..++|-.++.+++.
T Consensus 266 ---~~~~~~V~~~~~Spdg~--~lasgs~D~~V~iwd~~~~~~~~-----------~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 266 ---TNRFKGITSMDVDMKGE--LAVLASNDNSIALVKLKDLSMSK-----------IFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp ---ESSCSCEEEEEECTTSC--EEEEEETTSCEEEEETTTTEEEE-----------EETTSSSSCEEEEEECTTSCEEEE
T ss_pred ---cCCCCCeEeEEECCCCC--ceEEEcCCCEEEEEECCCCcEEE-----------EecCcccCCEEEEEECCCCCEEEE
Confidence 01234688999998753 67777888999999975422111 112223456888899888877764
No 38
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.98 E-value=0.0006 Score=74.70 Aligned_cols=178 Identities=12% Similarity=0.009 Sum_probs=114.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc----eeeeecCCccccceeeeeecCCCC-eEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE----RSSFDINEQIDSTVELLKWNCMSD-LLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr----hgeF~L~~~~~~~v~~L~Wn~DS~-iLAv~~~~~~~~~vqL 78 (1102)
+++|.|.|++||+.. .+..|.+|+-++.. ...+. .....|..++|++|+. .|+... ....|.+
T Consensus 16 ~~~~s~~~~~l~~~~------~d~~v~iw~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~l~~~~---~dg~i~~ 83 (342)
T 1yfq_A 16 DIKIIPSKSLLLITS------WDGSLTVYKFDIQAKNVDLLQSL---RYKHPLLCCNFIDNTDLQIYVGT---VQGEILK 83 (342)
T ss_dssp EEEEEGGGTEEEEEE------TTSEEEEEEEETTTTEEEEEEEE---ECSSCEEEEEEEESSSEEEEEEE---TTSCEEE
T ss_pred EEEEcCCCCEEEEEc------CCCeEEEEEeCCCCccccceeee---ecCCceEEEEECCCCCcEEEEEc---CCCeEEE
Confidence 589999999999876 35688898865543 11111 1234699999999999 888875 2457999
Q ss_pred EEc-ccceEEEEEEEEec-cCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEE-----------------------eeee
Q 001314 79 CFF-SNNHWYLKYEIRYL-RRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIW-----------------------TTAV 132 (1102)
Q Consensus 79 Wt~-~NYHWYLKqei~~~-~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w-----------------------~~~~ 132 (1102)
|.. .+-.. +.+... .... .++.|+| ...|+.++.+|.+.+++..- .+..
T Consensus 84 wd~~~~~~~---~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 158 (342)
T 1yfq_A 84 VDLIGSPSF---QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT 158 (342)
T ss_dssp ECSSSSSSE---EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE
T ss_pred EEeccCCce---EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEe
Confidence 998 66542 222210 2233 3589999 44477778888887765321 1112
Q ss_pred cCCcEEEEEeCCeEEeccCCC-CCCCCcccccccccCCceeEEEEec-CCCCceEEEEEeCCceEEEecCCC
Q 001314 133 MENSTALVIDGSKILVTPLSL-SLMPPPMYLFSLKFPTAVTEMAFYS-KSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 133 ~d~~~vaVIDG~~l~lTp~r~-a~VPPPM~~~~l~~~~~i~~vaf~~-~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+.+++++.-...+|.+-.++. .. .+........+.+|.+++|++ ++ +.+++...++.+.+|.+...
T Consensus 159 ~~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~i~~i~~~~~~~--~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 159 NSSRLIVGMNNSQVQWFRLPLCED--DNGTIEESGLKYQIRDVALLPKEQ--EGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp CSSEEEEEESTTEEEEEESSCCTT--CCCEEEECSCSSCEEEEEECSGGG--CEEEEEETTSEEEEEECCTT
T ss_pred cCCcEEEEeCCCeEEEEECCcccc--ccceeeecCCCCceeEEEECCCCC--CEEEEEecCCcEEEEEEcCC
Confidence 233433334444777777765 32 223334445677899999988 64 36777788899999998654
No 39
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.98 E-value=0.00022 Score=80.54 Aligned_cols=213 Identities=14% Similarity=0.156 Sum_probs=128.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceee---eecCCccccceeeeeecCC-CCeEEEEEeeCCCCeEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSS---FDINEQIDSTVELLKWNCM-SDLLAAVVRFEEYDSVKIC 79 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhge---F~L~~~~~~~v~~L~Wn~D-S~iLAv~~~~~~~~~vqLW 79 (1102)
+++|.|.|++||+.. .+..|.+|+-+....+. ..+.. ....|..++|++| +.+|+... ....|.+|
T Consensus 72 ~~~~s~~~~~l~~~~------~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~---~dg~v~iw 141 (416)
T 2pm9_A 72 DLDWSHNNKIIAGAL------DNGSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGG---NNGEIFIW 141 (416)
T ss_dssp EEEECSSSSCEEEEE------SSSCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEEC---SSSCEEBC
T ss_pred EEEECCCCCeEEEEc------cCCeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEc---CCCeEEEE
Confidence 689999999999976 34689999887633322 22222 2346999999999 88888764 24579999
Q ss_pred Ecccce------EEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------Ee--------------ee
Q 001314 80 FFSNNH------WYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------WT--------------TA 131 (1102)
Q Consensus 80 t~~NYH------WYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w~--------------~~ 131 (1102)
...+.. --+........... .++.|+|..+..|+.++.+|.+.+++.. +. +.
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred ECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 987653 10000000111222 4699999866668887888888876642 10 01
Q ss_pred ec-CC-cEEEEEeCC----eEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCcc
Q 001314 132 VM-EN-STALVIDGS----KILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDML 205 (1102)
Q Consensus 132 ~~-d~-~~vaVIDG~----~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~ 205 (1102)
.+ +. ..+++...+ +|.+-.++... .|+......-...|.+++|++... +.+++...++++.+|++......
T Consensus 222 ~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 222 WHPKNSTRVATATGSDNDPSILIWDLRNAN--TPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp ECSSCTTEEEEEECCSSSCCCCEEETTSTT--SCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESSSEEEEECSSSCCEE
T ss_pred ECCCCCCEEEEEECCCCCceEEEEeCCCCC--CCcEEeecCccCceeEEEeCCCCC-CeEEEEeCCCCEEEeeCCCCccc
Confidence 11 22 244443333 67777776632 233322213456899999998333 35677678899999997543222
Q ss_pred ccccCCceeeeeeccccccCceEEEEEecCc-eEEEE
Q 001314 206 EDLEGTEFVVEACISETAFGSVIHLIWLGSH-LLLSV 241 (1102)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~-~ll~~ 241 (1102)
..+ ....+.+..++|..++ .+++.
T Consensus 299 ~~~------------~~~~~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 299 SQF------------PARGNWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp EEE------------ECSSSCCCCEEECTTCTTEEEE
T ss_pred eee------------cCCCCceEEEEECCCCCCEEEE
Confidence 111 1122345667787766 45553
No 40
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.97 E-value=0.00089 Score=73.15 Aligned_cols=218 Identities=13% Similarity=0.096 Sum_probs=124.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce-eeeecCCccccceeeeeecCC--CCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCM--SDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~D--S~iLAv~~~~~~~~~vqLWt 80 (1102)
.++|.|.|++||+.. .+..|.+|+-++-.. ---++.+. ...|..++|+++ +++||..- ....|.+|.
T Consensus 14 ~~~~s~~g~~las~s------~D~~v~iw~~~~~~~~~~~~l~gH-~~~V~~v~~s~~~~g~~l~s~s---~D~~v~iWd 83 (297)
T 2pm7_B 14 DAVMDYYGKRMATCS------SDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCS---YDGKVMIWK 83 (297)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEEBCSSCBCCCEEECCC-SSCEEEEEECCGGGCSEEEEEE---TTTEEEEEE
T ss_pred EEEECCCCCEEEEEe------CCCEEEEEecCCCCcEEEEEEccc-cCCeEEEEecCCCcCCEEEEEc---CCCEEEEEE
Confidence 478999999999986 356899999765321 11234432 336999999864 88988764 235799999
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCC-CceEEEEeeCCcEEEEEEEEe-----------------eeec-C------
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTK-PLQLICWTLDGQITTYNFIWT-----------------TAVM-E------ 134 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~-pl~L~i~t~~g~~~~~~~~w~-----------------~~~~-d------ 134 (1102)
..+-.|-....+.. .... .++.|+|.. ...|+.++.+|.+.++++.-. +..+ +
T Consensus 84 ~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 84 EENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp BSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred cCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 98776533333221 1223 358999863 344777777888777654210 0000 0
Q ss_pred -------CcEEEE-EeCCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCC-CceEEEEEeCCceEEEecCCCCc
Q 001314 135 -------NSTALV-IDGSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSS-KNCLAAILSDGCLCVVDLPAPDM 204 (1102)
Q Consensus 135 -------~~~vaV-IDG~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~-~~~~a~vl~~~~l~l~~~~~~~~ 204 (1102)
...++. -...+|++-.++... ++......+. -...|.+|+|+++.. .+.++..-.|+++.+|+......
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~-~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCC-ceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 012222 122245555444321 1111112222 245799999998752 24677767899999998754221
Q ss_pred cccccCCceeeeeecc-ccccCceEEEEEecCceEEEE
Q 001314 205 LEDLEGTEFVVEACIS-ETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 205 ~~~l~~~~~~~~~~~~-~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
.. . .. .+. ....+.+..+.|-.++.+++.
T Consensus 242 ~~--~---~~---~~~~~~~~~~v~~~~~s~~g~~las 271 (297)
T 2pm7_B 242 PW--K---KT---LLKEEKFPDVLWRASWSLSGNVLAL 271 (297)
T ss_dssp CC--E---EE---ESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred cc--c---ee---eeecccCCCcEEEEEECCCCCEEEE
Confidence 10 0 00 000 111235667788777766654
No 41
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.97 E-value=0.00023 Score=80.33 Aligned_cols=179 Identities=13% Similarity=0.078 Sum_probs=107.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCC-eEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSD-LLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~-iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|++||+.. .+..|.+|+- +|-.... +.+. ...|..++|++|+. +|+..- ....|.+|+.
T Consensus 132 ~v~~spdg~~l~sgs------~d~~i~iwd~~~~~~~~~--~~~h-~~~V~~~~~~~~~~~~l~s~s---~D~~v~iwd~ 199 (344)
T 4gqb_B 132 TVSVLSSGTQAVSGS------KDICIKVWDLAQQVVLSS--YRAH-AAQVTCVAASPHKDSVFLSCS---EDNRILLWDT 199 (344)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEETTTTEEEEE--ECCC-SSCEEEEEECSSCTTEEEEEE---TTSCEEEEET
T ss_pred EEEECCCCCEEEEEe------CCCeEEEEECCCCcEEEE--EcCc-CCceEEEEecCCCCCceeeec---cccccccccc
Confidence 589999999999976 3568999984 4433333 3332 33699999999985 565442 2347999998
Q ss_pred ccceEEEEEEEEeccCC-C-ceEEecCCCCceEEEEeeCCcEEEEEEE---------------Eeeeec-CC-cEEEE-E
Q 001314 82 SNNHWYLKYEIRYLRRD-G-IRFMWHPTKPLQLICWTLDGQITTYNFI---------------WTTAVM-EN-STALV-I 141 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~-~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~---------------w~~~~~-d~-~~vaV-I 141 (1102)
.+..- .+++...... . .++.|+|.....|+.++.+|.+.+++.. +.+..+ |. ..++. -
T Consensus 200 ~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs 277 (344)
T 4gqb_B 200 RCPKP--ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLS 277 (344)
T ss_dssp TSSSC--EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEE
T ss_pred cccce--eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEe
Confidence 87652 2223222222 2 4689999887767888888888776543 111112 21 12222 2
Q ss_pred eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 142 DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 142 DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+-.+|++=.++.. .. .....-...|.+|+|++++.. .++..-.|+++.+|.++..
T Consensus 278 ~D~~i~vwd~~~~---~~--~~~~~H~~~V~~v~~sp~~~~-llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 278 EDCSLAVLDSSLS---EL--FRSQAHRDFVRDATWSPLNHS-LLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp TTSCEEEECTTCC---EE--EEECCCSSCEEEEEECSSSTT-EEEEEETTSCEEEEECCC-
T ss_pred CCCeEEEEECCCC---cE--EEEcCCCCCEEEEEEeCCCCe-EEEEEcCCCeEEEEECCCC
Confidence 2223444444432 11 112233567999999987643 3444456899999998653
No 42
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.96 E-value=0.012 Score=77.06 Aligned_cols=205 Identities=12% Similarity=0.134 Sum_probs=127.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCC--eEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSD--LLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~--iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.|++||+.. .+..|.+|+-. |-....|.- ....|..+.|+++++ +|+... ....|.+|+
T Consensus 662 ~~~~s~~~~~l~s~~------~d~~v~vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~l~sg~---~d~~v~vwd 729 (1249)
T 3sfz_A 662 CCAFSSDDSYIATCS------ADKKVKIWDSATGKLVHTYDE---HSEQVNCCHFTNKSNHLLLATGS---NDFFLKLWD 729 (1249)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECSSSSCCEEEEEE---TTSCEEEEE
T ss_pred EEEEecCCCEEEEEe------CCCeEEEEECCCCceEEEEcC---CCCcEEEEEEecCCCceEEEEEe---CCCeEEEEE
Confidence 589999999999986 35689999854 443444432 233699999999665 454432 345799999
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------Ee---------------------ee
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------WT---------------------TA 131 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w~---------------------~~ 131 (1102)
..+-.- .+.+. +.... .++.|+|.... |+.++.+|.+.+++.. +. +.
T Consensus 730 ~~~~~~--~~~~~-~h~~~v~~~~~sp~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 805 (1249)
T 3sfz_A 730 LNQKEC--RNTMF-GHTNSVNHCRFSPDDEL-LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCS 805 (1249)
T ss_dssp TTSSSE--EEEEC-CCSSCEEEEEECSSTTE-EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCC
T ss_pred CCCcch--hheec-CCCCCEEEEEEecCCCE-EEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEE
Confidence 988762 22222 22333 35899997765 8887888888776532 10 00
Q ss_pred e-cCCcEEEEEeCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccC
Q 001314 132 V-MENSTALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEG 210 (1102)
Q Consensus 132 ~-~d~~~vaVIDG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~ 210 (1102)
. +|...+++..+..+.+-.+..... .......-...|..++|++++. .+++...++++.+|++........+
T Consensus 806 ~s~dg~~l~~~~~~~v~~~d~~~~~~---~~~~~~~~~~~v~~~~~sp~~~--~l~~~~~dg~v~vwd~~~~~~~~~~-- 878 (1249)
T 3sfz_A 806 WSADGDKIIVAAKNKVLLFDIHTSGL---LAEIHTGHHSTIQYCDFSPYDH--LAVIALSQYCVELWNIDSRLKVADC-- 878 (1249)
T ss_dssp BCTTSSEEEEEETTEEEEEETTTCCE---EEEEECSSSSCCCEEEECSSTT--EEEEECSSSCEEEEETTTTEEEEEE--
T ss_pred ECCCCCEEEEEcCCcEEEEEecCCCc---eeEEcCCCCCceEEEEEcCCCC--EEEEEeCCCeEEEEEcCCCceeeec--
Confidence 1 234455565566677666654321 2222223456788999988653 5677788999999998643221111
Q ss_pred CceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 211 TEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
....+.+..+.|..++..++.
T Consensus 879 ----------~~h~~~v~~v~~spdg~~l~s 899 (1249)
T 3sfz_A 879 ----------RGHLSWVHGVMFSPDGSSFLT 899 (1249)
T ss_dssp ----------CCCSSCEEEEEECTTSSEEEE
T ss_pred ----------CCCccceEEEEECCCCCEEEE
Confidence 123345777888777755544
No 43
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.94 E-value=0.0015 Score=73.58 Aligned_cols=209 Identities=8% Similarity=0.042 Sum_probs=117.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCc-----------------------------------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQ----------------------------------- 47 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~----------------------------------- 47 (1102)
+++|.|.|.+||+.. .+..|.+|+- .|.....+..+..
T Consensus 69 ~~~~s~d~~~l~s~s------~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~ 142 (354)
T 2pbi_B 69 CMDWCKDKRRIVSSS------QDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNEN 142 (354)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCC
T ss_pred EEEECCCCCEEEEEe------CCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEecccccc
Confidence 589999999999986 3568888873 3333333332210
Q ss_pred ----------cccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCC-ceEEEE
Q 001314 48 ----------IDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKP-LQLICW 115 (1102)
Q Consensus 48 ----------~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~p-l~L~i~ 115 (1102)
....|..+.|++|+..|+..- ....|.+|...+..- .+.+.- .... .++.|+|... ..|+.+
T Consensus 143 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s---~D~~v~lwd~~~~~~--~~~~~~-h~~~v~~~~~~~~~~g~~l~sg 216 (354)
T 2pbi_B 143 MAAKKKSVAMHTNYLSACSFTNSDMQILTAS---GDGTCALWDVESGQL--LQSFHG-HGADVLCLDLAPSETGNTFVSG 216 (354)
T ss_dssp SGGGCEEEEECSSCEEEEEECSSSSEEEEEE---TTSEEEEEETTTCCE--EEEEEC-CSSCEEEEEECCCSSCCEEEEE
T ss_pred ccccceeeeccCCcEEEEEEeCCCCEEEEEe---CCCcEEEEeCCCCeE--EEEEcC-CCCCeEEEEEEeCCCCCEEEEE
Confidence 011256677777776666543 234799999877652 233321 1222 3577877533 457777
Q ss_pred eeCCcEEEEEEE-------E--------eeeec-CCcEEEE-EeCCeEEeccCCCCCCCCcccccc-cccCCceeEEEEe
Q 001314 116 TLDGQITTYNFI-------W--------TTAVM-ENSTALV-IDGSKILVTPLSLSLMPPPMYLFS-LKFPTAVTEMAFY 177 (1102)
Q Consensus 116 t~~g~~~~~~~~-------w--------~~~~~-d~~~vaV-IDG~~l~lTp~r~a~VPPPM~~~~-l~~~~~i~~vaf~ 177 (1102)
+.+|.+.+++.. + .+..+ +...+++ -+..+|++-.++... ++..+. -.....+.+++|+
T Consensus 217 s~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~---~~~~~~~~~~~~~~~~~~~s 293 (354)
T 2pbi_B 217 GCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR---EVAIYSKESIIFGASSVDFS 293 (354)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCTTCCSCEEEEEEC
T ss_pred eCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc---EEEEEcCCCcccceeEEEEe
Confidence 778888776532 1 11111 2223332 334457777666531 111111 1123367889998
Q ss_pred cCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 178 SKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 178 ~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
+++. .+++-..++++.+|++........+ ....+.+..+.|..++..++.
T Consensus 294 ~~g~--~l~~g~~d~~i~vwd~~~~~~~~~l------------~~h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 294 LSGR--LLFAGYNDYTINVWDVLKGSRVSIL------------FGHENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp TTSS--EEEEEETTSCEEEEETTTCSEEEEE------------CCCSSCEEEEEECTTSSCEEE
T ss_pred CCCC--EEEEEECCCcEEEEECCCCceEEEE------------ECCCCcEEEEEECCCCCEEEE
Confidence 8653 5666678899999997543222111 122345777788777765553
No 44
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.94 E-value=0.0032 Score=70.25 Aligned_cols=184 Identities=10% Similarity=0.065 Sum_probs=112.6
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCc-ceeeeecCC----------ccccceeeeeecC-CCCeEEEEEee
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGL-ERSSFDINE----------QIDSTVELLKWNC-MSDLLAAVVRF 70 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGL-rhgeF~L~~----------~~~~~v~~L~Wn~-DS~iLAv~~~~ 70 (1102)
+++|.| .|++||+.. .+..|.+|+-++. ....+..+. .....|..++|++ ++.+|+...
T Consensus 48 ~~~~s~~~~~~l~~~~------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~-- 119 (408)
T 4a11_B 48 TLDIEPVEGRYMLSGG------SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS-- 119 (408)
T ss_dssp EEEECTTTCCEEEEEE------TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE--
T ss_pred EEEEecCCCCEEEEEc------CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe--
Confidence 589999 999999976 3567888886543 222332210 1234699999999 777888764
Q ss_pred CCCCeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCC--ceEEEEeeCCcEEEEEEE-------E--------eeee
Q 001314 71 EEYDSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKP--LQLICWTLDGQITTYNFI-------W--------TTAV 132 (1102)
Q Consensus 71 ~~~~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~p--l~L~i~t~~g~~~~~~~~-------w--------~~~~ 132 (1102)
....|++|...+..- .+.+. .... ..+.|++..+ ..|++++.+|.+.+++.. + .+..
T Consensus 120 -~d~~i~iwd~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 120 -FDKTLKVWDTNTLQT--ADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp -TTSEEEEEETTTTEE--EEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred -CCCeEEEeeCCCCcc--ceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence 345899999988662 22222 2233 4578887655 247777888888877643 0 1111
Q ss_pred c-CCc-EEEEE-eCCeEEeccCCCCC------------CCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEE
Q 001314 133 M-ENS-TALVI-DGSKILVTPLSLSL------------MPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVV 197 (1102)
Q Consensus 133 ~-d~~-~vaVI-DG~~l~lTp~r~a~------------VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~ 197 (1102)
+ +.. .+++- ....|.+-.++... ...............|.+++|++++ +.+++...++.+.+|
T Consensus 195 ~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 195 SPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG--LHLLTVGTDNRMRLW 272 (408)
T ss_dssp CSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS--SEEEEEETTSCEEEE
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC--CEEEEecCCCeEEEE
Confidence 2 222 23332 22346665555432 1111111112345679999998864 467777889999999
Q ss_pred ecCCC
Q 001314 198 DLPAP 202 (1102)
Q Consensus 198 ~~~~~ 202 (1102)
++...
T Consensus 273 d~~~~ 277 (408)
T 4a11_B 273 NSSNG 277 (408)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 98653
No 45
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.93 E-value=0.0095 Score=68.22 Aligned_cols=178 Identities=13% Similarity=0.097 Sum_probs=106.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.|+|.+ +|+||+.- +..|.+|+ .+|-....|.+..+ ...|..++|++||+.||+.. ....|+||...
T Consensus 110 ~l~wS~-~n~lAvgl-------d~tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg~~lasgs---~Dg~v~iWd~~ 177 (420)
T 4gga_A 110 LVDWSS-GNVLAVAL-------DNSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGT---SSAEVQLWDVQ 177 (420)
T ss_dssp CEEECT-TSEEEEEE-------TTEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEE---TTSCEEEEETT
T ss_pred eEEECC-CCEEEEEe-------CCEEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCCCEEEEEE---CCCeEEEEEcC
Confidence 589986 57898864 45899997 56766666776643 23699999999999999875 23479999998
Q ss_pred cceEEEEEEEEeccC-CC-ceEEecCCCCceEEEEeeCCcEEEEEEEE----------------eeee-cCCcEEEE-Ee
Q 001314 83 NNHWYLKYEIRYLRR-DG-IRFMWHPTKPLQLICWTLDGQITTYNFIW----------------TTAV-MENSTALV-ID 142 (1102)
Q Consensus 83 NYHWYLKqei~~~~~-~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w----------------~~~~-~d~~~vaV-ID 142 (1102)
+..- ...+... .. .++.|++ ..|..+..+|.+..++..- .... .+...++. -+
T Consensus 178 ~~~~----~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~ 250 (420)
T 4gga_A 178 QQKR----LRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN 250 (420)
T ss_dssp TTEE----EEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcE----EEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeec
Confidence 8651 1112222 22 3578875 3466666666665544210 0001 12223332 22
Q ss_pred CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEE--eCCceEEEecCC
Q 001314 143 GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAIL--SDGCLCVVDLPA 201 (1102)
Q Consensus 143 G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl--~~~~l~l~~~~~ 201 (1102)
...+.+-+.+..-...............|.+++|++... +.+++.. .|+++.+|+...
T Consensus 251 D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~-~~la~~~gs~D~~I~iwd~~t 310 (420)
T 4gga_A 251 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS-NVLATGGGTSDRHIRIWNVCS 310 (420)
T ss_dssp TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCT-TEEEEEECTTTCEEEEEETTT
T ss_pred cccceEEeeccccccceeeeeecccCCceeeeeeCCCcc-cEEEEEeecCCCEEEEEeCCc
Confidence 234555555543222222223334566799999998655 3444333 478999998754
No 46
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.93 E-value=0.00028 Score=88.31 Aligned_cols=219 Identities=14% Similarity=0.097 Sum_probs=129.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc-eeeeecCCccccceeeeeecCC--CCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE-RSSFDINEQIDSTVELLKWNCM--SDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr-hgeF~L~~~~~~~v~~L~Wn~D--S~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.|++||+.. .+..|.+|.-++-. .-..++++. ...|..+.|+++ ++.|+... ....|.+|.
T Consensus 14 ~l~~s~dg~~latg~------~dg~I~vwd~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~~~l~s~s---~Dg~I~vwd 83 (753)
T 3jro_A 14 DAVLDYYGKRLATCS------SDKTIKIFEVEGETHKLIDTLTGH-EGPVWRVDWAHPKFGTILASCS---YDGKVLIWK 83 (753)
T ss_dssp EECCCSSSCCEEEEE------TTTEEEEEEEETTEEEEEEEECCC-SSCEEEEEECCTTSCSEEEEEE---TTSCEEEEE
T ss_pred EEEECCCCCeEEEEE------CCCcEEEEecCCCCCccceeccCC-cCceEEEEecCCCCCCEEEEEe---CCCeEEEEE
Confidence 589999999999976 35689999865321 112233332 346999999988 99999875 235799999
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCC-CceEEEEeeCCcEEEEEEEEe-----------------eeec--------
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTK-PLQLICWTLDGQITTYNFIWT-----------------TAVM-------- 133 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~-pl~L~i~t~~g~~~~~~~~w~-----------------~~~~-------- 133 (1102)
..+..|-..+.+.. .... .++.|+|.. ...|+.++.+|.+.+++..-. +..+
T Consensus 84 ~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 84 EENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred CCCCcccccccccC-CCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 99988755444432 2233 468999983 344888888888887765311 0011
Q ss_pred ------CCcEEEE-EeCCeEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCC-CceEEEEEeCCceEEEecCCCCc
Q 001314 134 ------ENSTALV-IDGSKILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSS-KNCLAAILSDGCLCVVDLPAPDM 204 (1102)
Q Consensus 134 ------d~~~vaV-IDG~~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~-~~~~a~vl~~~~l~l~~~~~~~~ 204 (1102)
|...+++ -+..+|.+-.++....+ ......+ .-..+|.+++|+++.. .+.+++...+|++.+|+......
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~-~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCccc-ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence 1222322 22233555555443211 1111122 2356799999998731 24677777899999999865322
Q ss_pred cccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 205 LEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 205 ~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
..... . .......+.+..++|..++..+++
T Consensus 242 ~~~~~---~----~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 242 PWKKT---L----LKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp CCBCC---B----SSSSCCSSCCCCEEECTTTCCEEE
T ss_pred cceeE---E----eccCCCCCceEEEEEcCCCCEEEE
Confidence 11000 0 000112235667788777765554
No 47
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.93 E-value=0.00085 Score=73.19 Aligned_cols=177 Identities=12% Similarity=0.119 Sum_probs=107.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCC-cceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNG-LERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNG-LrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+-.. -....+ .. ....|..++|++|++.|+..- ....|++|...
T Consensus 28 ~~~~s~~~~~l~s~~------~dg~i~iw~~~~~~~~~~~--~~-h~~~v~~~~~~~~~~~l~s~~---~d~~i~vwd~~ 95 (312)
T 4ery_A 28 SVKFSPNGEWLASSS------ADKLIKIWGAYDGKFEKTI--SG-HKLGISDVAWSSDSNLLVSAS---DDKTLKIWDVS 95 (312)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEETTTCCEEEEE--CC-CSSCEEEEEECTTSSEEEEEE---TTSEEEEEETT
T ss_pred EEEECCCCCEEEEee------CCCeEEEEeCCCcccchhh--cc-CCCceEEEEEcCCCCEEEEEC---CCCEEEEEECC
Confidence 589999999999976 345788887543 222222 22 234699999999999999864 24589999988
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----E----------eeeec-CCcEEEEEe-CC
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----W----------TTAVM-ENSTALVID-GS 144 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w----------~~~~~-d~~~vaVID-G~ 144 (1102)
+.. ..+.+. +.... .++.|+|...+ |+.+..+|.+.+++.. . .+..+ +...+++.. ..
T Consensus 96 ~~~--~~~~~~-~~~~~v~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 96 SGK--CLKTLK-GHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp TCC--EEEEEE-CCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCc--EEEEEc-CCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 765 122222 12233 35899997765 7777778888776532 0 00111 222333221 22
Q ss_pred eEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 145 KILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 145 ~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
+|.+-.++.. .++......-..++..++|++++ +.+++...++.+.+|++..
T Consensus 172 ~i~~wd~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 172 LCRIWDTASG---QCLKTLIDDDNPPVSFVKFSPNG--KYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp CEEEEETTTC---CEEEEECCSSCCCEEEEEECTTS--SEEEEEETTTEEEEEETTT
T ss_pred cEEEEECCCC---ceeeEEeccCCCceEEEEECCCC--CEEEEEcCCCeEEEEECCC
Confidence 3455444432 11111111234568889998865 3567777889999999754
No 48
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.92 E-value=0.0033 Score=82.29 Aligned_cols=209 Identities=8% Similarity=0.007 Sum_probs=117.4
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+- +|.....| ++ ....|..++|++|+..||... ....|.+|...
T Consensus 620 ~~~~s~~~~~l~s~~------~d~~i~vw~~~~~~~~~~~--~~-h~~~v~~~~~s~~~~~l~s~~---~d~~v~vwd~~ 687 (1249)
T 3sfz_A 620 HACFSQDGQRIASCG------ADKTLQVFKAETGEKLLDI--KA-HEDEVLCCAFSSDDSYIATCS---ADKKVKIWDSA 687 (1249)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEETTTCCEEEEE--CC-CSSCEEEEEECTTSSEEEEEE---TTSEEEEEETT
T ss_pred EEEECCCCCEEEEEe------CCCeEEEEECCCCCEEEEe--cc-CCCCEEEEEEecCCCEEEEEe---CCCeEEEEECC
Confidence 579999999999976 3568889984 45444443 32 234699999999999999875 24579999998
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCC-CceEEEEeeCCcEEEEEEE---------------Eeeeec-CCcEEEEEe-C
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTK-PLQLICWTLDGQITTYNFI---------------WTTAVM-ENSTALVID-G 143 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~-pl~L~i~t~~g~~~~~~~~---------------w~~~~~-d~~~vaVID-G 143 (1102)
+... .+.+.. .... .++.|+|.. ...++.++.+|.+.+++.. +.+..+ +...+++.. .
T Consensus 688 ~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 688 TGKL--VHTYDE-HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp TCCE--EEEEEC-CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred CCce--EEEEcC-CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 7652 233321 2223 458998853 3446666677777765521 111111 222222221 1
Q ss_pred CeEEeccCCCCCCC---------CcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCcee
Q 001314 144 SKILVTPLSLSLMP---------PPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFV 214 (1102)
Q Consensus 144 ~~l~lTp~r~a~VP---------PPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~ 214 (1102)
.+|.+-.++..... .+.....-.....+.+++|++++. . .++.+++.+.+|..........+
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~--~-l~~~~~~~v~~~d~~~~~~~~~~------ 835 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGD--K-IIVAAKNKVLLFDIHTSGLLAEI------ 835 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSS--E-EEEEETTEEEEEETTTCCEEEEE------
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCC--E-EEEEcCCcEEEEEecCCCceeEE------
Confidence 23443333221100 000011112334677889988754 2 44567899999987643322111
Q ss_pred eeeeccccccCceEEEEEecCceEEEE
Q 001314 215 VEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 215 ~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
.....+.+..+.|..++.++++
T Consensus 836 -----~~~~~~~v~~~~~sp~~~~l~~ 857 (1249)
T 3sfz_A 836 -----HTGHHSTIQYCDFSPYDHLAVI 857 (1249)
T ss_dssp -----ECSSSSCCCEEEECSSTTEEEE
T ss_pred -----cCCCCCceEEEEEcCCCCEEEE
Confidence 1122345666777777766654
No 49
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.91 E-value=0.00054 Score=76.20 Aligned_cols=185 Identities=16% Similarity=0.117 Sum_probs=104.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceee--eecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSS--FDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhge--F~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.|++||+.. .+..|.+|+- ++-...+ -.+++ ....|..+.|++|+.+||..- ....|++|.
T Consensus 112 ~v~~sp~g~~las~s------~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s---~D~~i~iW~ 181 (330)
T 2hes_X 112 GVAWSNDGYYLATCS------RDKSVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEALLASSS---YDDTVRIWK 181 (330)
T ss_dssp EEEECTTSCEEEEEE------TTSCEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSSEEEEEE---TTSCEEEEE
T ss_pred EEEECCCCCEEEEEe------CCCEEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCCEEEEEc---CCCeEEEEE
Confidence 589999999999986 3568999986 3322222 12332 233699999999999998764 234799998
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCCC-ceEEEEeeCCcEEEEEEEE---------ee---------------eecC
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTKP-LQLICWTLDGQITTYNFIW---------TT---------------AVME 134 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~p-l~L~i~t~~g~~~~~~~~w---------~~---------------~~~d 134 (1102)
..+-.|-..+.+. +.... .++.|+|... ..|+.+..+|.+.++++.- .. ..++
T Consensus 182 ~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~ 260 (330)
T 2hes_X 182 DYDDDWECVAVLN-GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGF 260 (330)
T ss_dssp EETTEEEEEEEEC-CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECT
T ss_pred CCCCCeeEEEEcc-CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcC
Confidence 7665554434332 11223 3589999753 4577777788888776531 11 1112
Q ss_pred CcEEEEE-eCCeEEeccCCCCCCCCcccccccccCC-ceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 135 NSTALVI-DGSKILVTPLSLSLMPPPMYLFSLKFPT-AVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 135 ~~~vaVI-DG~~l~lTp~r~a~VPPPM~~~~l~~~~-~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
++.++.. ...+|.+-...... +.+.......-.. .|++|+|++.+..+.++.--.|+++.+|++.
T Consensus 261 ~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 261 NGLIASVGADGVLAVYEEVDGE-WKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp TSCEEEEETTSCEEEEEEETTE-EEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred CCEEEEEeCCCEEEEEEcCCCc-eEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 2323221 11234443322110 0001111011122 7899999985333467766788999999864
No 50
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.90 E-value=0.002 Score=73.43 Aligned_cols=181 Identities=10% Similarity=0.063 Sum_probs=109.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
+++|.|.|++||+.. .+..|.+|+-..-+. ...+.+. ...|..++|++|++.|+..- ....|.+|...+
T Consensus 128 ~v~~s~dg~~l~s~~------~d~~i~iwd~~~~~~-~~~~~~h-~~~v~~~~~~p~~~~l~s~s---~d~~v~iwd~~~ 196 (393)
T 1erj_A 128 SVCFSPDGKFLATGA------EDRLIRIWDIENRKI-VMILQGH-EQDIYSLDYFPSGDKLVSGS---GDRTVRIWDLRT 196 (393)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEETTTTEE-EEEECCC-SSCEEEEEECTTSSEEEEEE---TTSEEEEEETTT
T ss_pred EEEECCCCCEEEEEc------CCCeEEEEECCCCcE-EEEEccC-CCCEEEEEEcCCCCEEEEec---CCCcEEEEECCC
Confidence 589999999999976 356899998654322 1223332 33699999999999998654 245799999987
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE----------------------Eeeeec-CCcEEE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI----------------------WTTAVM-ENSTAL 139 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~----------------------w~~~~~-d~~~va 139 (1102)
...- ..+...+. .++.|+|.+...|+.++.+|.+.+++.. +.+..+ |...++
T Consensus 197 ~~~~----~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~ 272 (393)
T 1erj_A 197 GQCS----LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVV 272 (393)
T ss_dssp TEEE----EEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEE
T ss_pred CeeE----EEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEE
Confidence 6532 22223344 4589999777668888888887776521 111122 222333
Q ss_pred EE-eCCeEEeccCCCCCCCCc-------cccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 140 VI-DGSKILVTPLSLSLMPPP-------MYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 140 VI-DG~~l~lTp~r~a~VPPP-------M~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
.- ...+|++-.++....+.+ .+...+ .-...|.+++|++++. .++.-..|+++.+|+...
T Consensus 273 s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--~l~sgs~D~~v~iwd~~~ 341 (393)
T 1erj_A 273 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDE--YILSGSKDRGVLFWDKKS 341 (393)
T ss_dssp EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGC--EEEEEETTSEEEEEETTT
T ss_pred EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCC--EEEEEeCCCeEEEEECCC
Confidence 32 233566655554322111 111111 2244688999988653 566667789999998754
No 51
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.90 E-value=0.00089 Score=74.65 Aligned_cols=181 Identities=13% Similarity=0.093 Sum_probs=109.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCC----------CeEEEEEeeCCC
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMS----------DLLAAVVRFEEY 73 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS----------~iLAv~~~~~~~ 73 (1102)
+++|.|.|++||+.. .+..|.+|+-.|-....+.........|..+.|++++ ..||..- ..
T Consensus 123 ~v~~sp~~~~l~s~~------~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~---~d 193 (343)
T 2xzm_R 123 SVAFSPDNRQILSAG------AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG---WD 193 (343)
T ss_dssp EEEECSSTTEEEEEE------TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE---TT
T ss_pred EEEECCCCCEEEEEc------CCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc---CC
Confidence 589999999999876 3568999997754332222111223458999999997 5677653 34
Q ss_pred CeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEE-E--------------Eeeeec-CCc
Q 001314 74 DSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNF-I--------------WTTAVM-ENS 136 (1102)
Q Consensus 74 ~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~-~--------------w~~~~~-d~~ 136 (1102)
..|.+|.... . +...+. +.... .++.|+|...+ |+.++.+|.+.+++. . +.+..+ +..
T Consensus 194 ~~i~iwd~~~-~--~~~~~~-~h~~~v~~~~~s~~g~~-l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~ 268 (343)
T 2xzm_R 194 GRLKVWNTNF-Q--IRYTFK-AHESNVNHLSISPNGKY-IATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQ 268 (343)
T ss_dssp SEEEEEETTT-E--EEEEEE-CCSSCEEEEEECTTSSE-EEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSC
T ss_pred CEEEEEcCCC-c--eeEEEc-CccccceEEEECCCCCE-EEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCC
Confidence 5899999543 1 222222 11223 45899998766 788788888887665 1 111122 333
Q ss_pred EEEEEeCCeEEeccCCCCCC-------CCcccccc--cccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 137 TALVIDGSKILVTPLSLSLM-------PPPMYLFS--LKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 137 ~vaVIDG~~l~lTp~r~a~V-------PPPM~~~~--l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
.+++-....+++-.+...-. ++|..... ......|.+|+|++++. .+++-..||++.+|.+.
T Consensus 269 ~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~--~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 269 WVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK--KLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp EEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC--CEEEEETTSEEEEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC--eEEEecCCceEEEEEEE
Confidence 55554444566655543211 11111100 02234688999998754 56666789999999864
No 52
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.90 E-value=0.00049 Score=77.35 Aligned_cols=182 Identities=12% Similarity=0.034 Sum_probs=116.8
Q ss_pred ceeeccCC-CeEEEEeeccCCCCCCeEEEEecCCcce-eeeecCCccccceeeeeecC-CCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSG-ANIAAVYDRKSENKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNC-MSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsG-nlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~-DS~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.| ++||+.. .+..|.+|+-++.+. ..+.+.+ ....|..++|++ |+..|+... ....|.+|.
T Consensus 78 ~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~---~d~~i~iwd 147 (383)
T 3ei3_B 78 SLEWHPTHPTTVAVGS------KGGDIILWDYDVQNKTSFIQGMG-PGDAITGMKFNQFNTNQLFVSS---IRGATTLRD 147 (383)
T ss_dssp EEEECSSCTTEEEEEE------BTSCEEEEETTSTTCEEEECCCS-TTCBEEEEEEETTEEEEEEEEE---TTTEEEEEE
T ss_pred EEEECCCCCCEEEEEc------CCCeEEEEeCCCcccceeeecCC-cCCceeEEEeCCCCCCEEEEEe---CCCEEEEEE
Confidence 58999999 8999876 356899999875433 3333322 234799999999 789998874 245899999
Q ss_pred cccceEEEEEEEEeccC--CC-ceEEecCCCCceEEEEeeCCcEEEEEEE--------------Eeeeec-CCc-EEEEE
Q 001314 81 FSNNHWYLKYEIRYLRR--DG-IRFMWHPTKPLQLICWTLDGQITTYNFI--------------WTTAVM-ENS-TALVI 141 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~--~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~--------------w~~~~~-d~~-~vaVI 141 (1102)
..+-. .+.+..... .. .++.|+|.... |+.++.+|.+.+++.. ..+..+ +.. .+++-
T Consensus 148 ~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 148 FSGSV---IQVFAKTDSWDYWYCCVDVSVSRQM-LATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp TTSCE---EEEEECCCCSSCCEEEEEEETTTTE-EEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEE
T ss_pred CCCCc---eEEEeccCCCCCCeEEEEECCCCCE-EEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEE
Confidence 98743 222222111 22 35899998775 7887888888776631 111122 222 44443
Q ss_pred e-CCeEEeccCCCCCCCCcccccccccCCceeEEEEec-CCCCceEEEEEeCCceEEEecCCC
Q 001314 142 D-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYS-KSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 142 D-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~-~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
. ..+|++-.++.... +.-....+.....|.+++|++ ++ +.+++...++++.+|++...
T Consensus 224 ~~d~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~--~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKD-KNSYIAEMPHEKPVNAAYFNPTDS--TKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp ETTSEEEEEEGGGCCS-TTCEEEEEECSSCEEEEEECTTTS--CEEEEEESSSEEEEEETTBT
T ss_pred eCCCEEEEEeCCCCCc-ccceEEEecCCCceEEEEEcCCCC--CEEEEEcCCCcEEEEECCCC
Confidence 2 33577766665321 122223335677899999998 54 36777778899999998653
No 53
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.90 E-value=0.0011 Score=73.75 Aligned_cols=206 Identities=12% Similarity=0.063 Sum_probs=119.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc---eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE---RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr---hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|+|++||+.. .+..|.+|+-..-. .-...+++. ...|..+.|++|+.+++.- ....|.+|.
T Consensus 102 ~~~~s~~~~~l~s~~------~d~~v~iw~~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~l~s~s----~d~~i~~wd 170 (340)
T 1got_B 102 TCAYAPSGNYVACGG------LDNICSIYNLKTREGNVRVSRELAGH-TGYLSCCRFLDDNQIVTSS----GDTTCALWD 170 (340)
T ss_dssp EEEECTTSSEEEEEE------TTCEEEEEETTTCSBSCEEEEEEECC-SSCEEEEEEEETTEEEEEE----TTSCEEEEE
T ss_pred EEEECCCCCEEEEEe------CCCeEEEEECccCCCcceeEEEecCC-CccEEEEEECCCCcEEEEE----CCCcEEEEE
Confidence 478999999999976 35688899754321 111122222 2358889999998754432 245799999
Q ss_pred cccceEEEEEEEEeccC-CC-ceEEecCCCCceEEEEeeCCcEEEEEEE---------------Eeeeec-CCcEEEE-E
Q 001314 81 FSNNHWYLKYEIRYLRR-DG-IRFMWHPTKPLQLICWTLDGQITTYNFI---------------WTTAVM-ENSTALV-I 141 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~-~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~---------------w~~~~~-d~~~vaV-I 141 (1102)
..+..- .. .+... .. .++.|+|...+ |+.+..+|.+.+++.. +.++.+ +...+++ -
T Consensus 171 ~~~~~~--~~--~~~~h~~~v~~~~~~~~~~~-l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 171 IETGQQ--TT--TFTGHTGDVMSLSLAPDTRL-FVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp TTTTEE--EE--EECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCcE--EE--EEcCCCCceEEEEECCCCCE-EEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc
Confidence 887651 12 22222 23 46899997765 7777778888776532 111111 2233333 2
Q ss_pred eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccc
Q 001314 142 DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISE 221 (1102)
Q Consensus 142 DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~ 221 (1102)
+..+|++-.++... +.+.+..-.....|.+++|++++. .+++-..++++.+|+.........+ .
T Consensus 246 ~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~--~l~~g~~d~~i~vwd~~~~~~~~~~------------~ 309 (340)
T 1got_B 246 DDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGR--LLLAGYDDFNCNVWDALKADRAGVL------------A 309 (340)
T ss_dssp TTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSS--EEEEEETTSEEEEEETTTCCEEEEE------------E
T ss_pred CCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCC--EEEEECCCCeEEEEEcccCcEeeEe------------e
Confidence 23356666665421 111111112234688999998653 6777788899999997543222111 1
Q ss_pred cccCceEEEEEecCceEEEE
Q 001314 222 TAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 222 ~~~~~~~~~~w~~~~~ll~~ 241 (1102)
...+.+..+.|..++..++.
T Consensus 310 ~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 310 GHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp CCSSCEEEEEECTTSSCEEE
T ss_pred cCCCcEEEEEEcCCCCEEEE
Confidence 22245667778777665553
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.89 E-value=0.0072 Score=68.68 Aligned_cols=200 Identities=14% Similarity=0.104 Sum_probs=118.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc-eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE-RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr-hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.| ++++|+.. +..|.+|+-+.-+ ...+... ....|..++|++|++.||+.. ....|++|...
T Consensus 98 ~~~~s~-~~l~~~~~-------d~~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~---~dg~i~iwd~~ 164 (401)
T 4aez_A 98 LLDWSN-LNVVAVAL-------ERNVYVWNADSGSVSALAETD--ESTYVASVKWSHDGSFLSVGL---GNGLVDIYDVE 164 (401)
T ss_dssp CEEECT-TSEEEEEE-------TTEEEEEETTTCCEEEEEECC--TTCCEEEEEECTTSSEEEEEE---TTSCEEEEETT
T ss_pred EEeecC-CCEEEEEC-------CCeEEEeeCCCCcEeEeeecC--CCCCEEEEEECCCCCEEEEEC---CCCeEEEEECc
Confidence 478876 45666654 4589999876433 3333332 344699999999999999875 24579999988
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE----------------Eeeeec-CCcEEEEEe-C
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI----------------WTTAVM-ENSTALVID-G 143 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~----------------w~~~~~-d~~~vaVID-G 143 (1102)
+... .+.+. +.... .++.|++ ..|+.++.+|.+.+++.. ..+..+ +...+++.. .
T Consensus 165 ~~~~--~~~~~-~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 238 (401)
T 4aez_A 165 SQTK--LRTMA-GHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND 238 (401)
T ss_dssp TCCE--EEEEC-CCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCeE--EEEec-CCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC
Confidence 7652 22222 22233 4589965 357777778888776643 011111 333444432 2
Q ss_pred CeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEE---eCCceEEEecCCCCccccccCCceeeeeecc
Q 001314 144 SKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAIL---SDGCLCVVDLPAPDMLEDLEGTEFVVEACIS 220 (1102)
Q Consensus 144 ~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl---~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~ 220 (1102)
.+|.+-.++. .-|+... ......|.+++|++++.. +.+.. .++.+.+|++........+
T Consensus 239 ~~v~iwd~~~---~~~~~~~-~~~~~~v~~~~~~p~~~~--ll~~~~gs~d~~i~i~d~~~~~~~~~~------------ 300 (401)
T 4aez_A 239 NVVQIWDARS---SIPKFTK-TNHNAAVKAVAWCPWQSN--LLATGGGTMDKQIHFWNAATGARVNTV------------ 300 (401)
T ss_dssp SCEEEEETTC---SSEEEEE-CCCSSCCCEEEECTTSTT--EEEEECCTTTCEEEEEETTTCCEEEEE------------
T ss_pred CeEEEccCCC---CCccEEe-cCCcceEEEEEECCCCCC--EEEEecCCCCCEEEEEECCCCCEEEEE------------
Confidence 4566666665 2222211 124567899999986542 33333 3899999998643221101
Q ss_pred ccccCceEEEEEecCceEEEE
Q 001314 221 ETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 221 ~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
...+.+..++|..++..+++
T Consensus 301 -~~~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 301 -DAGSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp -ECSSCEEEEEECSSSSEEEE
T ss_pred -eCCCcEEEEEECCCCCeEEE
Confidence 11235778888877766654
No 55
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.89 E-value=0.00097 Score=73.64 Aligned_cols=217 Identities=16% Similarity=0.146 Sum_probs=123.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecC--CCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNC--MSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~--DS~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.|++||+.. .+..|.+|+-+ |-..--.++++. ...|..++|++ ++++||..- ....|.+|.
T Consensus 18 ~v~~s~~g~~lasgs------~D~~v~lwd~~~~~~~~~~~l~gH-~~~V~~v~~~~~~~~~~l~s~s---~D~~v~iWd 87 (316)
T 3bg1_A 18 DAQMDYYGTRLATCS------SDRSVKIFDVRNGGQILIADLRGH-EGPVWQVAWAHPMYGNILASCS---YDRKVIIWR 87 (316)
T ss_dssp EEEECGGGCEEEEEE------TTTEEEEEEEETTEEEEEEEEECC-SSCEEEEEECCGGGSSCEEEEE---TTSCEEEEC
T ss_pred EeeEcCCCCEEEEEe------CCCeEEEEEecCCCcEEEEEEcCC-CccEEEEEeCCCCCCCEEEEEE---CCCEEEEEE
Confidence 579999999999976 36789999854 321112344543 23699999986 488888764 234799999
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCC-CceEEEEeeCCcEEEEEEE----Eeee----ecCCc--------------
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTK-PLQLICWTLDGQITTYNFI----WTTA----VMENS-------------- 136 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~-pl~L~i~t~~g~~~~~~~~----w~~~----~~d~~-------------- 136 (1102)
..+-.|-..+.+. +.... .++.|+|.. ...|+.++.+|.+.+++.. |... .+..+
T Consensus 88 ~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 88 EENGTWEKSHEHA-GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CSSSCCCEEEEEC-CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred CCCCcceEEEEcc-CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 9887654333332 12233 469999974 4458888888988887653 3211 00000
Q ss_pred --------------EEEE-EeCCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCC--CceEEEEEeCCceEEEe
Q 001314 137 --------------TALV-IDGSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSS--KNCLAAILSDGCLCVVD 198 (1102)
Q Consensus 137 --------------~vaV-IDG~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~--~~~~a~vl~~~~l~l~~ 198 (1102)
.++. -+..+|++=.++... +......+. -...|.+|+|+++.. .+.|+..-.|+++.+|+
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDG--QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTS--CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCC--ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 1111 011123332222110 001111222 245799999998752 24677778899999999
Q ss_pred cCCCCccccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 199 LPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 199 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
........ ...... ...-+.+..++|..++.+++.
T Consensus 245 ~~~~~~~~-~~~~~~-------~~~~~~v~~v~~sp~g~~las 279 (316)
T 3bg1_A 245 CDDASSNT-WSPKLL-------HKFNDVVWHVSWSITANILAV 279 (316)
T ss_dssp CSSTTCCC-CBCCEE-------EECSSCEEEEEECTTTCCEEE
T ss_pred ccCccccc-hhhhhh-------hcCCCcEEEEEEcCCCCEEEE
Confidence 75421100 000001 111245777888877766654
No 56
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=97.89 E-value=0.00086 Score=79.58 Aligned_cols=200 Identities=14% Similarity=0.150 Sum_probs=121.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
+++|.|.|.+||+.. .+..|.+|+++|-....+.-. ...|..++|++||..||... ....|++|..+.
T Consensus 349 ~~~~s~~g~~l~~~~------~dg~v~~~~~~~~~~~~~~~~---~~~v~~~~~s~dg~~l~~~~---~d~~v~~~~~~~ 416 (577)
T 2ymu_A 349 GVAFSPDGQTIASAS------DDKTVKLWNRNGQLLQTLTGH---SSSVRGVAFSPDGQTIASAS---DDKTVKLWNRNG 416 (577)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTCCEEEEEECC---SSCEEEEEECTTSSCEEEEE---TTSEEEEECTTC
T ss_pred EEEECCCCCEEEEEe------CCCEEEEEcCCCCEEEEecCC---CCCeEEEEECCCCCEEEEEe---CCCEEEEEeCCC
Confidence 478999999999876 356899999998665554332 33699999999999999864 235799998643
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE--------------Eeeeec-CCcEEEEE-eCCeE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI--------------WTTAVM-ENSTALVI-DGSKI 146 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~--------------w~~~~~-d~~~vaVI-DG~~l 146 (1102)
. +-+.+. +.... .++.|+|...+ |+.+..+|.+.+++.. ..++.+ |...+++. +..+|
T Consensus 417 -~--~~~~~~-~~~~~v~~~~~s~d~~~-l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i 491 (577)
T 2ymu_A 417 -Q--LLQTLT-GHSSSVWGVAFSPDDQT-IASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 491 (577)
T ss_dssp -C--EEEEEE-CCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred -C--EEEEec-CCCCCeEEEEECCCCCE-EEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEE
Confidence 2 123332 12233 35899997765 7776777777665421 111122 33344432 22345
Q ss_pred EeccCCCCCCCCccccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccC
Q 001314 147 LVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFG 225 (1102)
Q Consensus 147 ~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 225 (1102)
++=......+ ..+ .-..+|.+|+|++++. .++....|+++.+|+.+. .. .. . .....+
T Consensus 492 ~iw~~~~~~~------~~~~~h~~~v~~l~~s~dg~--~l~s~~~dg~v~lwd~~~-~~--------~~---~-~~~h~~ 550 (577)
T 2ymu_A 492 KLWNRNGQLL------QTLTGHSSSVRGVAFSPDGQ--TIASASDDKTVKLWNRNG-QL--------LQ---T-LTGHSS 550 (577)
T ss_dssp EEEETTSCEE------EEEECCSSCEEEEEECTTSS--CEEEEETTSEEEEECTTS-CE--------EE---E-EECCSS
T ss_pred EEEcCCCCEE------EEEeCCCCCEEEEEEcCCCC--EEEEEECcCEEEEEeCCC-CE--------EE---E-EcCCCC
Confidence 5544322211 111 1246799999998754 567767889999998531 11 10 0 012234
Q ss_pred ceEEEEEecCceEEEE
Q 001314 226 SVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 226 ~~~~~~w~~~~~ll~~ 241 (1102)
.+..++|..++..++.
T Consensus 551 ~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 551 SVWGVAFSPDGQTIAS 566 (577)
T ss_dssp CEEEEEECTTSSCEEE
T ss_pred CEEEEEEcCCCCEEEE
Confidence 6777888877765543
No 57
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.88 E-value=0.00073 Score=74.84 Aligned_cols=180 Identities=16% Similarity=0.277 Sum_probs=112.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc-eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE-RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr-hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.|.|++||+.. .+..|.+|+-+..+ ...+.+.. ....|..+.|++|+..||+.. ....|.+|...
T Consensus 57 ~~~~~~~~~~l~~~~------~dg~i~vwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~---~d~~v~i~d~~ 126 (372)
T 1k8k_C 57 GVDWAPDSNRIVTCG------TDRNAYVWTLKGRTWKPTLVILR-INRAARCVRWAPNEKKFAVGS---GSRVISICYFE 126 (372)
T ss_dssp EEEEETTTTEEEEEE------TTSCEEEEEEETTEEEEEEECCC-CSSCEEEEEECTTSSEEEEEE---TTSSEEEEEEE
T ss_pred EEEEeCCCCEEEEEc------CCCeEEEEECCCCeeeeeEEeec-CCCceeEEEECCCCCEEEEEe---CCCEEEEEEec
Confidence 589999999999876 24578888854332 23333332 234699999999999999875 23579999877
Q ss_pred cce-EEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE---------------------------------
Q 001314 83 NNH-WYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI--------------------------------- 127 (1102)
Q Consensus 83 NYH-WYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~--------------------------------- 127 (1102)
.-. |.+...+..+.... .++.|+|...+ |+.++.+|.+.+++..
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 205 (372)
T 1k8k_C 127 QENDWWVCKHIKKPIRSTVLSLDWHPNSVL-LAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 205 (372)
T ss_dssp TTTTEEEEEEECTTCCSCEEEEEECTTSSE-EEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE
T ss_pred CCCcceeeeeeecccCCCeeEEEEcCCCCE-EEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE
Confidence 644 55555554333334 46999997655 7887888988887731
Q ss_pred Eeeeec-CCcEEEEEe-CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 128 WTTAVM-ENSTALVID-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 128 w~~~~~-d~~~vaVID-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
..+..+ +...+++.. ..+|.+-.++.. -++.... .-..+|.+++|++++. +.+.-.++.+.+|++..
T Consensus 206 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~-~~~~~v~~~~~~~~~~---~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 206 HGVCFSANGSRVAWVSHDSTVCLADADKK---MAVATLA-SETLPLLAVTFITESS---LVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEEECSSSSEEEEEETTTEEEEEEGGGT---TEEEEEE-CSSCCEEEEEEEETTE---EEEEETTSSCEEEEEET
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCC---ceeEEEc-cCCCCeEEEEEecCCC---EEEEEeCCeEEEEEccC
Confidence 011111 222333322 234555554432 1222211 1244789999998642 34445899999999754
No 58
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.0023 Score=68.80 Aligned_cols=201 Identities=11% Similarity=0.054 Sum_probs=116.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce-eeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++| |.|++||+.. .+..|.+|+-++.+. ..+.. ....|..++|++|+..|++.. ....|.+|...
T Consensus 23 ~~~~-~~~~~l~s~~------~dg~v~vw~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~---~dg~i~~~~~~ 89 (313)
T 3odt_A 23 DVVA-VDDSKVASVS------RDGTVRLWSKDDQWLGTVVYT---GQGFLNSVCYDSEKELLLFGG---KDTMINGVPLF 89 (313)
T ss_dssp EEEE-EETTEEEEEE------TTSEEEEEEESSSEEEEEEEE---CSSCEEEEEEETTTTEEEEEE---TTSCEEEEETT
T ss_pred EEEe-cCCCEEEEEE------cCCcEEEEECCCCEEEEEeec---CCccEEEEEECCCCCEEEEec---CCCeEEEEEee
Confidence 5789 9999999876 356899998655432 22221 234699999999999999875 24579999876
Q ss_pred cce-EEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE---Eeeee-----------c-CCcEEEEEe-CC
Q 001314 83 NNH-WYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI---WTTAV-----------M-ENSTALVID-GS 144 (1102)
Q Consensus 83 NYH-WYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~---w~~~~-----------~-d~~~vaVID-G~ 144 (1102)
+.. .-....+. +.... .++.|++ -.|+.++.+|.+.+++-. +.... + +...+++.. ..
T Consensus 90 ~~~~~~~~~~~~-~~~~~i~~~~~~~---~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 90 ATSGEDPLYTLI-GHQGNVCSLSFQD---GVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp CCTTSCC-CEEC-CCSSCEEEEEEET---TEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred ecCCCCcccchh-hcccCEEEEEecC---CEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence 642 00011111 11222 3578843 347777777877766511 00000 1 222222211 12
Q ss_pred eEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeecccccc
Q 001314 145 KILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAF 224 (1102)
Q Consensus 145 ~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 224 (1102)
+|.+-. ...+...........|.+++|++++. +++...++.+.+|++........+ ....
T Consensus 166 ~i~i~d-----~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~dg~i~i~d~~~~~~~~~~------------~~~~ 225 (313)
T 3odt_A 166 TIKLWQ-----NDKVIKTFSGIHNDVVRHLAVVDDGH---FISCSNDGLIKLVDMHTGDVLRTY------------EGHE 225 (313)
T ss_dssp CEEEEE-----TTEEEEEECSSCSSCEEEEEEEETTE---EEEEETTSEEEEEETTTCCEEEEE------------ECCS
T ss_pred CEEEEe-----cCceEEEEeccCcccEEEEEEcCCCe---EEEccCCCeEEEEECCchhhhhhh------------hcCC
Confidence 233332 22333334444677899999998653 677788999999998643221111 1223
Q ss_pred CceEEEEEecCceEEEE
Q 001314 225 GSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 225 ~~~~~~~w~~~~~ll~~ 241 (1102)
+.+..+.|..++.++..
T Consensus 226 ~~i~~~~~~~~~~l~~~ 242 (313)
T 3odt_A 226 SFVYCIKLLPNGDIVSC 242 (313)
T ss_dssp SCEEEEEECTTSCEEEE
T ss_pred ceEEEEEEecCCCEEEE
Confidence 45777888877765543
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.87 E-value=0.00082 Score=76.19 Aligned_cols=216 Identities=12% Similarity=0.063 Sum_probs=126.8
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+- +|-....|. . ....|..++|++|+..|+... ....|.+|...
T Consensus 144 ~~~~~~~~~~l~s~s------~d~~i~iwd~~~~~~~~~~~--~-h~~~v~~~~~~~~~~~l~s~~---~d~~v~iwd~~ 211 (420)
T 3vl1_A 144 KLKFFPSGEALISSS------QDMQLKIWSVKDGSNPRTLI--G-HRATVTDIAIIDRGRNVLSAS---LDGTIRLWECG 211 (420)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTTCCCCEEEE--C-CSSCEEEEEEETTTTEEEEEE---TTSCEEEEETT
T ss_pred EEEECCCCCEEEEEe------CCCeEEEEeCCCCcCceEEc--C-CCCcEEEEEEcCCCCEEEEEc---CCCcEEEeECC
Confidence 589999999999876 3568999984 344433432 2 234699999999999999764 23469999988
Q ss_pred cceEEEEEEEEecc--C---------------------CC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----------
Q 001314 83 NNHWYLKYEIRYLR--R---------------------DG-IRFMWHPTKPLQLICWTLDGQITTYNFI----------- 127 (1102)
Q Consensus 83 NYHWYLKqei~~~~--~---------------------~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~----------- 127 (1102)
+.. ..+.+.... . .. .++.|+|...+ |++++.+|.+.+++..
T Consensus 212 ~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 212 TGT--TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY-VIAGHVSGVITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp TTE--EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE-EEEEETTSCEEEEETTTCCEEEEECCT
T ss_pred CCc--eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE-EEEEcCCCeEEEEECCCCceeEEcccc
Confidence 765 222332211 0 11 23567776555 7777888888877642
Q ss_pred -----Eeeeec-CCc-EEEEEe-CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEec
Q 001314 128 -----WTTAVM-ENS-TALVID-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDL 199 (1102)
Q Consensus 128 -----w~~~~~-d~~-~vaVID-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~ 199 (1102)
+.+..+ +.. .+++-. ..+|.+-.++... .|+......-..+|..++|.+ + ..+++...++++.+|.+
T Consensus 289 ~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~--~~~~~~~~~~~~~v~~~~~~~-~--~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 289 FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE--CPVGEFLINEGTPINNVYFAA-G--ALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEEESTTSCEEEEEEET-T--EEEEEETTTEEEEEEEE
T ss_pred cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc--CchhhhhccCCCCceEEEeCC-C--CEEEEecCCccEEEEec
Confidence 111112 223 444433 3467777776642 234333333466788886653 2 35666567889999998
Q ss_pred CCCCccccccCCceeeeeeccccccCceEEEEEecCce----EEEEE
Q 001314 200 PAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHL----LLSVS 242 (1102)
Q Consensus 200 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~----ll~~~ 242 (1102)
..+..+..+..... +.......+.+..++|..++. ++++.
T Consensus 364 ~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 364 SDPESERPAIEFET---PTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp CCTTCCSCEECTTS---CEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred cCCCCCccceeccC---ccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 76443321110000 001112334677788876665 66653
No 60
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.85 E-value=0.0038 Score=70.34 Aligned_cols=189 Identities=15% Similarity=0.133 Sum_probs=99.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceee-eecCC-ccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSS-FDINE-QIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhge-F~L~~-~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|.+||+.......-=...+-+|+.-...+.+ +.... ..+..|..++|++|+.+++-- ....|+||..
T Consensus 35 ~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~l~~~s----~dg~v~lWd~ 110 (344)
T 4gqb_B 35 AARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGERGILVAS----DSGAVELWEL 110 (344)
T ss_dssp EEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTTEEEEEE----TTSEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCCeEEEEE----CCCEEEEEec
Confidence 57899999999987632100001234455432111111 11100 113359999999998665432 2458999998
Q ss_pred ccceEEEEEEEEe-ccCCCc-eEEecCCCCceEEEEeeCCcEEEEEEE---------------Eeeeec-CC-cEEEE-E
Q 001314 82 SNNHWYLKYEIRY-LRRDGI-RFMWHPTKPLQLICWTLDGQITTYNFI---------------WTTAVM-EN-STALV-I 141 (1102)
Q Consensus 82 ~NYHWYLKqei~~-~~~~~~-~~~W~~e~pl~L~i~t~~g~~~~~~~~---------------w~~~~~-d~-~~vaV-I 141 (1102)
....-........ +..+.+ ++.|+|...+ |+.+..+|.+.+.+.. +.+..+ +. ..++. -
T Consensus 111 ~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~-l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s 189 (344)
T 4gqb_B 111 DENETLIVSKFCKYEHDDIVSTVSVLSSGTQ-AVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCS 189 (344)
T ss_dssp CTTSSCEEEEEEEECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred cCCCceeEeeccccCCCCCEEEEEECCCCCE-EEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeec
Confidence 7654222222222 223344 5899997765 7777778888765432 011111 11 12222 2
Q ss_pred eCCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 142 DGSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 142 DG~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
+-.+|++=.++. +-|....... -...+.+++|++.+. +.++.-..|+++.+|++..
T Consensus 190 ~D~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~-~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 190 EDNRILLWDTRC---PKPASQIGCSAPGYLPTSLAWHPQQS-EVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp TTSCEEEEETTS---SSCEEECC----CCCEEEEEECSSCT-TEEEEEETTSEEEEEESCC
T ss_pred cccccccccccc---cceeeeeecceeeccceeeeecCCCC-cceEEeccCCcEEEEECCC
Confidence 223455555544 2222222211 233578999988654 3455556789999998754
No 61
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.83 E-value=0.003 Score=70.30 Aligned_cols=207 Identities=9% Similarity=0.049 Sum_probs=117.8
Q ss_pred ceee-----cc-CCCeEEEEeeccCCCCCCeEEEEecCCcc-eeee-----ecCCccccceeeeeecCCCCeEEEEEeeC
Q 001314 4 VLEW-----MP-SGANIAAVYDRKSENKCPSIVFYERNGLE-RSSF-----DINEQIDSTVELLKWNCMSDLLAAVVRFE 71 (1102)
Q Consensus 4 ~LsW-----rP-sGnlIA~~qr~~~~~~~~~VvFFERNGLr-hgeF-----~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~ 71 (1102)
+++| .| .|++||+.. .+..|.+|+-+... .+.+ .+.+. ...|..++|++|+.+|+..-
T Consensus 26 ~~~~~~s~~~~~d~~~l~sgs------~D~~v~iWd~~~~~~~~~~~~~~~~l~~h-~~~V~~~~~~~~~~~l~s~s--- 95 (343)
T 2xzm_R 26 SIVAGFSQKENEDSPVLISGS------RDKTVMIWKLYEEEQNGYFGIPHKALTGH-NHFVSDLALSQENCFAISSS--- 95 (343)
T ss_dssp EEEECCCSSTTCCCCEEEEEE------TTSCEEEEEECSSCCSSBSEEEEEEECCC-SSCEEEEEECSSTTEEEEEE---
T ss_pred heeeEEEeecCCCCCEEEEEc------CCCEEEEEECCcCCcccccccccchhccC-CCceEEEEECCCCCEEEEEc---
Confidence 4677 56 899999976 35689999854322 1111 22322 23699999999999988653
Q ss_pred CCCeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE----Ee-------------eeec
Q 001314 72 EYDSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI----WT-------------TAVM 133 (1102)
Q Consensus 72 ~~~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~----w~-------------~~~~ 133 (1102)
....|.||...+.... +.+. +.... .++.|+|.... |+.+..+|.+.+++.. .. +..+
T Consensus 96 ~D~~v~lwd~~~~~~~--~~~~-~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~ 171 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTY--KRFV-GHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYS 171 (343)
T ss_dssp TTSEEEEEETTSSCEE--EEEE-CCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEEC
T ss_pred CCCcEEEEECCCCcEE--EEEc-CCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeec
Confidence 2458999998876532 2222 22233 46899998765 7777778888776531 00 0000
Q ss_pred CC-----------cEEEE-EeCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 134 EN-----------STALV-IDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 134 d~-----------~~vaV-IDG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
.+ ..++. -...+|++-..+.. +. ..-..-..+|.+++|++++. .++....|+++.+|++..
T Consensus 172 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~--~~~~~h~~~v~~~~~s~~g~--~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 172 PIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ---IR--YTFKAHESNVNHLSISPNGK--YIATGGKDKKLLIWDILN 244 (343)
T ss_dssp CCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE---EE--EEEECCSSCEEEEEECTTSS--EEEEEETTCEEEEEESSC
T ss_pred cccccccccCCCCCEEEEEcCCCEEEEEcCCCc---ee--EEEcCccccceEEEECCCCC--EEEEEcCCCeEEEEECCC
Confidence 00 11221 11223333331110 00 01112356799999998653 567767899999999743
Q ss_pred CCccccccCCceeeeeeccccccCceEEEEEecCceEEEEEe
Q 001314 202 PDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSVSH 243 (1102)
Q Consensus 202 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~~~ 243 (1102)
..... ..+ ..-..+..++|..++.++++..
T Consensus 245 ~~~~~----~~~--------~~~~~v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 245 LTYPQ----REF--------DAGSTINQIAFNPKLQWVAVGT 274 (343)
T ss_dssp CSSCS----EEE--------ECSSCEEEEEECSSSCEEEEEE
T ss_pred Ccccc----eee--------cCCCcEEEEEECCCCCEEEEEC
Confidence 22110 001 0112467788887777776543
No 62
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.83 E-value=0.0017 Score=73.00 Aligned_cols=110 Identities=6% Similarity=0.067 Sum_probs=78.7
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.| .|++||+.. .+..|.+|+-+|-....|.-.......|..++|++|+..|+... ....|.+|+..
T Consensus 123 ~~~~~~~~~~~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~~ 193 (383)
T 3ei3_B 123 GMKFNQFNTNQLFVSS------IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD---STGRLLLLGLD 193 (383)
T ss_dssp EEEEETTEEEEEEEEE------TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE---TTSEEEEEETT
T ss_pred EEEeCCCCCCEEEEEe------CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC---CCCCEEEEECC
Confidence 589999 789999876 35789999998865555544432335699999999999999875 34589999985
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEE
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNF 126 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~ 126 (1102)
.-. .+.+.. .... .++.|+|..+..|+.+..+|.+.+++.
T Consensus 194 ~~~---~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 234 (383)
T 3ei3_B 194 GHE---IFKEKL-HKAKVTHAEFNPRCDWLMATSSVDATVKLWDL 234 (383)
T ss_dssp SCE---EEEEEC-SSSCEEEEEECSSCTTEEEEEETTSEEEEEEG
T ss_pred CCE---EEEecc-CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeC
Confidence 432 222221 2233 469999999855777777887777654
No 63
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.83 E-value=0.00098 Score=76.97 Aligned_cols=222 Identities=11% Similarity=0.110 Sum_probs=130.8
Q ss_pred ceeeccC-CCeEEEEeeccCCCCCCeEEEEecCCc---------ceeeeecCCccccceeeeeecCCCC-eEEEEEeeCC
Q 001314 4 VLEWMPS-GANIAAVYDRKSENKCPSIVFYERNGL---------ERSSFDINEQIDSTVELLKWNCMSD-LLAAVVRFEE 72 (1102)
Q Consensus 4 ~LsWrPs-GnlIA~~qr~~~~~~~~~VvFFERNGL---------rhgeF~L~~~~~~~v~~L~Wn~DS~-iLAv~~~~~~ 72 (1102)
.++|.|+ |++||+.. ....|.+|.-+.. ..-.+.++.. ...|..|+|++++. +|+... .
T Consensus 133 ~l~~~p~~~~~lat~~------~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~---~ 202 (430)
T 2xyi_A 133 RARYMPQNACVIATKT------PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH-QKEGYGLSWNPNLNGYLLSAS---D 202 (430)
T ss_dssp EEEEETTEEEEEEEEC------SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC-SSCCCCEEECTTSTTEEEEEC---T
T ss_pred EEEECCCCCcEEEEEC------CCCcEEEEECCCcccccCccccCCCcEEecCC-CCCeEEEEeCCCCCCeEEEEe---C
Confidence 5899997 78888875 3457999987531 1222333332 23689999999999 877653 3
Q ss_pred CCeEEEEEccc---ceEEEEEEEEeccCC-C-ceEEecCCCCceEEEEeeCCcEEEEEEEEe--------ee--------
Q 001314 73 YDSVKICFFSN---NHWYLKYEIRYLRRD-G-IRFMWHPTKPLQLICWTLDGQITTYNFIWT--------TA-------- 131 (1102)
Q Consensus 73 ~~~vqLWt~~N---YHWYLKqei~~~~~~-~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~--------~~-------- 131 (1102)
...|.+|.... -++.++....+.... . .++.|+|..+..|+.++.+|.+.+++..-. ..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~ 282 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNC 282 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEE
T ss_pred CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEE
Confidence 45799999987 344443333332222 3 358999977776888788888888775411 10
Q ss_pred --ec-CCc-EEEE-EeCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccc
Q 001314 132 --VM-ENS-TALV-IDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLE 206 (1102)
Q Consensus 132 --~~-d~~-~vaV-IDG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~ 206 (1102)
.+ +.. .+++ -+..+|.+-.++... .|+.... .-...|.+|+|++++. ..+++...++++.+|.+.......
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~--~~~~~~~-~h~~~v~~i~~sp~~~-~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLK--LKLHSFE-SHKDEIFQVQWSPHNE-TILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTT--SCSEEEE-CCSSCEEEEEECSSCT-TEEEEEETTSCCEEEEGGGTTCCC
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCC--CCeEEee-cCCCCEEEEEECCCCC-CEEEEEeCCCcEEEEeCCCCcccc
Confidence 11 222 3333 233457777777532 2222222 1356899999998754 356666788999999986422110
Q ss_pred cc----cCCceeeeeeccccccCceEEEEEecCce-EEEE
Q 001314 207 DL----EGTEFVVEACISETAFGSVIHLIWLGSHL-LLSV 241 (1102)
Q Consensus 207 ~l----~~~~~~~~~~~~~~~~~~~~~~~w~~~~~-ll~~ 241 (1102)
.. .+. .... ......-+.+..++|..++. +++.
T Consensus 359 ~~~~~~~~~-~~~~-~~~~~h~~~v~~~~~~p~~~~~l~s 396 (430)
T 2xyi_A 359 STEDAEDGP-PELL-FIHGGHTAKISDFSWNPNEPWIICS 396 (430)
T ss_dssp CHHHHHHCC-TTEE-EECCCCSSCEEEEEECSSSTTEEEE
T ss_pred CccccccCC-cceE-EEcCCCCCCceEEEECCCCCCEEEE
Confidence 00 000 0000 00112234688899987776 5543
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.83 E-value=0.0012 Score=74.67 Aligned_cols=187 Identities=10% Similarity=0.081 Sum_probs=115.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCcc---------------------ccceeeeeecCCC
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQI---------------------DSTVELLKWNCMS 61 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~---------------------~~~v~~L~Wn~DS 61 (1102)
+++|.|.|++||+.. .+..|.+|+ +.|-....|..+... ...+..++|++|+
T Consensus 186 ~~~~~~~~~~l~s~~------~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 186 DIAIIDRGRNVLSAS------LDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp EEEEETTTTEEEEEE------TTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred EEEEcCCCCEEEEEc------CCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 589999999999876 346788998 556666666543211 1346778899999
Q ss_pred CeEEEEEeeCCCCeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEE------eee---
Q 001314 62 DLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIW------TTA--- 131 (1102)
Q Consensus 62 ~iLAv~~~~~~~~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w------~~~--- 131 (1102)
..|++.. ....|.+|...+..- ...+....... .++.|+|.....|+.++.+|.+.+++..- ...
T Consensus 260 ~~l~~~~---~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~ 334 (420)
T 3vl1_A 260 KYVIAGH---VSGVITVHNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE 334 (420)
T ss_dssp EEEEEEE---TTSCEEEEETTTCCE--EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST
T ss_pred CEEEEEc---CCCeEEEEECCCCce--eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC
Confidence 9998875 244799999987651 12221111223 46999999985588888888888766431 000
Q ss_pred --------ecCCcEEEEEe-CCeEEeccCCCCCCCCccc-----ccccccCCceeEEEEecCCCC-ceEEEEEeCCceEE
Q 001314 132 --------VMENSTALVID-GSKILVTPLSLSLMPPPMY-----LFSLKFPTAVTEMAFYSKSSK-NCLAAILSDGCLCV 196 (1102)
Q Consensus 132 --------~~d~~~vaVID-G~~l~lTp~r~a~VPPPM~-----~~~l~~~~~i~~vaf~~~~~~-~~~a~vl~~~~l~l 196 (1102)
.++...++... ..+|++-.+...--|.++. .........|.+++|++++.. ..+.++-.+|.+.+
T Consensus 335 ~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~ 414 (420)
T 3vl1_A 335 GTPINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCAL 414 (420)
T ss_dssp TSCEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEE
T ss_pred CCCceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEE
Confidence 11222333321 1235554444422222211 112344667899999997653 24777788888888
Q ss_pred EecCC
Q 001314 197 VDLPA 201 (1102)
Q Consensus 197 ~~~~~ 201 (1102)
|++.+
T Consensus 415 ~~~~~ 419 (420)
T 3vl1_A 415 YNLSN 419 (420)
T ss_dssp EESCC
T ss_pred EeccC
Confidence 98753
No 65
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.82 E-value=0.002 Score=73.04 Aligned_cols=214 Identities=11% Similarity=0.075 Sum_probs=110.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEe-------------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVR------------- 69 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~------------- 69 (1102)
+++|.|.|++||+.. .+..|.+|+-. |.....|... ...|..++|++||..||..-.
T Consensus 71 ~~~~sp~~~~l~s~s------~D~~v~iWd~~~~~~~~~~~~h---~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 71 SLDWTPEKNWIVSAS------QDGRLIVWNALTSQKTHAIKLH---CPWVMECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp EEEECTTSSCEEEEE------TTSEEEEEETTTTEEEEEEECC---CTTCCCCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred EEEEcCCCCEEEEEe------CCCeEEEEECCCCccceEEecC---CCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 589999999999986 35689999853 3333333322 224777788888877774310
Q ss_pred ----------------------------------eCCCCeEEEEEcccceEEEEEEE--Ee--ccCCC-ceEEecCCCCc
Q 001314 70 ----------------------------------FEEYDSVKICFFSNNHWYLKYEI--RY--LRRDG-IRFMWHPTKPL 110 (1102)
Q Consensus 70 ----------------------------------~~~~~~vqLWt~~NYHWYLKqei--~~--~~~~~-~~~~W~~e~pl 110 (1102)
......|.+|...+-.- ...+ .+ +.... .++.|++.++.
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~ 219 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQR--ISIFGSEFPSGHTADVLSLSINSLNAN 219 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCE--EEEECCCSSSSCCSCEEEEEECSSSCC
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcE--EEEeecccCCCCccCeEEEEeecCCCC
Confidence 01112566666655431 0111 01 11111 34677776666
Q ss_pred eEEEEeeCCcEEEEEEE----------------Eeeeec-CCcEEEE-EeCCeEEeccCCCCCCCCccccccc------c
Q 001314 111 QLICWTLDGQITTYNFI----------------WTTAVM-ENSTALV-IDGSKILVTPLSLSLMPPPMYLFSL------K 166 (1102)
Q Consensus 111 ~L~i~t~~g~~~~~~~~----------------w~~~~~-d~~~vaV-IDG~~l~lTp~r~a~VPPPM~~~~l------~ 166 (1102)
.|+.+..+|.+.+++.. +.+..+ |...++. -+-.+|++=.++... ++..+.. .
T Consensus 220 ~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~---~~~~~~~~~~~~~~ 296 (380)
T 3iz6_a 220 MFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH---QLQVYNREPDRNDN 296 (380)
T ss_dssp EEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE---EEEEECCCCSSSCC
T ss_pred EEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc---EEEEeccccccccc
Confidence 57777777777765532 001111 1112211 111234444433310 1110000 0
Q ss_pred cCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 167 FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 167 ~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
....|..++|++++. .+++-..++.+.+|+.........+. .......+.+..+.|..++..++.
T Consensus 297 ~~~~v~~~~~s~~g~--~l~~g~~dg~i~vwd~~~~~~~~~~~--------~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 297 ELPIVTSVAFSISGR--LLFAGYSNGDCYVWDTLLAEMVLNLG--------TLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp SSCSCSEEEECSSSS--EEEEECTTSCEEEEETTTCCEEEEEC--------CSCSSCCCCCCEEEECSSSSEEEE
T ss_pred ccCceEEEEECCCCC--EEEEEECCCCEEEEECCCCceEEEEe--------cccCCCCCceEEEEECCCCCEEEE
Confidence 112378999998754 56676789999999875432221110 001122345677888877776654
No 66
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.82 E-value=0.0033 Score=74.65 Aligned_cols=171 Identities=17% Similarity=0.160 Sum_probs=103.2
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecC-C----cceeeeecCCccccc-eeeeeecC--CCCeEEEEEeeCCCC
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERN-G----LERSSFDINEQIDST-VELLKWNC--MSDLLAAVVRFEEYD 74 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-G----LrhgeF~L~~~~~~~-v~~L~Wn~--DS~iLAv~~~~~~~~ 74 (1102)
.+++|.|.|++||+.. ...|.+|+-. | -....| ++. ... |..++|++ |+..||..- ...
T Consensus 22 ~~~~~spdg~~l~~~~-------~~~v~v~~~~~~~~~~~~~~~~--~~h-~~~~v~~~~~sp~~~~~~l~s~~---~dg 88 (615)
T 1pgu_A 22 THLSYDPTTNAIAYPC-------GKSAFVRCLDDGDSKVPPVVQF--TGH-GSSVVTTVKFSPIKGSQYLCSGD---ESG 88 (615)
T ss_dssp CCCEEETTTTEEEEEE-------TTEEEEEECCSSCCSSCSEEEE--CTT-TTSCEEEEEECSSTTCCEEEEEE---TTS
T ss_pred eEEEECCCCCEEEEec-------CCeEEEEECCCCCCccccceEE--ecC-CCceEEEEEECcCCCCCEEEEec---CCC
Confidence 3689999999999986 2479999865 3 233333 332 235 99999999 999999875 245
Q ss_pred eEEEEEcccc------eEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeC----CcEEEE-----------------EE
Q 001314 75 SVKICFFSNN------HWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLD----GQITTY-----------------NF 126 (1102)
Q Consensus 75 ~vqLWt~~NY------HWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~----g~~~~~-----------------~~ 126 (1102)
.|++|...+- ..-+.+++... ... .++.|+|.... |++++.+ |.+..+ ..
T Consensus 89 ~v~vw~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~-l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 89 KVIVWGWTFDKESNSVEVNVKSEFQVL-AGPISDISWDFEGRR-LCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINAC 166 (615)
T ss_dssp EEEEEEEEEEGGGTEEEEEEEEEEECC-SSCEEEEEECTTSSE-EEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEE
T ss_pred EEEEEeCCCCcccccccccccchhhcc-cccEEEEEEeCCCCE-EEEeccCCCCccEEEEEECCCcceeeecCCccEEEE
Confidence 8999999755 44445555432 223 45899998766 5554433 222211 11
Q ss_pred EEeee-------ecCCcEEEEEeCCeEEeccCCCCCCCCcccccccc-cCC---ceeEEEEecCCCCceEEEEEeCCceE
Q 001314 127 IWTTA-------VMENSTALVIDGSKILVTPLSLSLMPPPMYLFSLK-FPT---AVTEMAFYSKSSKNCLAAILSDGCLC 195 (1102)
Q Consensus 127 ~w~~~-------~~d~~~vaVIDG~~l~lTp~r~a~VPPPM~~~~l~-~~~---~i~~vaf~~~~~~~~~a~vl~~~~l~ 195 (1102)
.|..+ ++.++.|.|.|..+-. ....+. -.. +|.+++|++++. +.+++...++.+.
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~~~-------------~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPPFK-------------FSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKIS 232 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTTBE-------------EEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEE
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCCcc-------------eeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEE
Confidence 12111 1233444444422111 111222 233 699999998622 3566667899999
Q ss_pred EEecCCC
Q 001314 196 VVDLPAP 202 (1102)
Q Consensus 196 l~~~~~~ 202 (1102)
+|++...
T Consensus 233 vwd~~~~ 239 (615)
T 1pgu_A 233 CFDGKSG 239 (615)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 9998643
No 67
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.81 E-value=0.00054 Score=83.21 Aligned_cols=184 Identities=13% Similarity=0.130 Sum_probs=109.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCC-CCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEE-YDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~-~~~vqLWt~ 81 (1102)
+++|.|.|++||+.. .+..|.+|+- +|-..-..+++.. ...|..++|++||..||..-.... ...|.+|.+
T Consensus 64 ~~~~spdg~~lasg~------~d~~v~lWd~~~~~~~~~~~~~~~-~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~ 136 (611)
T 1nr0_A 64 VAKTSPSGYYCASGD------VHGNVRIWDTTQTTHILKTTIPVF-SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT 136 (611)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEESSSTTCCEEEEEECS-SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT
T ss_pred EEEECCCCcEEEEEe------CCCCEEEeECCCCcceeeEeeccc-CCceEEEEECCCCCEEEEEECCCCceeEEEEeeC
Confidence 589999999999987 3578999986 3322222334432 236999999999999998753211 137999987
Q ss_pred ccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEE---------------EEeeeec-CCcEEEEE-eC
Q 001314 82 SNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNF---------------IWTTAVM-ENSTALVI-DG 143 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~---------------~w~~~~~-d~~~vaVI-DG 143 (1102)
++-. .++. +.... .++.|+|..+.+|+.+..+|.+.+++. .+.+..+ |...++.- .-
T Consensus 137 ~~~~----~~l~-gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 137 GTSN----GNLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp CCBC----BCCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCc----ceec-CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECC
Confidence 6532 1111 11223 358999998887888777887776551 1222222 22222221 11
Q ss_pred CeEEeccCCCCCCCCcc---cccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 144 SKILVTPLSLSLMPPPM---YLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 144 ~~l~lTp~r~a~VPPPM---~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
.+|++-.++.......+ ......-...|.+|+|++++. .++..-.|+++.+|++..
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~--~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT--KIASASADKTIKIWNVAT 270 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS--EEEEEETTSEEEEEETTT
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC--EEEEEeCCCeEEEEeCCC
Confidence 22343333221100000 001112456899999998653 566667889999999764
No 68
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.80 E-value=0.0011 Score=75.39 Aligned_cols=181 Identities=10% Similarity=0.108 Sum_probs=114.8
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCcc------eeeeecCCccccceeeeeecCCC-CeEEEEEeeCCCCe
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGLE------RSSFDINEQIDSTVELLKWNCMS-DLLAAVVRFEEYDS 75 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGLr------hgeF~L~~~~~~~v~~L~Wn~DS-~iLAv~~~~~~~~~ 75 (1102)
.++|.| .|++||+.. .+..|.+|+-+... .-...+.+ ....|..++|++|+ .+|+..- ....
T Consensus 86 ~~~~~p~~~~~l~s~s------~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~---~dg~ 155 (402)
T 2aq5_A 86 DIAWCPHNDNVIASGS------EDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAG---CDNV 155 (402)
T ss_dssp EEEECTTCTTEEEEEE------TTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEE---TTSC
T ss_pred EEEeCCCCCCEEEEEe------CCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEEEEc---CCCE
Confidence 589999 999999986 35689999854321 11112222 23469999999998 6888764 2347
Q ss_pred EEEEEcccceEEEEEEEE-eccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Eee-e-----------ec-CC
Q 001314 76 VKICFFSNNHWYLKYEIR-YLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTT-A-----------VM-EN 135 (1102)
Q Consensus 76 vqLWt~~NYHWYLKqei~-~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~-~-----------~~-d~ 135 (1102)
|.+|+..+... .+.+. ...... .++.|+|...+ |+.++.+|.+.+++.. ... . .+ |.
T Consensus 156 i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 156 ILVWDVGTGAA--VLTLGPDVHPDTIYSVDWSRDGAL-ICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG 232 (402)
T ss_dssp EEEEETTTTEE--EEEECTTTCCSCEEEEEECTTSSC-EEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT
T ss_pred EEEEECCCCCc--cEEEecCCCCCceEEEEECCCCCE-EEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC
Confidence 99999988752 22221 112233 46899996655 7887888888877632 111 0 11 22
Q ss_pred cEEEEE----eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEE-eCCceEEEecCC
Q 001314 136 STALVI----DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAIL-SDGCLCVVDLPA 201 (1102)
Q Consensus 136 ~~vaVI----DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl-~~~~l~l~~~~~ 201 (1102)
..+++- ...+|.+-.++... .|+....+.....|..++|++++. .+++.- .++.+.+|++..
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~~~--~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLE--EPLSLQELDTSSGVLLPFFDPDTN--IVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCS--SCSEEEECCCCSSCEEEEEETTTT--EEEEEETTCSCEEEEEECS
T ss_pred cEEEEeccCCCCceEEEEcCcccc--CCceEEeccCCCceeEEEEcCCCC--EEEEEEcCCCeEEEEEecC
Confidence 233333 34456666665542 356666666777899999998754 444433 488999999864
No 69
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.79 E-value=0.0026 Score=72.44 Aligned_cols=180 Identities=11% Similarity=0.099 Sum_probs=100.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCC---------------ccccceeeeeecCCCCeEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINE---------------QIDSTVELLKWNCMSDLLAAV 67 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~---------------~~~~~v~~L~Wn~DS~iLAv~ 67 (1102)
+++|.|.|.+||+... ..|.+|+ .+|-....+.-.. ..+..|..++|++|+..||..
T Consensus 69 ~v~fspdg~~la~g~~-------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 69 CVKFSNDGEYLATGCN-------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp EEEECTTSSEEEEECB-------SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred EEEECCCCCEEEEEcC-------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 5899999999998641 2455565 3443333332110 011248899999999999986
Q ss_pred EeeCCCCeEEEEEcccceEEEEEEEEecc-CCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------Ee-------ee
Q 001314 68 VRFEEYDSVKICFFSNNHWYLKYEIRYLR-RDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------WT-------TA 131 (1102)
Q Consensus 68 ~~~~~~~~vqLWt~~NYHWYLKqei~~~~-~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w~-------~~ 131 (1102)
. ....|.+|...+..- ...+.. ... .++.|+|.... |+.++.+|.+.+++.. +. +.
T Consensus 142 ~---~d~~i~iwd~~~~~~----~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~ 213 (393)
T 1erj_A 142 A---EDRLIRIWDIENRKI----VMILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVA 213 (393)
T ss_dssp E---TTSCEEEEETTTTEE----EEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEE
T ss_pred c---CCCeEEEEECCCCcE----EEEEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEE
Confidence 4 245799999988751 112222 223 35899998765 7776777777765431 00 01
Q ss_pred ec--CCcEEEEE-eCCeEEeccCCCCCC----CCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 132 VM--ENSTALVI-DGSKILVTPLSLSLM----PPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 132 ~~--d~~~vaVI-DG~~l~lTp~r~a~V----PPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
.+ |...+++- ...+|.+-.++.... ..+.. ....-...|.+|+|++++. .++....|+++.+|++..
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~~~g~--~l~s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE-SGTGHKDSVYSVVFTRDGQ--SVVSGSLDRSVKLWNLQN 287 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC-------CCCSSCEEEEEECTTSS--EEEEEETTSEEEEEEC--
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeeccccc-CCCCCCCCEEEEEECCCCC--EEEEEeCCCEEEEEECCC
Confidence 11 22222221 112233333332110 00000 0012345789999998653 566667799999999854
No 70
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.00092 Score=77.52 Aligned_cols=111 Identities=7% Similarity=-0.060 Sum_probs=71.2
Q ss_pred ceeeccCCCeE-EEEeeccCCCCCCeEEEEecC---CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEE
Q 001314 4 VLEWMPSGANI-AAVYDRKSENKCPSIVFYERN---GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKIC 79 (1102)
Q Consensus 4 ~LsWrPsGnlI-A~~qr~~~~~~~~~VvFFERN---GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLW 79 (1102)
+++|.|.|++| |+.. .+..|.+|+-+ |-....|.-.. ....|..++|++|+..|++.. ....|.+|
T Consensus 107 ~~~~s~d~~~l~~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~---~~g~v~~~ 176 (450)
T 2vdu_B 107 NLRLTSDESRLIACAD------SDKSLLVFDVDKTSKNVLKLRKRFC-FSKRPNAISIAEDDTTVIIAD---KFGDVYSI 176 (450)
T ss_dssp EEEECTTSSEEEEEEG------GGTEEEEEEECSSSSSCEEEEEEEE-CSSCEEEEEECTTSSEEEEEE---TTSEEEEE
T ss_pred EEEEcCCCCEEEEEEC------CCCeEEEEECcCCCCceeeeeeccc-CCCCceEEEEcCCCCEEEEEe---CCCcEEEE
Confidence 58999999986 6654 24689999865 44444443211 123689999999999999874 24579999
Q ss_pred EcccceEE--EEEEEEeccCCC-ceEEecCC---CCceEEEEeeCCcEEEEEE
Q 001314 80 FFSNNHWY--LKYEIRYLRRDG-IRFMWHPT---KPLQLICWTLDGQITTYNF 126 (1102)
Q Consensus 80 t~~NYHWY--LKqei~~~~~~~-~~~~W~~e---~pl~L~i~t~~g~~~~~~~ 126 (1102)
...+...- .++.+. +.... .++.|+|. ..+ |+.+..+|.+.++++
T Consensus 177 ~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~-l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 177 DINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQF-IITSDRDEHIKISHY 227 (450)
T ss_dssp ETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCEE-EEEEETTSCEEEEEE
T ss_pred ecCCcccccccceeee-cccCceEEEEEcCCCCCCcE-EEEEcCCCcEEEEEC
Confidence 88765521 011111 11223 35899997 433 666667777777665
No 71
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.78 E-value=0.0083 Score=68.83 Aligned_cols=203 Identities=11% Similarity=0.082 Sum_probs=117.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+-. |-... ++++. ...|..++|++|+.+||..- ....|.+|...
T Consensus 113 ~~~~~p~~~~l~s~s------~Dg~i~vwd~~~~~~~~--~l~~h-~~~V~~v~~~~~~~~l~sgs---~D~~i~iwd~~ 180 (410)
T 1vyh_C 113 RVIFHPVFSVMVSAS------EDATIKVWDYETGDFER--TLKGH-TDSVQDISFDHSGKLLASCS---ADMTIKLWDFQ 180 (410)
T ss_dssp EEEECSSSSEEEEEE------SSSCEEEEETTTCCCCE--EECCC-SSCEEEEEECTTSSEEEEEE---TTSCCCEEETT
T ss_pred EEEEcCCCCEEEEEe------CCCeEEEEECCCCcEEE--EEecc-CCcEEEEEEcCCCCEEEEEe---CCCeEEEEeCC
Confidence 578999999999976 35689999854 32222 33332 23699999999999998864 23479999998
Q ss_pred cceEEEEEEEEeccC-CC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------E--------eeeec-CCcEEEE-EeC
Q 001314 83 NNHWYLKYEIRYLRR-DG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------W--------TTAVM-ENSTALV-IDG 143 (1102)
Q Consensus 83 NYHWYLKqei~~~~~-~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w--------~~~~~-d~~~vaV-IDG 143 (1102)
++.- .+. +... .. .++.|+|.... |+.++.+|.+.+++.. + .+..+ |...++. -+.
T Consensus 181 ~~~~--~~~--~~~h~~~V~~v~~~p~~~~-l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 181 GFEC--IRT--MHGHDHNVSSVSIMPNGDH-IVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp SSCE--EEC--CCCCSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCce--eEE--EcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 8651 111 2222 23 35899997665 7777777877765531 1 01111 2222322 122
Q ss_pred CeEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCC------------------CceEEEEEeCCceEEEecCCCCc
Q 001314 144 SKILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSS------------------KNCLAAILSDGCLCVVDLPAPDM 204 (1102)
Q Consensus 144 ~~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~------------------~~~~a~vl~~~~l~l~~~~~~~~ 204 (1102)
.+|++-.++.. -+...+ .-...|.+++|+++.. ...++.-..|+++.+|++.....
T Consensus 256 ~~v~vwd~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~ 330 (410)
T 1vyh_C 256 QTVRVWVVATK-----ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330 (410)
T ss_dssp SCEEEEETTTC-----CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEECCCC-----ceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce
Confidence 34555444332 111122 2345688999988532 23566667788999999754221
Q ss_pred cccccCCceeeeeeccccccCceEEEEEecCceEEE
Q 001314 205 LEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLS 240 (1102)
Q Consensus 205 ~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~ 240 (1102)
...+ ....+.+..+.|..++..++
T Consensus 331 ~~~~------------~~h~~~v~~v~~~~~g~~l~ 354 (410)
T 1vyh_C 331 LMTL------------VGHDNWVRGVLFHSGGKFIL 354 (410)
T ss_dssp EEEE------------ECCSSCEEEEEECSSSSCEE
T ss_pred EEEE------------ECCCCcEEEEEEcCCCCEEE
Confidence 1111 11223466777776665444
No 72
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.77 E-value=0.001 Score=72.99 Aligned_cols=204 Identities=13% Similarity=0.084 Sum_probs=121.4
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeee--cCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKW--NCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~W--n~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
.++|.|.|++||+.. .+..|.+|+-+.-+.-.+ .. ....|..+.| ++|+..|+... ....|.+|..
T Consensus 91 ~~~~~~~~~~l~s~~------~dg~v~iwd~~~~~~~~~--~~-~~~~v~~~~~~~~~~~~~l~~~~---~dg~i~vwd~ 158 (368)
T 3mmy_A 91 DVCWSDDGSKVFTAS------CDKTAKMWDLSSNQAIQI--AQ-HDAPVKTIHWIKAPNYSCVMTGS---WDKTLKFWDT 158 (368)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTTTEEEEE--EE-CSSCEEEEEEEECSSCEEEEEEE---TTSEEEEECS
T ss_pred EEEECcCCCEEEEEc------CCCcEEEEEcCCCCceee--cc-ccCceEEEEEEeCCCCCEEEEcc---CCCcEEEEEC
Confidence 589999999999876 356899998765543332 11 2346999999 99999988765 2457999998
Q ss_pred ccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEEEEEe-----ee--------------e----cCCcEE
Q 001314 82 SNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYNFIWT-----TA--------------V----MENSTA 138 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~-----~~--------------~----~d~~~v 138 (1102)
.+..- .+.+.... ...++.|. .+. +++++.+|.+.++++.-. .. . +.++.+
T Consensus 159 ~~~~~--~~~~~~~~-~~~~~~~~--~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (368)
T 3mmy_A 159 RSSNP--MMVLQLPE-RCYCADVI--YPM-AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFA 232 (368)
T ss_dssp SCSSC--SEEEECSS-CEEEEEEE--TTE-EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEE
T ss_pred CCCcE--EEEEecCC-CceEEEec--CCe-eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEE
Confidence 77652 23333221 11234443 343 666677788877665310 00 0 001133
Q ss_pred EEEeCCeEEeccCCCCCCCCcccccccccCC-------------ceeEEEEecCCCCceEEEEEeCCceEEEecCCCCcc
Q 001314 139 LVIDGSKILVTPLSLSLMPPPMYLFSLKFPT-------------AVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDML 205 (1102)
Q Consensus 139 aVIDG~~l~lTp~r~a~VPPPM~~~~l~~~~-------------~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~ 205 (1102)
+.-+...+.+-.++....+.+. ..+.... +|.+++|++++. .+++...++.+.+|++......
T Consensus 233 ~~~~dg~i~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 233 LGSIEGRVAIHYINPPNPAKDN--FTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG--TLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEETTSEEEEEESSCSCHHHHS--EEEECSEEC----CCCEEECCEEEEEECTTTC--CEEEEETTSCEEEEETTTTEEE
T ss_pred EecCCCcEEEEecCCCCccccc--eeeeeeecccccccccccccceEEEEEecCCC--EEEEEccCCeEEEEECCCCcEE
Confidence 3344455666666553211222 2222222 699999998653 5777778999999998643221
Q ss_pred ccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 206 EDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 206 ~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
..+ ....+.+..++|..++..+++
T Consensus 309 ~~~------------~~~~~~v~~~~~s~~g~~l~~ 332 (368)
T 3mmy_A 309 KTS------------EQLDQPISACCFNHNGNIFAY 332 (368)
T ss_dssp EEC------------CCCSSCEEEEEECTTSSCEEE
T ss_pred EEe------------cCCCCCceEEEECCCCCeEEE
Confidence 111 122346788899877766664
No 73
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.75 E-value=0.0014 Score=72.38 Aligned_cols=178 Identities=14% Similarity=0.105 Sum_probs=112.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCC------CCeEEEEEeeCCCCeEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCM------SDLLAAVVRFEEYDSVK 77 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~D------S~iLAv~~~~~~~~~vq 77 (1102)
+++|.|.|++|++.. .+..|.+|+-+|.....+ .+. ...|..+.|+++ +..|+..- ....|.
T Consensus 112 ~~~~~~~~~~l~s~s------~D~~i~vwd~~~~~~~~~--~~h-~~~v~~~~~~~~~~~~~~~~~l~s~~---~d~~i~ 179 (319)
T 3frx_A 112 SVDIDKKASMIISGS------RDKTIKVWTIKGQCLATL--LGH-NDWVSQVRVVPNEKADDDSVTIISAG---NDKMVK 179 (319)
T ss_dssp EEEECTTSCEEEEEE------TTSCEEEEETTSCEEEEE--CCC-SSCEEEEEECCC------CCEEEEEE---TTSCEE
T ss_pred EEEEcCCCCEEEEEe------CCCeEEEEECCCCeEEEE--ecc-CCcEEEEEEccCCCCCCCccEEEEEe---CCCEEE
Confidence 578999999999976 356899999877554433 222 235888999884 44666543 345799
Q ss_pred EEEcccceEEEEEEEEecc-CCC-ceEEecCCCCceEEEEeeCCcEEEEEEE--------------Eeeeec-CCcEEEE
Q 001314 78 ICFFSNNHWYLKYEIRYLR-RDG-IRFMWHPTKPLQLICWTLDGQITTYNFI--------------WTTAVM-ENSTALV 140 (1102)
Q Consensus 78 LWt~~NYHWYLKqei~~~~-~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~--------------w~~~~~-d~~~vaV 140 (1102)
+|...++. .+..+.. ... .++.|+|...+ |+.+..+|.+.+++.. +.++.+ |...+++
T Consensus 180 ~wd~~~~~----~~~~~~~h~~~v~~~~~sp~g~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~ 254 (319)
T 3frx_A 180 AWNLNQFQ----IEADFIGHNSNINTLTASPDGTL-IASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAA 254 (319)
T ss_dssp EEETTTTE----EEEEECCCCSCEEEEEECTTSSE-EEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEE
T ss_pred EEECCcch----hheeecCCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEE
Confidence 99998875 2222322 233 35899997766 7777778888776532 111222 3345555
Q ss_pred EeCCeEEeccCCCC----CCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 141 IDGSKILVTPLSLS----LMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 141 IDG~~l~lTp~r~a----~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
..++.+++-.+... .+.|+.....-.....+.+++|++++. .+++--.|+++.+|++.
T Consensus 255 ~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~--~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 255 ATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ--TLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS--EEEEEETTSCEEEEEEE
T ss_pred EcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC--EEEEeecCceEEEEEEe
Confidence 55666655444321 112333333334456788999998754 57776789999999864
No 74
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.75 E-value=0.005 Score=67.35 Aligned_cols=177 Identities=13% Similarity=0.113 Sum_probs=111.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+-+ |-....| ++. ...|..++|++|+..|+..- ....|.+|...
T Consensus 60 ~~~~~~~~~~l~s~s------~d~~i~vwd~~~~~~~~~~--~~h-~~~v~~~~~~~~~~~l~sgs---~D~~v~lWd~~ 127 (304)
T 2ynn_A 60 AGKFIARKNWIIVGS------DDFRIRVFNYNTGEKVVDF--EAH-PDYIRSIAVHPTKPYVLSGS---DDLTVKLWNWE 127 (304)
T ss_dssp EEEEEGGGTEEEEEE------TTSEEEEEETTTCCEEEEE--ECC-SSCEEEEEECSSSSEEEEEE---TTSCEEEEEGG
T ss_pred EEEEeCCCCEEEEEC------CCCEEEEEECCCCcEEEEE--eCC-CCcEEEEEEcCCCCEEEEEC---CCCeEEEEECC
Confidence 578999999999976 35789999854 4443343 222 23699999999999998764 23479999987
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------Ee---------eee---cCCcEEEE-E
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------WT---------TAV---MENSTALV-I 141 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w~---------~~~---~d~~~vaV-I 141 (1102)
+-. -+++.+. +.... .++.|+|..+..|+.+..+|.+.+++.. .. +.. .+...++. -
T Consensus 128 ~~~-~~~~~~~-~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s 205 (304)
T 2ynn_A 128 NNW-ALEQTFE-GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (304)
T ss_dssp GTT-EEEEEEC-CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEE
T ss_pred CCc-chhhhhc-ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEc
Confidence 642 2333332 12223 4689999888778888888888776531 00 000 01122222 2
Q ss_pred eCCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 142 DGSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 142 DG~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
+..+|++-.++.. .+ ...+. -...|..++|+++.. .++.-..|+++.+|+...
T Consensus 206 ~D~~i~iWd~~~~---~~--~~~~~~h~~~v~~~~~~p~~~--~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 206 DDLTIKIWDYQTK---SC--VATLEGHMSNVSFAVFHPTLP--IIISGSEDGTLKIWNSST 259 (304)
T ss_dssp TTSEEEEEETTTT---EE--EEEEECCSSCEEEEEECSSSS--EEEEEETTSCEEEEETTT
T ss_pred CCCeEEEEeCCCC---cc--ceeeCCCCCCEEEEEECCCCC--EEEEEcCCCeEEEEECCC
Confidence 3345666555542 11 12222 245788999988653 566667899999999754
No 75
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.74 E-value=0.00057 Score=78.98 Aligned_cols=187 Identities=13% Similarity=0.183 Sum_probs=114.4
Q ss_pred CceeeccCCC-eEEEEeeccCCCCCCeEEEEecCCccee--eeecC---CccccceeeeeecC-CCCeEEEEEeeCCCCe
Q 001314 3 AVLEWMPSGA-NIAAVYDRKSENKCPSIVFYERNGLERS--SFDIN---EQIDSTVELLKWNC-MSDLLAAVVRFEEYDS 75 (1102)
Q Consensus 3 ~~LsWrPsGn-lIA~~qr~~~~~~~~~VvFFERNGLrhg--eF~L~---~~~~~~v~~L~Wn~-DS~iLAv~~~~~~~~~ 75 (1102)
.+|+|.|.|. ++++.. .+..|.+|.-+.-..+ .+... ......|..++|++ ++.+||... ....
T Consensus 185 ~~l~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~---~dg~ 255 (430)
T 2xyi_A 185 YGLSWNPNLNGYLLSAS------DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA---DDQK 255 (430)
T ss_dssp CCEEECTTSTTEEEEEC------TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE---TTSE
T ss_pred EEEEeCCCCCCeEEEEe------CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe---CCCe
Confidence 4689999988 888765 3568999998763221 11111 01234699999999 678888764 3568
Q ss_pred EEEEEcccce-EEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEE----------------eeeec-CC-
Q 001314 76 VKICFFSNNH-WYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIW----------------TTAVM-EN- 135 (1102)
Q Consensus 76 vqLWt~~NYH-WYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w----------------~~~~~-d~- 135 (1102)
|.+|...+.. .-....+. ..... .++.|+|..+..|+.+..+|.+.++++.- .+..+ +.
T Consensus 256 i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~ 334 (430)
T 2xyi_A 256 LMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 334 (430)
T ss_dssp EEEEETTCSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT
T ss_pred EEEEECCCCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC
Confidence 9999998652 11122222 12233 46999999887678888888888877541 11111 22
Q ss_pred cEEEEEe-CCeEEeccCCCC----------CCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 136 STALVID-GSKILVTPLSLS----------LMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 136 ~~vaVID-G~~l~lTp~r~a----------~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
..+++.. ..+|.+-.++.. ..||.+.+..-.-...|.+++|+++.. ..++..-.+|.|.+|++.
T Consensus 335 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 335 TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP-WIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSST-TEEEEEETTSEEEEEEEC
T ss_pred CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCC-CEEEEEECCCCEEEeEcc
Confidence 2333332 234555555441 123333333334456799999988653 356666788999999974
No 76
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.71 E-value=0.0054 Score=68.74 Aligned_cols=176 Identities=9% Similarity=0.046 Sum_probs=107.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.|.|+.|+.+.. .+..|.+|+- +|-....+..+. .+..++|++|+..|++.. .....|.+|...
T Consensus 36 ~~~~s~dg~~l~~~~~-----~d~~i~v~d~~~~~~~~~~~~~~----~v~~~~~spdg~~l~~~~--~~~~~v~v~d~~ 104 (391)
T 1l0q_A 36 GAVISPDGTKVYVANA-----HSNDVSIIDTATNNVIATVPAGS----SPQGVAVSPDGKQVYVTN--MASSTLSVIDTT 104 (391)
T ss_dssp EEEECTTSSEEEEEEG-----GGTEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEE--TTTTEEEEEETT
T ss_pred eEEECCCCCEEEEECC-----CCCeEEEEECCCCeEEEEEECCC----CccceEECCCCCEEEEEE--CCCCEEEEEECC
Confidence 5799999998755542 2468999995 565555555443 789999999999988764 344689999998
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Eee---------eec-CCcEEEEEe--CC
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTT---------AVM-ENSTALVID--GS 144 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~---------~~~-d~~~vaVID--G~ 144 (1102)
+... ...+. .... ..+.|+|....-++....+|.+.+++.. +.. ..+ |...+.|.. +.
T Consensus 105 ~~~~--~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 105 SNTV--AGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp TTEE--EEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred CCeE--EEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCC
Confidence 8652 22222 2223 4689999877623444445666665521 111 112 223343332 23
Q ss_pred eEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEE---eCCceEEEecCC
Q 001314 145 KILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAIL---SDGCLCVVDLPA 201 (1102)
Q Consensus 145 ~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl---~~~~l~l~~~~~ 201 (1102)
+|.+-.++.. -....+.....+.+++|++++. .+++.. .++.+.+|++..
T Consensus 181 ~v~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~g~--~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 181 SISVIDTVTN-----SVIDTVKVEAAPSGIAVNPEGT--KAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp EEEEEETTTT-----EEEEEEECSSEEEEEEECTTSS--EEEEEEECSSCCEEEEEETTT
T ss_pred EEEEEECCCC-----eEEEEEecCCCccceEECCCCC--EEEEEecCcCCCcEEEEECCC
Confidence 4655555442 1223344566788999988654 344444 478899998754
No 77
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.71 E-value=0.0035 Score=68.38 Aligned_cols=189 Identities=13% Similarity=0.119 Sum_probs=109.8
Q ss_pred ceeecc--CCCeEEEEeeccCCCCCCeEEEEecCCcc-eeeeecCCccccceeeeeecCC--CCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMP--SGANIAAVYDRKSENKCPSIVFYERNGLE-RSSFDINEQIDSTVELLKWNCM--SDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrP--sGnlIA~~qr~~~~~~~~~VvFFERNGLr-hgeF~L~~~~~~~v~~L~Wn~D--S~iLAv~~~~~~~~~vqL 78 (1102)
+++|.| .|++||+.. .+..|.+|+-+.-+ .....+.. ....|..++|++| +.+||..- ....|.+
T Consensus 58 ~v~~s~~~~g~~l~s~s------~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~~l~s~s---~d~~v~~ 127 (297)
T 2pm7_B 58 RVDWAHPKFGTILASCS------YDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPMLLVAS---SDGKVSV 127 (297)
T ss_dssp EEEECCGGGCSEEEEEE------TTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCSEEEEEE---TTSEEEE
T ss_pred EEEecCCCcCCEEEEEc------CCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCcEEEEEE---CCCcEEE
Confidence 478976 399999976 35789999865322 11122222 2336999999998 88888764 2458999
Q ss_pred EEcccceEEEEEEEEeccCCC-ceEEecCCC------------CceEEEEeeCCcEEEEEEE-----E------------
Q 001314 79 CFFSNNHWYLKYEIRYLRRDG-IRFMWHPTK------------PLQLICWTLDGQITTYNFI-----W------------ 128 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~-~~~~W~~e~------------pl~L~i~t~~g~~~~~~~~-----w------------ 128 (1102)
|...+-.-..+..+. +.... .++.|+|.. ...|+.+..+|.+.++++. |
T Consensus 128 wd~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~ 206 (297)
T 2pm7_B 128 VEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (297)
T ss_dssp EEBCSSSCBCCEEEE-CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEecCCCceeeeeee-cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc
Confidence 998764211112221 22223 358999863 2347777778888776653 1
Q ss_pred --eeeec-C---CcEEEE-EeCCeEEeccCCCCCCCCcc-cccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 129 --TTAVM-E---NSTALV-IDGSKILVTPLSLSLMPPPM-YLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 129 --~~~~~-d---~~~vaV-IDG~~l~lTp~r~a~VPPPM-~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
.++.+ + ...++. -+..+|++=.++....|... ....-..+..|.+++|++++. .|+..-.|+++.+|+..
T Consensus 207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~--~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN--VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC--CEEEEETTSCEEEEEEC
T ss_pred eEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC--EEEEEcCCCcEEEEEEC
Confidence 11111 2 123333 22334555544432112111 111123567899999998753 57777789999999875
Q ss_pred CCCcc
Q 001314 201 APDML 205 (1102)
Q Consensus 201 ~~~~~ 205 (1102)
....|
T Consensus 285 ~~g~w 289 (297)
T 2pm7_B 285 LEGKW 289 (297)
T ss_dssp TTSCE
T ss_pred CCCcE
Confidence 44344
No 78
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.69 E-value=0.0056 Score=67.57 Aligned_cols=210 Identities=14% Similarity=0.148 Sum_probs=120.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.|.|++||+.. .+..|.+|+ ++|-....|. + ....|..+.|++|+..|+..- ....|.+|+..
T Consensus 70 ~~~~s~dg~~l~s~s------~D~~v~~wd~~~~~~~~~~~--~-h~~~v~~~~~~~~~~~l~s~s---~D~~i~vwd~~ 137 (319)
T 3frx_A 70 DCTLTADGAYALSAS------WDKTLRLWDVATGETYQRFV--G-HKSDVMSVDIDKKASMIISGS---RDKTIKVWTIK 137 (319)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTTTEEEEEEE--C-CSSCEEEEEECTTSCEEEEEE---TTSCEEEEETT
T ss_pred EEEECCCCCEEEEEe------CCCEEEEEECCCCCeeEEEc--c-CCCcEEEEEEcCCCCEEEEEe---CCCeEEEEECC
Confidence 478999999999976 357899998 4554444443 2 233699999999999998764 23479999987
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCC-----ceEEEEeeCCcEEEEEEE---------------Eeeeec-CCcEEEE
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKP-----LQLICWTLDGQITTYNFI---------------WTTAVM-ENSTALV 140 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~p-----l~L~i~t~~g~~~~~~~~---------------w~~~~~-d~~~vaV 140 (1102)
+-. .+.+ .+..+. .++.|+|... ..|+.+..+|.+.+++.. +.+..+ |...++.
T Consensus 138 ~~~---~~~~-~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 138 GQC---LATL-LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp SCE---EEEE-CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEE
T ss_pred CCe---EEEE-eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEE
Confidence 643 2222 122223 3478887543 346666677777665431 111122 2233333
Q ss_pred Ee-CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeec
Q 001314 141 ID-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACI 219 (1102)
Q Consensus 141 ID-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~ 219 (1102)
-. ..+|++=.++.. . ....+..+.+|.+++|++++. . .+...++.+.+|.+........+.+. +. ..
T Consensus 214 ~~~dg~i~iwd~~~~---~--~~~~~~~~~~v~~~~~sp~~~--~-la~~~~~~i~v~~~~~~~~~~~~~~~-~~---~~ 281 (319)
T 3frx_A 214 AGKDGEIMLWNLAAK---K--AMYTLSAQDEVFSLAFSPNRY--W-LAAATATGIKVFSLDPQYLVDDLRPE-FA---GY 281 (319)
T ss_dssp EETTCEEEEEETTTT---E--EEEEEECCSCEEEEEECSSSS--E-EEEEETTEEEEEEETTEEEEEEECCC-CT---TC
T ss_pred EeCCCeEEEEECCCC---c--EEEEecCCCcEEEEEEcCCCC--E-EEEEcCCCcEEEEeCcCeeeeccCcc-cc---cc
Confidence 22 234666555542 1 223444567899999998753 3 44466778999987542221111110 00 00
Q ss_pred cccccCceEEEEEecCceEEEE
Q 001314 220 SETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 220 ~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
.......+..++|-.++..++.
T Consensus 282 ~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 282 SKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp CGGGCCCEEEEEECTTSSEEEE
T ss_pred ccCcCcceeEEEECCCCCEEEE
Confidence 0112234667888888776654
No 79
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.69 E-value=0.0046 Score=75.00 Aligned_cols=204 Identities=14% Similarity=0.125 Sum_probs=116.2
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
.+++|.|.|++||+.. ...|.+++-. |-....| .+. ...|..++|++||..||..- ....|+||..
T Consensus 22 ~~~~~spdg~~l~~~~-------~~~v~l~~~~~~~~~~~~--~~h-~~~v~~~~~spdg~~lasg~---~d~~v~lWd~ 88 (611)
T 1nr0_A 22 VVLGNTPAGDKIQYCN-------GTSVYTVPVGSLTDTEIY--TEH-SHQTTVAKTSPSGYYCASGD---VHGNVRIWDT 88 (611)
T ss_dssp CCCEECTTSSEEEEEE-------TTEEEEEETTCSSCCEEE--CCC-SSCEEEEEECTTSSEEEEEE---TTSEEEEEES
T ss_pred eEEeeCCCCCEEEeCC-------CCEEEEecCCCcccCeEe--cCC-CCceEEEEECCCCcEEEEEe---CCCCEEEeEC
Confidence 3578999999999975 2388899864 4443333 332 23599999999999999874 2457999998
Q ss_pred ccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCC----cEEE-----------------EEEEEee-------ee
Q 001314 82 SNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDG----QITT-----------------YNFIWTT-------AV 132 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g----~~~~-----------------~~~~w~~-------~~ 132 (1102)
.+...-+++++... ... .++.|+|.... |+.+..+. .+.. ....|.. .+
T Consensus 89 ~~~~~~~~~~~~~~-~~~v~~v~fs~dg~~-l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~ 166 (611)
T 1nr0_A 89 TQTTHILKTTIPVF-SGPVKDISWDSESKR-IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISG 166 (611)
T ss_dssp SSTTCCEEEEEECS-SSCEEEEEECTTSCE-EEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred CCCcceeeEeeccc-CCceEEEEECCCCCE-EEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEE
Confidence 76554455555432 223 35899998765 54433221 1211 1111111 01
Q ss_pred cCCcEEEEEeCCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCC
Q 001314 133 MENSTALVIDGSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGT 211 (1102)
Q Consensus 133 ~d~~~vaVIDG~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~ 211 (1102)
+++++|-+-|+.+ --+...+. -...|.+|+|++++. .++..-.|+++.+|+.........+...
T Consensus 167 s~D~~v~lwd~~~-------------~~~~~~l~~H~~~V~~v~fspdg~--~las~s~D~~i~lwd~~~g~~~~~~~~~ 231 (611)
T 1nr0_A 167 SDDNTVAIFEGPP-------------FKFKSTFGEHTKFVHSVRYNPDGS--LFASTGGDGTIVLYNGVDGTKTGVFEDD 231 (611)
T ss_dssp ETTSCEEEEETTT-------------BEEEEEECCCSSCEEEEEECTTSS--EEEEEETTSCEEEEETTTCCEEEECBCT
T ss_pred eCCCeEEEEECCC-------------CeEeeeeccccCceEEEEECCCCC--EEEEEECCCcEEEEECCCCcEeeeeccc
Confidence 2333333333221 11111121 245799999998753 6777788999999997543222111100
Q ss_pred ceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 212 EFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
... .....+.+..++|..++..++.
T Consensus 232 ~~~-----~~~h~~~V~~v~~spdg~~l~s 256 (611)
T 1nr0_A 232 SLK-----NVAHSGSVFGLTWSPDGTKIAS 256 (611)
T ss_dssp TSS-----SCSSSSCEEEEEECTTSSEEEE
T ss_pred ccc-----ccccCCCEEEEEECCCCCEEEE
Confidence 000 0022346777888877765554
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.69 E-value=0.0031 Score=71.76 Aligned_cols=204 Identities=10% Similarity=0.075 Sum_probs=121.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+-+ |-....|. . ....|..+.| ++++|+... ....|.+|+..
T Consensus 139 ~v~~s~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~--~-~~~~v~~~~~--~~~~l~~~~---~dg~i~i~d~~ 204 (401)
T 4aez_A 139 SVKWSHDGSFLSVGL------GNGLVDIYDVESQTKLRTMA--G-HQARVGCLSW--NRHVLSSGS---RSGAIHHHDVR 204 (401)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEETTTCCEEEEEC--C-CSSCEEEEEE--ETTEEEEEE---TTSEEEEEETT
T ss_pred EEEECCCCCEEEEEC------CCCeEEEEECcCCeEEEEec--C-CCCceEEEEE--CCCEEEEEc---CCCCEEEEecc
Confidence 589999999999976 34689999854 33333332 2 2346899999 567777764 34689999998
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Eeee----------ec-CCc-EEEEEe--
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTTA----------VM-ENS-TALVID-- 142 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~~----------~~-d~~-~vaVID-- 142 (1102)
.-.-. ...+ .+.... .++.|+|...+ |+.++.+|.+.+++.. +... .+ +.. .+++-.
T Consensus 205 ~~~~~-~~~~-~~~~~~v~~~~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs 281 (401)
T 4aez_A 205 IANHQ-IGTL-QGHSSEVCGLAWRSDGLQ-LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT 281 (401)
T ss_dssp SSSCE-EEEE-ECCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT
T ss_pred cCcce-eeEE-cCCCCCeeEEEEcCCCCE-EEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCC
Confidence 43311 1111 122233 35899996655 8888888988877642 1111 11 222 333321
Q ss_pred -CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEE--eCCceEEEecCCCCccccccCCceeeeeec
Q 001314 143 -GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAIL--SDGCLCVVDLPAPDMLEDLEGTEFVVEACI 219 (1102)
Q Consensus 143 -G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl--~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~ 219 (1102)
..+|.+-.++.. - ....+..+..|.+++|++++. .+++.. .++.+.+|++....... ...
T Consensus 282 ~d~~i~i~d~~~~---~--~~~~~~~~~~v~~~~~s~~~~--~l~~~~g~~dg~i~v~~~~~~~~~~---------~~~- 344 (401)
T 4aez_A 282 MDKQIHFWNAATG---A--RVNTVDAGSQVTSLIWSPHSK--EIMSTHGFPDNNLSIWSYSSSGLTK---------QVD- 344 (401)
T ss_dssp TTCEEEEEETTTC---C--EEEEEECSSCEEEEEECSSSS--EEEEEECTTTCEEEEEEEETTEEEE---------EEE-
T ss_pred CCCEEEEEECCCC---C--EEEEEeCCCcEEEEEECCCCC--eEEEEeecCCCcEEEEecCCcccee---------EEE-
Confidence 234555555542 1 233445678899999998754 444433 48999999975421110 000
Q ss_pred cccccCceEEEEEecCceEEEE
Q 001314 220 SETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 220 ~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
.....+.+..+.|..++..++.
T Consensus 345 ~~~h~~~v~~~~~s~dg~~l~s 366 (401)
T 4aez_A 345 IPAHDTRVLYSALSPDGRILST 366 (401)
T ss_dssp EECCSSCCCEEEECTTSSEEEE
T ss_pred ecCCCCCEEEEEECCCCCEEEE
Confidence 1122345777888877766654
No 81
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.69 E-value=0.0022 Score=71.88 Aligned_cols=169 Identities=11% Similarity=0.103 Sum_probs=104.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeec---CCccccceeeeeecCCCCeEEEEEeeCCCCeEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDI---NEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKIC 79 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L---~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLW 79 (1102)
+++|.|.| ++++.. .+..|.+|+- +|-.-..|.. ..+....|..+.|++|+..|++.........|.+|
T Consensus 191 ~~~~~~~~-~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~ 263 (397)
T 1sq9_A 191 SVDISERG-LIATGF------NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 263 (397)
T ss_dssp EEEECTTS-EEEEEC------TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred EEEECCCc-eEEEEe------CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEE
Confidence 58999999 888875 3568999984 4555555554 11114479999999999999987632111589999
Q ss_pred EcccceEEEEEEEEec------------cCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeE
Q 001314 80 FFSNNHWYLKYEIRYL------------RRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKI 146 (1102)
Q Consensus 80 t~~NYHWYLKqei~~~------------~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l 146 (1102)
...+.. ...++..+ .... .++.|+|...+ |+.++.+|.+.+ |++. ....+..+...
T Consensus 264 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~i----wd~~--~~~~~~~~~~~-- 332 (397)
T 1sq9_A 264 ETEFGE--RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET-LCSAGWDGKLRF----WDVK--TKERITTLNMH-- 332 (397)
T ss_dssp ETTTCC--EEEEECBC--------CCBSBSSCEEEEEECSSSSE-EEEEETTSEEEE----EETT--TTEEEEEEECC--
T ss_pred ECCCCc--ccceeccCcccccccccccccCCcEEEEEECCCCCE-EEEEeCCCeEEE----EEcC--CCceeEEEecc--
Confidence 998765 22333221 2233 45899997766 777777777765 4332 11223333210
Q ss_pred EeccCCCCCCCCcccc------cc----cccCCceeEEEEecCCC--------CceEEEEEeCCceEEEecC
Q 001314 147 LVTPLSLSLMPPPMYL------FS----LKFPTAVTEMAFYSKSS--------KNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 147 ~lTp~r~a~VPPPM~~------~~----l~~~~~i~~vaf~~~~~--------~~~~a~vl~~~~l~l~~~~ 200 (1102)
.+++.+ .. -.-..+|.+++|++++. .+.++....++.+.+|++.
T Consensus 333 ----------~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 333 ----------CDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp ----------GGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred ----------cCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 000000 00 00156899999998752 1466776789999999874
No 82
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.0038 Score=67.02 Aligned_cols=203 Identities=7% Similarity=-0.017 Sum_probs=120.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceee--eecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSS--FDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhge--F~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|++||+.. .+..|.+|.-.....++ ..++. ....|..+.| +++.|+... ....|.+|..
T Consensus 64 ~~~~~~~~~~l~~~~------~dg~i~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~~l~~~~---~d~~i~~~d~ 131 (313)
T 3odt_A 64 SVCYDSEKELLLFGG------KDTMINGVPLFATSGEDPLYTLIG-HQGNVCSLSF--QDGVVISGS---WDKTAKVWKE 131 (313)
T ss_dssp EEEEETTTTEEEEEE------TTSCEEEEETTCCTTSCC-CEECC-CSSCEEEEEE--ETTEEEEEE---TTSEEEEEET
T ss_pred EEEECCCCCEEEEec------CCCeEEEEEeeecCCCCcccchhh-cccCEEEEEe--cCCEEEEEe---CCCCEEEEcC
Confidence 589999999999976 34577777755443222 22222 2346899999 577887764 3458999984
Q ss_pred ccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Eee---------eecCCc-EEEEEeCCe
Q 001314 82 SNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTT---------AVMENS-TALVIDGSK 145 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~---------~~~d~~-~vaVIDG~~ 145 (1102)
+.. .+.+.. .... .++.|+|.....|+.++.+|.+.+++.. +.. ..+.++ .++.-...+
T Consensus 132 ~~~----~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~ 206 (313)
T 3odt_A 132 GSL----VYNLQA-HNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGL 206 (313)
T ss_dssp TEE----EEEEEC-CSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSE
T ss_pred CcE----EEeccc-CCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCeEEEccCCCe
Confidence 332 222222 1223 4689988666668888888988877621 110 011222 222233445
Q ss_pred EEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccC
Q 001314 146 ILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFG 225 (1102)
Q Consensus 146 l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 225 (1102)
|.+-.++.. -+..... .-..+|.+++|++++ .+++...++.+.+|++........+ ....+
T Consensus 207 i~i~d~~~~---~~~~~~~-~~~~~i~~~~~~~~~---~l~~~~~dg~v~iwd~~~~~~~~~~------------~~~~~ 267 (313)
T 3odt_A 207 IKLVDMHTG---DVLRTYE-GHESFVYCIKLLPNG---DIVSCGEDRTVRIWSKENGSLKQVI------------TLPAI 267 (313)
T ss_dssp EEEEETTTC---CEEEEEE-CCSSCEEEEEECTTS---CEEEEETTSEEEEECTTTCCEEEEE------------ECSSS
T ss_pred EEEEECCch---hhhhhhh-cCCceEEEEEEecCC---CEEEEecCCEEEEEECCCCceeEEE------------eccCc
Confidence 666655542 2222111 245679999999875 3677788999999997543221111 12234
Q ss_pred ceEEEEEecCceEEEEE
Q 001314 226 SVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 226 ~~~~~~w~~~~~ll~~~ 242 (1102)
.+..+.|..++.+++..
T Consensus 268 ~i~~~~~~~~~~~~~~~ 284 (313)
T 3odt_A 268 SIWSVDCMSNGDIIVGS 284 (313)
T ss_dssp CEEEEEECTTSCEEEEE
T ss_pred eEEEEEEccCCCEEEEe
Confidence 67788898888766543
No 83
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.67 E-value=0.0059 Score=66.44 Aligned_cols=206 Identities=11% Similarity=0.110 Sum_probs=113.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.|.|++||+.. .+..|.+|+-+ |-....| +. ....|..+.|++|+..|+... ....|++|...
T Consensus 70 ~~~~~~~~~~l~s~~------~d~~i~vwd~~~~~~~~~~--~~-~~~~v~~~~~~~~~~~l~s~~---~d~~i~iwd~~ 137 (312)
T 4ery_A 70 DVAWSSDSNLLVSAS------DDKTLKIWDVSSGKCLKTL--KG-HSNYVFCCNFNPQSNLIVSGS---FDESVRIWDVK 137 (312)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTTCCEEEEE--EC-CSSCEEEEEECSSSSEEEEEE---TTSCEEEEETT
T ss_pred EEEEcCCCCEEEEEC------CCCEEEEEECCCCcEEEEE--cC-CCCCEEEEEEcCCCCEEEEEe---CCCcEEEEECC
Confidence 589999999999976 35689999843 3222222 22 223689999999999998764 24579999998
Q ss_pred cceEEEEEEEEeccCCCc-eEEecCCCCceEEEEeeCCcEEEEEEEE-----e-----------eeec-CCcEEEEE-eC
Q 001314 83 NNHWYLKYEIRYLRRDGI-RFMWHPTKPLQLICWTLDGQITTYNFIW-----T-----------TAVM-ENSTALVI-DG 143 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~~-~~~W~~e~pl~L~i~t~~g~~~~~~~~w-----~-----------~~~~-d~~~vaVI-DG 143 (1102)
+..- .+.+. .....+ ++.|+|...+ |+.++.+|.+.+++..- . +..+ +...+++. ..
T Consensus 138 ~~~~--~~~~~-~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 138 TGKC--LKTLP-AHSDPVSAVHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 213 (312)
T ss_dssp TCCE--EEEEC-CCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT
T ss_pred CCEE--EEEec-CCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 7651 12221 112333 5899997665 77778888888766420 0 0011 22223322 22
Q ss_pred CeEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeecccc
Q 001314 144 SKILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISET 222 (1102)
Q Consensus 144 ~~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~ 222 (1102)
..|.+-.++..- ++..+.- .-........|+..+. ..++.-..++.+.+|++........+. .
T Consensus 214 ~~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~------------~ 277 (312)
T 4ery_A 214 NTLKLWDYSKGK---CLKTYTGHKNEKYCIFANFSVTGG-KWIVSGSEDNLVYIWNLQTKEIVQKLQ------------G 277 (312)
T ss_dssp TEEEEEETTTTE---EEEEECSSCCSSSCCCEEEECSSS-CEEEECCTTSCEEEEETTTCCEEEEEC------------C
T ss_pred CeEEEEECCCCc---EEEEEEecCCceEEEEEEEEeCCC-cEEEEECCCCEEEEEECCCchhhhhhh------------c
Confidence 345555554321 1111100 0011122334444332 345555668899999976433221111 1
Q ss_pred ccCceEEEEEecCceEEEE
Q 001314 223 AFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 223 ~~~~~~~~~w~~~~~ll~~ 241 (1102)
..+.+..+.|..++.+++.
T Consensus 278 h~~~v~~~~~~p~~~~l~s 296 (312)
T 4ery_A 278 HTDVVISTACHPTENIIAS 296 (312)
T ss_dssp CSSCEEEEEECSSSSEEEE
T ss_pred cCCcEEEEeecCcCCceEE
Confidence 2235667777776666654
No 84
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.66 E-value=0.0011 Score=75.81 Aligned_cols=167 Identities=14% Similarity=0.191 Sum_probs=102.0
Q ss_pred ceeeccCC-CeEEEEeeccCCCCCCeEEEEe-cCCcc----eeeeecCCccc-----------cceeeeeecCCCCeEEE
Q 001314 4 VLEWMPSG-ANIAAVYDRKSENKCPSIVFYE-RNGLE----RSSFDINEQID-----------STVELLKWNCMSDLLAA 66 (1102)
Q Consensus 4 ~LsWrPsG-nlIA~~qr~~~~~~~~~VvFFE-RNGLr----hgeF~L~~~~~-----------~~v~~L~Wn~DS~iLAv 66 (1102)
+++|.|.| ++||+.. .+..|.+|+ |+|-. ...|..+ .+ ..|..++|++|+..|+.
T Consensus 231 ~~~~~p~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 231 AAEFHPNSCNTFVYSS------SKGTIRLCDMRASALCDRHSKLFEEP--EDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp EEEECSSCTTEEEEEE------TTSCEEEEETTTCSSSCTTCEEECCC-------CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred EEEECCCCCcEEEEEe------CCCeEEEEECcCCccccceeeEeccC--CCccccccccccCceEEEEEECCCCCEEEE
Confidence 58999998 8999876 356899998 44443 2333332 11 26999999999999997
Q ss_pred EEeeCCCCeEEEEEccc-ceEEEEEEEEecc--CC-------------CceEEecCCCCceEEEEeeCCcEEEEEEEEee
Q 001314 67 VVRFEEYDSVKICFFSN-NHWYLKYEIRYLR--RD-------------GIRFMWHPTKPLQLICWTLDGQITTYNFIWTT 130 (1102)
Q Consensus 67 ~~~~~~~~~vqLWt~~N-YHWYLKqei~~~~--~~-------------~~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~ 130 (1102)
.. . ..|.+|...+ ..- .+.+.... .. ...+.|+|...+ |+.++.+|.+.+ |++
T Consensus 303 ~~---~-~~v~iwd~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~-l~s~s~dg~v~i----wd~ 371 (447)
T 3dw8_B 303 RD---Y-LSVKVWDLNMENRP--VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV-VMTGSYNNFFRM----FDR 371 (447)
T ss_dssp EE---S-SEEEEEETTCCSSC--SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE-EEEECSTTEEEE----EET
T ss_pred ee---C-CeEEEEeCCCCccc--cceeeccccccccccccccccccccceEEEECCCCCE-EEEeccCCEEEE----EEc
Confidence 64 3 7899999976 331 11121110 00 012899998876 777777887776 443
Q ss_pred eecCCcEEEEEeCCe-------------EEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEE
Q 001314 131 AVMENSTALVIDGSK-------------ILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVV 197 (1102)
Q Consensus 131 ~~~d~~~vaVIDG~~-------------l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~ 197 (1102)
. .+....+.+.. +.... ...++......+.++..|.+++|+|+. +.+| +.+.+.+++|
T Consensus 372 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~p~~--~~la-~~~~~~~~~~ 442 (447)
T 3dw8_B 372 N---TKRDITLEASRENNKPRTVLKPRKVCASG---KRKKDEISVDSLDFNKKILHTAWHPKE--NIIA-VATTNNLYIF 442 (447)
T ss_dssp T---TCCEEEEECCSTTCCTTCBCCCCCEECSS---CCCTTCEEGGGCCTTSCCCEEEECSSS--SEEE-EECSSCEEEE
T ss_pred C---CCcceeeeecccccccccccCCccccccC---CcccccccccccccCCceeEEEECCCC--CEEE-EEecceeeee
Confidence 2 12111222221 11111 012344555667888899999998865 3454 4566678887
Q ss_pred e
Q 001314 198 D 198 (1102)
Q Consensus 198 ~ 198 (1102)
.
T Consensus 443 ~ 443 (447)
T 3dw8_B 443 Q 443 (447)
T ss_dssp E
T ss_pred c
Confidence 6
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.66 E-value=0.0068 Score=69.05 Aligned_cols=142 Identities=8% Similarity=0.059 Sum_probs=86.0
Q ss_pred cceeeeeecCCCCeEEEEEeeCCCCeEEEEEcccceEEEEEEE-----Eecc-CCC-ceEEecCCCCceEEEEeeCCcEE
Q 001314 50 STVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKYEI-----RYLR-RDG-IRFMWHPTKPLQLICWTLDGQIT 122 (1102)
Q Consensus 50 ~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~NYHWYLKqei-----~~~~-~~~-~~~~W~~e~pl~L~i~t~~g~~~ 122 (1102)
..|..++|++|++.||.. ....|.+|+..+-.-.+ +.+ .+.. ... .++.|+|..+..|+.++.+|.+.
T Consensus 178 ~~v~~~~~~~~~~~l~s~----~d~~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA----DDLRINLWHLEITDRSF-NIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCCEEEECTTSSEEEEE----CSSEEEEEETTEEEEEE-EEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cceEEEEEcCCCCEEEEe----CCCeEEEEECCCCCcee-eeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 358999999999999974 25689999998432111 111 0111 223 35899999866688888888888
Q ss_pred EEEEE-------------------------------Eeeeec-CCcEEEEEeCCeEEeccCCCCCCCCcccccccccCCc
Q 001314 123 TYNFI-------------------------------WTTAVM-ENSTALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTA 170 (1102)
Q Consensus 123 ~~~~~-------------------------------w~~~~~-d~~~vaVIDG~~l~lTp~r~a~VPPPM~~~~l~~~~~ 170 (1102)
+++.. ..+..+ +...+++-+..+|.+-.++.. ..|+... .....
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~--~~~~~~~--~~~~~ 328 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNME--NRPVETY--QVHEY 328 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCC--SSCSCCE--ESCGG
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCC--cccccee--ecccc
Confidence 77632 111112 233444444477777777641 1122211 11221
Q ss_pred ----------------eeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 171 ----------------VTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 171 ----------------i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+..++|++++. .|+....|+.+.+|++...
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~--~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDS--VVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSS--EEEEECSTTEEEEEETTTC
T ss_pred ccccccccccccccccceEEEECCCCC--EEEEeccCCEEEEEEcCCC
Confidence 22389988653 5666678899999998653
No 86
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.65 E-value=0.0027 Score=71.08 Aligned_cols=183 Identities=13% Similarity=0.144 Sum_probs=110.8
Q ss_pred ceeeccC----C---CeEEEEeeccCCCCCCeEEEEecCCcc------eeeeecCCcc--ccceeeeeec----CCCCe-
Q 001314 4 VLEWMPS----G---ANIAAVYDRKSENKCPSIVFYERNGLE------RSSFDINEQI--DSTVELLKWN----CMSDL- 63 (1102)
Q Consensus 4 ~LsWrPs----G---nlIA~~qr~~~~~~~~~VvFFERNGLr------hgeF~L~~~~--~~~v~~L~Wn----~DS~i- 63 (1102)
+++|.|. | ++||+.. .+..|.+|+-++.+ ...+...... ...|..+.|+ +|+..
T Consensus 67 ~~~~~~~~~~~g~~~~~l~s~~------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 140 (397)
T 1sq9_A 67 HVDVLQAIERDAFELCLVATTS------FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHR 140 (397)
T ss_dssp EEEEEEEEETTTEEEEEEEEEE------TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEE
T ss_pred EEEEecccccCCccccEEEEEc------CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceE
Confidence 5889999 9 9999876 34578888765544 3333222101 3579999999 99999
Q ss_pred EEEEEeeCCCCeEEEEEccc---------ceEEEEEEEEe-----cc-CCC-ceEEecCCCCceEEEEeeCCcEEEEEEE
Q 001314 64 LAAVVRFEEYDSVKICFFSN---------NHWYLKYEIRY-----LR-RDG-IRFMWHPTKPLQLICWTLDGQITTYNFI 127 (1102)
Q Consensus 64 LAv~~~~~~~~~vqLWt~~N---------YHWYLKqei~~-----~~-~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~ 127 (1102)
|++.. ....|.+|...+ .+|.....+.. .. ... .++.|+|.. .|++++.+|.+.+++..
T Consensus 141 l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~ 215 (397)
T 1sq9_A 141 LVATD---VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELS 215 (397)
T ss_dssp EEEEE---TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETT
T ss_pred EEEEe---CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECC
Confidence 88764 245799999876 22322223321 11 222 468999988 58888888888777632
Q ss_pred -------Eee-------e-------ec-CCcEEEEEeC----CeEEeccCCCCCCCCccccccc------------ccCC
Q 001314 128 -------WTT-------A-------VM-ENSTALVIDG----SKILVTPLSLSLMPPPMYLFSL------------KFPT 169 (1102)
Q Consensus 128 -------w~~-------~-------~~-d~~~vaVIDG----~~l~lTp~r~a~VPPPM~~~~l------------~~~~ 169 (1102)
+.. . .+ +...+++... ..|.+-.++.. -++....- ....
T Consensus 216 ~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 292 (397)
T 1sq9_A 216 TLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG---ERIGSLSVPTHSSQASLGEFAHSS 292 (397)
T ss_dssp TTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC---CEEEEECBC--------CCBSBSS
T ss_pred CCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC---cccceeccCcccccccccccccCC
Confidence 221 1 11 3334444332 35666666542 12221111 1467
Q ss_pred ceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 170 AVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 170 ~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
.|.+++|++++ +.+++...++.+.+|++...
T Consensus 293 ~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 293 WVMSLSFNDSG--ETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp CEEEEEECSSS--SEEEEEETTSEEEEEETTTT
T ss_pred cEEEEEECCCC--CEEEEEeCCCeEEEEEcCCC
Confidence 89999998865 36777678899999998653
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.65 E-value=0.0037 Score=74.30 Aligned_cols=180 Identities=9% Similarity=0.110 Sum_probs=109.5
Q ss_pred ceeecc--CCCeEEEEeeccCCCCCCeEEEEec-CC------cceeeeecCCccccceeeeeecCCCCeEEEEEeeCC-C
Q 001314 4 VLEWMP--SGANIAAVYDRKSENKCPSIVFYER-NG------LERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEE-Y 73 (1102)
Q Consensus 4 ~LsWrP--sGnlIA~~qr~~~~~~~~~VvFFER-NG------LrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~-~ 73 (1102)
+++|.| .|++||+.. .+..|.+|+- +| -..-...++. ....|..++|++|+..|++.....+ .
T Consensus 69 ~~~~sp~~~~~~l~s~~------~dg~v~vw~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~~~ 141 (615)
T 1pgu_A 69 TVKFSPIKGSQYLCSGD------ESGKVIVWGWTFDKESNSVEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGEGRDNF 141 (615)
T ss_dssp EEEECSSTTCCEEEEEE------TTSEEEEEEEEEEGGGTEEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEECCSSCS
T ss_pred EEEECcCCCCCEEEEec------CCCEEEEEeCCCCcccccccccccchhhc-ccccEEEEEEeCCCCEEEEeccCCCCc
Confidence 589999 999999976 3568999987 44 1111122222 2346999999999999998863211 1
Q ss_pred CeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE------------------Eeeeec-
Q 001314 74 DSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI------------------WTTAVM- 133 (1102)
Q Consensus 74 ~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~------------------w~~~~~- 133 (1102)
..|.+|..++.- ..+. +.... .++.|+|..+..|+.+..+|.+.+++.. +.+..+
T Consensus 142 ~~v~~~d~~~~~----~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 216 (615)
T 1pgu_A 142 GVFISWDSGNSL----GEVS-GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP 216 (615)
T ss_dssp EEEEETTTCCEE----EECC-SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS
T ss_pred cEEEEEECCCcc----eeee-cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC
Confidence 479999866522 2221 11223 3589999998668887878887776521 111112
Q ss_pred C-CcEEEEEe-CCeEEeccCCCCCCCCccccccc---ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 134 E-NSTALVID-GSKILVTPLSLSLMPPPMYLFSL---KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 134 d-~~~vaVID-G~~l~lTp~r~a~VPPPM~~~~l---~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
+ ...+++.. ...|.+-.++.. .++....- ....+|.+++|+ ++ +.+++...++.+.+|++..
T Consensus 217 ~~~~~l~~~~~dg~i~vwd~~~~---~~~~~~~~~~~~~~~~v~~~~~~-~~--~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 217 DSGEFVITVGSDRKISCFDGKSG---EFLKYIEDDQEPVQGGIFALSWL-DS--QKFATVGADATIRVWDVTT 283 (615)
T ss_dssp TTCCEEEEEETTCCEEEEETTTC---CEEEECCBTTBCCCSCEEEEEES-SS--SEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEeCCCeEEEEECCCC---CEeEEecccccccCCceEEEEEc-CC--CEEEEEcCCCcEEEEECCC
Confidence 2 22333322 223555444432 22222211 456789999998 33 4666667789999999864
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.65 E-value=0.0032 Score=68.64 Aligned_cols=183 Identities=14% Similarity=0.073 Sum_probs=111.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
...|.|.|++|++.. .+..|.+|+-++...-.+.+... ...|..+.|+.++.-..+..- .....|.+|...+
T Consensus 133 ~~~~~~~~~~l~s~s------~d~~~~~~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~s~-~~d~~i~i~d~~~ 204 (340)
T 4aow_A 133 SVAFSSDNRQIVSGS------RDKTIKLWNTLGVCKYTVQDESH-SEWVSCVRFSPNSSNPIIVSC-GWDKLVKVWNLAN 204 (340)
T ss_dssp EEEECTTSSCEEEEE------TTSCEEEECTTSCEEEEECSSSC-SSCEEEEEECSCSSSCEEEEE-ETTSCEEEEETTT
T ss_pred EEEEeecCccceeec------CCCeEEEEEeCCCceEEEEeccc-cCcccceEEccCCCCcEEEEE-cCCCEEEEEECCC
Confidence 356888999988876 34578888877665554444432 335788888888754333321 2345799999988
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE--------------Eeeeec-CCcEEEEEeCCeEE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI--------------WTTAVM-ENSTALVIDGSKIL 147 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~--------------w~~~~~-d~~~vaVIDG~~l~ 147 (1102)
... .+.+. +.... .++.|+|...+ |+.++.+|.+.+++.. ..+..+ +...++.-++.+|+
T Consensus 205 ~~~--~~~~~-~h~~~v~~~~~s~~~~~-l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~ 280 (340)
T 4aow_A 205 CKL--KTNHI-GHTGYLNTVTVSPDGSL-CASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIK 280 (340)
T ss_dssp TEE--EEEEC-CCSSCEEEEEECTTSSE-EEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEE
T ss_pred Cce--eeEec-CCCCcEEEEEECCCCCE-EEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEE
Confidence 762 22221 12233 35899998776 7777888888776532 111122 33355555666677
Q ss_pred eccCCCCC----CCCccc-ccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 148 VTPLSLSL----MPPPMY-LFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 148 lTp~r~a~----VPPPM~-~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
+-.++... .+++.. ...-.-+..|.+++|++++. .|+..-.||++.+|++.
T Consensus 281 iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~--~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 281 IWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ--TLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS--EEEEEETTSCEEEEEEE
T ss_pred EEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC--EEEEEeCCCEEEEEeCC
Confidence 76655432 122222 22223456799999998653 66776788999999874
No 89
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.63 E-value=0.0014 Score=70.73 Aligned_cols=186 Identities=11% Similarity=0.087 Sum_probs=109.0
Q ss_pred ceeeccC--CCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCC----------ccccceeeeeecCC---CCeEEEE
Q 001314 4 VLEWMPS--GANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINE----------QIDSTVELLKWNCM---SDLLAAV 67 (1102)
Q Consensus 4 ~LsWrPs--GnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~----------~~~~~v~~L~Wn~D---S~iLAv~ 67 (1102)
.++|.|. |++|++.. .+..|.+|+ ++|-....|.++. .....+..+.|+++ ++.|++.
T Consensus 115 ~~~~~~~~~~~~l~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~ 188 (351)
T 3f3f_A 115 SVKFAPAHLGLKLACLG------NDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVS 188 (351)
T ss_dssp EEEECCGGGCSEEEEEE------TTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEE
T ss_pred EEEEcCCCCCcEEEEec------CCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEe
Confidence 5889998 99999876 356899999 7776666665431 12235889999998 8999887
Q ss_pred EeeCCCCeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCC---ceEEEEeeCCcEEEEEEEEeeee-----------
Q 001314 68 VRFEEYDSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKP---LQLICWTLDGQITTYNFIWTTAV----------- 132 (1102)
Q Consensus 68 ~~~~~~~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~p---l~L~i~t~~g~~~~~~~~w~~~~----------- 132 (1102)
. ....+.+|...+..+.....+.- .... .++.|+|..+ ..|+.+..+|.+.+++..-....
T Consensus 189 ~---~~~~~~~~~~~~~~~~~~~~~~~-h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 264 (351)
T 3f3f_A 189 A---LEQAIIYQRGKDGKLHVAAKLPG-HKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSN 264 (351)
T ss_dssp E---TTEEEEEEECTTSCEEEEEECCC-CCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------------
T ss_pred c---CCCcEEEEccCCCceeeeeecCC-CCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccccee
Confidence 5 23467777777776533333321 1223 4689999874 44777788899988776632110
Q ss_pred ----c-CC--cEEEEEeCCeEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCC
Q 001314 133 ----M-EN--STALVIDGSKILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPD 203 (1102)
Q Consensus 133 ----~-d~--~~vaVIDG~~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~ 203 (1102)
+ +. ......++.....-.+... .++-....+ .-..+|.+++|++++. .|+..-.|+.+.+|++....
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~~~~--~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 265 MFDNSADVDMDAQGRSDSNTEEKAELQSN--LQVELLSEHDDHNGEVWSVSWNLTGT--ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp --------------------------CCS--EEEEEEEEECTTSSCEEEEEECSSSC--CEEEEETTSCEEEEEECTTS
T ss_pred ccCCCcccccccccccccccceeeeeccc--ccccEEEEEecccccEEEEEEcCCCC--EEEEecCCCcEEEEecCcCc
Confidence 0 00 0001122222211111111 111111111 1345799999998653 56776789999999986543
No 90
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.60 E-value=0.0065 Score=74.67 Aligned_cols=205 Identities=13% Similarity=0.069 Sum_probs=120.7
Q ss_pred ceeeccC-CCeEEEEeeccCCCCCCeEEEEecCCc--cee--eeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPS-GANIAAVYDRKSENKCPSIVFYERNGL--ERS--SFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPs-GnlIA~~qr~~~~~~~~~VvFFERNGL--rhg--eF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqL 78 (1102)
+++|.|. +++||+.. .+..|.+|+-+.- ..+ .-.+.++ ...|..++|++|+..|+..- ....|.+
T Consensus 387 ~v~~~~~~~~~l~s~s------~D~~i~~W~~~~~~~~~~~~~~~~~~h-~~~v~~v~~s~~g~~l~sgs---~Dg~v~v 456 (694)
T 3dm0_A 387 AIATPIDNADIIVSAS------RDKSIILWKLTKDDKAYGVAQRRLTGH-SHFVEDVVLSSDGQFALSGS---WDGELRL 456 (694)
T ss_dssp EEECCTTCCSEEEEEE------TTSEEEEEECCCSTTCSCEEEEEEECC-SSCEEEEEECTTSSEEEEEE---TTSEEEE
T ss_pred EEEecCCCCCEEEEEe------CCCcEEEEEccCCCcccccccceecCC-CCcEEEEEECCCCCEEEEEe---CCCcEEE
Confidence 5789996 57888876 3578999975431 111 1122322 23599999999999998764 2458999
Q ss_pred EEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE----Ee--------------eeecCCc---
Q 001314 79 CFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI----WT--------------TAVMENS--- 136 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~----w~--------------~~~~d~~--- 136 (1102)
|...+.. ..+.+. +.... .++.|+|.... |+.++.+|.+.+.+.. +. +..+.++
T Consensus 457 wd~~~~~--~~~~~~-~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 457 WDLAAGV--STRRFV-GHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EETTTTE--EEEEEE-CCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EECCCCc--ceeEEe-CCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 9988764 112221 22233 46899998766 7777777887765420 11 1111111
Q ss_pred -EEEEEeCCeEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCcee
Q 001314 137 -TALVIDGSKILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFV 214 (1102)
Q Consensus 137 -~vaVIDG~~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~ 214 (1102)
+++.-...+|++-.++..... ..+ .-...|.+|+|++++. .++....|+++.+|++........+
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~-----~~~~~h~~~v~~v~~spdg~--~l~sg~~Dg~i~iwd~~~~~~~~~~------ 599 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLR-----STLAGHTGYVSTVAVSPDGS--LCASGGKDGVVLLWDLAEGKKLYSL------ 599 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEE-----EEECCCSSCEEEEEECTTSS--EEEEEETTSBCEEEETTTTEEEECC------
T ss_pred eEEEEeCCCeEEEEECCCCcEE-----EEEcCCCCCEEEEEEeCCCC--EEEEEeCCCeEEEEECCCCceEEEe------
Confidence 222222344666665543111 111 1245799999998653 5666678899999998543221111
Q ss_pred eeeeccccccCceEEEEEecCceEEEEE
Q 001314 215 VEACISETAFGSVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 215 ~~~~~~~~~~~~~~~~~w~~~~~ll~~~ 242 (1102)
.....+..++|..++.+++..
T Consensus 600 -------~~~~~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 600 -------EANSVIHALCFSPNRYWLCAA 620 (694)
T ss_dssp -------BCSSCEEEEEECSSSSEEEEE
T ss_pred -------cCCCcEEEEEEcCCCcEEEEE
Confidence 112346677888777777654
No 91
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.0018 Score=80.93 Aligned_cols=189 Identities=13% Similarity=0.117 Sum_probs=116.4
Q ss_pred ceeeccC--CCeEEEEeeccCCCCCCeEEEEecCCcce-eeeecCCccccceeeeeecCC--CCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPS--GANIAAVYDRKSENKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCM--SDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPs--GnlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~D--S~iLAv~~~~~~~~~vqL 78 (1102)
+++|.|. |++||+.. .+..|.+|+-++-+. -...+.. ....|..+.|+++ +.+|++.. ....|.+
T Consensus 58 ~l~~s~~~~~~~l~s~s------~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~~l~sgs---~dg~I~v 127 (753)
T 3jro_A 58 RVDWAHPKFGTILASCS------YDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVAS---SDGKVSV 127 (753)
T ss_dssp EEEECCTTSCSEEEEEE------TTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEE---TTSEEEE
T ss_pred EEEecCCCCCCEEEEEe------CCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCCEEEEEe---CCCcEEE
Confidence 5899987 99999987 356899998665431 1122222 2346999999999 99999875 2458999
Q ss_pred EEcccceEEEEEEEEeccCCC-ceEEecCC------------CCceEEEEeeCCcEEEEEEEEe----------------
Q 001314 79 CFFSNNHWYLKYEIRYLRRDG-IRFMWHPT------------KPLQLICWTLDGQITTYNFIWT---------------- 129 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~-~~~~W~~e------------~pl~L~i~t~~g~~~~~~~~w~---------------- 129 (1102)
|...+-.-.....+. +.... .++.|+|. ++..|++++.+|.+.+++..-.
T Consensus 128 wdl~~~~~~~~~~~~-~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 128 VEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp EECCSSSCCCCEEEE-CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEeecCCCcceeEee-cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 998776322222222 12233 46899995 3455888888899888876411
Q ss_pred ---eeec-C---CcEEEEEe-CCeEEeccCCCCCCCCccc-ccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 130 ---TAVM-E---NSTALVID-GSKILVTPLSLSLMPPPMY-LFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 130 ---~~~~-d---~~~vaVID-G~~l~lTp~r~a~VPPPM~-~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
+..+ + ...+++.. ..+|.+-.++..--|.... .........|.+++|++++. .+++...+|.+.+|++.
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~--~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN--VLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC--CEEEECSSSCEECCBCC
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC--EEEEEcCCCEEEEEecC
Confidence 1112 2 23344332 2246665555432111111 11123566788999988653 56666788999999986
Q ss_pred CCCcc
Q 001314 201 APDML 205 (1102)
Q Consensus 201 ~~~~~ 205 (1102)
....+
T Consensus 285 ~~~~~ 289 (753)
T 3jro_A 285 LEGKW 289 (753)
T ss_dssp SSSCC
T ss_pred CCCCc
Confidence 54433
No 92
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.60 E-value=0.0012 Score=79.65 Aligned_cols=106 Identities=15% Similarity=0.257 Sum_probs=72.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCcc--ccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQI--DSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~--~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|.+||+.. .+..|.+|++.| ....|+ .... ...|..++||+||..||+.. ....|+||+.
T Consensus 90 ~vawSPdG~~LAs~s------~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs---~DGtVkIWd~ 158 (588)
T 2j04_A 90 VCKPSPIDDWMAVLS------NNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN---EDGELQFFSI 158 (588)
T ss_dssp EEEECSSSSCEEEEE------TTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE---TTSEEEEEEC
T ss_pred EEEECCCCCEEEEEe------CCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEc---CCCEEEEEEC
Confidence 579999999999987 356899999988 333454 3211 23599999999999999986 2457999998
Q ss_pred ccce-----EEEEEEEEecc---CCC-ceEEecCCCCceEEEEeeCCcEEE
Q 001314 82 SNNH-----WYLKYEIRYLR---RDG-IRFMWHPTKPLQLICWTLDGQITT 123 (1102)
Q Consensus 82 ~NYH-----WYLKqei~~~~---~~~-~~~~W~~e~pl~L~i~t~~g~~~~ 123 (1102)
..-. ..+.+.+.... .+. .++.|+|.. |+.+..++.+..
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrl 206 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFS 206 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEE
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEE
Confidence 7642 12334554222 123 468999987 555455554443
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.54 E-value=0.0028 Score=69.65 Aligned_cols=179 Identities=14% Similarity=0.116 Sum_probs=108.6
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
.++|.| .|++||+.. .+..|.+|+- +|-....|..-......|..+.|++|+..|+... ....|.+|..
T Consensus 120 ~~~~~~~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~dg~i~i~d~ 190 (366)
T 3k26_A 120 ELKFHPRDPNLLLSVS------KDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG---MDHSLKLWRI 190 (366)
T ss_dssp EEEECSSCTTEEEEEE------TTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE---TTSCEEEEES
T ss_pred EEEECCCCCCEEEEEe------CCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEec---CCCCEEEEEC
Confidence 589999 999999976 3568899984 4544444422112344799999999999998875 2457999998
Q ss_pred ccceEEEEEEEE--------------------------e-ccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEE-----
Q 001314 82 SNNHWYLKYEIR--------------------------Y-LRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIW----- 128 (1102)
Q Consensus 82 ~NYHWYLKqei~--------------------------~-~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w----- 128 (1102)
.+..- .+.+. . ..... .++.|+ +-.|+.++.+|.+.+++..-
T Consensus 191 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~i~~wd~~~~~~~~ 265 (366)
T 3k26_A 191 NSKRM--MNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL---GDLILSKSCENAIVCWKPGKMEDDI 265 (366)
T ss_dssp CSHHH--HHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE---TTEEEEECSSSEEEEEEESSTTCCG
T ss_pred CCCcc--ccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc---CCEEEEEecCCEEEEEeCCCccccc
Confidence 76531 00000 0 01222 358888 23477777788888766420
Q ss_pred --------------e----------eee-cC--CcEEEEEe-CCeEEeccCCCCCCCC-ccccccccc---CCceeEEEE
Q 001314 129 --------------T----------TAV-ME--NSTALVID-GSKILVTPLSLSLMPP-PMYLFSLKF---PTAVTEMAF 176 (1102)
Q Consensus 129 --------------~----------~~~-~d--~~~vaVID-G~~l~lTp~r~a~VPP-PM~~~~l~~---~~~i~~vaf 176 (1102)
. +.. .+ ...+++.. ...|.+-.++..-... ++. .+.. ..+|.+++|
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~~~~~~~~~~v~~~~~ 343 (366)
T 3k26_A 266 DKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCT--TLTHHKCGAAIRQTSF 343 (366)
T ss_dssp GGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEE--EECCTTCCSCEEEEEE
T ss_pred cccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccce--EEcccccCCceEEEEe
Confidence 0 001 12 34444433 2346666665432111 111 2222 578999999
Q ss_pred ecCCCCceEEEEEeCCceEEEecC
Q 001314 177 YSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 177 ~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
++++ +.+++...++.+.+|++.
T Consensus 344 s~~~--~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 344 SRDS--SILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CTTS--SEEEEEETTSEEEEEEC-
T ss_pred CCCC--CeEEEEeCCCEEEEEEec
Confidence 9864 367777888999999863
No 94
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.54 E-value=0.0041 Score=71.45 Aligned_cols=174 Identities=18% Similarity=0.205 Sum_probs=107.4
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++|++.. .+..|.+|+ ++|.....|.-. ...|..+.|++|+.+||..- ....|.+|...
T Consensus 197 ~v~~~p~~~~l~s~s------~D~~i~~wd~~~~~~~~~~~~h---~~~v~~~~~~~~g~~l~s~s---~D~~v~vwd~~ 264 (410)
T 1vyh_C 197 SVSIMPNGDHIVSAS------RDKTIKMWEVQTGYCVKTFTGH---REWVRMVRPNQDGTLIASCS---NDQTVRVWVVA 264 (410)
T ss_dssp EEEECSSSSEEEEEE------TTSEEEEEETTTCCEEEEEECC---SSCEEEEEECTTSSEEEEEE---TTSCEEEEETT
T ss_pred EEEEeCCCCEEEEEe------CCCeEEEEECCCCcEEEEEeCC---CccEEEEEECCCCCEEEEEc---CCCeEEEEECC
Confidence 578999999999876 356899998 455544444322 23588999999999999864 23579999987
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCC-------------------ceEEEEeeCCcEEEEEEE---------------
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKP-------------------LQLICWTLDGQITTYNFI--------------- 127 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~p-------------------l~L~i~t~~g~~~~~~~~--------------- 127 (1102)
+.. .++++.- .... .++.|+|... ..|+.++.+|.+.+++..
T Consensus 265 ~~~--~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v 341 (410)
T 1vyh_C 265 TKE--CKAELRE-HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 341 (410)
T ss_dssp TCC--EEEEECC-CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred CCc--eeeEecC-CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcE
Confidence 765 2344422 1222 3589998642 236777777777765532
Q ss_pred Eeeeec-CCcEE-EEEeCCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEec
Q 001314 128 WTTAVM-ENSTA-LVIDGSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDL 199 (1102)
Q Consensus 128 w~~~~~-d~~~v-aVIDG~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~ 199 (1102)
..+..+ +...+ +.-+..+|++-.++.. -++ ..+. -...|.+++|+++.. .++....|+++.+|+.
T Consensus 342 ~~v~~~~~g~~l~s~s~D~~i~vwd~~~~---~~~--~~~~~h~~~v~~l~~~~~~~--~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 342 RGVLFHSGGKFILSCADDKTLRVWDYKNK---RCM--KTLNAHEHFVTSLDFHKTAP--YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEEECSSSSCEEEEETTTEEEEECCTTS---CCC--EEEECCSSCEEEEEECSSSS--CEEEEETTSEEEEEC-
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCC---ceE--EEEcCCCCcEEEEEEcCCCC--EEEEEeCCCcEEEEeC
Confidence 111112 11222 2233345666555432 111 2222 345799999988653 5666678899999864
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.53 E-value=0.0068 Score=66.34 Aligned_cols=182 Identities=9% Similarity=0.118 Sum_probs=107.9
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc--eeeeecCC-ccccceeeee----ecCCCCeEEEEEeeCCCCeEE
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE--RSSFDINE-QIDSTVELLK----WNCMSDLLAAVVRFEEYDSVK 77 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr--hgeF~L~~-~~~~~v~~L~----Wn~DS~iLAv~~~~~~~~~vq 77 (1102)
++|.|.|++||+.. .+..|.+|+-+.-. ...|.... .....|..+. |++|+..|++.. ....|.
T Consensus 123 ~~~s~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~---~d~~i~ 193 (357)
T 3i2n_A 123 LGIGEGAPEIVTGS------RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGY---DNGDIK 193 (357)
T ss_dssp GGCC-CCCEEEEEE------TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEE---TTSEEE
T ss_pred cccCCCccEEEEEe------CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEc---cCCeEE
Confidence 36789999999876 35688899855433 33333321 1123577777 899999999875 245899
Q ss_pred EEEcccceEEEEEEEEeccCCC-ceEEecCC--CCceEEEEeeCCcEEEEEEEE-------e-------------eeecC
Q 001314 78 ICFFSNNHWYLKYEIRYLRRDG-IRFMWHPT--KPLQLICWTLDGQITTYNFIW-------T-------------TAVME 134 (1102)
Q Consensus 78 LWt~~NYHWYLKqei~~~~~~~-~~~~W~~e--~pl~L~i~t~~g~~~~~~~~w-------~-------------~~~~d 134 (1102)
+|...+..- ... ...... .++.|+|. ....|++++.+|.+.+++..- . +..+.
T Consensus 194 i~d~~~~~~--~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 269 (357)
T 3i2n_A 194 LFDLRNMAL--RWE--TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLP 269 (357)
T ss_dssp EEETTTTEE--EEE--EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEET
T ss_pred EEECccCce--eee--cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECC
Confidence 999988761 222 222333 46899994 334488888889988887651 1 01112
Q ss_pred Cc--EEEEEe-CCeEEeccCCCCCCCCc--------------cccccc-ccCCceeEEEEecCCCCceEE-EEEeCCceE
Q 001314 135 NS--TALVID-GSKILVTPLSLSLMPPP--------------MYLFSL-KFPTAVTEMAFYSKSSKNCLA-AILSDGCLC 195 (1102)
Q Consensus 135 ~~--~vaVID-G~~l~lTp~r~a~VPPP--------------M~~~~l-~~~~~i~~vaf~~~~~~~~~a-~vl~~~~l~ 195 (1102)
++ .++... ...|.+-.++....+.. -....+ .-..+|.+++|++++. .++ ....++.+.
T Consensus 270 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~--~l~~s~~~d~~i~ 347 (357)
T 3i2n_A 270 QNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKR--GLCVCSSFDQTVR 347 (357)
T ss_dssp TEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSST--TEEEEEETTSEEE
T ss_pred CCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCC--eEEEEecCCCcEE
Confidence 22 333322 23566655554322210 011112 2356799999998754 354 356689999
Q ss_pred EEecCC
Q 001314 196 VVDLPA 201 (1102)
Q Consensus 196 l~~~~~ 201 (1102)
+|++..
T Consensus 348 iw~~~~ 353 (357)
T 3i2n_A 348 VLIVTK 353 (357)
T ss_dssp EEEECC
T ss_pred EEECCC
Confidence 998754
No 96
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.53 E-value=0.11 Score=55.63 Aligned_cols=180 Identities=12% Similarity=0.099 Sum_probs=101.0
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
..|+|.|.| +||+.. +..|.+|+ .+|-...-|.+..+ ...|..++|++|++.||... ....|.+|..
T Consensus 29 ~~l~WS~~~-~lAvg~-------D~tV~iWd~~tg~~~~~~~~~~~-~~~V~~v~~~~~~~~l~sgs---~Dg~v~iw~~ 96 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVAL-------DNSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGT---SSAEVQLWDV 96 (318)
T ss_dssp BCEEECTTS-EEEEEE-------TTEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEE---TTSEEEEEET
T ss_pred eEEEECCCC-EEEEEe-------CCEEEEEECCCCCEEEEEEecCC-CCeEEEEEECCCCCEEEEEE---CCCcEEEeec
Confidence 358999865 888864 45899998 46766666766543 33699999999999999865 2347999999
Q ss_pred ccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE----------------Eeeee-cCCcEEEE-Ee
Q 001314 82 SNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI----------------WTTAV-MENSTALV-ID 142 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~----------------w~~~~-~d~~~vaV-ID 142 (1102)
.+..-. +.+.. .... .++.+++ ..|..+...|.+...+.. ..... .+...++. -+
T Consensus 97 ~~~~~~--~~~~~-h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 170 (318)
T 4ggc_A 97 QQQKRL--RNMTS-HSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGN 170 (318)
T ss_dssp TTTEEE--EEEEC-CSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCceeE--EEecC-ccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEec
Confidence 887621 12211 1111 2233333 225554444443322211 00001 12223333 22
Q ss_pred CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEE--EeCCceEEEecCC
Q 001314 143 GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAI--LSDGCLCVVDLPA 201 (1102)
Q Consensus 143 G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~v--l~~~~l~l~~~~~ 201 (1102)
..+|++-.++..--..............|..+++++.... .+.+. ..++++.+|+...
T Consensus 171 d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~i~lwd~~~ 230 (318)
T 4ggc_A 171 DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN-VLATGGGTSDRHIRIWNVCS 230 (318)
T ss_dssp TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT-EEEEEECTTTCEEEEEETTT
T ss_pred CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc-EEEEEecCCCCEEEEEeccc
Confidence 3356666666543333334444455667889999886543 33222 2346788887643
No 97
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.46 E-value=0.017 Score=66.54 Aligned_cols=110 Identities=13% Similarity=0.115 Sum_probs=70.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
.++|.|.|+.||.+... +.+..|.+|+-.+-+.-.+ .. ....+..++|++||..||+....+....|.+|...+
T Consensus 183 ~~~~Spdg~~la~~s~~---~~~~~i~~~d~~tg~~~~l--~~-~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~ 256 (415)
T 2hqs_A 183 SPAWSPDGSKLAYVTFE---SGRSALVIQTLANGAVRQV--AS-FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS 256 (415)
T ss_dssp EEEECTTSSEEEEEECT---TSSCEEEEEETTTCCEEEE--EC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT
T ss_pred eeEEcCCCCEEEEEEec---CCCcEEEEEECCCCcEEEe--ec-CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC
Confidence 57999999999998742 1246899999765433322 21 123688999999999999776434445799999877
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEee-CCcEEEE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTL-DGQITTY 124 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~-~g~~~~~ 124 (1102)
-.. ..+. ..... .++.|+|.... |++.+. +|...++
T Consensus 257 ~~~---~~l~-~~~~~~~~~~~spdg~~-l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 257 GQI---RQVT-DGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVY 294 (415)
T ss_dssp CCE---EECC-CCSSCEEEEEECTTSSE-EEEEECTTSSCEEE
T ss_pred CCE---EeCc-CCCCcccceEECCCCCE-EEEEECCCCCcEEE
Confidence 552 2221 11122 45899998765 555443 3433333
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.46 E-value=0.0034 Score=69.22 Aligned_cols=183 Identities=16% Similarity=0.212 Sum_probs=103.1
Q ss_pred ceeecc--CCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCC--CCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMP--SGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCM--SDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrP--sGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~D--S~iLAv~~~~~~~~~vqL 78 (1102)
+++|.| .|++||+.. .+..|.+|+-+ |...-.+.+++. ...|..++|++| +.+||..- ....|.+
T Consensus 62 ~v~~~~~~~~~~l~s~s------~D~~v~iWd~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~g~~lasgs---~D~~i~l 131 (316)
T 3bg1_A 62 QVAWAHPMYGNILASCS------YDRKVIIWREENGTWEKSHEHAGH-DSSVNSVCWAPHDYGLILACGS---SDGAISL 131 (316)
T ss_dssp EEEECCGGGSSCEEEEE------TTSCEEEECCSSSCCCEEEEECCC-SSCCCEEEECCTTTCSCEEEEC---SSSCEEE
T ss_pred EEEeCCCCCCCEEEEEE------CCCEEEEEECCCCcceEEEEccCC-CCceEEEEECCCCCCcEEEEEc---CCCCEEE
Confidence 478975 499999876 35689999854 321122333332 236999999998 77888753 2347999
Q ss_pred EEcccc-eEEEEEEEEeccCCC-ceEEecCCCC----------------ceEEEEeeCCcEEEEEEE----E--------
Q 001314 79 CFFSNN-HWYLKYEIRYLRRDG-IRFMWHPTKP----------------LQLICWTLDGQITTYNFI----W-------- 128 (1102)
Q Consensus 79 Wt~~NY-HWYLKqei~~~~~~~-~~~~W~~e~p----------------l~L~i~t~~g~~~~~~~~----w-------- 128 (1102)
|....- .|-++..+. +.... .++.|+|... ..|+.+..+|.+.+.+.. |
T Consensus 132 wd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~ 210 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINN-AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA 210 (316)
T ss_dssp EEECSSSCEEECCBTT-SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC
T ss_pred EecCCCCCcceeeeec-cccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc
Confidence 998764 453322111 11122 3478887631 235555555555554432 1
Q ss_pred ------eeeec-CC----cEEEE-EeCCeEEeccCCCCC--CCCcccccccccCCceeEEEEecCCCCceEEEEEeCCce
Q 001314 129 ------TTAVM-EN----STALV-IDGSKILVTPLSLSL--MPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCL 194 (1102)
Q Consensus 129 ------~~~~~-d~----~~vaV-IDG~~l~lTp~r~a~--VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l 194 (1102)
.+..+ +. ..++. -+..+|++=.++... ..++... -.....|.+|+|++++. .|+..-.|+++
T Consensus 211 h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~--~~~~~~v~~v~~sp~g~--~las~~~D~~v 286 (316)
T 3bg1_A 211 HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLL--HKFNDVVWHVSWSITAN--ILAVSGGDNKV 286 (316)
T ss_dssp CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEE--EECSSCEEEEEECTTTC--CEEEEESSSCE
T ss_pred CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhh--hcCCCcEEEEEEcCCCC--EEEEEcCCCeE
Confidence 11111 11 23333 223356665554311 1111111 13467899999998753 57777889999
Q ss_pred EEEecCC
Q 001314 195 CVVDLPA 201 (1102)
Q Consensus 195 ~l~~~~~ 201 (1102)
.+|+...
T Consensus 287 ~lw~~~~ 293 (316)
T 3bg1_A 287 TLWKESV 293 (316)
T ss_dssp EEEEECT
T ss_pred EEEEECC
Confidence 9998653
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.46 E-value=0.0049 Score=67.53 Aligned_cols=186 Identities=8% Similarity=0.043 Sum_probs=106.9
Q ss_pred ceeeccC---CCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeee------eecCCCCeEEEEEeeCCCC
Q 001314 4 VLEWMPS---GANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELL------KWNCMSDLLAAVVRFEEYD 74 (1102)
Q Consensus 4 ~LsWrPs---GnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L------~Wn~DS~iLAv~~~~~~~~ 74 (1102)
+++|.|. |++||+.. .+..|.+|+-+..+.-...++.. ...|..+ +|++|+..|+... ...
T Consensus 70 ~~~~~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~s~~~~~l~~~~---~d~ 139 (357)
T 3i2n_A 70 CGTFGATSLQQRYLATGD------FGGNLHIWNLEAPEMPVYSVKGH-KEIINAIDGIGGLGIGEGAPEIVTGS---RDG 139 (357)
T ss_dssp EEECTTCCTTTCCEEEEE------TTSCEEEECTTSCSSCSEEECCC-SSCEEEEEEESGGGCC-CCCEEEEEE---TTS
T ss_pred EEEEcCCCCCCceEEEec------CCCeEEEEeCCCCCccEEEEEec-ccceEEEeeccccccCCCccEEEEEe---CCC
Confidence 5789997 79999876 35689999876544222233332 2346666 6789999998764 244
Q ss_pred eEEEEEcccceEEEEEEEEeccC--C-C-ceEE----ecCCCCceEEEEeeCCcEEEEEEE-----E---------eeee
Q 001314 75 SVKICFFSNNHWYLKYEIRYLRR--D-G-IRFM----WHPTKPLQLICWTLDGQITTYNFI-----W---------TTAV 132 (1102)
Q Consensus 75 ~vqLWt~~NYHWYLKqei~~~~~--~-~-~~~~----W~~e~pl~L~i~t~~g~~~~~~~~-----w---------~~~~ 132 (1102)
.|.+|...+..-.+ +.+..... . . .++. |++...+ |++++.+|.+.+++.. + .+..
T Consensus 140 ~i~vwd~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~ 217 (357)
T 3i2n_A 140 TVKVWDPRQKDDPV-ANMEPVQGENKRDCWTVAFGNAYNQEERV-VCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEF 217 (357)
T ss_dssp CEEEECTTSCSSCS-EEECCCTTSCCCCEEEEEEECCCC-CCCE-EEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCCCCcc-eeccccCCCCCCceEEEEEEeccCCCCCE-EEEEccCCeEEEEECccCceeeecCCCCceEEEEc
Confidence 79999988765211 22222111 1 2 2355 6676655 7777777887776632 1 1111
Q ss_pred c----CCcEEEEE-eCCeEEeccCCCCCCCCccccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 133 M----ENSTALVI-DGSKILVTPLSLSLMPPPMYLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 133 ~----d~~~vaVI-DG~~l~lTp~r~a~VPPPM~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+ +...+++. ....|.+-.++.......+....+ .-...|.+++|++++. ..+++...++.+.+|++...
T Consensus 218 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 218 DRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR-ELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp SCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE-EEEEEEETTSEEEEEEEECC
T ss_pred CCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC-cEEEEEeCCCcEEEeecCCC
Confidence 2 33444443 234566655554311111111111 3466899999998642 25666678899999998653
No 100
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.44 E-value=0.0094 Score=73.21 Aligned_cols=176 Identities=14% Similarity=0.136 Sum_probs=109.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+- .|.....|. + ....|..++|++|+..|+..- ....|.+|...
T Consensus 435 ~v~~s~~g~~l~sgs------~Dg~v~vwd~~~~~~~~~~~--~-h~~~v~~~~~s~~~~~l~s~s---~D~~i~iwd~~ 502 (694)
T 3dm0_A 435 DVVLSSDGQFALSGS------WDGELRLWDLAAGVSTRRFV--G-HTKDVLSVAFSLDNRQIVSAS---RDRTIKLWNTL 502 (694)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTTTEEEEEEE--C-CSSCEEEEEECTTSSCEEEEE---TTSCEEEECTT
T ss_pred EEEECCCCCEEEEEe------CCCcEEEEECCCCcceeEEe--C-CCCCEEEEEEeCCCCEEEEEe---CCCEEEEEECC
Confidence 579999999999876 3578999984 454444443 2 123699999999999998764 23479999875
Q ss_pred cceEEEEEEEEecc---CCC-ceEEecCCCC-ceEEEEeeCCcEEEEEEE---------------Eeeeec-CCcEEEEE
Q 001314 83 NNHWYLKYEIRYLR---RDG-IRFMWHPTKP-LQLICWTLDGQITTYNFI---------------WTTAVM-ENSTALVI 141 (1102)
Q Consensus 83 NYHWYLKqei~~~~---~~~-~~~~W~~e~p-l~L~i~t~~g~~~~~~~~---------------w~~~~~-d~~~vaVI 141 (1102)
.-. +..+.... .+. .++.|+|... ..|+.++.+|.+.+++.. +.++.+ |...++.-
T Consensus 503 ~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg 579 (694)
T 3dm0_A 503 GEC---KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 579 (694)
T ss_dssp SCE---EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCc---ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 543 33332211 122 3589998753 346666777887776532 111122 22333332
Q ss_pred -eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 142 -DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 142 -DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+..+|++-.++.. -....+..++.|.+++|+++.. +.+..+++++.+|++...
T Consensus 580 ~~Dg~i~iwd~~~~-----~~~~~~~~~~~v~~~~~sp~~~---~l~~~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 580 GKDGVVLLWDLAEG-----KKLYSLEANSVIHALCFSPNRY---WLCAATEHGIKIWDLESK 633 (694)
T ss_dssp ETTSBCEEEETTTT-----EEEECCBCSSCEEEEEECSSSS---EEEEEETTEEEEEETTTT
T ss_pred eCCCeEEEEECCCC-----ceEEEecCCCcEEEEEEcCCCc---EEEEEcCCCEEEEECCCC
Confidence 2234555555442 1234455677899999988642 344567888999998653
No 101
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.44 E-value=0.002 Score=76.67 Aligned_cols=161 Identities=9% Similarity=-0.120 Sum_probs=92.4
Q ss_pred hHHHhhhcHHHHHHHHHHc---CCCc---HHHHHHHHHHHhcchHHHHhccC-----CcHhHHHHHHHHHHHHhcccChH
Q 001314 716 TIDLRLQRFENALKHIVSM---GDSY---HADCLNLMKKYAQLFPLGLKLIT-----DPAKMEQVLEAWADHLSDVKCFE 784 (1102)
Q Consensus 716 ~Id~~LkryekAl~hl~~~---g~~~---~deAie~~~~~~~Ly~~AL~L~~-----d~~~~~~i~~~yAd~L~~~~~~e 784 (1102)
.+...+|++++|+..+.++ .++. ......++.+. +.|++|++++. +|. ....+...|.-+...++++
T Consensus 347 ~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~ 424 (597)
T 2xpi_A 347 ASLHESGEKNKLYLISNDLVDRHPEKAVTWLAVGIYYLCV-NKISEARRYFSKSSTMDPQ-FGPAWIGFAHSFAIEGEHD 424 (597)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHCTTSHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHH
T ss_pred HHHHHhCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHH
Confidence 4444577777777776654 1111 11223344555 67777777661 222 2235556677777777777
Q ss_pred HHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhcC-CChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcC
Q 001314 785 DAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLLK-LGKDEVAKLAQELCEELQALGKPGEAAKIALDYCG 855 (1102)
Q Consensus 785 eAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l~-~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylg 855 (1102)
+|..+|.++-. +-....+|.+.|++++|+.+..+.- ..+.. ...+..++..+...|++++|..+|.+.+.
T Consensus 425 ~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~~g~~~~A~~~~~~~~~ 503 (597)
T 2xpi_A 425 QAISAYTTAARLFQGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYD-PLLLNELGVVAFNKSDMQTAINHFQNALL 503 (597)
T ss_dssp HHHHHHHHHHHTTTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 77777775411 2234466777777777766554420 01111 23566677777778888888777755321
Q ss_pred -------CH-------HHHHHHHHHhcCHHHHHHHHHh
Q 001314 856 -------DV-------TNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 856 -------D~-------e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
++ .....+|++.+++++|+....+
T Consensus 504 ~~~~~~~~p~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 541 (597)
T 2xpi_A 504 LVKKTQSNEKPWAATWANLGHAYRKLKMYDAAIDALNQ 541 (597)
T ss_dssp HHHHSCCCSGGGHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hhhccccchhhHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 21 2345677777888887766544
No 102
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.40 E-value=0.18 Score=54.51 Aligned_cols=179 Identities=10% Similarity=0.024 Sum_probs=100.3
Q ss_pred cCCCeEEEEeeccCCCCCCeEEEEecC--CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc--cc
Q 001314 9 PSGANIAAVYDRKSENKCPSIVFYERN--GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS--NN 84 (1102)
Q Consensus 9 PsGnlIA~~qr~~~~~~~~~VvFFERN--GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~--NY 84 (1102)
|.+.++.++.. ....|.+|+-+ |-..---.++ ....+..++|++|+..|++.. .....|.+|... +-
T Consensus 2 ~~~~~l~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~--~~~~~v~~~~~~~~~~ 72 (343)
T 1ri6_A 2 SLKQTVYIASP-----ESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKRYLYVGV--RPEFRVLAYRIAPDDG 72 (343)
T ss_dssp CCEEEEEEEEG-----GGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSSEEEEEE--TTTTEEEEEEECTTTC
T ss_pred CceEEEEEeCC-----CCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCCEEEEee--cCCCeEEEEEecCCCC
Confidence 44555555432 24688899775 4211111111 233688899999999998875 333789999987 55
Q ss_pred eEEEEEEEEeccCCCceEEecCCCCceEEEEee-CCcEEEEEE---E-Eeee-------------ec-CCcEEEEEe--C
Q 001314 85 HWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTL-DGQITTYNF---I-WTTA-------------VM-ENSTALVID--G 143 (1102)
Q Consensus 85 HWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~-~g~~~~~~~---~-w~~~-------------~~-d~~~vaVID--G 143 (1102)
.+-....+..+. ....+.|+|.... |++... +|.+.+++. . .... .+ |...++|.+ .
T Consensus 73 ~~~~~~~~~~~~-~~~~~~~s~dg~~-l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 150 (343)
T 1ri6_A 73 ALTFAAESALPG-SLTHISTDHQGQF-VFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ 150 (343)
T ss_dssp CEEEEEEEECSS-CCSEEEECTTSSE-EEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG
T ss_pred ceeeccccccCC-CCcEEEEcCCCCE-EEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCC
Confidence 544444444322 2246899998876 555443 567888776 2 1110 12 333556654 3
Q ss_pred CeEEeccCCC-CCCCCccc--ccccccCCceeEEEEecCCCCceEEEEE-eCCceEEEecCC
Q 001314 144 SKILVTPLSL-SLMPPPMY--LFSLKFPTAVTEMAFYSKSSKNCLAAIL-SDGCLCVVDLPA 201 (1102)
Q Consensus 144 ~~l~lTp~r~-a~VPPPM~--~~~l~~~~~i~~vaf~~~~~~~~~a~vl-~~~~l~l~~~~~ 201 (1102)
.+|.+-.+.. ..+ -+.. .........+.+++|++++. .+++.. .++.+.+|.+..
T Consensus 151 ~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~pdg~--~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 151 DRICLFTVSDDGHL-VAQDPAEVTTVEGAGPRHMVFHPNEQ--YAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp TEEEEEEECTTSCE-EEEEEEEEECSTTCCEEEEEECTTSS--EEEEEETTTTEEEEEESSC
T ss_pred CEEEEEEecCCCce-eeecccccccCCCCCcceEEECCCCC--EEEEEeCCCCEEEEEEecC
Confidence 4555544443 111 0000 11122334677899988653 344433 568899999853
No 103
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.38 E-value=0.0055 Score=78.34 Aligned_cols=104 Identities=9% Similarity=0.074 Sum_probs=74.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
+++|.|.|++||+.. .+..|.+|+..+.+. .+.++ ....|..|+|++ +..||..- ....|.+|...+
T Consensus 22 ~lafspdg~~lAsgs------~Dg~I~lw~~~~~~~-~~~~~--~~~~V~~l~fsp-g~~L~S~s---~D~~v~lWd~~~ 88 (902)
T 2oaj_A 22 AAAFDFTQNLLAIAT------VTGEVHIYGQQQVEV-VIKLE--DRSAIKEMRFVK-GIYLVVIN---AKDTVYVLSLYS 88 (902)
T ss_dssp EEEEETTTTEEEEEE------TTSEEEEECSTTCEE-EEECS--SCCCEEEEEEET-TTEEEEEE---TTCEEEEEETTT
T ss_pred EEEECCCCCEEEEEe------CCCEEEEEeCCCcEE-EEEcC--CCCCEEEEEEcC-CCEEEEEE---CcCeEEEEECCC
Confidence 689999999999976 356899999877543 23333 244799999999 77776653 346899999987
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYN 125 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~ 125 (1102)
..- .+.+. .... .++.|+|...+ |++++.+|.+.+++
T Consensus 89 ~~~--~~~~~--~~~~V~~v~~sp~g~~-l~sgs~dg~V~lwd 126 (902)
T 2oaj_A 89 QKV--LTTVF--VPGKITSIDTDASLDW-MLIGLQNGSMIVYD 126 (902)
T ss_dssp CSE--EEEEE--CSSCEEEEECCTTCSE-EEEEETTSCEEEEE
T ss_pred CcE--EEEEc--CCCCEEEEEECCCCCE-EEEEcCCCcEEEEE
Confidence 652 22332 2233 45899998766 88888888887765
No 104
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.38 E-value=0.034 Score=63.11 Aligned_cols=207 Identities=9% Similarity=0.061 Sum_probs=112.8
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCc-ceeeeecCC--ccccceeeeeecCCCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGL-ERSSFDINE--QIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGL-rhgeF~L~~--~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt 80 (1102)
+++|.|.|.++++.. ....|.+|+-++- ....+..+. .....|..++|++|+.+|+... ....|.+|.
T Consensus 127 ~~~~s~~~~~~~~~~------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~---~d~~v~~~d 197 (433)
T 3bws_A 127 SVRFIDNTRLAIPLL------EDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQM---QANAVHVFD 197 (433)
T ss_dssp CCEESSSSEEEEEBT------TSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG---GGTEEEEEE
T ss_pred EEEEeCCCeEEEEeC------CCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEEC---CCCEEEEEE
Confidence 589999666666643 2457999987643 332221111 1123689999999999888753 345899999
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Ee---------eeec-CCcEEEEEe--
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WT---------TAVM-ENSTALVID-- 142 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~---------~~~~-d~~~vaVID-- 142 (1102)
..+... ...+.. .... .++.|+|....-+.....+|.+..++.. +. +..+ |...+++..
T Consensus 198 ~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 198 LKTLAY--KATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp TTTCCE--EEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEE
T ss_pred CCCceE--EEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECC
Confidence 877552 223321 1222 4589999887633333346777765531 11 1111 222333322
Q ss_pred -------CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEE-EeCCceEEEecCCCCccccccCCcee
Q 001314 143 -------GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAI-LSDGCLCVVDLPAPDMLEDLEGTEFV 214 (1102)
Q Consensus 143 -------G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~v-l~~~~l~l~~~~~~~~~~~l~~~~~~ 214 (1102)
..+|.+-.++.. .+ ...+..+..+.+++|++++. .+.+. ..++.+.+|+....... .
T Consensus 275 ~~~~~~~dg~i~~~d~~~~---~~--~~~~~~~~~~~~~~~~~~g~--~l~~~~~~~~~v~v~d~~~~~~~--------~ 339 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKE---KL--IDTIGPPGNKRHIVSGNTEN--KIYVSDMCCSKIEVYDLKEKKVQ--------K 339 (433)
T ss_dssp SCTTCSCCEEEEEEETTTT---EE--EEEEEEEECEEEEEECSSTT--EEEEEETTTTEEEEEETTTTEEE--------E
T ss_pred CCccccCCCeEEEEECCCC---cE--EeeccCCCCcceEEECCCCC--EEEEEecCCCEEEEEECCCCcEE--------E
Confidence 123444444332 11 11223345678899988653 33333 56788999987532111 0
Q ss_pred eeeeccccccCceEEEEEecCceEEEEE
Q 001314 215 VEACISETAFGSVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 215 ~~~~~~~~~~~~~~~~~w~~~~~ll~~~ 242 (1102)
.+ .....+..++|..++..+.+.
T Consensus 340 ---~~--~~~~~~~~~~~s~dg~~l~~~ 362 (433)
T 3bws_A 340 ---SI--PVFDKPNTIALSPDGKYLYVS 362 (433)
T ss_dssp ---EE--ECSSSEEEEEECTTSSEEEEE
T ss_pred ---Ee--cCCCCCCeEEEcCCCCEEEEE
Confidence 00 112356778888777655443
No 105
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.36 E-value=0.0099 Score=67.71 Aligned_cols=138 Identities=7% Similarity=0.005 Sum_probs=66.4
Q ss_pred hchhHHHhhhcHHHHHHHHHHc---CCCcH---HHHHHHHHHHhcchHHHHhccC-----CcHhHHHHHHHHHHHHhccc
Q 001314 713 MRYTIDLRLQRFENALKHIVSM---GDSYH---ADCLNLMKKYAQLFPLGLKLIT-----DPAKMEQVLEAWADHLSDVK 781 (1102)
Q Consensus 713 rr~~Id~~LkryekAl~hl~~~---g~~~~---deAie~~~~~~~Ly~~AL~L~~-----d~~~~~~i~~~yAd~L~~~~ 781 (1102)
....+....|+|++|+..|.++ .+... -....+.... +.|++|++.+. +|. ...++...|..+...+
T Consensus 148 ~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 225 (450)
T 2y4t_A 148 SQALNAFGSGDYTAAIAFLDKILEVCVWDAELRELRAECFIKE-GEPRKAISDLKAASKLKND-NTEAFYKISTLYYQLG 225 (450)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCGGGGHHHHHHHHHHHCS-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHC-CCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcC
Confidence 3344455577777777777654 22111 1112223444 56666666651 111 1234555566666666
Q ss_pred ChHHHHHHHHHcCC----HHHH----------------HHHHHHcCCHHHHHHHHhhc----CCChHHHHHHHHHHHHHH
Q 001314 782 CFEDAATTYFCCSS----LEKA----------------MKAYRASGNWSGVLTVAGLL----KLGKDEVAKLAQELCEEL 837 (1102)
Q Consensus 782 ~~eeAa~~Y~~ag~----~ekA----------------l~~y~~ag~W~~al~lA~~l----~~~~~el~~l~~~lA~~L 837 (1102)
++++|..+|.++-. ...+ ..+|...|+|++|+....+. +.++.....+...+|..+
T Consensus 226 ~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~ 305 (450)
T 2y4t_A 226 DHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCF 305 (450)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHH
Confidence 66666666655411 0111 34455555555555443321 111111223455555556
Q ss_pred HHcCChHHHHHHHHH
Q 001314 838 QALGKPGEAAKIALD 852 (1102)
Q Consensus 838 ~~~g~~~eAa~i~l~ 852 (1102)
...|++.+|...+.+
T Consensus 306 ~~~g~~~~A~~~~~~ 320 (450)
T 2y4t_A 306 SKDEKPVEAIRVCSE 320 (450)
T ss_dssp HTTTCHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHH
Confidence 666666666555533
No 106
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=97.34 E-value=0.012 Score=64.11 Aligned_cols=165 Identities=9% Similarity=0.032 Sum_probs=96.4
Q ss_pred hhhchhHHHhhhcHHHHHHHHHHc---CCCcHH---HHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhc
Q 001314 711 LLMRYTIDLRLQRFENALKHIVSM---GDSYHA---DCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSD 779 (1102)
Q Consensus 711 ~~rr~~Id~~LkryekAl~hl~~~---g~~~~d---eAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~ 779 (1102)
.+....+...+|+|++|+..|.++ .+...+ ..-...... +.|++|++.+ .+|. ...++...|..+..
T Consensus 123 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~ 200 (359)
T 3ieg_A 123 LRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKE-GEPRKAISDLKAASKLKSD-NTEAFYKISTLYYQ 200 (359)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHTTCSC-CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHC-CCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHH
Confidence 344456777788899998888774 222111 112223455 7788888776 1222 23566677787888
Q ss_pred ccChHHHHHHHHHcCC----HHH----------------HHHHHHHcCCHHHHHHHHhhc----CCChHHHHHHHHHHHH
Q 001314 780 VKCFEDAATTYFCCSS----LEK----------------AMKAYRASGNWSGVLTVAGLL----KLGKDEVAKLAQELCE 835 (1102)
Q Consensus 780 ~~~~eeAa~~Y~~ag~----~ek----------------Al~~y~~ag~W~~al~lA~~l----~~~~~el~~l~~~lA~ 835 (1102)
.+++++|...|.++-. ... ...+|...|+|++|+....+. +.+..-.......+|.
T Consensus 201 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~ 280 (359)
T 3ieg_A 201 LGDHELSLSEVRECLKLDQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKTEPSVAEYTVRSKERICH 280 (359)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHH
Confidence 8888888887776621 111 134466677777776655431 2222222344556777
Q ss_pred HHHHcCChHHHHHHHHHhcC----CHH---HHHHHHHHhcCHHHHHHHH
Q 001314 836 ELQALGKPGEAAKIALDYCG----DVT---NGISLLIDARDWEEALRVA 877 (1102)
Q Consensus 836 ~L~~~g~~~eAa~i~l~ylg----D~e---~AI~~y~~~~~W~eA~rLa 877 (1102)
.+...|++.+|..+|.+.+. +++ .-..+|.+.++|++|+...
T Consensus 281 ~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~ 329 (359)
T 3ieg_A 281 CFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAIQDY 329 (359)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 77778888888777754321 221 2345566667777776543
No 107
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.0045 Score=70.74 Aligned_cols=186 Identities=11% Similarity=0.063 Sum_probs=107.0
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCcceee-eecC--CccccceeeeeecCCCCeEEEEEeeCCCCeEEEE
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGLERSS-FDIN--EQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKIC 79 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGLrhge-F~L~--~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLW 79 (1102)
+++|.| .|++||+.. .+..|.+|+-+.+..+. +... ......|..++|++|++.|+... ....|.+|
T Consensus 68 ~~~~s~~~~~~l~s~s------~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s---~dg~i~vw 138 (437)
T 3gre_A 68 SSAVSPGETPYLITGS------DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS---KDGQIIVL 138 (437)
T ss_dssp EEEEECSSSCEEEEEE------TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE---TTSEEEEE
T ss_pred EEEECCCCCCEEEEec------CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe---CCCEEEEE
Confidence 588999 999999976 35689999876643333 1111 11234699999999999999875 24589999
Q ss_pred Ecc-----cceEEEE----EEEEecc---CCC-ceE--EecCCCCceEEEEeeCCcEEEEEEE-----Eeee--------
Q 001314 80 FFS-----NNHWYLK----YEIRYLR---RDG-IRF--MWHPTKPLQLICWTLDGQITTYNFI-----WTTA-------- 131 (1102)
Q Consensus 80 t~~-----NYHWYLK----qei~~~~---~~~-~~~--~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~~-------- 131 (1102)
... ...-+++ ..+.+.. ... +++ .|++...+ |+.++.+|.+.+++.. +...
T Consensus 139 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v 217 (437)
T 3gre_A 139 KVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSL-LVALTNLSRVIIFDIRTLERLQIIENSPRHGAV 217 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEE-EEEEETTSEEEEEETTTCCEEEEEECCGGGCCE
T ss_pred EeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCE-EEEEeCCCeEEEEeCCCCeeeEEEccCCCCCce
Confidence 774 1111222 2233322 122 233 35555544 7777777777766532 1111
Q ss_pred ----ec-CCcEEEEEe-CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCC--ceEEEEEeCCceEEEecCCC
Q 001314 132 ----VM-ENSTALVID-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSK--NCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 132 ----~~-d~~~vaVID-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~--~~~a~vl~~~~l~l~~~~~~ 202 (1102)
.+ +...+++-. ..+|.+-.++. .-++....+.-..+|.+++|++..+. ..+++-..++++.+|++...
T Consensus 218 ~~~~~s~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 218 SSICIDEECCVLILGTTRGIIDIWDIRF---NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTT---TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTT
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEcCC---ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCC
Confidence 11 222333322 23366666654 23333333334557899988765332 34555566788999998653
No 108
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.30 E-value=0.0014 Score=74.54 Aligned_cols=158 Identities=14% Similarity=0.129 Sum_probs=96.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+++|.|.|++||+.. .+..|.+|+ |+|-.-..|. +......+..+.|++|+.+|++.........|.+|...
T Consensus 181 ~~~~~~~~~~l~~~~------~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 181 SVDWSRDGALICTSC------RDKRVRVIEPRKGTVVAEKD-RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp EEEECTTSSCEEEEE------TTSEEEEEETTTTEEEEEEE-CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred EEEECCCCCEEEEEe------cCCcEEEEeCCCCceeeeec-cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 589999999999986 356899999 5555544442 22233458899999999999987422235589999998
Q ss_pred cceEEEEEEEEeccCCC-ceEEecCCCCceEE-EEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCCCcc
Q 001314 83 NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLI-CWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPPPM 160 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~-i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPPPM 160 (1102)
+..--++ ......... ..+.|+|.... |+ .+..+|.+.++++ .. |. |..-
T Consensus 254 ~~~~~~~-~~~~~~~~~v~~~~~s~~~~~-l~~~g~~dg~i~i~d~----~~----------~~------------~~~~ 305 (402)
T 2aq5_A 254 HLEEPLS-LQELDTSSGVLLPFFDPDTNI-VYLCGKGDSSIRYFEI----TS----------EA------------PFLH 305 (402)
T ss_dssp BCSSCSE-EEECCCCSSCEEEEEETTTTE-EEEEETTCSCEEEEEE----CS----------ST------------TCEE
T ss_pred cccCCce-EEeccCCCceeEEEEcCCCCE-EEEEEcCCCeEEEEEe----cC----------CC------------cceE
Confidence 8652111 222222333 45899998776 44 3434666665432 21 11 0000
Q ss_pred cccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 161 YLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 161 ~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
.........+|.+++|+++.. .++..++.+.+|.+.
T Consensus 306 ~l~~~~~~~~v~~~~~sp~~~----~~~s~~~~~~~~~l~ 341 (402)
T 2aq5_A 306 YLSMFSSKESQRGMGYMPKRG----LEVNKCEIARFYKLH 341 (402)
T ss_dssp EEEEECCSSCCSEEEECCGGG----SCGGGTEEEEEEEEE
T ss_pred eecccccCCcccceEEecccc----cceecceeEEEEEcC
Confidence 111122346788999988653 223466677777764
No 109
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.0036 Score=64.22 Aligned_cols=124 Identities=15% Similarity=0.058 Sum_probs=90.4
Q ss_pred hhcchHHHHHHHHhccCHHHHHHHHHHhcCCcchhhHHHHHHhcCChhhhc-hhHHHhhhcHHHHHHHHHHcCCCcHHHH
Q 001314 664 WLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMR-YTIDLRLQRFENALKHIVSMGDSYHADC 742 (1102)
Q Consensus 664 fLvDvn~Ly~~ALg~YDl~Lal~VAq~sqkDPkEYLpfL~~L~~le~~~rr-~~Id~~LkryekAl~hl~~~g~~~~deA 742 (1102)
|-.|.+.=|+-||..=||+.|+.+|... .++ ..|++ .......|++ +-|
T Consensus 4 ~~~D~~~rF~LAL~lg~l~~A~e~a~~l-~~~--------------~~Wk~Lg~~AL~~gn~---------------~lA 53 (177)
T 3mkq_B 4 FVQDPHIRFDLALEYGNLDAALDEAKKL-NDS--------------ITWERLIQEALAQGNA---------------SLA 53 (177)
T ss_dssp TSSCHHHHHHHHHHTTCHHHHHHHHHHH-CCH--------------HHHHHHHHHHHHTTCH---------------HHH
T ss_pred ccCChHHHHHHHHhcCCHHHHHHHHHHh-CCH--------------HHHHHHHHHHHHcCCh---------------HHH
Confidence 5578888999999999999998888754 121 22322 2333334444 444
Q ss_pred HHHHHHHhcchHHHHhcc---CCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhc
Q 001314 743 LNLMKKYAQLFPLGLKLI---TDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLL 819 (1102)
Q Consensus 743 ie~~~~~~~Ly~~AL~L~---~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l 819 (1102)
.+.+.+. +.|...+=|| ++.+.+. ..|+--+.++++.-|...|...|++++++++|.++|.|.+|..+|+.+
T Consensus 54 e~cy~~~-~D~~~L~~Ly~~tg~~e~L~----kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~~eA~~~A~t~ 128 (177)
T 3mkq_B 54 EMIYQTQ-HSFDKLSFLYLVTGDVNKLS----KMQNIAQTREDFGSMLLNTFYNNSTKERSSIFAEGGSLPLAYAVAKAN 128 (177)
T ss_dssp HHHHHHT-TCHHHHHHHHHHHTCHHHHH----HHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHT
T ss_pred HHHHHHh-CCHHHHHHHHHHhCCHHHHH----HHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHHHHc
Confidence 4444454 5555555555 4555554 366666789999999999999999999999999999999999999998
Q ss_pred CCC
Q 001314 820 KLG 822 (1102)
Q Consensus 820 ~~~ 822 (1102)
+.+
T Consensus 129 g~~ 131 (177)
T 3mkq_B 129 GDE 131 (177)
T ss_dssp TCH
T ss_pred CcH
Confidence 654
No 110
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.29 E-value=0.0047 Score=72.04 Aligned_cols=195 Identities=15% Similarity=0.116 Sum_probs=108.1
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecCCccee-----------eeecC--CccccceeeeeecCCCCeEEEEEe
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERS-----------SFDIN--EQIDSTVELLKWNCMSDLLAAVVR 69 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhg-----------eF~L~--~~~~~~v~~L~Wn~DS~iLAv~~~ 69 (1102)
..|+|.|.+.+||+... ..|.+|.-..++.. .+... .+....|..++||+|+..|||...
T Consensus 40 n~lavs~~~~~l~~~~~-------dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 40 SLLAVSNKYGLVFAGGA-------SGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp BCEEEETTTTEEEEEET-------TEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred cEEEEecCCCEEEEECC-------CEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 35789998888888651 13666543332211 00000 011235999999999999998652
Q ss_pred -eCCCCeEEEEEcccce---EEEE---EEEEecc--CCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEE
Q 001314 70 -FEEYDSVKICFFSNNH---WYLK---YEIRYLR--RDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTAL 139 (1102)
Q Consensus 70 -~~~~~~vqLWt~~NYH---WYLK---qei~~~~--~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~va 139 (1102)
......|++|...+.. +-.+ ..+.... ... .++.|||..+..|+.++.+|.+.+ |++..
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~i----wD~~~------- 181 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAV----LQVTE------- 181 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEE----EEESS-------
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEE----EEcCC-------
Confidence 2334489999986540 0000 1122211 223 358999987766887777777765 43321
Q ss_pred EEeCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeec
Q 001314 140 VIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACI 219 (1102)
Q Consensus 140 VIDG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~ 219 (1102)
| ....+. ......|.+++|++++ +.+++-..+|++.+|+... .....+.. .+ ..
T Consensus 182 ---~-~~~~~~--------------~~~~~~v~~v~wspdg--~~lasgs~dg~v~iwd~~~-~~~~~~~~-~~----~~ 235 (434)
T 2oit_A 182 ---T-VKVCAT--------------LPSTVAVTSVCWSPKG--KQLAVGKQNGTVVQYLPTL-QEKKVIPC-PP----FY 235 (434)
T ss_dssp ---S-EEEEEE--------------ECGGGCEEEEEECTTS--SCEEEEETTSCEEEECTTC-CEEEEECC-CT----TC
T ss_pred ---C-cceeec--------------cCCCCceeEEEEcCCC--CEEEEEcCCCcEEEEccCC-cccccccC-Cc----cc
Confidence 1 000110 0123478999999874 3677778899999998641 11100000 00 00
Q ss_pred cccccCceEEEEEecCceEEEE
Q 001314 220 SETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 220 ~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
.......+..+.|.+++.+++.
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l~~ 257 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFAIV 257 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEEEE
T ss_pred CCCCceeEEEEEEecCceEEEE
Confidence 0011226788999988876654
No 111
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.28 E-value=0.02 Score=60.31 Aligned_cols=154 Identities=9% Similarity=0.002 Sum_probs=85.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCC-cceeeeecCCccccceeeeeecCCCCeEEEEEeeCC-CCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNG-LERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEE-YDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNG-LrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~-~~~vqLWt~ 81 (1102)
+++|.|.|++||+.. +..|.+|+-++ -+.... .+......+..+.|++|+..|++...... ...|..|..
T Consensus 46 ~~~~spdg~~l~~~~-------~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 46 APNWSPDGKYLLLNS-------EGLLYRLSLAGDPSPEKV-DTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp EEEECTTSSEEEEEE-------TTEEEEEESSSCCSCEEC-CCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEET
T ss_pred eeEECCCCCEEEEEc-------CCeEEEEeCCCCCCceEe-ccccccccccceEECCCCCEEEEEEeCCCCcceEEEEEC
Confidence 589999999999975 34888998776 333221 12222346888999999999998763211 223444443
Q ss_pred ccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCCCcc
Q 001314 82 SNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPPPM 160 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPPPM 160 (1102)
..-. ...+..... ..+.|+|....-++....+|.+.+ |.++.. . |....++
T Consensus 118 ~~~~-----~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l----~~~~~~-~-------~~~~~~~----------- 169 (297)
T 2ojh_A 118 TGGT-----PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDI----YSMDID-S-------GVETRLT----------- 169 (297)
T ss_dssp TCCC-----CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEE----EEEETT-T-------CCEEECC-----------
T ss_pred CCCc-----eEEeecCCCccceEECCCCCEEEEEECCCCceEE----EEEECC-C-------CcceEcc-----------
Confidence 3322 111222222 347899887763334444554433 222211 0 1111111
Q ss_pred cccccccCCceeEEEEecCCCCceEEEEE-eCCceEEEecC
Q 001314 161 YLFSLKFPTAVTEMAFYSKSSKNCLAAIL-SDGCLCVVDLP 200 (1102)
Q Consensus 161 ~~~~l~~~~~i~~vaf~~~~~~~~~a~vl-~~~~l~l~~~~ 200 (1102)
..+..+.+++|++++. .+++.. .++.+.+|.+.
T Consensus 170 -----~~~~~~~~~~~s~dg~--~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 170 -----HGEGRNDGPDYSPDGR--WIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp -----CSSSCEEEEEECTTSS--EEEEEECTTSSCEEEEEE
T ss_pred -----cCCCccccceECCCCC--EEEEEecCCCCccEEEEC
Confidence 1234577889988653 344444 36778888764
No 112
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.28 E-value=0.0054 Score=67.01 Aligned_cols=54 Identities=17% Similarity=-0.100 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhcC------C--------HHHHHHHHHHhcCHHHHHHHHHhc
Q 001314 827 AKLAQELCEELQALGKPGEAAKIALDYCG------D--------VTNGISLLIDARDWEEALRVAFMH 880 (1102)
Q Consensus 827 ~~l~~~lA~~L~~~g~~~eAa~i~l~ylg------D--------~e~AI~~y~~~~~W~eA~rLa~~h 880 (1102)
......+|..+...|+|.+|...|.+-+. + .-....+|...+++++|+....+.
T Consensus 158 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 225 (292)
T 1qqe_A 158 NKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEG 225 (292)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45677889999999999999988755321 1 123456677788888888766554
No 113
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.28 E-value=0.015 Score=66.13 Aligned_cols=178 Identities=12% Similarity=-0.040 Sum_probs=103.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeC-----CCCeEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFE-----EYDSVK 77 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~-----~~~~vq 77 (1102)
.++|.|.|+.++++.. .+..|.+|+- +|-....+... ..+..+.|++|+..|++..... ....|.
T Consensus 216 ~~~~~~~~~~l~~~~~-----~~~~i~~~d~~~~~~~~~~~~~----~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 216 ILLYDPIRDLVYCSNW-----ISEDISVIDRKTKLEIRKTDKI----GLPRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp EEEEETTTTEEEEEET-----TTTEEEEEETTTTEEEEECCCC----SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred EEEEcCCCCEEEEEec-----CCCcEEEEECCCCcEEEEecCC----CCceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 5899999998866542 2458999994 55443343332 2589999999999998876432 234799
Q ss_pred EEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEEEE-----Ee---------eeec-CCcEEEEEe
Q 001314 78 ICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYNFI-----WT---------TAVM-ENSTALVID 142 (1102)
Q Consensus 78 LWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~---------~~~~-d~~~vaVID 142 (1102)
+|...+-.- .+.+..+. ....+.|+|.....++..+.+|.+.+++.. +. +..+ |...+++.+
T Consensus 287 ~~d~~~~~~--~~~~~~~~-~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 363 (433)
T 3bws_A 287 IYSMDKEKL--IDTIGPPG-NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSC 363 (433)
T ss_dssp EEETTTTEE--EEEEEEEE-CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEE
T ss_pred EEECCCCcE--EeeccCCC-CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEe
Confidence 999877652 22222211 224589999876534444556667665532 11 1112 222344433
Q ss_pred CC----------------eEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEe-CCceEEEecC
Q 001314 143 GS----------------KILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILS-DGCLCVVDLP 200 (1102)
Q Consensus 143 G~----------------~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~-~~~l~l~~~~ 200 (1102)
.. .|.+-.+... -++ ..+.....+.+++|++++. .+++... ++++.+|++.
T Consensus 364 ~~~~~~~~~~~~~g~~dg~v~~~d~~~~---~~~--~~~~~~~~~~~~~~s~dg~--~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 364 RGPNHPTEGYLKKGLVLGKVYVIDTTTD---TVK--EFWEAGNQPTGLDVSPDNR--YLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CCCCCTTTCTTSCCSSCCEEEEEETTTT---EEE--EEEECSSSEEEEEECTTSC--EEEEEETTTTEEEEEEET
T ss_pred cCCCccccccccccccceEEEEEECCCC---cEE--EEecCCCCCceEEEcCCCC--EEEEEECCCCeEEEEEec
Confidence 22 4444433221 111 1223355688999988653 4544443 8889999864
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.27 E-value=0.017 Score=64.52 Aligned_cols=177 Identities=9% Similarity=0.001 Sum_probs=105.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce-eeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++|.|.|+.|+.+.. ....|.+|+.++-+. ..+.. ...+..++|++|+..|++.. .....|.+|...
T Consensus 78 ~~~~spdg~~l~~~~~-----~~~~v~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~--~~~~~v~~~d~~ 146 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNM-----ASSTLSVIDTTSNTVAGTVKT----GKSPLGLALSPDGKKLYVTN--NGDKTVSVINTV 146 (391)
T ss_dssp EEEECTTSSEEEEEET-----TTTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEE--TTTTEEEEEETT
T ss_pred ceEECCCCCEEEEEEC-----CCCEEEEEECCCCeEEEEEeC----CCCcceEEECCCCCEEEEEe--CCCCEEEEEECC
Confidence 5789999998877652 246899998765332 23222 23588999999999887664 445689999988
Q ss_pred cceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEEEE--------------Eeeeec-CCcEEEEEe----C
Q 001314 83 NNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYNFI--------------WTTAVM-ENSTALVID----G 143 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~~~--------------w~~~~~-d~~~vaVID----G 143 (1102)
+... ...+..+ .....+.|+|....-++....+|.+.+++.. ..+..+ |...+++.. .
T Consensus 147 ~~~~--~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 223 (391)
T 1l0q_A 147 TKAV--INTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYF 223 (391)
T ss_dssp TTEE--EEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSC
T ss_pred CCcE--EEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCC
Confidence 7763 2333322 1224589999876622333445667665531 111112 333444443 3
Q ss_pred CeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEE-EEeCCceEEEecCC
Q 001314 144 SKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAA-ILSDGCLCVVDLPA 201 (1102)
Q Consensus 144 ~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~-vl~~~~l~l~~~~~ 201 (1102)
.+|.+-.++.. -+ ...+.....+.+++|++++. .+.+ ...++.+.+|+...
T Consensus 224 ~~v~~~d~~~~---~~--~~~~~~~~~~~~~~~s~dg~--~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 224 NTVSMIDTGTN---KI--TARIPVGPDPAGIAVTPDGK--KVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp CEEEEEETTTT---EE--EEEEECCSSEEEEEECTTSS--EEEEEETTTTEEEEEETTT
T ss_pred CcEEEEECCCC---eE--EEEEecCCCccEEEEccCCC--EEEEEcCCCCEEEEEECCC
Confidence 45555554432 11 22334455678899988654 3433 24578899998754
No 115
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.26 E-value=0.012 Score=66.99 Aligned_cols=106 Identities=14% Similarity=0.138 Sum_probs=71.1
Q ss_pred ccCCCeEEEEeeccCCCCCCeEEEEecCCcceee-ee---cCCccccceeeeeecC--------CCCeEEEEEeeCCCCe
Q 001314 8 MPSGANIAAVYDRKSENKCPSIVFYERNGLERSS-FD---INEQIDSTVELLKWNC--------MSDLLAAVVRFEEYDS 75 (1102)
Q Consensus 8 rPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhge-F~---L~~~~~~~v~~L~Wn~--------DS~iLAv~~~~~~~~~ 75 (1102)
.|.+++||+.. .+..|.+|.-++-.... .. +++. ...|..++|++ |+.+||-.- ....
T Consensus 98 ~~~~~~las~~------~d~~v~lw~~~~~~~~~~~~~~~~~gH-~~~v~~v~~~p~~~~~~~~d~~~las~s---~D~t 167 (393)
T 4gq1_A 98 PVYSLFLACVC------QDNTVRLIITKNETIITQHVLGGKSGH-HNFVNDIDIADVYSADNRLAEQVIASVG---DDCT 167 (393)
T ss_dssp CEEEEEEEEEE------TTSCEEEEEEETTEEEEEEEECTTTSC-SSCEEEEEEEEEECTTCSEEEEEEEEEE---TTSE
T ss_pred CCCCCEEEEEe------CCCcEEEEECCCCccceeeeecccCCC-CCceEEEEEccccccccCCCCCEEEEEE---CCCe
Confidence 34566788876 36788888755433222 22 2222 33699999997 899999764 2348
Q ss_pred EEEEEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEE
Q 001314 76 VKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNF 126 (1102)
Q Consensus 76 vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~ 126 (1102)
|.||+..+-. +....++.... .++.|||..+..|+.+..+|.+.+++.
T Consensus 168 v~~Wd~~~~~---~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~ 216 (393)
T 4gq1_A 168 LIIWRLTDEG---PILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDW 216 (393)
T ss_dssp EEEEEEETTE---EEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred EEEEECCCCc---eeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEEC
Confidence 9999986654 22222333344 579999998877888888888887663
No 116
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=97.26 E-value=0.0022 Score=74.26 Aligned_cols=138 Identities=10% Similarity=0.189 Sum_probs=110.6
Q ss_pred hcHHHHHHHHHHcCCCcHHHHHHHHHHHhcchHHHHhcc--CCcHhH-HHHHHHHHHHHhcccChHHHHHHHHHcCCHHH
Q 001314 722 QRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI--TDPAKM-EQVLEAWADHLSDVKCFEDAATTYFCCSSLEK 798 (1102)
Q Consensus 722 kryekAl~hl~~~g~~~~deAie~~~~~~~Ly~~AL~L~--~d~~~~-~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ek 798 (1102)
...++.+...+=.|+ ++.|++...+. +.|..||-|. .+++.+ +.+...|-..-..+..+ ...+...-.++++.
T Consensus 144 ~~~d~~I~~aLl~Gd--~e~AV~~cl~~-~r~adAllLA~~gg~el~~~~vq~~Y~~k~~~~~~~-~rll~~iv~~n~~d 219 (399)
T 2pm7_A 144 GNIEQTISKNLVSGN--IKSAVKNSLEN-DLMMEAMVIALDSNNERLKESVKNAYFAKYGSKSSL-SRILYSISKREVDD 219 (399)
T ss_dssp SHHHHHHHHHHHTTC--HHHHHHHHHTT-TCHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTSCHH-HHHHHHHHTTCCHH
T ss_pred hhHHHHHHHHHHcCC--HHHHHHHHHHC-CChHHHHHHHHhcCHHHHHHHHHHHHHHhcccCchH-HHHHHHHHccCHHH
Confidence 456666766666788 99999999998 9999999988 788888 77777666555443344 44577888899988
Q ss_pred HHHHHHHcCCHHHHHHHHhhcCCChH--HHHHHHHHHHHHHHHcCChHHHHHHHHHhcCCHHHHHHHHHH
Q 001314 799 AMKAYRASGNWSGVLTVAGLLKLGKD--EVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLID 866 (1102)
Q Consensus 799 Al~~y~~ag~W~~al~lA~~l~~~~~--el~~l~~~lA~~L~~~g~~~eAa~i~l~ylgD~e~AI~~y~~ 866 (1102)
.+... ...+|++++.+.-.+. +++ +...++..|+++|.+.|+..+|.-+|+= +|++++.+.+..+
T Consensus 220 ~V~~~-~l~~WkE~La~i~t~a-~~e~~ef~~Lc~~LG~RL~~~g~~~~A~lCYi~-Ag~~dk~v~iW~~ 286 (399)
T 2pm7_A 220 LVENL-DVSQWKFISKAIQNLY-PNDIAQRNEMMIKLGDRMKENGHRQDSLTLYLA-AGSLDKVASIWLS 286 (399)
T ss_dssp HHHHB-CGGGHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH-HTCHHHHHHHHHH
T ss_pred HHhcC-ChhhHHHHHHHHHhcC-CccHhHHHHHHHHHHHHHHhCCChhhhhHHHHh-hCCHHHHHHHHHH
Confidence 77764 3557999999887664 566 8899999999999999999888888865 9999999999877
No 117
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=97.19 E-value=0.0014 Score=68.15 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcC-CChHHHHHHHHHHHHHHHHcCChHH
Q 001314 767 EQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLK-LGKDEVAKLAQELCEELQALGKPGE 845 (1102)
Q Consensus 767 ~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~-~~~~el~~l~~~lA~~L~~~g~~~e 845 (1102)
..++...|..+...++|++|..+|.++-....-.+++...|++++++....+.- ..+ ........+|..+...|++.+
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 157 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTEHRTADILTKLRNAEKELKKAEAEAYVNP-EKAEEARLEGKEYFTKSDWPN 157 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhcCchhHHHHHHhHHHHHHHHHHHHHHcCc-chHHHHHHHHHHHHHhcCHHH
Confidence 567788899999999999999999887554444567888888888877765532 233 345678889999999999999
Q ss_pred HHHHHHHhc----CCH---HHHHHHHHHhcCHHHHHHHHHh
Q 001314 846 AAKIALDYC----GDV---TNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 846 Aa~i~l~yl----gD~---e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
|...|.+.+ .++ -....+|.+.++|++|+....+
T Consensus 158 A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 198 (258)
T 3uq3_A 158 AVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNK 198 (258)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 999886533 222 2346678889999999876554
No 118
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.19 E-value=0.009 Score=67.63 Aligned_cols=184 Identities=11% Similarity=0.063 Sum_probs=103.1
Q ss_pred ceeeccC-CCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCc--cccceeeeeecC-CCCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPS-GANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQ--IDSTVELLKWNC-MSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPs-GnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~--~~~~v~~L~Wn~-DS~iLAv~~~~~~~~~vqL 78 (1102)
.+.|.|. ++.|++.. .+..|.+|+ +.|-....|....+ ....|..+.|++ |+++|+..- ....|.+
T Consensus 162 ~~~~~~~~~~~l~s~s------~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs---~D~~v~~ 232 (380)
T 3iz6_a 162 SCQYVPDQETRLITGS------GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGS---CDTTVRL 232 (380)
T ss_dssp CCBCCSSSSSCEEEEC------TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEE---TTSCEEE
T ss_pred EEEEecCCCCEEEEEC------CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEE---CCCeEEE
Confidence 4678885 55677654 356899997 45555555543322 234699999987 888888764 2347999
Q ss_pred EEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------Ee---------------eeec-C
Q 001314 79 CFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------WT---------------TAVM-E 134 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w~---------------~~~~-d 134 (1102)
|+..+..- ..+.+. +.... .++.|+|...+ |+.++.+|.+.+++.. +. ++.+ +
T Consensus 233 wd~~~~~~-~~~~~~-~h~~~v~~v~~~p~~~~-l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 309 (380)
T 3iz6_a 233 WDLRITSR-AVRTYH-GHEGDINSVKFFPDGQR-FGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSIS 309 (380)
T ss_dssp EETTTTCC-CCEEEC-CCSSCCCEEEECTTSSE-EEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSS
T ss_pred EECCCCCc-ceEEEC-CcCCCeEEEEEecCCCe-EEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCC
Confidence 99763320 012221 12223 46899997765 7777778888776532 11 1111 1
Q ss_pred CcEEEEE-eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 135 NSTALVI-DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 135 ~~~vaVI-DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
...+++- +..+|.+=..........+....-.-...|.+++|++++. .++.--.|+++.+|.+..
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~--~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS--ALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS--EEEEECTTSCEEEEECCS
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC--EEEEeeCCCCEEEEecCC
Confidence 1122221 1122333333222111111111112345799999998754 566656789999998753
No 119
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.18 E-value=0.061 Score=60.37 Aligned_cols=21 Identities=14% Similarity=-0.061 Sum_probs=14.1
Q ss_pred chhHHHhhhcHHHHHHHHHHc
Q 001314 714 RYTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 714 r~~Id~~LkryekAl~hl~~~ 734 (1102)
...+...+|+|++|+.+|.++
T Consensus 132 l~~~~~~~g~~~~A~~~~~~a 152 (411)
T 4a1s_A 132 LGNTLKVMGRFDEAAICCERH 152 (411)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHH
Confidence 345556677888887777654
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.17 E-value=0.034 Score=61.86 Aligned_cols=209 Identities=12% Similarity=0.124 Sum_probs=120.5
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCC---eEEEEEeeCCCCeEEE
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSD---LLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~---iLAv~~~~~~~~~vqL 78 (1102)
.++|.| .|+++++.. .+..|.+|+-. |.....|..+. .+..+.|++++. +|++.. ....|.+
T Consensus 104 ~~~~~~~~~~~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~v~~ 170 (408)
T 4a11_B 104 TVQWYPHDTGMFTSSS------FDKTLKVWDTNTLQTADVFNFEE----TVYSHHMSPVSTKHCLVAVGT---RGPKVQL 170 (408)
T ss_dssp EEEECTTCTTCEEEEE------TTSEEEEEETTTTEEEEEEECSS----CEEEEEECSSCSSCCEEEEEE---SSSSEEE
T ss_pred EEEEccCCCcEEEEEe------CCCeEEEeeCCCCccceeccCCC----ceeeeEeecCCCCCcEEEEEc---CCCeEEE
Confidence 578999 888888876 35689999854 44444555443 578888888654 888765 2457999
Q ss_pred EEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE------------------------------
Q 001314 79 CFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI------------------------------ 127 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~------------------------------ 127 (1102)
|+..+..- .+.+. ..... .++.|+|.....|+.++.+|.+.+++..
T Consensus 171 ~d~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (408)
T 4a11_B 171 CDLKSGSC--SHILQ-GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGK 247 (408)
T ss_dssp EESSSSCC--CEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSC
T ss_pred EeCCCcce--eeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCc
Confidence 99877642 12222 11223 4699999988657888888998887651
Q ss_pred -Eeeeec-CCcEEEEEe-CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCc
Q 001314 128 -WTTAVM-ENSTALVID-GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDM 204 (1102)
Q Consensus 128 -w~~~~~-d~~~vaVID-G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~ 204 (1102)
..+..+ +...+++.. ...|.+-.++..-.+..+.............+.+..... +.+++...++.+.+|++.....
T Consensus 248 v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~v~d~~~~~~ 326 (408)
T 4a11_B 248 VNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCS-SEFVFVPYGSTIAVYTVYSGEQ 326 (408)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSS-SCEEEEEETTEEEEEETTTCCE
T ss_pred eeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCC-ceEEEEecCCEEEEEECcCCcc
Confidence 111122 333444443 234666666654322222222111111112222222222 3566778899999999864322
Q ss_pred cccccCCceeeeeeccccccCceEEEEEecCceEEEE
Q 001314 205 LEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLLSV 241 (1102)
Q Consensus 205 ~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll~~ 241 (1102)
...+ ....+.+..+.|..++.+++.
T Consensus 327 ~~~~------------~~~~~~v~~~~~s~~~~~l~s 351 (408)
T 4a11_B 327 ITML------------KGHYKTVDCCVFQSNFQELYS 351 (408)
T ss_dssp EEEE------------CCCSSCEEEEEEETTTTEEEE
T ss_pred eeee------------ccCCCeEEEEEEcCCCCEEEE
Confidence 2111 122345777788877665554
No 121
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.16 E-value=0.015 Score=63.42 Aligned_cols=178 Identities=12% Similarity=0.066 Sum_probs=106.2
Q ss_pred ceeeccCCC-eEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGA-NIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGn-lIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|+ +|++.. .+..|.+|+- ++-+...+.-. .....|..+.|++ +..|+... ....|.+|..
T Consensus 61 ~~~~~~~~~~~l~~~~------~dg~i~~wd~~~~~~~~~~~~~-~~~~~v~~l~~~~-~~~l~s~~---~d~~i~iwd~ 129 (342)
T 1yfq_A 61 CCNFIDNTDLQIYVGT------VQGEILKVDLIGSPSFQALTNN-EANLGICRICKYG-DDKLIAAS---WDGLIEVIDP 129 (342)
T ss_dssp EEEEEESSSEEEEEEE------TTSCEEEECSSSSSSEEECBSC-CCCSCEEEEEEET-TTEEEEEE---TTSEEEEECH
T ss_pred EEEECCCCCcEEEEEc------CCCeEEEEEeccCCceEecccc-CCCCceEEEEeCC-CCEEEEEc---CCCeEEEEcc
Confidence 589999999 888876 3468999986 65554333221 0234699999999 88888764 2458999998
Q ss_pred cc---------ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEE---e---------------eeec
Q 001314 82 SN---------NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIW---T---------------TAVM 133 (1102)
Q Consensus 82 ~N---------YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w---~---------------~~~~ 133 (1102)
.+ .. ..+. +..... .++.|++.. |++++.+|.+.+++..- . +..+
T Consensus 130 ~~~~~~~~~~~~~--~~~~--~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~ 202 (342)
T 1yfq_A 130 RNYGDGVIAVKNL--NSNN--TKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL 202 (342)
T ss_dssp HHHTTBCEEEEES--CSSS--SSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC
T ss_pred cccccccccccCC--eeeE--EeeCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEEC
Confidence 76 22 0011 111223 358998765 77778888888776532 0 0011
Q ss_pred --CCcEEEEE-eCCeEEeccCCCCC---CCCcccccccc--------cCCceeEEEEecCCCCceEEEEEeCCceEEEec
Q 001314 134 --ENSTALVI-DGSKILVTPLSLSL---MPPPMYLFSLK--------FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDL 199 (1102)
Q Consensus 134 --d~~~vaVI-DG~~l~lTp~r~a~---VPPPM~~~~l~--------~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~ 199 (1102)
+...+++. +...+.+-.++... +..+....... -..+|.+++|++++. .|++...++.+.+|++
T Consensus 203 ~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~~~~~dg~i~vwd~ 280 (342)
T 1yfq_A 203 PKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK--FLYTAGSDGIISCWNL 280 (342)
T ss_dssp SGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC--CEEEEETTSCEEEEET
T ss_pred CCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCC--EEEEecCCceEEEEcC
Confidence 22233332 22345554444320 01222111111 123899999998653 5777778899999998
Q ss_pred CC
Q 001314 200 PA 201 (1102)
Q Consensus 200 ~~ 201 (1102)
..
T Consensus 281 ~~ 282 (342)
T 1yfq_A 281 QT 282 (342)
T ss_dssp TT
T ss_pred cc
Confidence 64
No 122
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.14 E-value=0.015 Score=65.39 Aligned_cols=13 Identities=15% Similarity=0.133 Sum_probs=9.8
Q ss_pred cHHHHHHHHHHHH
Q 001314 625 ALEEALERIKIIR 637 (1102)
Q Consensus 625 ~le~aL~~i~~l~ 637 (1102)
++++|..+...+.
T Consensus 27 ~~~~A~~l~~~i~ 39 (383)
T 3ulq_A 27 SIPDAEYLRREIK 39 (383)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 6888888877664
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.14 E-value=0.011 Score=67.28 Aligned_cols=177 Identities=10% Similarity=0.061 Sum_probs=99.9
Q ss_pred ceeecc--------CCCeEEEEeeccCCCCCCeEEEEe-cCCc-ceeeeecCCccccceeeeeecCCCC-eEEEEEeeCC
Q 001314 4 VLEWMP--------SGANIAAVYDRKSENKCPSIVFYE-RNGL-ERSSFDINEQIDSTVELLKWNCMSD-LLAAVVRFEE 72 (1102)
Q Consensus 4 ~LsWrP--------sGnlIA~~qr~~~~~~~~~VvFFE-RNGL-rhgeF~L~~~~~~~v~~L~Wn~DS~-iLAv~~~~~~ 72 (1102)
.++|.| .|++||+.. .+..|.+|+ +.|- ...-+.. ...|..++|++++. +|+..- .
T Consensus 141 ~v~~~p~~~~~~~~d~~~las~s------~D~tv~~Wd~~~~~~~~~~~~~----~~~v~~v~~~p~~~~~l~~~~---~ 207 (393)
T 4gq1_A 141 DIDIADVYSADNRLAEQVIASVG------DDCTLIIWRLTDEGPILAGYPL----SSPGISVQFRPSNPNQLIVGE---R 207 (393)
T ss_dssp EEEEEEEECTTCSEEEEEEEEEE------TTSEEEEEEEETTEEEEEEEEC----SSCEEEEEEETTEEEEEEEEE---T
T ss_pred EEEEccccccccCCCCCEEEEEE------CCCeEEEEECCCCceeeeecCC----CCCcEEEEECCCCCceEEecC---C
Confidence 578988 789999987 467999998 3332 2222222 23688999999874 677653 3
Q ss_pred CCeEEEEEcccceEEEEEEE------------Ee----------ccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEe
Q 001314 73 YDSVKICFFSNNHWYLKYEI------------RY----------LRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWT 129 (1102)
Q Consensus 73 ~~~vqLWt~~NYHWYLKqei------------~~----------~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~ 129 (1102)
...|.+|....-.--....- .. +..+. .++.|.+.+..+|+.++.+|.+.+++..+.
T Consensus 208 d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 208 NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 45899998765432111100 00 00112 247887666666777777777777654321
Q ss_pred ee-----------------------------------ecCCcEEEEEe--CCeEEeccCCCCCCCCcccccccccCCcee
Q 001314 130 TA-----------------------------------VMENSTALVID--GSKILVTPLSLSLMPPPMYLFSLKFPTAVT 172 (1102)
Q Consensus 130 ~~-----------------------------------~~d~~~vaVID--G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~ 172 (1102)
.. ...++..++-- -.+|++-..... -+....+....+|.
T Consensus 288 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~----~~~~~~~~~~~~V~ 363 (393)
T 4gq1_A 288 NDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEK----DSNSIPIQLGMPIV 363 (393)
T ss_dssp ----------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCT----TCCEEEEECSSCEE
T ss_pred CCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCC----cEEEEecCCCCcEE
Confidence 10 00122223321 124555444331 11122234567899
Q ss_pred EEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 173 EMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 173 ~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
+|+|++++. .+| +-+++.+.++++.
T Consensus 364 svafspdG~--~LA-~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 364 DFCWHQDGS--HLA-IATEGSVLLTRLM 388 (393)
T ss_dssp EEEECTTSS--EEE-EEESSEEEEEEEG
T ss_pred EEEEcCCCC--EEE-EEeCCCeEEEEEe
Confidence 999999764 454 4678888888863
No 124
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.13 E-value=0.033 Score=59.48 Aligned_cols=20 Identities=15% Similarity=-0.001 Sum_probs=13.2
Q ss_pred hhHHHhhhcHHHHHHHHHHc
Q 001314 715 YTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~ 734 (1102)
..+...+|+|++|+.++.++
T Consensus 90 ~~~~~~~g~~~~A~~~~~~a 109 (338)
T 3ro2_A 90 GNTLKVLGNFDEAIVCCQRH 109 (338)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHH
Confidence 44555677777777776653
No 125
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=97.11 E-value=0.0081 Score=67.43 Aligned_cols=162 Identities=15% Similarity=0.113 Sum_probs=101.6
Q ss_pred hhHHHhhhcHHHHHHHHHHc---CCCcH---HHHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccCh
Q 001314 715 YTIDLRLQRFENALKHIVSM---GDSYH---ADCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCF 783 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~---g~~~~---deAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~ 783 (1102)
..+...+|+|++|+..|.++ .++.. ...-...... +.|++|++.| .+|.. ...+...|..+...++|
T Consensus 142 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~~~~~ 219 (388)
T 1w3b_A 142 GNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQ-GEIWLAIHHFEKAVTLDPNF-LDAYINLGNVLKEARIF 219 (388)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTTCT
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHcCCH
Confidence 45555678999999888764 22111 1111223344 6677777666 13332 34567788888899999
Q ss_pred HHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc
Q 001314 784 EDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC 854 (1102)
Q Consensus 784 eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl 854 (1102)
++|...|.++-. +.....+|...|+|++|+....+. ...++ .......++..+...|++.+|...|.+-+
T Consensus 220 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~A~~~~~~al 298 (388)
T 1w3b_A 220 DRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPH-FPDAYCNLANALKEKGSVAEAEDCYNTAL 298 (388)
T ss_dssp THHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSS-CHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 999888876621 112335677788888887665442 11111 12467778888888999999988875532
Q ss_pred ----CCH---HHHHHHHHHhcCHHHHHHHHHh
Q 001314 855 ----GDV---TNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 855 ----gD~---e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
.++ ..-..+|.+.++|++|+....+
T Consensus 299 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 330 (388)
T 1w3b_A 299 RLCPTHADSLNNLANIKREQGNIEEAVRLYRK 330 (388)
T ss_dssp HHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred hhCcccHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 122 2345677888888888876654
No 126
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.10 E-value=0.023 Score=63.69 Aligned_cols=173 Identities=9% Similarity=0.048 Sum_probs=103.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecC--CCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNC--MSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~--DS~iLAv~~~~~~~~~vqLWt 80 (1102)
.++|.|.|+.|++.. .+..|.+|+ ++|-....|.-. ...|..+.|++ ++..|+..- ....|.+|+
T Consensus 159 ~~~~~~~~~~l~t~s------~D~~v~lwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~g~~l~sgs---~Dg~v~~wd 226 (354)
T 2pbi_B 159 ACSFTNSDMQILTAS------GDGTCALWDVESGQLLQSFHGH---GADVLCLDLAPSETGNTFVSGG---CDKKAMVWD 226 (354)
T ss_dssp EEEECSSSSEEEEEE------TTSEEEEEETTTCCEEEEEECC---SSCEEEEEECCCSSCCEEEEEE---TTSCEEEEE
T ss_pred EEEEeCCCCEEEEEe------CCCcEEEEeCCCCeEEEEEcCC---CCCeEEEEEEeCCCCCEEEEEe---CCCeEEEEE
Confidence 578999999888876 356899998 445444444321 22466666655 678888764 234799999
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-------E----------eeeec-CCcEEEEE
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-------W----------TTAVM-ENSTALVI 141 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-------w----------~~~~~-d~~~vaVI 141 (1102)
..+-.. .+.+. +.... .++.|+|...+ |+.++.+|.+.+++.. + .+..+ +...+++-
T Consensus 227 ~~~~~~--~~~~~-~h~~~v~~v~~~p~~~~-l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g 302 (354)
T 2pbi_B 227 MRSGQC--VQAFE-THESDVNSVRYYPSGDA-FASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAG 302 (354)
T ss_dssp TTTCCE--EEEEC-CCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCcE--EEEec-CCCCCeEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEE
Confidence 887652 22221 11223 35899998765 7777888888876632 1 01111 22233332
Q ss_pred -eCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEe
Q 001314 142 -DGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVD 198 (1102)
Q Consensus 142 -DG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~ 198 (1102)
+..+|.+-.++... ++... ..-..+|.+++|++++. .++.--.|+++.+|.
T Consensus 303 ~~d~~i~vwd~~~~~---~~~~l-~~h~~~v~~l~~spdg~--~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 303 YNDYTINVWDVLKGS---RVSIL-FGHENRVSTLRVSPDGT--AFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTSCEEEEETTTCS---EEEEE-CCCSSCEEEEEECTTSS--CEEEEETTSEEEEEC
T ss_pred ECCCcEEEEECCCCc---eEEEE-ECCCCcEEEEEECCCCC--EEEEEcCCCCEEecC
Confidence 22345655554321 11111 12356799999998754 566667788888873
No 127
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.06 E-value=0.059 Score=61.36 Aligned_cols=111 Identities=16% Similarity=0.105 Sum_probs=69.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec----CCccee--------eeecCCc-cccceeeee--ecCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER----NGLERS--------SFDINEQ-IDSTVELLK--WNCMSDLLAAVV 68 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER----NGLrhg--------eF~L~~~-~~~~v~~L~--Wn~DS~iLAv~~ 68 (1102)
+++|.|.|++||+.. .+..|.+|+- .|-... .+.+... ....+..+. |++|+..|+...
T Consensus 116 ~~~~~~~~~~l~s~s------~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (437)
T 3gre_A 116 QITMIPNFDAFAVSS------KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT 189 (437)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE
T ss_pred EEEEeCCCCEEEEEe------CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe
Confidence 589999999999876 3568888864 332211 1111100 122344444 788999999875
Q ss_pred eeCCCCeEEEEEcccceEEEEEEEEec-cCCC-ceEEecCCCCceEEEEeeCCcEEEEEE
Q 001314 69 RFEEYDSVKICFFSNNHWYLKYEIRYL-RRDG-IRFMWHPTKPLQLICWTLDGQITTYNF 126 (1102)
Q Consensus 69 ~~~~~~~vqLWt~~NYHWYLKqei~~~-~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~ 126 (1102)
....|.+|...+..- .+.+... .... .++.|+|...+ |+.++.+|.+.+++.
T Consensus 190 ---~d~~i~iwd~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~ 243 (437)
T 3gre_A 190 ---NLSRVIIFDIRTLER--LQIIENSPRHGAVSSICIDEECCV-LILGTTRGIIDIWDI 243 (437)
T ss_dssp ---TTSEEEEEETTTCCE--EEEEECCGGGCCEEEEEECTTSCE-EEEEETTSCEEEEET
T ss_pred ---CCCeEEEEeCCCCee--eEEEccCCCCCceEEEEECCCCCE-EEEEcCCCeEEEEEc
Confidence 245899999987652 3333321 1233 46899998555 787788888877663
No 128
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=97.06 E-value=0.0052 Score=70.07 Aligned_cols=163 Identities=15% Similarity=0.027 Sum_probs=102.1
Q ss_pred chhHHHhhhcHHHHHHHHHHc---CCCcH---HH----------------HHHHHHHHhcchHHHHhcc-----CCcHhH
Q 001314 714 RYTIDLRLQRFENALKHIVSM---GDSYH---AD----------------CLNLMKKYAQLFPLGLKLI-----TDPAKM 766 (1102)
Q Consensus 714 r~~Id~~LkryekAl~hl~~~---g~~~~---de----------------Aie~~~~~~~Ly~~AL~L~-----~d~~~~ 766 (1102)
...+...+|+|++|+..|.++ .+... +. +.. ..+. +.|++|++++ .+|. .
T Consensus 100 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~-~~~~-~~~~~A~~~~~~~~~~~~~-~ 176 (450)
T 2y4t_A 100 RGHLLLKQGKLDEAEDDFKKVLKSNPSENEEKEAQSQLIKSDEMQRLRSQALN-AFGS-GDYTAAIAFLDKILEVCVW-D 176 (450)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-TCHHHHHHHHHHHHHHCTT-C
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCCCChhhHHHHHHHHHHHHHHHHHHHHHH-HHHc-CCHHHHHHHHHHHHHhCCC-C
Confidence 355666789999999988876 22211 11 222 3455 7888888887 1332 2
Q ss_pred HHHHHHHHHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc---CCChHHHHHHH-----
Q 001314 767 EQVLEAWADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL---KLGKDEVAKLA----- 830 (1102)
Q Consensus 767 ~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l---~~~~~el~~l~----- 830 (1102)
..++...|..+...+++++|...|.++-. +-....+|...|++++|+....+. .-+........
T Consensus 177 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~~~~~~~~ 256 (450)
T 2y4t_A 177 AELRELRAECFIKEGEPRKAISDLKAASKLKNDNTEAFYKISTLYYQLGDHELSLSEVRECLKLDQDHKRCFAHYKQVKK 256 (450)
T ss_dssp HHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCChHHHHHHHHHHHH
Confidence 35667788888889999999998887622 223346677888888887665432 11111111111
Q ss_pred ----HHHHHHHHHcCChHHHHHHHHHhc----CCH-------HHHHHHHHHhcCHHHHHHHHHh
Q 001314 831 ----QELCEELQALGKPGEAAKIALDYC----GDV-------TNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 831 ----~~lA~~L~~~g~~~eAa~i~l~yl----gD~-------e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
..++..+...|++.+|..+|.+.+ +++ .....+|.+.++|++|+....+
T Consensus 257 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 320 (450)
T 2y4t_A 257 LNKLIESAEELIRDGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSE 320 (450)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 233778888889998888875532 222 1235677788888888876554
No 129
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=97.05 E-value=0.023 Score=67.44 Aligned_cols=156 Identities=8% Similarity=-0.134 Sum_probs=75.4
Q ss_pred hhcHHHHHHHHHHcCC--Cc---HHHHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccChHHHHHHH
Q 001314 721 LQRFENALKHIVSMGD--SY---HADCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCFEDAATTY 790 (1102)
Q Consensus 721 LkryekAl~hl~~~g~--~~---~deAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y 790 (1102)
.|++++|++.|.++-. .. .........+. +.|++|++++ .+|. ...++..++.-+...+++++|..+|
T Consensus 285 ~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~ 362 (597)
T 2xpi_A 285 EDELRRAEDYLSSINGLEKSSDLLLCKADTLFVR-SRFIDVLAITTKILEIDPY-NLDVYPLHLASLHESGEKNKLYLIS 362 (597)
T ss_dssp HHHHHHHHHHHHTSTTGGGCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTT-CCTTHHHHHHHHHHHTCHHHHHHHH
T ss_pred cchHHHHHHHHHHhhcCCchHHHHHHHHHHHHHh-cCHHHHHHHHHHHHHcCcc-cHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 4555666665555422 11 11222223343 5555555555 1221 1123334444555556666666665
Q ss_pred HHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcC----C-
Q 001314 791 FCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCG----D- 856 (1102)
Q Consensus 791 ~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylg----D- 856 (1102)
.++-. +-....+|.+.|++++|+.+..+. ...+. .......++..+...|++.+|..+|.+.+. +
T Consensus 363 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 441 (597)
T 2xpi_A 363 NDLVDRHPEKAVTWLAVGIYYLCVNKISEARRYFSKSSTMDPQ-FGPAWIGFAHSFAIEGEHDQAISAYTTAARLFQGTH 441 (597)
T ss_dssp HHHHHHCTTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTTTCS
T ss_pred HHHHhhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccch
Confidence 54310 112235555666666665544321 01111 123455667777777777777777654321 1
Q ss_pred --HHHHHHHHHHhcCHHHHHHHHHh
Q 001314 857 --VTNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 857 --~e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
.-.-+.+|++.+++++|+.+..+
T Consensus 442 ~~~~~l~~~~~~~g~~~~A~~~~~~ 466 (597)
T 2xpi_A 442 LPYLFLGMQHMQLGNILLANEYLQS 466 (597)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 12345667777777777765443
No 130
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.0045 Score=74.32 Aligned_cols=175 Identities=11% Similarity=0.058 Sum_probs=99.8
Q ss_pred eeccCC-CeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 6 EWMPSG-ANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 6 sWrPsG-nlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
+|.|.| ++||+.. .+..|.+|+- +|-.-..|.-.. ....|..++|++|+..||.- ...+.|.||...+
T Consensus 317 ~~s~~g~~~laS~S------~D~tvklWD~~~~~~~~~~~~~~-~~~~v~~v~fsp~~~~l~s~---~~d~tv~lwd~~~ 386 (524)
T 2j04_B 317 AYSDFEDTVVSTVA------VDGYFYIFNPKDIATTKTTVSRF-RGSNLVPVVYCPQIYSYIYS---DGASSLRAVPSRA 386 (524)
T ss_dssp ECCTTSCCEEEEEE------TTSEEEEECGGGHHHHCEEEEEC-SCCSCCCEEEETTTTEEEEE---CSSSEEEEEETTC
T ss_pred EcCCCCCeEEEEec------cCCeEEEEECCCCCccccccccc-ccCcccceEeCCCcCeEEEe---CCCCcEEEEECcc
Confidence 578888 8999986 3679999983 332211111111 11247889999999987764 3345799999877
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEE-------------------EEEeeeec-CCcEEEEEe
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYN-------------------FIWTTAVM-ENSTALVID 142 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~-------------------~~w~~~~~-d~~~vaVID 142 (1102)
.. +.+.+. +.... .++.|+|..++ |+.++.+|.+.+++ +.|.++.+ +.+++..-|
T Consensus 387 ~~--~~~~l~-gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~ 462 (524)
T 2j04_B 387 AF--AVHPLV-SRETTITAIGVSRLHPM-VLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDS 462 (524)
T ss_dssp TT--CCEEEE-ECSSCEEEEECCSSCCB-CEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECC
T ss_pred cc--cceeee-cCCCceEEEEeCCCCCe-EEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccC
Confidence 54 112222 22334 46899998887 77777788776532 23555544 333343323
Q ss_pred CCeEEeccCCCCCCCCcccccccc-cCCceeEEEEecCCC-CceEEEEEeCCceEEEecC
Q 001314 143 GSKILVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSS-KNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 143 G~~l~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~-~~~~a~vl~~~~l~l~~~~ 200 (1102)
+-.+. ... +...+...+. -..+|.+|+|+++.. ...+|.-..+|.+.||++.
T Consensus 463 ~~~~~--~~~----~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~ 516 (524)
T 2j04_B 463 SYEVY--PLT----VNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLS 516 (524)
T ss_dssp CCCCC--C-----------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECS
T ss_pred Cceec--ccc----cCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEcc
Confidence 21111 010 0011111221 235799999999754 2356666677999999874
No 131
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.04 E-value=0.045 Score=60.63 Aligned_cols=177 Identities=10% Similarity=0.068 Sum_probs=103.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc----------eeeeecCCccccceeeeeecC--CCCeEEEEEeeC
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE----------RSSFDINEQIDSTVELLKWNC--MSDLLAAVVRFE 71 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr----------hgeF~L~~~~~~~v~~L~Wn~--DS~iLAv~~~~~ 71 (1102)
.+.|.|+ +++.. .+..|.+|.-+|.. -..+.++ ....|..+.|++ +++.|+..-
T Consensus 81 ~~~~~~~---~~s~s------~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s--- 146 (343)
T 3lrv_A 81 TGGEHPA---IISRG------PCNRLLLLYPGNQITILDSKTNKVLREIEVD--SANEIIYMYGHNEVNTEYFIWAD--- 146 (343)
T ss_dssp TTCCCCS---EEEEC------STTEEEEEETTTEEEEEETTTCCEEEEEECC--CSSCEEEEECCC---CCEEEEEE---
T ss_pred eeeeCCc---eEEec------CCCeEEEEEccCceEEeecCCcceeEEeecC--CCCCEEEEEcCCCCCCCEEEEEe---
Confidence 4567777 44433 25678888766532 1122222 123699999999 999998764
Q ss_pred CCCeEEEEEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE--------Eee---------eec
Q 001314 72 EYDSVKICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI--------WTT---------AVM 133 (1102)
Q Consensus 72 ~~~~vqLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~--------w~~---------~~~ 133 (1102)
....|.+|+..+..-+ +......... .++.|+|...+ |+.++.+|.+.+++.. +.. ..+
T Consensus 147 ~dg~i~~wd~~~~~~~--~~~~~~~~~~i~~~~~~pdg~~-lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQY--IVHSAKSDVEYSSGVLHKDSLL-LALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp TTCCEEEEESSSSCEE--EEECCCSSCCCCEEEECTTSCE-EEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEEC
T ss_pred CCCcEEEEECCCCcEE--EEEecCCCCceEEEEECCCCCE-EEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEe
Confidence 2347999999887631 1111112223 46899997765 8888888998887642 222 122
Q ss_pred -CCcEEEEEeCCeEEeccCCCCCCCCcccc---cccccCCceeEEEEecCCCCceEEEEEe-CCceEEEecCC
Q 001314 134 -ENSTALVIDGSKILVTPLSLSLMPPPMYL---FSLKFPTAVTEMAFYSKSSKNCLAAILS-DGCLCVVDLPA 201 (1102)
Q Consensus 134 -d~~~vaVIDG~~l~lTp~r~a~VPPPM~~---~~l~~~~~i~~vaf~~~~~~~~~a~vl~-~~~l~l~~~~~ 201 (1102)
+...+++-..++|++-.++....+-.+.. ..+.... .+++|++++. .+++... ++.+.+|++..
T Consensus 224 ~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~--~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 224 DNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGT--VTYDIDDSGK--NMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp TTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CC--EEEEECTTSS--EEEEEETTTTEEEEEEECT
T ss_pred CCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccc--eEEEECCCCC--EEEEecCCCCcEEEEEEcc
Confidence 23344443333899999888533222221 1122222 4689988653 4554456 89999999853
No 132
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.00 E-value=0.042 Score=61.07 Aligned_cols=21 Identities=14% Similarity=-0.035 Sum_probs=13.7
Q ss_pred chhHHHhhhcHHHHHHHHHHc
Q 001314 714 RYTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 714 r~~Id~~LkryekAl~hl~~~ 734 (1102)
...+...+|+|++|+.++.++
T Consensus 93 la~~~~~~g~~~~A~~~~~~a 113 (406)
T 3sf4_A 93 LGNTLKVLGNFDEAIVCCQRH 113 (406)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 345555677777777776654
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.97 E-value=0.029 Score=60.85 Aligned_cols=115 Identities=11% Similarity=0.108 Sum_probs=70.6
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
..++|.|.|++|+++.. ....|.+|.- +|-. ++..-..+....+..++|++||..|++.. ...+.|.+|..
T Consensus 87 ~~~~~s~dg~~l~~~~~-----~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~--~~~~~v~~~d~ 158 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSY-----NAGNVSVTRLEDGLP-VGVVDVVEGLDGCHSANISPDNRTLWVPA--LKQDRICLFTV 158 (343)
T ss_dssp SEEEECTTSSEEEEEET-----TTTEEEEEEEETTEE-EEEEEEECCCTTBCCCEECTTSSEEEEEE--GGGTEEEEEEE
T ss_pred cEEEEcCCCCEEEEEec-----CCCeEEEEECCCCcc-ccccccccCCCCceEEEECCCCCEEEEec--CCCCEEEEEEe
Confidence 35789999998877653 2456888876 3321 11111111223588899999999887754 23568999998
Q ss_pred cc-ceEEEEE--EEEeccCCC-ceEEecCCCCceEEEEe-eCCcEEEEEE
Q 001314 82 SN-NHWYLKY--EIRYLRRDG-IRFMWHPTKPLQLICWT-LDGQITTYNF 126 (1102)
Q Consensus 82 ~N-YHWYLKq--ei~~~~~~~-~~~~W~~e~pl~L~i~t-~~g~~~~~~~ 126 (1102)
.. -.+-... .+....... ..+.|+|.... |++.. .+|.+.++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~-l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 159 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY-AYCVNELNSSVDVWEL 207 (343)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE-EEEEETTTTEEEEEES
T ss_pred cCCCceeeecccccccCCCCCcceEEECCCCCE-EEEEeCCCCEEEEEEe
Confidence 76 5543333 333333323 35899998775 54433 4566766664
No 134
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.97 E-value=0.81 Score=52.26 Aligned_cols=195 Identities=13% Similarity=0.036 Sum_probs=102.2
Q ss_pred eeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcccc
Q 001314 6 EWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNN 84 (1102)
Q Consensus 6 sWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~NY 84 (1102)
++.++|++||+.. .+..|.+|+ ++|-....| ++ ....|..++|++|+ .|+... ....|.+|...+.
T Consensus 127 ~~~~~~~~l~sgs------~dg~i~vwd~~~~~~~~~~--~~-h~~~V~~l~~~~~~-~l~s~s---~dg~i~vwd~~~~ 193 (464)
T 3v7d_B 127 CLQFEDNYVITGA------DDKMIRVYDSINKKFLLQL--SG-HDGGVWALKYAHGG-ILVSGS---TDRTVRVWDIKKG 193 (464)
T ss_dssp EEEEETTEEEEEE------TTSCEEEEETTTTEEEEEE--CC-CSSCEEEEEECSTT-EEEEEE---TTSCEEEEETTTT
T ss_pred EEEECCCEEEEEc------CCCcEEEEECCCCcEEEEE--eC-CCcCEEEEEEcCCC-EEEEEe---CCCCEEEEECCCC
Confidence 5667889999876 356899998 455443333 32 23469999999998 555543 2457999999876
Q ss_pred eEEEEEEEEeccCCCc-eEEecCCC-CceEEEEeeCCcEEEEEEEEeeeecCCcEEEEE--eCCeEEeccCCCCCCCCcc
Q 001314 85 HWYLKYEIRYLRRDGI-RFMWHPTK-PLQLICWTLDGQITTYNFIWTTAVMENSTALVI--DGSKILVTPLSLSLMPPPM 160 (1102)
Q Consensus 85 HWYLKqei~~~~~~~~-~~~W~~e~-pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVI--DG~~l~lTp~r~a~VPPPM 160 (1102)
. ..+.+. +....+ ++.|++.. ...|+.++.+|.+.+ |++........... +...+..+|- ..|.
T Consensus 194 ~--~~~~~~-~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v----wd~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 261 (464)
T 3v7d_B 194 C--CTHVFE-GHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV----WKLPKESSVPDHGEEHDYPLVFHTPE-----ENPY 261 (464)
T ss_dssp E--EEEEEC-CCSSCEEEEEEEESSSCEEEEEEETTSCEEE----EECCCCCCC------CCSSEEESCGG-----GCTT
T ss_pred c--EEEEEC-CCCCccEEEEEecCCCCCEEEEEcCCCcEEE----eeCCCCcccccccccCCcceEeeccC-----CCeE
Confidence 5 122222 122333 57787532 244777777788776 44331100000000 0011111111 1111
Q ss_pred ccccc-ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccCceEEEEEecCceEE
Q 001314 161 YLFSL-KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHLIWLGSHLLL 239 (1102)
Q Consensus 161 ~~~~l-~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ll 239 (1102)
....+ .-..+|.+++ ++ .+.+++...++++.+|++........+ ....+.+..++|..++..+
T Consensus 262 ~~~~~~~~~~~v~~~~--~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~------------~~~~~~v~~~~~~~~~~~l 325 (464)
T 3v7d_B 262 FVGVLRGHMASVRTVS--GH--GNIVVSGSYDNTLIVWDVAQMKCLYIL------------SGHTDRIYSTIYDHERKRC 325 (464)
T ss_dssp EEEEECCCSSCEEEEE--EE--TTEEEEEETTSCEEEEETTTTEEEEEE------------CCCSSCEEEEEEETTTTEE
T ss_pred EEEEccCccceEEEEc--CC--CCEEEEEeCCCeEEEEECCCCcEEEEe------------cCCCCCEEEEEEcCCCCEE
Confidence 11111 1223444443 32 246777788999999998543221111 1123457777887776555
Q ss_pred EE
Q 001314 240 SV 241 (1102)
Q Consensus 240 ~~ 241 (1102)
++
T Consensus 326 ~s 327 (464)
T 3v7d_B 326 IS 327 (464)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 135
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=96.95 E-value=0.018 Score=62.70 Aligned_cols=139 Identities=14% Similarity=0.050 Sum_probs=76.1
Q ss_pred hhchhHHHhhhcHHHHHHHHHHc---CCCcH---HHHHHHHHHHhcchHHHHhcc-----CCcH--hHHHHHHHH-----
Q 001314 712 LMRYTIDLRLQRFENALKHIVSM---GDSYH---ADCLNLMKKYAQLFPLGLKLI-----TDPA--KMEQVLEAW----- 773 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~---g~~~~---deAie~~~~~~~Ly~~AL~L~-----~d~~--~~~~i~~~y----- 773 (1102)
.....+...+|+|++|+..|.++ .++.. -..-.+.... +.|++|++.+ .+|. ....++..+
T Consensus 41 ~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 119 (359)
T 3ieg_A 41 YRRATVFLAMGKSKAALPDLTKVIALKMDFTAARLQRGHLLLKQ-GKLDEAEDDFKKVLKSNPSEQEEKEAESQLVKADE 119 (359)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-TCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHc-CChHHHHHHHHHHHhcCCcccChHHHHHHHHHHHH
Confidence 34456677789999999988764 33221 1112223455 7888888887 2451 222333333
Q ss_pred -------HHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHH
Q 001314 774 -------ADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEEL 837 (1102)
Q Consensus 774 -------Ad~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L 837 (1102)
|..+...+++++|..+|.++-. +.....+|...|+|++|+....+. ...+. .......+|..+
T Consensus 120 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~ 198 (359)
T 3ieg_A 120 MQRLRSQALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLKAASKLKSD-NTEAFYKISTLY 198 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 5666666666666666665421 112334556666666666554332 11111 123455566666
Q ss_pred HHcCChHHHHHHHHH
Q 001314 838 QALGKPGEAAKIALD 852 (1102)
Q Consensus 838 ~~~g~~~eAa~i~l~ 852 (1102)
...|++.+|...+.+
T Consensus 199 ~~~~~~~~A~~~~~~ 213 (359)
T 3ieg_A 199 YQLGDHELSLSEVRE 213 (359)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHH
Confidence 666666666665533
No 136
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=96.93 E-value=0.014 Score=64.18 Aligned_cols=59 Identities=22% Similarity=0.073 Sum_probs=33.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.+.+|.. |++++|+++|.+ |+.+....+ ........+..+|..+...|+|.+|...|.+
T Consensus 122 lg~~~~~-g~~~~A~~~~~~------Al~~~~~~~-~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 180 (307)
T 2ifu_A 122 AGKLMEP-LDLSKAVHLYQQ------AAAVFENEE-RLRQAAELIGKASRLLVRQQKFDEAAASLQK 180 (307)
T ss_dssp HHHHHTT-TCHHHHHHHHHH------HHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHc-CCHHHHHHHHHH------HHHHHHhCC-ChhHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3444444 555555555443 333333322 1222345677788888888888888877644
No 137
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=96.92 E-value=0.016 Score=62.45 Aligned_cols=161 Identities=12% Similarity=0.008 Sum_probs=103.5
Q ss_pred hhHHHhhhcHHHHHHHHHHc---CCCc----HHHHHHHHHHHhc-chHHHHhcc-----CCcHhHHHHHHHHHHHHhccc
Q 001314 715 YTIDLRLQRFENALKHIVSM---GDSY----HADCLNLMKKYAQ-LFPLGLKLI-----TDPAKMEQVLEAWADHLSDVK 781 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~---g~~~----~deAie~~~~~~~-Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~ 781 (1102)
..+...+|++++|+..+.++ .+.. ...+.-+ ... + .|++|++.+ .+|. ...++..+|..+...+
T Consensus 63 ~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~-~~~-~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~ 139 (330)
T 3hym_B 63 IGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYY-LMV-GHKNEHARRYLSKATTLEKT-YGPAWIAYGHSFAVES 139 (330)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHH-HHS-CSCHHHHHHHHHHHHTTCTT-CTHHHHHHHHHHHHHT
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHH-HHh-hhhHHHHHHHHHHHHHhCCc-cHHHHHHHHHHHHHcc
Confidence 34555688999999888764 2211 2233222 333 4 788888777 2332 2345677888888999
Q ss_pred ChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 782 CFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 782 ~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
++++|..+|.++-. +-....+|...|++++|+....+. ...++. ......+|..+...|++.+|...+.+
T Consensus 140 ~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~~~~ 218 (330)
T 3hym_B 140 EHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED-PFVMHEVGVVAFQNGEWKTAEKWFLD 218 (330)
T ss_dssp CHHHHHHHHHHHHHHTTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 99999998887632 122346677888888887766542 222222 35677788888899999999888755
Q ss_pred hcCC----------------HHHHHHHHHHhcCHHHHHHHHHh
Q 001314 853 YCGD----------------VTNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 853 ylgD----------------~e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
.+.- .-....+|.+.++|++|+....+
T Consensus 219 a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 261 (330)
T 3hym_B 219 ALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQ 261 (330)
T ss_dssp HHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3221 12345567778888888765443
No 138
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.92 E-value=0.039 Score=63.07 Aligned_cols=156 Identities=15% Similarity=0.203 Sum_probs=92.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecC--CccccceeeeeecCCC-CeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDIN--EQIDSTVELLKWNCMS-DLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~--~~~~~~v~~L~Wn~DS-~iLAv~~~~~~~~~vqLWt 80 (1102)
.+.|.|.|+++|+.. .+..|.+|+-..-+.....+. ......|..++|++++ .+||+.. ......|.+|.
T Consensus 235 ~~~~~~~g~~l~s~~------~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~-gs~D~~I~iwd 307 (420)
T 4gga_A 235 GLRWAPDGRHLASGG------NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG-GTSDRHIRIWN 307 (420)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEE-CTTTCEEEEEE
T ss_pred eeeecCCCCeeeeee------ccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEe-ecCCCEEEEEe
Confidence 478999999999976 345677776433222221111 1123469999999965 5555543 22234799999
Q ss_pred cccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEe--eCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCC
Q 001314 81 FSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWT--LDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMP 157 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t--~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VP 157 (1102)
+.+..- ...+. .... .++.|++.... |++++ .+|.+.+ |++. ....+..+.|
T Consensus 308 ~~t~~~--~~~~~--~~~~v~~~~~~~~~~~-lv~~sg~~d~~I~i----wd~~--~~~~v~~l~g-------------- 362 (420)
T 4gga_A 308 VCSGAC--LSAVD--AHSQVCSILWSPHYKE-LISGHGFAQNQLVI----WKYP--TMAKVAELKG-------------- 362 (420)
T ss_dssp TTTTEE--EEEEE--CSSCEEEEEEETTTTE-EEEEECTTTCCEEE----EETT--TCCEEEEECC--------------
T ss_pred CCcccc--ceeec--cccceeeeeecCCCCe-EEEEEecCCCEEEE----EECC--CCcEEEEEcC--------------
Confidence 988762 22222 2223 45788887665 44433 3455554 3221 1112222211
Q ss_pred CcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 158 PPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 158 PPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
-..+|.+|+|++++. .|+..-.|++|.||++.+.
T Consensus 363 ---------H~~~V~~l~~spdg~--~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 363 ---------HTSRVLSLTMSPDGA--TVASAAADETLRLWRCFEL 396 (420)
T ss_dssp ---------CSSCEEEEEECTTSS--CEEEEETTTEEEEECCSCS
T ss_pred ---------CCCCEEEEEEcCCCC--EEEEEecCCeEEEEECCCC
Confidence 135799999998754 5666678999999998543
No 139
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.91 E-value=0.016 Score=66.82 Aligned_cols=109 Identities=11% Similarity=0.072 Sum_probs=73.9
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
+|+|.| .|++|++.. .+..|.+|+-.|-....|.-.......+..++|++|+.+||... ....|.+|+..
T Consensus 169 ~l~f~p~~~~~l~s~s------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~---~dg~i~~wd~~ 239 (435)
T 4e54_B 169 GLKFNPLNTNQFYASS------MEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD---NVGNVILLNMD 239 (435)
T ss_dssp EEEECSSCTTEEEEEC------SSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC---SSSBEEEEESS
T ss_pred EEEEeCCCCCEEEEEe------CCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe---CCCcEeeeccC
Confidence 689999 689999876 35689999866543333332222334578899999999999864 34579999986
Q ss_pred cceEEEEEEEEecc-CCC-ceEEecCCCCceEEEEeeCCcEEEEEE
Q 001314 83 NNHWYLKYEIRYLR-RDG-IRFMWHPTKPLQLICWTLDGQITTYNF 126 (1102)
Q Consensus 83 NYHWYLKqei~~~~-~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~ 126 (1102)
... ...+.. ... .++.|+|..+..|+.+..+|.+.+++.
T Consensus 240 ~~~-----~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~ 280 (435)
T 4e54_B 240 GKE-----LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDL 280 (435)
T ss_dssp SCB-----CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEET
T ss_pred cce-----eEEEecccceEEeeeecCCCceEEEEecCcceeeEEec
Confidence 522 111222 223 358999998876777777788776553
No 140
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.88 E-value=0.0019 Score=75.62 Aligned_cols=138 Identities=12% Similarity=0.035 Sum_probs=89.3
Q ss_pred hhcHHHHHHHHHHcCCCcHHHHHHHHHHHhcchHHHHhccCCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCH---H
Q 001314 721 LQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSL---E 797 (1102)
Q Consensus 721 LkryekAl~hl~~~g~~~~deAie~~~~~~~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~---e 797 (1102)
+|+++++.+.+..-+...+...-+..-+. ++|+.|..+|... .-+...|+=|...++|++|...|.+|++. .
T Consensus 107 lg~l~e~e~f~~~pn~~a~~~IGd~~~~~-g~yeeA~~~Y~~a----~n~~~LA~~L~~Lg~yq~AVea~~KA~~~~~Wk 181 (449)
T 1b89_A 107 TNRLAELEEFINGPNNAHIQQVGDRCYDE-KMYDAAKLLYNNV----SNFGRLASTLVHLGEYQAAVDGARKANSTRTWK 181 (449)
T ss_dssp --CHHHHTTTTTCC-----------------CTTTHHHHHHHT----TCHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHH
T ss_pred hCCHHHHHHHHcCCcHHHHHHHHHHHHHc-CCHHHHHHHHHHh----hhHHHHHHHHHHhccHHHHHHHHHHcCCchhHH
Confidence 56666666555432212233344445566 8899998888311 25666889999999999999999999998 7
Q ss_pred HHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcCCHHHHHHHHHHh
Q 001314 798 KAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDA 867 (1102)
Q Consensus 798 kAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylgD~e~AI~~y~~~ 867 (1102)
.++.+++..|+|+.|..+...+...+++ +.++++.+++.|++.+|..++..-+|.-+.-+.++-..
T Consensus 182 ~v~~aCv~~~ef~lA~~~~l~L~~~ad~----l~~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel 247 (449)
T 1b89_A 182 EVCFACVDGKEFRLAQMCGLHIVVHADE----LEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL 247 (449)
T ss_dssp HHHHHHHHTTCHHHHHHTTTTTTTCHHH----HHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHhCHhh----HHHHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHH
Confidence 8889999999999998877776656654 33577788888999999888766555444445554443
No 141
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=96.88 E-value=0.012 Score=61.74 Aligned_cols=26 Identities=8% Similarity=-0.291 Sum_probs=14.4
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
.++...|..+...+++++|..+|.++
T Consensus 112 ~~~~~la~~~~~~g~~~~A~~~~~~a 137 (275)
T 1xnf_A 112 YAHLNRGIALYYGGRDKLAQDDLLAF 137 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34445555555566666666655554
No 142
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=96.87 E-value=0.016 Score=64.92 Aligned_cols=162 Identities=15% Similarity=0.061 Sum_probs=105.9
Q ss_pred hhHHHhhhcHHHHHHHHHHc---CCCcHHHH---HHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccCh
Q 001314 715 YTIDLRLQRFENALKHIVSM---GDSYHADC---LNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCF 783 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~---g~~~~deA---ie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~ 783 (1102)
..+....|++++|+.+|.++ +++..+-. -...... +.|++|++.+ .+|.. ..++...|.-+...+++
T Consensus 176 ~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~g~~ 253 (388)
T 1w3b_A 176 GCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEA-RIFDRAVAAYLRALSLSPNH-AVVHGNLACVYYEQGLI 253 (388)
T ss_dssp HHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT-TCTTHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCcCC-HHHHHHHHHHHHHcCCH
Confidence 45566788999999988765 33222111 1123344 6777777766 13322 34566788888999999
Q ss_pred HHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc
Q 001314 784 EDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC 854 (1102)
Q Consensus 784 eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl 854 (1102)
++|...|.++-. +..-..+|...|++++|+....+. ...++. ......++..+...|++.+|...|.+.+
T Consensus 254 ~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~g~~~~A~~~~~~al 332 (388)
T 1w3b_A 254 DLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTH-ADSLNNLANIKREQGNIEEAVRLYRKAL 332 (388)
T ss_dssp HHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc-HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 999999988621 223345677888998887765442 111111 2467778889999999999999986644
Q ss_pred CC-H------HHHHHHHHHhcCHHHHHHHHHh
Q 001314 855 GD-V------TNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 855 gD-~------e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
.. + ..-..+|.+.++|++|+....+
T Consensus 333 ~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 364 (388)
T 1w3b_A 333 EVFPEFAAAHSNLASVLQQQGKLQEALMHYKE 364 (388)
T ss_dssp TSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred hcCCCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 32 1 2345677888999999876543
No 143
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=96.86 E-value=0.027 Score=58.87 Aligned_cols=27 Identities=26% Similarity=0.238 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 826 VAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 826 l~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.......+|..+...|++.+|...+.+
T Consensus 168 ~~~~~~~la~~~~~~g~~~~A~~~~~~ 194 (283)
T 3edt_B 168 VAKTKNNLASCYLKQGKYQDAETLYKE 194 (283)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 345666777777777777777776644
No 144
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.85 E-value=0.088 Score=58.91 Aligned_cols=204 Identities=12% Similarity=0.086 Sum_probs=111.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
+++|.|.|+++|+.. ...+.+|.-+....- +.... ..+..+.|..+++.||+.. .....|.+|....
T Consensus 24 ~v~fs~dg~~la~g~-------~~~~~iw~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~--~~d~~v~iWd~~~ 90 (355)
T 3vu4_A 24 DYEFNQDQSCLILST-------LKSFEIYNVHPVAHI-MSQEM---RHLSKVRMLHRTNYVAFVT--GVKEVVHIWDDVK 90 (355)
T ss_dssp EEEECTTSSEEEEEC-------SSEEEEEEETTEEEE-EEEEC---SCCCEEEECTTSSEEEEEC--SSTTEEEEEETTT
T ss_pred EEEECCCCCEEEEEc-------CCEEEEEecCCccee-eeeec---CCeEEEEEcCCCCEEEEEE--CCccEEEEEECCC
Confidence 689999999999875 224677875533211 11111 1366788999999998875 2234899999887
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEEe-------------eeecCCcEEEEE---eCCeE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIWT-------------TAVMENSTALVI---DGSKI 146 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~-------------~~~~d~~~vaVI---DG~~l 146 (1102)
..- .+++.+. .. .++.|++.. +.+ ..++.+.++++.-. .+.+. ..+++. +..+|
T Consensus 91 ~~~--~~~~~~~--~~v~~v~~~~~~---~~~-~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~-~~la~~sg~~~g~v 161 (355)
T 3vu4_A 91 KQD--VSRIKVD--APVKDLFLSREF---IVV-SYGDVISVFKFGNPWKRITDDIRFGGVCEFSN-GLLVYSNEFNLGQI 161 (355)
T ss_dssp TEE--EEEEECS--SCEEEEEECSSE---EEE-EETTEEEEEESSTTCCBSSCCEEEEEEEEEET-TEEEEEESSCTTCE
T ss_pred CcE--EEEEECC--CceEEEEEcCCE---EEE-EEcCEEEEEECCCCceeeEEeccCCceEEEEc-cEEEEeCCCcCcEE
Confidence 652 3344432 23 357887642 444 34666666553211 00000 122221 11123
Q ss_pred EeccCCCCCC------C------Cc-ccccccccCCceeEEEEecCCCCceEEEEEeCCc-eEEEecCCCCccccccCCc
Q 001314 147 LVTPLSLSLM------P------PP-MYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGC-LCVVDLPAPDMLEDLEGTE 212 (1102)
Q Consensus 147 ~lTp~r~a~V------P------PP-M~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~-l~l~~~~~~~~~~~l~~~~ 212 (1102)
.+-.++...- + .| +... -.-..+|.+|+|++++ +.++....|++ +.+|++........+..
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g--~~l~s~s~d~~~v~iwd~~~~~~~~~~~~-- 236 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKS--DMVATCSQDGTIIRVFKTEDGVLVREFRR-- 236 (355)
T ss_dssp EEEECCC------------------CCEEE-CCCSSCEEEEEECTTS--SEEEEEETTCSEEEEEETTTCCEEEEEEC--
T ss_pred EEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCC--CEEEEEeCCCCEEEEEECCCCcEEEEEEc--
Confidence 3333332110 0 01 1111 1235689999999865 36777778898 99999864332211110
Q ss_pred eeeeeeccccccCceEEEEEecCceEEEEE
Q 001314 213 FVVEACISETAFGSVIHLIWLGSHLLLSVS 242 (1102)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~w~~~~~ll~~~ 242 (1102)
....+.+..++|..++.+++..
T Consensus 237 --------g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 237 --------GLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp --------TTCCSCEEEEEECTTSCEEEEE
T ss_pred --------CCCCCcEEEEEECCCCCEEEEE
Confidence 0123467788888777766643
No 145
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=96.83 E-value=0.023 Score=62.35 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=42.6
Q ss_pred hhchhHHHhhhcHHHHHHHHHHcCCCcHHH---HHHHHHHHhcchHHHHhcc-----CCcHhH-HHHHHHHHHHHhcccC
Q 001314 712 LMRYTIDLRLQRFENALKHIVSMGDSYHAD---CLNLMKKYAQLFPLGLKLI-----TDPAKM-EQVLEAWADHLSDVKC 782 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~g~~~~de---Aie~~~~~~~Ly~~AL~L~-----~d~~~~-~~i~~~yAd~L~~~~~ 782 (1102)
.....+....|++++|++.|.+.+ ..+- ........ +.+++|++.+ .+|+.. ..+...|...+...++
T Consensus 105 ~~la~~~~~~g~~~~Al~~l~~~~--~~~~~~~l~~~~~~~-g~~~~A~~~l~~~~~~~p~~~~~~l~~a~~~l~~~~~~ 181 (291)
T 3mkr_A 105 LMAASIYFYDQNPDAALRTLHQGD--SLECMAMTVQILLKL-DRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEK 181 (291)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTCC--SHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTTH
T ss_pred HHHHHHHHHCCCHHHHHHHHhCCC--CHHHHHHHHHHHHHC-CCHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhCchH
Confidence 344566667778888887777721 1221 11233454 6667776665 133332 2334445555555566
Q ss_pred hHHHHHHHHHc
Q 001314 783 FEDAATTYFCC 793 (1102)
Q Consensus 783 ~eeAa~~Y~~a 793 (1102)
+++|..+|.++
T Consensus 182 ~~eA~~~~~~~ 192 (291)
T 3mkr_A 182 LQDAYYIFQEM 192 (291)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66666666554
No 146
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=96.81 E-value=0.046 Score=58.24 Aligned_cols=27 Identities=26% Similarity=0.215 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 826 VAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 826 l~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.......+|..+...|++.+|...+.+
T Consensus 194 ~~~~~~~la~~~~~~g~~~~A~~~~~~ 220 (311)
T 3nf1_A 194 VAKTKNNLASCYLKQGKFKQAETLYKE 220 (311)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344666677777777777777777644
No 147
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.81 E-value=0.007 Score=63.14 Aligned_cols=107 Identities=17% Similarity=0.076 Sum_probs=49.0
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHcCC----H------HHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHH
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCCSS----L------EKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEEL 837 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~ag~----~------ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L 837 (1102)
++..+|..+...+++++|..+|.++-. . -....+|...|++++|+....+. ...+. .......+|..+
T Consensus 107 ~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~ 185 (252)
T 2ho1_A 107 VLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRN-QPSVALEMADLL 185 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcc-cHHHHHHHHHHH
Confidence 344445555555555555555554422 0 11123344445555544433221 00110 123455666666
Q ss_pred HHcCChHHHHHHHHHhcC----CH---HHHHHHHHHhcCHHHHHHH
Q 001314 838 QALGKPGEAAKIALDYCG----DV---TNGISLLIDARDWEEALRV 876 (1102)
Q Consensus 838 ~~~g~~~eAa~i~l~ylg----D~---e~AI~~y~~~~~W~eA~rL 876 (1102)
...|++.+|...+.+.+. +. .....+|.+.+++++|.+.
T Consensus 186 ~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~ 231 (252)
T 2ho1_A 186 YKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASY 231 (252)
T ss_dssp HHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHH
Confidence 667777777666644322 11 1233445555555555543
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.81 E-value=0.22 Score=54.22 Aligned_cols=114 Identities=9% Similarity=-0.024 Sum_probs=74.0
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccc------cceeeeeecCCCCeEEEEEeeCCCCe
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQID------STVELLKWNCMSDLLAAVVRFEEYDS 75 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~------~~v~~L~Wn~DS~iLAv~~~~~~~~~ 75 (1102)
..++|.|.|+.++.+.. ....|.+|+-+ |-....+.++.... ..+..+.|++|+..|.+... .....
T Consensus 92 ~~~~~s~dg~~l~v~~~-----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~~ 165 (353)
T 3vgz_A 92 FGATINNTTQTLWFGNT-----VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI-GKESV 165 (353)
T ss_dssp CSEEEETTTTEEEEEET-----TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEE-SSSCE
T ss_pred ceEEECCCCCEEEEEec-----CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEec-CCCce
Confidence 46889999996666552 24588899864 44456666653111 13788999999998877642 23457
Q ss_pred EEEEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEE
Q 001314 76 VKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYN 125 (1102)
Q Consensus 76 vqLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~ 125 (1102)
|.+|+..+.. +.+.+.........+.|+|.... |++...+|.+..++
T Consensus 166 i~~~d~~~~~--~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d 212 (353)
T 3vgz_A 166 IWVVDGGNIK--LKTAIQNTGKMSTGLALDSEGKR-LYTTNADGELITID 212 (353)
T ss_dssp EEEEETTTTE--EEEEECCCCTTCCCCEEETTTTE-EEEECTTSEEEEEE
T ss_pred EEEEcCCCCc--eEEEecCCCCccceEEECCCCCE-EEEEcCCCeEEEEE
Confidence 9999987755 23333312222245889987765 77766667776655
No 149
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=96.76 E-value=0.16 Score=56.20 Aligned_cols=117 Identities=15% Similarity=0.051 Sum_probs=74.6
Q ss_pred CcHhHHHHHHHHHHHHhcccC--------------------hHHHHHHHHHcCCH--------------HHHHHHHHHcC
Q 001314 762 DPAKMEQVLEAWADHLSDVKC--------------------FEDAATTYFCCSSL--------------EKAMKAYRASG 807 (1102)
Q Consensus 762 d~~~~~~i~~~yAd~L~~~~~--------------------~eeAa~~Y~~ag~~--------------ekAl~~y~~ag 807 (1102)
++.....++...|..+...++ |++|..+|.++-.. .....+|...|
T Consensus 122 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 201 (406)
T 3sf4_A 122 DKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLG 201 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT
T ss_pred cccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHcc
Confidence 444445677788888888888 88888877765221 12225566677
Q ss_pred CHHHHHHHHhh-------cCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc------CCHH-------HHHHHHHHh
Q 001314 808 NWSGVLTVAGL-------LKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC------GDVT-------NGISLLIDA 867 (1102)
Q Consensus 808 ~W~~al~lA~~-------l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl------gD~e-------~AI~~y~~~ 867 (1102)
+|++|+....+ .+ +.......+..+|..+...|++.+|...|.+-+ ++.. ....+|.+.
T Consensus 202 ~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 280 (406)
T 3sf4_A 202 NFRDAVIAHEQRLLIAKEFG-DKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 280 (406)
T ss_dssp BHHHHHHHHHHHHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHh
Confidence 77776654432 22 222334477888999999999999988775422 2222 234566777
Q ss_pred cCHHHHHHHHHh
Q 001314 868 RDWEEALRVAFM 879 (1102)
Q Consensus 868 ~~W~eA~rLa~~ 879 (1102)
++|++|+....+
T Consensus 281 g~~~~A~~~~~~ 292 (406)
T 3sf4_A 281 QDYEKAIDYHLK 292 (406)
T ss_dssp TCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 888888776543
No 150
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=96.75 E-value=0.044 Score=58.97 Aligned_cols=52 Identities=15% Similarity=0.003 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhc----CC---HHHHHHHHHHhcCHHHHHHHHHh
Q 001314 828 KLAQELCEELQALGKPGEAAKIALDYC----GD---VTNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD---~e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
.....+|..+...|++.+|...|.+.+ ++ .-....+|.+.++|++|+....+
T Consensus 237 ~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 295 (330)
T 3hym_B 237 PLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHT 295 (330)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 456677777777888888877765432 11 22345667777888888766554
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.73 E-value=0.26 Score=54.46 Aligned_cols=101 Identities=14% Similarity=0.080 Sum_probs=64.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe--cCC-------cce----eeeecCCccccceeeeeecCCCCeEEEEEee
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE--RNG-------LER----SSFDINEQIDSTVELLKWNCMSDLLAAVVRF 70 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE--RNG-------Lrh----geF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~ 70 (1102)
.++|.|.|++|+.+... ...|.+|. .++ |.. ..+.++ ....+..++|++||..|++..
T Consensus 159 ~~~~spdg~~l~~~~~~-----~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~-- 229 (361)
T 3scy_A 159 CVRITPDGKYLLADDLG-----TDQIHKFNINPNANADNKEKFLTKGTPEAFKVA--PGSGPRHLIFNSDGKFAYLIN-- 229 (361)
T ss_dssp EEEECTTSSEEEEEETT-----TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC--TTCCEEEEEECTTSSEEEEEE--
T ss_pred EEEECCCCCEEEEEeCC-----CCEEEEEEEcCCCCcccccceeecccccceecC--CCCCCeEEEEcCCCCEEEEEc--
Confidence 48999999977776532 34677774 433 322 234443 233577899999999988875
Q ss_pred CCCCeEEEEEcccceEEEEEEEEeccCC--C-ceEEecCCCCceEEE
Q 001314 71 EEYDSVKICFFSNNHWYLKYEIRYLRRD--G-IRFMWHPTKPLQLIC 114 (1102)
Q Consensus 71 ~~~~~vqLWt~~NYHWYLKqei~~~~~~--~-~~~~W~~e~pl~L~i 114 (1102)
.....|.+|...+-.+-..+.+...... . ..+.|+|.... |++
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~-l~v 275 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKY-LYA 275 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSE-EEE
T ss_pred CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCE-EEE
Confidence 3456899999887665555555432221 1 24788887654 555
No 152
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.72 E-value=0.079 Score=59.54 Aligned_cols=19 Identities=11% Similarity=0.153 Sum_probs=9.5
Q ss_pred hcCCcchhhHHHHHHhcCC
Q 001314 691 SQRDPKEFLPYLQELESMP 709 (1102)
Q Consensus 691 sqkDPkEYLpfL~~L~~le 709 (1102)
+.++|.+|-..|+.++..+
T Consensus 74 ~~~~~~~~~~~l~~i~~~~ 92 (378)
T 3q15_A 74 TYGNRPTVTELLETIETPQ 92 (378)
T ss_dssp ------CHHHHHHHHHGGG
T ss_pred ccccccchHHHHHHHhccC
Confidence 3456777778888887653
No 153
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.71 E-value=0.0085 Score=66.52 Aligned_cols=110 Identities=8% Similarity=0.009 Sum_probs=70.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
+++|.|.|++||+.. .+..|.+|+-...+.-...++......|..++|++|+..||... .+.|.+|+..+
T Consensus 175 ~~~~~pdg~~lasg~------~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~----~~~v~iwd~~~ 244 (343)
T 3lrv_A 175 SGVLHKDSLLLALYS------PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC----DQTVVCFDLRK 244 (343)
T ss_dssp EEEECTTSCEEEEEC------TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE----SSBEEEEETTS
T ss_pred EEEECCCCCEEEEEc------CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe----CCeEEEEEcCC
Confidence 579999999999865 35689999854433321223331234799999999999999876 33899999877
Q ss_pred ceEEEEEEEEe-ccC-CC---ceEEecCCCCceEEEEee-CCcEEEEEE
Q 001314 84 NHWYLKYEIRY-LRR-DG---IRFMWHPTKPLQLICWTL-DGQITTYNF 126 (1102)
Q Consensus 84 YHWYLKqei~~-~~~-~~---~~~~W~~e~pl~L~i~t~-~g~~~~~~~ 126 (1102)
..=. +.+.. ... .. .++.|+|...+ |++++. ++.+.++++
T Consensus 245 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 245 DVGT--LAYPTYTIPEFKTGTVTYDIDDSGKN-MIAYSNESNSLTIYKF 290 (343)
T ss_dssp STTC--BSSCCCBC-----CCEEEEECTTSSE-EEEEETTTTEEEEEEE
T ss_pred CCcc--eeecccccccccccceEEEECCCCCE-EEEecCCCCcEEEEEE
Confidence 5411 11110 000 11 24899998776 666555 666666543
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.70 E-value=0.19 Score=55.27 Aligned_cols=115 Identities=10% Similarity=0.012 Sum_probs=68.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC--Ccce--eeeecCC--c----cccceeeeeecCCCCeEEEEEeeCCC
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN--GLER--SSFDINE--Q----IDSTVELLKWNCMSDLLAAVVRFEEY 73 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN--GLrh--geF~L~~--~----~~~~v~~L~Wn~DS~iLAv~~~~~~~ 73 (1102)
.++|.|.|++++++.. ....|.+|.-+ |-.. ..+...+ + ....+..++|++||. |.+. ....
T Consensus 90 ~~a~spdg~~l~~~~~-----~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~--~~~~ 161 (347)
T 3hfq_A 90 YVAVDEARQLVYSANY-----HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVI--DLGS 161 (347)
T ss_dssp EEEEETTTTEEEEEET-----TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEE--ETTT
T ss_pred EEEECCCCCEEEEEeC-----CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEE--eCCC
Confidence 4889999998888763 24578888754 3221 2222211 1 122478899999999 4443 2445
Q ss_pred CeEEEEEcc-cceEEEEEEEEeccCCC-ceEEecCCCCceEEEEe-eCCcEEEEEEE
Q 001314 74 DSVKICFFS-NNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWT-LDGQITTYNFI 127 (1102)
Q Consensus 74 ~~vqLWt~~-NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t-~~g~~~~~~~~ 127 (1102)
+.|.+|... +-..-....+....... ..+.|+|.... |++.. .++.+.++++.
T Consensus 162 ~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~-l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 162 DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQY-AFLAGELSSQIASLKYD 217 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSE-EEEEETTTTEEEEEEEE
T ss_pred CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCE-EEEEeCCCCEEEEEEec
Confidence 689999987 55533333333333323 45899998764 55533 34566666554
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.67 E-value=0.98 Score=49.40 Aligned_cols=147 Identities=10% Similarity=0.025 Sum_probs=77.4
Q ss_pred ceeeeeecCCCCeEEEEEeeCCCCeEEEEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEe-eCCcEEEEEEE--
Q 001314 51 TVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWT-LDGQITTYNFI-- 127 (1102)
Q Consensus 51 ~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t-~~g~~~~~~~~-- 127 (1102)
.+..++|++|+. |.+.........|.+|...+-.+-....+.........+.|+|.... |++.. .+|.+.+++..
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~-l~~~~~~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQL-VYSANYHKGTAEVMKIAAD 118 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTE-EEEEETTTTEEEEEEECTT
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCE-EEEEeCCCCEEEEEEeCCC
Confidence 577899999999 55554323346899999876665333332222223346899998765 55544 34666666552
Q ss_pred --E----e-------------------eeecCCcEEEEEe--CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCC
Q 001314 128 --W----T-------------------TAVMENSTALVID--GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKS 180 (1102)
Q Consensus 128 --w----~-------------------~~~~d~~~vaVID--G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~ 180 (1102)
. . +..+.+|-+.|.| +++|.+-.+...--..+.....+.....+.+++|++++
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg 198 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDG 198 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTS
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCC
Confidence 0 0 1112222244443 23444444431000111111122223356789999875
Q ss_pred CCceEEEE-EeCCceEEEecCC
Q 001314 181 SKNCLAAI-LSDGCLCVVDLPA 201 (1102)
Q Consensus 181 ~~~~~a~v-l~~~~l~l~~~~~ 201 (1102)
. .+.+. ..++.+.+|.+..
T Consensus 199 ~--~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 199 Q--YAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp S--EEEEEETTTTEEEEEEEET
T ss_pred C--EEEEEeCCCCEEEEEEecC
Confidence 3 23332 3457788888753
No 156
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.66 E-value=0.078 Score=55.63 Aligned_cols=110 Identities=13% Similarity=0.020 Sum_probs=68.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc-
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS- 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~- 82 (1102)
.++|.|.|++||+..... +....|..++.+|-....+... ..+..+.|++|+..|++.... ...++||...
T Consensus 89 ~~~~spdg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~~~~~~--~~~~~l~~~~~ 160 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVE--FGKSAIYLLPSTGGTPRLMTKN----LPSYWHGWSPDGKSFTYCGIR--DQVFDIYSMDI 160 (297)
T ss_dssp CCEECTTSSEEEEEECTT--TSSCEEEEEETTCCCCEECCSS----SSEEEEEECTTSSEEEEEEEE--TTEEEEEEEET
T ss_pred ceEECCCCCEEEEEEeCC--CCcceEEEEECCCCceEEeecC----CCccceEECCCCCEEEEEECC--CCceEEEEEEC
Confidence 489999999999987432 1256777777666543333222 247889999999999876532 3468888743
Q ss_pred -cceEEEEEEEEeccC-CC-ceEEecCCCCceEEEEe-eCCcEEEEEEE
Q 001314 83 -NNHWYLKYEIRYLRR-DG-IRFMWHPTKPLQLICWT-LDGQITTYNFI 127 (1102)
Q Consensus 83 -NYHWYLKqei~~~~~-~~-~~~~W~~e~pl~L~i~t-~~g~~~~~~~~ 127 (1102)
+-. ...+... .. .++.|+|.... |++.+ .+|.+.++.+.
T Consensus 161 ~~~~-----~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 161 DSGV-----ETRLTHGEGRNDGPDYSPDGRW-IYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp TTCC-----EEECCCSSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEE
T ss_pred CCCc-----ceEcccCCCccccceECCCCCE-EEEEecCCCCccEEEEC
Confidence 222 1122221 22 45899998765 55434 35666665543
No 157
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.63 E-value=0.021 Score=62.19 Aligned_cols=88 Identities=14% Similarity=-0.031 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHc-CChHHHHHHHHHhc------CC
Q 001314 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQAL-GKPGEAAKIALDYC------GD 856 (1102)
Q Consensus 784 eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~-g~~~eAa~i~l~yl------gD 856 (1102)
..++.+|...|++++|+++|.+ |+.+....+. .......+..+|..+... |++.+|...|.+-+ ++
T Consensus 81 ~~lg~~~~~~g~~~~A~~~~~~------Al~l~~~~g~-~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~~ 153 (292)
T 1qqe_A 81 VEAYKCFKSGGNSVNAVDSLEN------AIQIFTHRGQ-FRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153 (292)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH------HHHHHHHTTC-HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCHHHHHHHHHH------HHHHHHHcCC-HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCCC
Confidence 3445555555555555555443 3344333321 112234566677777775 88888877764422 22
Q ss_pred HH-------HHHHHHHHhcCHHHHHHHHH
Q 001314 857 VT-------NGISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 857 ~e-------~AI~~y~~~~~W~eA~rLa~ 878 (1102)
.. ....+|.+.++|++|+....
T Consensus 154 ~~~~~~~~~~lg~~~~~~g~~~~A~~~~~ 182 (292)
T 1qqe_A 154 VALSNKCFIKCADLKALDGQYIEASDIYS 182 (292)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 21 12456667777777775433
No 158
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=96.63 E-value=0.0099 Score=60.19 Aligned_cols=25 Identities=4% Similarity=-0.036 Sum_probs=13.0
Q ss_pred HHHHHHHHHhcc-cChHHHHHHHHHc
Q 001314 769 VLEAWADHLSDV-KCFEDAATTYFCC 793 (1102)
Q Consensus 769 i~~~yAd~L~~~-~~~eeAa~~Y~~a 793 (1102)
++..+|..+... +++++|..+|.++
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~~~~ 103 (225)
T 2vq2_A 78 INNNYGWFLCGRLNRPAESMAYFDKA 103 (225)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 344455555555 5555555555544
No 159
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=96.60 E-value=0.44 Score=53.31 Aligned_cols=26 Identities=19% Similarity=0.137 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 827 AKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 827 ~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
......+|..+...|++.+|...+.+
T Consensus 261 ~~~~~~la~~~~~~g~~~~A~~~~~~ 286 (378)
T 3q15_A 261 PKVLFGLSWTLCKAGQTQKAFQFIEE 286 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 45677788888888888888877644
No 160
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=96.60 E-value=0.36 Score=54.00 Aligned_cols=89 Identities=16% Similarity=0.051 Sum_probs=52.2
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc------CCHHH-
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC------GDVTN- 859 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl------gD~e~- 859 (1102)
+.+|...|++++|++.|.+ ++.++...+..+ ........+|..+...|++.+|...+.+-+ +++..
T Consensus 231 g~~y~~~g~~~~A~~~~~~------al~~~~~~~~~~-~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~ 303 (383)
T 3ulq_A 231 GLCKNSQSQYEDAIPYFKR------AIAVFEESNILP-SLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYL 303 (383)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHHHHHTTCGG-GHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHCCCHHHHHHHHHH------HHHHHHhhccch-hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 3444455555555555443 444444443212 334567788888888999988887764422 34432
Q ss_pred -----HHHHHHHhcC---HHHHHHHHHhcCC
Q 001314 860 -----GISLLIDARD---WEEALRVAFMHRR 882 (1102)
Q Consensus 860 -----AI~~y~~~~~---W~eA~rLa~~h~~ 882 (1102)
--.+|...++ +++|+.+..+...
T Consensus 304 ~~~~~l~~~~~~~~~~~~~~~al~~~~~~~~ 334 (383)
T 3ulq_A 304 SEFEFLKSLYLSGPDEEAIQGFFDFLESKML 334 (383)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHCcC
Confidence 2234555556 8888888877643
No 161
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=96.58 E-value=0.043 Score=63.47 Aligned_cols=131 Identities=14% Similarity=0.190 Sum_probs=90.0
Q ss_pred hHHHHHHHHHhhcchHHHHHHHHhccCHHHHHHHHHHhcCCcchhhHHHHHHhcCChhhhchhHHHhhh------cHHHH
Q 001314 654 SAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNSQRDPKEFLPYLQELESMPPLLMRYTIDLRLQ------RFENA 727 (1102)
Q Consensus 654 ~ae~alk~l~fLvDvn~Ly~~ALg~YDl~Lal~VAq~sqkDPkEYLpfL~~L~~le~~~rr~~Id~~Lk------ryekA 727 (1102)
.+|+.|+-.+.+=|.+.=-+.+|..=-+-=|+++|. ..+|.-|. ++.+ ..|+. .|-..
T Consensus 145 ~~d~~I~~aLl~Gd~e~AV~~cl~~~r~adAllLA~--~gg~el~~---~~vq-----------~~Y~~k~~~~~~~~rl 208 (399)
T 2pm7_A 145 NIEQTISKNLVSGNIKSAVKNSLENDLMMEAMVIAL--DSNNERLK---ESVK-----------NAYFAKYGSKSSLSRI 208 (399)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTTCHHHHHHHHT--TCCCHHHH---HHHH-----------HHHHHHHTTSCHHHHH
T ss_pred hHHHHHHHHHHcCCHHHHHHHHHHCCChHHHHHHHH--hcCHHHHH---HHHH-----------HHHHHhcccCchHHHH
Confidence 455666666666666666666777777777888885 46664320 1111 11221 23333
Q ss_pred HHHHHHcCCCcHHHHHHHHHHHhcchHHHHhcc---CCcH--hHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHH
Q 001314 728 LKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI---TDPA--KMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKA 802 (1102)
Q Consensus 728 l~hl~~~g~~~~deAie~~~~~~~Ly~~AL~L~---~d~~--~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~ 802 (1102)
+..+.. ++ +++.+.-. +. ..|+++|.++ .+++ ++..+|...|+-|+..+..+.|.+.|+.||+.++.+.+
T Consensus 209 l~~iv~-~n--~~d~V~~~-~l-~~WkE~La~i~t~a~~e~~ef~~Lc~~LG~RL~~~g~~~~A~lCYi~Ag~~dk~v~i 283 (399)
T 2pm7_A 209 LYSISK-RE--VDDLVENL-DV-SQWKFISKAIQNLYPNDIAQRNEMMIKLGDRMKENGHRQDSLTLYLAAGSLDKVASI 283 (399)
T ss_dssp HHHHHT-TC--CHHHHHHB-CG-GGHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHc-cC--HHHHHhcC-Ch-hhHHHHHHHHHhcCCccHhHHHHHHHHHHHHHHhCCChhhhhHHHHhhCCHHHHHHH
Confidence 433332 32 45544432 56 7899999987 5778 89999999999999999999999999999999999999
Q ss_pred HHH
Q 001314 803 YRA 805 (1102)
Q Consensus 803 y~~ 805 (1102)
+..
T Consensus 284 W~~ 286 (399)
T 2pm7_A 284 WLS 286 (399)
T ss_dssp HHH
T ss_pred HHH
Confidence 865
No 162
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.0087 Score=62.03 Aligned_cols=78 Identities=8% Similarity=-0.046 Sum_probs=48.6
Q ss_pred hchhHHHhhhcHHHHHHHHHHcCCCcHHHHHHHHHHHhcchHHHHhcc----CCcHhHHHHHHHHHHHHhcccChHHHHH
Q 001314 713 MRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI----TDPAKMEQVLEAWADHLSDVKCFEDAAT 788 (1102)
Q Consensus 713 rr~~Id~~LkryekAl~hl~~~g~~~~deAie~~~~~~~Ly~~AL~L~----~d~~~~~~i~~~yAd~L~~~~~~eeAa~ 788 (1102)
....+...+|+|++|+..|.++-. .+.--+..... +.|++|++.+ ........++...|..+...++|++|..
T Consensus 84 ~l~~~~~~~~~~~~A~~~~~~a~~--~~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~ 160 (258)
T 3uq3_A 84 RIGNAYHKLGDLKKTIEYYQKSLT--EHRTADILTKL-RNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVK 160 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH--HCCCHHHHHHH-HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHcccHHHHHHHHHHHHh--cCchhHHHHHH-hHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHH
Confidence 345666678999999998877521 10012234455 6777888777 1223344566667777777777777777
Q ss_pred HHHHc
Q 001314 789 TYFCC 793 (1102)
Q Consensus 789 ~Y~~a 793 (1102)
+|.++
T Consensus 161 ~~~~a 165 (258)
T 3uq3_A 161 AYTEM 165 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66665
No 163
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=96.55 E-value=0.0075 Score=64.97 Aligned_cols=134 Identities=10% Similarity=0.018 Sum_probs=62.8
Q ss_pred chhHHHhhhcHHHHHHHHHHcC---CCcHHHH-----------------HH-HHHHHhcchHHHHhcc-----CCcHhHH
Q 001314 714 RYTIDLRLQRFENALKHIVSMG---DSYHADC-----------------LN-LMKKYAQLFPLGLKLI-----TDPAKME 767 (1102)
Q Consensus 714 r~~Id~~LkryekAl~hl~~~g---~~~~deA-----------------ie-~~~~~~~Ly~~AL~L~-----~d~~~~~ 767 (1102)
...+...+|+|++|+..|.++- +...... -. ..... +.|++|++++ .+|. ..
T Consensus 95 la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~~~~~~~~-~~ 172 (327)
T 3cv0_A 95 LAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAP-NEYRECRTLLHAALEMNPN-DA 172 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC--------------------CCTTSH-HHHHHHHHHHHHHHHHSTT-CH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHc-ccHHHHHHHHHHHHhhCCC-CH
Confidence 3455667888888888877641 1100000 00 12233 4455555554 1221 12
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHH
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQ 838 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~ 838 (1102)
.++...|..+...+++++|..+|.++-. +.....+|...|+|++|+....+. ...++ .......+|..+.
T Consensus 173 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~ 251 (327)
T 3cv0_A 173 QLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYNRALDINPG-YVRVMYNMAVSYS 251 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHH
Confidence 4455566666666666666666665411 112234455555565555443321 11111 1123444555555
Q ss_pred HcCChHHHHHHH
Q 001314 839 ALGKPGEAAKIA 850 (1102)
Q Consensus 839 ~~g~~~eAa~i~ 850 (1102)
..|++.+|...|
T Consensus 252 ~~g~~~~A~~~~ 263 (327)
T 3cv0_A 252 NMSQYDLAAKQL 263 (327)
T ss_dssp HTTCHHHHHHHH
T ss_pred HhccHHHHHHHH
Confidence 555555555544
No 164
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.54 E-value=0.17 Score=54.10 Aligned_cols=156 Identities=14% Similarity=0.151 Sum_probs=92.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCC-ccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINE-QIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~-~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
.++|.|.|+++++.. .+..|.+|+-. |-....+.... .....|..+.|++++.-+...........|.+|..
T Consensus 155 ~~~~~~~~~~l~s~~------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 155 GLRWAPDGRHLASGG------NDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp EEEECTTSSEEEEEE------TTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred EEEEcCCCCEEEEEe------cCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence 467899999999876 35678888743 22111111111 12335899999998877665554444568999998
Q ss_pred ccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEe--eCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCCC
Q 001314 82 SNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWT--LDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPP 158 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t--~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPP 158 (1102)
....-.. . ...... ..+.|++.... +++++ .+|.+.+ |++. ....+..+.|
T Consensus 229 ~~~~~~~---~-~~~~~~v~~~~~~~~~~~-~~~~sg~~d~~i~i----wd~~--~~~~~~~l~g--------------- 282 (318)
T 4ggc_A 229 CSGACLS---A-VDAHSQVCSILWSPHYKE-LISGHGFAQNQLVI----WKYP--TMAKVAELKG--------------- 282 (318)
T ss_dssp TTCCEEE---E-EECSSCEEEEEEETTTTE-EEEEECTTTCCEEE----EETT--TCCEEEEECC---------------
T ss_pred ccccccc---c-ccceeeeeeeeecccccc-eEEEEEcCCCEEEE----EECC--CCcEEEEEcC---------------
Confidence 8876321 1 112222 45788887766 43323 3455543 3221 1111111111
Q ss_pred cccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 159 PMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 159 PM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
-..+|.+|+|++++. .|+..-.|+++.+|++.+
T Consensus 283 --------H~~~V~~l~~spdg~--~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 283 --------HTSRVLSLTMSPDGA--TVASAAADETLRLWRCFE 315 (318)
T ss_dssp --------CSSCEEEEEECTTSS--CEEEEETTTEEEEECCSC
T ss_pred --------CCCCEEEEEEcCCCC--EEEEEecCCeEEEEECCC
Confidence 245799999998654 566667889999998754
No 165
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=96.53 E-value=0.05 Score=59.60 Aligned_cols=126 Identities=12% Similarity=0.004 Sum_probs=71.9
Q ss_pred hhhcHHHHHHHHHHcCCCcHHH---H----HHHHHHHhcchHHHHhcc--CCcHhHHHHHHHHHHHHhcccChHHHHHHH
Q 001314 720 RLQRFENALKHIVSMGDSYHAD---C----LNLMKKYAQLFPLGLKLI--TDPAKMEQVLEAWADHLSDVKCFEDAATTY 790 (1102)
Q Consensus 720 ~LkryekAl~hl~~~g~~~~de---A----ie~~~~~~~Ly~~AL~L~--~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y 790 (1102)
|+|+|.+|++.+.+......+. + ...+... +.|+.|+..+ .++. .......+|+++...+++++|...|
T Consensus 11 ~~g~y~~ai~~~~~~~~~~p~~~~e~~~~l~r~yi~~-g~~~~al~~~~~~~~~-~~~a~~~la~~~~~~~~~~~A~~~l 88 (291)
T 3mkr_A 11 YIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQ-RKYGVVLDEIKPSSAP-ELQAVRMFAEYLASHSRRDAIVAEL 88 (291)
T ss_dssp HTTCHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHT-TCHHHHHHHSCTTSCH-HHHHHHHHHHHHHCSTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCchhhHHHHHHHHHHHHHC-CCHHHHHHHhcccCCh-hHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 5777777777766543211221 1 1223455 6777777766 2232 3355666777777777777777777
Q ss_pred HHc---C----CHH---HHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 791 FCC---S----SLE---KAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 791 ~~a---g----~~e---kAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.+. + +.. ..-.+|...|++++|+....+ +.+. +....++..+...|++.+|...|.+
T Consensus 89 ~~ll~~~~~P~~~~~~~~la~~~~~~g~~~~Al~~l~~-~~~~----~~~~~l~~~~~~~g~~~~A~~~l~~ 155 (291)
T 3mkr_A 89 DREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ-GDSL----ECMAMTVQILLKLDRLDLARKELKK 155 (291)
T ss_dssp HHHHHSCCCCSCHHHHHHHHHHHHHTTCHHHHHHHHTT-CCSH----HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHhcccCCCCHHHHHHHHHHHHHCCCHHHHHHHHhC-CCCH----HHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 652 1 111 112556667777777776665 2221 3455566666677777777766644
No 166
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.52 E-value=0.76 Score=49.86 Aligned_cols=160 Identities=13% Similarity=0.036 Sum_probs=92.2
Q ss_pred ceeeccCCCeEEEEeeccCC-CCCCeEEEEecCCc-ceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSE-NKCPSIVFYERNGL-ERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~-~~~~~VvFFERNGL-rhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
.++|.|.|+.|+++...... .....|..|+.++. ....+.... .+..+.|++|+..|.+.. .....|.+|+.
T Consensus 45 ~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~----~~~~~~~s~dg~~l~v~~--~~~~~v~~~d~ 118 (353)
T 3vgz_A 45 EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL----KPFGATINNTTQTLWFGN--TVNSAVTAIDA 118 (353)
T ss_dssp EEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS----CCCSEEEETTTTEEEEEE--TTTTEEEEEET
T ss_pred ceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC----CcceEEECCCCCEEEEEe--cCCCEEEEEeC
Confidence 47899999988877632100 01457999987644 344454432 477899999999877764 34568999998
Q ss_pred ccceEEEEEEEEeccCC---------CceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCC
Q 001314 82 SNNHWYLKYEIRYLRRD---------GIRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLS 152 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~---------~~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r 152 (1102)
.+-. +...+..+... ...+.|+|.... +++.. ..+++.+.++|..+-.+..
T Consensus 119 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~-l~~~~---------------~~~~~~i~~~d~~~~~~~~-- 178 (353)
T 3vgz_A 119 KTGE--VKGRLVLDDRKRTEEVRPLQPRELVADDATNT-VYISG---------------IGKESVIWVVDGGNIKLKT-- 178 (353)
T ss_dssp TTCC--EEEEEESCCCCCCSSCCCCEEEEEEEETTTTE-EEEEE---------------ESSSCEEEEEETTTTEEEE--
T ss_pred CCCe--eEEEEecCCCccccccCCCCCceEEECCCCCE-EEEEe---------------cCCCceEEEEcCCCCceEE--
Confidence 7655 23344443211 123566665443 33322 1235667777754332211
Q ss_pred CCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 153 LSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 153 ~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
.+|. ....+.+++|++++. .+++...++.+.+|+...
T Consensus 179 --~~~~--------~~~~~~~~~~s~dg~--~l~~~~~~~~i~~~d~~~ 215 (353)
T 3vgz_A 179 --AIQN--------TGKMSTGLALDSEGK--RLYTTNADGELITIDTAD 215 (353)
T ss_dssp --EECC--------CCTTCCCCEEETTTT--EEEEECTTSEEEEEETTT
T ss_pred --EecC--------CCCccceEEECCCCC--EEEEEcCCCeEEEEECCC
Confidence 0110 122356778887654 455556677888887643
No 167
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=96.52 E-value=0.11 Score=58.17 Aligned_cols=163 Identities=12% Similarity=0.012 Sum_probs=91.1
Q ss_pred hhHHHhhhcHHHHHHHHHHcCC------CcHHHHH------HHHHHHhcchHHHHhcc----------CCcHhHHHHHHH
Q 001314 715 YTIDLRLQRFENALKHIVSMGD------SYHADCL------NLMKKYAQLFPLGLKLI----------TDPAKMEQVLEA 772 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~g~------~~~deAi------e~~~~~~~Ly~~AL~L~----------~d~~~~~~i~~~ 772 (1102)
..+...+|+|++|+.+|.++-. +....+. .+.... +.|++|++.+ .++.....++..
T Consensus 93 g~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~ 171 (411)
T 4a1s_A 93 GNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVM-GRFDEAAICCERHLTLARQLGDRLSEGRALYN 171 (411)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 4445556777777776654310 0111111 111233 4555555544 234445567778
Q ss_pred HHHHHhcccC-----------------hHHHHHHHHHcCCH--------------HHHHHHHHHcCCHHHHHHHHhhc-C
Q 001314 773 WADHLSDVKC-----------------FEDAATTYFCCSSL--------------EKAMKAYRASGNWSGVLTVAGLL-K 820 (1102)
Q Consensus 773 yAd~L~~~~~-----------------~eeAa~~Y~~ag~~--------------ekAl~~y~~ag~W~~al~lA~~l-~ 820 (1102)
.|..+...++ |++|..+|.++-.. .....+|...|+|++|+....+. .
T Consensus 172 l~~~~~~~g~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 251 (411)
T 4a1s_A 172 LGNVYHAKGKHLGQRNPGKFGDDVKEALTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLR 251 (411)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHcCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 8888888888 88888877765221 11224566777777766554331 0
Q ss_pred -----CChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc------CCH-------HHHHHHHHHhcCHHHHHHHHH
Q 001314 821 -----LGKDEVAKLAQELCEELQALGKPGEAAKIALDYC------GDV-------TNGISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 821 -----~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl------gD~-------e~AI~~y~~~~~W~eA~rLa~ 878 (1102)
.+..........+|..+...|++.+|...|.+.+ ++. ..-..+|...++|++|+....
T Consensus 252 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 327 (411)
T 4a1s_A 252 IAREFGDRAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHN 327 (411)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 1122233467778888888888888888764422 111 123345667777777766544
No 168
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.50 E-value=0.23 Score=53.79 Aligned_cols=178 Identities=12% Similarity=0.067 Sum_probs=101.4
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce--eeeecCCccccceee-eeecCCCCeEEEEEeeCCCC--eEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER--SSFDINEQIDSTVEL-LKWNCMSDLLAAVVRFEEYD--SVKI 78 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh--geF~L~~~~~~~v~~-L~Wn~DS~iLAv~~~~~~~~--~vqL 78 (1102)
.++|.|.|+.++++.. ....|..|+..+-+. ..+... ..... +.|++|+..|++.. .... .|.+
T Consensus 44 ~~~~s~dg~~l~~~~~-----~~~~i~~~d~~~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~--~~~~~~~i~v 112 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSD-----FCQTLVQIETQLEPPKVVAIQEG----QSSMADVDITPDDQFAVTVT--GLNHPFNMQS 112 (331)
T ss_dssp EEEECSSSCEEEEEES-----TTCEEEEEECSSSSCEEEEEEEC----SSCCCCEEECTTSSEEEECC--CSSSSCEEEE
T ss_pred eEEEcCCCCEEEEEeC-----CCCeEEEEECCCCceeEEecccC----CCCccceEECCCCCEEEEec--CCCCcccEEE
Confidence 5789999997766653 245888888765442 222221 23445 99999999999322 2223 8999
Q ss_pred EEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeC-Cc-EEEEEEE-----Eee--------------eec-CCc
Q 001314 79 CFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLD-GQ-ITTYNFI-----WTT--------------AVM-ENS 136 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~-g~-~~~~~~~-----w~~--------------~~~-d~~ 136 (1102)
|....... .+.+..+ .....+.|+|.... |++.... +. +.+|++. ... ..+ |..
T Consensus 113 ~d~~~~~~--~~~~~~~-~~~~~~~~spdg~~-l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~ 188 (331)
T 3u4y_A 113 YSFLKNKF--ISTIPIP-YDAVGIAISPNGNG-LILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGN 188 (331)
T ss_dssp EETTTTEE--EEEEECC-TTEEEEEECTTSSC-EEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSS
T ss_pred EECCCCCe--EEEEECC-CCccceEECCCCCE-EEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCC
Confidence 99988762 4444432 12246899998765 5554433 66 7766531 111 122 333
Q ss_pred EEEEEe--CCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEE-eCCceEEEecC
Q 001314 137 TALVID--GSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAIL-SDGCLCVVDLP 200 (1102)
Q Consensus 137 ~vaVID--G~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl-~~~~l~l~~~~ 200 (1102)
.++|.+ +.+|.+-.+...-++.+ ...+.....+.+++|++++. .+.+.. .++.+.+|+..
T Consensus 189 ~l~v~~~~~~~v~v~d~~~~~~~~~--~~~~~~~~~~~~~~~spdg~--~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 189 FAFVANLIGNSIGILETQNPENITL--LNAVGTNNLPGTIVVSRDGS--TVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp EEEEEETTTTEEEEEECSSTTSCEE--EEEEECSSCCCCEEECTTSS--EEEEECSSEEEEEEEETT
T ss_pred EEEEEeCCCCeEEEEECCCCcccce--eeeccCCCCCceEEECCCCC--EEEEEEcCCCEEEEEECC
Confidence 455544 44566655554332111 22344456677899988754 233322 24556666653
No 169
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.48 E-value=0.042 Score=59.64 Aligned_cols=24 Identities=13% Similarity=-0.049 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
..+..+|..+...|+|.+|...+.
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~ 220 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVN 220 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHH
Confidence 355556666666666666666553
No 170
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=96.46 E-value=0.015 Score=62.51 Aligned_cols=131 Identities=7% Similarity=-0.006 Sum_probs=80.2
Q ss_pred HHhhhcHHHHHHHHHHc---CCCcHH---HHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccChHHH
Q 001314 718 DLRLQRFENALKHIVSM---GDSYHA---DCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCFEDA 786 (1102)
Q Consensus 718 d~~LkryekAl~hl~~~---g~~~~d---eAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~eeA 786 (1102)
....|++++|+..+.++ .++... ..-...... +.|++|++.+ .+|.. ..++...|..+...+++++|
T Consensus 148 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~A 225 (327)
T 3cv0_A 148 FAAPNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLS-NNYDSAAANLRRAVELRPDD-AQLWNKLGATLANGNRPQEA 225 (327)
T ss_dssp TTSHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHHHH
T ss_pred HHHcccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHcCCHHHH
Confidence 44578899999888764 221111 111223455 7888888877 13322 35677788888899999999
Q ss_pred HHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChH-----------HHHHHHHHHHHHHHHcCChHHH
Q 001314 787 ATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKD-----------EVAKLAQELCEELQALGKPGEA 846 (1102)
Q Consensus 787 a~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~-----------el~~l~~~lA~~L~~~g~~~eA 846 (1102)
..+|.++-. +-....+|...|+|++|+....+. ...++ ........++..+...|++.+|
T Consensus 226 ~~~~~~a~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A 305 (327)
T 3cv0_A 226 LDAYNRALDINPGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMNRPDLV 305 (327)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcCCHHHH
Confidence 999988621 223346778888888887665432 00010 0234555666666666666666
Q ss_pred HHHH
Q 001314 847 AKIA 850 (1102)
Q Consensus 847 a~i~ 850 (1102)
..++
T Consensus 306 ~~~~ 309 (327)
T 3cv0_A 306 ELTY 309 (327)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6654
No 171
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.46 E-value=0.21 Score=61.26 Aligned_cols=69 Identities=6% Similarity=0.090 Sum_probs=52.1
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecCCc---ceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEE
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGL---ERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKIC 79 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGL---rhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLW 79 (1102)
..++|.|.|.+||.+.. ..|.+|+-+|- ....+ .. ....+..++|++||..||... .+.|.+|
T Consensus 112 ~~~~~SpDg~~l~~~~~-------~~i~~~d~~~~~~~~~~~l--~~-~~~~~~~~~~SPDG~~la~~~----~~~i~~~ 177 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-------GELYLYDLKQEGKAAVRQL--TH-GEGFATDAKLSPKGGFVSFIR----GRNLWVI 177 (741)
T ss_dssp CCCEECTTSSEEEEEET-------TEEEEEESSSCSTTSCCBC--CC-SSSCEEEEEECTTSSEEEEEE----TTEEEEE
T ss_pred ceeEECCCCCEEEEEeC-------CcEEEEECCCCCcceEEEc--cc-CCcccccccCCCCCCEEEEEe----CCcEEEE
Confidence 46899999999999862 58999998775 33222 21 123588999999999999875 3589999
Q ss_pred Ecccce
Q 001314 80 FFSNNH 85 (1102)
Q Consensus 80 t~~NYH 85 (1102)
....-.
T Consensus 178 d~~~g~ 183 (741)
T 2ecf_A 178 DLASGR 183 (741)
T ss_dssp ETTTTE
T ss_pred ecCCCC
Confidence 987754
No 172
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.45 E-value=0.71 Score=52.69 Aligned_cols=201 Identities=12% Similarity=0.108 Sum_probs=109.9
Q ss_pred CCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcccceEEE
Q 001314 10 SGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWYL 88 (1102)
Q Consensus 10 sGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~NYHWYL 88 (1102)
+|+.|++.. .+..|.+|+-+ |-....+ +. ....|..+.| |++.|++.. ....|.+|...+.. .
T Consensus 208 ~~~~l~s~s------~dg~i~~wd~~~~~~~~~~--~~-~~~~v~~~~~--~~~~l~~~~---~dg~i~iwd~~~~~--~ 271 (445)
T 2ovr_B 208 HEKRVVSGS------RDATLRVWDIETGQCLHVL--MG-HVAAVRCVQY--DGRRVVSGA---YDFMVKVWDPETET--C 271 (445)
T ss_dssp ETTEEEEEE------TTSEEEEEESSSCCEEEEE--EC-CSSCEEEEEE--CSSCEEEEE---TTSCEEEEEGGGTE--E
T ss_pred cCCEEEEEe------CCCEEEEEECCCCcEEEEE--cC-CcccEEEEEE--CCCEEEEEc---CCCEEEEEECCCCc--E
Confidence 466677665 35688888854 3332232 22 2336888999 788888765 24579999988765 1
Q ss_pred EEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Eeeeec---------CCcEEEE-EeCCeEEeccCC
Q 001314 89 KYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTTAVM---------ENSTALV-IDGSKILVTPLS 152 (1102)
Q Consensus 89 Kqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~~~~---------d~~~vaV-IDG~~l~lTp~r 152 (1102)
..++. +.... .++.|+ ...|+.++.+|.+.+++.. +....+ +...+++ -+..+|.+-.++
T Consensus 272 ~~~~~-~~~~~v~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~ 347 (445)
T 2ovr_B 272 LHTLQ-GHTNRVYSLQFD---GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 347 (445)
T ss_dssp EEEEC-CCSSCEEEEEEC---SSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred eEEec-CCCCceEEEEEC---CCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECC
Confidence 22222 11222 357883 3457777778888776642 111111 1122222 112234444443
Q ss_pred CCCCCCccccccc--ccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccccccCceEEE
Q 001314 153 LSLMPPPMYLFSL--KFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISETAFGSVIHL 230 (1102)
Q Consensus 153 ~a~VPPPM~~~~l--~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 230 (1102)
.. .++..... ....+|.+++|++ +.+++...+|++.+|++........+ .........+.+..+
T Consensus 348 ~~---~~~~~~~~~~~~~~~v~~~~~~~----~~l~s~~~dg~v~iwd~~~~~~~~~~-------~~~~~~~~~~~v~~~ 413 (445)
T 2ovr_B 348 TG---QCLQTLQGPNKHQSAVTCLQFNK----NFVITSSDDGTVKLWDLKTGEFIRNL-------VTLESGGSGGVVWRI 413 (445)
T ss_dssp TC---CEEEEECSTTSCSSCEEEEEECS----SEEEEEETTSEEEEEETTTCCEEEEE-------EECTTGGGTCEEEEE
T ss_pred CC---cEEEEEccCCCCCCCEEEEEECC----CEEEEEeCCCeEEEEECCCCceeeee-------eccccCCCCceEEEE
Confidence 32 11111111 2456788999842 46777778999999998653322111 000112233567888
Q ss_pred EEecCceEEEEEec
Q 001314 231 IWLGSHLLLSVSHH 244 (1102)
Q Consensus 231 ~w~~~~~ll~~~~~ 244 (1102)
.|..++.++++...
T Consensus 414 ~~s~~~~~la~~~~ 427 (445)
T 2ovr_B 414 RASNTKLVCAVGSR 427 (445)
T ss_dssp EECSSEEEEEEECS
T ss_pred EecCCEEEEEEccc
Confidence 89888887776443
No 173
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.44 E-value=0.027 Score=67.55 Aligned_cols=178 Identities=13% Similarity=0.114 Sum_probs=104.7
Q ss_pred ceeeccC------CCeEEEEeeccCCCCCCeEEEEecCCccee----------eeecCCccccceeeeeecCCCCeEEEE
Q 001314 4 VLEWMPS------GANIAAVYDRKSENKCPSIVFYERNGLERS----------SFDINEQIDSTVELLKWNCMSDLLAAV 67 (1102)
Q Consensus 4 ~LsWrPs------GnlIA~~qr~~~~~~~~~VvFFERNGLrhg----------eF~L~~~~~~~v~~L~Wn~DS~iLAv~ 67 (1102)
.++|.|. |.+||+.. .+..|.+|+-++.... .+++.++ ...|..++|++++ .||.-
T Consensus 212 ~v~wsp~~~~~~~~~~LAs~s------~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h-~~~v~sv~~s~~~-~lasg 283 (524)
T 2j04_B 212 DLKWHEGCHAPHLVGCLSFVS------QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLA-DSLITTFDFLSPT-TVVCG 283 (524)
T ss_dssp EEEECSSCCCSSSSCEEEEEE------TTSCEEEEECCCCSSSSSEEECCCSCSEEECCT-TTCEEEEEESSSS-EEEEE
T ss_pred EEEECCCCCCCCCCceEEEEe------cCCeEEEEEcCCCccccccceeecCceEEEEcC-CCCEEEEEecCCC-eEEEE
Confidence 4789996 67999876 3568999987643211 1233332 3469999999875 66655
Q ss_pred EeeCCCCeEEEEEcccceEEEEEEEEeccCCCc-eE--EecCCCCceEEEEeeCCcEEEEEEE-----------------
Q 001314 68 VRFEEYDSVKICFFSNNHWYLKYEIRYLRRDGI-RF--MWHPTKPLQLICWTLDGQITTYNFI----------------- 127 (1102)
Q Consensus 68 ~~~~~~~~vqLWt~~NYHWYLKqei~~~~~~~~-~~--~W~~e~pl~L~i~t~~g~~~~~~~~----------------- 127 (1102)
. ....|.||+..+-. ...+.+. .....+ ++ .|++..+..|+.+..+|.+.+.+..
T Consensus 284 s---~DgtV~lWD~~~~~-~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v 358 (524)
T 2j04_B 284 F---KNGFVAEFDLTDPE-VPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNL 358 (524)
T ss_dssp E---TTSEEEEEETTBCS-SCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSC
T ss_pred e---CCCEEEEEECCCCC-CceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcc
Confidence 3 24589999997531 0111121 112233 45 4555432446766777777765531
Q ss_pred Eeeeec-CCcEEEE-EeCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecC
Q 001314 128 WTTAVM-ENSTALV-IDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLP 200 (1102)
Q Consensus 128 w~~~~~-d~~~vaV-IDG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~ 200 (1102)
+.+..+ +...++. -+.++|++-+++....+-.+. .-...|.+|+|++++. .++.--.|+++.+|+..
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~----gH~~~V~sva~Sp~g~--~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV----SRETTITAIGVSRLHP--MVLAGSADGSLIITNAA 427 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE----ECSSCEEEEECCSSCC--BCEEEETTTEEECCBSC
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECcccccceeee----cCCCceEEEEeCCCCC--eEEEEECCCEEEEEech
Confidence 112222 2223333 345578888887643221111 2456899999998653 56666789999998853
No 174
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=96.43 E-value=0.017 Score=63.76 Aligned_cols=80 Identities=13% Similarity=0.011 Sum_probs=42.0
Q ss_pred hchhHHHhhhcHHHHHHHHHHcC---CCcH----HH--------------HHHHHHHHhcchHHHHhcc-----CCcHh-
Q 001314 713 MRYTIDLRLQRFENALKHIVSMG---DSYH----AD--------------CLNLMKKYAQLFPLGLKLI-----TDPAK- 765 (1102)
Q Consensus 713 rr~~Id~~LkryekAl~hl~~~g---~~~~----de--------------Aie~~~~~~~Ly~~AL~L~-----~d~~~- 765 (1102)
....+...+|++++|+..|.++- +... .. .+..+... +.|++|++++ .+|..
T Consensus 137 ~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~~~p~~~ 215 (368)
T 1fch_A 137 ALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSD-SLFLEVKELFLAAVRLDPTSI 215 (368)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHH-HHHHHHHHHHHHHHHHSTTSC
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccHHHHHHHHHhhc-ccHHHHHHHHHHHHHhCcCcc
Confidence 33556667888888888887641 1000 00 11122244 6677777666 13321
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
...++...|..+...++|++|..+|.++
T Consensus 216 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a 243 (368)
T 1fch_A 216 DPDVQCGLGVLFNLSGEYDKAVDCFTAA 243 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 2334455566666666666666655544
No 175
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.43 E-value=0.08 Score=57.55 Aligned_cols=100 Identities=7% Similarity=-0.064 Sum_probs=59.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCe-EEEEecCC---cceee-eecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPS-IVFYERNG---LERSS-FDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~-VvFFERNG---Lrhge-F~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqL 78 (1102)
.++|.|.|+.++++... ... |..|+-+. +.... ..++ .......+.|++||..|.+.. .....|.+
T Consensus 132 ~~~~spdg~~l~~~~~~-----~~~~i~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~--~~~~~v~v 202 (331)
T 3u4y_A 132 GIAISPNGNGLILIDRS-----SANTVRRFKIDADGVLFDTGQEFIS--GGTRPFNITFTPDGNFAFVAN--LIGNSIGI 202 (331)
T ss_dssp EEEECTTSSCEEEEEET-----TTTEEEEEEECTTCCEEEEEEEEEC--SSSSEEEEEECTTSSEEEEEE--TTTTEEEE
T ss_pred ceEECCCCCEEEEEecC-----CCceEEEEEECCCCcEeecCCcccc--CCCCccceEECCCCCEEEEEe--CCCCeEEE
Confidence 58999999966665532 234 67666543 22211 1122 233578999999999877764 44568999
Q ss_pred EEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEE
Q 001314 79 CFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLIC 114 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i 114 (1102)
|....... ++..-.++.... ..+.|+|.... |++
T Consensus 203 ~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~-l~v 237 (331)
T 3u4y_A 203 LETQNPEN-ITLLNAVGTNNLPGTIVVSRDGST-VYV 237 (331)
T ss_dssp EECSSTTS-CEEEEEEECSSCCCCEEECTTSSE-EEE
T ss_pred EECCCCcc-cceeeeccCCCCCceEEECCCCCE-EEE
Confidence 99876653 111112222222 35788887654 444
No 176
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.42 E-value=0.025 Score=63.38 Aligned_cols=113 Identities=14% Similarity=0.237 Sum_probs=74.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCe-EEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPS-IVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~-VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+++|.|.|++||+.. .+.. |.+|+- +|-....|.- +.....|..++|++||..||..- ....|++|..
T Consensus 200 ~~~~s~~g~~l~s~s------~d~~~v~iwd~~~~~~~~~~~~-g~h~~~v~~~~~s~~~~~l~s~s---~d~~v~iw~~ 269 (355)
T 3vu4_A 200 MVRLNRKSDMVATCS------QDGTIIRVFKTEDGVLVREFRR-GLDRADVVDMKWSTDGSKLAVVS---DKWTLHVFEI 269 (355)
T ss_dssp EEEECTTSSEEEEEE------TTCSEEEEEETTTCCEEEEEEC-TTCCSCEEEEEECTTSCEEEEEE---TTCEEEEEES
T ss_pred EEEECCCCCEEEEEe------CCCCEEEEEECCCCcEEEEEEc-CCCCCcEEEEEECCCCCEEEEEE---CCCEEEEEEc
Confidence 589999999999986 3456 889985 4655555541 11234699999999999999875 2358999998
Q ss_pred ccceEEEEE------------------EEEeccCCC---ceEEecCCCCceEEEEeeCCcEEEEEEE
Q 001314 82 SNNHWYLKY------------------EIRYLRRDG---IRFMWHPTKPLQLICWTLDGQITTYNFI 127 (1102)
Q Consensus 82 ~NYHWYLKq------------------ei~~~~~~~---~~~~W~~e~pl~L~i~t~~g~~~~~~~~ 127 (1102)
.+..-.-+. ...++.... ..+.|++.... |++++.+|.+..|++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~-l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 270 FNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL-VVVWPHTRMIETFKVV 335 (355)
T ss_dssp SCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE-EEEETTTTEEEEEEEE
T ss_pred cCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE-EEEEeCCCeEEEEEEE
Confidence 654210000 111111111 34789987665 8888888888776554
No 177
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.38 E-value=0.083 Score=52.71 Aligned_cols=58 Identities=10% Similarity=-0.010 Sum_probs=30.8
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
+.+|...|++++|++.|.+ ++.++...+.+..........+|..+...|++.+|...+
T Consensus 73 ~~~~~~~g~~~~A~~~~~~------al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~ 130 (203)
T 3gw4_A 73 GMVERMAGNWDAARRCFLE------ERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEY 130 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH------HHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 3444555555555555433 455555443233233345566666666667777666654
No 178
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.36 E-value=0.16 Score=58.14 Aligned_cols=170 Identities=11% Similarity=0.027 Sum_probs=100.4
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
.++.|.|++|++.. .+..|.+|+-. |-....| ++ ....|..+.|++|+..|+... ....|++|...+
T Consensus 274 ~~~~~~~~~l~~~~------~d~~i~vwd~~~~~~~~~~--~~-~~~~v~~~~~~~~~~~l~sg~---~dg~i~vwd~~~ 341 (464)
T 3v7d_B 274 RTVSGHGNIVVSGS------YDNTLIVWDVAQMKCLYIL--SG-HTDRIYSTIYDHERKRCISAS---MDTTIRIWDLEN 341 (464)
T ss_dssp EEEEEETTEEEEEE------TTSCEEEEETTTTEEEEEE--CC-CSSCEEEEEEETTTTEEEEEE---TTSCEEEEETTT
T ss_pred EEEcCCCCEEEEEe------CCCeEEEEECCCCcEEEEe--cC-CCCCEEEEEEcCCCCEEEEEe---CCCcEEEEECCC
Confidence 35567888888876 35689999854 3333333 32 234699999999999999875 235799999987
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Eeee----------ecCCcEEEEEeCCeEE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTTA----------VMENSTALVIDGSKIL 147 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~~----------~~d~~~vaVIDG~~l~ 147 (1102)
.. +.+++.. .... .++.|++ -.|+.++.+|.+.+++.. +... ..+...+++-...+|.
T Consensus 342 ~~--~~~~~~~-h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~dg~i~ 415 (464)
T 3v7d_B 342 GE--LMYTLQG-HTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFN 415 (464)
T ss_dssp TE--EEEEECC-CSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEETTEEE
T ss_pred Cc--EEEEEeC-CCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEecCCeEE
Confidence 54 2233321 1223 3578874 457777788888776542 1111 1133455554455777
Q ss_pred eccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEe
Q 001314 148 VTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVD 198 (1102)
Q Consensus 148 lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~ 198 (1102)
+=.++..- +.......-..+|.+|+|+. +..+++...++...++.
T Consensus 416 iwd~~~g~---~~~~~~~~~~~~v~~v~~~~---~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 416 IYNLRSGK---LVHANILKDADQIWSVNFKG---KTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp EEETTTCC---EEESCTTTTCSEEEEEEEET---TEEEEEEEETTEEEEEE
T ss_pred EEECCCCc---EEehhhccCCCcEEEEEecC---CEEEEEEEeCCeEEEEE
Confidence 77766532 22222233467899999962 23444444455444443
No 179
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.34 E-value=0.39 Score=51.61 Aligned_cols=112 Identities=13% Similarity=0.027 Sum_probs=71.6
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCcc--ccceeeeeecCCCCeEEEEEee-----C---
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQI--DSTVELLKWNCMSDLLAAVVRF-----E--- 71 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~--~~~v~~L~Wn~DS~iLAv~~~~-----~--- 71 (1102)
..++|.|.|+.++.+.. ....|..|+.. |-....+.++.+. ...+..++|++|++.|++.... .
T Consensus 37 ~~~~~s~dg~~l~v~~~-----~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 37 MVPMVAPGGRIAYATVN-----KSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCEEECTTSSEEEEEET-----TTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEE
T ss_pred cceEEcCCCCEEEEEeC-----CCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEeccccccccccc
Confidence 46899999987766552 24689999865 4444556654311 2247789999999999887421 0
Q ss_pred -CCCeEEEEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEE
Q 001314 72 -EYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYN 125 (1102)
Q Consensus 72 -~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~ 125 (1102)
....|.+|...+... .+.+..+ .....+.|+|.... |++. +|.+..++
T Consensus 112 ~~~~~i~v~d~~~~~~--~~~~~~~-~~~~~~~~s~dg~~-l~~~--~~~i~~~d 160 (337)
T 1pby_B 112 VQPTRVALYDAETLSR--RKAFEAP-RQITMLAWARDGSK-LYGL--GRDLHVMD 160 (337)
T ss_dssp ECCCEEEEEETTTTEE--EEEEECC-SSCCCEEECTTSSC-EEEE--SSSEEEEE
T ss_pred ccCceEEEEECCCCcE--EEEEeCC-CCcceeEECCCCCE-EEEe--CCeEEEEE
Confidence 247899999987652 2333322 11235889998765 5553 56666554
No 180
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.27 E-value=0.058 Score=56.01 Aligned_cols=136 Identities=7% Similarity=-0.104 Sum_probs=88.0
Q ss_pred hchhHHHhhhcHHHHHHHHHHc---CCCcHHH---HHHHHHHHhcchHHHHhcc----C--CcHhHHHHHHHHHHHHhcc
Q 001314 713 MRYTIDLRLQRFENALKHIVSM---GDSYHAD---CLNLMKKYAQLFPLGLKLI----T--DPAKMEQVLEAWADHLSDV 780 (1102)
Q Consensus 713 rr~~Id~~LkryekAl~hl~~~---g~~~~de---Aie~~~~~~~Ly~~AL~L~----~--d~~~~~~i~~~yAd~L~~~ 780 (1102)
....+...+|+|++|+..|.++ .+....- .-.+.... +.|++|++++ . .......++..+|..+...
T Consensus 76 ~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~-g~~~~A~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 154 (252)
T 2ho1_A 76 ALAVVFQTEMEPKLADEEYRKALASDSRNARVLNNYGGFLYEQ-KRYEEAYQRLLEASQDTLYPERSRVFENLGLVSLQM 154 (252)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHH-hHHHHHHHHHHHHHhCccCcccHHHHHHHHHHHHHc
Confidence 3355666789999999988764 2222211 12223455 7889998887 2 3344566788889999999
Q ss_pred cChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 781 KCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 781 ~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
+++++|..+|.++-. +-....+|...|+|++|+....+. ...+. .......++..+...|++.+|.+.+
T Consensus 155 g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~A~~~~ 232 (252)
T 2ho1_A 155 KKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQ-NARSLLLGIRLAKVFEDRDTAASYG 232 (252)
T ss_dssp TCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCC-CHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-cHHHHHHHHHHHHHccCHHHHHHHH
Confidence 999999999988622 234446778889999997766542 11111 1234555566666666666666655
No 181
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.27 E-value=0.01 Score=69.09 Aligned_cols=110 Identities=13% Similarity=0.185 Sum_probs=68.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc-----e----eeeecCCccccceeeeeecCC-CCeEEEEEeeCCC
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE-----R----SSFDINEQIDSTVELLKWNCM-SDLLAAVVRFEEY 73 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr-----h----geF~L~~~~~~~v~~L~Wn~D-S~iLAv~~~~~~~ 73 (1102)
.++|.|.|++||..... +..+..|.+|+-+... . ..+.+-......|..++||++ +.+||... ..
T Consensus 97 ~l~~spdg~~lav~~~s--gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s---~D 171 (434)
T 2oit_A 97 HLALSCDNLTLSACMMS--SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL---AD 171 (434)
T ss_dssp EEEECTTSCEEEEEEEE--TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE---TT
T ss_pred EEEEcCCCCEEEEEEec--cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE---CC
Confidence 58999999999952100 1135689999754321 0 012221112346999999998 88999875 24
Q ss_pred CeEEEEEcccceEEEEEEEE-eccCCC-ceEEecCCCCceEEEEeeCCcEEE
Q 001314 74 DSVKICFFSNNHWYLKYEIR-YLRRDG-IRFMWHPTKPLQLICWTLDGQITT 123 (1102)
Q Consensus 74 ~~vqLWt~~NYHWYLKqei~-~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~ 123 (1102)
..|.+|+..+.. .... .+.... .++.|+|.... |++++.+|.+.+
T Consensus 172 g~v~iwD~~~~~----~~~~~~~~~~~v~~v~wspdg~~-lasgs~dg~v~i 218 (434)
T 2oit_A 172 GSIAVLQVTETV----KVCATLPSTVAVTSVCWSPKGKQ-LAVGKQNGTVVQ 218 (434)
T ss_dssp SCEEEEEESSSE----EEEEEECGGGCEEEEEECTTSSC-EEEEETTSCEEE
T ss_pred CeEEEEEcCCCc----ceeeccCCCCceeEEEEcCCCCE-EEEEcCCCcEEE
Confidence 579999998763 1222 122233 46899998544 888777776654
No 182
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=96.25 E-value=0.025 Score=62.13 Aligned_cols=86 Identities=12% Similarity=0.047 Sum_probs=40.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc------CCH
Q 001314 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC------GDV 857 (1102)
Q Consensus 784 eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl------gD~ 857 (1102)
..++.+|...|++++|+++|.+ ++.+....+. .......+..+|..+.. |+|.+|...|.+-+ ++.
T Consensus 80 ~~lg~~~~~~g~~~~A~~~~~~------Al~l~~~~g~-~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~~~ 151 (307)
T 2ifu_A 80 EQAGMMLKDLQRMPEAVQYIEK------ASVMYVENGT-PDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEERL 151 (307)
T ss_dssp HHHHHHHHHTTCGGGGHHHHHH------HHHHHHTTTC-HHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHHhCCCHHHHHHHHHH------HHHHHHHcCC-HHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCCCh
Confidence 3344455555555555555443 3333333321 11223345556666655 67666666553311 222
Q ss_pred HHH-------HHHHHHhcCHHHHHHHH
Q 001314 858 TNG-------ISLLIDARDWEEALRVA 877 (1102)
Q Consensus 858 e~A-------I~~y~~~~~W~eA~rLa 877 (1102)
..+ ..+|.+.++|++|+...
T Consensus 152 ~~~~~~~~~lg~~~~~~g~~~~A~~~~ 178 (307)
T 2ifu_A 152 RQAAELIGKASRLLVRQQKFDEAAASL 178 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 222 34556666666666543
No 183
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=96.20 E-value=0.75 Score=48.75 Aligned_cols=135 Identities=16% Similarity=0.081 Sum_probs=77.2
Q ss_pred hhHHHhhhcHHHHHHHHHHc-------CCCcHHHHH------HHHHHHhcchHHHHhcc----------CCcHhHHHHHH
Q 001314 715 YTIDLRLQRFENALKHIVSM-------GDSYHADCL------NLMKKYAQLFPLGLKLI----------TDPAKMEQVLE 771 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~-------g~~~~deAi------e~~~~~~~Ly~~AL~L~----------~d~~~~~~i~~ 771 (1102)
..+...+|+|++|+.++.++ ++ ....+. ...... +.|++|++.+ .++.....++.
T Consensus 50 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~-~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~ 127 (338)
T 3ro2_A 50 GNAYFYLHDYAKALEYHHHDLTLARTIGD-QLGEAKASGNLGNTLKVL-GNFDEAIVCCQRHLDISRELNDKVGEARALY 127 (338)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHhhcccc-cHHHHHHHHHHHHHHHHc-cCHHHHHHHHHHHHHHHHHhcCchHHHHHHH
Confidence 45555678888888877653 21 111111 112343 5666666655 23334455777
Q ss_pred HHHHHHhcccC--------------------hHHHHHHHHHcCCH--------------HHHHHHHHHcCCHHHHHHHHh
Q 001314 772 AWADHLSDVKC--------------------FEDAATTYFCCSSL--------------EKAMKAYRASGNWSGVLTVAG 817 (1102)
Q Consensus 772 ~yAd~L~~~~~--------------------~eeAa~~Y~~ag~~--------------ekAl~~y~~ag~W~~al~lA~ 817 (1102)
..|..+...++ +++|..+|.++-.. .....+|...|+|++|+....
T Consensus 128 ~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 207 (338)
T 3ro2_A 128 NLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHE 207 (338)
T ss_dssp HHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 78888888888 88887777665221 112244556667766655443
Q ss_pred h-------cCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 818 L-------LKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 818 ~-------l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
+ .+ +..........+|..+...|++.+|...+.+
T Consensus 208 ~a~~~~~~~~-~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 248 (338)
T 3ro2_A 208 QRLLIAKEFG-DKAAERRAYSNLGNAYIFLGEFETASEYYKK 248 (338)
T ss_dssp HHHHHHHHHT-CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHhcC-ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 2 11 1222333566677777777888777776644
No 184
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.19 E-value=2.5 Score=48.26 Aligned_cols=96 Identities=13% Similarity=0.024 Sum_probs=59.7
Q ss_pred CCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcccceEEEEE
Q 001314 11 GANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKY 90 (1102)
Q Consensus 11 GnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~NYHWYLKq 90 (1102)
|..||.+....+.+....|.+++-+|-....+. . ....|..++|++||..||..........|.+|+..+-.. .
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~--~-~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~---~ 216 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVH--R-SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV---R 216 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEE--E-ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE---E
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEe--C-CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE---E
Confidence 677777664321111268999998875433332 1 123689999999999999876322335899999877652 2
Q ss_pred EEEeccCCC-ceEEecCCCCceEEE
Q 001314 91 EIRYLRRDG-IRFMWHPTKPLQLIC 114 (1102)
Q Consensus 91 ei~~~~~~~-~~~~W~~e~pl~L~i 114 (1102)
.+. ..... .++.|+|.... |++
T Consensus 217 ~l~-~~~~~~~~~~~spdg~~-la~ 239 (415)
T 2hqs_A 217 QVA-SFPRHNGAPAFSPDGSK-LAF 239 (415)
T ss_dssp EEE-CCSSCEEEEEECTTSSE-EEE
T ss_pred Eee-cCCCcccCEEEcCCCCE-EEE
Confidence 222 11222 35899998765 443
No 185
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.19 E-value=0.48 Score=57.68 Aligned_cols=120 Identities=12% Similarity=0.090 Sum_probs=69.5
Q ss_pred CceeeccCCCeEEEEeecc---------------------------CCCCCCeEEEEecCCcceeeeecCCccccceeee
Q 001314 3 AVLEWMPSGANIAAVYDRK---------------------------SENKCPSIVFYERNGLERSSFDINEQIDSTVELL 55 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~---------------------------~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L 55 (1102)
..++|.|.|+.||.+.... ..+....|..|+-.+-+.-........+..+..+
T Consensus 184 ~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 263 (706)
T 2z3z_A 184 KGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNL 263 (706)
T ss_dssp CSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEE
T ss_pred ceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeE
Confidence 4789999999999886210 0012356888887664433332222233468899
Q ss_pred eecCCCCeEEEEEeeCC--CCeEEEEEcccc-eEEEEEEEEeccCCC-----ceEEecC--CCCceEEEEeeCCcEEEEE
Q 001314 56 KWNCMSDLLAAVVRFEE--YDSVKICFFSNN-HWYLKYEIRYLRRDG-----IRFMWHP--TKPLQLICWTLDGQITTYN 125 (1102)
Q Consensus 56 ~Wn~DS~iLAv~~~~~~--~~~vqLWt~~NY-HWYLKqei~~~~~~~-----~~~~W~~--e~pl~L~i~t~~g~~~~~~ 125 (1102)
.|++||+.|++...... ...|.+|...+- .+ +.+....... ..+.|+| ...+ |+....+|...++.
T Consensus 264 ~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~---~~~~~~~~~~~~~~~~~~~~sp~~dg~~-l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 264 SWSPDENILYVAEVNRAQNECKVNAYDAETGRFV---RTLFVETDKHYVEPLHPLTFLPGSNNQF-IWQSRRDGWNHLYL 339 (706)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE---EEEEEEECSSCCCCCSCCEECTTCSSEE-EEEECTTSSCEEEE
T ss_pred EEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee---eEEEEccCCCeECccCCceeecCCCCEE-EEEEccCCccEEEE
Confidence 99999999888653221 137999998876 43 1221111111 2478988 5542 44444445444444
Q ss_pred E
Q 001314 126 F 126 (1102)
Q Consensus 126 ~ 126 (1102)
+
T Consensus 340 ~ 340 (706)
T 2z3z_A 340 Y 340 (706)
T ss_dssp E
T ss_pred E
Confidence 3
No 186
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=96.18 E-value=0.38 Score=51.94 Aligned_cols=56 Identities=14% Similarity=0.089 Sum_probs=29.6
Q ss_pred HHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 789 TYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 789 ~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
+|...|++++|++.|.+ ++.++...+........++..+|..+...|+|.+|...+
T Consensus 164 ~y~~~g~~~~A~~~~~~------al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~ 219 (293)
T 3u3w_A 164 IYAENGYLKKGIDLFEQ------ILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQV 219 (293)
T ss_dssp HHHHTTCHHHHHHHHHH------HHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHH------HHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 34444444444444333 344444443334444456667777777777777776654
No 187
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=96.17 E-value=0.0049 Score=63.59 Aligned_cols=24 Identities=17% Similarity=-0.064 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
....+|..+...|++.+|...+.+
T Consensus 161 ~~~~l~~~~~~~~~~~~A~~~~~~ 184 (243)
T 2q7f_A 161 ARFQFGMCLANEGMLDEALSQFAA 184 (243)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 445556666666666666665543
No 188
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=96.11 E-value=0.13 Score=65.79 Aligned_cols=111 Identities=9% Similarity=0.098 Sum_probs=72.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce----------------e---------------------------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER----------------S--------------------------- 40 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh----------------g--------------------------- 40 (1102)
+++|.|.|.+||+.. .+..|.+|+-++.+. +
T Consensus 493 svafspdg~~LAsgs------~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 566 (902)
T 2oaj_A 493 KISFAAETLELAVSI------ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFM 566 (902)
T ss_dssp EEEEETTTTEEEEEE------TTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEE
T ss_pred EEEecCCCCeEEEEe------cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccc
Confidence 589999999999986 356888887655421 0
Q ss_pred -eeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcccceEEEEEEE-Ee--ccCCC-ceEEec-----CCCC-
Q 001314 41 -SFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSNNHWYLKYEI-RY--LRRDG-IRFMWH-----PTKP- 109 (1102)
Q Consensus 41 -eF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~NYHWYLKqei-~~--~~~~~-~~~~W~-----~e~p- 109 (1102)
--.|.+ ....|..++|++|| .||+-. ....|.||++..-.=..+..+ .+ +..+. .++.|+ |..+
T Consensus 567 ~~~~l~~-h~~~V~svafSpdG-~lAsgs---~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~ 641 (902)
T 2oaj_A 567 PSTAVHA-NKGKTSAINNSNIG-FVGIAY---AAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYS 641 (902)
T ss_dssp EEEEECC-CSCSEEEEEECBTS-EEEEEE---TTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSE
T ss_pred eeEEEEc-CCCcEEEEEecCCc-EEEEEe---CCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCc
Confidence 012222 23369999999999 999875 234799999876441111121 11 12223 358999 7764
Q ss_pred -ceEEEEeeCCcEEEEE
Q 001314 110 -LQLICWTLDGQITTYN 125 (1102)
Q Consensus 110 -l~L~i~t~~g~~~~~~ 125 (1102)
..|+.++.+|.+.+++
T Consensus 642 ~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 642 SILMVCGTDMGEVITYK 658 (902)
T ss_dssp EEEEEEEETTSEEEEEE
T ss_pred ceEEEEEecCCcEEEEE
Confidence 5688888889887643
No 189
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.11 E-value=0.022 Score=56.65 Aligned_cols=77 Identities=8% Similarity=-0.041 Sum_probs=35.1
Q ss_pred hhHHHhhhcHHHHHHHHHHc---CCCcHHHHH---HHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccCh
Q 001314 715 YTIDLRLQRFENALKHIVSM---GDSYHADCL---NLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCF 783 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~---g~~~~deAi---e~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~ 783 (1102)
+.+....|+|++|+.+|.++ .++..+--. ...... +.|++|++.+ .+|. ...++...|..+...+++
T Consensus 12 G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~-~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 89 (184)
T 3vtx_A 12 GDKKRTKGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDI-GLPNDAIESLKKFVVLDTT-SAEAYYILGSANFMIDEK 89 (184)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCCC-CHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHhcCch-hHHHHHHHHHHHHHcCCH
Confidence 44445567777777766653 222211111 112333 5566665554 1111 123344455555555555
Q ss_pred HHHHHHHHHc
Q 001314 784 EDAATTYFCC 793 (1102)
Q Consensus 784 eeAa~~Y~~a 793 (1102)
++|...|.++
T Consensus 90 ~~a~~~~~~a 99 (184)
T 3vtx_A 90 QAAIDALQRA 99 (184)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555554443
No 190
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=96.05 E-value=0.0083 Score=66.62 Aligned_cols=166 Identities=13% Similarity=-0.043 Sum_probs=82.7
Q ss_pred hhhchhHHHhhhcHHHHHHHHHHc---CCCcHH---HHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhc
Q 001314 711 LLMRYTIDLRLQRFENALKHIVSM---GDSYHA---DCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSD 779 (1102)
Q Consensus 711 ~~rr~~Id~~LkryekAl~hl~~~---g~~~~d---eAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~ 779 (1102)
.+....+....|+|++|+..|.++ .+...+ ..-...... +.|++|++.+ .+|.. ..++...|.-+..
T Consensus 68 ~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~-g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~ 145 (365)
T 4eqf_A 68 AFEEGLKRLKEGDLPVTILFMEAAILQDPGDAEAWQFLGITQAEN-ENEQAAIVALQRCLELQPNN-LKALMALAVSYTN 145 (365)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHC-CCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHc
Confidence 344455555667777777776654 221111 111112343 5666666665 12222 3455566777777
Q ss_pred ccChHHHHHHHHHcCCHHH------------------HHHHHHHcCCHHHHHHHHhhc-CCChH-HHHHHHHHHHHHHHH
Q 001314 780 VKCFEDAATTYFCCSSLEK------------------AMKAYRASGNWSGVLTVAGLL-KLGKD-EVAKLAQELCEELQA 839 (1102)
Q Consensus 780 ~~~~eeAa~~Y~~ag~~ek------------------Al~~y~~ag~W~~al~lA~~l-~~~~~-el~~l~~~lA~~L~~ 839 (1102)
.+++++|..+|.++-.... ...+|...|++++|+.+..+. ...+. ........+|..+..
T Consensus 146 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~ 225 (365)
T 4eqf_A 146 TSHQQDACEALKNWIKQNPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHL 225 (365)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHhCccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHH
Confidence 7777777777666521100 123444455555555443321 00111 012355667777777
Q ss_pred cCChHHHHHHHHHhc----CCH---HHHHHHHHHhcCHHHHHHHHH
Q 001314 840 LGKPGEAAKIALDYC----GDV---TNGISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 840 ~g~~~eAa~i~l~yl----gD~---e~AI~~y~~~~~W~eA~rLa~ 878 (1102)
.|++.+|...|.+-+ +++ -.-..+|.+.++|++|+....
T Consensus 226 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 271 (365)
T 4eqf_A 226 SGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEAYT 271 (365)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 777777777765422 121 223455666777777765543
No 191
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=96.02 E-value=0.042 Score=60.87 Aligned_cols=51 Identities=20% Similarity=0.068 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhc----CCH---HHHHHHHHHhcCHHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALDYC----GDV---TNGISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~---e~AI~~y~~~~~W~eA~rLa~ 878 (1102)
.....++..+...|++.+|...|.+.+ ++. -.-..+|.+.++|++|+....
T Consensus 248 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 305 (365)
T 4eqf_A 248 SLWNRLGATLANGDRSEEAVEAYTRALEIQPGFIRSRYNLGISCINLGAYREAVSNFL 305 (365)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 355666667777777777777664422 121 123355666677777765443
No 192
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=96.00 E-value=0.23 Score=51.90 Aligned_cols=137 Identities=11% Similarity=0.046 Sum_probs=68.3
Q ss_pred hchhHHHhhhcHHHHHHHHHHc---CC----CcHHHHHHHHHHHhcchHHHHhcc-------CCcHhHHHHHHHHHHHHh
Q 001314 713 MRYTIDLRLQRFENALKHIVSM---GD----SYHADCLNLMKKYAQLFPLGLKLI-------TDPAKMEQVLEAWADHLS 778 (1102)
Q Consensus 713 rr~~Id~~LkryekAl~hl~~~---g~----~~~deAie~~~~~~~Ly~~AL~L~-------~d~~~~~~i~~~yAd~L~ 778 (1102)
..+.+....|+|++|+..|.++ .+ .....+. ..... +.|++|++.+ .++......+...|..+.
T Consensus 8 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~~l~~-~~~~~-~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~ 85 (272)
T 3u4t_A 8 RYADFLFKNNNYAEAIEVFNKLEAKKYNSPYIYNRRAV-CYYEL-AKYDLAQKDIETYFSKVNATKAKSADFEYYGKILM 85 (272)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHTTCCCSTTHHHHHH-HHHHT-TCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHH-HHHHH-hhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHH
Confidence 3344444556666666665543 11 1122222 22333 5555555554 122222444566677777
Q ss_pred cccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHH
Q 001314 779 DVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKI 849 (1102)
Q Consensus 779 ~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i 849 (1102)
..+++++|..+|.++-. +.....+|...|+|++|+....+. ...+.. ......+|..+...+++.+|...
T Consensus 86 ~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~~~~~~~A~~~ 164 (272)
T 3u4t_A 86 KKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD-PKVFYELGQAYYYNKEYVKADSS 164 (272)
T ss_dssp HTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC-HHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777766521 122235566666677666655442 112211 23445555333344577777666
Q ss_pred HHH
Q 001314 850 ALD 852 (1102)
Q Consensus 850 ~l~ 852 (1102)
|.+
T Consensus 165 ~~~ 167 (272)
T 3u4t_A 165 FVK 167 (272)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 193
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=95.94 E-value=0.075 Score=61.78 Aligned_cols=128 Identities=11% Similarity=-0.058 Sum_probs=65.3
Q ss_pred hhhcHHHHHHHHHHcC---CCcHH----HHH------HHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhccc
Q 001314 720 RLQRFENALKHIVSMG---DSYHA----DCL------NLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVK 781 (1102)
Q Consensus 720 ~LkryekAl~hl~~~g---~~~~d----eAi------e~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~ 781 (1102)
..|+|++|+..|.++- ++..+ .+. .+.... +.|++|++.+ .+|. ...+...|..+...+
T Consensus 214 a~~~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~-~~~~~A~~~~~~~~~~~~~--~~~~~~l~~~~~~~~ 290 (537)
T 3fp2_A 214 ANDLLTKSTDMYHSLLSANTVDDPLRENAALALCYTGIFHFLK-NNLLDAQVLLQESINLHPT--PNSYIFLALTLADKE 290 (537)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCCC--HHHHHHHHHHTCCSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCcchhhHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHhcCCC--chHHHHHHHHHHHhc
Confidence 3567777777766541 11111 111 122333 5666666666 2444 455666777777777
Q ss_pred ChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 001314 782 CFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 782 ~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
+|++|..+|.++-. +-....+|...|+|++|+....+. ...+. .......+|..+...|++.+|..+|.
T Consensus 291 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~la~~~~~~g~~~~A~~~~~ 368 (537)
T 3fp2_A 291 NSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPE-NVYPYIQLACLLYKQGKFTESEAFFN 368 (537)
T ss_dssp CCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 77777777766521 112234555666666665544331 01111 01344455555666666666655553
No 194
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=95.90 E-value=0.032 Score=65.62 Aligned_cols=78 Identities=6% Similarity=-0.111 Sum_probs=51.5
Q ss_pred hhchhHHHhhhcH-HHHHHHHHHc---CCCc----HHHHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHh
Q 001314 712 LMRYTIDLRLQRF-ENALKHIVSM---GDSY----HADCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLS 778 (1102)
Q Consensus 712 ~rr~~Id~~Lkry-ekAl~hl~~~---g~~~----~deAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~ 778 (1102)
+....+...+|+| ++|+..|.++ .++. ...+.-| ... +.|++|++.| .+|. ..++..+|.-+.
T Consensus 106 ~~lg~~~~~~g~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~-~~~-g~~~~A~~~~~~al~~~p~--~~~~~~lg~~~~ 181 (474)
T 4abn_A 106 MLKGKALNVTPDYSPEAEVLLSKAVKLEPELVEAWNQLGEVY-WKK-GDVTSAHTCFSGALTHCKN--KVSLQNLSMVLR 181 (474)
T ss_dssp HHHHHHHTSSSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHH-HHH-TCHHHHHHHHHHHHTTCCC--HHHHHHHHHHHT
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHhhCCCCHHHHHHHHHHH-HHc-CCHHHHHHHHHHHHhhCCC--HHHHHHHHHHHH
Confidence 3445666678889 9999888764 3322 2223222 344 7788888877 3555 377788888888
Q ss_pred cc---------cChHHHHHHHHHc
Q 001314 779 DV---------KCFEDAATTYFCC 793 (1102)
Q Consensus 779 ~~---------~~~eeAa~~Y~~a 793 (1102)
.. ++|++|..+|.++
T Consensus 182 ~~~~~~~~~~~g~~~~A~~~~~~a 205 (474)
T 4abn_A 182 QLQTDSGDEHSRHVMDSVRQAKLA 205 (474)
T ss_dssp TCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred HhccCChhhhhhhHHHHHHHHHHH
Confidence 87 7777777777665
No 195
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=95.88 E-value=0.22 Score=49.61 Aligned_cols=20 Identities=15% Similarity=0.202 Sum_probs=12.3
Q ss_pred hhHHHhhhcHHHHHHHHHHc
Q 001314 715 YTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~ 734 (1102)
..+...+|+|++|+.++.++
T Consensus 33 ~~~~~~~g~~~~A~~~~~~a 52 (203)
T 3gw4_A 33 GYVYAFMDRFDEARASFQAL 52 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHHHH
Confidence 44555677777777665543
No 196
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.84 E-value=1.3 Score=50.52 Aligned_cols=171 Identities=10% Similarity=0.111 Sum_probs=97.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
..++.+.|++||+.. .+..|.+|+-+..+. ...+++. ...|..+.| |++.|+... ....|.+|...+
T Consensus 136 v~~~~~d~~~l~~g~------~dg~i~iwd~~~~~~-~~~~~~h-~~~v~~l~~--~~~~l~sg~---~dg~i~vwd~~~ 202 (435)
T 1p22_A 136 VYCLQYDDQKIVSGL------RDNTIKIWDKNTLEC-KRILTGH-TGSVLCLQY--DERVIITGS---SDSTVRVWDVNT 202 (435)
T ss_dssp EEEEECCSSEEEEEE------SSSCEEEEESSSCCE-EEEECCC-SSCEEEEEC--CSSEEEEEE---TTSCEEEEESSS
T ss_pred EEEEEECCCEEEEEe------CCCeEEEEeCCCCeE-EEEEcCC-CCcEEEEEE--CCCEEEEEc---CCCeEEEEECCC
Confidence 467888999999876 356888998654321 1223332 336899999 788888865 245799999887
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEEE-------eee-ec---------CCcEEEEEe-CC
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFIW-------TTA-VM---------ENSTALVID-GS 144 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~w-------~~~-~~---------d~~~vaVID-G~ 144 (1102)
..- .+.+. +.... .++.|++. .|+.++.+|.+.+++..- .+. .+ +...+++.. ..
T Consensus 203 ~~~--~~~~~-~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg 276 (435)
T 1p22_A 203 GEM--LNTLI-HHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR 276 (435)
T ss_dssp CCE--EEEEC-CCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred CcE--EEEEc-CCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCC
Confidence 652 22222 12223 45888753 577777888888766420 000 11 111222211 12
Q ss_pred eEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 145 KILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 145 ~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
+|.+-.++.. .++.... .-...|.+++|. .+.+++...++++.+|++..
T Consensus 277 ~i~vwd~~~~---~~~~~~~-~~~~~v~~~~~~----~~~l~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 277 TIKVWNTSTC---EFVRTLN-GHKRGIACLQYR----DRLVVSGSSDNTIRLWDIEC 325 (435)
T ss_dssp EEEEEETTTC---CEEEEEE-CCSSCEEEEEEE----TTEEEEEETTSCEEEEETTT
T ss_pred eEEEEECCcC---cEEEEEc-CCCCcEEEEEeC----CCEEEEEeCCCeEEEEECCC
Confidence 3334333332 1111111 134567788873 24677777899999999864
No 197
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=95.73 E-value=0.068 Score=62.20 Aligned_cols=22 Identities=23% Similarity=0.308 Sum_probs=16.6
Q ss_pred hhchhHHHhhhcHHHHHHHHHH
Q 001314 712 LMRYTIDLRLQRFENALKHIVS 733 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~ 733 (1102)
.....+...+|+|++|+..|..
T Consensus 97 ~~la~~~~~~g~~~~A~~~~~~ 118 (537)
T 3fp2_A 97 LRRASANESLGNFTDAMFDLSV 118 (537)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHH
Confidence 4456777788999999988843
No 198
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=95.70 E-value=0.048 Score=60.00 Aligned_cols=135 Identities=11% Similarity=0.016 Sum_probs=62.0
Q ss_pred hhHHHhhhcHHHHHHHHHHc---CCCcHHH---HHHHHHHHhcchHHHHhcc-----CCcHhHHHH--------------
Q 001314 715 YTIDLRLQRFENALKHIVSM---GDSYHAD---CLNLMKKYAQLFPLGLKLI-----TDPAKMEQV-------------- 769 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~---g~~~~de---Aie~~~~~~~Ly~~AL~L~-----~d~~~~~~i-------------- 769 (1102)
..+...+|+|++|+.+|.++ .++..+- .-...... +.|++|++.+ .+|......
T Consensus 105 ~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~-g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (368)
T 1fch_A 105 GTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNE-SLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGP 183 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHTSTTTGGGCC-------------
T ss_pred HHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCcCcHHHHHHHHHHhhhhcccH
Confidence 45556678888888877754 2221111 11122344 5666666655 122111100
Q ss_pred -HHHHHHHHhcccChHHHHHHHHHcCC----------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHH
Q 001314 770 -LEAWADHLSDVKCFEDAATTYFCCSS----------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEEL 837 (1102)
Q Consensus 770 -~~~yAd~L~~~~~~eeAa~~Y~~ag~----------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L 837 (1102)
....|..+ ..+++++|..+|.++-. +-....+|...|+|++|+....+. ...++ .......+|..+
T Consensus 184 ~~~~~~~~~-~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~-~~~~~~~l~~~~ 261 (368)
T 1fch_A 184 SKRILGSLL-SDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPN-DYLLWNKLGATL 261 (368)
T ss_dssp --CTTHHHH-HHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHh-hcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcC-CHHHHHHHHHHH
Confidence 01233333 55566666666555411 112234455555665555443321 11111 123445555566
Q ss_pred HHcCChHHHHHHHHH
Q 001314 838 QALGKPGEAAKIALD 852 (1102)
Q Consensus 838 ~~~g~~~eAa~i~l~ 852 (1102)
...|++.+|...|.+
T Consensus 262 ~~~g~~~~A~~~~~~ 276 (368)
T 1fch_A 262 ANGNQSEEAVAAYRR 276 (368)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHH
Confidence 666666666655533
No 199
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=95.70 E-value=0.18 Score=61.64 Aligned_cols=102 Identities=8% Similarity=-0.018 Sum_probs=63.2
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccc--cceeeeeecCCCCeEEEEEeeCC------CC
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQID--STVELLKWNCMSDLLAAVVRFEE------YD 74 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~--~~v~~L~Wn~DS~iLAv~~~~~~------~~ 74 (1102)
..++|.|.|.++++.. +..|.+|+-.+-+.... +..... ..|..++||+||..||....... ..
T Consensus 20 ~~~~~spdg~~~~~~~-------dg~i~~~d~~~g~~~~~-~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 20 PEAKWISDTEFIYREQ-------KGTVRLWNVETNTSTVL-IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCBSSSSCBCCCCS-------SSCEEEBCGGGCCCEEE-ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred cccEEcCCCcEEEEeC-------CCCEEEEECCCCcEEEE-eccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 3679999999887631 33788888765433221 222111 14899999999999998863221 15
Q ss_pred eEEEEEcccceEEEEEEEEeccCC--C-ceEEecCCCCceEEEEe
Q 001314 75 SVKICFFSNNHWYLKYEIRYLRRD--G-IRFMWHPTKPLQLICWT 116 (1102)
Q Consensus 75 ~vqLWt~~NYHWYLKqei~~~~~~--~-~~~~W~~e~pl~L~i~t 116 (1102)
.|.+|...+-.- +.+...... . ..+.|+|.... |+.+.
T Consensus 92 ~i~~~d~~~~~~---~~l~~~~~~~~~~~~~~~SPdG~~-la~~~ 132 (723)
T 1xfd_A 92 YYVLSKIPHGDP---QSLDPPEVSNAKLQYAGWGPKGQQ-LIFIF 132 (723)
T ss_dssp EEEEEESSSCCC---EECCCTTCCSCCCSBCCBCSSTTC-EEEEE
T ss_pred eEEEEECCCCce---EeccCCccccccccccEECCCCCE-EEEEE
Confidence 799999877652 233322211 1 24799997765 55533
No 200
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=95.69 E-value=0.42 Score=51.63 Aligned_cols=100 Identities=10% Similarity=0.042 Sum_probs=53.0
Q ss_pred HHHhhhcHHHHHHHHHHc---CCCcHH--HHH-------HHHHHHhcchHHHHhcc----------CCcHhHHHHHHHHH
Q 001314 717 IDLRLQRFENALKHIVSM---GDSYHA--DCL-------NLMKKYAQLFPLGLKLI----------TDPAKMEQVLEAWA 774 (1102)
Q Consensus 717 Id~~LkryekAl~hl~~~---g~~~~d--eAi-------e~~~~~~~Ly~~AL~L~----------~d~~~~~~i~~~yA 774 (1102)
.....|+|++|+..+.++ .+...+ ..+ .+.... +.|++|++.+ .++.....++...|
T Consensus 84 ~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg 162 (293)
T 2qfc_A 84 MLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKK-VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIA 162 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 334578899988887643 111110 000 111222 4666666543 12222344666777
Q ss_pred HHHhcccChHHHHHHHHHcC--------CHHHH-------HHHHHHcCCHHHHHHHHh
Q 001314 775 DHLSDVKCFEDAATTYFCCS--------SLEKA-------MKAYRASGNWSGVLTVAG 817 (1102)
Q Consensus 775 d~L~~~~~~eeAa~~Y~~ag--------~~ekA-------l~~y~~ag~W~~al~lA~ 817 (1102)
..+...++|++|..+|.+|- +.... -.+|...|+|++|+....
T Consensus 163 ~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~ 220 (293)
T 2qfc_A 163 NIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVN 220 (293)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHH
Confidence 77777777777777777653 11111 134556666776665543
No 201
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=95.64 E-value=0.02 Score=66.16 Aligned_cols=23 Identities=22% Similarity=0.359 Sum_probs=18.2
Q ss_pred hhchhHHHhhhcHHHHHHHHHHc
Q 001314 712 LMRYTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~ 734 (1102)
.....+...+|+|++|+..|.++
T Consensus 77 ~~l~~~~~~~g~~~~A~~~~~~~ 99 (514)
T 2gw1_A 77 LRRASANEGLGKFADAMFDLSVL 99 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH
Confidence 45567778899999999888765
No 202
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.61 E-value=0.68 Score=54.95 Aligned_cols=68 Identities=12% Similarity=0.100 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHH
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGE 845 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~e 845 (1102)
....+...|.-+..+|+|++|..+|. +|++.+.+ .++....++...+..||..+..+|+|++
T Consensus 350 ~a~~~~nLa~~y~~~g~~~eA~~~~~------~aL~i~~~------------~lG~~Hp~~a~~l~nLa~~~~~~G~~~e 411 (490)
T 3n71_A 350 VLRLLSIASEVLSYLQAYEEASHYAR------RMVDGYMK------------LYHHNNAQLGMAVMRAGLTNWHAGHIEV 411 (490)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHH------HHHHHHHH------------HSCTTCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHH------HHHHHHHH------------HcCCCCHHHHHHHHHHHHHHHHCCCHHH
Confidence 44566777777777888888877765 34555443 3444445666778889999989999999
Q ss_pred HHHHHH
Q 001314 846 AAKIAL 851 (1102)
Q Consensus 846 Aa~i~l 851 (1102)
|..+|.
T Consensus 412 A~~~~~ 417 (490)
T 3n71_A 412 GHGMIC 417 (490)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888763
No 203
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=95.58 E-value=0.091 Score=60.48 Aligned_cols=162 Identities=9% Similarity=-0.069 Sum_probs=94.0
Q ss_pred hchhHHHhhhcHHHHHHHHHHc---CCCcHHHH---HHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhccc
Q 001314 713 MRYTIDLRLQRFENALKHIVSM---GDSYHADC---LNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVK 781 (1102)
Q Consensus 713 rr~~Id~~LkryekAl~hl~~~---g~~~~deA---ie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~ 781 (1102)
....+....|+|++|+..|.++ .+. .+-. ....... +.|++|++.+ .+|. ...++...|..+...+
T Consensus 242 ~~~~~~~~~~~~~~A~~~~~~~l~~~~~-~~~~~~l~~~~~~~-~~~~~A~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~ 318 (514)
T 2gw1_A 242 HTGIFKFLKNDPLGAHEDIKKAIELFPR-VNSYIYMALIMADR-NDSTEYYNYFDKALKLDSN-NSSVYYHRGQMNFILQ 318 (514)
T ss_dssp HHHHHHHHSSCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHTS-SCCTTGGGHHHHHHTTCTT-CTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHhhCcc-HHHHHHHHHHHHHC-CCHHHHHHHHHHHhhcCcC-CHHHHHHHHHHHHHhC
Confidence 3445556688899998888764 222 1111 1112343 5666666665 1222 2345667788888888
Q ss_pred ChHHHHHHHHHcC-----C---HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 782 CFEDAATTYFCCS-----S---LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 782 ~~eeAa~~Y~~ag-----~---~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
++++|...|.++- + +-....+|...|+|++|+....+. ...+. .......+|..+...|++.+|...|.+
T Consensus 319 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~~ 397 (514)
T 2gw1_A 319 NYDQAGKDFDKAKELDPENIFPYIQLACLAYRENKFDDCETLFSEAKRKFPE-APEVPNFFAEILTDKNDFDKALKQYDL 397 (514)
T ss_dssp CTTHHHHHHHHHHHTCSSCSHHHHHHHHHTTTTTCHHHHHHHHHHHHHHSTT-CSHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhChhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHccc-CHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 8888888887761 1 222335566677788776665432 11111 124566777888888888888877754
Q ss_pred hcC----C---------HHHHHHHHHH---hcCHHHHHHHHH
Q 001314 853 YCG----D---------VTNGISLLID---ARDWEEALRVAF 878 (1102)
Q Consensus 853 ylg----D---------~e~AI~~y~~---~~~W~eA~rLa~ 878 (1102)
.+. + .-....+|.. .++|++|+....
T Consensus 398 a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~ 439 (514)
T 2gw1_A 398 AIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLE 439 (514)
T ss_dssp HHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHH
T ss_pred HHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHH
Confidence 221 1 1233455556 677777776544
No 204
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=95.57 E-value=0.44 Score=58.34 Aligned_cols=118 Identities=12% Similarity=0.052 Sum_probs=68.3
Q ss_pred CceeeccCCCeEEEEeeccCC---------------------------CCCCeEEEEecCC-cceeeeecCCccccceee
Q 001314 3 AVLEWMPSGANIAAVYDRKSE---------------------------NKCPSIVFYERNG-LERSSFDINEQIDSTVEL 54 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~---------------------------~~~~~VvFFERNG-LrhgeF~L~~~~~~~v~~ 54 (1102)
..++|.|.|..||.+...... +....|..++-++ -+.-....+......+..
T Consensus 212 ~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 291 (741)
T 2ecf_A 212 TGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLAR 291 (741)
T ss_dssp CSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEE
T ss_pred cceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEE
Confidence 468999999999988643100 0112566667655 333333332123346889
Q ss_pred eeecCCCCeEEEEEeeCC--CCeEEEEEcccceEEEEEEEEeccCC---C-ceEEecCCCCceEEEEeeCCcEEEE
Q 001314 55 LKWNCMSDLLAAVVRFEE--YDSVKICFFSNNHWYLKYEIRYLRRD---G-IRFMWHPTKPLQLICWTLDGQITTY 124 (1102)
Q Consensus 55 L~Wn~DS~iLAv~~~~~~--~~~vqLWt~~NYHWYLKqei~~~~~~---~-~~~~W~~e~pl~L~i~t~~g~~~~~ 124 (1102)
++| +||+.|++...... ...|.+|...+-.. ++.+...... . ..+.|+|... .++....+|...++
T Consensus 292 ~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~ 363 (741)
T 2ecf_A 292 VNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ--RVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLY 363 (741)
T ss_dssp EEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE--EEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEE
T ss_pred EEe-CCCCEEEEEEecccCCeEEEEEEECCCCce--EEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEE
Confidence 999 99999998864322 34789998877653 2322222111 1 2478988766 35554445544443
No 205
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.55 E-value=0.025 Score=58.74 Aligned_cols=51 Identities=25% Similarity=0.183 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhc----CCHH---HHHHHHHHhcCHHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALDYC----GDVT---NGISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~e---~AI~~y~~~~~W~eA~rLa~ 878 (1102)
.....+|..+...|++.+|...|.+-+ ++++ .-..+|.+.+++++|+....
T Consensus 152 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~ 209 (217)
T 2pl2_A 152 EIRSALAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAA 209 (217)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHH
Confidence 345566777777777777777664422 2222 12344556667777765443
No 206
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.53 E-value=0.21 Score=55.23 Aligned_cols=104 Identities=12% Similarity=0.005 Sum_probs=63.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCC-c-cccceeeeeecCCCCeEEEEEeeCC-CCeEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINE-Q-IDSTVELLKWNCMSDLLAAVVRFEE-YDSVKIC 79 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~-~-~~~~v~~L~Wn~DS~iLAv~~~~~~-~~~vqLW 79 (1102)
.++|.|.|.+++++... ...|..|+-+ |-..--..++. + ....+..++|++||..|++.. .. .+.|.+|
T Consensus 215 ~~~~spdg~~l~v~~~~-----~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~--~~~~~~i~v~ 287 (361)
T 3scy_A 215 HLIFNSDGKFAYLINEI-----GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN--RLKADGVAIF 287 (361)
T ss_dssp EEEECTTSSEEEEEETT-----TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE--CSSSCEEEEE
T ss_pred EEEEcCCCCEEEEEcCC-----CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC--CCCCCEEEEE
Confidence 47899999988877532 4578788754 31111111221 1 112367999999999988765 33 5789999
Q ss_pred Ecc--cceEEEEEEEEeccCCCceEEecCCCCceEEEEe
Q 001314 80 FFS--NNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWT 116 (1102)
Q Consensus 80 t~~--NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t 116 (1102)
... +-.+-..+.+.. ......+.|+|.... |++..
T Consensus 288 ~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~-l~~~~ 324 (361)
T 3scy_A 288 KVDETNGTLTKVGYQLT-GIHPRNFIITPNGKY-LLVAC 324 (361)
T ss_dssp EECTTTCCEEEEEEEEC-SSCCCEEEECTTSCE-EEEEE
T ss_pred EEcCCCCcEEEeeEecC-CCCCceEEECCCCCE-EEEEE
Confidence 985 345444444443 112245888887654 55533
No 207
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=95.49 E-value=0.074 Score=51.56 Aligned_cols=24 Identities=25% Similarity=0.127 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
....+|..+...|++.+|...+.+
T Consensus 112 ~~~~~a~~~~~~~~~~~A~~~~~~ 135 (186)
T 3as5_A 112 VRFRLGVALDNLGRFDEAIDSFKI 135 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHH
Confidence 445556666666666666665533
No 208
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=95.49 E-value=0.059 Score=56.59 Aligned_cols=102 Identities=12% Similarity=-0.032 Sum_probs=65.4
Q ss_pred hhchhHHHhhhcHHHHHHHHHHcCC-----Cc-----HHHHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHH
Q 001314 712 LMRYTIDLRLQRFENALKHIVSMGD-----SY-----HADCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADH 776 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~g~-----~~-----~deAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~ 776 (1102)
.....+...+|+|++|+..+.++-. +. ...+ ...... +.|++|++.+ .+|. ...++...|..
T Consensus 41 ~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg-~~~~~~-~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~ 117 (272)
T 3u4t_A 41 NRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYG-KILMKK-GQDSLAIQQYQAAVDRDTT-RLDMYGQIGSY 117 (272)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHH-HHHHHT-TCHHHHHHHHHHHHHHSTT-CTHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHH-HHHHHc-ccHHHHHHHHHHHHhcCcc-cHHHHHHHHHH
Confidence 3445677779999999999887521 11 1222 223455 7888888877 1332 23567788999
Q ss_pred HhcccChHHHHHHHHHcCCH---------HHHHHHHHHcCCHHHHHHHHh
Q 001314 777 LSDVKCFEDAATTYFCCSSL---------EKAMKAYRASGNWSGVLTVAG 817 (1102)
Q Consensus 777 L~~~~~~eeAa~~Y~~ag~~---------ekAl~~y~~ag~W~~al~lA~ 817 (1102)
+...++|++|..+|.++-.. ..|..+|. .++|++|+....
T Consensus 118 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~-~~~~~~A~~~~~ 166 (272)
T 3u4t_A 118 FYNKGNFPLAIQYMEKQIRPTTTDPKVFYELGQAYYY-NKEYVKADSSFV 166 (272)
T ss_dssp HHHTTCHHHHHHHHGGGCCSSCCCHHHHHHHHHHHHH-TTCHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 99999999999999887431 12223333 347877766543
No 209
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=95.42 E-value=0.089 Score=54.83 Aligned_cols=22 Identities=32% Similarity=0.498 Sum_probs=14.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHH
Q 001314 1022 LKSLVVFLVMLGEVDTARKLQD 1043 (1102)
Q Consensus 1022 v~~Ll~~Lv~~~~~e~A~~lQ~ 1043 (1102)
...|-..+...|..++|..+-+
T Consensus 255 ~~~la~~~~~~g~~~~A~~~~~ 276 (283)
T 3edt_B 255 LRSLGALYRRQGKLEAAHTLED 276 (283)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHH
Confidence 4456667777888877766533
No 210
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=95.34 E-value=0.045 Score=59.94 Aligned_cols=102 Identities=8% Similarity=-0.001 Sum_probs=57.4
Q ss_pred HHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCH---------HHHHHHHHHcCCHHH
Q 001314 746 MKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSL---------EKAMKAYRASGNWSG 811 (1102)
Q Consensus 746 ~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~---------ekAl~~y~~ag~W~~ 811 (1102)
.... +.|++|.++| .+|.....++..||.++...+++++|..+|.+|-.. ..|.-.+...|++++
T Consensus 109 ~~~~-~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~a~~~~~~~~~~~~ 187 (308)
T 2ond_A 109 EESR-MKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSV 187 (308)
T ss_dssp HHHT-TCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTHHHHHHHHHHHHTSCCHHH
T ss_pred HHhc-CCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCHHH
Confidence 3444 5566666555 233322237888888888888888888888876321 011111112355555
Q ss_pred HHHHHhh----cCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 812 VLTVAGL----LKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 812 al~lA~~----l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
|..+-.+ .+.+ ..+...++..+...|++.+|..+|.+
T Consensus 188 A~~~~~~al~~~p~~----~~~~~~~~~~~~~~g~~~~A~~~~~~ 228 (308)
T 2ond_A 188 AFKIFELGLKKYGDI----PEYVLAYIDYLSHLNEDNNTRVLFER 228 (308)
T ss_dssp HHHHHHHHHHHHTTC----HHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCc----HHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 5443322 1211 24566677777777777777777644
No 211
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.32 E-value=0.14 Score=60.90 Aligned_cols=60 Identities=7% Similarity=-0.099 Sum_probs=37.7
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHh-hcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAG-LLKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~-~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
|.+|...|++++|...|.+ |+.+.. .+|.+...+.++...++....++|+|++|+.+|..
T Consensus 400 a~~~~~~G~~~eA~~~~~~------Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~ 460 (490)
T 3n71_A 400 GLTNWHAGHIEVGHGMICK------AYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHK 460 (490)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHH------HHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555443 333322 24555556777888888888899999999998844
No 212
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=95.30 E-value=0.44 Score=58.10 Aligned_cols=78 Identities=13% Similarity=0.142 Sum_probs=53.0
Q ss_pred ceeeccCCCeEEEEeeccCC---CCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSE---NKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~---~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt 80 (1102)
.++|.|.|++||++...... .....|.+|+-.+-+...++........+..++||+||..||... ...|.+|.
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~ 140 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF----ENNIYYCA 140 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE----TTEEEEES
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE----CCeEEEEE
Confidence 58999999999998643210 012688899877654433332221223488899999999999876 35799998
Q ss_pred cccce
Q 001314 81 FSNNH 85 (1102)
Q Consensus 81 ~~NYH 85 (1102)
...-.
T Consensus 141 ~~~g~ 145 (723)
T 1xfd_A 141 HVGKQ 145 (723)
T ss_dssp SSSSC
T ss_pred CCCCc
Confidence 76543
No 213
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=95.28 E-value=0.19 Score=47.16 Aligned_cols=17 Identities=18% Similarity=0.163 Sum_probs=8.8
Q ss_pred hHHHhhhcHHHHHHHHH
Q 001314 716 TIDLRLQRFENALKHIV 732 (1102)
Q Consensus 716 ~Id~~LkryekAl~hl~ 732 (1102)
.+....|+|++|+.++.
T Consensus 17 ~~~~~~~~~~~A~~~~~ 33 (164)
T 3ro3_A 17 NTHYLLGNFRDAVIAHE 33 (164)
T ss_dssp HHHHHTTCHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHH
Confidence 33344556666665543
No 214
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=95.26 E-value=0.25 Score=49.61 Aligned_cols=110 Identities=8% Similarity=-0.208 Sum_probs=64.7
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHc-CCHHHHHHHHhhc-C--CChHHHHHHHHHHHHH
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRAS-GNWSGVLTVAGLL-K--LGKDEVAKLAQELCEE 836 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~a-g~W~~al~lA~~l-~--~~~~el~~l~~~lA~~ 836 (1102)
++...|..+...+++++|..+|.++-. +-....+|... |+|++|+....+. . ..+ ........+|..
T Consensus 44 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~l~~~ 122 (225)
T 2vq2_A 44 AWLVRAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYP-TPYIANLNKGIC 122 (225)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTCS-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHcCcCCc-chHHHHHHHHHH
Confidence 344455555556666666666655411 11222445555 6666665554332 1 122 223567788899
Q ss_pred HHHcCChHHHHHHHHHhc----CCH---HHHHHHHHHhcCHHHHHHHHHh
Q 001314 837 LQALGKPGEAAKIALDYC----GDV---TNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 837 L~~~g~~~eAa~i~l~yl----gD~---e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
+...|++.+|...+.+.+ +++ -....+|.+.++|++|+....+
T Consensus 123 ~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 172 (225)
T 2vq2_A 123 SAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKK 172 (225)
T ss_dssp HHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999998875532 222 2345678888899998876544
No 215
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=95.26 E-value=0.067 Score=51.88 Aligned_cols=82 Identities=13% Similarity=0.125 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHH
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQ 838 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~ 838 (1102)
.++..+|..+...+++++|..+|.++-. +-.-..+|...|+|++|+....+. ...++. ......+|..+.
T Consensus 77 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~ 155 (186)
T 3as5_A 77 KVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE-GKVHRAIAFSYE 155 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc-hHHHHHHHHHHH
Confidence 4555667777777778877777776521 112235566677777776655432 011111 234555555655
Q ss_pred HcCChHHHHHHH
Q 001314 839 ALGKPGEAAKIA 850 (1102)
Q Consensus 839 ~~g~~~eAa~i~ 850 (1102)
..|++.+|...+
T Consensus 156 ~~~~~~~A~~~~ 167 (186)
T 3as5_A 156 QMGRHEEALPHF 167 (186)
T ss_dssp HTTCHHHHHHHH
T ss_pred HcCCHHHHHHHH
Confidence 566666655554
No 216
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=95.19 E-value=0.38 Score=50.92 Aligned_cols=22 Identities=27% Similarity=0.427 Sum_probs=14.1
Q ss_pred HHHHHHHHHHcCCHHHHHHHHH
Q 001314 1022 LKSLVVFLVMLGEVDTARKLQD 1043 (1102)
Q Consensus 1022 v~~Ll~~Lv~~~~~e~A~~lQ~ 1043 (1102)
...|...+...|..++|...-+
T Consensus 281 ~~~la~~~~~~g~~~~A~~~~~ 302 (311)
T 3nf1_A 281 LKNLGALYRRQGKFEAAETLEE 302 (311)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHH
Confidence 3445666777788877765543
No 217
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=95.18 E-value=0.078 Score=61.93 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=85.7
Q ss_pred HHHHHHHcCCCcHHHHHHHHHHHhcchHHHHhcc--CCcHhHHHHHHHHHHHHhcccCh-------HHHHHHHHHcCCHH
Q 001314 727 ALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI--TDPAKMEQVLEAWADHLSDVKCF-------EDAATTYFCCSSLE 797 (1102)
Q Consensus 727 Al~hl~~~g~~~~deAie~~~~~~~Ly~~AL~L~--~d~~~~~~i~~~yAd~L~~~~~~-------eeAa~~Y~~ag~~e 797 (1102)
-++.+.-.|+ +++|+++..+. ++|..||=|. .+++.++.+...|...-...+.. --..++=..+|+..
T Consensus 156 ~I~~~Ll~G~--~e~Av~~al~~-~lwa~ALlLAs~~g~e~~~~V~~~y~~~~~~~~~~~~~~~~~~Lr~Ly~v~sGn~~ 232 (441)
T 3mzk_B 156 RVLAFLQTGN--HDEALRLALSK-RDYAIALLVGSLMGKDRWSEVIQKYLYEGFTAGPNDQKELAHFLLLIFQVFVGNSK 232 (441)
T ss_dssp HHHHHHHTTC--HHHHHHHHHHT-TCHHHHHHHHHTSCHHHHHHHHHHHHHCC------CTHHHHHHHHHHHHHTTTCHH
T ss_pred HHHHHHHcCC--HHHHHHHHHhC-CcHHHHHHHHHhcCHHHHHHHHHHHHHhhcccCCccccccccHHHHHHHHHcCCHH
Confidence 3444555687 89999999998 9999999998 78888988888777621111111 12245556679999
Q ss_pred HHHHHHH--------HcCCHHHHHHHHhhcCCChH--------HHHHHHHHHHHHHHHcCChHHHHHHHHHhcC
Q 001314 798 KAMKAYR--------ASGNWSGVLTVAGLLKLGKD--------EVAKLAQELCEELQALGKPGEAAKIALDYCG 855 (1102)
Q Consensus 798 kAl~~y~--------~ag~W~~al~lA~~l~~~~~--------el~~l~~~lA~~L~~~g~~~eAa~i~l~ylg 855 (1102)
.+++.+. ...+|++.+.+.-...-+.+ ...+.+..|++.|.+.|+..+|--+|+- +|
T Consensus 233 ~~V~~l~~~~~~~~~~l~~Wre~lA~IlsN~~~~~~~~~~~p~~~~~~l~~LGd~L~~~g~~~aAhiCYL~-a~ 305 (441)
T 3mzk_B 233 MAIKSFYTNNETSQWASENWKSIVAAVLINIPENNEDPLLIPPVVLEFLIEFGIFLTKKGLTAAASTLFII-GN 305 (441)
T ss_dssp HHHHHHHHCHHHHHHHHHSHHHHHHHHHHTSCCCSSCTTCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH-TT
T ss_pred HHHHHhccCCccccchHhHHHHHHHHHHhCCCCchhhcccccchHHHHHHHHHHHHHhCCCcchhHHhHhc-cC
Confidence 9998763 23489999876544321211 2356889999999999987777777653 44
No 218
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.10 E-value=3.5 Score=50.02 Aligned_cols=59 Identities=17% Similarity=0.152 Sum_probs=39.0
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecCC-----cceeeeecCCccc------------cceeeeeecCCCCeEE
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNG-----LERSSFDINEQID------------STVELLKWNCMSDLLA 65 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNG-----LrhgeF~L~~~~~------------~~v~~L~Wn~DS~iLA 65 (1102)
..++|.|.|+.||.+. +..|.+++-.+ -..-..+...... ..+..+.|++||..||
T Consensus 124 ~~~~~SpdG~~la~~~-------~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la 196 (706)
T 2z3z_A 124 ASLDFSPVGDRVAYVR-------NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLA 196 (706)
T ss_dssp TTCEECTTSSEEEEEE-------TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEE
T ss_pred cCCcCCCCCCEEEEEE-------CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEE
Confidence 3579999999999964 35788888765 2221111111110 1258899999999999
Q ss_pred EEE
Q 001314 66 AVV 68 (1102)
Q Consensus 66 v~~ 68 (1102)
+..
T Consensus 197 ~~~ 199 (706)
T 2z3z_A 197 FYR 199 (706)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 219
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=95.05 E-value=0.042 Score=56.43 Aligned_cols=136 Identities=8% Similarity=-0.061 Sum_probs=83.5
Q ss_pred hchhHHHhhhcHHHHHHHHHHc---CCCcHH---HHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhccc
Q 001314 713 MRYTIDLRLQRFENALKHIVSM---GDSYHA---DCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVK 781 (1102)
Q Consensus 713 rr~~Id~~LkryekAl~hl~~~---g~~~~d---eAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~ 781 (1102)
....+...+|+|++|+..|.++ .+.... ..-...... +.|++|++.+ .+|.. ..++..+|..+...+
T Consensus 62 ~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~-~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~~~~~ 139 (243)
T 2q7f_A 62 NFANLLSSVNELERALAFYDKALELDSSAATAYYGAGNVYVVK-EMYKEAKDMFEKALRAGMEN-GDLFYMLGTVLVKLE 139 (243)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHTCCS-HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHhc
Confidence 3355666788999999888764 222111 112223455 7888888877 12222 346677888888999
Q ss_pred ChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 001314 782 CFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 782 ~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
++++|..+|.++-. +-....+|...|+|++|+....+. ...++ .......+|..+...|++.+|...|.
T Consensus 140 ~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-~~~~~~~la~~~~~~~~~~~A~~~~~ 217 (243)
T 2q7f_A 140 QPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPG-HADAFYNAGVTYAYKENREKALEMLD 217 (243)
T ss_dssp CHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCTTHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcc-cHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 99999999988622 122335677788888887665442 11111 12355666666666777777666653
No 220
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.00 E-value=1.1 Score=48.37 Aligned_cols=101 Identities=4% Similarity=-0.127 Sum_probs=67.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.+++.|.|.++++.. ....|.+|+- +|-....+.++. ...+..++|++|+..|.+.. .....|.+|...
T Consensus 4 g~~~~~~~~~~v~~~------~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~~~v~~--~~~~~i~~~d~~ 73 (349)
T 1jmx_B 4 GPALKAGHEYMIVTN------YPNNLHVVDVASDTVYKSCVMPD--KFGPGTAMMAPDNRTAYVLN--NHYGDIYGIDLD 73 (349)
T ss_dssp CCCCCTTCEEEEEEE------TTTEEEEEETTTTEEEEEEECSS--CCSSCEEEECTTSSEEEEEE--TTTTEEEEEETT
T ss_pred cccccCCCEEEEEeC------CCCeEEEEECCCCcEEEEEecCC--CCCCceeEECCCCCEEEEEe--CCCCcEEEEeCC
Confidence 356778888888875 3568999985 455556666652 12467899999999877764 445689999988
Q ss_pred cceEEEEEEEEeccC-----C-CceEEecCCCCceEEEEee
Q 001314 83 NNHWYLKYEIRYLRR-----D-GIRFMWHPTKPLQLICWTL 117 (1102)
Q Consensus 83 NYHWYLKqei~~~~~-----~-~~~~~W~~e~pl~L~i~t~ 117 (1102)
+..- ...+..+.. . ...+.|+|.... |++...
T Consensus 74 t~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~ 111 (349)
T 1jmx_B 74 TCKN--TFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVN 111 (349)
T ss_dssp TTEE--EEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEE
T ss_pred CCcE--EEEEEcccccccccccccceEECCCCCE-EEEEcc
Confidence 7652 333443221 1 235899998765 666553
No 221
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.97 E-value=1.5 Score=47.34 Aligned_cols=76 Identities=5% Similarity=-0.053 Sum_probs=52.7
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCcc---ccceeeeeecCCCCeEEEEEee--------
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQI---DSTVELLKWNCMSDLLAAVVRF-------- 70 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~---~~~v~~L~Wn~DS~iLAv~~~~-------- 70 (1102)
..++|.|.|+.++.+.. ....|.+|+-. |-....+.++... ...+..+.|++||..|++....
T Consensus 46 ~~~~~s~dg~~~~v~~~-----~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 120 (349)
T 1jmx_B 46 GTAMMAPDNRTAYVLNN-----HYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHY 120 (349)
T ss_dssp CEEEECTTSSEEEEEET-----TTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCE
T ss_pred ceeEECCCCCEEEEEeC-----CCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccc
Confidence 35789999997666542 25689999865 4445556554311 2237889999999999988632
Q ss_pred -CCCCeEEEEEccc
Q 001314 71 -EEYDSVKICFFSN 83 (1102)
Q Consensus 71 -~~~~~vqLWt~~N 83 (1102)
.....|.+|+..+
T Consensus 121 ~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 121 VVKPPRLEVFSTAD 134 (349)
T ss_dssp EECCCEEEEEEGGG
T ss_pred ccCCCeEEEEECCC
Confidence 1136899999876
No 222
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.94 E-value=2.2 Score=48.50 Aligned_cols=169 Identities=10% Similarity=0.058 Sum_probs=95.1
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
-++.|+|++||+.. .+..|.+|+- +|-....| ++. ...|..+.|+ +++|+..- ....|.+|...+
T Consensus 123 ~~~~~~g~~l~sg~------~dg~i~vwd~~~~~~~~~~--~~h-~~~v~~~~~~--~~~l~s~~---~dg~i~vwd~~~ 188 (445)
T 2ovr_B 123 TCLQFCGNRIVSGS------DDNTLKVWSAVTGKCLRTL--VGH-TGGVWSSQMR--DNIIISGS---TDRTLKVWNAET 188 (445)
T ss_dssp EEEEEETTEEEEEE------TTSCEEEEETTTCCEEEEC--CCC-SSCEEEEEEE--TTEEEEEE---TTSCEEEEETTT
T ss_pred EEEEEcCCEEEEEE------CCCcEEEEECCCCcEEEEE--cCC-CCCEEEEEec--CCEEEEEe---CCCeEEEEECCc
Confidence 36788999999876 3568999984 44433333 332 3368899997 56777654 245799999887
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----EeeeecCCcEEEE-EeCCe---------EE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTTAVMENSTALV-IDGSK---------IL 147 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~~~~d~~~vaV-IDG~~---------l~ 147 (1102)
-.- .+.+. +.... .++.|++. .|+.++.+|.+.+++.. +....+...+.++ .||+. |.
T Consensus 189 ~~~--~~~~~-~h~~~v~~~~~~~~---~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 189 GEC--IHTLY-GHTSTVRCMHLHEK---RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVK 262 (445)
T ss_dssp TEE--EEEEC-CCSSCEEEEEEETT---EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEE
T ss_pred CcE--EEEEC-CCCCcEEEEEecCC---EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEE
Confidence 641 22222 12223 35788743 37777778888776532 1111111111111 23332 33
Q ss_pred eccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 148 VTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 148 lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+-.++.. .++ .++. -..+|.+++| + .+.+++...++++.+|++...
T Consensus 263 iwd~~~~---~~~--~~~~~~~~~v~~~~~--~--~~~l~~~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 263 VWDPETE---TCL--HTLQGHTNRVYSLQF--D--GIHVVSGSLDTSIRVWDVETG 309 (445)
T ss_dssp EEEGGGT---EEE--EEECCCSSCEEEEEE--C--SSEEEEEETTSCEEEEETTTC
T ss_pred EEECCCC---cEe--EEecCCCCceEEEEE--C--CCEEEEEeCCCeEEEEECCCC
Confidence 3222221 111 1222 3456888888 2 246777778999999998653
No 223
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.90 E-value=3.8 Score=50.21 Aligned_cols=106 Identities=7% Similarity=-0.025 Sum_probs=66.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCC-----------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEE----------- 72 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~----------- 72 (1102)
.++|.|.|++||.+.... +.+...|.+++-.|-+.-..+++. ..+..++|++||+.|+.......
T Consensus 129 ~~~~SPDg~~la~~~~~~-G~~~~~i~v~d~~tg~~~~~~~~~---~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 129 GYAFSEDGEYFAYGLSAS-GSDWVTIKFMKVDGAKELPDVLER---VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEECTTSSEEEEEEEET-TCSCEEEEEEETTTTEEEEEEEEE---ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEECCCCCEEEEEEcCC-CCceEEEEEEECCCCCCCcccccC---cccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 578999999999877653 223458888887664443333332 23678999999999998764322
Q ss_pred --CCeEEEEEcccceEEEEEEEEeccCC--C--ceEEecCCCCceEEEEe
Q 001314 73 --YDSVKICFFSNNHWYLKYEIRYLRRD--G--IRFMWHPTKPLQLICWT 116 (1102)
Q Consensus 73 --~~~vqLWt~~NYHWYLKqei~~~~~~--~--~~~~W~~e~pl~L~i~t 116 (1102)
...|.+|..+.-.. +..+.+...+ . ..+.|+|.... |++..
T Consensus 205 ~~~~~v~~~~l~t~~~--~~~~v~~~~~~~~~~~~~~~SpDg~~-l~~~~ 251 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQS--EDILCAEFPDEPKWMGGAELSDDGRY-VLLSI 251 (710)
T ss_dssp CCCCEEEEEETTSCGG--GCEEEECCTTCTTCEEEEEECTTSCE-EEEEE
T ss_pred CCCCEEEEEECCCCcc--cceEEeccCCCCeEEEEEEEcCCCCE-EEEEE
Confidence 23588998876431 1123333221 1 35788887665 55544
No 224
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=94.83 E-value=0.34 Score=50.46 Aligned_cols=71 Identities=15% Similarity=0.086 Sum_probs=35.4
Q ss_pred hhcHHHHHHHHHHcCCC----cHHHHHH------HHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccChHH
Q 001314 721 LQRFENALKHIVSMGDS----YHADCLN------LMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCFED 785 (1102)
Q Consensus 721 LkryekAl~hl~~~g~~----~~deAie------~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~ee 785 (1102)
.|+|++|+..|.++-.. ....+.- ..... +.|++|++.+ .+|.. ..++...|..+...++|++
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~~~~~~~ 95 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSL-GLRALARNDFSQALAIRPDM-PEVFNYLGIYLTQAGNFDA 95 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHTTCHHH
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHc-ccHHHHHHHHHHHHHcCCCc-HHHHHHHHHHHHHccCHHH
Confidence 47788888877765321 1111111 12344 6677777666 12221 2344445555555555555
Q ss_pred HHHHHHHc
Q 001314 786 AATTYFCC 793 (1102)
Q Consensus 786 Aa~~Y~~a 793 (1102)
|..+|.++
T Consensus 96 A~~~~~~a 103 (275)
T 1xnf_A 96 AYEAFDSV 103 (275)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555443
No 225
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=94.76 E-value=0.58 Score=60.34 Aligned_cols=101 Identities=5% Similarity=-0.012 Sum_probs=63.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeC-------CCCeE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFE-------EYDSV 76 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~-------~~~~v 76 (1102)
.++|.|.|.+||+.. .+.+|.+|+-.+-+.-.. ++. ....|..++|++||..||...... ....|
T Consensus 383 ~~~~SpDG~~la~~~------~~~~v~~~d~~tg~~~~~-~~~-~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 383 AMGVDRNGKFAVVAN------DRFEIMTVDLETGKPTVI-ERS-REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp EEEECTTSSEEEEEE------TTSEEEEEETTTCCEEEE-EEC-SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred eeEECCCCCEEEEEC------CCCeEEEEECCCCceEEe-ccC-CCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 589999999999876 345888998754322221 111 223578899999999998876432 12489
Q ss_pred EEEEcccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEee
Q 001314 77 KICFFSNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTL 117 (1102)
Q Consensus 77 qLWt~~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~ 117 (1102)
.+|...+-. ...+. ..... ..+.|+|.... |+..+.
T Consensus 455 ~l~d~~~g~---~~~l~-~~~~~~~~~~~spdG~~-l~~~s~ 491 (1045)
T 1k32_A 455 HVYDMEGRK---IFAAT-TENSHDYAPAFDADSKN-LYYLSY 491 (1045)
T ss_dssp EEEETTTTE---EEECS-CSSSBEEEEEECTTSCE-EEEEES
T ss_pred EEEECCCCc---EEEee-CCCcccCCceEcCCCCE-EEEEec
Confidence 999988754 11121 11122 34789987765 555444
No 226
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=94.73 E-value=0.12 Score=51.07 Aligned_cols=108 Identities=12% Similarity=-0.053 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHH
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQ 838 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~ 838 (1102)
.++...|.-+...+++++|...|.++-. +...-.++...++|+.+.....+. ...+.. ......+|..+.
T Consensus 40 ~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~-~~~~~~lg~~~~ 118 (184)
T 3vtx_A 40 ETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVY-ADAYYKLGLVYD 118 (184)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-hHHHHHHHHHHH
Confidence 4566678878888888888887777621 112224455666777665544331 111111 235566777777
Q ss_pred HcCChHHHHHHHHHhc----CCHH---HHHHHHHHhcCHHHHHHH
Q 001314 839 ALGKPGEAAKIALDYC----GDVT---NGISLLIDARDWEEALRV 876 (1102)
Q Consensus 839 ~~g~~~eAa~i~l~yl----gD~e---~AI~~y~~~~~W~eA~rL 876 (1102)
..|+|.+|...|.+.+ ++++ .-..+|.+.++|++|+..
T Consensus 119 ~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~ 163 (184)
T 3vtx_A 119 SMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKY 163 (184)
T ss_dssp HTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHH
Confidence 7777777777764422 1211 123445555666666543
No 227
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.51 E-value=0.94 Score=54.19 Aligned_cols=159 Identities=8% Similarity=0.035 Sum_probs=93.7
Q ss_pred eeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc--c
Q 001314 6 EWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF--S 82 (1102)
Q Consensus 6 sWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~--~ 82 (1102)
++.|.|.++++.. ....|.+|+- .|-..+.|.... .+..+.+++||..|++.- . .+.|.+|.. .
T Consensus 144 ~~~p~~~~~vs~~------~d~~V~v~D~~t~~~~~~i~~g~----~~~~v~~spdg~~l~v~~--~-d~~V~v~D~~~~ 210 (543)
T 1nir_A 144 DLDLPNLFSVTLR------DAGQIALVDGDSKKIVKVIDTGY----AVHISRMSASGRYLLVIG--R-DARIDMIDLWAK 210 (543)
T ss_dssp CCCGGGEEEEEEG------GGTEEEEEETTTCCEEEEEECST----TEEEEEECTTSCEEEEEE--T-TSEEEEEETTSS
T ss_pred ccCCCCEEEEEEc------CCCeEEEEECCCceEEEEEecCc----ccceEEECCCCCEEEEEC--C-CCeEEEEECcCC
Confidence 4667787777754 2468888874 454555554432 377899999999999975 2 289999999 5
Q ss_pred cceEEEEEEEEeccCCCceEEecC----CCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCCC
Q 001314 83 NNHWYLKYEIRYLRRDGIRFMWHP----TKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPP 158 (1102)
Q Consensus 83 NYHWYLKqei~~~~~~~~~~~W~~----e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPP 158 (1102)
+.. ...++..+ ...-.+.|+| .... |+++. ..++.|.|+|+.+.... +. +|-
T Consensus 211 t~~--~~~~i~~g-~~p~~va~sp~~~~dg~~-l~v~~----------------~~~~~v~v~D~~t~~~~--~~--i~~ 266 (543)
T 1nir_A 211 EPT--KVAEIKIG-IEARSVESSKFKGYEDRY-TIAGA----------------YWPPQFAIMDGETLEPK--QI--VST 266 (543)
T ss_dssp SCE--EEEEEECC-SEEEEEEECCSTTCTTTE-EEEEE----------------EESSEEEEEETTTCCEE--EE--EEC
T ss_pred CCc--EEEEEecC-CCcceEEeCCCcCCCCCE-EEEEE----------------ccCCeEEEEeccccccc--ee--ecc
Confidence 544 23444421 1113467777 4433 44422 12567888887764322 11 221
Q ss_pred -cccccc--cccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 159 -PMYLFS--LKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 159 -PM~~~~--l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
+|.... ..-...+..|+|++++.. .++....++++.++...+.
T Consensus 267 ~g~~~~~~~~~~~~~v~~i~~s~~~~~-~~vs~~~~g~i~vvd~~~~ 312 (543)
T 1nir_A 267 RGMTVDTQTYHPEPRVAAIIASHEHPE-FIVNVKETGKVLLVNYKDI 312 (543)
T ss_dssp CEECSSSCCEESCCCEEEEEECSSSSE-EEEEETTTTEEEEEECTTS
T ss_pred cCcccCccccccCCceEEEEECCCCCE-EEEEECCCCeEEEEEecCC
Confidence 221111 111236778999886543 3444456788999887543
No 228
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=94.48 E-value=0.21 Score=52.71 Aligned_cols=23 Identities=9% Similarity=0.138 Sum_probs=13.8
Q ss_pred hhchhHHHhhhcHHHHHHHHHHc
Q 001314 712 LMRYTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~ 734 (1102)
+....+....|+|++|+..|.++
T Consensus 19 ~~~a~~~~~~g~~~~A~~~~~~~ 41 (261)
T 3qky_A 19 FERAMEFYNQGKYDRAIEYFKAV 41 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHH
Confidence 34445555566777777766654
No 229
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.39 E-value=4 Score=46.25 Aligned_cols=168 Identities=14% Similarity=0.100 Sum_probs=91.9
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
++| .|++||+.. .+..|.+|+ ++|-....|. . ....|..+.|+. +.|+... ....|.+|+..+
T Consensus 179 l~~--~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~--~-h~~~v~~l~~~~--~~l~s~s---~dg~i~vwd~~~ 242 (435)
T 1p22_A 179 LQY--DERVIITGS------SDSTVRVWDVNTGEMLNTLI--H-HCEAVLHLRFNN--GMMVTCS---KDRSIAVWDMAS 242 (435)
T ss_dssp EEC--CSSEEEEEE------TTSCEEEEESSSCCEEEEEC--C-CCSCEEEEECCT--TEEEEEE---TTSCEEEEECSS
T ss_pred EEE--CCCEEEEEc------CCCeEEEEECCCCcEEEEEc--C-CCCcEEEEEEcC--CEEEEee---CCCcEEEEeCCC
Confidence 455 788888876 356788888 4454433332 2 233699999974 4666553 345799999876
Q ss_pred ceEE-EEEEEEeccCCC-ceEEecCCCCceEEEEeeCCcEEEEEEE-----Eeeeec---------CCcEEEEE-eCCeE
Q 001314 84 NHWY-LKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDGQITTYNFI-----WTTAVM---------ENSTALVI-DGSKI 146 (1102)
Q Consensus 84 YHWY-LKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----w~~~~~---------d~~~vaVI-DG~~l 146 (1102)
..-. +.+.+ .+.... .++.|+. ..|+.++.+|.+.+++.. .....+ +...+++. ...+|
T Consensus 243 ~~~~~~~~~~-~~~~~~v~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i 318 (435)
T 1p22_A 243 PTDITLRRVL-VGHRAAVNVVDFDD---KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTI 318 (435)
T ss_dssp SSCCEEEEEE-CCCSSCEEEEEEET---TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCE
T ss_pred CCCceeeeEe-cCCCCcEEEEEeCC---CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeE
Confidence 5421 11222 222223 3577843 347777777877765532 111111 11222221 12234
Q ss_pred EeccCCCCCCCCcccccccc-cCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 147 LVTPLSLSLMPPPMYLFSLK-FPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 147 ~lTp~r~a~VPPPM~~~~l~-~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
.+-.++.. .++ ..+. -...|.+++| + .+.+++...+|++.+|++..
T Consensus 319 ~iwd~~~~---~~~--~~~~~h~~~v~~~~~--~--~~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 319 RLWDIECG---ACL--RVLEGHEELVRCIRF--D--NKRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp EEEETTTC---CEE--EEECCCSSCEEEEEC--C--SSEEEEEETTSCEEEEEHHH
T ss_pred EEEECCCC---CEE--EEEeCCcCcEEEEEe--c--CCEEEEEeCCCcEEEEECCC
Confidence 44444432 111 1121 3457888888 2 24677778899999999743
No 230
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=94.32 E-value=0.8 Score=42.75 Aligned_cols=57 Identities=21% Similarity=0.227 Sum_probs=28.5
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
+.+|...|++++|++.|.+ ++.++...+ +..........+|..+...|++.+|...+
T Consensus 56 ~~~~~~~g~~~~A~~~~~~------a~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 112 (164)
T 3ro3_A 56 GNAYIFLGEFETASEYYKK------TLLLARQLK-DRAVEAQSCYSLGNTYTLLQDYEKAIDYH 112 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHHHHHTT-CHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH------HHHHHHHhC-CcHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 4444455555555555433 344444332 22222345555666666666666666554
No 231
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=94.28 E-value=0.078 Score=66.12 Aligned_cols=132 Identities=14% Similarity=0.101 Sum_probs=62.6
Q ss_pred hHHHhhhcHHHHHHHHHHc---CCCcH----HHHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccCh
Q 001314 716 TIDLRLQRFENALKHIVSM---GDSYH----ADCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCF 783 (1102)
Q Consensus 716 ~Id~~LkryekAl~hl~~~---g~~~~----deAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~ 783 (1102)
.+...+|+|++|+..|.++ .++.. ..+.- +.+. +.|++|++.| .+|+. ..++...|.-|...+++
T Consensus 17 ~~~~~~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~-l~~~-g~~~eA~~~~~~Al~l~P~~-~~a~~nLg~~l~~~g~~ 93 (723)
T 4gyw_A 17 NIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASV-LQQQ-GKLQEALMHYKEAIRISPTF-ADAYSNMGNTLKEMQDV 93 (723)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHH-HHHT-TCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHc-CCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCCH
Confidence 4444566666666666543 22111 11211 2233 4555555554 13322 23455566666666666
Q ss_pred HHHHHHHHHcC----CHHHH----HHHHHHcCCHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 001314 784 EDAATTYFCCS----SLEKA----MKAYRASGNWSGVLTVAGL-LKLGKDEVAKLAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 784 eeAa~~Y~~ag----~~ekA----l~~y~~ag~W~~al~lA~~-l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
++|...|.+|- ++..| -.+|...|++++|+...++ +.+.++ .......+|..+...|++.+|.+.|.
T Consensus 94 ~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~-~~~a~~~L~~~l~~~g~~~~A~~~~~ 169 (723)
T 4gyw_A 94 QGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPD-FPDAYCNLAHCLQIVCDWTDYDERMK 169 (723)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSC-CHHHHHHHHHHHHHTTCCTTHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-ChHHHhhhhhHHHhcccHHHHHHHHH
Confidence 66666665541 11111 1344455555555443322 111111 12355666667777777777666553
No 232
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=94.19 E-value=0.51 Score=48.37 Aligned_cols=24 Identities=13% Similarity=0.015 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.+..++..+...|++.+|...|.+
T Consensus 119 ~~~~~g~~~~~~~~~~~A~~~~~~ 142 (228)
T 4i17_A 119 YYLKEGQKFQQAGNIEKAEENYKH 142 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhHHHHHhccHHHHHHHHHH
Confidence 344555555555666666555544
No 233
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=94.18 E-value=0.11 Score=64.85 Aligned_cols=133 Identities=15% Similarity=0.140 Sum_probs=87.9
Q ss_pred HHHcCCCcHHHHHHHHHHHhcchHHHHhccCCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcC----CHHHHH----HH
Q 001314 731 IVSMGDSYHADCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCS----SLEKAM----KA 802 (1102)
Q Consensus 731 l~~~g~~~~deAie~~~~~~~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag----~~ekAl----~~ 802 (1102)
+.+.|. +++|++ .|++|+++. |+ ....+..+|.-|...|++++|..+|.+|= ++..|. .+
T Consensus 19 ~~~~G~--~~eAi~-------~~~kAl~l~--P~-~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~ 86 (723)
T 4gyw_A 19 KREQGN--IEEAVR-------LYRKALEVF--PE-FAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNT 86 (723)
T ss_dssp HHHTTC--HHHHHH-------HHHHHHHHC--SC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred HHHcCC--HHHHHH-------HHHHHHHhC--CC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 345565 788774 455566664 22 23456678999999999999999998872 222232 56
Q ss_pred HHHcCCHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc----CCHH---HHHHHHHHhcCHHHHH
Q 001314 803 YRASGNWSGVLTVAGL-LKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC----GDVT---NGISLLIDARDWEEAL 874 (1102)
Q Consensus 803 y~~ag~W~~al~lA~~-l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~e---~AI~~y~~~~~W~eA~ 874 (1102)
|...|+|++|+...++ +.+.++ ..+....+|..+.+.|++++|...|.+-+ ++.+ .-..+|...++|++|.
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P~-~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~~~a~~~L~~~l~~~g~~~~A~ 165 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINPA-FADAHSNLASIHKDSGNIPEAIASYRTALKLKPDFPDAYCNLAHCLQIVCDWTDYD 165 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCTTHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHhhhhhHHHhcccHHHHH
Confidence 7788888888765443 112222 23567889999999999999999885532 2222 2345677788888886
Q ss_pred HH
Q 001314 875 RV 876 (1102)
Q Consensus 875 rL 876 (1102)
..
T Consensus 166 ~~ 167 (723)
T 4gyw_A 166 ER 167 (723)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 234
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=94.15 E-value=0.12 Score=53.55 Aligned_cols=50 Identities=16% Similarity=0.033 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhc---CCHH---HHHHHHHHhcCHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALDYC---GDVT---NGISLLIDARDWEEALRVA 877 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~yl---gD~e---~AI~~y~~~~~W~eA~rLa 877 (1102)
.....+|..+...|++.+|...|.+-+ ++++ .-..+|...++|++|+...
T Consensus 119 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 174 (217)
T 2pl2_A 119 PLHLQRGLVYALLGERDKAEASLKQALALEDTPEIRSALAELYLSMGRLDEALAQY 174 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcccchHHHHHHHHHHHHcCCHHHHHHHH
Confidence 456678888888899998888774421 2222 2234566667777776543
No 235
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=94.13 E-value=0.5 Score=52.77 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=47.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC---Ccc---eeee-ecCCcc-c-c-------ceeeee-ecCCCCeEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN---GLE---RSSF-DINEQI-D-S-------TVELLK-WNCMSDLLAA 66 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN---GLr---hgeF-~L~~~~-~-~-------~v~~L~-Wn~DS~iLAv 66 (1102)
.++|.|.|.+++++.. ....|..|..+ |-. ...+ .+|... . . .+..++ |++||..|.+
T Consensus 197 ~~~~spdg~~l~v~~~-----~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 197 WVAMHPTGNYLYALME-----AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp EEEECTTSSEEEEEET-----TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred EeEECCCCCEEEEEEC-----CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 3789999998887752 23577777543 532 1222 233211 1 1 488999 9999999987
Q ss_pred EEeeCCC---CeEEEEEcc
Q 001314 67 VVRFEEY---DSVKICFFS 82 (1102)
Q Consensus 67 ~~~~~~~---~~vqLWt~~ 82 (1102)
..+.... +.|++|...
T Consensus 272 ~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 272 SSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEESSTTSCCEEEEEEEC
T ss_pred ECCCCCCCCCCeEEEEEEC
Confidence 6543221 289999875
No 236
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=94.03 E-value=0.32 Score=57.88 Aligned_cols=82 Identities=5% Similarity=0.026 Sum_probs=61.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHhhc---CCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcCC--------HHHHHHHH
Q 001314 796 LEKAMKAYRASGNWSGVLTVAGLL---KLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGD--------VTNGISLL 864 (1102)
Q Consensus 796 ~ekAl~~y~~ag~W~~al~lA~~l---~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylgD--------~e~AI~~y 864 (1102)
|.-.+.+|.++|++++|+.+-..+ +..++. ..+..+...+...|+.++|.+++.+.... +...|..|
T Consensus 108 yn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~--~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~ 185 (501)
T 4g26_A 108 FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRL--RSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVS 185 (501)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcc--ceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 556778888888888887766543 333322 35778888888999999999998765432 67789999
Q ss_pred HHhcCHHHHHHHHHh
Q 001314 865 IDARDWEEALRVAFM 879 (1102)
Q Consensus 865 ~~~~~W~eA~rLa~~ 879 (1102)
++++++++|+++..+
T Consensus 186 ~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 186 MDTKNADKVYKTLQR 200 (501)
T ss_dssp HHTTCHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHH
Confidence 999999999987654
No 237
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.01 E-value=1.6 Score=46.74 Aligned_cols=73 Identities=14% Similarity=0.231 Sum_probs=50.4
Q ss_pred ceeeccCCCeEEEEeecc----CCC--CCCeEEEEecCCcce-eeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeE
Q 001314 4 VLEWMPSGANIAAVYDRK----SEN--KCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSV 76 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~----~~~--~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~v 76 (1102)
.++|.|.|+.++++.... +.. ....|.+|+-.+.+. ..+..+ ..+..+.|++|+..|++. ...|
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~-----~~~i 156 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP----RQITMLAWARDGSKLYGL-----GRDL 156 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC----SSCCCEEECTTSSCEEEE-----SSSE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC----CCcceeEECCCCCEEEEe-----CCeE
Confidence 589999999888875210 000 136889998765433 333332 247789999999988876 3569
Q ss_pred EEEEcccce
Q 001314 77 KICFFSNNH 85 (1102)
Q Consensus 77 qLWt~~NYH 85 (1102)
.+|...+..
T Consensus 157 ~~~d~~~~~ 165 (337)
T 1pby_B 157 HVMDPEAGT 165 (337)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCc
Confidence 999998765
No 238
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=93.98 E-value=0.5 Score=44.54 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=26.3
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKI 849 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i 849 (1102)
+.+|...|++++|++.|.+ ++.+..........+...+..+|..+...|+|.+|...
T Consensus 49 g~~~~~~~~~~~A~~~~~~------al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~ 105 (127)
T 4gcn_A 49 AAVYFEEKKFAECVQFCEK------AVEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQW 105 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHH------HHHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3445555666666665443 44444333222222233444455554444444444443
No 239
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=93.95 E-value=1.1 Score=46.31 Aligned_cols=47 Identities=13% Similarity=0.073 Sum_probs=28.1
Q ss_pred hhchhHHHhhhcHHHHHHHHHHcC---CC-------cHHHHHHHHHHHhcchHHHHhcc
Q 001314 712 LMRYTIDLRLQRFENALKHIVSMG---DS-------YHADCLNLMKKYAQLFPLGLKLI 760 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~g---~~-------~~deAie~~~~~~~Ly~~AL~L~ 760 (1102)
+.+.......|+|++|+..|.++- +. .+..+.-+ .+. +.|++|++.|
T Consensus 8 ~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~-~~~-~~~~~A~~~~ 64 (225)
T 2yhc_A 8 YATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAY-YKN-ADLPLAQAAI 64 (225)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHH-HHT-TCHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHH-Hhc-CCHHHHHHHH
Confidence 445556666889999998888641 11 12223233 344 6778877766
No 240
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=93.91 E-value=0.88 Score=55.56 Aligned_cols=74 Identities=12% Similarity=0.124 Sum_probs=50.1
Q ss_pred CceeeccCCCeEEEEeeccCC---CCCCeEEEEecCCcce-eeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEE
Q 001314 3 AVLEWMPSGANIAAVYDRKSE---NKCPSIVFYERNGLER-SSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~---~~~~~VvFFERNGLrh-geF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqL 78 (1102)
..++|.|.|++||.+...... .....|.+++-.|-+- ....++ ..+..++||+||..||..- ...|.+
T Consensus 63 ~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~----~~~~~~~~SPDG~~la~~~----~~~i~~ 134 (719)
T 1z68_A 63 SNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP----RPIQYLCWSPVGSKLAYVY----QNNIYL 134 (719)
T ss_dssp SEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC----SSBCCEEECSSTTCEEEEE----TTEEEE
T ss_pred eeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC----cccccceECCCCCEEEEEE----CCeEEE
Confidence 358899999999987642100 0135788888766433 001222 2478899999999999874 458999
Q ss_pred EEcccc
Q 001314 79 CFFSNN 84 (1102)
Q Consensus 79 Wt~~NY 84 (1102)
|....-
T Consensus 135 ~~~~~g 140 (719)
T 1z68_A 135 KQRPGD 140 (719)
T ss_dssp ESSTTS
T ss_pred EeCCCC
Confidence 987553
No 241
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=93.83 E-value=2 Score=55.30 Aligned_cols=98 Identities=7% Similarity=-0.081 Sum_probs=60.2
Q ss_pred ceeec-cCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEE-EEEc
Q 001314 4 VLEWM-PSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVK-ICFF 81 (1102)
Q Consensus 4 ~LsWr-PsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vq-LWt~ 81 (1102)
.++|. |.|..||... +..|..+.-.+-.... +.......+..+.|+ ||..|+... + ...|. +|..
T Consensus 300 ~~~~S~pdG~~la~~~-------~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~s-dg~~l~~~s--~-~~~l~~~~d~ 366 (1045)
T 1k32_A 300 AEDFSPLDGDLIAFVS-------RGQAFIQDVSGTYVLK--VPEPLRIRYVRRGGD-TKVAFIHGT--R-EGDFLGIYDY 366 (1045)
T ss_dssp EEEEEECGGGCEEEEE-------TTEEEEECTTSSBEEE--CSCCSCEEEEEECSS-SEEEEEEEE--T-TEEEEEEEET
T ss_pred eeeecCCCCCEEEEEE-------cCEEEEEcCCCCceEE--ccCCCcceEEeeeEc-CCCeEEEEE--C-CCceEEEEEC
Confidence 58999 9999999876 2477778766544322 232233368899999 999999875 2 34566 7776
Q ss_pred ccceEEEEEEEEeccCCC-ceEEecCCCCceEEEEeeCC
Q 001314 82 SNNHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWTLDG 119 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t~~g 119 (1102)
..-. ...+. +.... ..+.|+|.... |++....+
T Consensus 367 ~~~~---~~~l~-~~~~~~~~~~~SpDG~~-la~~~~~~ 400 (1045)
T 1k32_A 367 RTGK---AEKFE-ENLGNVFAMGVDRNGKF-AVVANDRF 400 (1045)
T ss_dssp TTCC---EEECC-CCCCSEEEEEECTTSSE-EEEEETTS
T ss_pred CCCC---ceEec-CCccceeeeEECCCCCE-EEEECCCC
Confidence 5533 11222 21122 34788887655 55544444
No 242
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=93.80 E-value=2.6 Score=49.44 Aligned_cols=98 Identities=10% Similarity=-0.021 Sum_probs=49.8
Q ss_pred chHHHHhccCCcHhHHHHHHHHHHHHhc-------ccChH-------HHHHHHHHcCC---H------HHHHHHHHHcCC
Q 001314 752 LFPLGLKLITDPAKMEQVLEAWADHLSD-------VKCFE-------DAATTYFCCSS---L------EKAMKAYRASGN 808 (1102)
Q Consensus 752 Ly~~AL~L~~d~~~~~~i~~~yAd~L~~-------~~~~e-------eAa~~Y~~ag~---~------ekAl~~y~~ag~ 808 (1102)
+|++|++... ....++..||.++.. .|+++ +|..+|.+|=. + -.....+...|+
T Consensus 260 ~y~~al~~~p---~~~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g~ 336 (530)
T 2ooe_A 260 AYEQCLLVLG---HHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMK 336 (530)
T ss_dssp HHHHHHHHHT---TCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCC---CCHHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCC
Confidence 4666665541 124667778888775 57776 66666666632 1 122234445566
Q ss_pred HHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 809 WSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 809 W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
+++|..+-.+. ..++.....+...++..+...|++.+|..+|.+
T Consensus 337 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 381 (530)
T 2ooe_A 337 YEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 381 (530)
T ss_dssp HHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 66665443321 111111112444555555555666666655544
No 243
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.77 E-value=1.4 Score=52.69 Aligned_cols=162 Identities=11% Similarity=0.012 Sum_probs=96.0
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEec---CCcceeeeecCCccccceeeeeecC----CCCeEEEEEeeCCCCe
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYER---NGLERSSFDINEQIDSTVELLKWNC----MSDLLAAVVRFEEYDS 75 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER---NGLrhgeF~L~~~~~~~v~~L~Wn~----DS~iLAv~~~~~~~~~ 75 (1102)
+.+++.|.|.+++++.+ ...|.+|+- .|-...++ +. ...+..+++++ ||..|++... ....
T Consensus 182 ~~v~~spdg~~l~v~~~------d~~V~v~D~~~~t~~~~~~i--~~--g~~p~~va~sp~~~~dg~~l~v~~~--~~~~ 249 (543)
T 1nir_A 182 HISRMSASGRYLLVIGR------DARIDMIDLWAKEPTKVAEI--KI--GIEARSVESSKFKGYEDRYTIAGAY--WPPQ 249 (543)
T ss_dssp EEEEECTTSCEEEEEET------TSEEEEEETTSSSCEEEEEE--EC--CSEEEEEEECCSTTCTTTEEEEEEE--ESSE
T ss_pred ceEEECCCCCEEEEECC------CCeEEEEECcCCCCcEEEEE--ec--CCCcceEEeCCCcCCCCCEEEEEEc--cCCe
Confidence 35779999999999863 368999997 33333333 32 33578999999 9999998753 2467
Q ss_pred EEEEEcccceEEEEEEEEeccCCCceEEecCCC-CceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCe---EEeccC
Q 001314 76 VKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTK-PLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSK---ILVTPL 151 (1102)
Q Consensus 76 vqLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~-pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~---l~lTp~ 151 (1102)
|.+|+..... +.+.+.......-...||++. +..+.+ +..|.... ++..+++.|.|+|-.+ +.+|.+
T Consensus 250 v~v~D~~t~~--~~~~i~~~g~~~~~~~~~~~~~v~~i~~-s~~~~~~~------vs~~~~g~i~vvd~~~~~~l~~~~i 320 (543)
T 1nir_A 250 FAIMDGETLE--PKQIVSTRGMTVDTQTYHPEPRVAAIIA-SHEHPEFI------VNVKETGKVLLVNYKDIDNLTVTSI 320 (543)
T ss_dssp EEEEETTTCC--EEEEEECCEECSSSCCEESCCCEEEEEE-CSSSSEEE------EEETTTTEEEEEECTTSSSCEEEEE
T ss_pred EEEEeccccc--cceeecccCcccCccccccCCceEEEEE-CCCCCEEE------EEECCCCeEEEEEecCCCcceeEEe
Confidence 9999987755 345554321110012355552 222222 33343321 3345778888888553 333322
Q ss_pred CCCCCCCcccccccccCCceeEEEEecCCCCceEE-EEEeCCceEEEecCC
Q 001314 152 SLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLA-AILSDGCLCVVDLPA 201 (1102)
Q Consensus 152 r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a-~vl~~~~l~l~~~~~ 201 (1102)
.....+.+++|++++. .+. +-..++++.+|+..+
T Consensus 321 --------------~~~~~~~~~~~spdg~--~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 321 --------------GAAPFLHDGGWDSSHR--YFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp --------------ECCSSCCCEEECTTSC--EEEEEEGGGTEEEEEETTT
T ss_pred --------------ccCcCccCceECCCCC--EEEEEecCCCeEEEEECCC
Confidence 1233456889988754 232 223467899987643
No 244
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=93.59 E-value=1.3 Score=51.04 Aligned_cols=178 Identities=14% Similarity=0.079 Sum_probs=98.3
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce------eeeecC--CccccceeeeeecCCCCeEEEEEeeCCCC
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER------SSFDIN--EQIDSTVELLKWNCMSDLLAAVVRFEEYD 74 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh------geF~L~--~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~ 74 (1102)
..|+|.|.+.++|+.. + ..++.+.-.-++. ++|.-. .+-. .|..|+| |+..|+|.. ..
T Consensus 41 nlLais~~~gll~a~~----~---~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp-~V~~l~f--d~~~L~v~~----~~ 106 (388)
T 1xip_A 41 QNLDISNSKSLFVAAS----G---SKAVVGELQLLRDHITSDSTPLTFKWEKEIP-DVIFVCF--HGDQVLVST----RN 106 (388)
T ss_dssp BCEEEETTTTEEEEEE----T---TEEEEEEHHHHHHHHHSSSCCCCCSEEEECT-TEEEEEE--ETTEEEEEE----SS
T ss_pred cEEEEcCCCCEEEEeC----C---CEEEEEEhhHhhhhhccccccccceEEeeCC-CeeEEEE--CCCEEEEEc----CC
Confidence 3588999888888875 1 2444464333330 012210 0111 2999999 999999982 46
Q ss_pred eEEEEEcccceEEEEEEEEeccCCCc-eEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCC
Q 001314 75 SVKICFFSNNHWYLKYEIRYLRRDGI-RFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSL 153 (1102)
Q Consensus 75 ~vqLWt~~NYHWYLKqei~~~~~~~~-~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~ 153 (1102)
.|.+|.+.+.-. +..+. .....+ .++|-+. . +++++++|.+.+ |+.. + |... +
T Consensus 107 ~l~v~dv~sl~~--~~~~~-~~~~~v~~i~~~~p--~-~av~~~dG~L~v----~dl~--~--------~~~~---~--- 160 (388)
T 1xip_A 107 ALYSLDLEELSE--FRTVT-SFEKPVFQLKNVNN--T-LVILNSVNDLSA----LDLR--T--------KSTK---Q--- 160 (388)
T ss_dssp EEEEEESSSTTC--EEEEE-ECSSCEEEEEECSS--E-EEEEETTSEEEE----EETT--T--------CCEE---E---
T ss_pred cEEEEEchhhhc--cCccc-eeecceeeEEecCC--C-EEEEECCCCEEE----EEcc--C--------Cccc---c---
Confidence 899999887762 11221 112222 3555332 2 666676666653 3221 1 1111 1
Q ss_pred CCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCccccccCCceeeeeeccc---cccCceEEE
Q 001314 154 SLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDMLEDLEGTEFVVEACISE---TAFGSVIHL 230 (1102)
Q Consensus 154 a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~ 230 (1102)
+...|.+|++|+++ +++...||++.+|..+...... . +.+. .++... .....+..+
T Consensus 161 -------------~~~~Vs~v~WSpkG----~~vg~~dg~i~~~~~~~~~~~~--k-~~I~-~Pp~~~~~~~~~~~V~sI 219 (388)
T 1xip_A 161 -------------LAQNVTSFDVTNSQ----LAVLLKDRSFQSFAWRNGEMEK--Q-FEFS-LPSELEELPVEEYSPLSV 219 (388)
T ss_dssp -------------EEESEEEEEECSSE----EEEEETTSCEEEEEEETTEEEE--E-EEEC-CCHHHHTSCTTTSEEEEE
T ss_pred -------------ccCCceEEEEcCCc----eEEEEcCCcEEEEcCCCccccc--c-ceec-CCcccccccCCCeeEEEE
Confidence 22478899999875 4677899999999654321000 0 0010 011111 123468889
Q ss_pred EEecCceEEEE
Q 001314 231 IWLGSHLLLSV 241 (1102)
Q Consensus 231 ~w~~~~~ll~~ 241 (1102)
+|+.++.++++
T Consensus 220 ~wl~~~~flv~ 230 (388)
T 1xip_A 220 TILSPQDFLAV 230 (388)
T ss_dssp EESSSSEEEEE
T ss_pred EEecCCeEEEE
Confidence 99998887764
No 245
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.54 E-value=1.1 Score=54.18 Aligned_cols=104 Identities=7% Similarity=-0.011 Sum_probs=62.7
Q ss_pred ceeeccCCCeEEEEeeccC----CCCCCeEEEEecCC------cceeeeecCCccccceeeeeecCCCCeEEEEEeeC--
Q 001314 4 VLEWMPSGANIAAVYDRKS----ENKCPSIVFYERNG------LERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFE-- 71 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~----~~~~~~VvFFERNG------LrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~-- 71 (1102)
.++|.|.|+.||.+..... .....+|..+..+| -....++. . ....+..+.||+||..||+.....
T Consensus 134 ~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~SpDG~~la~~~~~~~~ 211 (662)
T 3azo_A 134 DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD-D-AHRFVTGPRLSPDGRQAVWLAWDHPR 211 (662)
T ss_dssp EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC-S-CSSEECCCEECTTSSEEEEEEECTTC
T ss_pred CcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEe-c-CCCcccCceECCCCCEEEEEECCCCC
Confidence 5789999999998764310 01235899999887 33222210 1 123577899999999999876432
Q ss_pred ---CCCeEEEEEcc-cceEEEEEEEEeccCCC-ceEEecCCCC
Q 001314 72 ---EYDSVKICFFS-NNHWYLKYEIRYLRRDG-IRFMWHPTKP 109 (1102)
Q Consensus 72 ---~~~~vqLWt~~-NYHWYLKqei~~~~~~~-~~~~W~~e~p 109 (1102)
....|.+|... +-.+--...+..+.... ..+.|+|...
T Consensus 212 ~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 212 MPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp CTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC
T ss_pred CCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe
Confidence 12479999887 44321112222221222 3578998766
No 246
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=93.53 E-value=6.5 Score=43.21 Aligned_cols=19 Identities=11% Similarity=-0.055 Sum_probs=11.8
Q ss_pred hhHHHhhhcHHHHHHHHHH
Q 001314 715 YTIDLRLQRFENALKHIVS 733 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~ 733 (1102)
..+...+|+|++|+.++.+
T Consensus 100 a~~~~~~G~~~~A~~~~~~ 118 (373)
T 1hz4_A 100 SEILFAQGFLQTAWETQEK 118 (373)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHH
Confidence 4455566777777766554
No 247
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=93.45 E-value=3.6 Score=50.75 Aligned_cols=72 Identities=21% Similarity=0.232 Sum_probs=45.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccc----------------cceeeeeecCCCCeEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQID----------------STVELLKWNCMSDLLAAV 67 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~----------------~~v~~L~Wn~DS~iLAv~ 67 (1102)
..+|.|.|+.||.+. +.+|-+++-.|-.--..+..+..+ .....+.||+||..||..
T Consensus 116 ~~~~SPdG~~la~~~-------~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 116 WVTWSPVGHKLAYVW-------NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp EEEECSSTTCEEEEE-------TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred eeEECCCCCEEEEEE-------CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 568999999999985 347777776553322222222111 112458999999999987
Q ss_pred EeeCCCCeEEEEEcccc
Q 001314 68 VRFEEYDSVKICFFSNN 84 (1102)
Q Consensus 68 ~~~~~~~~vqLWt~~NY 84 (1102)
.. +...|.+|++..|
T Consensus 189 ~~--d~~~v~~~~~~~~ 203 (740)
T 4a5s_A 189 QF--NDTEVPLIEYSFY 203 (740)
T ss_dssp EE--ECTTCCEEEEEEC
T ss_pred EE--cccCCceEEEEee
Confidence 53 2334777766433
No 248
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=93.06 E-value=1.3 Score=49.93 Aligned_cols=87 Identities=13% Similarity=-0.088 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHcCC--------------HHHHHHHHHHcCCHHHHHHH-------HhhcCCChH
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFCCSS--------------LEKAMKAYRASGNWSGVLTV-------AGLLKLGKD 824 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------------~ekAl~~y~~ag~W~~al~l-------A~~l~~~~~ 824 (1102)
...+....|..+.+.|+|++|..++..+-. +-.-.++|...|+|.+|..+ +...+.+..
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~ 213 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANSIYCPTQ 213 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhcCCCchH
Confidence 456777888888889999998888776511 12223566677777766544 333333333
Q ss_pred HHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 825 EVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 825 el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
....+...++......|+|.+|...|.+
T Consensus 214 ~~~~~~~~~g~~~~~~~~y~~A~~~~~~ 241 (434)
T 4b4t_Q 214 TVAELDLMSGILHCEDKDYKTAFSYFFE 241 (434)
T ss_dssp HHHHHHHHHHHHTTSSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3344555566666677888888776654
No 249
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=93.00 E-value=0.42 Score=47.13 Aligned_cols=101 Identities=10% Similarity=0.020 Sum_probs=51.5
Q ss_pred HHHHHhcchHHHHhccCCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCH----HHH----HHHHHHcCCHHHHHHHH
Q 001314 745 LMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSL----EKA----MKAYRASGNWSGVLTVA 816 (1102)
Q Consensus 745 ~~~~~~~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~----ekA----l~~y~~ag~W~~al~lA 816 (1102)
++... ..|.+|+++ +|+. ...+...|..+...|+|++|..+|.++-.. ..+ -.+|...|+|++|+..-
T Consensus 18 ~~~~~-~~l~~al~l--~p~~-~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~ 93 (151)
T 3gyz_A 18 AINSG-ATLKDINAI--PDDM-MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLY 93 (151)
T ss_dssp HHHTS-CCTGGGCCS--CHHH-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHCC-CCHHHHhCC--CHHH-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHH
Confidence 33343 555555554 2322 234445566666677777777766665211 111 14455556665555433
Q ss_pred hhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 817 GLL-KLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 817 ~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
.+. .++++. ......+|..+...|++.+|...|
T Consensus 94 ~~al~l~P~~-~~~~~~lg~~~~~lg~~~eA~~~~ 127 (151)
T 3gyz_A 94 AVAFALGKND-YTPVFHTGQCQLRLKAPLKAKECF 127 (151)
T ss_dssp HHHHHHSSSC-CHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhhCCCC-cHHHHHHHHHHHHcCCHHHHHHHH
Confidence 221 111111 135556677777777777777665
No 250
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.83 E-value=6.1 Score=48.22 Aligned_cols=108 Identities=9% Similarity=0.024 Sum_probs=65.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCc-cccceeeeeecCCCCeEEEEEeeCC----------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQ-IDSTVELLKWNCMSDLLAAVVRFEE---------- 72 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~-~~~~v~~L~Wn~DS~iLAv~~~~~~---------- 72 (1102)
.++|.|.|++||-+.... +.+..+|.+++-.|- ++..+.. .......++|++||+.|+.......
T Consensus 125 ~~~~SPDG~~la~~~~~~-G~~~~~i~v~dl~tg---~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 125 TWAVSWDGKKVAFAQKPN-AADEAVLHVIDVDSG---EWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp EEEECTTSSEEEEEEEET-TCSCCEEEEEETTTC---CBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred EEEECCCCCEEEEEECCC-CCceEEEEEEECCCC---CCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 578999999999877653 224678999998763 3320111 1122368999999999998753221
Q ss_pred CCeEEEEEcccceEEEEEEEEeccCC---C-ceEEecCCCCceEEEEeeC
Q 001314 73 YDSVKICFFSNNHWYLKYEIRYLRRD---G-IRFMWHPTKPLQLICWTLD 118 (1102)
Q Consensus 73 ~~~vqLWt~~NYHWYLKqei~~~~~~---~-~~~~W~~e~pl~L~i~t~~ 118 (1102)
...|.+|..+.-.- +..+.+...+ . ..+.|+|.... |++....
T Consensus 201 ~~~v~~~~l~t~~~--~~~lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~~ 247 (695)
T 2bkl_A 201 YTTIRYHTLGTEPS--KDTVVHERTGDPTTFLQSDLSRDGKY-LFVYILR 247 (695)
T ss_dssp GCEEEEEETTSCGG--GCEEEECCCCCTTCEEEEEECTTSCC-EEEEEEE
T ss_pred CCEEEEEECCCCch--hceEEEecCCCCEEEEEEEECCCCCE-EEEEEeC
Confidence 23588998775320 0123333222 1 35788887765 4443433
No 251
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=92.61 E-value=11 Score=47.84 Aligned_cols=190 Identities=13% Similarity=0.135 Sum_probs=122.8
Q ss_pred hhhHHHHHHhcCChh-hhc------hhHHHhhhcHHHHHHHHHHcCC--------Cc----HHHHHHHHHHHhc--chHH
Q 001314 697 EFLPYLQELESMPPL-LMR------YTIDLRLQRFENALKHIVSMGD--------SY----HADCLNLMKKYAQ--LFPL 755 (1102)
Q Consensus 697 EYLpfL~~L~~le~~-~rr------~~Id~~LkryekAl~hl~~~g~--------~~----~deAie~~~~~~~--Ly~~ 755 (1102)
+.||-|..|-.=+.. .|+ -+|.-|||.|++|++.-..+|+ ++ ..+||+.+++. + .++.
T Consensus 52 ~~i~~ie~l~ed~~f~~r~laalvaSkvyy~Lg~~~~al~yaL~aG~~fd~~~~seYv~tiis~cid~y~~~-~~~~~~~ 130 (963)
T 4ady_A 52 NELPDIEALYDDDTFSDREMAALIASKVYYNLGEYESAVKYALAAKDRFDIDEKSQFVETIVSKSIEMYVQE-ASKQYTK 130 (963)
T ss_dssp TTHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHGGGSCTTSCSHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred hhHHHHHHHHcCCCcchHHHHHHHHHHHheeccchHHHHHHHHhCCCcCCCCCcchHHHHHHHHHHHHHHHH-Hhhcccc
Confidence 457888777654321 222 2777899999999999998774 11 14566665443 2 1111
Q ss_pred HHhcc---CCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHH------cCCHHHH----HHHHhhcCCC
Q 001314 756 GLKLI---TDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRA------SGNWSGV----LTVAGLLKLG 822 (1102)
Q Consensus 756 AL~L~---~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~------ag~W~~a----l~lA~~l~~~ 822 (1102)
--.-+ .-++++..+.+..=.+....+.+.+|.-+-..+...+.-.+...+ +.++.++ +.++..+..
T Consensus 131 ~~~~~~~~~id~rL~~Lv~~iv~~cl~hnae~~AvdLalE~erLD~Le~~vd~~~~~~~~~n~~rvclYlls~v~~lv~- 209 (963)
T 4ady_A 131 DEQFYTKDIIDPKLTSIFERMIEKCLKASELKLALGIALEGYRLDIIESALKSKLDQDSTSENVKIINYLLTLAITTVT- 209 (963)
T ss_dssp CTTGGGSSCSCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHTCC-
T ss_pred ccccccccccCHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhhHHHHHHHHHhhccccccccHHHHHHHHHHHhhccCC-
Confidence 00000 124567788888888888899999999999999998765555444 1344333 234444433
Q ss_pred hHHH-HHHHHHHHHHHHHcC--ChHHHHHHHHHhcCCHHHHHHHHHH---hcCHHHHHHHHHh---cCChhhHHHH
Q 001314 823 KDEV-AKLAQELCEELQALG--KPGEAAKIALDYCGDVTNGISLLID---ARDWEEALRVAFM---HRREDLITKV 889 (1102)
Q Consensus 823 ~~el-~~l~~~lA~~L~~~g--~~~eAa~i~l~ylgD~e~AI~~y~~---~~~W~eA~rLa~~---h~~~dL~etv 889 (1102)
+++. .++++.+.+.+.+.. +|-+|.++++. ++|++.+.+++.+ ..+---|..+|.. ...+.+++.|
T Consensus 210 p~~fr~~vLr~l~~Iy~k~~~~dy~~a~~~ai~-LnD~~li~~if~~l~~~~d~l~ayQiAFdL~~~~~Q~fL~~v 284 (963)
T 4ady_A 210 NSKFRSSILRKSFDFLMNMPNCDYLTLNKVVVN-LNDAGLALQLFKKLKEENDEGLSAQIAFDLVSSASQQLLEIL 284 (963)
T ss_dssp CHHHHHHHHHHHHHHHHHSSSCCHHHHHHHHHH-HTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH-cCCHHHHHHHHHHHHhcccHHHHHHHHHHHhcccchHHHHHH
Confidence 3343 578888888888877 99999999976 9999999999998 3444444444433 2234555543
No 252
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=92.57 E-value=3.8 Score=42.07 Aligned_cols=54 Identities=11% Similarity=0.049 Sum_probs=31.6
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
+.+|...|++++|+..|.. ++. ..+.++ ...+....++..+.+.|++.+|...+
T Consensus 154 a~~~~~~~~~~~A~~~~~~------~l~---~~p~~~-~~~~a~~~l~~~~~~~g~~~~A~~~~ 207 (225)
T 2yhc_A 154 AEYYTERGAWVAVVNRVEG------MLR---DYPDTQ-ATRDALPLMENAYRQMQMNAQAEKVA 207 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHH------HHH---HSTTSH-HHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHH------HHH---HCcCCC-ccHHHHHHHHHHHHHcCCcHHHHHHH
Confidence 4556666777777776653 222 232222 23355666777777777777776665
No 253
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=92.31 E-value=0.083 Score=62.06 Aligned_cols=112 Identities=13% Similarity=-0.020 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHhcccChHHHHHHHHHcCCH-------HHHHHHHHHc---------CCHHHHHHHHhhc-CCChHHHHHH
Q 001314 767 EQVLEAWADHLSDVKCFEDAATTYFCCSSL-------EKAMKAYRAS---------GNWSGVLTVAGLL-KLGKDEVAKL 829 (1102)
Q Consensus 767 ~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~-------ekAl~~y~~a---------g~W~~al~lA~~l-~~~~~el~~l 829 (1102)
..++...|.-+...++|++|..+|.++-.. ...-.+|... |+|++|+....+. ..+++. ...
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~ 215 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALTHCKNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD-GRS 215 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC-HHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC-HHH
Confidence 356777899999999999999999887221 1122344555 7777776655431 112211 245
Q ss_pred HHHHHHHHHHc--------CChHHHHHHHHHhcC-CH---------HHHHHHHHHhcCHHHHHHHHHh
Q 001314 830 AQELCEELQAL--------GKPGEAAKIALDYCG-DV---------TNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 830 ~~~lA~~L~~~--------g~~~eAa~i~l~ylg-D~---------e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
...+|..+... |+|.+|...|.+-+. ++ -.-..+|...++|++|+....+
T Consensus 216 ~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 283 (474)
T 4abn_A 216 WYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQ 283 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 66778888777 889999998866433 33 1234667788899999865443
No 254
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=92.28 E-value=0.28 Score=44.39 Aligned_cols=24 Identities=17% Similarity=0.004 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
....++..+...|++.+|...+.+
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~~~ 94 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYYQK 94 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHH
Confidence 344455556666666666665533
No 255
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=92.13 E-value=0.21 Score=61.54 Aligned_cols=99 Identities=9% Similarity=-0.096 Sum_probs=48.8
Q ss_pred cchHHHHhccC-----CcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHh
Q 001314 751 QLFPLGLKLIT-----DPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAG 817 (1102)
Q Consensus 751 ~Ly~~AL~L~~-----d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~ 817 (1102)
+.|++|++.|. +|.. ..++...|.-+...++|++|...|.+|-. +-..-.+|...|+|++ +....
T Consensus 447 g~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~ 524 (681)
T 2pzi_A 447 GDVAKATRKLDDLAERVGWR-WRLVWYRAVAELLTGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQ 524 (681)
T ss_dssp TCHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHH
T ss_pred CCHHHHHHHHHHHhccCcch-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHH
Confidence 56666666551 2221 23455566666667777777777766521 1111234455555544 32221
Q ss_pred h-cCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 818 L-LKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 818 ~-l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
+ +..+++. ...+..+|..+...|++++|...|.+
T Consensus 525 ~al~~~P~~-~~a~~~lg~~~~~~g~~~~A~~~~~~ 559 (681)
T 2pzi_A 525 TVWSTNDGV-ISAAFGLARARSAEGDRVGAVRTLDE 559 (681)
T ss_dssp HHHHHCTTC-HHHHHHHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHhCCch-HHHHHHHHHHHHHcCCHHHHHHHHHh
Confidence 1 1011111 13455566666666666666666533
No 256
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.10 E-value=2 Score=47.50 Aligned_cols=81 Identities=7% Similarity=-0.010 Sum_probs=53.0
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCC--eEEEEE
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYD--SVKICF 80 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~--~vqLWt 80 (1102)
.++|.| .|..||.+...+.......|..++..|-....+.- ......+....|++||..||......... .|.+|.
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 192 HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT-HAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC-CCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee-CCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 578999 99999987743211124578888877754333221 11123577899999999888776443333 499998
Q ss_pred cccce
Q 001314 81 FSNNH 85 (1102)
Q Consensus 81 ~~NYH 85 (1102)
...-.
T Consensus 271 ~~~g~ 275 (388)
T 3pe7_A 271 PETLE 275 (388)
T ss_dssp TTTCC
T ss_pred cCCCc
Confidence 87655
No 257
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=92.10 E-value=0.13 Score=50.12 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=57.6
Q ss_pred hhcHHHHHHHHHHcCCCcHHHHHH------HHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcccChHHHHHH
Q 001314 721 LQRFENALKHIVSMGDSYHADCLN------LMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDVKCFEDAATT 789 (1102)
Q Consensus 721 LkryekAl~hl~~~g~~~~deAie------~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~~~~eeAa~~ 789 (1102)
.|++++|+..|.++-....+..+. ++.+. +.|++|++.+ .+|... .++..+ +.+
T Consensus 10 ~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~-~~~~~A~~~~~~al~~~p~~~-~a~~~l-------------g~~ 74 (150)
T 4ga2_A 10 KADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEA-KEYDLAKKYICTYINVQERDP-KAHRFL-------------GLL 74 (150)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHT-TCHHHHHHHHHHHHHHCTTCH-HHHHHH-------------HHH
T ss_pred cChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHc-CCHHHHHHHHHHHHHhCCCCH-HHHHHH-------------HHH
Confidence 567788888887765432222221 12344 6777777766 133221 222223 345
Q ss_pred HHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 790 YFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 790 Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
|...|++++|+.+|.+ ++.+- +.. .+....+|..+...|++.+|++.|++
T Consensus 75 ~~~~~~~~~A~~~~~~------al~~~---p~~----~~~~~~la~~~~~~~~~~~aa~~~~~ 124 (150)
T 4ga2_A 75 YELEENTDKAVECYRR------SVELN---PTQ----KDLVLKIAELLCKNDVTDGRAKYWVE 124 (150)
T ss_dssp HHHTTCHHHHHHHHHH------HHHHC---TTC----HHHHHHHHHHHHHHCSSSSHHHHHHH
T ss_pred HHHcCchHHHHHHHHH------HHHhC---CCC----HHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 5555666666666543 33331 111 24667778888888888888776643
No 258
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=92.03 E-value=4.2 Score=46.20 Aligned_cols=47 Identities=15% Similarity=0.000 Sum_probs=22.6
Q ss_pred cHHHHHHHHHHHHhhcCCCCCCcchhhhhHhHhcCCccHHHHHHHHHH
Q 001314 588 KVSSVLLAIRKALEEKVPESPSRELCILTTLARSDPPALEEALERIKI 635 (1102)
Q Consensus 588 KVn~IC~air~~l~~~~~~~~~~~l~IlTa~v~k~Pp~le~aL~~i~~ 635 (1102)
....+-+++...++...........+.| +++...-.+.++||....+
T Consensus 30 ~l~~~e~~~~~~~~~~~~~~~a~~yn~L-g~~~~~~G~~~eAl~~~~k 76 (472)
T 4g1t_A 30 SLDDFEDKVFYRTEFQNREFKATMCNLL-AYLKHLKGQNEAALECLRK 76 (472)
T ss_dssp CHHHHHHHHHHHTTSCC---CCHHHHHH-HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCChhHHHHHHHH-HHHHHHCCCHHHHHHHHHH
Confidence 3444445555544433222222222333 4555555678888877653
No 259
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=92.02 E-value=9.4 Score=47.01 Aligned_cols=106 Identities=8% Similarity=-0.047 Sum_probs=62.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCC-----------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEE----------- 72 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~----------- 72 (1102)
.++|.|.|++||.+....+ .+...|.+++-.|-..-...++ +..+..++|++| +-|+.......
T Consensus 167 ~~~~SPDG~~la~~~~~~G-~e~~~i~v~dl~tg~~~~~~~~---~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGG-SDWRTVKFVGVADGKPLADELK---WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEECTTSSEEEEEEEETT-CSEEEEEEEETTTCCEEEEEEE---EEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred eEEECCCCCEEEEEEcCCC-CceEEEEEEECCCCCCCCccCC---CceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 5789999999998876532 2236788888776443222222 223468999999 98888753222
Q ss_pred CCeEEEEEcccceEEEEEEEEeccCC---C-ceEEecCCCCceEEEEee
Q 001314 73 YDSVKICFFSNNHWYLKYEIRYLRRD---G-IRFMWHPTKPLQLICWTL 117 (1102)
Q Consensus 73 ~~~vqLWt~~NYHWYLKqei~~~~~~---~-~~~~W~~e~pl~L~i~t~ 117 (1102)
...|.+|..+.-.- ...+.+...+ . ..+.|+|.... |++...
T Consensus 242 ~~~v~~~~lgt~~~--~~~lv~~~~~~~~~~~~~~~SpDG~~-l~~~~~ 287 (741)
T 1yr2_A 242 NQTVWLHRLGTPQS--ADQPVFATPELPKRGHGASVSSDGRW-VVITSS 287 (741)
T ss_dssp CCEEEEEETTSCGG--GCEEEECCTTCTTCEEEEEECTTSCE-EEEEEE
T ss_pred CCEEEEEECCCCch--hCEEEeccCCCCeEEEEEEECCCCCE-EEEEEE
Confidence 23577887754320 0123333222 1 35789887665 555443
No 260
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=91.96 E-value=0.27 Score=58.68 Aligned_cols=84 Identities=11% Similarity=-0.048 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHcC-----C---HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHH
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCCS-----S---LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQ 838 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~ag-----~---~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~ 838 (1102)
.++..+|.-+...++|++|..+|.++- + +-..-.+|...|++++|+....+. ...++. ......++..+.
T Consensus 58 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~ 136 (568)
T 2vsy_A 58 EAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEE-PYITAQLLNWRR 136 (568)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHH
Confidence 344556666666666666666666551 1 112224555666666665443321 111111 245667888888
Q ss_pred Hc---CChHHHHHHHHH
Q 001314 839 AL---GKPGEAAKIALD 852 (1102)
Q Consensus 839 ~~---g~~~eAa~i~l~ 852 (1102)
.. |++.+|...|.+
T Consensus 137 ~~~~~g~~~~A~~~~~~ 153 (568)
T 2vsy_A 137 RLCDWRALDVLSAQVRA 153 (568)
T ss_dssp HTTCCTTHHHHHHHHHH
T ss_pred HhhccccHHHHHHHHHH
Confidence 88 888888887754
No 261
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=91.93 E-value=2.3 Score=47.70 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhc------CC-------HHHHHHHHHHhcCHHHHHHH
Q 001314 827 AKLAQELCEELQALGKPGEAAKIALDYC------GD-------VTNGISLLIDARDWEEALRV 876 (1102)
Q Consensus 827 ~~l~~~lA~~L~~~g~~~eAa~i~l~yl------gD-------~e~AI~~y~~~~~W~eA~rL 876 (1102)
..+...+|..+.+.|+|.+|..++.+-+ +| +-.-+++|...++|++|..+
T Consensus 135 ~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~ 197 (434)
T 4b4t_Q 135 HSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKAS 197 (434)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHH
Confidence 3466677777777777777777654311 11 12234556666666666544
No 262
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=91.77 E-value=0.24 Score=44.79 Aligned_cols=22 Identities=18% Similarity=0.021 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...+
T Consensus 105 ~~~~la~~~~~~~~~~~A~~~~ 126 (136)
T 2fo7_A 105 AWYNLGNAYYKQGDYDEAIEYY 126 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHH
Confidence 4445566666666666666554
No 263
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=91.74 E-value=3.2 Score=45.76 Aligned_cols=59 Identities=17% Similarity=0.063 Sum_probs=31.7
Q ss_pred HHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCC-hHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 788 TTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLG-KDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 788 ~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~-~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.+|...|++++|++.|.+ ++.++...+.. ..........++..+...|++.+|...+.+
T Consensus 101 ~~~~~~G~~~~A~~~~~~------al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 160 (373)
T 1hz4_A 101 EILFAQGFLQTAWETQEK------AFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARS 160 (373)
T ss_dssp HHHHHTTCHHHHHHHHHH------HHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHH------HHHHHHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 344445555555555433 44444443321 012233455677777788888888777644
No 264
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=91.73 E-value=2.5 Score=47.09 Aligned_cols=37 Identities=11% Similarity=0.056 Sum_probs=19.2
Q ss_pred CChHHHHHHHHHhcCCH------HHHHHHHHHhcCHHHHHHHH
Q 001314 841 GKPGEAAKIALDYCGDV------TNGISLLIDARDWEEALRVA 877 (1102)
Q Consensus 841 g~~~eAa~i~l~ylgD~------e~AI~~y~~~~~W~eA~rLa 877 (1102)
+++.+|..+|-+.+.++ ..-..++...++|++|-...
T Consensus 192 ~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L 234 (310)
T 3mv2_B 192 ETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIV 234 (310)
T ss_dssp STTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHH
Confidence 35666666655543322 23344556666666665543
No 265
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=91.71 E-value=11 Score=39.85 Aligned_cols=175 Identities=12% Similarity=-0.045 Sum_probs=88.0
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec-CCcceeeeecC--CccccceeeeeecCCCCeEEEEEe-----------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER-NGLERSSFDIN--EQIDSTVELLKWNCMSDLLAAVVR----------- 69 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER-NGLrhgeF~L~--~~~~~~v~~L~Wn~DS~iLAv~~~----------- 69 (1102)
.++|.|.|+++++.. ....|..|+. +|-. ..+.-. ......+..+.|++||.+++.-..
T Consensus 73 ~l~~~~dg~l~v~~~------~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 73 GHCLNKQGHLIACSH------GLRRLERQREPGGEW-ESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp EEEECTTCCEEEEET------TTTEEEEECSTTCCE-EEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSC
T ss_pred eeeECCCCcEEEEec------CCCeEEEEcCCCCcE-EEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccc
Confidence 478899999988864 2457888987 5532 222111 111124678999999997764110
Q ss_pred ---eCCCCeEEEEEcccceEEEEEEEEeccCC-CceEEecCCCCceEEEEeeCCcEEEEEEE-----------E------
Q 001314 70 ---FEEYDSVKICFFSNNHWYLKYEIRYLRRD-GIRFMWHPTKPLQLICWTLDGQITTYNFI-----------W------ 128 (1102)
Q Consensus 70 ---~~~~~~vqLWt~~NYHWYLKqei~~~~~~-~~~~~W~~e~pl~L~i~t~~g~~~~~~~~-----------w------ 128 (1102)
......|..|+.. -. ......... ...+.|+|.... |+..+.++.+..++.. +
T Consensus 146 ~~~~~~~~~l~~~~~~-g~----~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 219 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPD-GT----LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGK 219 (296)
T ss_dssp CCCCSSSCEEEEECTT-SC----EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSC
T ss_pred ccccCCCcEEEEECCC-CC----EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCC
Confidence 0012355555543 11 111111111 135889887765 4333334566665542 1
Q ss_pred --eeeecCCcEEEEEeCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEec
Q 001314 129 --TTAVMENSTALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDL 199 (1102)
Q Consensus 129 --~~~~~d~~~vaVIDG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~ 199 (1102)
.+..+.+|.+.|.++..|.+-..... ....+..+..+.+++|+.... ..+ .+.+.+.|.-++.
T Consensus 220 p~~i~~d~~G~l~v~~~~~v~~~~~~g~------~~~~~~~~~~~~~~~f~~~d~-~~L-~v~t~~~l~~~~~ 284 (296)
T 3e5z_A 220 TDGLRVDAGGLIWASAGDGVHVLTPDGD------ELGRVLTPQTTSNLCFGGPEG-RTL-YMTVSTEFWSIET 284 (296)
T ss_dssp CCSEEEBTTSCEEEEETTEEEEECTTSC------EEEEEECSSCCCEEEEESTTS-CEE-EEEETTEEEEEEC
T ss_pred CCeEEECCCCCEEEEcCCeEEEECCCCC------EEEEEECCCCceeEEEECCCC-CEE-EEEcCCeEEEEEc
Confidence 01122334444444555544322211 223344454577888863222 233 3456666655554
No 266
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=91.61 E-value=2.6 Score=52.04 Aligned_cols=80 Identities=14% Similarity=0.215 Sum_probs=49.7
Q ss_pred ceeeccCCCeEEEEeeccC----------------------------C--CCCCeEEEEecCC---c---ceeeeecCCc
Q 001314 4 VLEWMPSGANIAAVYDRKS----------------------------E--NKCPSIVFYERNG---L---ERSSFDINEQ 47 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~----------------------------~--~~~~~VvFFERNG---L---rhgeF~L~~~ 47 (1102)
.++|.|.|..||....... + +....|..++-+| - +.-+...|..
T Consensus 175 ~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~ 254 (740)
T 4a5s_A 175 ALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPAS 254 (740)
T ss_dssp CEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHH
T ss_pred ceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCcc
Confidence 4889999999998753210 0 0012456666665 2 2233333321
Q ss_pred ---cccceeeeeecCCCCeEEEEEeeCCC-CeEEEEEccc
Q 001314 48 ---IDSTVELLKWNCMSDLLAAVVRFEEY-DSVKICFFSN 83 (1102)
Q Consensus 48 ---~~~~v~~L~Wn~DS~iLAv~~~~~~~-~~vqLWt~~N 83 (1102)
.+..+..++|++||.+++.++...+. ..|.+|....
T Consensus 255 ~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 255 MLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp HHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred CCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 33458889999999988888765433 2688888654
No 267
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=91.54 E-value=0.61 Score=49.24 Aligned_cols=126 Identities=13% Similarity=0.008 Sum_probs=70.5
Q ss_pred hhcHHHHHHHHHHc---CCC--cHHHHHHHHHH----HhcchHHHHhccC---CcHhHHHHHHHHHHHHhc----ccChH
Q 001314 721 LQRFENALKHIVSM---GDS--YHADCLNLMKK----YAQLFPLGLKLIT---DPAKMEQVLEAWADHLSD----VKCFE 784 (1102)
Q Consensus 721 LkryekAl~hl~~~---g~~--~~deAie~~~~----~~~Ly~~AL~L~~---d~~~~~~i~~~yAd~L~~----~~~~e 784 (1102)
.+++++|+.+|.++ +.. .+..+.-| .. . +.|++|++.+. +. .....+...|..+.. .++++
T Consensus 55 ~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~-~~g~~~~-~~~~~A~~~~~~a~~~-~~~~a~~~lg~~~~~~~~~~~~~~ 131 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLNYSNGCHLLGNLY-YSGQGVS-QNTNKALQYYSKACDL-KYAEGCASLGGIYHDGKVVTRDFK 131 (273)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHTSSSC-CCHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHCSSSCCCHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHH-hCCCCcc-cCHHHHHHHHHHHHHc-CCccHHHHHHHHHHcCCCcccCHH
Confidence 77888888888765 210 01122222 23 4 67777777761 11 123455667777777 78888
Q ss_pred HHHHHHHHcCCH--HHH----HHHHHH----cCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHH----cCChHHHHHH
Q 001314 785 DAATTYFCCSSL--EKA----MKAYRA----SGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQA----LGKPGEAAKI 849 (1102)
Q Consensus 785 eAa~~Y~~ag~~--ekA----l~~y~~----ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~----~g~~~eAa~i 849 (1102)
+|..+|.++-.. ..| -.+|.. .+++++|+....+. ..+. ......++..+.. .+++.+|...
T Consensus 132 ~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~---~~a~~~lg~~~~~g~~~~~~~~~A~~~ 208 (273)
T 1ouv_A 132 KAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD---SPGCFNAGNMYHHGEGATKNFKEALAR 208 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTCSSCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 888888776221 111 134444 56677766544321 1111 1345566777777 7777777776
Q ss_pred HHH
Q 001314 850 ALD 852 (1102)
Q Consensus 850 ~l~ 852 (1102)
|.+
T Consensus 209 ~~~ 211 (273)
T 1ouv_A 209 YSK 211 (273)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
No 268
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=91.45 E-value=0.69 Score=47.30 Aligned_cols=24 Identities=8% Similarity=0.110 Sum_probs=15.2
Q ss_pred hhhchhHHHhhhcHHHHHHHHHHc
Q 001314 711 LLMRYTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 711 ~~rr~~Id~~LkryekAl~hl~~~ 734 (1102)
.+.+..+....|+|++|+..|.++
T Consensus 7 ~~~~g~~~~~~g~~~~A~~~~~~a 30 (208)
T 3urz_A 7 MLQKVSAAIEAGQNGQAVSYFRQT 30 (208)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHH
Confidence 344555555677777777776654
No 269
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=91.38 E-value=2.3 Score=46.25 Aligned_cols=96 Identities=20% Similarity=0.139 Sum_probs=59.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeC------------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFE------------ 71 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~------------ 71 (1102)
.++|.|.|..||......+ +....|..++-.|-+.....- . .. +..+.|++||+.||+.....
T Consensus 63 ~~~~SpDg~~la~~~~~~~-~~~~~l~~~~~~~g~~~~l~~-~--~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 63 MPRISPDGKKIAFMRANEE-KKVSEIWVADLETLSSKKILE-A--KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp EEEECTTSSEEEEEEEETT-TTEEEEEEEETTTTEEEEEEE-E--SE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred CeEECCCCCEEEEEEeccC-CCcceEEEEECCCCceEEEEc-C--CC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 4799999999998775421 123467777766633322211 1 12 88999999999999886320
Q ss_pred ------------CCCeEEEEEcccceEEEEEEEEeccCCCceEEecCCC
Q 001314 72 ------------EYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTK 108 (1102)
Q Consensus 72 ------------~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~ 108 (1102)
....|.+|....-.. .+.+..+ ....+.|+|..
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~~~--~~~~~~~spdg 182 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFEKP--RFSSGIWHRDK 182 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEE--EEEEEEE--TTCEEEEETTE
T ss_pred ceeecCcccccCccceEEEEECCCCeE--EeeecCC--CcccccCCCCe
Confidence 124677887766542 1223322 22357888876
No 270
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.34 E-value=0.79 Score=54.55 Aligned_cols=107 Identities=7% Similarity=-0.110 Sum_probs=63.4
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
.++|.|.|.+||++....+ +...|..++-.|-... .|.. ....+..++|++||..|| ....+....|.+|....
T Consensus 154 ~~~~spDG~~la~~~~~~~--~~~~i~~~d~~~g~~~--~l~~-~~~~~~~~~~SpDG~~l~-~~~~~~~~~i~~~d~~~ 227 (582)
T 3o4h_A 154 GFVSDIRGDLIAGLGFFGG--GRVSLFTSNLSSGGLR--VFDS-GEGSFSSASISPGMKVTA-GLETAREARLVTVDPRD 227 (582)
T ss_dssp EEEEEEETTEEEEEEEEET--TEEEEEEEETTTCCCE--EECC-SSCEEEEEEECTTSCEEE-EEECSSCEEEEEECTTT
T ss_pred eEEECCCCCEEEEEEEcCC--CCeEEEEEcCCCCCce--Eeec-CCCccccceECCCCCEEE-EccCCCeeEEEEEcCCC
Confidence 5789999999997665421 2356888884432222 2322 223579999999999999 33222233799998776
Q ss_pred ceEEEEEEEEeccCCC-c-eEE--------ecCCCCceEEEEeeCCcEE
Q 001314 84 NHWYLKYEIRYLRRDG-I-RFM--------WHPTKPLQLICWTLDGQIT 122 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~-~~~--------W~~e~pl~L~i~t~~g~~~ 122 (1102)
-.. . .+...+. + .+. |+|.. ..++..+.+|.+.
T Consensus 228 ~~~----~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~ 270 (582)
T 3o4h_A 228 GSV----E-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSA 270 (582)
T ss_dssp CCE----E-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEE
T ss_pred CcE----E-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEE
Confidence 542 1 2222222 2 245 99887 4344444455443
No 271
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=91.34 E-value=4.7 Score=46.77 Aligned_cols=67 Identities=16% Similarity=0.047 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHH
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGE 845 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~e 845 (1102)
.-..+...|.-+..+|+|++|..+|.+ |++.|.+ .++....++-..+..||..+..+|+|++
T Consensus 328 ~~~~~~~L~~~y~~~g~~~eA~~~~~~------~L~i~~~------------~lg~~Hp~~a~~l~nLa~~~~~~g~~~e 389 (429)
T 3qwp_A 328 QLKVLDCAMDACINLGLLEEALFYGTR------TMEPYRI------------FFPGSHPVRGVQVMKVGKLQLHQGMFPQ 389 (429)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHH------HHHHHHH------------HSCSSCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHH------HHHhHHH------------HcCCCChHHHHHHHHHHHHHHhcCCHHH
Confidence 345555666666666777777666543 4444443 2344444666677888888888888888
Q ss_pred HHHHH
Q 001314 846 AAKIA 850 (1102)
Q Consensus 846 Aa~i~ 850 (1102)
|..+|
T Consensus 390 A~~~~ 394 (429)
T 3qwp_A 390 AMKNL 394 (429)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
No 272
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=91.23 E-value=0.15 Score=51.47 Aligned_cols=43 Identities=5% Similarity=-0.055 Sum_probs=19.6
Q ss_pred cchHHHHhcc-CCcHhH---HHHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 751 QLFPLGLKLI-TDPAKM---EQVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 751 ~Ly~~AL~L~-~d~~~~---~~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
+.|++|.+.+ ...+.. ...+...|..+...++|++|..+|.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~a 64 (198)
T 2fbn_A 18 YFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEA 64 (198)
T ss_dssp ----CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 5667777776 333222 233444455555555555555555443
No 273
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.23 E-value=6.5 Score=42.37 Aligned_cols=111 Identities=9% Similarity=-0.100 Sum_probs=60.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecC--CccccceeeeeecCCCCeEEEE----Eee-------
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDIN--EQIDSTVELLKWNCMSDLLAAV----VRF------- 70 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~--~~~~~~v~~L~Wn~DS~iLAv~----~~~------- 70 (1102)
.++|-|.|+++++.. ....|..|+.+|-.. .+.-+ ......+..+.|++||.+...= +..
T Consensus 90 gl~~d~dG~l~v~~~------~~~~v~~~~~~g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 90 GNAVDAQQRLVHCEH------GRRAITRSDADGQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp EEEECTTSCEEEEET------TTTEEEEECTTSCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred eeeECCCCCEEEEEC------CCCEEEEECCCCCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCcccccccccc
Confidence 478899999988864 245788999876421 11111 1111236789999999966520 000
Q ss_pred ---CCCCeEEEEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeC------CcEEEEEE
Q 001314 71 ---EEYDSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLD------GQITTYNF 126 (1102)
Q Consensus 71 ---~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~------g~~~~~~~ 126 (1102)
.....|..|+...-.+- . +. .......+.|+|.... |++..+. +.+..++.
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~--~-~~-~~~~p~gl~~spdg~~-lyv~~~~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQ--R-MA-DLDHPNGLAFSPDEQT-LYVSQTPEQGHGSVEITAFAW 222 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCE--E-EE-EESSEEEEEECTTSSE-EEEEECCC---CCCEEEEEEE
T ss_pred ccccCCCeEEEEcCCCCcEE--E-Ee-cCCCCcceEEcCCCCE-EEEEecCCcCCCCCEEEEEEe
Confidence 01235666765322221 1 11 1112234789887654 6664443 45666554
No 274
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=91.17 E-value=2.2 Score=43.49 Aligned_cols=24 Identities=4% Similarity=-0.087 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
....+|..+...|++.+|...|.+
T Consensus 78 ~~~~l~~~~~~~~~~~~A~~~~~~ 101 (228)
T 4i17_A 78 AYIGKSAAYRDMKNNQEYIATLTE 101 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHH
Confidence 445555555666666666555533
No 275
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.08 E-value=7.2 Score=46.11 Aligned_cols=70 Identities=13% Similarity=0.014 Sum_probs=40.8
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
.+++.|.|..||.+... ...+-+|.-.|=.-.. |.......|..+.|++| .+|+..-.....+..+||..
T Consensus 26 ~~~~~~DG~~la~~s~~-----~g~~~lw~~~~g~~~~--lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 26 SLQGVVDGDKLLVVGFS-----EGSVNAYLYDGGETVK--LNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp EEEEEETTTEEEEEEEE-----TTEEEEEEEETTEEEE--CCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEE
T ss_pred eeecCCCCCeEEEEEcc-----CCceeEEEEcCCCcEe--eecccccccccccCCCC-eEEEEeccCCCCcceEEEEE
Confidence 46889999999998753 2356666633321111 22212236889999999 76665432122344566644
No 276
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=91.08 E-value=0.46 Score=44.83 Aligned_cols=22 Identities=14% Similarity=-0.093 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|+|.+|...|
T Consensus 83 a~~~lg~~~~~~~~~~~A~~~~ 104 (126)
T 4gco_A 83 GYIRKAACLVAMREWSKAQRAY 104 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHH
Confidence 4445555555555555555544
No 277
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=91.03 E-value=9.1 Score=40.26 Aligned_cols=70 Identities=13% Similarity=0.113 Sum_probs=49.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
.+++-|.|+++++.. ....|..|+.+|-....|..+. ....+..|++++|+.+++. ......|++|+...
T Consensus 125 ~i~~~~~g~l~v~~~------~~~~i~~~~~~g~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~---~~~~~~i~~~~~~g 194 (286)
T 1q7f_A 125 GVTVDNKGRIIVVEC------KVMRVIIFDQNGNVLHKFGCSK-HLEFPNGVVVNDKQEIFIS---DNRAHCVKVFNYEG 194 (286)
T ss_dssp EEEECTTSCEEEEET------TTTEEEEECTTSCEEEEEECTT-TCSSEEEEEECSSSEEEEE---EGGGTEEEEEETTC
T ss_pred EEEEeCCCCEEEEEC------CCCEEEEEcCCCCEEEEeCCCC-ccCCcEEEEECCCCCEEEE---ECCCCEEEEEcCCC
Confidence 467788898877754 2468999999987776665442 1225789999999986543 23356899998754
No 278
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.02 E-value=2.2 Score=49.75 Aligned_cols=68 Identities=15% Similarity=0.006 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHH
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGE 845 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~e 845 (1102)
....+...|.-+.++|+|++|..+|.+ |++.|.+ .++....++...+..||..+..+|+|++
T Consensus 339 ~a~~~~nLa~~y~~~g~~~eA~~~~~~------aL~i~~~------------~lG~~Hp~~a~~l~nLa~~~~~qg~~~e 400 (433)
T 3qww_A 339 MLHMMYQAMGVCLYMQDWEGALKYGQK------IIKPYSK------------HYPVYSLNVASMWLKLGRLYMGLENKAA 400 (433)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHH------HHHHHHH------------HSCSSCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHH------HHHHHHH------------HcCCCChHHHHHHHHHHHHHHhccCHHH
Confidence 345566667766777777777766654 3444432 3444455667778889999999999999
Q ss_pred HHHHHH
Q 001314 846 AAKIAL 851 (1102)
Q Consensus 846 Aa~i~l 851 (1102)
|..+|.
T Consensus 401 A~~~~~ 406 (433)
T 3qww_A 401 GEKALK 406 (433)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888763
No 279
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=90.92 E-value=3.5 Score=45.77 Aligned_cols=71 Identities=10% Similarity=0.043 Sum_probs=49.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC--Ccc--eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN--GLE--RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKIC 79 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN--GLr--hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLW 79 (1102)
.++|.|.|++++++.+ ....|..|..+ |.. .+.+.+|. ....+..+.|++||..|++.. .....|++|
T Consensus 149 ~~~~spdG~~l~~~~~-----~~~~v~~~~~~~~g~~~~~~~~~~~~-~g~~p~~~~~spdg~~l~v~~--~~~~~v~v~ 220 (365)
T 1jof_A 149 GMVFDPTETYLYSADL-----TANKLWTHRKLASGEVELVGSVDAPD-PGDHPRWVAMHPTGNYLYALM--EAGNRICEY 220 (365)
T ss_dssp EEEECTTSSEEEEEET-----TTTEEEEEEECTTSCEEEEEEEECSS-TTCCEEEEEECTTSSEEEEEE--TTTTEEEEE
T ss_pred EEEECCCCCEEEEEcC-----CCCEEEEEEECCCCCEEEeeeEecCC-CCCCCCEeEECCCCCEEEEEE--CCCCeEEEE
Confidence 5789999998887653 23588889875 532 23444331 133588999999999998875 345689999
Q ss_pred Ecc
Q 001314 80 FFS 82 (1102)
Q Consensus 80 t~~ 82 (1102)
...
T Consensus 221 ~~~ 223 (365)
T 1jof_A 221 VID 223 (365)
T ss_dssp EEC
T ss_pred EEe
Confidence 753
No 280
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=90.68 E-value=1.7 Score=43.57 Aligned_cols=18 Identities=11% Similarity=0.263 Sum_probs=8.4
Q ss_pred HHHhhhcHHHHHHHHHHc
Q 001314 717 IDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 717 Id~~LkryekAl~hl~~~ 734 (1102)
+....|+|++|+.+|.++
T Consensus 15 ~~~~~~~~~~A~~~~~~a 32 (213)
T 1hh8_A 15 LAADKKDWKGALDAFSAV 32 (213)
T ss_dssp HHHHTTCHHHHHHHHHTS
T ss_pred HHHHhCCHHHHHHHHHHH
Confidence 333445555555554443
No 281
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=90.47 E-value=8.5 Score=41.10 Aligned_cols=18 Identities=6% Similarity=-0.189 Sum_probs=10.4
Q ss_pred HHHHHHHHhcCChhhHHH
Q 001314 871 EEALRVAFMHRREDLITK 888 (1102)
Q Consensus 871 ~eA~rLa~~h~~~dL~et 888 (1102)
.+|+.++...+.+.+.+.
T Consensus 261 ~~Al~i~~~~~~~~~~~~ 278 (293)
T 3u3w_A 261 KKASFFFDILEMHAYKEA 278 (293)
T ss_dssp HHHHHHHHHTTCTGGGGG
T ss_pred HHHHHHHHHhCCHHHHHH
Confidence 456677776655554443
No 282
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=90.46 E-value=3.8 Score=42.80 Aligned_cols=23 Identities=4% Similarity=-0.087 Sum_probs=17.5
Q ss_pred hhchhHHHhhhcHHHHHHHHHHc
Q 001314 712 LMRYTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~ 734 (1102)
+..+.+...+|+|++|+..|.++
T Consensus 56 ~~lg~~~~~~~~~~~A~~~~~~~ 78 (261)
T 3qky_A 56 FYLARAYYQNKEYLLAASEYERF 78 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcHHHHHHHHHHH
Confidence 44566777789999999888765
No 283
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=90.44 E-value=1.5 Score=48.19 Aligned_cols=86 Identities=14% Similarity=0.082 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHcC--CH------HHHHHHHHHcCCHHHHHHHHhhcCC-ChHHH-HHHHHHHHH
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFCCS--SL------EKAMKAYRASGNWSGVLTVAGLLKL-GKDEV-AKLAQELCE 835 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag--~~------ekAl~~y~~ag~W~~al~lA~~l~~-~~~el-~~l~~~lA~ 835 (1102)
..++...||..|.+.++|++|..+|..+- .. ..|+ .|.+.++|.+++........ +.+.. .....-++.
T Consensus 101 r~dl~LayA~~L~~~g~y~eA~~~l~~~~~~~p~~~~~~~~a~-l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~ 179 (282)
T 4f3v_A 101 PLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAV-VYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGV 179 (282)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTSSCCTTCHHHHHHHHHH-HHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCchHHHHHHHH-HHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHH
Confidence 46788889999999999999999998772 22 2333 56678899999887754322 11111 245666777
Q ss_pred HHHHcCChHHHHHHHHH
Q 001314 836 ELQALGKPGEAAKIALD 852 (1102)
Q Consensus 836 ~L~~~g~~~eAa~i~l~ 852 (1102)
.+.+.|++.+|...|-+
T Consensus 180 al~~LG~~~eAl~~l~~ 196 (282)
T 4f3v_A 180 AAANLALFTEAERRLTE 196 (282)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHH
Confidence 77778888877776643
No 284
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=90.39 E-value=1.1 Score=42.69 Aligned_cols=22 Identities=23% Similarity=-0.059 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...|
T Consensus 83 ~~~~~a~~~~~~~~~~~A~~~~ 104 (166)
T 1a17_A 83 GYYRRAASNMALGKFRAALRDY 104 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHH
Confidence 4445555555555555555544
No 285
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=90.38 E-value=0.88 Score=44.19 Aligned_cols=20 Identities=10% Similarity=-0.125 Sum_probs=8.7
Q ss_pred HHHHHHHHHHcCChHHHHHH
Q 001314 830 AQELCEELQALGKPGEAAKI 849 (1102)
Q Consensus 830 ~~~lA~~L~~~g~~~eAa~i 849 (1102)
...+|..+...|+|.+|...
T Consensus 82 ~~~lg~~~~~~g~~~~A~~~ 101 (164)
T 3sz7_A 82 WSRLGLARFDMADYKGAKEA 101 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHH
Confidence 33444444444444444433
No 286
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=90.13 E-value=1.4 Score=50.14 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=20.1
Q ss_pred HHHHHHHcCChHHHHHHHHHhc----CCH---HHHHHHHHHhcCHHHHHHHHH
Q 001314 833 LCEELQALGKPGEAAKIALDYC----GDV---TNGISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 833 lA~~L~~~g~~~eAa~i~l~yl----gD~---e~AI~~y~~~~~W~eA~rLa~ 878 (1102)
++......+++.+|.++|.+-+ .+. .....+|...++|++|+....
T Consensus 219 ~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 271 (472)
T 4g1t_A 219 LHKMREEGEEEGEGEKLVEEALEKAPGVTDVLRSAAKFYRRKDEPDKAIELLK 271 (472)
T ss_dssp HHHCC------CHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 3333344566667766654311 111 123455666777777765433
No 287
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=89.72 E-value=2.3 Score=44.62 Aligned_cols=132 Identities=8% Similarity=-0.040 Sum_probs=66.6
Q ss_pred hHHHhhhcHHHHHHHHHHc---CCC--cHHHHHHHHHH----HhcchHHHHhccCC--cHhHHHHHHHHHHHHhc----c
Q 001314 716 TIDLRLQRFENALKHIVSM---GDS--YHADCLNLMKK----YAQLFPLGLKLITD--PAKMEQVLEAWADHLSD----V 780 (1102)
Q Consensus 716 ~Id~~LkryekAl~hl~~~---g~~--~~deAie~~~~----~~~Ly~~AL~L~~d--~~~~~~i~~~yAd~L~~----~ 780 (1102)
.+....|+|++|+.+|.++ ++. .+..+.-| .. . +.|++|++.|.. .......+...|..+.. .
T Consensus 14 ~~~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~-~~g~~~~-~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~ 91 (273)
T 1ouv_A 14 AKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLY-YQGQGVE-KNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVS 91 (273)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHTSSSC-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSC
T ss_pred HHHHhCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH-HcCCCcC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcc
Confidence 3334456777777776654 110 01112212 22 3 566666666610 00123455566777777 7
Q ss_pred cChHHHHHHHHHcC---CHH---HHHHHHHH----cCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHH----cCChHH
Q 001314 781 KCFEDAATTYFCCS---SLE---KAMKAYRA----SGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQA----LGKPGE 845 (1102)
Q Consensus 781 ~~~eeAa~~Y~~ag---~~e---kAl~~y~~----ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~----~g~~~e 845 (1102)
+++++|..+|.++- +.. ..-.+|.. .+++++|+..-.+. ..+. ......++..+.. .+++.+
T Consensus 92 ~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~---~~a~~~lg~~~~~~~~~~~~~~~ 168 (273)
T 1ouv_A 92 QNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND---GDGCTILGSLYDAGRGTPKDLKK 168 (273)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTSSSCCCHHH
T ss_pred cCHHHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcCc---HHHHHHHHHHHHcCCCCCCCHHH
Confidence 88888887777662 211 11134455 56666665443321 1111 1244555666665 667777
Q ss_pred HHHHHHH
Q 001314 846 AAKIALD 852 (1102)
Q Consensus 846 Aa~i~l~ 852 (1102)
|...|.+
T Consensus 169 A~~~~~~ 175 (273)
T 1ouv_A 169 ALASYDK 175 (273)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666533
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.53 E-value=0.62 Score=57.37 Aligned_cols=134 Identities=13% Similarity=0.007 Sum_probs=77.6
Q ss_pred hhchhHHHhhhcHHHHHHHHHHc---CCCc----HHHHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhc
Q 001314 712 LMRYTIDLRLQRFENALKHIVSM---GDSY----HADCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSD 779 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~---g~~~----~deAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~ 779 (1102)
..+..+...+|+|++|+..|.++ .++. +..+.-+. .. +.|++|++.| .+|.. ...+...|.-+..
T Consensus 437 ~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~-~~-g~~~~A~~~~~~al~l~P~~-~~~~~~lg~~~~~ 513 (681)
T 2pzi_A 437 LMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAEL-LT-GDYDSATKHFTEVLDTFPGE-LAPKLALAATAEL 513 (681)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HH-TCHHHHHHHHHHHHHHSTTC-SHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHH-Hc-CCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHH
Confidence 44566677789999999988765 2221 23333333 44 6788887776 13332 2445567777777
Q ss_pred ccChHHHHHHHHHcC-----C---HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcC--------C
Q 001314 780 VKCFEDAATTYFCCS-----S---LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALG--------K 842 (1102)
Q Consensus 780 ~~~~eeAa~~Y~~ag-----~---~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g--------~ 842 (1102)
.++|++ ...|.++= + +-.--.+|...|++++|+....+. ..+++. ......++..+...+ +
T Consensus 514 ~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-~~a~~~~~~~~~~~~~~~~~~~~~ 591 (681)
T 2pzi_A 514 AGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHF-TTARLTSAVTLLSGRSTSEVTEEQ 591 (681)
T ss_dssp HTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTH-HHHHHHHHHHTC-------CCHHH
T ss_pred cCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCccc-HHHHHHHHHHHHccCCCCCCCHHH
Confidence 888877 77777652 1 112225677888888887766553 233322 334455566654433 3
Q ss_pred hHHHHHHH
Q 001314 843 PGEAAKIA 850 (1102)
Q Consensus 843 ~~eAa~i~ 850 (1102)
+.+|.+.+
T Consensus 592 ~~~A~~~l 599 (681)
T 2pzi_A 592 IRDAARRV 599 (681)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55566554
No 289
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=89.49 E-value=1.5 Score=43.87 Aligned_cols=25 Identities=12% Similarity=-0.279 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.....+|..+...|+|.+|...|.+
T Consensus 72 ~~~~~lg~~~~~~~~~~~A~~~~~~ 96 (213)
T 1hh8_A 72 VAYFQRGMLYYQTEKYDLAIKDLKE 96 (213)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4566677777778888888777644
No 290
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=89.27 E-value=6.4 Score=45.57 Aligned_cols=179 Identities=8% Similarity=-0.041 Sum_probs=85.4
Q ss_pred CCcchhhHHHHHHhcCChh---hhchhHHHh----hhcHHHHHHHHHHcCCC-cHH----HHHHHHHH---HhcchHHHH
Q 001314 693 RDPKEFLPYLQELESMPPL---LMRYTIDLR----LQRFENALKHIVSMGDS-YHA----DCLNLMKK---YAQLFPLGL 757 (1102)
Q Consensus 693 kDPkEYLpfL~~L~~le~~---~rr~~Id~~----LkryekAl~hl~~~g~~-~~d----eAie~~~~---~~~Ly~~AL 757 (1102)
+|+.+=+.++++.-..... +.-..+... .+++++|+.+|.++-+. ..+ .+.-|... . +.+++|+
T Consensus 93 ~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~-~d~~~A~ 171 (490)
T 2xm6_A 93 QDYAQAVIWYKKAALKGLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVT-RDYVMAR 171 (490)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSC-CCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCC-CCHHHHH
Confidence 4444446666555444211 122233223 45788888887765211 111 12111110 2 5677777
Q ss_pred hccC---CcHhHHHHHHHHHHHHhc----ccChHHHHHHHHHc---CCHH---HHHHHHHH----cCCHHHHHHHHhhc-
Q 001314 758 KLIT---DPAKMEQVLEAWADHLSD----VKCFEDAATTYFCC---SSLE---KAMKAYRA----SGNWSGVLTVAGLL- 819 (1102)
Q Consensus 758 ~L~~---d~~~~~~i~~~yAd~L~~----~~~~eeAa~~Y~~a---g~~e---kAl~~y~~----ag~W~~al~lA~~l- 819 (1102)
++|. +. .....+...|..+.. .+++++|...|.++ |+.. ..-.+|.. .+++++|+..-.+.
T Consensus 172 ~~~~~a~~~-~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~ 250 (490)
T 2xm6_A 172 EWYSKAAEQ-GNVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSA 250 (490)
T ss_dssp HHHHHHHHT-TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHH
Confidence 7761 11 113345556666665 77888888877765 2211 11122332 44555555443321
Q ss_pred CCChHHHHHHHHHHHHHHHH----cCChHHHHHHHHHhc--CCHHH---HHHHHHHh-----cCHHHHHHH
Q 001314 820 KLGKDEVAKLAQELCEELQA----LGKPGEAAKIALDYC--GDVTN---GISLLIDA-----RDWEEALRV 876 (1102)
Q Consensus 820 ~~~~~el~~l~~~lA~~L~~----~g~~~eAa~i~l~yl--gD~e~---AI~~y~~~-----~~W~eA~rL 876 (1102)
.... ......++..+.. .+++.+|...|.+-+ |+++. .-.+|..+ +++++|+..
T Consensus 251 ~~~~---~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~~~~g~~~~~~~A~~~ 318 (490)
T 2xm6_A 251 EQGN---SIAQFRLGYILEQGLAGAKEPLKALEWYRKSAEQGNSDGQYYLAHLYDKGAEGVAKNREQAISW 318 (490)
T ss_dssp TTTC---HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHCBTTBCCCHHHHHHH
T ss_pred HCCC---HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHcCCCCCcCCHHHHHHH
Confidence 1111 1234455555555 677777777664422 33332 22344444 566666654
No 291
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=88.95 E-value=0.73 Score=42.43 Aligned_cols=22 Identities=9% Similarity=-0.112 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...|
T Consensus 74 ~~~~lg~~~~~~~~~~~A~~~~ 95 (126)
T 3upv_A 74 AYIRKATAQIAVKEYASALETL 95 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCHHHHHHHH
Confidence 4445555555555555555544
No 292
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=88.93 E-value=0.86 Score=54.24 Aligned_cols=109 Identities=8% Similarity=-0.070 Sum_probs=63.1
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHH
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQA 839 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~ 839 (1102)
++...|..+...++|++|..+|.++-. +-.--.+|...|+|++|+....+. ...++. ......+|..+..
T Consensus 25 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~ 103 (568)
T 2vsy_A 25 AWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEH-PGIALWLGHALED 103 (568)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHH
Confidence 445566666666777777776666521 112224556666666665544331 111211 3467788999999
Q ss_pred cCChHHHHHHHHHhc----CCHH---HHHHHHHHh---cCHHHHHHHHH
Q 001314 840 LGKPGEAAKIALDYC----GDVT---NGISLLIDA---RDWEEALRVAF 878 (1102)
Q Consensus 840 ~g~~~eAa~i~l~yl----gD~e---~AI~~y~~~---~~W~eA~rLa~ 878 (1102)
.|++.+|...|.+.+ ++.+ .-..+|... +++++|+....
T Consensus 104 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~ 152 (568)
T 2vsy_A 104 AGQAEAAAAAYTRAHQLLPEEPYITAQLLNWRRRLCDWRALDVLSAQVR 152 (568)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCTTHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 999999998875532 2221 234455566 77777765443
No 293
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=88.92 E-value=0.65 Score=45.05 Aligned_cols=40 Identities=13% Similarity=0.047 Sum_probs=20.7
Q ss_pred cchHHHHhccCCcHhHHHHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 751 QLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 751 ~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
..|.+|+++ +|.. ...+...|..+...++|++|..+|.++
T Consensus 8 ~~~~~al~~--~p~~-~~~~~~~g~~~~~~g~~~~A~~~~~~a 47 (148)
T 2vgx_A 8 GTIAMLNEI--SSDT-LEQLYSLAFNQYQSGXYEDAHXVFQAL 47 (148)
T ss_dssp CSHHHHTTC--CHHH-HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHcC--CHhh-HHHHHHHHHHHHHcCChHHHHHHHHHH
Confidence 445555544 2222 233344566666666666666666544
No 294
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=88.75 E-value=13 Score=38.54 Aligned_cols=105 Identities=8% Similarity=-0.033 Sum_probs=63.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
.+++.|.|+++++.. ...|..|..+|.....+... ....+.+|++++|+.+... ......|..|..++
T Consensus 71 ~i~~~~~g~l~v~~~-------~~~i~~~d~~~~~~~~~~~~--~~~~p~~i~~~~~g~l~v~---~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 71 GLAVDGAGTVYVTDF-------NNRVVTLAAGSNNQTVLPFD--GLNYPEGLAVDTQGAVYVA---DRGNNRVVKLAAGS 138 (270)
T ss_dssp CEEECTTCCEEEEET-------TTEEEEECTTCSCCEECCCC--SCSSEEEEEECTTCCEEEE---EGGGTEEEEECTTC
T ss_pred eeEECCCCCEEEEcC-------CCEEEEEeCCCceEeeeecC--CcCCCcceEECCCCCEEEE---ECCCCEEEEEECCC
Confidence 578889999777753 34788899988665444332 1235789999999984433 23356899998776
Q ss_pred ceEEEEEEEEecc-CCCceEEecCCCCceEEEEee-CCcEEEEE
Q 001314 84 NHWYLKYEIRYLR-RDGIRFMWHPTKPLQLICWTL-DGQITTYN 125 (1102)
Q Consensus 84 YHWYLKqei~~~~-~~~~~~~W~~e~pl~L~i~t~-~g~~~~~~ 125 (1102)
...... .... .....+.+++..- |++.+. ++.+..++
T Consensus 139 ~~~~~~---~~~~~~~p~~i~~~~~g~--l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 139 KTQTVL---PFTGLNDPDGVAVDNSGN--VYVTDTDNNRVVKLE 177 (270)
T ss_dssp CSCEEC---CCCSCCSCCCEEECTTCC--EEEEEGGGTEEEEEC
T ss_pred ceeEee---ccccCCCceeEEEeCCCC--EEEEECCCCEEEEEe
Confidence 553211 1111 1123478887553 555443 34555544
No 295
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=88.24 E-value=13 Score=40.13 Aligned_cols=132 Identities=8% Similarity=-0.002 Sum_probs=63.7
Q ss_pred HHHhhhcHHHHHHHHHHc---CCCc----HHHHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHh-cccCh
Q 001314 717 IDLRLQRFENALKHIVSM---GDSY----HADCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLS-DVKCF 783 (1102)
Q Consensus 717 Id~~LkryekAl~hl~~~---g~~~----~deAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~-~~~~~ 783 (1102)
+...+|++++|...|.++ .+.. +.....+..+. +.++.|.++| .+|.. ..++..+|.... ..+++
T Consensus 108 ~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~-~~~~~A~~~~~~a~~~~p~~-~~~~~~~a~~~~~~~~~~ 185 (308)
T 2ond_A 108 YEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRA-EGIKSGRMIFKKAREDARTR-HHVYVTAALMEYYCSKDK 185 (308)
T ss_dssp HHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHH-HCHHHHHHHHHHHHTSTTCC-THHHHHHHHHHHHTSCCH
T ss_pred HHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHh-cCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHHcCCH
Confidence 333467788888777764 2111 12223334555 6677777766 13322 233333443322 25777
Q ss_pred HHHHHHHHHc----CCHHHH----HHHHHHcCCHHHHHHHHhhc----CCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 784 EDAATTYFCC----SSLEKA----MKAYRASGNWSGVLTVAGLL----KLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 784 eeAa~~Y~~a----g~~ekA----l~~y~~ag~W~~al~lA~~l----~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
++|..+|+++ .+...+ ...+...|+.++|..+-.+. .++++....+...++..+.+.|++.+|..++
T Consensus 186 ~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~~~~~~~~~g~~~~a~~~~ 264 (308)
T 2ond_A 186 SVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVE 264 (308)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 7777777765 111122 23333445555554433221 1222222345555555555556665555544
No 296
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=88.15 E-value=9 Score=43.89 Aligned_cols=59 Identities=12% Similarity=0.015 Sum_probs=45.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc---eeeeecCC--c----cccceeeeeecCCCCeEEEEEee
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE---RSSFDINE--Q----IDSTVELLKWNCMSDLLAAVVRF 70 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr---hgeF~L~~--~----~~~~v~~L~Wn~DS~iLAv~~~~ 70 (1102)
+++|.|.| +.++.+ +.+|..|...|.. ..+|..|. . .+..|..+.|.++...|++....
T Consensus 167 ~v~WSpkG-~~vg~~-------dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~ 234 (388)
T 1xip_A 167 SFDVTNSQ-LAVLLK-------DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNV 234 (388)
T ss_dssp EEEECSSE-EEEEET-------TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECC
T ss_pred EEEEcCCc-eEEEEc-------CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCC
Confidence 68999999 444443 4688999998887 66776662 1 24679999999999999987654
No 297
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=87.88 E-value=25 Score=38.18 Aligned_cols=71 Identities=7% Similarity=-0.171 Sum_probs=46.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcc--eeeeecCCc-----c-ccceeeeeecC-CCCeEEEEEeeCCCC
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLE--RSSFDINEQ-----I-DSTVELLKWNC-MSDLLAAVVRFEEYD 74 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLr--hgeF~L~~~-----~-~~~v~~L~Wn~-DS~iLAv~~~~~~~~ 74 (1102)
.+++-|.|+++++.. ..+.|..|..+|-. -..|.-++. . -....++++++ ++.++..-. ....
T Consensus 95 gia~d~~g~l~v~d~------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~--~~~~ 166 (329)
T 3fvz_A 95 GLSIDTDGNYWVTDV------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDG--YCNS 166 (329)
T ss_dssp EEEECTTSCEEEEET------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEEC--SSCC
T ss_pred EEEECCCCCEEEEEC------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeC--CCCC
Confidence 467888999877754 35789999999863 333322111 1 12478999999 787765421 1367
Q ss_pred eEEEEEcc
Q 001314 75 SVKICFFS 82 (1102)
Q Consensus 75 ~vqLWt~~ 82 (1102)
+|+.|+..
T Consensus 167 ~I~~~~~~ 174 (329)
T 3fvz_A 167 RIVQFSPS 174 (329)
T ss_dssp EEEEECTT
T ss_pred eEEEEcCC
Confidence 89999843
No 298
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=87.81 E-value=6.2 Score=48.38 Aligned_cols=152 Identities=13% Similarity=0.126 Sum_probs=94.0
Q ss_pred hhHHHhhhcHHHHHHHHHHcCCCcHHHHHHHHHH---HhcchHHHHhcc-CCcHh----HHHHHHHHHHHHhcccChHHH
Q 001314 715 YTIDLRLQRFENALKHIVSMGDSYHADCLNLMKK---YAQLFPLGLKLI-TDPAK----MEQVLEAWADHLSDVKCFEDA 786 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~g~~~~deAie~~~~---~~~Ly~~AL~L~-~d~~~----~~~i~~~yAd~L~~~~~~eeA 786 (1102)
|.+-..-|+||.|+.+|.+.. .-.|+-+..- + ++....-+|+ .++.. +-.+...|..-+ ...+..+|
T Consensus 301 f~vLlLtgqFE~AI~~L~~~~---~vdAVH~AIaL~~~-gLL~~~~~lls~~~~~~~lN~arLI~~Yt~~F-~~td~~~A 375 (661)
T 2qx5_A 301 LQTLLLSGLYGLAIDYTYTFS---EMDAVHLAIGLASL-KLFKIDSSTRLTKKPKRDIRFANILANYTKSF-RYSDPRVA 375 (661)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC---HHHHHHHHHHHHHT-TC-----------------CHHHHHHHHHTTT-TTTCHHHH
T ss_pred HHHHHHHhhHHHHHHHHHhcC---chhHHHHHHHHHHc-CCccCCCcccccCCCcccccHHHHHHHHHHHh-hcCCHHHH
Confidence 566677899999999999873 4666666542 3 4444322233 22221 234555566555 45688999
Q ss_pred HHHHHHcCCHH---------HHH-HHHHHcCCHHHHHHH-----------Hhh----cCC-C-hHHHHHHHHHHHHHHHH
Q 001314 787 ATTYFCCSSLE---------KAM-KAYRASGNWSGVLTV-----------AGL----LKL-G-KDEVAKLAQELCEELQA 839 (1102)
Q Consensus 787 a~~Y~~ag~~e---------kAl-~~y~~ag~W~~al~l-----------A~~----l~~-~-~~el~~l~~~lA~~L~~ 839 (1102)
..+|...+... +++ +.-...+.|...+-- ..+ +++ + ++.++.++...|....+
T Consensus 376 l~Y~~li~l~~g~~~~~~~~~~l~eLvletr~f~~LLG~i~~dG~r~~G~i~~~~~li~l~d~~~~~~~i~~~aA~~ae~ 455 (661)
T 2qx5_A 376 VEYLVLITLNEGPTDVELCHEALRELVLETKEFTVLLGKIGRDGARIPGVIEERQPLLHVRDEKEFLHTITEQAARRADE 455 (661)
T ss_dssp HHHHHGGGGSCCHHHHHHHHHHHHHHHHHHCCHHHHHCEECTTSCEECCHHHHTCGGGTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCchHHHHHHHHHHHHHHhcccHHHHcCCcCCCCCcCcchHHHhhcccccccHHHHHHHHHHHHHHHHHH
Confidence 98888774431 112 122345666666521 111 111 1 34567888999999999
Q ss_pred cCChHHHHHHHHHhcCCHHHHHHHHHHhcCHHHHH
Q 001314 840 LGKPGEAAKIALDYCGDVTNGISLLIDARDWEEAL 874 (1102)
Q Consensus 840 ~g~~~eAa~i~l~ylgD~e~AI~~y~~~~~W~eA~ 874 (1102)
.|++.+|..+| ..+|+++.|+++.++. -.+++
T Consensus 456 ~G~~~dAi~LY-~La~~~d~vl~lln~~--Ls~~l 487 (661)
T 2qx5_A 456 DGRIYDSILLY-QLAEEYDIVITLVNSL--LSDTL 487 (661)
T ss_dssp TTCHHHHHHHH-HHTTCHHHHHHHHHHH--HHHHH
T ss_pred CCCHHHHHHHH-HHhcCHHHHHHHHHHH--HHHHh
Confidence 99999999998 4599999999999986 35665
No 299
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=87.77 E-value=26 Score=37.48 Aligned_cols=102 Identities=7% Similarity=-0.084 Sum_probs=59.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEee-CCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRF-EEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~-~~~~~vqLWt~~ 82 (1102)
.++|.|.|+++++.. ....|..|...+-+-..+..+ ....+..|+|++|+.+++.-... .....|..|+..
T Consensus 49 ~~~~~~~g~l~~~~~------~~~~i~~~d~~~~~~~~~~~~--~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDV------FEGNIFKINPETKEIKRPFVS--HKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp EEEECTTSCEEEEET------TTCEEEEECTTTCCEEEEEEC--SSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTT
T ss_pred CcEECCCCCEEEEEC------CCCEEEEEeCCCCcEEEEeeC--CCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCC
Confidence 578999999776643 245788898876544444322 12368999999999977654310 001479999866
Q ss_pred cceEEEEEEEEe-ccCCC-ceEEecCCCCceEEEEee
Q 001314 83 NNHWYLKYEIRY-LRRDG-IRFMWHPTKPLQLICWTL 117 (1102)
Q Consensus 83 NYHWYLKqei~~-~~~~~-~~~~W~~e~pl~L~i~t~ 117 (1102)
.-.. +..+.. ..... ..+.|+|.. ++.+.+.
T Consensus 121 ~~~~--~~~~~~~~~~~~~~~i~~d~~g--~l~v~~~ 153 (333)
T 2dg1_A 121 GDNL--QDIIEDLSTAYCIDDMVFDSKG--GFYFTDF 153 (333)
T ss_dssp SCSC--EEEECSSSSCCCEEEEEECTTS--CEEEEEC
T ss_pred CCEE--EEEEccCccCCcccceEECCCC--CEEEEec
Confidence 5431 111110 11112 347888765 2455443
No 300
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=87.61 E-value=4.5 Score=47.42 Aligned_cols=26 Identities=4% Similarity=0.018 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
.++..||.++...+++++|..+|.+|
T Consensus 357 ~~~~~~~~~~~~~~~~~~A~~~~~~A 382 (530)
T 2ooe_A 357 LVYIQYMKFARRAEGIKSGRMIFKKA 382 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 36666666666666666666666655
No 301
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=87.50 E-value=0.95 Score=48.97 Aligned_cols=25 Identities=28% Similarity=0.470 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
+....+|..+...|++.+|...|.+
T Consensus 220 ~~~~~la~~l~~~g~~~~A~~~l~~ 244 (287)
T 3qou_A 220 ALATQLALQLHQVGRNEEALELLFG 244 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4566777777788888888777654
No 302
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=87.50 E-value=6.3 Score=41.55 Aligned_cols=70 Identities=7% Similarity=-0.037 Sum_probs=48.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCC-eEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYD-SVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~-~vqLWt~~ 82 (1102)
.+++-|.|+++++.. ....|..|..+|-....|..++. -..+.+|+.++|+.+++.- .... .|++|+..
T Consensus 168 ~i~~~~~g~l~v~~~------~~~~i~~~~~~g~~~~~~~~~g~-~~~p~~i~~d~~G~l~v~~---~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 168 GVVVNDKQEIFISDN------RAHCVKVFNYEGQYLRQIGGEGI-TNYPIGVGINSNGEILIAD---NHNNFNLTIFTQD 237 (286)
T ss_dssp EEEECSSSEEEEEEG------GGTEEEEEETTCCEEEEESCTTT-SCSEEEEEECTTCCEEEEE---CSSSCEEEEECTT
T ss_pred EEEECCCCCEEEEEC------CCCEEEEEcCCCCEEEEEccCCc-cCCCcEEEECCCCCEEEEe---CCCCEEEEEECCC
Confidence 477888898777754 24689999999876666654321 1357899999999876653 2233 89999865
Q ss_pred c
Q 001314 83 N 83 (1102)
Q Consensus 83 N 83 (1102)
.
T Consensus 238 g 238 (286)
T 1q7f_A 238 G 238 (286)
T ss_dssp S
T ss_pred C
Confidence 4
No 303
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=87.23 E-value=1.2 Score=39.66 Aligned_cols=20 Identities=20% Similarity=0.102 Sum_probs=9.1
Q ss_pred HHHHHHHHHcCChHHHHHHH
Q 001314 831 QELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 831 ~~lA~~L~~~g~~~eAa~i~ 850 (1102)
..+|..+...|++.+|..++
T Consensus 47 ~~la~~~~~~~~~~~A~~~~ 66 (125)
T 1na0_A 47 YNLGNAYYKQGDYDEAIEYY 66 (125)
T ss_dssp HHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHH
Confidence 33444444444444444444
No 304
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=87.22 E-value=23 Score=40.02 Aligned_cols=59 Identities=14% Similarity=0.198 Sum_probs=37.2
Q ss_pred ceeecc---CCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEE
Q 001314 4 VLEWMP---SGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVV 68 (1102)
Q Consensus 4 ~LsWrP---sGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~ 68 (1102)
.+++.| .|.+||+.. .+..|.+|+-. |-.-..|.-....-..|..+++++||.++++..
T Consensus 183 ~l~fs~~~g~~~~LaSgS------~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTT------IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp EEEEEEEETSTTEEEEEE------TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred eEEeeccCCCCceEEEec------CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 356666 446777765 36789999865 655455532211112477778999999987754
No 305
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=87.19 E-value=6.7 Score=43.58 Aligned_cols=101 Identities=8% Similarity=-0.011 Sum_probs=58.9
Q ss_pred hhHHHhhhcHHHHHHHHHHc-CCC---cH----HHHHHHHHHHhcchHHHHhcc-----CCc-------HhHHHHHHHHH
Q 001314 715 YTIDLRLQRFENALKHIVSM-GDS---YH----ADCLNLMKKYAQLFPLGLKLI-----TDP-------AKMEQVLEAWA 774 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~-g~~---~~----deAie~~~~~~~Ly~~AL~L~-----~d~-------~~~~~i~~~yA 774 (1102)
..|..+.|++++|++++.+. +.. .. -.++.+..+. +-.+.|.+++ .+| ...-.+.+.|-
T Consensus 107 a~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~-~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v 185 (310)
T 3mv2_B 107 ATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLN-NNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYI 185 (310)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHC-CCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHH
Confidence 46666788888888888876 211 12 2334445565 6777777776 244 22345556666
Q ss_pred HHHhcccChHHHHHHHHHcC----C---HHHHHHHHHHcCCHHHHHHHH
Q 001314 775 DHLSDVKCFEDAATTYFCCS----S---LEKAMKAYRASGNWSGVLTVA 816 (1102)
Q Consensus 775 d~L~~~~~~eeAa~~Y~~ag----~---~ekAl~~y~~ag~W~~al~lA 816 (1102)
..+...+++.+|..+|..+. . ..-.+.++...|+|.+|..+.
T Consensus 186 ~l~~g~~~~q~A~~~f~El~~~~p~~~~~~lLln~~~~~g~~~eAe~~L 234 (310)
T 3mv2_B 186 KFATNKETATSNFYYYEELSQTFPTWKTQLGLLNLHLQQRNIAEAQGIV 234 (310)
T ss_dssp HHHHTCSTTTHHHHHHHHHHTTSCSHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHhCCccHHHHHHHHHHHHHhCCCcccHHHHHHHHHHcCCHHHHHHHH
Confidence 66666667888877776652 1 112233555555555554443
No 306
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=87.12 E-value=2.5 Score=45.58 Aligned_cols=24 Identities=25% Similarity=0.156 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
.....++..|...|+..+|...|-
T Consensus 256 ~a~~~l~~~~~~~g~~~~a~~~~r 279 (287)
T 3qou_A 256 QTRXTFQEILAALGTGDALASXYR 279 (287)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCCcHHHHHH
Confidence 356667778888888888877663
No 307
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=87.08 E-value=2.3 Score=39.13 Aligned_cols=22 Identities=14% Similarity=-0.165 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...|
T Consensus 79 ~~~~l~~~~~~~~~~~~A~~~~ 100 (137)
T 3q49_B 79 AHFFLGQCQLEMESYDEAIANL 100 (137)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHH
Confidence 3444455555555555544443
No 308
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=87.02 E-value=0.73 Score=53.74 Aligned_cols=20 Identities=20% Similarity=0.222 Sum_probs=10.8
Q ss_pred HHHHHHHcCCHHHHHHHHHH
Q 001314 786 AATTYFCCSSLEKAMKAYRA 805 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ 805 (1102)
-+.+|.+.|++++|+++|.+
T Consensus 323 la~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 323 LAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCHHHHHHHHHH
Confidence 34455555556655555543
No 309
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=87.00 E-value=1.2 Score=39.18 Aligned_cols=22 Identities=18% Similarity=0.060 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...+
T Consensus 74 ~~~~~a~~~~~~~~~~~A~~~~ 95 (118)
T 1elw_A 74 GYSRKAAALEFLNRFEEAKRTY 95 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHH
Confidence 3444444444555555554444
No 310
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=86.99 E-value=0.51 Score=52.60 Aligned_cols=52 Identities=13% Similarity=0.010 Sum_probs=25.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
-+.+|.+.|++++|+++|.+ ++.+. +.. ...+..+|..+...|+|.+|...|
T Consensus 202 la~~~~~~g~~~~A~~~~~~------al~~~------p~~-~~a~~~lg~~~~~~g~~~~A~~~~ 253 (336)
T 1p5q_A 202 LAMCHLKLQAFSAAIESCNK------ALELD------SNN-EKGLSRRGEAHLAVNDFELARADF 253 (336)
T ss_dssp HHHHHHHTTCHHHHHHHHHH------HHHHC------TTC-HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH------HHHhC------CCc-HHHHHHHHHHHHHCCCHHHHHHHH
Confidence 34455556666666666544 33321 111 134455565665566666555544
No 311
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=86.97 E-value=1.9 Score=52.90 Aligned_cols=109 Identities=15% Similarity=0.149 Sum_probs=72.1
Q ss_pred HhHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCC---C-----hHHHHHHHHHHHH
Q 001314 764 AKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKL---G-----KDEVAKLAQELCE 835 (1102)
Q Consensus 764 ~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~---~-----~~el~~l~~~lA~ 835 (1102)
+..+.|...-|+..+++|++++|..+|..||+|++|++...++- .+++.... ++. . .+++..++..+.+
T Consensus 440 ~~~~~i~~~aA~~ae~~G~~~dAi~LY~La~~~d~vl~lln~~L--s~~l~~~~-~~~~~~~~~~~~~~~l~~la~~i~~ 516 (661)
T 2qx5_A 440 EFLHTITEQAARRADEDGRIYDSILLYQLAEEYDIVITLVNSLL--SDTLSASD-LDQPLVGPDDNSETNPVLLARRMAS 516 (661)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHH--HHHHHHSC-TTSCSSCSSCCTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHhcCHHHHHHHHHHHH--HHHhcccc-cccccccccccccccHHHHHHHHHH
Confidence 34667888899999999999999999999999999999987632 12332111 111 0 1356778888888
Q ss_pred HHHHcCC--------hHHHHHHHHHhcCCHHHHHHHHHHhcCHHHHHHHHHhc
Q 001314 836 ELQALGK--------PGEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMH 880 (1102)
Q Consensus 836 ~L~~~g~--------~~eAa~i~l~ylgD~e~AI~~y~~~~~W~eA~rLa~~h 880 (1102)
.+...+. -.++-.++++ +-.+-+. ...++|++|+....+-
T Consensus 517 ~y~~~~~~~~~~~~~~~~t~~lLl~----l~~f~~~-~~~g~~~~AL~~i~~L 564 (661)
T 2qx5_A 517 IYFDNAGISRQIHVKNKEICMLLLN----ISSIREL-YFNKQWQETLSQMELL 564 (661)
T ss_dssp HHTTCHHHHTTSCHHHHHHHHHHHH----HHHHHHH-HHTTCHHHHHHHHHHT
T ss_pred HHhcCchhhhhccHHHHHHHHHHHH----HHHHHHH-HHcCCHHHHHHHHHhC
Confidence 8775422 2234444333 3333333 5678899999877764
No 312
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=86.81 E-value=2.1 Score=38.48 Aligned_cols=22 Identities=9% Similarity=-0.076 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...|
T Consensus 81 ~~~~la~~~~~~~~~~~A~~~~ 102 (131)
T 1elr_A 81 AYARIGNSYFKEEKYKDAIHFY 102 (131)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHH
Confidence 3444444444444444444443
No 313
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=86.70 E-value=65 Score=39.16 Aligned_cols=75 Identities=9% Similarity=0.046 Sum_probs=46.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCC----------C
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEE----------Y 73 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~----------~ 73 (1102)
.++|.|.|++||-+....+ .+..+|.+++=.+-+.-.-.++ +.+...++|+ ||+-|+.....+. .
T Consensus 133 ~~~~SpDg~~lAy~~~~~G-~~~~~i~v~dl~tg~~~~~~~~---~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 133 QLSFSRDGRILAYSLSLAG-SDWREIHLMDVESKQPLETPLK---DVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEECTTSSEEEEEEECSS-CCEEEEEEEETTTCSEEEEEEE---EEESCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEECCCCCEEEEEEecCC-CceEEEEEEECCCCCCCccccC---CceeccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 4689999999998766532 2346777777554322111222 1224678999 9999998864321 2
Q ss_pred CeEEEEEccc
Q 001314 74 DSVKICFFSN 83 (1102)
Q Consensus 74 ~~vqLWt~~N 83 (1102)
..|.+|..+.
T Consensus 208 ~~v~~~~lgt 217 (693)
T 3iuj_A 208 HKVYFHRLGT 217 (693)
T ss_dssp CEEEEEETTS
T ss_pred cEEEEEECCC
Confidence 3466776554
No 314
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=86.36 E-value=1.6 Score=50.82 Aligned_cols=23 Identities=0% Similarity=-0.149 Sum_probs=11.5
Q ss_pred HHHHHHHHHhcccChHHHHHHHH
Q 001314 769 VLEAWADHLSDVKCFEDAATTYF 791 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~ 791 (1102)
.+...|.-+..+|+|++|..+|.
T Consensus 384 ~l~nLa~~~~~qg~~~eA~~~~~ 406 (433)
T 3qww_A 384 MWLKLGRLYMGLENKAAGEKALK 406 (433)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhccCHHHHHHHHH
Confidence 34445555555555555554443
No 315
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=86.28 E-value=21 Score=41.14 Aligned_cols=156 Identities=8% Similarity=-0.083 Sum_probs=79.0
Q ss_pred cCCcchhhHHHHHHhcCChh---hhchhHHHh----hhcHHHHHHHHHHcCC-CcHHHHHHH---HHH----HhcchHHH
Q 001314 692 QRDPKEFLPYLQELESMPPL---LMRYTIDLR----LQRFENALKHIVSMGD-SYHADCLNL---MKK----YAQLFPLG 756 (1102)
Q Consensus 692 qkDPkEYLpfL~~L~~le~~---~rr~~Id~~----LkryekAl~hl~~~g~-~~~deAie~---~~~----~~~Ly~~A 756 (1102)
++|+.+=+.++++.-..... +.-..+... .+++++|+.+|.++-+ ...+-...+ +.. . +.+++|
T Consensus 128 ~~~~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~~~~a~~~Lg~~y~~g~g~~-~~~~~A 206 (490)
T 2xm6_A 128 KVDKAESVKWFRLAAEQGRDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQGNVWSCNQLGYMYSRGLGVE-RNDAIS 206 (490)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSC-CCHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCC-cCHHHH
Confidence 34555556666665554221 111223222 5689999999986521 112211111 222 3 788888
Q ss_pred HhccC--CcHhHHHHHHHHHHHHhc----ccChHHHHHHHHHcC---CHHH---HHHHHHH----cCCHHHHHHHHhhc-
Q 001314 757 LKLIT--DPAKMEQVLEAWADHLSD----VKCFEDAATTYFCCS---SLEK---AMKAYRA----SGNWSGVLTVAGLL- 819 (1102)
Q Consensus 757 L~L~~--d~~~~~~i~~~yAd~L~~----~~~~eeAa~~Y~~ag---~~ek---Al~~y~~----ag~W~~al~lA~~l- 819 (1102)
+++|. -.......+...|..+.. .+++++|..+|.++- +.+- .-.+|.. .+++++|+..-++.
T Consensus 207 ~~~~~~a~~~~~~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~y~~g~~~~~d~~~A~~~~~~a~ 286 (490)
T 2xm6_A 207 AQWYRKSATSGDELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQGNSIAQFRLGYILEQGLAGAKEPLKALEWYRKSA 286 (490)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Confidence 88871 000112345556666664 788999998888762 2211 1133444 45666665443321
Q ss_pred CCChHHHHHHHHHHHHHHHHc-----CChHHHHHHHH
Q 001314 820 KLGKDEVAKLAQELCEELQAL-----GKPGEAAKIAL 851 (1102)
Q Consensus 820 ~~~~~el~~l~~~lA~~L~~~-----g~~~eAa~i~l 851 (1102)
..+. .+....++..+... +++.+|...|.
T Consensus 287 ~~~~---~~a~~~Lg~~y~~~~~g~~~~~~~A~~~~~ 320 (490)
T 2xm6_A 287 EQGN---SDGQYYLAHLYDKGAEGVAKNREQAISWYT 320 (490)
T ss_dssp TTTC---HHHHHHHHHHHHHCBTTBCCCHHHHHHHHH
T ss_pred HcCC---HHHHHHHHHHHHcCCCCCcCCHHHHHHHHH
Confidence 1111 12344455555554 56666666553
No 316
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=86.25 E-value=1.4 Score=42.72 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
++..+|..+...|+|.+|...+
T Consensus 65 ~~~nla~~~~~~~~~~~A~~~~ 86 (162)
T 3rkv_A 65 LYANMSQCYLNIGDLHEAEETS 86 (162)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHH
Confidence 4444555555555555555444
No 317
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=86.13 E-value=2.5 Score=41.58 Aligned_cols=25 Identities=28% Similarity=0.432 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.....+|..+...|++.+|...|.+
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~ 133 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWN 133 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4556667777777777777777644
No 318
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=85.99 E-value=0.76 Score=44.55 Aligned_cols=97 Identities=12% Similarity=0.112 Sum_probs=58.3
Q ss_pred hcCCcchhhHHHHHHhcCChh-----hhchhHHHhhhcHHHHHHHHHHc---CCCcH----HHHHHHHHHHhcchHHHHh
Q 001314 691 SQRDPKEFLPYLQELESMPPL-----LMRYTIDLRLQRFENALKHIVSM---GDSYH----ADCLNLMKKYAQLFPLGLK 758 (1102)
Q Consensus 691 sqkDPkEYLpfL~~L~~le~~-----~rr~~Id~~LkryekAl~hl~~~---g~~~~----deAie~~~~~~~Ly~~AL~ 758 (1102)
++.|..+.+..+++.-..++. +.-+.+...+|+|++|+.+|.++ .++.. ..+.- .... +.|++|+.
T Consensus 9 ~~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~-~~~~-~~~~~A~~ 86 (150)
T 4ga2_A 9 SKADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLL-YELE-ENTDKAVE 86 (150)
T ss_dssp CHHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHT-TCHHHHHH
T ss_pred HcChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH-HHHc-CchHHHHH
Confidence 456666677777766666432 23346667789999999999875 33322 22222 2455 78888888
Q ss_pred cc-----CCcHhHHHHHHHHHHHHhcccChHHHHHHH
Q 001314 759 LI-----TDPAKMEQVLEAWADHLSDVKCFEDAATTY 790 (1102)
Q Consensus 759 L~-----~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y 790 (1102)
.| .+|.. ..++..+|..+...+++++|+..|
T Consensus 87 ~~~~al~~~p~~-~~~~~~la~~~~~~~~~~~aa~~~ 122 (150)
T 4ga2_A 87 CYRRSVELNPTQ-KDLVLKIAELLCKNDVTDGRAKYW 122 (150)
T ss_dssp HHHHHHHHCTTC-HHHHHHHHHHHHHHCSSSSHHHHH
T ss_pred HHHHHHHhCCCC-HHHHHHHHHHHHHcCChHHHHHHH
Confidence 77 24432 234555666666666665555544
No 319
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=85.82 E-value=1.8 Score=52.68 Aligned_cols=60 Identities=27% Similarity=0.350 Sum_probs=39.9
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccc----------------cceeeeeecCCCCeEEE
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQID----------------STVELLKWNCMSDLLAA 66 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~----------------~~v~~L~Wn~DS~iLAv 66 (1102)
..++|.|.|+.||.+. +.+|.+++-.+-+.-.++..+... .....+.|++||+.||.
T Consensus 113 ~~~~~SPDG~~la~~~-------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 113 QYLCWSPVGSKLAYVY-------QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp CCEEECSSTTCEEEEE-------TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred ccceECCCCCEEEEEE-------CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 3579999999999985 247888877553322222222111 11258999999999998
Q ss_pred EEe
Q 001314 67 VVR 69 (1102)
Q Consensus 67 ~~~ 69 (1102)
...
T Consensus 186 ~~~ 188 (719)
T 1z68_A 186 AEF 188 (719)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 320
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=85.81 E-value=3.5 Score=40.39 Aligned_cols=25 Identities=20% Similarity=0.162 Sum_probs=14.9
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHc
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
++...|.-+...++|++|...|.++
T Consensus 72 ~~~~lg~~~~~~g~~~~Ai~~~~~a 96 (151)
T 3gyz_A 72 YIMGLAAIYQIKEQFQQAADLYAVA 96 (151)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHH
Confidence 4445566666666666666666555
No 321
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=85.73 E-value=3.4 Score=45.52 Aligned_cols=80 Identities=15% Similarity=0.045 Sum_probs=44.7
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeee-ecCCccc--cceeeeeecCCCCeEEEEEee------CCCCe
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSF-DINEQID--STVELLKWNCMSDLLAAVVRF------EEYDS 75 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF-~L~~~~~--~~v~~L~Wn~DS~iLAv~~~~------~~~~~ 75 (1102)
.+|.|.|+.||......+ .....|..++-.+-+...+ .++.... .....+.|++||..|++.... .....
T Consensus 243 ~~~spdg~~l~~~~~~~~-~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 321 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKG-SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPF 321 (388)
T ss_dssp EEECTTSSCEEEEEEETT-CCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCE
T ss_pred ceECCCCCEEEEEecCCC-CCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCE
Confidence 689999998877654321 1122488888765443222 2222000 012345799999999987532 33457
Q ss_pred EEEEEcccce
Q 001314 76 VKICFFSNNH 85 (1102)
Q Consensus 76 vqLWt~~NYH 85 (1102)
|.+|....-.
T Consensus 322 i~~~d~~~~~ 331 (388)
T 3pe7_A 322 LYVFNMKNGT 331 (388)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeccCCc
Confidence 9999987754
No 322
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=85.59 E-value=27 Score=37.98 Aligned_cols=96 Identities=11% Similarity=-0.092 Sum_probs=58.7
Q ss_pred CceeeccC-CCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 3 AVLEWMPS-GANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 3 ~~LsWrPs-GnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
....|.|. |.++.+.. ....|..|..+|-+...+.++. .+..+.|++|+.+++.. .+.|.+|+.
T Consensus 52 egp~~~~~~~~l~~~d~------~~~~i~~~d~~~~~~~~~~~~~----~v~~i~~~~dg~l~v~~-----~~gl~~~d~ 116 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNI------LERELHELHLASGRKTVHALPF----MGSALAKISDSKQLIAS-----DDGLFLRDT 116 (326)
T ss_dssp EEEEEETTTTEEEEEEG------GGTEEEEEETTTTEEEEEECSS----CEEEEEEEETTEEEEEE-----TTEEEEEET
T ss_pred cCCeEeCCCCEEEEEEC------CCCEEEEEECCCCcEEEEECCC----cceEEEEeCCCeEEEEE-----CCCEEEEEC
Confidence 35789996 45555533 1357888988876665666553 68899999999977653 346888987
Q ss_pred ccceEEEEEEEEeccCC---C-ceEEecCCCCceEEEEee
Q 001314 82 SNNHWYLKYEIRYLRRD---G-IRFMWHPTKPLQLICWTL 117 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~---~-~~~~W~~e~pl~L~i~t~ 117 (1102)
.+-.+ +.-....... . ..+.||+... +.+++.
T Consensus 117 ~~g~~--~~~~~~~~~~~~~~~~~i~~d~~G~--l~v~~~ 152 (326)
T 2ghs_A 117 ATGVL--TLHAELESDLPGNRSNDGRMHPSGA--LWIGTM 152 (326)
T ss_dssp TTCCE--EEEECSSTTCTTEEEEEEEECTTSC--EEEEEE
T ss_pred CCCcE--EEEeeCCCCCCCCCCCCEEECCCCC--EEEEeC
Confidence 65542 1111111111 1 2478888653 455453
No 323
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=85.20 E-value=6.8 Score=45.63 Aligned_cols=91 Identities=15% Similarity=0.281 Sum_probs=60.6
Q ss_pred HHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHH-HHHcCCh------HHHHHHHHHhcCCHHHHH
Q 001314 789 TYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEE-LQALGKP------GEAAKIALDYCGDVTNGI 861 (1102)
Q Consensus 789 ~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~-L~~~g~~------~eAa~i~l~ylgD~e~AI 861 (1102)
-+...|+.++|+++..+.+.|-+|+-||... +++.+..+..+++.. +. .+.. .-...+|.-+.|+.+.+|
T Consensus 159 ~~Ll~G~~e~Av~~al~~~lwa~ALlLAs~~--g~e~~~~V~~~y~~~~~~-~~~~~~~~~~~~Lr~Ly~v~sGn~~~~V 235 (441)
T 3mzk_B 159 AFLQTGNHDEALRLALSKRDYAIALLVGSLM--GKDRWSEVIQKYLYEGFT-AGPNDQKELAHFLLLIFQVFVGNSKMAI 235 (441)
T ss_dssp HHHHTTCHHHHHHHHHHTTCHHHHHHHHHTS--CHHHHHHHHHHHHHCC-------CTHHHHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHcCCHHHHHHHHHhCCcHHHHHHHHHhc--CHHHHHHHHHHHHHhhcc-cCCccccccccHHHHHHHHHcCCHHHHH
Confidence 3456799999999999999999999999765 454444444433331 11 1111 112356655689999999
Q ss_pred HHHH--------HhcCHHHHHHHHHhcCC
Q 001314 862 SLLI--------DARDWEEALRVAFMHRR 882 (1102)
Q Consensus 862 ~~y~--------~~~~W~eA~rLa~~h~~ 882 (1102)
..+. ...+|.+.+.++-.+..
T Consensus 236 ~~l~~~~~~~~~~l~~Wre~lA~IlsN~~ 264 (441)
T 3mzk_B 236 KSFYTNNETSQWASENWKSIVAAVLINIP 264 (441)
T ss_dssp HHHHHCHHHHHHHHHSHHHHHHHHHHTSC
T ss_pred HHhccCCccccchHhHHHHHHHHHHhCCC
Confidence 9773 34589999887766543
No 324
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=85.10 E-value=4.4 Score=40.65 Aligned_cols=59 Identities=19% Similarity=0.133 Sum_probs=35.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCC----ChH-HHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKL----GKD-EVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~----~~~-el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
-+..+...|+|++|+++|.+ |+.+....+. ... ........++..|...|+|.+|...|
T Consensus 17 ~G~~l~~~g~~eeAi~~Y~k------AL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~ 80 (159)
T 2hr2_A 17 DAQRQLVAGEYDEAAANCRR------AMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSA 80 (159)
T ss_dssp HHHHHHHHTCHHHHHHHHHH------HHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHH------HHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 34455566777778877654 5555433110 110 11236677788888888888887776
No 325
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.96 E-value=1.5 Score=40.81 Aligned_cols=22 Identities=18% Similarity=0.145 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...|
T Consensus 101 ~~~~~a~~~~~~~~~~~A~~~~ 122 (148)
T 2dba_A 101 ALYRRSQALEKLGRLDQAVLDL 122 (148)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHH
Confidence 3344444554555555554443
No 326
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=84.95 E-value=2.8 Score=48.76 Aligned_cols=26 Identities=8% Similarity=-0.046 Sum_probs=15.0
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
.++..+|.-+...++|++|..+|.++
T Consensus 318 ~~~~nla~~~~~~g~~~~A~~~~~~a 343 (457)
T 1kt0_A 318 AAFLNLAMCYLKLREYTKAVECCDKA 343 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34445556666666666666665554
No 327
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=84.51 E-value=2.2 Score=38.14 Aligned_cols=20 Identities=25% Similarity=0.147 Sum_probs=8.5
Q ss_pred HHHHHHHHHHcCChHHHHHH
Q 001314 830 AQELCEELQALGKPGEAAKI 849 (1102)
Q Consensus 830 ~~~lA~~L~~~g~~~eAa~i 849 (1102)
...+|..+...|++.+|...
T Consensus 83 ~~~~~~~~~~~~~~~~A~~~ 102 (131)
T 2vyi_A 83 YGRMGLALSSLNKHVEAVAY 102 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHH
Confidence 33344444444444444443
No 328
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=84.38 E-value=1.6 Score=39.65 Aligned_cols=22 Identities=14% Similarity=0.042 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...|
T Consensus 86 ~~~~la~~~~~~~~~~~A~~~~ 107 (133)
T 2lni_A 86 GYTRKAAALEAMKDYTKAMDVY 107 (133)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHHHHHHH
Confidence 3444444444455555554443
No 329
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=84.10 E-value=1.9 Score=40.90 Aligned_cols=19 Identities=21% Similarity=0.004 Sum_probs=8.0
Q ss_pred HHHHHHHHHcCChHHHHHH
Q 001314 831 QELCEELQALGKPGEAAKI 849 (1102)
Q Consensus 831 ~~lA~~L~~~g~~~eAa~i 849 (1102)
..+|..+...|++.+|...
T Consensus 90 ~~lg~~~~~~g~~~~A~~~ 108 (142)
T 2xcb_A 90 FHAAECHLQLGDLDGAESG 108 (142)
T ss_dssp HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHH
Confidence 3344444444444444443
No 330
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.44 E-value=9.2 Score=35.11 Aligned_cols=50 Identities=20% Similarity=0.071 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHhc----CCHH---HHHHHHHHhcCHHHHHHH
Q 001314 827 AKLAQELCEELQALGKPGEAAKIALDYC----GDVT---NGISLLIDARDWEEALRV 876 (1102)
Q Consensus 827 ~~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~e---~AI~~y~~~~~W~eA~rL 876 (1102)
......+|..+...|+|.+|...+.+.+ .++. ....+|...++|++|+..
T Consensus 65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~ 121 (148)
T 2dba_A 65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVLD 121 (148)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4566667777777778877777664321 1211 123345555555555543
No 331
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=83.29 E-value=2.9 Score=45.03 Aligned_cols=51 Identities=16% Similarity=-0.031 Sum_probs=30.7
Q ss_pred HHHHHcCCHHHHHHHHhh-cCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 801 KAYRASGNWSGVLTVAGL-LKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 801 ~~y~~ag~W~~al~lA~~-l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.+|...|+|++|+....+ +..+++. ......+|..+...|++.+|...|.+
T Consensus 46 ~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~~g~~~~A~~~~~~ 97 (281)
T 2c2l_A 46 LCYLKMQQPEQALADCRRALELDGQS-VKAHFFLGQCQLEMESYDEAIANLQR 97 (281)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTSCTTC-HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344444555555444332 1222222 24667788899999999999988755
No 332
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=82.84 E-value=92 Score=37.70 Aligned_cols=62 Identities=8% Similarity=-0.037 Sum_probs=39.8
Q ss_pred ceeeeeecCCCCeEEEEEeeCCCC--eEEEEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEe
Q 001314 51 TVELLKWNCMSDLLAAVVRFEEYD--SVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWT 116 (1102)
Q Consensus 51 ~v~~L~Wn~DS~iLAv~~~~~~~~--~vqLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t 116 (1102)
.+..++||+||+.||........+ .|.+|....-...- +.........+.|+|.... |++.+
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~---~~~~~~~~~~~~wspDg~~-l~~~~ 189 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP---DVLERVKFSCMAWTHDGKG-MFYNA 189 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE---EEEEEECSCCEEECTTSSE-EEEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCc---ccccCcccceEEEEeCCCE-EEEEE
Confidence 578899999999999998655454 79999987766421 1111111123788876543 44433
No 333
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=82.70 E-value=61 Score=37.88 Aligned_cols=186 Identities=11% Similarity=0.055 Sum_probs=103.1
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEE-------e-------
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVV-------R------- 69 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~-------~------- 69 (1102)
+.--|.| ++.++--.+.++....|++++-. +-..|....+...+..--++-|++|.+++-+-- +
T Consensus 143 ~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~ 221 (462)
T 2ece_A 143 VHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEH 221 (462)
T ss_dssp EEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTT
T ss_pred eeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhh
Confidence 3455889 44444322223346789999966 677787765532222234688999999554431 0
Q ss_pred --eCCCCeEEEEEcccceEEEEEEEEeccCCC----ceEEecCCCCceEEEEee------CCcEEEEEEEEeeeecCCcE
Q 001314 70 --FEEYDSVKICFFSNNHWYLKYEIRYLRRDG----IRFMWHPTKPLQLICWTL------DGQITTYNFIWTTAVMENST 137 (1102)
Q Consensus 70 --~~~~~~vqLWt~~NYHWYLKqei~~~~~~~----~~~~W~~e~pl~L~i~t~------~g~~~~~~~~w~~~~~d~~~ 137 (1102)
....++|.+|..... =+++.|..+.... +.|.+||.... +++++. ++++..+.+. ...-..
T Consensus 222 ~~~~~~d~V~v~D~~~~--k~~~tI~vg~~g~~P~~i~f~~~Pdg~~-aYV~~e~~~~~Lss~V~v~~~d----~g~~~~ 294 (462)
T 2ece_A 222 LKDRYGNRIHFWDLRKR--KRIHSLTLGEENRMALELRPLHDPTKLM-GFINMVVSLKDLSSSIWLWFYE----DGKWNA 294 (462)
T ss_dssp HHHHSCCEEEEEETTTT--EEEEEEESCTTEEEEEEEEECSSTTCCE-EEEEEEEETTTCCEEEEEEEEE----TTEEEE
T ss_pred hhhccCCEEEEEECCCC--cEeeEEecCCCCCccceeEeeECCCCCE-EEEEEeeeccCCCceEEEEEec----CCceeE
Confidence 023689999999874 4788888763221 33556998876 666453 3455544432 111123
Q ss_pred EEEEeCCeEEeccCCCCCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCCCc
Q 001314 138 ALVIDGSKILVTPLSLSLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAPDM 204 (1102)
Q Consensus 138 vaVIDG~~l~lTp~r~a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~~~ 204 (1102)
..|||=.+..++. .+| +|---.-..+..+.+|.+|++.. ..++.-...+++.+|...++.+
T Consensus 295 ~~vIdi~~~~v~~----~lp-~~~~~f~~~~~~pa~I~lS~DGr-fLYVSnrg~d~VavfdV~d~~~ 355 (462)
T 2ece_A 295 EKVIEIPAEPLEG----NLP-EILKPFKAVPPLVTDIDISLDDK-FLYLSLWGIGEVRQYDISNPFK 355 (462)
T ss_dssp EEEEEECCEECCS----SCC-GGGGGGTEECCCCCCEEECTTSC-EEEEEETTTTEEEEEECSSTTS
T ss_pred EEEEeCCCccccc----ccc-ccccccccCCCceeEEEECCCCC-EEEEEeCCCCEEEEEEecCCCC
Confidence 4567633333332 233 22210011233456788888754 2333335567899998764433
No 334
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=82.59 E-value=6.8 Score=36.57 Aligned_cols=77 Identities=19% Similarity=0.201 Sum_probs=41.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc----CCHH---
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC----GDVT--- 858 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~e--- 858 (1102)
-+..|.+.|+|++|+++|.+ ++.+- +.. ......+|..+...|++.+|...|.+-+ ++++
T Consensus 19 ~G~~~~~~g~~~~A~~~~~~------al~~~---p~~----~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~ 85 (126)
T 4gco_A 19 KGNEYFKKGDYPTAMRHYNE------AVKRD---PEN----AILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYI 85 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHH------HHHHC---TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH------HHHhC---CCC----HHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHH
Confidence 34555666666666666654 33321 111 2456667777777777777777664321 1111
Q ss_pred HHHHHHHHhcCHHHHHH
Q 001314 859 NGISLLIDARDWEEALR 875 (1102)
Q Consensus 859 ~AI~~y~~~~~W~eA~r 875 (1102)
.--.+|...++|++|+.
T Consensus 86 ~lg~~~~~~~~~~~A~~ 102 (126)
T 4gco_A 86 RKAACLVAMREWSKAQR 102 (126)
T ss_dssp HHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHCCCHHHHHH
Confidence 12334555666666654
No 335
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=82.58 E-value=1.4 Score=41.75 Aligned_cols=23 Identities=17% Similarity=0.202 Sum_probs=13.6
Q ss_pred hhchhHHHhhhcHHHHHHHHHHc
Q 001314 712 LMRYTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~ 734 (1102)
.....+....|+|++|+.+|.++
T Consensus 17 ~~~a~~~~~~~~~~~A~~~~~~a 39 (166)
T 1a17_A 17 KTQANDYFKAKDYENAIKFYSQA 39 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHH
Confidence 34445555567777777666653
No 336
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=82.42 E-value=2.3 Score=38.52 Aligned_cols=25 Identities=16% Similarity=0.131 Sum_probs=13.0
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHc
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
++..+|.-+...++|++|..+|.++
T Consensus 52 ~~~~la~~~~~~~~~~~A~~~~~~a 76 (133)
T 2lni_A 52 LYSNRAACYTKLLEFQLALKDCEEC 76 (133)
T ss_dssp HHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHH
Confidence 3444555555555555555555543
No 337
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=82.23 E-value=1.6 Score=38.05 Aligned_cols=22 Identities=23% Similarity=0.219 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHc-CChHHHHHHH
Q 001314 829 LAQELCEELQAL-GKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~-g~~~eAa~i~ 850 (1102)
....+|..+... |++.+|.+.+
T Consensus 78 ~~~~l~~~~~~~~~~~~~A~~~~ 100 (112)
T 2kck_A 78 VWAAKADALRYIEGKEVEAEIAE 100 (112)
T ss_dssp HHHHHHHHHTTCSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHH
Confidence 344444444444 4555444443
No 338
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=82.11 E-value=4.3 Score=44.55 Aligned_cols=24 Identities=17% Similarity=0.126 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
+....+|-.|.+.|+..+|..+|-
T Consensus 209 da~~~~glaL~~lGr~deA~~~l~ 232 (282)
T 4f3v_A 209 AIAWYLAMARRSQGNESAAVALLE 232 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHH
Confidence 455667778888888888888773
No 339
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=81.91 E-value=3.2 Score=46.07 Aligned_cols=80 Identities=13% Similarity=-0.025 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHcCC----HH----HHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHH
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCCSS----LE----KAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQ 838 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~ag~----~e----kAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~ 838 (1102)
.++..+|.-+...++|++|..+|.++-. .. ..-.+|...|+|++|+....+. .+.++. ......++..+.
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-~~a~~~l~~~~~ 275 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNN-KAAKTQLAVCQQ 275 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHH
Confidence 4555666777777777777777766521 11 1224555666666665443221 111111 235556666666
Q ss_pred HcCChHHHHH
Q 001314 839 ALGKPGEAAK 848 (1102)
Q Consensus 839 ~~g~~~eAa~ 848 (1102)
..|++.+|.+
T Consensus 276 ~~~~~~~a~~ 285 (336)
T 1p5q_A 276 RIRRQLAREK 285 (336)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6777777644
No 340
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=81.87 E-value=3.6 Score=47.82 Aligned_cols=108 Identities=16% Similarity=0.167 Sum_probs=66.4
Q ss_pred cCCCeEEEEeeccCCCCCCeEEEEecCCcceeeee-------cCCcc--c-cceeeeeecCCCCeEEEEEeeCCCCeEEE
Q 001314 9 PSGANIAAVYDRKSENKCPSIVFYERNGLERSSFD-------INEQI--D-STVELLKWNCMSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 9 PsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~-------L~~~~--~-~~v~~L~Wn~DS~iLAv~~~~~~~~~vqL 78 (1102)
+|+.++.++. +..+|+|+..|=+|-.... |..+. . ..|..|.=|++|+.|||+.+ +.|.+
T Consensus 21 ~s~R~~~~~~------n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~----~~V~V 90 (452)
T 3pbp_A 21 QSPRYIFSSQ------NGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND----NEIFV 90 (452)
T ss_dssp -CCEEEEEET------TTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS----SEEEE
T ss_pred CCCcEEEEEc------CCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC----CeEEE
Confidence 4555554433 4679999999999976544 22221 2 25788999999999999852 23333
Q ss_pred EEcc-cc---------------eEEEEEEEEeccCCC-ceEEecCCCCc--eEEEEeeCCcEEEEEEE
Q 001314 79 CFFS-NN---------------HWYLKYEIRYLRRDG-IRFMWHPTKPL--QLICWTLDGQITTYNFI 127 (1102)
Q Consensus 79 Wt~~-NY---------------HWYLKqei~~~~~~~-~~~~W~~e~pl--~L~i~t~~g~~~~~~~~ 127 (1102)
-..- .| +|.++.. ....+.+ ..+.|||-... .|+++|+++.+..|+..
T Consensus 91 v~LP~~~~~~~~~~~~~~~q~~ty~l~~~-~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~ 157 (452)
T 3pbp_A 91 MEVPWGYSNVEDVSIQDAFQIFHYSIDEE-EVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDIL 157 (452)
T ss_dssp EECCTTCSCCCCHHHHHTTEEEEEEGGGC-C--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETT
T ss_pred EEecCccccCcccccccccceeEEEcCCc-ccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcc
Confidence 3222 22 2222110 0001233 35899998775 79999999999876644
No 341
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=81.78 E-value=3.1 Score=47.05 Aligned_cols=52 Identities=13% Similarity=0.064 Sum_probs=26.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
-+.+|.+.|++++|+++|.+ |+. .+++. ...+..+|..+...|+|.+|...|
T Consensus 279 la~~~~~~g~~~~A~~~~~~------al~------~~p~~-~~a~~~lg~~~~~~g~~~eA~~~l 330 (370)
T 1ihg_A 279 IGACKLKMSDWQGAVDSCLE------ALE------IDPSN-TKALYRRAQGWQGLKEYDQALADL 330 (370)
T ss_dssp HHHHHHHTTCHHHHHHHHHH------HHT------TCTTC-HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHhccCHHHHHHHHHH------HHH------hCchh-HHHHHHHHHHHHHccCHHHHHHHH
Confidence 34455566666666666543 222 12211 234555666666666666665544
No 342
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=81.71 E-value=3.7 Score=41.18 Aligned_cols=61 Identities=23% Similarity=0.158 Sum_probs=34.6
Q ss_pred hHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHH-hhcCCChHHHHHHH----HHHHHHHHHcCChHHHHHHH
Q 001314 783 FEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVA-GLLKLGKDEVAKLA----QELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 783 ~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA-~~l~~~~~el~~l~----~~lA~~L~~~g~~~eAa~i~ 850 (1102)
|..-+.++...|+|++|+++|.++ +.+- +...+.++.. ... ...+..|...|+|++|...|
T Consensus 60 ~~n~g~al~~Lgr~~eAl~~~~kA------L~l~n~~~e~~pd~~-~A~~~~~~~rG~aL~~lgr~eEAl~~y 125 (159)
T 2hr2_A 60 HAGLAEALAGLRSFDEALHSADKA------LHYFNRRGELNQDEG-KLWISAVYSRALALDGLGRGAEAMPEF 125 (159)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH------HHHHHHHCCTTSTHH-HHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHH------HHhhhccccCCCchH-HHHHHHHHhHHHHHHHCCCHHHHHHHH
Confidence 344456666777777777776543 3320 1112233332 234 66777887777877777665
No 343
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=81.54 E-value=2.7 Score=47.63 Aligned_cols=127 Identities=13% Similarity=0.079 Sum_probs=69.9
Q ss_pred hhhchhHHHhhhcHHHHHHHHHHcCCCcHHHHHHHHHHHh--cchHHHHhccCCcHhHHHHHHHHHHHHhcccChHHHHH
Q 001314 711 LLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYA--QLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAAT 788 (1102)
Q Consensus 711 ~~rr~~Id~~LkryekAl~hl~~~g~~~~deAie~~~~~~--~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~~~~~eeAa~ 788 (1102)
......+....|+|++|+..|.++ +++....+ ..++.+.++ ......++..+|.-+...++|++|..
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kA--------l~~~~~~~~~~~~~~~~~~---~~~~~~~~~nla~~~~~~g~~~~A~~ 294 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKV--------LRYVEGSRAAAEDADGAKL---QPVALSCVLNIGACKLKMSDWQGAVD 294 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH--------HHHHHHHHHHSCHHHHGGG---HHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHH--------HHHhhcCccccChHHHHHH---HHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 344555666678888888776554 33222210 122222221 22234566777888888888888888
Q ss_pred HHHHcCC----HHHH----HHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHHHHHcCChHHHHHH
Q 001314 789 TYFCCSS----LEKA----MKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEELQALGKPGEAAKI 849 (1102)
Q Consensus 789 ~Y~~ag~----~ekA----l~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~L~~~g~~~eAa~i 849 (1102)
+|.++=. ..+| -.+|...|+|++|+....+. .+.++ -..+...++..+...+++.+|.+.
T Consensus 295 ~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~-~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 295 SCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPE-DKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp HHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877622 1222 25667777777776543321 11111 123555566666666677766553
No 344
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=81.42 E-value=6.4 Score=36.68 Aligned_cols=19 Identities=11% Similarity=0.167 Sum_probs=11.9
Q ss_pred HHHHHHcCCHHHHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRA 805 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ 805 (1102)
+.+|...|++++|+++|.+
T Consensus 90 g~~~~~~~~~~~A~~~~~k 108 (127)
T 4gcn_A 90 GNAFQKQNDLSLAVQWFHR 108 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH
Confidence 3456666777777776654
No 345
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=81.30 E-value=6.3 Score=45.70 Aligned_cols=47 Identities=15% Similarity=0.038 Sum_probs=22.3
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHh-hcCCChHHHHHHHHHHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAG-LLKLGKDEVAKLAQELCEELQA 839 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~-~l~~~~~el~~l~~~lA~~L~~ 839 (1102)
+.+|...|++++|+..|.+ |+.+.. .+|.+...+.++...|++...+
T Consensus 378 a~~~~~~g~~~eA~~~~~~------Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e 425 (429)
T 3qwp_A 378 GKLQLHQGMFPQAMKNLRL------AFDIMRVTHGREHSLIEDLILLLEECDAN 425 (429)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHHHHHHTCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHH------HHHHHHHhcCCCChHHHHHHHHHHHHHHH
Confidence 3344444555555555443 233222 2444444556666666665543
No 346
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=80.84 E-value=6.6 Score=39.79 Aligned_cols=64 Identities=5% Similarity=-0.137 Sum_probs=37.6
Q ss_pred chhHHHhhhcHHHHHHHHHHc---CCCcH----HHHHHHHHHHhcchHHHHhcc-----CCcHhHHHHHHHHHHHHhcc
Q 001314 714 RYTIDLRLQRFENALKHIVSM---GDSYH----ADCLNLMKKYAQLFPLGLKLI-----TDPAKMEQVLEAWADHLSDV 780 (1102)
Q Consensus 714 r~~Id~~LkryekAl~hl~~~---g~~~~----deAie~~~~~~~Ly~~AL~L~-----~d~~~~~~i~~~yAd~L~~~ 780 (1102)
...+...+|+|++|+..|.++ .++.. ..+.- .... +.|++|++.| .+|... ..+...|..+...
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~-~~~~-g~~~~A~~~~~~al~~~P~~~-~a~~~lg~~~~~~ 135 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAEM-QVCR-GQEKDALRMYEKILQLEADNL-AANIFLGNYYYLT 135 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHH-TCHHHHHHHHHHHHHHCTTCH-HHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHc-CCHHHHHHHHHHHHHcCCCCH-HHHHHHHHHHHHH
Confidence 466777799999999988764 33322 22222 2344 7888888877 244432 3444455554333
No 347
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=80.65 E-value=11 Score=41.25 Aligned_cols=81 Identities=7% Similarity=0.015 Sum_probs=50.5
Q ss_pred ceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCe--EEEEE
Q 001314 4 VLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDS--VKICF 80 (1102)
Q Consensus 4 ~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~--vqLWt 80 (1102)
.+.|.| .|..||.....+.......|..+...|-......- ......+..+.|++||..|+.......... |.+|.
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 468999 89888876532110012578888876643222211 111335888999999998888764444444 99998
Q ss_pred cccce
Q 001314 81 FSNNH 85 (1102)
Q Consensus 81 ~~NYH 85 (1102)
..+-.
T Consensus 271 ~~~g~ 275 (396)
T 3c5m_A 271 PETLE 275 (396)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 86654
No 348
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=79.93 E-value=5.4 Score=39.05 Aligned_cols=24 Identities=21% Similarity=0.228 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
....++..+...|++.+|...|.+
T Consensus 146 a~~~l~~~~~~~g~~~~A~~~y~~ 169 (176)
T 2r5s_A 146 VKKTFMDILSALGQGNAIASKYRR 169 (176)
T ss_dssp HHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcHHHHHHH
Confidence 455677788888888888877643
No 349
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=79.57 E-value=15 Score=33.07 Aligned_cols=81 Identities=14% Similarity=-0.066 Sum_probs=46.2
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc----CC---H--
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC----GD---V-- 857 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD---~-- 857 (1102)
+..|...|++++|++.|.. ++.. .+.+. ........+|..+...|+|.+|...|.+.+ ++ +
T Consensus 9 a~~~~~~~~~~~A~~~~~~------~~~~---~p~~~-~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~ 78 (129)
T 2xev_A 9 AFDALKNGKYDDASQLFLS------FLEL---YPNGV-YTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGG 78 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHH---CSSST-THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHH
T ss_pred HHHHHHhCCHHHHHHHHHH------HHHH---CCCCc-ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHH
Confidence 4455566777777777654 2222 11111 112355667778888888888888775533 22 1
Q ss_pred -HHHHHHHHHhcCHHHHHHHH
Q 001314 858 -TNGISLLIDARDWEEALRVA 877 (1102)
Q Consensus 858 -e~AI~~y~~~~~W~eA~rLa 877 (1102)
-....+|.+.++|++|+...
T Consensus 79 ~~~la~~~~~~g~~~~A~~~~ 99 (129)
T 2xev_A 79 LLKLGLSQYGEGKNTEAQQTL 99 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHH
Confidence 12235566677777776543
No 350
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=79.45 E-value=6.9 Score=37.56 Aligned_cols=27 Identities=19% Similarity=0.167 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHcC
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCCS 794 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~ag 794 (1102)
..+...|..+...++|++|...|.++=
T Consensus 12 ~~~~~~G~~~~~~~~~~~A~~~y~~al 38 (162)
T 3rkv_A 12 EALRQKGNELFVQKDYKEAIDAYRDAL 38 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 345566777777777777777776653
No 351
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=79.00 E-value=25 Score=37.16 Aligned_cols=101 Identities=13% Similarity=0.055 Sum_probs=59.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC--Ccc---eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN--GLE---RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN--GLr---hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqL 78 (1102)
.++|.|.|+++++.. ....|..|.-+ |-. ..-| .. ....+.+|+|++||.+++.. ...|++
T Consensus 176 gi~~s~dg~~lv~~~------~~~~i~~~~~~~~g~~~~~~~~~--~~-~~~~p~~i~~d~~G~l~v~~-----~~~v~~ 241 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDT------GDNATHRYCLNARGETEYQGVHF--TV-EPGKTDGLRVDAGGLIWASA-----GDGVHV 241 (296)
T ss_dssp EEEECTTSCEEEEET------TTTEEEEEEECSSSCEEEEEEEE--CC-SSSCCCSEEEBTTSCEEEEE-----TTEEEE
T ss_pred cEEECCCCCEEEEeC------CCCeEEEEEECCCCcCcCCCeEe--eC-CCCCCCeEEECCCCCEEEEc-----CCeEEE
Confidence 488999999884332 24578888764 433 2222 11 12246789999999865532 568999
Q ss_pred EEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEE
Q 001314 79 CFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITT 123 (1102)
Q Consensus 79 Wt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~ 123 (1102)
|....-. ...+..+.. ..++.|...+.-.|++.+ .+.+..
T Consensus 242 ~~~~g~~---~~~~~~~~~-~~~~~f~~~d~~~L~v~t-~~~l~~ 281 (296)
T 3e5z_A 242 LTPDGDE---LGRVLTPQT-TSNLCFGGPEGRTLYMTV-STEFWS 281 (296)
T ss_dssp ECTTSCE---EEEEECSSC-CCEEEEESTTSCEEEEEE-TTEEEE
T ss_pred ECCCCCE---EEEEECCCC-ceeEEEECCCCCEEEEEc-CCeEEE
Confidence 9876322 334444433 345778533334578854 444433
No 352
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=78.82 E-value=24 Score=30.65 Aligned_cols=84 Identities=13% Similarity=0.097 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHcCC--------HHHHHHHHHHcCCHHHHHHHHhhc-CCChHHHHHHHHHHHHH
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFCCSS--------LEKAMKAYRASGNWSGVLTVAGLL-KLGKDEVAKLAQELCEE 836 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------~ekAl~~y~~ag~W~~al~lA~~l-~~~~~el~~l~~~lA~~ 836 (1102)
....+...|..+...++|++|..+|.++-. +-....+|...|++++|+....+. ...+.. ......++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~ 86 (125)
T 1na0_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc-HHHHHHHHHH
Confidence 345666778888888999999888887621 112335677778888887655432 111111 1234444555
Q ss_pred HHHcCChHHHHHHH
Q 001314 837 LQALGKPGEAAKIA 850 (1102)
Q Consensus 837 L~~~g~~~eAa~i~ 850 (1102)
+...|++.+|...+
T Consensus 87 ~~~~~~~~~A~~~~ 100 (125)
T 1na0_A 87 YYKQGDYDEAIEYY 100 (125)
T ss_dssp HHHTTCHHHHHHHH
T ss_pred HHHhcCHHHHHHHH
Confidence 54555555544443
No 353
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=78.68 E-value=11 Score=34.06 Aligned_cols=79 Identities=22% Similarity=0.163 Sum_probs=43.8
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc----CCHH-
Q 001314 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC----GDVT- 858 (1102)
Q Consensus 784 eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~e- 858 (1102)
..-+..|...|++++|++.|.+ ++.+. +.. ......+|..+...|+|.+|...|.+-+ ++++
T Consensus 8 ~~~g~~~~~~~~~~~A~~~~~~------al~~~---p~~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~ 74 (126)
T 3upv_A 8 RLEGKEYFTKSDWPNAVKAYTE------MIKRA---PED----ARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRA 74 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH------HHHHC---TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHH------HHHhC---CCC----hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHH
Confidence 3444556666777777777654 33321 111 2466677777888888888877764422 1111
Q ss_pred --HHHHHHHHhcCHHHHHH
Q 001314 859 --NGISLLIDARDWEEALR 875 (1102)
Q Consensus 859 --~AI~~y~~~~~W~eA~r 875 (1102)
.-..+|...++|++|+.
T Consensus 75 ~~~lg~~~~~~~~~~~A~~ 93 (126)
T 3upv_A 75 YIRKATAQIAVKEYASALE 93 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHhCHHHHHH
Confidence 12334555566666654
No 354
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=78.66 E-value=24 Score=37.75 Aligned_cols=61 Identities=7% Similarity=0.025 Sum_probs=39.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAA 66 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv 66 (1102)
.++|.|.|++++++... .+....|..|+.+|-+...+.........+..+.|++|+.++..
T Consensus 91 ~i~~~~dg~l~v~~~~~--~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~ 151 (333)
T 2dg1_A 91 AIKIHKDGRLFVCYLGD--FKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFT 151 (333)
T ss_dssp EEEECTTSCEEEEECTT--SSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEE
T ss_pred eEEECCCCcEEEEeCCC--CCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEE
Confidence 57899999988886421 00125788899887654433211122346889999999987654
No 355
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=78.57 E-value=8.8 Score=34.13 Aligned_cols=24 Identities=4% Similarity=0.004 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
....+|..+...|++.+|...+.+
T Consensus 40 ~~~~la~~~~~~~~~~~A~~~~~~ 63 (131)
T 1elr_A 40 YITNQAAVYFEKGDYNKCRELCEK 63 (131)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHH
Confidence 455566666667777776666543
No 356
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=78.30 E-value=13 Score=35.67 Aligned_cols=76 Identities=17% Similarity=0.092 Sum_probs=40.8
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc----CCH---HH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC----GDV---TN 859 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~---e~ 859 (1102)
+..|...|++++|+++|.+ ++.+. +.. ......+|..+...|+|.+|...|.+-+ +++ -.
T Consensus 18 g~~~~~~g~~~~A~~~~~~------al~~~---p~~----~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~ 84 (164)
T 3sz7_A 18 GNAAMARKEYSKAIDLYTQ------ALSIA---PAN----PIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSR 84 (164)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHHS---TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH------HHHhC---CcC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 3444555666666666544 33321 111 2466677777888888888877764422 111 12
Q ss_pred HHHHHHHhcCHHHHHH
Q 001314 860 GISLLIDARDWEEALR 875 (1102)
Q Consensus 860 AI~~y~~~~~W~eA~r 875 (1102)
-..+|.+.++|++|+.
T Consensus 85 lg~~~~~~g~~~~A~~ 100 (164)
T 3sz7_A 85 LGLARFDMADYKGAKE 100 (164)
T ss_dssp HHHHHHHTTCHHHHHH
T ss_pred HHHHHHHccCHHHHHH
Confidence 2344555566666654
No 357
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=78.07 E-value=3.6 Score=40.01 Aligned_cols=21 Identities=5% Similarity=-0.010 Sum_probs=8.5
Q ss_pred HHHHHHHhcccChHHHHHHHH
Q 001314 771 EAWADHLSDVKCFEDAATTYF 791 (1102)
Q Consensus 771 ~~yAd~L~~~~~~eeAa~~Y~ 791 (1102)
..+|..+...++|++|..+|.
T Consensus 48 ~~lg~~~~~~~~~~~A~~~~~ 68 (177)
T 2e2e_A 48 ALLGEYYLWQNDYSNSLLAYR 68 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHH
Confidence 334444444444444433333
No 358
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=77.97 E-value=85 Score=35.09 Aligned_cols=61 Identities=8% Similarity=0.019 Sum_probs=34.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceee-eecCCc----cccceeeeeecCCCCeEEEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSS-FDINEQ----IDSTVELLKWNCMSDLLAAVV 68 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhge-F~L~~~----~~~~v~~L~Wn~DS~iLAv~~ 68 (1102)
.+.|.|.|.++..+.+. ....|.+|+..|....+ +.+|.. .+..-.-...+.|+.++.|-.
T Consensus 129 ~~~~spDG~~l~v~n~~----~~~~v~viD~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 129 MNANTPNNADLLFFQFA----AGPAVGLVVQGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred ceEECCCCCEEEEEecC----CCCeEEEEECCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC
Confidence 57899999988887643 13467778844444556 655531 000001133446777666543
No 359
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=77.92 E-value=65 Score=32.93 Aligned_cols=105 Identities=6% Similarity=-0.099 Sum_probs=56.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
.+++-|.|++.+++.. ....|..|..++.....+... ....+..|++++|+.++.. .. ...|..|+...
T Consensus 28 ~i~~~~~g~l~v~~~~-----~~~~i~~~~~~~~~~~~~~~~--~~~~p~~i~~~~~g~l~v~---~~-~~~i~~~d~~~ 96 (270)
T 1rwi_B 28 GVAVDSAGNVYVTSEG-----MYGRVVKLATGSTGTTVLPFN--GLYQPQGLAVDGAGTVYVT---DF-NNRVVTLAAGS 96 (270)
T ss_dssp EEEECTTCCEEEEECS-----SSCEEEEECC-----EECCCC--SCCSCCCEEECTTCCEEEE---ET-TTEEEEECTTC
T ss_pred ceEECCCCCEEEEccC-----CCCcEEEecCCCcccceEeeC--CcCCcceeEECCCCCEEEE---cC-CCEEEEEeCCC
Confidence 5788899997772321 245788888776554333222 1235788999999994433 23 56899998765
Q ss_pred ceEEEEEEEEeccCCC-ceEEecCCCCceEEEEe-eCCcEEEE
Q 001314 84 NHWYLKYEIRYLRRDG-IRFMWHPTKPLQLICWT-LDGQITTY 124 (1102)
Q Consensus 84 YHWYLKqei~~~~~~~-~~~~W~~e~pl~L~i~t-~~g~~~~~ 124 (1102)
-.. ..+....... ..+.+++..- |++.. .+|.+..+
T Consensus 97 ~~~---~~~~~~~~~~p~~i~~~~~g~--l~v~~~~~~~i~~~ 134 (270)
T 1rwi_B 97 NNQ---TVLPFDGLNYPEGLAVDTQGA--VYVADRGNNRVVKL 134 (270)
T ss_dssp SCC---EECCCCSCSSEEEEEECTTCC--EEEEEGGGTEEEEE
T ss_pred ceE---eeeecCCcCCCcceEECCCCC--EEEEECCCCEEEEE
Confidence 431 1121111122 3477887543 55533 23455544
No 360
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=77.81 E-value=12 Score=42.56 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=16.0
Q ss_pred hchhHHHhhhc-HHHHHHHHHHc
Q 001314 713 MRYTIDLRLQR-FENALKHIVSM 734 (1102)
Q Consensus 713 rr~~Id~~Lkr-yekAl~hl~~~ 734 (1102)
.+..+-..+|+ |++|+..|.++
T Consensus 136 ~~g~~l~~~g~d~~eAl~~~~~a 158 (382)
T 2h6f_A 136 FRRVLLKSLQKDLHEEMNYITAI 158 (382)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHcccCHHHHHHHHHHH
Confidence 34566667887 99988887764
No 361
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=77.56 E-value=25 Score=30.89 Aligned_cols=52 Identities=10% Similarity=0.049 Sum_probs=32.2
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHH
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
-+.+|...|++++|+++|.+ ++.+.. .. ......+|..+...|++.+|...|
T Consensus 13 lg~~~~~~g~~~~A~~~~~~------al~~~p---~~----~~a~~~lg~~~~~~g~~~~A~~~~ 64 (100)
T 3ma5_A 13 LAQEHLKHDNASRALALFEE------LVETDP---DY----VGTYYHLGKLYERLDRTDDAIDTY 64 (100)
T ss_dssp HHHHHHHTTCHHHHHHHHHH------HHHHST---TC----THHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH------HHHhCC---Cc----HHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34566667777777777654 343321 11 135666777777778877777765
No 362
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=77.48 E-value=8.1 Score=46.32 Aligned_cols=75 Identities=5% Similarity=-0.114 Sum_probs=48.5
Q ss_pred ceeec--cCCCe-EEEEeeccCCCCCCeEEEEecC--C-cceeeeec-CCc-cccceeeeeecCCCCeEEEEEee-----
Q 001314 4 VLEWM--PSGAN-IAAVYDRKSENKCPSIVFYERN--G-LERSSFDI-NEQ-IDSTVELLKWNCMSDLLAAVVRF----- 70 (1102)
Q Consensus 4 ~LsWr--PsGnl-IA~~qr~~~~~~~~~VvFFERN--G-LrhgeF~L-~~~-~~~~v~~L~Wn~DS~iLAv~~~~----- 70 (1102)
+..|. |.|.. ||.+... ...|-.++.+ | -....++- +.. ....+..++|++||..||.....
T Consensus 81 ~~~~~~SPDg~~~la~~~~~-----~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~ 155 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFG-----DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEG 155 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTT-----TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSS
T ss_pred cceeeeecCCCeEEEEEECC-----CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCC
Confidence 45576 99998 9987632 4578888877 3 22222221 100 23468899999999999987643
Q ss_pred --CCCCeEEEEEccc
Q 001314 71 --EEYDSVKICFFSN 83 (1102)
Q Consensus 71 --~~~~~vqLWt~~N 83 (1102)
.....|.+|....
T Consensus 156 ~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 156 PSDVRRFLAAVPLDG 170 (662)
T ss_dssp TTCEEEEEEEEETTS
T ss_pred CCCceeEEEEEECCC
Confidence 1124788888765
No 363
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=77.46 E-value=78 Score=33.56 Aligned_cols=68 Identities=6% Similarity=0.045 Sum_probs=48.8
Q ss_pred Cceeecc-CCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 3 AVLEWMP-SGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 3 ~~LsWrP-sGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
....|.| .|+++.+-. ....|..|...+-+...+.++. .+..++|++|+.+++. . .+.|.+|+.
T Consensus 16 Egp~w~~~~~~l~~~d~------~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~dG~l~v~-~----~~~l~~~d~ 80 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI------PAKKVCRWDSFTKQVQRVTMDA----PVSSVALRQSGGYVAT-I----GTKFCALNW 80 (297)
T ss_dssp EEEEEETTTTEEEEEET------TTTEEEEEETTTCCEEEEECSS----CEEEEEEBTTSSEEEE-E----TTEEEEEET
T ss_pred cCCeEECCCCEEEEEEC------CCCEEEEEECCCCcEEEEeCCC----ceEEEEECCCCCEEEE-E----CCeEEEEEC
Confidence 4578999 566666643 2468999998887666666653 6889999999994443 2 468999987
Q ss_pred ccce
Q 001314 82 SNNH 85 (1102)
Q Consensus 82 ~NYH 85 (1102)
.+-.
T Consensus 81 ~~g~ 84 (297)
T 3g4e_A 81 KEQS 84 (297)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 6554
No 364
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=76.96 E-value=2.3 Score=38.04 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=11.9
Q ss_pred hhHHHhhhcHHHHHHHHHHc
Q 001314 715 YTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~ 734 (1102)
..+....|+|++|+..|.++
T Consensus 19 ~~~~~~~~~~~~A~~~~~~~ 38 (131)
T 2vyi_A 19 GNEQMKVENFEAAVHFYGKA 38 (131)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHH
Confidence 44444566777776666553
No 365
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=76.18 E-value=0.65 Score=54.61 Aligned_cols=51 Identities=18% Similarity=0.053 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhc----CCHH---H--HHHHHHHhcCHHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALDYC----GDVT---N--GISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~e---~--AI~~y~~~~~W~eA~rLa~ 878 (1102)
.....+|..+...|+|++|...|.+.+ ++.+ . .+..+.+.++|++|+.+..
T Consensus 75 ~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 75 KGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 456678888888999999988875532 1111 1 1122666788888887655
No 366
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=75.72 E-value=20 Score=33.46 Aligned_cols=50 Identities=14% Similarity=-0.043 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhc----CCH---HHHHHHHHHhcCHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALDYC----GDV---TNGISLLIDARDWEEALRVA 877 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~---e~AI~~y~~~~~W~eA~rLa 877 (1102)
.....+|..+...|+|.+|...|.+-+ +++ -....+|...++|++|+...
T Consensus 53 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 109 (142)
T 2xcb_A 53 RYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGF 109 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHH
Confidence 355667777788888888887774422 222 12345667777777776543
No 367
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=75.43 E-value=2.7 Score=36.60 Aligned_cols=25 Identities=8% Similarity=0.118 Sum_probs=14.6
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHc
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
++...|.-+...++|++|...|.++
T Consensus 37 ~~~~lg~~~~~~~~~~~A~~~~~~a 61 (99)
T 2kc7_A 37 AYYLMGNAYRKLGDWQKALNNYQSA 61 (99)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4555666666666666666555543
No 368
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=75.19 E-value=3 Score=38.74 Aligned_cols=22 Identities=9% Similarity=-0.050 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...|
T Consensus 87 ~~~~la~~~~~~g~~~~A~~~~ 108 (121)
T 1hxi_A 87 VHAALAVSHTNEHNANAALASL 108 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHH
Confidence 3444555555555555555554
No 369
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=74.23 E-value=31 Score=37.48 Aligned_cols=72 Identities=15% Similarity=0.070 Sum_probs=44.4
Q ss_pred eeeccCCCeEEEEeeccCCCCCCe--EEEEecCCcceeee-ecCCccccceeeeeecC-CCCeEEEEEe-----------
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPS--IVFYERNGLERSSF-DINEQIDSTVELLKWNC-MSDLLAAVVR----------- 69 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~--VvFFERNGLrhgeF-~L~~~~~~~v~~L~Wn~-DS~iLAv~~~----------- 69 (1102)
++|.|.|..||...... .... |..|+-.+-+.... .++. +. +.|++ ||.+|+....
T Consensus 243 ~~~spdg~~l~~~~~~~---~~~~~~l~~~d~~~g~~~~l~~~~~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~ 313 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFK---GQTDRVIYKANPETLENEEVMVMPP-----CS-HLMSNFDGSLMVGDGCDAPVDVADADS 313 (396)
T ss_dssp EEECTTSSCEEEEEEET---TTCCEEEEEECTTTCCEEEEEECCS-----EE-EEEECSSSSEEEEEECCC---------
T ss_pred eEECCCCCEEEEEecCC---CCccceEEEEECCCCCeEEeeeCCC-----CC-CCccCCCCceEEEecCCcceeeccccc
Confidence 68999999887765432 1334 88888654322222 2221 22 89999 9998886321
Q ss_pred --eCCCCeEEEEEcccce
Q 001314 70 --FEEYDSVKICFFSNNH 85 (1102)
Q Consensus 70 --~~~~~~vqLWt~~NYH 85 (1102)
......|.+|...+-.
T Consensus 314 ~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 314 YNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp -CCCCCCEEEEEETTTTB
T ss_pred cccCCCCcEEEEecccCc
Confidence 0123579999876655
No 370
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=73.98 E-value=32 Score=31.47 Aligned_cols=57 Identities=16% Similarity=-0.009 Sum_probs=38.2
Q ss_pred hHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 783 FEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 783 ~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
+-+-+..|.+.|++++|+.+|.+ ++.+ .+.. ......+|..+...|++.+|...|.+
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~------al~~---~P~~----~~a~~~lg~~~~~~g~~~~A~~~~~~ 76 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEA------VCQK---EPER----EEAWRSLGLTQAENEKDGLAIIALNH 76 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH------HHHH---STTC----HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHH------HHHH---CCCC----HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 34445667777888888888765 3332 1112 24566788888888999988887744
No 371
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=73.89 E-value=21 Score=38.36 Aligned_cols=98 Identities=12% Similarity=0.025 Sum_probs=55.7
Q ss_pred eeeccCCCeEEEEeeccCC---CCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCC--eEEEE
Q 001314 5 LEWMPSGANIAAVYDRKSE---NKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYD--SVKIC 79 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~---~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~--~vqLW 79 (1102)
.+| .|..||.+....+. .....|.+++-.|-+...+ ..+..+.|++||..||......... .|.+|
T Consensus 20 ~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-------~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~ 90 (347)
T 2gop_A 20 PRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-------ENATMPRISPDGKKIAFMRANEEKKVSEIWVA 90 (347)
T ss_dssp EEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-------ESCEEEEECTTSSEEEEEEEETTTTEEEEEEE
T ss_pred ceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-------ccCCCeEECCCCCEEEEEEeccCCCcceEEEE
Confidence 345 78888877543211 0134677777766443332 2577899999999999876443223 35555
Q ss_pred EcccceEEEEEEEEeccCCCceEEecCCCCceEEEEe
Q 001314 80 FFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWT 116 (1102)
Q Consensus 80 t~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t 116 (1102)
....-.. ++-...+ . ...+.|+|.... |++..
T Consensus 91 ~~~~g~~--~~l~~~~-~-~~~~~wspdg~~-l~~~~ 122 (347)
T 2gop_A 91 DLETLSS--KKILEAK-N-IRSLEWNEDSRK-LLIVG 122 (347)
T ss_dssp ETTTTEE--EEEEEES-E-EEEEEECTTSSE-EEEEE
T ss_pred ECCCCce--EEEEcCC-C-ccceeECCCCCE-EEEEE
Confidence 5544331 1222221 1 234899987654 55543
No 372
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=73.85 E-value=18 Score=32.84 Aligned_cols=79 Identities=14% Similarity=0.085 Sum_probs=42.5
Q ss_pred HHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc----CCHH--
Q 001314 785 DAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC----GDVT-- 858 (1102)
Q Consensus 785 eAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~e-- 858 (1102)
.-+..|...|++++|+.+|.+ ++.+. +.. ......+|..+...|++.+|...|.+-+ +++.
T Consensus 14 ~~g~~~~~~~~~~~A~~~~~~------al~~~---~~~----~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 80 (137)
T 3q49_B 14 EQGNRLFVGRKYPEAAACYGR------AITRN---PLV----AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 80 (137)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH------HHHHC---TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHH
T ss_pred HHHHHHHHhCcHHHHHHHHHH------HHhhC---cCc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHH
Confidence 334455556666666666543 33321 111 2456667777777888888877764422 1211
Q ss_pred -HHHHHHHHhcCHHHHHHH
Q 001314 859 -NGISLLIDARDWEEALRV 876 (1102)
Q Consensus 859 -~AI~~y~~~~~W~eA~rL 876 (1102)
.-..+|...++|++|+..
T Consensus 81 ~~l~~~~~~~~~~~~A~~~ 99 (137)
T 3q49_B 81 FFLGQCQLEMESYDEAIAN 99 (137)
T ss_dssp HHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHH
Confidence 233445556666666543
No 373
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=73.20 E-value=7.5 Score=39.23 Aligned_cols=50 Identities=24% Similarity=0.182 Sum_probs=37.0
Q ss_pred HHHHHHHhcchHHHHhcc--------C-----CcHhHHHHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 743 LNLMKKYAQLFPLGLKLI--------T-----DPAKMEQVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 743 ie~~~~~~~Ly~~AL~L~--------~-----d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
++..-++ +||+-|.-++ . .|...-+++-.+||-+..+++|..|..+|.+|
T Consensus 27 ik~L~d~-~LY~sA~~La~lLlSl~~~~~~~~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qA 89 (167)
T 3ffl_A 27 VRDMAAA-GLHSNVRLLSSLLLTLSNNNPELFSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMA 89 (167)
T ss_dssp HHHHHHT-TCHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHh-hhHHHHHHHHHHHHHhhcCCcccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHH
Confidence 3334455 6777776655 1 24455678889999999999999999999985
No 374
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=73.15 E-value=4.7 Score=34.92 Aligned_cols=80 Identities=10% Similarity=-0.032 Sum_probs=46.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc----C--CHH-
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC----G--DVT- 858 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl----g--D~e- 858 (1102)
-+..|...|++++|+.+|.+ ++.+. +.. ......+|..+...|++.+|...+.+.+ + +.+
T Consensus 12 ~~~~~~~~~~~~~A~~~~~~------a~~~~---~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 12 EGVLQYDAGNYTESIDLFEK------AIQLD---PEE----SKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp HHHHHHSSCCHHHHHHHHHH------HHHHC---CCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred HHHHHHHhhhHHHHHHHHHH------HHHhC---cCC----HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHH
Confidence 34555666667777766654 22221 111 2356677888888889988888775432 1 221
Q ss_pred --HHHHHHHHh-cCHHHHHHHHH
Q 001314 859 --NGISLLIDA-RDWEEALRVAF 878 (1102)
Q Consensus 859 --~AI~~y~~~-~~W~eA~rLa~ 878 (1102)
....+|.+. ++|++|+....
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~ 101 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEAEIAEA 101 (112)
T ss_dssp HHHHHHHHTTCSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 233455566 77777765443
No 375
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=73.05 E-value=20 Score=30.94 Aligned_cols=80 Identities=13% Similarity=0.057 Sum_probs=44.7
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhc----CCH---H
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYC----GDV---T 858 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~yl----gD~---e 858 (1102)
-+..|...|++++|+++|.+ ++.+ .+.+ ......+|..+...|++.+|...+.+.+ +++ -
T Consensus 10 ~~~~~~~~~~~~~A~~~~~~------~~~~---~~~~----~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~ 76 (118)
T 1elw_A 10 KGNKALSVGNIDDALQCYSE------AIKL---DPHN----HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYS 76 (118)
T ss_dssp HHHHHHHTTCHHHHHHHHHH------HHHH---CTTC----HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHcccHHHHHHHHHH------HHHH---CCCc----HHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHH
Confidence 34455556666666666554 2222 1111 2356667777777888888887764422 122 1
Q ss_pred HHHHHHHHhcCHHHHHHHHH
Q 001314 859 NGISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 859 ~AI~~y~~~~~W~eA~rLa~ 878 (1102)
....+|...++|++|+....
T Consensus 77 ~~a~~~~~~~~~~~A~~~~~ 96 (118)
T 1elw_A 77 RKAAALEFLNRFEEAKRTYE 96 (118)
T ss_dssp HHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHHHHHHH
Confidence 23456667777777765543
No 376
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=72.89 E-value=2 Score=47.85 Aligned_cols=24 Identities=13% Similarity=-0.072 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHcCChHHHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.+..+|..+...|+|.+|...|.+
T Consensus 266 a~~~lg~a~~~~g~~~~A~~~l~~ 289 (338)
T 2if4_A 266 ALFRRGKAKAELGQMDSARDDFRK 289 (338)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 455666667777777777776654
No 377
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=72.73 E-value=21 Score=31.92 Aligned_cols=55 Identities=16% Similarity=0.177 Sum_probs=29.4
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
+.+|...|++++|++.|.+ ++.. .+.++ ........+|..+...|++.+|...|.
T Consensus 46 g~~~~~~~~~~~A~~~~~~------~~~~---~p~~~-~~~~~~~~la~~~~~~g~~~~A~~~~~ 100 (129)
T 2xev_A 46 GESYYATRNFQLAEAQFRD------LVSR---YPTHD-KAAGGLLKLGLSQYGEGKNTEAQQTLQ 100 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHH---CTTST-THHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHH------HHHH---CCCCc-ccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3445556666666666554 2222 11111 112445566767777777777776653
No 378
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=72.41 E-value=24 Score=42.97 Aligned_cols=79 Identities=10% Similarity=-0.021 Sum_probs=47.5
Q ss_pred CceeeccCCCeEEEEeeccCC-------CCCCeEEEEecCCccee-eeecCCccc-cceeeeeecCCCCeEEEEEeeC-C
Q 001314 3 AVLEWMPSGANIAAVYDRKSE-------NKCPSIVFYERNGLERS-SFDINEQID-STVELLKWNCMSDLLAAVVRFE-E 72 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~-------~~~~~VvFFERNGLrhg-eF~L~~~~~-~~v~~L~Wn~DS~iLAv~~~~~-~ 72 (1102)
..++|.|.|..|+.+.....+ .....|..+...+-.-. ......+.. ..+....|++||..|++..... .
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 468999999999987643210 11345888877653321 122222122 3577899999999999876433 2
Q ss_pred CCeEEEEEc
Q 001314 73 YDSVKICFF 81 (1102)
Q Consensus 73 ~~~vqLWt~ 81 (1102)
...|.+|+.
T Consensus 251 ~~~l~~~~~ 259 (695)
T 2bkl_A 251 ENDVYWKRP 259 (695)
T ss_dssp EEEEEEECT
T ss_pred ceEEEEEcC
Confidence 234555543
No 379
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=72.32 E-value=2.6 Score=38.43 Aligned_cols=10 Identities=10% Similarity=0.225 Sum_probs=3.6
Q ss_pred ccChHHHHHH
Q 001314 780 VKCFEDAATT 789 (1102)
Q Consensus 780 ~~~~eeAa~~ 789 (1102)
.++|++|...
T Consensus 40 ~~~~~~A~~~ 49 (117)
T 3k9i_A 40 LGEYRKAEAV 49 (117)
T ss_dssp TTCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 3333333333
No 380
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=71.21 E-value=8.2 Score=37.02 Aligned_cols=53 Identities=13% Similarity=0.070 Sum_probs=28.9
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
+.+|...|++++|+++|.+ ++.+. +.+. .....+|..+...|++.+|...|..
T Consensus 62 g~~~~~~g~~~~A~~~~~~------al~l~---p~~~----~~~~~lg~~~~~~g~~~~A~~~~~~ 114 (148)
T 2vgx_A 62 GACRQAMGQYDLAIHSYSY------GAVMD---IXEP----RFPFHAAECLLQXGELAEAESGLFL 114 (148)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHHS---TTCT----HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHH------HHhcC---CCCc----hHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3345555666666666543 33321 1111 3455667777777777777776644
No 381
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=69.83 E-value=4.3 Score=45.08 Aligned_cols=22 Identities=18% Similarity=0.063 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
++..+|..+...|+|.+|...|
T Consensus 232 ~~~nla~~~~~~g~~~~A~~~~ 253 (338)
T 2if4_A 232 CHLNIAACLIKLKRYDEAIGHC 253 (338)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHH
Confidence 3344444444555555554444
No 382
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=69.76 E-value=1.3e+02 Score=35.87 Aligned_cols=163 Identities=12% Similarity=0.004 Sum_probs=92.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEec---CCcceeeeecCCccccceeeeeec----CCCCeEEEEEeeCCCCeE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYER---NGLERSSFDINEQIDSTVELLKWN----CMSDLLAAVVRFEEYDSV 76 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFER---NGLrhgeF~L~~~~~~~v~~L~Wn----~DS~iLAv~~~~~~~~~v 76 (1102)
.+...|.|.++.++.+ ...|..|+- ++-...++.. ......++++ +||..|.|..+ ....|
T Consensus 201 ~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~~v~~i~~----G~~P~~ia~s~~~~pDGk~l~v~n~--~~~~v 268 (567)
T 1qks_A 201 ISRLSASGRYLFVIGR------DGKVNMIDLWMKEPTTVAEIKI----GSEARSIETSKMEGWEDKYAIAGAY--WPPQY 268 (567)
T ss_dssp EEEECTTSCEEEEEET------TSEEEEEETTSSSCCEEEEEEC----CSEEEEEEECCSTTCTTTEEEEEEE--ETTEE
T ss_pred ceEECCCCCEEEEEcC------CCeEEEEECCCCCCcEeEEEec----CCCCceeEEccccCCCCCEEEEEEc--cCCeE
Confidence 4678899998777652 347999987 4444443322 2246789999 69999998764 35678
Q ss_pred EEEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCe---EEeccCCC
Q 001314 77 KICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSK---ILVTPLSL 153 (1102)
Q Consensus 77 qLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~---l~lTp~r~ 153 (1102)
.+|+..... +.+.|..+....-....||+....-++.+..+.. |-++..+.|.|.+||-.. +.+|.+..
T Consensus 269 ~ViD~~t~~--~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~------~vv~~~~~g~v~~vd~~~~~~~~v~~i~~ 340 (567)
T 1qks_A 269 VIMDGETLE--PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE------FIVNVKETGKILLVDYTDLNNLKTTEISA 340 (567)
T ss_dssp EEEETTTCC--EEEEEECCEECTTTCCEESCCCEEEEEECSSSSE------EEEEETTTTEEEEEETTCSSEEEEEEEEC
T ss_pred EEEECCCCc--EEEEEeccccccccccccCCCceEEEEEcCCCCE------EEEEecCCCeEEEEecCCCccceeeeeec
Confidence 899987755 3445543221000112445422211222333332 334456788999998653 44444322
Q ss_pred CCCCCcccccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 154 SLMPPPMYLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 154 a~VPPPM~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
.....+++|++++.. .+.+-..++++.+++..+
T Consensus 341 --------------~~~~~d~~~~pdgr~-~~va~~~sn~V~ViD~~t 373 (567)
T 1qks_A 341 --------------ERFLHDGGLDGSHRY-FITAANARNKLVVIDTKE 373 (567)
T ss_dssp --------------CSSEEEEEECTTSCE-EEEEEGGGTEEEEEETTT
T ss_pred --------------cccccCceECCCCCE-EEEEeCCCCeEEEEECCC
Confidence 223446778776542 222334567788877643
No 383
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=67.57 E-value=28 Score=31.28 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=37.0
Q ss_pred HHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 787 ATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 787 a~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
+.+|...|++++|+++|.+ ++.+ .+.. ......+|..+...|++.+|...+.+
T Consensus 34 g~~~~~~~~~~~A~~~~~~------al~~---~p~~----~~~~~~l~~~~~~~g~~~~A~~~~~~ 86 (117)
T 3k9i_A 34 GSTFRTLGEYRKAEAVLAN------GVKQ---FPNH----QALRVFYAMVLYNLGRYEQGVELLLK 86 (117)
T ss_dssp HHHHHHTTCHHHHHHHHHH------HHHH---CTTC----HHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHH------HHHh---CCCc----hHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 4578888999999998765 4433 1112 24666778888888888888877644
No 384
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=67.24 E-value=1.5e+02 Score=32.51 Aligned_cols=81 Identities=6% Similarity=0.039 Sum_probs=54.2
Q ss_pred ceeeccCCCeEEEEeeccC----CCCCCeEEEEecCC-cceeeeecCCc---cccceeeeeecCCCCeEEEEEeeCCCCe
Q 001314 4 VLEWMPSGANIAAVYDRKS----ENKCPSIVFYERNG-LERSSFDINEQ---IDSTVELLKWNCMSDLLAAVVRFEEYDS 75 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~----~~~~~~VvFFERNG-LrhgeF~L~~~---~~~~v~~L~Wn~DS~iLAv~~~~~~~~~ 75 (1102)
.+++.|.|.++.++..... ++....|..|+-.. -..+++.++.. .......+++++||..|.|.-. ...+.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~-~~~~~ 132 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA-SPATS 132 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE-SSSEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECC-CCCCe
Confidence 4789999998888753210 01134688888644 44567766521 1234678999999999998753 22468
Q ss_pred EEEEEcccce
Q 001314 76 VKICFFSNNH 85 (1102)
Q Consensus 76 vqLWt~~NYH 85 (1102)
|.+|......
T Consensus 133 v~v~d~~~~~ 142 (361)
T 2oiz_A 133 IGIVDVAKGD 142 (361)
T ss_dssp EEEEETTTTE
T ss_pred EEEEECCCCc
Confidence 9999998864
No 385
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=67.23 E-value=29 Score=34.24 Aligned_cols=89 Identities=12% Similarity=-0.012 Sum_probs=51.1
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCC------h--HH-HHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 782 CFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLG------K--DE-VAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 782 ~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~------~--~e-l~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.+..-+..|...|++++|++.|.+ ++.+....+.. . .. ...+...+|..+...|+|.+|...+.+
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~------al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKE------ALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH------HHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH------HHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 445667778888899999888765 33322211100 0 00 124666778888888888888877644
Q ss_pred hc----CCHH---HHHHHHHHhcCHHHHHHH
Q 001314 853 YC----GDVT---NGISLLIDARDWEEALRV 876 (1102)
Q Consensus 853 yl----gD~e---~AI~~y~~~~~W~eA~rL 876 (1102)
-+ ++.. ....+|...++|++|+..
T Consensus 114 al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~ 144 (198)
T 2fbn_A 114 VLKIDKNNVKALYKLGVANMYFGFLEEAKEN 144 (198)
T ss_dssp HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHhCcccHHHHHHHHHHHHHcccHHHHHHH
Confidence 22 1111 233455666677776654
No 386
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=66.10 E-value=25 Score=41.37 Aligned_cols=52 Identities=12% Similarity=-0.047 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhcC-----C---HHHHHHHHHHhcCHHHHHHHHHh
Q 001314 828 KLAQELCEELQALGKPGEAAKIALDYCG-----D---VTNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~ylg-----D---~e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
..+..+...+...|+.++|.+++.+... | +...|..||+.+++++|.++-..
T Consensus 106 ~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 106 ATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHH
Confidence 3577888889999999999999866421 2 46789999999999999987654
No 387
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=65.47 E-value=34 Score=36.44 Aligned_cols=81 Identities=14% Similarity=0.057 Sum_probs=51.6
Q ss_pred HHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcC----CHH--
Q 001314 785 DAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCG----DVT-- 858 (1102)
Q Consensus 785 eAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylg----D~e-- 858 (1102)
.-+..|...|++++|++.|.+ ++.+ .+.. ..+...+|..+...|+|.+|...|.+-+. ++.
T Consensus 9 ~~g~~~~~~g~~~~A~~~~~~------al~~---~p~~----~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~ 75 (281)
T 2c2l_A 9 EQGNRLFVGRKYPEAAACYGR------AITR---NPLV----AVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAH 75 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHHH------HHHH---CSCC----HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHH------HHHh---CCcc----HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHH
Confidence 345566667777777777664 3332 1112 25677888899999999999988755332 221
Q ss_pred -HHHHHHHHhcCHHHHHHHHH
Q 001314 859 -NGISLLIDARDWEEALRVAF 878 (1102)
Q Consensus 859 -~AI~~y~~~~~W~eA~rLa~ 878 (1102)
.-..+|...++|++|+....
T Consensus 76 ~~lg~~~~~~g~~~~A~~~~~ 96 (281)
T 2c2l_A 76 FFLGQCQLEMESYDEAIANLQ 96 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHH
Confidence 22345677788888876543
No 388
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=65.43 E-value=1.5e+02 Score=31.84 Aligned_cols=72 Identities=17% Similarity=0.003 Sum_probs=43.5
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.+.|-|.|++.+++...........|.-|+ +|-.. .+ . ........++|++|+..|.+.- .....|..|+..
T Consensus 138 ~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~-~~--~-~~~~~~~~i~~s~dg~~lyv~~--~~~~~I~~~d~~ 209 (326)
T 2ghs_A 138 DGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGKVT-KL--F-ADISIPNSICFSPDGTTGYFVD--TKVNRLMRVPLD 209 (326)
T ss_dssp EEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTEEE-EE--E-EEESSEEEEEECTTSCEEEEEE--TTTCEEEEEEBC
T ss_pred CEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCcEE-Ee--e-CCCcccCCeEEcCCCCEEEEEE--CCCCEEEEEEcc
Confidence 467899999887765321111124566666 54221 11 1 1112467899999999888763 334689999864
No 389
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=64.07 E-value=5.3 Score=34.96 Aligned_cols=55 Identities=15% Similarity=0.144 Sum_probs=31.0
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHh
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDY 853 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~y 853 (1102)
-+..|...|++++|+++|.+ ++.+. +.. ......+|..+...|+|.+|...|.+.
T Consensus 10 ~g~~~~~~~~~~~A~~~~~~------al~~~---p~~----~~~~~~lg~~~~~~g~~~~A~~~~~~a 64 (111)
T 2l6j_A 10 QGNSLFKQGLYREAVHCYDQ------LITAQ---PQN----PVGYSNKAMALIKLGEYTQAIQMCQQG 64 (111)
T ss_dssp HHHHHHTTTCHHHHHHHHHH------HHHHC---TTC----HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH------HHhcC---CCC----HHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 34455555666666666543 33321 111 235566777777777777777776553
No 390
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=63.23 E-value=83 Score=33.40 Aligned_cols=70 Identities=14% Similarity=0.121 Sum_probs=47.6
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCcc---ccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQI---DSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~---~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
..+-|.|+++++... ....|..|.++|-..-+|.+.... ......+..++|+++|+.. ....+|+.|+.
T Consensus 82 ~~~~~dG~~lv~~~~-----~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~---~~~~~v~~~d~ 153 (276)
T 3no2_A 82 ARILPDGNALVAWCG-----HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL---FATSEVREIAP 153 (276)
T ss_dssp EEECTTSCEEEEEES-----TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE---TTTTEEEEECT
T ss_pred cEECCCCCEEEEecC-----CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEe---cCCCEEEEECC
Confidence 345567777776541 145788899999888888876321 1235566789999998764 33568888876
Q ss_pred c
Q 001314 82 S 82 (1102)
Q Consensus 82 ~ 82 (1102)
.
T Consensus 154 ~ 154 (276)
T 3no2_A 154 N 154 (276)
T ss_dssp T
T ss_pred C
Confidence 3
No 391
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=62.86 E-value=8.1 Score=43.93 Aligned_cols=25 Identities=12% Similarity=0.122 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.....++..+...|++.+|...|.+
T Consensus 167 ~a~~~~g~~~~~~g~~~eAl~~~~k 191 (382)
T 2h6f_A 167 QVWHHRRVLVEWLRDPSQELEFIAD 191 (382)
T ss_dssp HHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3455566666666777777666543
No 392
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=62.17 E-value=1.7 Score=51.03 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=13.7
Q ss_pred hhHHHhhhcHHHHHHHHHHc
Q 001314 715 YTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~ 734 (1102)
+.+....|+|++|+..|.++
T Consensus 13 g~~~~~~g~~~~A~~~~~~A 32 (477)
T 1wao_1 13 ANDYFKAKDYENAIKFYSQA 32 (477)
T ss_dssp SSSTTTTTCHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHH
Confidence 34444578888888887764
No 393
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=61.43 E-value=58 Score=34.27 Aligned_cols=26 Identities=12% Similarity=0.103 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHH
Q 001314 826 VAKLAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 826 l~~l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
+..++...|..|+..|+|.+|..||.
T Consensus 149 ~AlfYe~wA~~lE~~g~~~~A~~Vy~ 174 (223)
T 4aez_C 149 SSIFYEEYANYFESRGLFQKADEVYQ 174 (223)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 45789999999999999999999984
No 394
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=61.06 E-value=7.1 Score=37.87 Aligned_cols=21 Identities=14% Similarity=-0.005 Sum_probs=14.2
Q ss_pred chhHHHhhhcHHHHHHHHHHc
Q 001314 714 RYTIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 714 r~~Id~~LkryekAl~hl~~~ 734 (1102)
...+....|+|++|+..|.++
T Consensus 50 lg~~~~~~~~~~~A~~~~~~a 70 (177)
T 2e2e_A 50 LGEYYLWQNDYSNSLLAYRQA 70 (177)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHH
Confidence 345555678888888777654
No 395
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=60.39 E-value=24 Score=30.51 Aligned_cols=18 Identities=17% Similarity=0.248 Sum_probs=7.1
Q ss_pred HHHHhcccChHHHHHHHH
Q 001314 774 ADHLSDVKCFEDAATTYF 791 (1102)
Q Consensus 774 Ad~L~~~~~~eeAa~~Y~ 791 (1102)
|..+...++|++|...|.
T Consensus 11 g~~~~~~~~~~~A~~~~~ 28 (111)
T 2l6j_A 11 GNSLFKQGLYREAVHCYD 28 (111)
T ss_dssp HHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHH
Confidence 333333444444444333
No 396
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=59.24 E-value=3.1e+02 Score=33.29 Aligned_cols=61 Identities=16% Similarity=0.111 Sum_probs=38.4
Q ss_pred ceeeeeecCCCCeEEEEEeeCCC--CeEEEEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEe
Q 001314 51 TVELLKWNCMSDLLAAVVRFEEY--DSVKICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWT 116 (1102)
Q Consensus 51 ~v~~L~Wn~DS~iLAv~~~~~~~--~~vqLWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t 116 (1102)
.+....||+||+.||........ ..|.+|....-.+ +...+.- .....+.|+|. . .|++.+
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~-~~~~~~~--~~~~~~~wspD-~-~l~~~~ 226 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKP-LADELKW--VKFSGLAWLGN-D-ALLYSR 226 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCE-EEEEEEE--EESCCCEESTT-S-EEEEEE
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC-CCccCCC--ceeccEEEECC-C-EEEEEE
Confidence 58889999999999998865444 3688898877665 2222211 00024788876 3 344433
No 397
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=58.72 E-value=46 Score=33.55 Aligned_cols=19 Identities=5% Similarity=-0.106 Sum_probs=12.1
Q ss_pred hHHHhhhcHHHHHHHHHHc
Q 001314 716 TIDLRLQRFENALKHIVSM 734 (1102)
Q Consensus 716 ~Id~~LkryekAl~hl~~~ 734 (1102)
.+....+++++|+.+|.++
T Consensus 26 ~~~~~~~~~~~A~~~~~~a 44 (212)
T 3rjv_A 26 DTWVSSGDYQKAEYWAQKA 44 (212)
T ss_dssp HHHHHHTCHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHH
Confidence 3333467777777777765
No 398
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=58.20 E-value=90 Score=27.40 Aligned_cols=22 Identities=23% Similarity=0.092 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHcCChHHHHHHH
Q 001314 829 LAQELCEELQALGKPGEAAKIA 850 (1102)
Q Consensus 829 l~~~lA~~L~~~g~~~eAa~i~ 850 (1102)
....+|..+...|++.+|...|
T Consensus 55 ~~~~la~~~~~~g~~~~A~~~~ 76 (115)
T 2kat_A 55 AWKWLGKTLQGQGDRAGARQAW 76 (115)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHH
Confidence 4555666666666666666654
No 399
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=58.10 E-value=1.9e+02 Score=30.53 Aligned_cols=67 Identities=10% Similarity=0.056 Sum_probs=49.5
Q ss_pred CceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
+.+...|.|+++++ . ...|..|.++|-..-+|..+. ...+....+.+||.+|.... ....+|+.++.
T Consensus 40 ~~~~~~pdG~ilvs-~-------~~~V~~~d~~G~~~W~~~~~~--~~~~~~~~~~~dG~~lv~~~--~~~~~v~~vd~ 106 (276)
T 3no2_A 40 NSVAATKAGEILFS-Y-------SKGAKMITRDGRELWNIAAPA--GCEMQTARILPDGNALVAWC--GHPSTILEVNM 106 (276)
T ss_dssp CEEEECTTSCEEEE-C-------BSEEEEECTTSCEEEEEECCT--TCEEEEEEECTTSCEEEEEE--STTEEEEEECT
T ss_pred cCeEECCCCCEEEe-C-------CCCEEEECCCCCEEEEEcCCC--CccccccEECCCCCEEEEec--CCCCEEEEEeC
Confidence 34677899999994 2 347999999999888888862 23577888999999988764 22346776654
No 400
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=56.60 E-value=13 Score=31.03 Aligned_cols=25 Identities=16% Similarity=0.020 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 828 KLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 828 ~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.....+|..+...|++.+|...|.+
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~ 68 (91)
T 1na3_A 44 EAWYNLGNAYYKQGDYDEAIEYYQK 68 (91)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3556677778888888888877654
No 401
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=56.29 E-value=2.2e+02 Score=30.62 Aligned_cols=82 Identities=10% Similarity=-0.051 Sum_probs=48.1
Q ss_pred CCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeC-------CCCeEEEEEcccceEEEEEEEEeccC
Q 001314 26 CPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFE-------EYDSVKICFFSNNHWYLKYEIRYLRR 97 (1102)
Q Consensus 26 ~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~-------~~~~vqLWt~~NYHWYLKqei~~~~~ 97 (1102)
...|..|+.. |-....+.... ....+..++|+.++.+..... +...|..|+..+.. ++..+..+..
T Consensus 151 ~~~v~viD~~t~~~~~~i~~g~----~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--v~~~~~~~~g 224 (328)
T 3dsm_A 151 QNRILKIDTETDKVVDELTIGI----QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--VEKQFKFKLG 224 (328)
T ss_dssp CCEEEEEETTTTEEEEEEECSS----CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--EEEEEECCTT
T ss_pred CCEEEEEECCCCeEEEEEEcCC----CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--EEEEEecCCC
Confidence 3578888754 44444444432 356788999999655543110 02689999998876 4556655432
Q ss_pred CC-ceEEecCCCCceEEE
Q 001314 98 DG-IRFMWHPTKPLQLIC 114 (1102)
Q Consensus 98 ~~-~~~~W~~e~pl~L~i 114 (1102)
.. ..+.|+|.... |++
T Consensus 225 ~~p~~la~~~d~~~-lyv 241 (328)
T 3dsm_A 225 DWPSEVQLNGTRDT-LYW 241 (328)
T ss_dssp CCCEEEEECTTSCE-EEE
T ss_pred CCceeEEEecCCCE-EEE
Confidence 22 34777775443 444
No 402
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=55.92 E-value=1e+02 Score=31.87 Aligned_cols=66 Identities=6% Similarity=0.073 Sum_probs=44.3
Q ss_pred CCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHc
Q 001314 761 TDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQAL 840 (1102)
Q Consensus 761 ~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~ 840 (1102)
.++..+-.+|..||+++. +++...+.+.|.- + .....|. .+..++...|..|+..
T Consensus 74 kND~RYLklWl~Ya~~~~--------------~~~~~~p~~if~~------L--~~~~IG~---~~AlfYe~wA~~lE~~ 128 (202)
T 3esl_A 74 RNDPRFLKIWIWYINLFL--------------SNNFHESENTFKY------M--FNKGIGT---KLSLFYEEFSKLLENA 128 (202)
T ss_dssp TTCHHHHHHHHHHHHHHS--------------TTCHHHHHHHHHH------H--HHHTSST---TBHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHhhc--------------ccccCCHHHHHHH------H--HHCCCcH---HHHHHHHHHHHHHHHc
Confidence 356677889999999872 2334444444432 0 1122332 2357899999999999
Q ss_pred CChHHHHHHHH
Q 001314 841 GKPGEAAKIAL 851 (1102)
Q Consensus 841 g~~~eAa~i~l 851 (1102)
|++.+|..||.
T Consensus 129 g~~~~A~~Vy~ 139 (202)
T 3esl_A 129 QFFLEAKVLLE 139 (202)
T ss_dssp TCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999999984
No 403
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=55.45 E-value=2e+02 Score=29.89 Aligned_cols=73 Identities=8% Similarity=-0.122 Sum_probs=43.5
Q ss_pred ceeeccCCCeEEEEeecc---------CCCCCCeEEEEecCCcceeeeecCCccccceeeeeec----CCCCeEEEEEee
Q 001314 4 VLEWMPSGANIAAVYDRK---------SENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWN----CMSDLLAAVVRF 70 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~---------~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn----~DS~iLAv~~~~ 70 (1102)
.+++-|.|++.+++.... .......|..|+.+|-...-+ . .......+.|+ +|++.|-+..
T Consensus 121 ~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~--~--~~~~~~~i~~~~~~d~dg~~l~v~~-- 194 (314)
T 1pjx_A 121 DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQMIQVD--T--AFQFPNGIAVRHMNDGRPYQLIVAE-- 194 (314)
T ss_dssp EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCEEEEE--E--EESSEEEEEEEECTTSCEEEEEEEE--
T ss_pred CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCEEEec--c--CCCCcceEEEecccCCCCCEEEEEE--
Confidence 578889999888765210 000014677787664322111 1 11246789999 9998666543
Q ss_pred CCCCeEEEEEcc
Q 001314 71 EEYDSVKICFFS 82 (1102)
Q Consensus 71 ~~~~~vqLWt~~ 82 (1102)
...+.|..|+..
T Consensus 195 ~~~~~i~~~~~~ 206 (314)
T 1pjx_A 195 TPTKKLWSYDIK 206 (314)
T ss_dssp TTTTEEEEEEEE
T ss_pred CCCCeEEEEECC
Confidence 335689999864
No 404
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=55.15 E-value=1e+02 Score=37.73 Aligned_cols=201 Identities=9% Similarity=-0.007 Sum_probs=0.0
Q ss_pred HHHHHHHHh-hcchHHHHHHHH-------------hccCHHHHHHHHHHhcCCc--------chhhHHHHHHhcCChhhh
Q 001314 656 EEALKHLLW-LADSEAVYEAAL-------------GLYDLNLAAIVALNSQRDP--------KEFLPYLQELESMPPLLM 713 (1102)
Q Consensus 656 e~alk~l~f-LvDvn~Ly~~AL-------------g~YDl~Lal~VAq~sqkDP--------kEYLpfL~~L~~le~~~r 713 (1102)
|.||.++-. =.+...+++..+ ..-.++.|..|.+.+-.-| ++|..|-+.+ .....
T Consensus 171 ErAl~~vG~~d~~s~~iW~~Yi~f~~~~~~~~~~eeq~~~~~~R~iy~raL~iP~~~~~~~w~~Y~~fe~~~---~~~~a 247 (679)
T 4e6h_A 171 QVVVDKCAIFEPKSIQFWNEYLHFLEHWKPVNKFEEQQRVQYIRKLYKTLLCQPMDCLESMWQRYTQWEQDV---NQLTA 247 (679)
T ss_dssp HHHHHHTTTTCSSCHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTTSCCSSHHHHHHHHHHHHHHH---CTTTH
T ss_pred HHHHHHhCcccccchHHHHHHHHHHHhccccCcHHHHhHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHhc---CcchH
Q ss_pred chhHHHhhhcHHHHHHHHHH----------------------------------------------cCCCcHHHHHHHHH
Q 001314 714 RYTIDLRLQRFENALKHIVS----------------------------------------------MGDSYHADCLNLMK 747 (1102)
Q Consensus 714 r~~Id~~LkryekAl~hl~~----------------------------------------------~g~~~~deAie~~~ 747 (1102)
+-.|....+.|+.|...+.+ ......+.....-+
T Consensus 248 ~~~~~e~~~~y~~Ar~~~~e~~~~~~~l~r~~p~~~~~~~~~~~p~~~~~~~~ql~lW~~yi~fEk~~~~~l~~~~~~~R 327 (679)
T 4e6h_A 248 RRHIGELSAQYMNARSLYQDWLNITKGLKRNLPITLNQATESNLPKPNEYDVQQLLIWLEWIRWESDNKLELSDDLHKAR 327 (679)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCSSSTTCCTTTSCCTTCCCHHHHHHHHHHHHHHHTCTTCCCHHHHHHH
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHhHhhccccccccchhccCCCCchhHHHHHHHHHHHHHHHHhCCccccchhhHHH
Q ss_pred HHhcchHHHHhccCCcHhHHHHHHHHHHHHhcccChHHHH-HHHHHc---------------------CCHHHHHHHHHH
Q 001314 748 KYAQLFPLGLKLITDPAKMEQVLEAWADHLSDVKCFEDAA-TTYFCC---------------------SSLEKAMKAYRA 805 (1102)
Q Consensus 748 ~~~~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~~~~~eeAa-~~Y~~a---------------------g~~ekAl~~y~~ 805 (1102)
-. .+|++||..+.. ...++-.||+++...++.++|. .+|.+| |++++|-+.|.+
T Consensus 328 v~-~~Ye~aL~~~p~---~~~lW~~ya~~~~~~~~~~~a~r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek 403 (679)
T 4e6h_A 328 MT-YVYMQAAQHVCF---APEIWFNMANYQGEKNTDSTVITKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILS 403 (679)
T ss_dssp HH-HHHHHHHHHTTT---CHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HH-HHHHHHHHHcCC---CHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHH
Q ss_pred cCC------------------------------HHHHHHHHhhcCCChHHHHHHHHHHHHHHHH-----cCChHHHHHHH
Q 001314 806 SGN------------------------------WSGVLTVAGLLKLGKDEVAKLAQELCEELQA-----LGKPGEAAKIA 850 (1102)
Q Consensus 806 ag~------------------------------W~~al~lA~~l~~~~~el~~l~~~lA~~L~~-----~g~~~eAa~i~ 850 (1102)
+-. |-..+.+.++.+ .+...-.-+...+.. ..-|..+|.+.
T Consensus 404 ~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~----~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE 479 (679)
T 4e6h_A 404 CIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQ----GLAASRKIFGKCRRLKKLVTPDIYLENAYIE 479 (679)
T ss_dssp HHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH----CHHHHHHHHHHHHHTGGGSCTHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhcCCCChHHHHHHHHHH
Q ss_pred HHhcCCHHHHHHHHHHh
Q 001314 851 LDYCGDVTNGISLLIDA 867 (1102)
Q Consensus 851 l~ylgD~e~AI~~y~~~ 867 (1102)
....+|++.|-.+|-++
T Consensus 480 ~~~~~d~e~Ar~ife~~ 496 (679)
T 4e6h_A 480 YHISKDTKTACKVLELG 496 (679)
T ss_dssp HTTTSCCHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHH
No 405
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=54.88 E-value=38 Score=28.01 Aligned_cols=11 Identities=27% Similarity=0.407 Sum_probs=5.9
Q ss_pred cCCHHHHHHHH
Q 001314 854 CGDVTNGISLL 864 (1102)
Q Consensus 854 lgD~e~AI~~y 864 (1102)
.|++++|+..|
T Consensus 56 ~~~~~~A~~~~ 66 (91)
T 1na3_A 56 QGDYDEAIEYY 66 (91)
T ss_dssp TTCHHHHHHHH
T ss_pred HhhHHHHHHHH
Confidence 55555555544
No 406
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=53.81 E-value=29 Score=35.14 Aligned_cols=16 Identities=13% Similarity=0.044 Sum_probs=8.5
Q ss_pred cCCcchhhHHHHHHhc
Q 001314 692 QRDPKEFLPYLQELES 707 (1102)
Q Consensus 692 qkDPkEYLpfL~~L~~ 707 (1102)
++|+.+=+.++++.-.
T Consensus 31 ~~~~~~A~~~~~~a~~ 46 (212)
T 3rjv_A 31 SGDYQKAEYWAQKAAA 46 (212)
T ss_dssp HTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 3566555555555443
No 407
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=53.67 E-value=1e+02 Score=32.66 Aligned_cols=103 Identities=8% Similarity=-0.017 Sum_probs=60.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEe---cCCcce--eee-ecCCccccceeeeeecCCCCeEEEEEeeCCCCeEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYE---RNGLER--SSF-DINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVK 77 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFE---RNGLrh--geF-~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vq 77 (1102)
.++|.|.|+.+..+... ...|..|. .+|... ..| +++. ......+|+.++||.+.... ....+|.
T Consensus 153 gi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~---~~~~~v~ 223 (297)
T 3g4e_A 153 GLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVAC---YNGGRVI 223 (297)
T ss_dssp EEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEE---ETTTEEE
T ss_pred ceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCC-CCCCCCeeEECCCCCEEEEE---cCCCEEE
Confidence 47899999855444321 35677776 455421 122 2321 12357789999999865443 3356799
Q ss_pred EEEcccceEEEEEEEEeccCCCceEEecCCCCceEEEEee
Q 001314 78 ICFFSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTL 117 (1102)
Q Consensus 78 LWt~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~ 117 (1102)
.|+..+-. +..++..+.....++.|...+.-+|+|.+.
T Consensus 224 ~~d~~tG~--~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 224 RLDPVTGK--RLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EECTTTCC--EEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred EEcCCCce--EEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 99876444 345666654333567887333345777554
No 408
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=51.47 E-value=88 Score=35.27 Aligned_cols=50 Identities=18% Similarity=0.227 Sum_probs=33.1
Q ss_pred CCeEEEEEcccceEEEEEEEEeccCCC-ce-EEecCCCCceEEEEeeCCcEEEEEE
Q 001314 73 YDSVKICFFSNNHWYLKYEIRYLRRDG-IR-FMWHPTKPLQLICWTLDGQITTYNF 126 (1102)
Q Consensus 73 ~~~vqLWt~~NYHWYLKqei~~~~~~~-~~-~~W~~e~pl~L~i~t~~g~~~~~~~ 126 (1102)
...|.||+..+-+ +.+.+. +..+. ++ +.|+|...+ |+-+..+|.+.++++
T Consensus 304 DgTIkIWDl~tGk--~l~tL~-gH~~~vvs~vafSPDG~~-LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQ--CTALLP-PVSDQHWSFVKWSGTDSH-LLAGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCS--EEEEEC-CC--CCCCEEEECSSSSE-EEEECTTSCEEEEEE
T ss_pred CCcEEEEECCCCc--EEEEec-CCCCCeEEEEEECCCCCE-EEEEECCCcEEEecC
Confidence 3479999998866 233332 22233 43 799998776 788788888887553
No 409
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=51.14 E-value=33 Score=34.13 Aligned_cols=57 Identities=11% Similarity=0.229 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcC
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALG 841 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g 841 (1102)
.+..||.-|...++++.+...- +.+++|+.+|.+ |+.+--. ..+.+..++..+.+.|
T Consensus 38 a~~n~G~~l~~l~~~~~g~~al---~~~~eAi~~le~------AL~ldP~-------~~~A~~~LG~ay~~lg 94 (158)
T 1zu2_A 38 NLTRWGGVLLELSQFHSISDAK---QMIQEAITKFEE------ALLIDPK-------KDEAVWCIGNAYTSFA 94 (158)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHH---HHHHHHHHHHHH------HHHHCTT-------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccchhhhhH---hHHHHHHHHHHH------HHHhCcC-------cHHHHHHHHHHHHHhc
Confidence 4555777776666665433322 247778877665 5544211 1234555666666554
No 410
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=50.73 E-value=1e+02 Score=37.97 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=39.7
Q ss_pred ceeec-cCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEe
Q 001314 4 VLEWM-PSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVR 69 (1102)
Q Consensus 4 ~LsWr-PsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~ 69 (1102)
..+|. |.|++||-+.... +.+...|.+++-.|-+ + .++...+....++.|++||.-|+....
T Consensus 178 ~~~~S~PDG~~lAy~~~~~-G~~~~~l~v~dl~~g~--~-~l~~~~~~~~~~~~WspDg~~l~y~~~ 240 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMS-GNEVYTIEFKRISDPS--Q-TIADKVSGTNGEIVWGPDHTSLFYVTK 240 (751)
T ss_dssp EEEECTTTTCEEEEEEESS-SSSCEEEEEEETTCTT--C-CCCCCEEEECSCCEECSSTTEEEEEEE
T ss_pred eeEecCCCCCEEEEEEeCC-CCceEEEEEEECCCCC--E-eCCccccCceeeEEEecCCCEEEEEEE
Confidence 47899 9999999876543 2234568888766630 2 123211112457999999988887753
No 411
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=50.31 E-value=12 Score=37.50 Aligned_cols=14 Identities=21% Similarity=0.290 Sum_probs=7.8
Q ss_pred hhhcHHHHHHHHHH
Q 001314 720 RLQRFENALKHIVS 733 (1102)
Q Consensus 720 ~LkryekAl~hl~~ 733 (1102)
.+++|++|++.+.+
T Consensus 14 r~~~feeA~~~~~~ 27 (158)
T 1zu2_A 14 RILLFEQIRQDAEN 27 (158)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHH
Confidence 45556666655554
No 412
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=49.84 E-value=72 Score=27.73 Aligned_cols=17 Identities=18% Similarity=0.284 Sum_probs=8.8
Q ss_pred HHHHHcCCHHHHHHHHH
Q 001314 788 TTYFCCSSLEKAMKAYR 804 (1102)
Q Consensus 788 ~~Y~~ag~~ekAl~~y~ 804 (1102)
.+|...|++++|+++|.
T Consensus 49 ~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 49 KLYERLDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHTTCHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHH
Confidence 34455555555555544
No 413
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=49.76 E-value=1.2e+02 Score=30.35 Aligned_cols=58 Identities=7% Similarity=-0.137 Sum_probs=42.8
Q ss_pred ChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcCC-----------------------------HH---HHHHHHHHhcC
Q 001314 822 GKDEVAKLAQELCEELQALGKPGEAAKIALDYCGD-----------------------------VT---NGISLLIDARD 869 (1102)
Q Consensus 822 ~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylgD-----------------------------~e---~AI~~y~~~~~ 869 (1102)
+++...++..-+|+.+...|.|..|...|.+.+.. +| .+..||++.++
T Consensus 58 sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~ 137 (167)
T 3ffl_A 58 SPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQ 137 (167)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCC
Confidence 44555567888999999999999999988652110 11 46789999999
Q ss_pred HHHHHHHHHh
Q 001314 870 WEEALRVAFM 879 (1102)
Q Consensus 870 W~eA~rLa~~ 879 (1102)
|++|+.+...
T Consensus 138 ~~~Ai~~Le~ 147 (167)
T 3ffl_A 138 DKDAIAILDG 147 (167)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhc
Confidence 9999876554
No 414
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=49.29 E-value=27 Score=34.65 Aligned_cols=27 Identities=22% Similarity=0.304 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHH
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFC 792 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~ 792 (1102)
...++..||.+|+..++|++|..+|..
T Consensus 100 ~AlfYe~wA~~lE~~g~~~~A~~Vy~~ 126 (152)
T 4a1g_A 100 SSPLYIAWAGHLEAQGELQHASAVLQR 126 (152)
T ss_dssp BHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 346677777777777777777666655
No 415
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=49.16 E-value=2e+02 Score=30.25 Aligned_cols=109 Identities=8% Similarity=-0.083 Sum_probs=58.4
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCC--cceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNG--LERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNG--LrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
.++|.|.|+.+..+......+....|..|.-++ +..++.-... ......+|.+++||.+ |+.+ .+.|..|+.
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~-~~~~pdgi~~d~~G~l---wv~~--~~gv~~~~~ 265 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV-PDGLPDGFCVDRGGWL---WSSS--GTGVCVFDS 265 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC-SSSCCCSEEECTTSCE---EECC--SSEEEEECT
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC-CCCCCCeEEECCCCCE---EEec--CCcEEEECC
Confidence 478999998655544221000125677777543 2222211111 1123567899999994 4422 567999987
Q ss_pred ccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEE
Q 001314 82 SNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTY 124 (1102)
Q Consensus 82 ~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~ 124 (1102)
..-. ...+..+. ...++.|++ +.-+|++.+ .+.+..+
T Consensus 266 ~g~~---~~~~~~~~-~~~~~~f~~-d~~~L~it~-~~~l~~~ 302 (305)
T 3dr2_A 266 DGQL---LGHIPTPG-TASNCTFDQ-AQQRLFITG-GPCLWML 302 (305)
T ss_dssp TSCE---EEEEECSS-CCCEEEECT-TSCEEEEEE-TTEEEEE
T ss_pred CCCE---EEEEECCC-ceeEEEEeC-CCCEEEEEc-CCeEEEE
Confidence 5432 34444433 224578884 344578744 4555443
No 416
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=48.86 E-value=49 Score=30.65 Aligned_cols=59 Identities=24% Similarity=0.232 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHh---cCCHHHHHHH-----HHHhcCHHHHHHHHHhcCChhhHH
Q 001314 827 AKLAQELCEELQALGKPGEAAKIALDY---CGDVTNGISL-----LIDARDWEEALRVAFMHRREDLIT 887 (1102)
Q Consensus 827 ~~l~~~lA~~L~~~g~~~eAa~i~l~y---lgD~e~AI~~-----y~~~~~W~eA~rLa~~h~~~dL~e 887 (1102)
+.+..++|-.=.-.+.++||..|. ++ -++ +++|.| +..-+.|++|+++...+--|||..
T Consensus 7 ~~lLAE~AL~gTG~H~HqEA~tIA-dwL~~~~~-~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c~pdlep 73 (116)
T 2p58_C 7 NVLLAEIALIGTGNHYHEEANCIA-EWLHLKGE-EEAVQLIRLSSLMNRGDYASALQQGNKLAYPDLEP 73 (116)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHH-HHHHHTTC-HHHHHHHHHHHHHHTTCHHHHHHHHTTSCCGGGHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHH-HHHHhCCc-HHHHHHHHHHHHHcchhHHHHHHhcCCCCCchHHH
Confidence 344444544444556666666664 33 245 555544 567789999999999988888743
No 417
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=48.73 E-value=2.9e+02 Score=31.26 Aligned_cols=20 Identities=20% Similarity=0.051 Sum_probs=17.0
Q ss_pred HHHHHhcccHHHHHHHHHhc
Q 001314 490 IVNALIQGRFRDALVMVRRH 509 (1102)
Q Consensus 490 ir~~L~~~~Y~~Af~~~Rkh 509 (1102)
-..++.+++|.+|+.++++-
T Consensus 10 a~~~~~~g~~~~A~~~~~~a 29 (452)
T 3e4b_A 10 ANEALKRGDTVTAQQNYQQL 29 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHHHHH
Confidence 45678899999999999985
No 418
>3myf_A Sensor protein; HPT, histidine kinase, PSI, MCSG, structural genomics, midwe for structural genomics, protein structure initiative, TRAN; HET: MSE; 1.80A {Shewanella SP}
Probab=47.92 E-value=1.4e+02 Score=27.84 Aligned_cols=72 Identities=17% Similarity=0.198 Sum_probs=46.6
Q ss_pred chHHHHhcc-CCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcC-----CChHH
Q 001314 752 LFPLGLKLI-TDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLK-----LGKDE 825 (1102)
Q Consensus 752 Ly~~AL~L~-~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~-----~~~~e 825 (1102)
.|+.++++. ++++-.+++...+-+.+.. .-.+++.....++|+.+..+|.++. .+-..
T Consensus 7 D~~~~l~~~~g~~~L~~~lL~~fl~~~~~----------------~~~~l~~a~~~~d~~~l~~~aHkLkGaa~~~Ga~~ 70 (119)
T 3myf_A 7 NWDLCLTQANHKSNLALEMLKMLLDSLPE----------------TVEKIQTALGQNDQATMLSTIHKLHGASCYCGVPT 70 (119)
T ss_dssp CHHHHHHHTTTCHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTTTCHH
T ss_pred CHHHHHHHhCCCHHHHHHHHHHHHHhHHH----------------HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCHHH
Confidence 688899988 6777777777776665533 2345566666777877777766542 23345
Q ss_pred HHHHHHHHHHHHHH
Q 001314 826 VAKLAQELCEELQA 839 (1102)
Q Consensus 826 l~~l~~~lA~~L~~ 839 (1102)
+..++..+=..+.+
T Consensus 71 L~~~~~~LE~~~r~ 84 (119)
T 3myf_A 71 TQRLCQEIESALKR 84 (119)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc
Confidence 66666666555553
No 419
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=46.81 E-value=26 Score=33.14 Aligned_cols=26 Identities=19% Similarity=0.100 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhc----ccChHHHHHHHHHc
Q 001314 768 QVLEAWADHLSD----VKCFEDAATTYFCC 793 (1102)
Q Consensus 768 ~i~~~yAd~L~~----~~~~eeAa~~Y~~a 793 (1102)
..+...|..+.. .+++++|...|.+|
T Consensus 58 ~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~A 87 (138)
T 1klx_A 58 NGCRFLGDFYENGKYVKKDLRKAAQYYSKA 87 (138)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCccHHHHHHHHHHH
Confidence 344455655555 66777777777665
No 420
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=46.65 E-value=62 Score=27.46 Aligned_cols=53 Identities=15% Similarity=0.128 Sum_probs=32.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHH-HHHHHHHHHHHcCChHHHHHHHH
Q 001314 786 AATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAK-LAQELCEELQALGKPGEAAKIAL 851 (1102)
Q Consensus 786 Aa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~-l~~~lA~~L~~~g~~~eAa~i~l 851 (1102)
.+..|...|++++|++.|.+ ++.+ .+.+ .. ....+|..+...|++.+|...|.
T Consensus 6 ~a~~~~~~~~~~~A~~~~~~------al~~---~p~~----~~~~~~~lg~~~~~~~~~~~A~~~~~ 59 (99)
T 2kc7_A 6 TIKELINQGDIENALQALEE------FLQT---EPVG----KDEAYYLMGNAYRKLGDWQKALNNYQ 59 (99)
T ss_dssp HHHHHHHHTCHHHHHHHHHH------HHHH---CSST----HHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH------HHHH---CCCc----HHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34556667888888888765 3332 1112 13 56667777777777777777653
No 421
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=46.42 E-value=52 Score=42.32 Aligned_cols=80 Identities=5% Similarity=-0.122 Sum_probs=52.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHhhc------CCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcCC--------HHHHHH
Q 001314 797 EKAMKAYRASGNWSGVLTVAGLL------KLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGD--------VTNGIS 862 (1102)
Q Consensus 797 ekAl~~y~~ag~W~~al~lA~~l------~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylgD--------~e~AI~ 862 (1102)
.--|++|.++|++++|+.+-..+ +..++ + ..+..|...|...|+..+|.++|.+...+ +...|.
T Consensus 131 naLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd-v-vTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PDvvTYntLI~ 208 (1134)
T 3spa_A 131 LAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT-L-DMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPDLLSYAAALQ 208 (1134)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC-H-HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC-H-hHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence 34455666666666665554221 11121 1 36888888999999999999998775322 677889
Q ss_pred HHHHhcC-HHHHHHHHH
Q 001314 863 LLIDARD-WEEALRVAF 878 (1102)
Q Consensus 863 ~y~~~~~-W~eA~rLa~ 878 (1102)
+||+.++ +++|.++..
T Consensus 209 glcK~G~~~e~A~~Ll~ 225 (1134)
T 3spa_A 209 CMGRQDQDAGTIERCLE 225 (1134)
T ss_dssp HHHHHTCCHHHHHHHHH
T ss_pred HHHhCCCcHHHHHHHHH
Confidence 9999887 467776543
No 422
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=45.68 E-value=50 Score=30.56 Aligned_cols=60 Identities=23% Similarity=0.204 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHh---cCCHHHHHHH-----HHHhcCHHHHHHHHHhcCChhhHH
Q 001314 826 VAKLAQELCEELQALGKPGEAAKIALDY---CGDVTNGISL-----LIDARDWEEALRVAFMHRREDLIT 887 (1102)
Q Consensus 826 l~~l~~~lA~~L~~~g~~~eAa~i~l~y---lgD~e~AI~~-----y~~~~~W~eA~rLa~~h~~~dL~e 887 (1102)
++.+..++|-.=.-.+.++||..|. ++ -++ +++|.| +..-+.|++|+++...+--|||..
T Consensus 5 l~~lLAE~AL~gTG~H~HqEA~tIA-dwL~~~~~-~E~v~lIR~sSLmNrG~Yq~Al~l~~~~c~pdlep 72 (115)
T 2uwj_G 5 LIRELAELALAGSGQHCHEEALCIA-EWLERLGQ-DEAARLIRISSLANQGRYQEALAFAHGNPWPALEP 72 (115)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHH-HHHHHTTC-HHHHHHHHHHHHHHTTCHHHHHGGGTTCCCGGGHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHH-HHHHhCCc-HHHHHHHHHHHHHcchhHHHHHHhcCCCCCchHHH
Confidence 3444445554445556666666664 33 245 555544 567789999999999888888743
No 423
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=44.71 E-value=1.6e+02 Score=33.12 Aligned_cols=69 Identities=6% Similarity=-0.031 Sum_probs=45.6
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEccc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~N 83 (1102)
.|+|-|.|+++++.. ..+.|..|..+|-....+.-.. . ... ++|++|++.|.+.- ....+.|..|+...
T Consensus 135 ~la~d~~g~lyv~d~------~~~~I~~id~~~g~~~~~~~~~--~-~~~-ia~~~~g~~l~~~d-~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQR------DDPRVRLISVDDNKVTTVHPGF--K-GGK-PAVTKDKQRVYSIG-WEGTHTVYVYMKAS 203 (409)
T ss_dssp EEEECSTTEEEEEET------TTTEEEEEETTTTEEEEEEETC--C-BCB-CEECTTSSEEEEEB-SSTTCEEEEEEGGG
T ss_pred EEEEeCCCCEEEEec------CCCcEEEEECCCCEEEEeeccC--C-CCc-eeEecCCCcEEEEe-cCCCceEEEEEcCC
Confidence 578999999888754 3568888988864444433221 1 233 99999999777653 12223788888764
No 424
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=44.62 E-value=62 Score=28.80 Aligned_cols=63 Identities=6% Similarity=-0.081 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHH
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAK 848 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~ 848 (1102)
-|-..|.++...++|..|..-|.. |++.+..... .+.+ ...+...+|..+.+.|++..|..
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~------Al~~~~~~~~----------~~~~---~~~i~~~L~~~~~~~g~~~~A~~ 67 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQ------ALRQLDEGEI----------STID---KVSVLDYLSYAVYQQGDLDKALL 67 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH------HHHHHHTTCC----------CSSC---HHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHH------HHHhhhccCC----------Cccc---HHHHHHHHHHHHHHccCHHHHHH
Confidence 355678888888888888777654 3444322110 1122 23566777777766677666666
Q ss_pred HH
Q 001314 849 IA 850 (1102)
Q Consensus 849 i~ 850 (1102)
.+
T Consensus 68 ~~ 69 (104)
T 2v5f_A 68 LT 69 (104)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 425
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=44.44 E-value=5.6e+02 Score=33.15 Aligned_cols=121 Identities=12% Similarity=0.127 Sum_probs=71.7
Q ss_pred hhchhHHHhhhcHHHHHHHHHHcCC-----------------------------CcHHHHHHHHHHHhcchHHHHhcc--
Q 001314 712 LMRYTIDLRLQRFENALKHIVSMGD-----------------------------SYHADCLNLMKKYAQLFPLGLKLI-- 760 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~g~-----------------------------~~~deAie~~~~~~~Ly~~AL~L~-- 760 (1102)
+.++.+....|+|++|..+|.++.. .++..++.+..++ +.|+.|+++.
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~-~~~~~vi~fa~l 924 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEE-SAYIDALEFSLL 924 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHT-SCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHc-CCHHHHHHHHHH
Confidence 5666777789999999999988621 1245677777888 8888888765
Q ss_pred ------CCcHhHH-HHHHHHHHHHhcccChHHHHHHHHHc-------CCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHH
Q 001314 761 ------TDPAKME-QVLEAWADHLSDVKCFEDAATTYFCC-------SSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEV 826 (1102)
Q Consensus 761 ------~d~~~~~-~i~~~yAd~L~~~~~~eeAa~~Y~~a-------g~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el 826 (1102)
.+++..+ .++...=.+.-+.++|++|-..-.+. .+..+-+....+.+..+..+.+- +.--.+++
T Consensus 925 Ai~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~pd~~~r~~cLr~LV~~lce~~~~~~L~~lp--f~gl~~~V 1002 (1139)
T 4fhn_B 925 ADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVLSTTPLKKSCLLDFVNQLTKQGKINQLLNYS--MPTLRQDV 1002 (1139)
T ss_dssp HHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHHHHSSSCHHHHHHHHHHHHHHCCHHHHHHHT--TTSCHHHH
T ss_pred HHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCChhhhhCCC--CccHHHHH
Confidence 2333333 35555555566778888875444332 12233334445566666665431 11123455
Q ss_pred HHHHHHHHH
Q 001314 827 AKLAQELCE 835 (1102)
Q Consensus 827 ~~l~~~lA~ 835 (1102)
.++....|.
T Consensus 1003 d~IL~~kAr 1011 (1139)
T 4fhn_B 1003 DNLLERKAF 1011 (1139)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 556555554
No 426
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=44.37 E-value=28 Score=40.16 Aligned_cols=84 Identities=12% Similarity=-0.089 Sum_probs=42.6
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHcCCH-----------HHHHHHHHHcCCHHHHHHHHhhcC------CChHHHHHHHH
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCCSSL-----------EKAMKAYRASGNWSGVLTVAGLLK------LGKDEVAKLAQ 831 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~ag~~-----------ekAl~~y~~ag~W~~al~lA~~l~------~~~~el~~l~~ 831 (1102)
.....|+|+.+.|++++|..+|.++-.+ -.-++++...++|..+.....+.. .+.+....+-.
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~ 212 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKT 212 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHH
Confidence 3344555555556666665555544221 123455555666666654443321 11111122323
Q ss_pred HHHHHHHHcCChHHHHHHHHH
Q 001314 832 ELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 832 ~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
-.|-.+...++|.+|+..|++
T Consensus 213 ~~gl~~l~~r~f~~Aa~~f~e 233 (429)
T 4b4t_R 213 YYGIHCLAVRNFKEAAKLLVD 233 (429)
T ss_dssp HHHHGGGGTSCHHHHHHHHHH
T ss_pred HHHHHHHHhChHHHHHHHHHH
Confidence 334444567889998888876
No 427
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=43.77 E-value=3.7e+02 Score=29.71 Aligned_cols=84 Identities=7% Similarity=-0.065 Sum_probs=53.5
Q ss_pred ceeeccCCCeEEEEeeccC----CCCCCeEEEEecCCc-ceeeeecCCcc----ccceeeeeecCCCCeEEEEEeeCCCC
Q 001314 4 VLEWMPSGANIAAVYDRKS----ENKCPSIVFYERNGL-ERSSFDINEQI----DSTVELLKWNCMSDLLAAVVRFEEYD 74 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~----~~~~~~VvFFERNGL-rhgeF~L~~~~----~~~v~~L~Wn~DS~iLAv~~~~~~~~ 74 (1102)
.+.+.|.|..+..+....+ +.....|.+|+-..+ .-+++.++.+. ...-..+.|++||..|.|.... ..+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~-~~~ 148 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA-AGP 148 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC-CCC
Confidence 5788999998888753210 012356878887544 44667665211 1224589999999999997521 246
Q ss_pred eEEEEEcccceEEEEEE
Q 001314 75 SVKICFFSNNHWYLKYE 91 (1102)
Q Consensus 75 ~vqLWt~~NYHWYLKqe 91 (1102)
.|.+++ .... +..+
T Consensus 149 ~v~viD-~t~~--~~~~ 162 (373)
T 2mad_H 149 AVGLVV-QGGS--SDDQ 162 (373)
T ss_pred eEEEEE-CCCC--EEeE
Confidence 798888 6544 3444
No 428
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=43.24 E-value=96 Score=32.39 Aligned_cols=68 Identities=9% Similarity=0.087 Sum_probs=47.8
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.+++-|.|++.++.. ....|..|..+ |-....+.+|. ..+..+++++|+..|-|.. .....|..|...
T Consensus 230 ~i~~d~~G~l~v~~~------~~~~i~~~d~~~g~~~~~~~~~~---~~~~~i~~~~dg~~l~v~~--~~~~~l~~~~~~ 298 (314)
T 1pjx_A 230 GMDFDEDNNLLVANW------GSSHIEVFGPDGGQPKMRIRCPF---EKPSNLHFKPQTKTIFVTE--HENNAVWKFEWQ 298 (314)
T ss_dssp EEEEBTTCCEEEEEE------TTTEEEEECTTCBSCSEEEECSS---SCEEEEEECTTSSEEEEEE--TTTTEEEEEECS
T ss_pred ceEECCCCCEEEEEc------CCCEEEEEcCCCCcEeEEEeCCC---CCceeEEECCCCCEEEEEe--CCCCeEEEEeCC
Confidence 467889999888865 24578889887 76666676663 3588899999999766553 333467666543
No 429
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=39.69 E-value=3.7e+02 Score=28.55 Aligned_cols=75 Identities=8% Similarity=-0.154 Sum_probs=46.7
Q ss_pred ceeeccCCCeEEEEeeccC------------------CCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeE
Q 001314 4 VLEWMPSGANIAAVYDRKS------------------ENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLL 64 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~------------------~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iL 64 (1102)
.++..|.|+++++...... ......|..|... |-....|.-. .-....++++++|+.++
T Consensus 28 ~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~p~gia~d~~g~l~ 105 (329)
T 3fvz_A 28 GVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKN--LFYLPHGLSIDTDGNYW 105 (329)
T ss_dssp EEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTT--TCSSEEEEEECTTSCEE
T ss_pred EEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCC--ccCCceEEEECCCCCEE
Confidence 4788899999887652100 0001368889884 6654443311 11257889999999955
Q ss_pred EEEEeeCCCCeEEEEEccc
Q 001314 65 AAVVRFEEYDSVKICFFSN 83 (1102)
Q Consensus 65 Av~~~~~~~~~vqLWt~~N 83 (1102)
+. ....++|+.|+...
T Consensus 106 v~---d~~~~~v~~~~~~g 121 (329)
T 3fvz_A 106 VT---DVALHQVFKLDPHS 121 (329)
T ss_dssp EE---ETTTTEEEEECTTC
T ss_pred EE---ECCCCEEEEEeCCC
Confidence 43 24457899998754
No 430
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=39.39 E-value=54 Score=28.93 Aligned_cols=22 Identities=9% Similarity=0.078 Sum_probs=10.0
Q ss_pred HHHHHHHhcccChHHHHHHHHH
Q 001314 771 EAWADHLSDVKCFEDAATTYFC 792 (1102)
Q Consensus 771 ~~yAd~L~~~~~~eeAa~~Y~~ 792 (1102)
..+|..+...++|++|..+|.+
T Consensus 23 ~~lg~~~~~~g~~~~A~~~~~~ 44 (115)
T 2kat_A 23 FTLGKTYAEHEQFDAALPHLRA 44 (115)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHH
Confidence 3344444444444444444443
No 431
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=39.18 E-value=4e+02 Score=30.56 Aligned_cols=88 Identities=11% Similarity=0.045 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHHhcccChHHHHHHHHHc-----CC---------HHHHHHHHHHcCCHHHHHHHHhhcC------CChH
Q 001314 765 KMEQVLEAWADHLSDVKCFEDAATTYFCC-----SS---------LEKAMKAYRASGNWSGVLTVAGLLK------LGKD 824 (1102)
Q Consensus 765 ~~~~i~~~yAd~L~~~~~~eeAa~~Y~~a-----g~---------~ekAl~~y~~ag~W~~al~lA~~l~------~~~~ 824 (1102)
++..+....|..+++.|+|.+|+.+.... |. +-.-++.|...++|.+|-.+..+.. ...+
T Consensus 135 erarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~~ 214 (445)
T 4b4t_P 135 ERARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKYE 214 (445)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCCH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCcH
Confidence 45677888899999999999998777653 21 1223467788889988876655431 1223
Q ss_pred HHH-HHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 825 EVA-KLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 825 el~-~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
+++ ....-++......++|.+|++.|.+
T Consensus 215 ~lk~~~~~~~~~~~~~e~~y~~a~~~y~e 243 (445)
T 4b4t_P 215 SLKLEYYNLLVKISLHKREYLEVAQYLQE 243 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 333 3555666777788999999998866
No 432
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=37.24 E-value=84 Score=31.29 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 766 MEQVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 766 ~~~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
|-.++-.||.+. ..++.++|..+|..|
T Consensus 60 YI~LWIrYA~~~-ei~D~d~aR~vy~~a 86 (161)
T 4h7y_A 60 FARIQVRFAELK-AIQEPDDARDYFQMA 86 (161)
T ss_dssp HHHHHHHHHHHH-HHHCGGGCHHHHHHH
T ss_pred HHHHHHHHHHHH-HhcCHHHHHHHHHHH
Confidence 455666666664 335666666666555
No 433
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=36.44 E-value=6e+02 Score=30.01 Aligned_cols=155 Identities=10% Similarity=0.055 Sum_probs=84.5
Q ss_pred CCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc--cceEE
Q 001314 11 GANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS--NNHWY 87 (1102)
Q Consensus 11 GnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~--NYHWY 87 (1102)
|+++..+.+ ....|.+|+-. |-..+.+.... .+..+..++|+..|.|.. ..+.|.+|+.. +..
T Consensus 166 ~~~~~V~~~-----~~~~V~viD~~t~~v~~~i~~g~----~p~~v~~SpDGr~lyv~~---~dg~V~viD~~~~t~~-- 231 (567)
T 1qks_A 166 ENLFSVTLR-----DAGQIALIDGSTYEIKTVLDTGY----AVHISRLSASGRYLFVIG---RDGKVNMIDLWMKEPT-- 231 (567)
T ss_dssp GGEEEEEET-----TTTEEEEEETTTCCEEEEEECSS----CEEEEEECTTSCEEEEEE---TTSEEEEEETTSSSCC--
T ss_pred CceEEEEeC-----CCCeEEEEECCCCeEEEEEeCCC----CccceEECCCCCEEEEEc---CCCeEEEEECCCCCCc--
Confidence 556666653 35789999865 33445554432 466899999999988764 24589999983 433
Q ss_pred EEEEEEeccCCCceEEecC----CCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCCC-cccc
Q 001314 88 LKYEIRYLRRDGIRFMWHP----TKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPP-PMYL 162 (1102)
Q Consensus 88 LKqei~~~~~~~~~~~W~~----e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPP-PM~~ 162 (1102)
+..+|..+. .+..+.+++ .... +++.. ...+.|.|||+.++.+. .. ||- +|..
T Consensus 232 ~v~~i~~G~-~P~~ia~s~~~~pDGk~-l~v~n----------------~~~~~v~ViD~~t~~~~--~~--i~~~~~~~ 289 (567)
T 1qks_A 232 TVAEIKIGS-EARSIETSKMEGWEDKY-AIAGA----------------YWPPQYVIMDGETLEPK--KI--QSTRGMTY 289 (567)
T ss_dssp EEEEEECCS-EEEEEEECCSTTCTTTE-EEEEE----------------EETTEEEEEETTTCCEE--EE--EECCEECT
T ss_pred EeEEEecCC-CCceeEEccccCCCCCE-EEEEE----------------ccCCeEEEEECCCCcEE--EE--Eecccccc
Confidence 233444321 123355662 3322 33321 13578889998875432 21 221 1111
Q ss_pred c--ccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCCC
Q 001314 163 F--SLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPAP 202 (1102)
Q Consensus 163 ~--~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~~ 202 (1102)
. +..-...+..+.+++.+.. .+..+-..|.+.++...+.
T Consensus 290 ~~~~~~p~~rva~i~~s~~~~~-~vv~~~~~g~v~~vd~~~~ 330 (567)
T 1qks_A 290 DEQEYHPEPRVAAILASHYRPE-FIVNVKETGKILLVDYTDL 330 (567)
T ss_dssp TTCCEESCCCEEEEEECSSSSE-EEEEETTTTEEEEEETTCS
T ss_pred ccccccCCCceEEEEEcCCCCE-EEEEecCCCeEEEEecCCC
Confidence 0 0011124566777665432 2333345578888887543
No 434
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=35.71 E-value=1.8e+02 Score=33.85 Aligned_cols=106 Identities=18% Similarity=0.197 Sum_probs=61.4
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEecC-Cccee------------eeecCCc---cccceeeeeecCCCC---eEE
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERN-GLERS------------SFDINEQ---IDSTVELLKWNCMSD---LLA 65 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhg------------eF~L~~~---~~~~v~~L~Wn~DS~---iLA 65 (1102)
+.=.|+|+++|... .+.|...|-+ |.... -|.+-.. ....|....|.+-|. -|-
T Consensus 71 lvlSpsG~lLAl~g-------~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LV 143 (452)
T 3pbp_A 71 VISSTSGDLLCLFN-------DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIV 143 (452)
T ss_dssp EEECTTSSEEEEEC-------SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEE
T ss_pred EEECCCCCEEEEec-------CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEE
Confidence 55579999999986 4677777777 43222 1333211 134589999998665 465
Q ss_pred EEEeeCCCCeEEEEEcccceE---EEEEE-EEeccC----CCceEEecCCCCceEEEEe--eCCcE
Q 001314 66 AVVRFEEYDSVKICFFSNNHW---YLKYE-IRYLRR----DGIRFMWHPTKPLQLICWT--LDGQI 121 (1102)
Q Consensus 66 v~~~~~~~~~vqLWt~~NYHW---YLKqe-i~~~~~----~~~~~~W~~e~pl~L~i~t--~~g~~ 121 (1102)
|.+ ..+.|.+|..+.-.= -||.. =.|+.. +-.++++.+ .+++|++.+ .+|.+
T Consensus 144 VLt---sD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~-~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 144 VLK---EDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSK-DGLTLYCLNTTEGGDI 205 (452)
T ss_dssp EEE---TTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECT-TSSCEEEEECTTSCEE
T ss_pred EEe---cCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcC-CCcEEEEEecCCCCCE
Confidence 655 245799999987110 01110 012221 113577777 578888855 44544
No 435
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=35.45 E-value=2.5e+02 Score=31.49 Aligned_cols=73 Identities=4% Similarity=-0.024 Sum_probs=46.3
Q ss_pred eeeccCCCeEEEEeeccCCCCCCeEEEEecCCcce-eeee-cCCccccceeeeeecC-CCCeEEEEEeeCCCCeEEEEEc
Q 001314 5 LEWMPSGANIAAVYDRKSENKCPSIVFYERNGLER-SSFD-INEQIDSTVELLKWNC-MSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 5 LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrh-geF~-L~~~~~~~v~~L~Wn~-DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
++|.|.|+.+..+... ..+.|..|.+++-.. ..+. ++.+....+..+++++ ++.++. . +....|..|+.
T Consensus 176 ia~~~~g~~l~~~d~~----~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv--~--d~~~~I~~~d~ 247 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWE----GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF--V--DSNKNFGRFNV 247 (409)
T ss_dssp CEECTTSSEEEEEBSS----TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE--E--CTTCEEEEEET
T ss_pred eeEecCCCcEEEEecC----CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE--E--ECCCcEEEEEC
Confidence 8899999977776532 234899999876432 1220 1111223578899999 566555 2 34568999988
Q ss_pred ccce
Q 001314 82 SNNH 85 (1102)
Q Consensus 82 ~NYH 85 (1102)
.+-.
T Consensus 248 ~~~~ 251 (409)
T 3hrp_A 248 KTQE 251 (409)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 7654
No 436
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=35.24 E-value=20 Score=42.41 Aligned_cols=157 Identities=11% Similarity=0.109 Sum_probs=98.0
Q ss_pred hcHHHHHHHHHHcCCCcHHHHHHHHHHHh-------------------cchHHHHhcc--CCcHhHHHHHHHHHHHHhcc
Q 001314 722 QRFENALKHIVSMGDSYHADCLNLMKKYA-------------------QLFPLGLKLI--TDPAKMEQVLEAWADHLSDV 780 (1102)
Q Consensus 722 kryekAl~hl~~~g~~~~deAie~~~~~~-------------------~Ly~~AL~L~--~d~~~~~~i~~~yAd~L~~~ 780 (1102)
.-|.++.=+|.+-.+ +|.|+.-++.|+ .+|=+|+..| ..|..+.+++.. |..+
T Consensus 305 hLW~ElvfLY~~ydE--~DnA~ltMi~h~~~Aw~h~~Fkdii~KVaN~EiyYKAi~FYL~e~P~lL~DLL~v----L~pr 378 (624)
T 3lvg_A 305 HLWAELVFLYDKYEE--YDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMV----LSPR 378 (624)
T ss_dssp TCHHHHHHHHHHHTC--HHHHHHTTTSCHHHHCCGGGGTTTGGGCSCSHHHHHHHHHHTTSCCTTSHHHHHH----HCTT
T ss_pred hhHHHHHHHHhcchh--HHHHHHHHHhCChhhccHHHHHHHHHHcchHHHHHHHHHHHHHhChHHHHHHHHh----cccc
Confidence 346666666666644 665554444331 2455666666 456555554443 3344
Q ss_pred cChHHHHHHHHHcCCH------------------HHHH-HHHHHcCCHHHHHHHHhhcC-CChHHHHHHHHHHHHHHHHc
Q 001314 781 KCFEDAATTYFCCSSL------------------EKAM-KAYRASGNWSGVLTVAGLLK-LGKDEVAKLAQELCEELQAL 840 (1102)
Q Consensus 781 ~~~eeAa~~Y~~ag~~------------------ekAl-~~y~~ag~W~~al~lA~~l~-~~~~el~~l~~~lA~~L~~~ 840 (1102)
=++.....+|.+.|+. .+|+ +.|+.-.|++.+-.....++ .+ ...||..|++.
T Consensus 379 lDh~RvV~~~~k~~~LpLIkpYL~~Vq~~N~~aVNeAln~L~IEEEDy~~LR~SId~ydNFD-------~i~LA~rLEkH 451 (624)
T 3lvg_A 379 LDHTRAVNYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFD-------NISLAQRLEKH 451 (624)
T ss_dssp CCSTTTHHHHHTTTCGGGGTGGGTSCCCSCCHHHHHHHHHHHHHTTCCHHHHHTTSSCCCSC-------TTHHHHHHHTC
T ss_pred CChHHHHHHHHhcCCchhhHHHHHHHHHhhHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc-------HHHHHHHHhhC
Confidence 4566666777777653 2222 56777777776644433332 12 12356667643
Q ss_pred CCh---HHHHHHHHHhcCCHHHHHHHHHHhcCHHHHHHHHHhcCChhhHHHHHHh
Q 001314 841 GKP---GEAAKIALDYCGDVTNGISLLIDARDWEEALRVAFMHRREDLITKVKHA 892 (1102)
Q Consensus 841 g~~---~eAa~i~l~ylgD~e~AI~~y~~~~~W~eA~rLa~~h~~~dL~etv~~a 892 (1102)
... .=||.+|. .-+..+++|.++.+.+.|.+|+..|.....+++.|++..=
T Consensus 452 eL~eFRrIAA~LYk-kn~rw~qsi~l~KkDklykDAietAa~S~~~elaeeLL~y 505 (624)
T 3lvg_A 452 ELIEFRRIAAYLFK-GNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQW 505 (624)
T ss_dssp SSHHHHHHHHHHHH-TTCHHHHHSSCSSTTCCTTGGGTTTTTCCCTTHHHHHHHH
T ss_pred chHHHHHHHHHHHH-hcccHHHHHHHHHhcccHHHHHHHHHHcCCHHHHHHHHHH
Confidence 322 23788874 4889999999999999999999999999888988874443
No 437
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=34.68 E-value=3.7e+02 Score=27.24 Aligned_cols=68 Identities=13% Similarity=0.084 Sum_probs=46.3
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.+++-|.|++..+.. ....|..|..+|- ...|.++.. ...+..+.+++|+.+... ......|..|+..
T Consensus 24 ~i~~d~~g~l~v~~~------~~~~v~~~~~~~~-~~~~~~~~~-~~~~~~i~~~~~g~l~v~---~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 24 GITSSEDGKVWFTQH------KANKISSLDQSGR-IKEFEVPTP-DAKVMCLIVSSLGDIWFT---ENGANKIGKLSKK 91 (300)
T ss_dssp EEEECTTSCEEEEET------TTTEEEEECTTSC-EEEEECSST-TCCEEEEEECTTSCEEEE---ETTTTEEEEECTT
T ss_pred eeeECCCCCEEEEcC------CCCeEEEECCCCc-eEEEECCCC-CCcceeEEECCCCCEEEE---ecCCCeEEEECCC
Confidence 467778899877764 2468999988843 334666531 236889999999986543 2335678888766
No 438
>3iko_C Nucleoporin NUP84; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.20A {Saccharomyces cerevisiae} PDB: 3jro_C
Probab=33.86 E-value=40 Score=39.40 Aligned_cols=88 Identities=17% Similarity=0.129 Sum_probs=58.1
Q ss_pred hHHHHHHHHHcCCHHHHHHHHHHcCC-HHHHHHHHhhcCC----Ch-----------HHHHHHHHHHHHHHHHcC---Ch
Q 001314 783 FEDAATTYFCCSSLEKAMKAYRASGN-WSGVLTVAGLLKL----GK-----------DEVAKLAQELCEELQALG---KP 843 (1102)
Q Consensus 783 ~eeAa~~Y~~ag~~ekAl~~y~~ag~-W~~al~lA~~l~~----~~-----------~el~~l~~~lA~~L~~~g---~~ 843 (1102)
+-.+.--+.++|.+++|++-..++|+ |+.|.-...++-. +. ...+.+-+.++-.|.+.+ +|
T Consensus 180 l~~~i~~liR~G~~~eA~~lc~~~gq~WRAasL~G~~~~~dP~~~~~~~~e~~~~~Gn~~r~LWkr~c~~lA~~~~~~~y 259 (460)
T 3iko_C 180 FFKYIYELILAGAIDEALEEAKLSDNISICMILCGIQEYLNPVIDTQIANEFNTQQGIKKHSLWRRTVYSLSQQAGLDPY 259 (460)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHTTSBCBCTTTSGGGTTTCSSCBSBTTHHHHHHHHHHHHHCSSSCHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHcCCHHHHHHHcccccccCcccccccccccccccCchhHHHHHHHHHHHHhCCCCCHH
Confidence 33455678999999999999999999 7655433333211 11 013567777777777653 56
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhcCHHHHH
Q 001314 844 GEAAKIALDYCGDVTNGISLLIDARDWEEAL 874 (1102)
Q Consensus 844 ~eAa~i~l~ylgD~e~AI~~y~~~~~W~eA~ 874 (1102)
+.|.--+ .+||.+.+..+.+- .|++.+
T Consensus 260 ERAvY~~--LsG~l~s~~~~~~~--sWeD~L 286 (460)
T 3iko_C 260 ERAIYSY--LSGAIPNQEVLQYS--DWESDL 286 (460)
T ss_dssp HHHHHHH--HHTSCCCHHHHTTC--CHHHHH
T ss_pred HHHHHHH--HhCCchhhcccCCC--CHHHHH
Confidence 6665444 38999988764332 899986
No 439
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=33.83 E-value=1.3e+02 Score=35.09 Aligned_cols=61 Identities=11% Similarity=0.056 Sum_probs=32.7
Q ss_pred HHHHHHHHhhcCC--ChHHHHHHHHHHHHHHHHcCC-hHHHHHHHHHhcCCHHHHHHHHHHhcCHHH
Q 001314 809 WSGVLTVAGLLKL--GKDEVAKLAQELCEELQALGK-PGEAAKIALDYCGDVTNGISLLIDARDWEE 872 (1102)
Q Consensus 809 W~~al~lA~~l~~--~~~el~~l~~~lA~~L~~~g~-~~eAa~i~l~ylgD~e~AI~~y~~~~~W~e 872 (1102)
+++|+.....+.- +.+++ ..+..+|...+-.|+ |.+||+.+ |.|+-++|=.+--+++..++
T Consensus 455 Y~~Ai~~L~k~~~tdd~~~v-~~~~~~ak~yE~aGDyy~~AA~k~--~yG~~eqAe~l~~~A~~~~~ 518 (526)
T 2wb7_A 455 YKAAINDLQKAAQQDDYQMF-LNYLNAAKKHEMAGDYYVNAARKA--LNGDLEQAKIDAEKAKEYSN 518 (526)
T ss_dssp HHHHHHHHHHHTTCCSHHHH-HHHHHHHHHHHHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCHHHH-HHHHHHhhhhhhccHHHHHHHHHH--hcCccHHHHHHHHHHHHHHH
Confidence 4446655555432 22232 345566666665565 45666654 45777766655555544443
No 440
>3re2_A Predicted protein; menin, multiple endocrine neoplasia 1, tumor suppressor, MIX lineage leukemia, unknown function; 1.95A {Nematostella vectensis}
Probab=32.99 E-value=95 Score=34.97 Aligned_cols=83 Identities=16% Similarity=0.300 Sum_probs=48.2
Q ss_pred hhchhHHHhhhcHHHHHHHHHHcCC-----CcHHHHHHHHHHHhcchHHHHhc----cCCcHhHHHHHHHHHHHHhcccC
Q 001314 712 LMRYTIDLRLQRFENALKHIVSMGD-----SYHADCLNLMKKYAQLFPLGLKL----ITDPAKMEQVLEAWADHLSDVKC 782 (1102)
Q Consensus 712 ~rr~~Id~~LkryekAl~hl~~~g~-----~~~deAie~~~~~~~Ly~~AL~L----~~d~~~~~~i~~~yAd~L~~~~~ 782 (1102)
|--|..- ||.||.-|+.+|..+.+ .+ ..++ .+|.+|+.. |.+...|.-.+ .|-
T Consensus 243 WLLyD~G-hL~rYPmALgnLgDLEe~~pt~gr-~~~l-------~L~~~AI~sa~~yY~n~HvYPYty--lgG------- 304 (472)
T 3re2_A 243 WLLYDMG-HIKTYPMAIANLGDLEEISPTPGR-PPAE-------ELFKEAITVAKREYSDHHIYPYTY--LGG------- 304 (472)
T ss_dssp HHHHHTT-TTTTCHHHHHHHHHHHHHSCCTTS-CCHH-------HHHHHHHHHHHHHSTTCCSHHHHH--HHH-------
T ss_pred HHHHhcc-chhhCchhhcchhhHHhcCCCCCC-CCHH-------HHHHHHHHHHHHHhccCCccchhh--hhh-------
Confidence 4445443 89999999999987632 11 1122 344444433 23333343322 122
Q ss_pred hHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChH
Q 001314 783 FEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKD 824 (1102)
Q Consensus 783 ~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~ 824 (1102)
+|-+-+++.+|+++ |-+|-.+++.++++.+
T Consensus 305 ------y~yR~~~~reAl~~------WA~Aa~Vi~~YNY~re 334 (472)
T 3re2_A 305 ------YYYRKKKYYEAIAS------WVDAGYVAGKYNYSKD 334 (472)
T ss_dssp ------HHHHTTCHHHHHHH------HHHHHHHHTTSCCCGG
T ss_pred ------hhhhcchHHHHHHH------HHHHHHHHHHcCCCcc
Confidence 44555777777777 6667888888888754
No 441
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=32.70 E-value=4e+02 Score=29.77 Aligned_cols=50 Identities=16% Similarity=-0.005 Sum_probs=29.3
Q ss_pred HHHHHHHcCCHHHHHHHH----hhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Q 001314 799 AMKAYRASGNWSGVLTVA----GLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALD 852 (1102)
Q Consensus 799 Al~~y~~ag~W~~al~lA----~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ 852 (1102)
.++++...|++.+++..+ ...++.+ .+...+...|...|+..+|-+.|-+
T Consensus 177 ~~~~~l~~g~~~~a~~~l~~~~~~~P~~E----~~~~~lm~al~~~Gr~~~Al~~y~~ 230 (388)
T 2ff4_A 177 KAEAEIACGRASAVIAELEALTFEHPYRE----PLWTQLITAYYLSDRQSDALGAYRR 230 (388)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCH----HHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 344444555555544332 3344443 3666667777788888888887744
No 442
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=32.19 E-value=4.1e+02 Score=26.86 Aligned_cols=68 Identities=10% Similarity=-0.117 Sum_probs=45.9
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.++.-|.|++.++.. ....|..|..+|-.. .|.++.. ...+..|..++|+.+... +...+.|..|+..
T Consensus 187 ~i~~~~~g~l~v~~~------~~~~i~~~~~~g~~~-~~~~~~~-~~~~~~i~~~~~g~l~v~---~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 187 GITKGNDDALWFVEI------IGNKIGRITTSGEIT-EFKIPTP-NARPHAITAGAGIDLWFT---EWGANKIGRLTSN 254 (299)
T ss_dssp EEEECTTSSEEEEET------TTTEEEEECTTCCEE-EEECSST-TCCEEEEEECSTTCEEEE---ETTTTEEEEEETT
T ss_pred eEEECCCCCEEEEcc------CCceEEEECCCCcEE-EEECCCC-CCCceeEEECCCCCEEEe---ccCCceEEEECCC
Confidence 356778888777764 245788898876533 4666532 235889999999985433 3345789999873
No 443
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=31.69 E-value=2.6e+02 Score=32.39 Aligned_cols=27 Identities=4% Similarity=0.092 Sum_probs=17.8
Q ss_pred cchHHHHhccCCcHhHHHHHHHHHHHHhc
Q 001314 751 QLFPLGLKLITDPAKMEQVLEAWADHLSD 779 (1102)
Q Consensus 751 ~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~ 779 (1102)
..|++||++- ......++..|..+...
T Consensus 110 ~iy~rAL~~P--~~~~~~lw~~Y~~fE~~ 136 (493)
T 2uy1_A 110 NGYMRALQTP--MGSLSELWKDFENFELE 136 (493)
T ss_dssp HHHHHHHTSC--CTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCh--hhhHHHHHHHHHHHHHH
Confidence 5788888743 33456777888776544
No 444
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=31.42 E-value=84 Score=36.26 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=59.1
Q ss_pred CcHhHHHHHHHHHHHHhcccChHHHHHHHHHcC-CHHHHHHHHHHcCCHHHH-H-HHHhh---------------cCCCh
Q 001314 762 DPAKMEQVLEAWADHLSDVKCFEDAATTYFCCS-SLEKAMKAYRASGNWSGV-L-TVAGL---------------LKLGK 823 (1102)
Q Consensus 762 d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag-~~ekAl~~y~~ag~W~~a-l-~lA~~---------------l~~~~ 823 (1102)
.|+-+.......++.....++|.|||..+..+- -..+.+..- ..-.|... + .+... ...+.
T Consensus 6 ~pdl~~~wl~~La~~h~~~~n~~EAa~cl~~~aaliae~L~~~-~~~~~~~~~f~~i~p~~~ee~~~~~d~g~~~~~fte 84 (428)
T 2wm9_A 6 TPELRKTWLDSMARIHVKNGDLSEAAMCYVHVTALVAEYLTRK-GVFRQGCTAFRVITPNIDEEASMMEDVGMQDVHFNE 84 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHT-TSSSCCGGGGTTTCGGGGGGC---------CCSSSH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhc-CCCCCCHHHHhhcCCCccchhccccccCCCccccCH
Confidence 455566667777888889999999999987531 111111110 01223211 0 01000 11234
Q ss_pred HHHHHHHHHHHHHHHHcCChHHHHHHHHHhcCCHHHHHHHHHHhcCHHH
Q 001314 824 DEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISLLIDARDWEE 872 (1102)
Q Consensus 824 ~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylgD~e~AI~~y~~~~~W~e 872 (1102)
+.+.+++...++.|.+.+.|+.|..+|.. .+..|-+..+|..
T Consensus 85 ~~l~~ll~~ai~~f~kg~~~E~ai~~~k~-------L~~~ye~~~dy~~ 126 (428)
T 2wm9_A 85 DVLMELLEQCADGLWKAERYELIADIYKL-------IIPIYEKRRDFER 126 (428)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGHHHHHTT-------THHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHH-------HHHHHHHhcCHHH
Confidence 45667888899999999999988887633 3444555555553
No 445
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=31.36 E-value=1.1e+02 Score=27.47 Aligned_cols=41 Identities=10% Similarity=-0.011 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHhcchHHHHhccCCcHhHHHHHHHHHHHHhc
Q 001314 739 HADCLNLMKKYAQLFPLGLKLITDPAKMEQVLEAWADHLSD 779 (1102)
Q Consensus 739 ~deAie~~~~~~~Ly~~AL~L~~d~~~~~~i~~~yAd~L~~ 779 (1102)
+++|+.+++.--.+|-.|++...++.....+-....+|+..
T Consensus 31 y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~R 71 (93)
T 1wfd_A 31 YQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDR 71 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 44444433222144555555556676666677788888733
No 446
>3u84_A Menin; MLL, JUND, ledgf, TPR, transglutaminase-like, transcription, epigenetics, cancer; 2.50A {Homo sapiens} PDB: 3u85_A 3u86_A 3u88_A*
Probab=31.09 E-value=1e+02 Score=35.29 Aligned_cols=84 Identities=20% Similarity=0.335 Sum_probs=47.1
Q ss_pred hhhchhHHHhhhcHHHHHHHHHHcCC-----CcHHHHHHHHHHHhcchHHHHhc----cCCcHhHHHHHHHHHHHHhccc
Q 001314 711 LLMRYTIDLRLQRFENALKHIVSMGD-----SYHADCLNLMKKYAQLFPLGLKL----ITDPAKMEQVLEAWADHLSDVK 781 (1102)
Q Consensus 711 ~~rr~~Id~~LkryekAl~hl~~~g~-----~~~deAie~~~~~~~Ly~~AL~L----~~d~~~~~~i~~~yAd~L~~~~ 781 (1102)
.|.-|..- ||+||.-|+.+|..+.+ .+ ..++ .||.+|+.. |.+...|.-.+ .|-
T Consensus 264 LWlLyd~G-hL~rYPmALgnLgDLEe~~pt~gr-~~~~-------~L~~~AI~sa~~~Y~n~HvYPYtY--lgG------ 326 (550)
T 3u84_A 264 LWLLYDLG-HLERYPMALGNLADLEELEPTPGR-PDPL-------TLYHKGIASAKTYYRDEHIYPYMY--LAG------ 326 (550)
T ss_dssp HHHHHHTT-TTTTCHHHHHHHHHHHHHSCCTTC-CCHH-------HHHHHHHHHHHHHSTTCCSHHHHH--HHH------
T ss_pred HHHHHhcc-chhhCchhhcchhhHhhcCCCCCC-CCHH-------HHHHHHHHHHHHHhccCCccceee--cch------
Confidence 35555543 89999999999988632 01 1122 344444433 23333333221 223
Q ss_pred ChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChH
Q 001314 782 CFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKD 824 (1102)
Q Consensus 782 ~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~ 824 (1102)
+|-+-+++.+|+.+ |-+|-.+++.++++.+
T Consensus 327 -------y~yR~~~~reAl~~------WA~Aa~Vi~~YNY~re 356 (550)
T 3u84_A 327 -------YHCRNRNVREALQA------WADTATVIQDYNYCRE 356 (550)
T ss_dssp -------HHHHTTCHHHHHHH------HHHHHHHHTTSCCCGG
T ss_pred -------hhhhcchHHHHHHH------HHHHHHHHHHcCCCcc
Confidence 44455666666666 5667778888877653
No 447
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=30.88 E-value=5.5e+02 Score=27.87 Aligned_cols=100 Identities=10% Similarity=0.024 Sum_probs=58.8
Q ss_pred CCeEEEEe-cCCcceeeeecCCccccceeeeeecCCCCeEEEEEee-------CCCCeEEEEEcccceEEEEEEEEeccC
Q 001314 26 CPSIVFYE-RNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRF-------EEYDSVKICFFSNNHWYLKYEIRYLRR 97 (1102)
Q Consensus 26 ~~~VvFFE-RNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~-------~~~~~vqLWt~~NYHWYLKqei~~~~~ 97 (1102)
+..|..|+ .+|-..+.+ |. ...- .+++++|+..|.+..+. +..+.|.+|...... ..++|..+..
T Consensus 30 d~~v~v~D~~t~~~~~~i--~~--g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--~~~~i~~~~~ 102 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMV--PT--AFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--FEKEISLPPK 102 (361)
T ss_dssp GCEEEEEETTTCCEEEEE--EC--CEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--EEEEEEECTT
T ss_pred cCeEEEEECCCCeEEEEe--cC--CCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--EEEEEEcCcc
Confidence 34788888 455444443 32 1123 89999999999998642 123579999987654 4667765421
Q ss_pred ------CCceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEe
Q 001314 98 ------DGIRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILV 148 (1102)
Q Consensus 98 ------~~~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~l 148 (1102)
.+..+.++|.... |++. +....+.|.|||-.+-.+
T Consensus 103 ~~~~g~~p~~i~~spdg~~-l~v~---------------n~~~~~~v~v~d~~~~~~ 143 (361)
T 2oiz_A 103 RVQGLNYDGLFRQTTDGKF-IVLQ---------------NASPATSIGIVDVAKGDY 143 (361)
T ss_dssp BCCBCCCGGGEEECTTSSE-EEEE---------------EESSSEEEEEEETTTTEE
T ss_pred ccccCCCcceEEECCCCCE-EEEE---------------CCCCCCeEEEEECCCCcE
Confidence 1123555554332 3331 112357888999765443
No 448
>1smp_I Erwinia chrysanthemi inhibitor; complex (metalloprotease/inhibitor); 2.30A {Erwinia chrysanthemi} SCOP: b.61.2.1
Probab=30.23 E-value=47 Score=30.64 Aligned_cols=38 Identities=18% Similarity=0.388 Sum_probs=31.0
Q ss_pred CCceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecC
Q 001314 2 GAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDIN 45 (1102)
Q Consensus 2 e~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~ 45 (1102)
+.+..|||.+-=|+-++. +...|+||.|.|- +.+=.++
T Consensus 53 ~~p~~W~ptPDGi~L~~~-----dGs~l~ff~r~~~-~y~~~~~ 90 (101)
T 1smp_I 53 EAPVGWRPTPDGLTLTQA-----DGSAVAFFSRNRD-RYEHKLV 90 (101)
T ss_dssp SCCCEEEECSSEEEEECT-----TSCEEEEEEEETT-EEEEECT
T ss_pred CCCcccccCCCEEEEEcC-----CCCEEEEecccCC-cceeecC
Confidence 346789999998999873 4679999999999 7776665
No 449
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=30.18 E-value=1.6e+02 Score=34.00 Aligned_cols=32 Identities=25% Similarity=0.119 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhCChhh
Q 001314 1036 DTARKLQDTGETFQLSQMAAIKLAEDTMSIDI 1067 (1102)
Q Consensus 1036 e~A~~lQ~~~~~~~~~~~~a~~~~~~~~~~~~ 1067 (1102)
+...+|...+.+++..|..|+.+=...++++.
T Consensus 378 ~~v~~Lk~~~~~~~~~l~~~L~lh~~li~~~~ 409 (436)
T 2yin_A 378 DKLTHLKDLIAWQIPFLGAGIKIHEKRVSDNL 409 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 44678999999999999999998887777644
No 450
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=28.30 E-value=56 Score=40.61 Aligned_cols=54 Identities=11% Similarity=0.021 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhcccChHHHHHHHHHc--------CCHHHHHHHHHHcCCHHHHHHHHhhcCC
Q 001314 768 QVLEAWADHLSDVKCFEDAATTYFCC--------SSLEKAMKAYRASGNWSGVLTVAGLLKL 821 (1102)
Q Consensus 768 ~i~~~yAd~L~~~~~~eeAa~~Y~~a--------g~~ekAl~~y~~ag~W~~al~lA~~l~~ 821 (1102)
.++...|+||.++++|+-|..+=.+| .-+.+..+||+..|+|+.|+-....+++
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNScPm 399 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSMPR 399 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcCCC
Confidence 46667888888888888888887777 2356888999999999999877777765
No 451
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=28.08 E-value=4.8e+02 Score=26.33 Aligned_cols=67 Identities=10% Similarity=-0.018 Sum_probs=45.2
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFF 81 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~ 81 (1102)
.+++-|.|++.++.. ....|..|..+|- ...|.+|. ....+..|..++|+.++..- .....|..|+.
T Consensus 61 ~i~~~~~g~l~v~~~------~~~~i~~~~~~g~-~~~~~~~~-~~~~~~~i~~~~~g~l~v~~---~~~~~i~~~d~ 127 (299)
T 2z2n_A 61 CLTISSDGEVWFTEN------AANKIGRITKKGI-IKEYTLPN-PDSAPYGITEGPNGDIWFTE---MNGNRIGRITD 127 (299)
T ss_dssp EEEECTTSCEEEEET------TTTEEEEECTTSC-EEEEECSS-TTCCEEEEEECTTSCEEEEE---TTTTEEEEECT
T ss_pred eEEECCCCCEEEeCC------CCCeEEEECCCCc-EEEEeCCC-cCCCceeeEECCCCCEEEEe---cCCceEEEECC
Confidence 466778888777754 2457888888764 34566653 23358899999999865532 33567888876
No 452
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=28.07 E-value=1e+03 Score=30.21 Aligned_cols=94 Identities=9% Similarity=0.006 Sum_probs=66.2
Q ss_pred hhcHHHHHHHHHHcCCCcHHHHHHHHHH------HhcchHHHHhcc-------CCcHhH-HHHHHHHHHHHhccc--ChH
Q 001314 721 LQRFENALKHIVSMGDSYHADCLNLMKK------YAQLFPLGLKLI-------TDPAKM-EQVLEAWADHLSDVK--CFE 784 (1102)
Q Consensus 721 LkryekAl~hl~~~g~~~~deAie~~~~------~~~Ly~~AL~L~-------~d~~~~-~~i~~~yAd~L~~~~--~~e 784 (1102)
-+.|..|+..++++. +.|...+++.+ . .-|.+.+.+. -+|+.+ ..+++..-+-+...+ +|-
T Consensus 158 hnae~~AvdLalE~e--rLD~Le~~vd~~~~~~~~-~n~~rvclYlls~v~~lv~p~~fr~~vLr~l~~Iy~k~~~~dy~ 234 (963)
T 4ady_A 158 ASELKLALGIALEGY--RLDIIESALKSKLDQDST-SENVKIINYLLTLAITTVTNSKFRSSILRKSFDFLMNMPNCDYL 234 (963)
T ss_dssp HTCHHHHHHHHHHTT--CHHHHHHHHHHHCCC-CH-HHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSSSCCHH
T ss_pred CCCHHHHHHHHHHHh--hHHHHHHHHHhhcccccc-ccHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHhCCchhHH
Confidence 567999999999994 48888888776 2 3455555432 356554 455554444444444 899
Q ss_pred HHHHHHHHcCCHHHHHHHHHH---cCC----HHHHHHHHh
Q 001314 785 DAATTYFCCSSLEKAMKAYRA---SGN----WSGVLTVAG 817 (1102)
Q Consensus 785 eAa~~Y~~ag~~ekAl~~y~~---ag~----W~~al~lA~ 817 (1102)
+|..+..+.++.+.+.+.+.. +.+ ++-||.+++
T Consensus 235 ~a~~~ai~LnD~~li~~if~~l~~~~d~l~ayQiAFdL~~ 274 (963)
T 4ady_A 235 TLNKVVVNLNDAGLALQLFKKLKEENDEGLSAQIAFDLVS 274 (963)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHhcccHHHHHHHHHHHhc
Confidence 999999999999999999988 555 566666654
No 453
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=27.87 E-value=99 Score=32.96 Aligned_cols=52 Identities=21% Similarity=0.235 Sum_probs=38.7
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEE
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLA 65 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLA 65 (1102)
.++|.|.|++..+.. ....|.-|..+|-....+..+. ...+|++++|+.++.
T Consensus 36 gia~~~~g~lyv~d~------~~~~I~~~d~~g~~~~~~~~~~----~p~gia~~~dG~l~v 87 (306)
T 2p4o_A 36 NLASAPDGTIFVTNH------EVGEIVSITPDGNQQIHATVEG----KVSGLAFTSNGDLVA 87 (306)
T ss_dssp EEEECTTSCEEEEET------TTTEEEEECTTCCEEEEEECSS----EEEEEEECTTSCEEE
T ss_pred eEEECCCCCEEEEeC------CCCeEEEECCCCceEEEEeCCC----CceeEEEcCCCcEEE
Confidence 579999999877753 2467899998886555555443 588899999999543
No 454
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=26.96 E-value=1.5e+02 Score=29.25 Aligned_cols=62 Identities=13% Similarity=0.030 Sum_probs=41.7
Q ss_pred cCCcHhHHHHHHHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHH
Q 001314 760 ITDPAKMEQVLEAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQA 839 (1102)
Q Consensus 760 ~~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~ 839 (1102)
|.++..+-.+|..||++..+ +..+|... . ....+. .+..++...|..|+.
T Consensus 64 YknD~RyLklWl~ya~~~~d------p~~if~~L----------~-----------~~~IG~---~~AlfYe~wA~~lE~ 113 (152)
T 4a1g_A 64 YHNDPRFISYCLKFAEYNSD------LHQFFEFL----------Y-----------NHGIGT---LSSPLYIAWAGHLEA 113 (152)
T ss_dssp GTTCHHHHHHHHHHHTTBSC------HHHHHHHH----------H-----------TTTTTT---TBHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHhcCC------HHHHHHHH----------H-----------HCCCcH---HHHHHHHHHHHHHHH
Confidence 35677788899999987521 22233221 0 112222 245789999999999
Q ss_pred cCChHHHHHHHH
Q 001314 840 LGKPGEAAKIAL 851 (1102)
Q Consensus 840 ~g~~~eAa~i~l 851 (1102)
.|++.+|..||.
T Consensus 114 ~g~~~~A~~Vy~ 125 (152)
T 4a1g_A 114 QGELQHASAVLQ 125 (152)
T ss_dssp TTCHHHHHHHHH
T ss_pred cCCHHHHHHHHH
Confidence 999999999984
No 455
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=26.91 E-value=1.6e+02 Score=36.09 Aligned_cols=78 Identities=10% Similarity=0.014 Sum_probs=42.9
Q ss_pred CceeeccCCCeEEEEeeccCCCCC-CeEEEEecCCcc-eeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEE
Q 001314 3 AVLEWMPSGANIAAVYDRKSENKC-PSIVFYERNGLE-RSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICF 80 (1102)
Q Consensus 3 ~~LsWrPsGnlIA~~qr~~~~~~~-~~VvFFERNGLr-hgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt 80 (1102)
..++|.|.|..|+-+.... . .+ ..|......|-. .......++.+.-.....|++||..|++.........|.++.
T Consensus 224 ~~~~WspDg~~l~y~~~d~-~-~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d 301 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDE-T-LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLD 301 (751)
T ss_dssp SCCEECSSTTEEEEEEECT-T-CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEE
T ss_pred eeEEEecCCCEEEEEEECC-C-CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEE
Confidence 4689999999888775321 1 12 245555544321 111111111112355789999999999987433333455555
Q ss_pred cc
Q 001314 81 FS 82 (1102)
Q Consensus 81 ~~ 82 (1102)
..
T Consensus 302 ~~ 303 (751)
T 2xe4_A 302 LR 303 (751)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 456
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=25.94 E-value=1.2e+02 Score=35.63 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=35.9
Q ss_pred cHHHHHHHHHHcCCCcHHHHHHHHHHHhcchHHHHhcc------CCcHhHHHHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 723 RFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLI------TDPAKMEQVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 723 ryekAl~hl~~~g~~~~deAie~~~~~~~Ly~~AL~L~------~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
+-+.|..+.-++....-++|++|.++.-..|++|++.+ .|++++ ..||.-.++||-|+-+|.+|
T Consensus 425 Ki~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~tdd~~~v-------~~~~~~ak~yE~aGDyy~~A 494 (526)
T 2wb7_A 425 KIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQDDYQMF-------LNYLNAAKKHEMAGDYYVNA 494 (526)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHH-------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhccCCHHHH-------HHHHHHhhhhhhccHHHHHH
Confidence 34555555555411114788888866557788888877 233333 34444444455555555543
No 457
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=25.88 E-value=3.6e+02 Score=31.46 Aligned_cols=141 Identities=20% Similarity=0.247 Sum_probs=0.0
Q ss_pred hhHhHhcCCccHHHHHHHHHHHHhhhccCCCCcCCCChhhHHHHHHHHHhhcchHHHHHHHHhccCHHHHHHHHHHh---
Q 001314 615 LTTLARSDPPALEEALERIKIIRETELLGSDEPRRMSYPSAEEALKHLLWLADSEAVYEAALGLYDLNLAAIVALNS--- 691 (1102)
Q Consensus 615 lTa~v~k~Pp~le~aL~~i~~l~~~e~~~~~~~~~~~~~~ae~alk~l~fLvDvn~Ly~~ALg~YDl~Lal~VAq~s--- 691 (1102)
|-.|+..++-+.+-|+++.. +...+-||+-...- |+..+...|++=|..+|-.|
T Consensus 334 ivpyi~~~l~n~~lA~~lA~--------------R~~LpGAd~L~~~~---------F~~l~~~g~y~~AA~~aA~sP~g 390 (494)
T 1bpo_A 334 IIPYITNVLQNPDLALRMAV--------------RNNLAGAEELFARK---------FNALFAQGNYSEAAKVAANAPKG 390 (494)
T ss_dssp HHHHHHHTTCCHHHHHHHHH--------------HTTCSSCHHHHHHH---------HHHHHHTTCHHHHHHHHHHSGGG
T ss_pred chhhhhhccCCHHHHHHHHH--------------hcCCccHHHHHHHH---------HHHHHHcCCHHHHHHHHHhCccc
Q ss_pred -cCCcchhhHHHHHHhcC-------ChhhhchhHHHhhhcHHHHHHHHHHcCCCcHHHHHHHHHHHhcchHHHHhccCCc
Q 001314 692 -QRDPKEFLPYLQELESM-------PPLLMRYTIDLRLQRFENALKHIVSMGDSYHADCLNLMKKYAQLFPLGLKLITDP 763 (1102)
Q Consensus 692 -qkDPkEYLpfL~~L~~l-------e~~~rr~~Id~~LkryekAl~hl~~~g~~~~deAie~~~~~~~Ly~~AL~L~~d~ 763 (1102)
-+.| .=+++++.+ ++.++-|.+ |.+-|.-...|.+|+++-- |-.+.
T Consensus 391 iLRt~----~Ti~rFk~vp~~pgq~splL~YF~~-------------Ll~~g~Ln~~ESlEl~r~v---------L~q~r 444 (494)
T 1bpo_A 391 ILRTP----DTIRRFQSVPAQPGQTSPLLQYFGI-------------LLDQGQLNKYESLELCRPV---------LQQGR 444 (494)
T ss_dssp SSCSH----HHHHHHTTSCCCTTSCCHHHHHHHH-------------HHHHSCCCHHHHHHHHHHH---------HHTTC
T ss_pred cccCH----HHHHHHhcCCCCCCCCCHHHHHHHH-------------HhccCccchHHhhHHhHHH---------HhccH
Q ss_pred HhHHHHH---------HHHHHHHhcccChHHHHHHHHHcCCHHHHHHHHHH
Q 001314 764 AKMEQVL---------EAWADHLSDVKCFEDAATTYFCCSSLEKAMKAYRA 805 (1102)
Q Consensus 764 ~~~~~i~---------~~yAd~L~~~~~~eeAa~~Y~~ag~~ekAl~~y~~ 805 (1102)
..+-+-| +..||.+ ...+..-|..+|.+|+.+.|++.||.+
T Consensus 445 ~~llekWl~e~KL~~SEeLGDlv-k~~d~~LAl~IY~~a~~~~Kvi~cl~e 494 (494)
T 1bpo_A 445 KQLLEKWLKEDKLECSEELGDLV-KSVDPTLALSVYLRANVPNKVIQCFAE 494 (494)
T ss_dssp HHHHHHHHHHTCSCCCHHHHHHH-HHHCSHHHHHHHHHHCCCCC-------
T ss_pred HHHHHHHHhcCCccccHHhHhhh-hhcCHHHHHHHHHHcCCcHHHHHHhhC
No 458
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=25.78 E-value=6.9e+02 Score=28.27 Aligned_cols=83 Identities=12% Similarity=-0.076 Sum_probs=44.9
Q ss_pred HHHHHHHHHhcccChHHHHHHHHHcCC--------------HHHHHHHHHHcCCHHHHH-------HHHhhcCCChHHHH
Q 001314 769 VLEAWADHLSDVKCFEDAATTYFCCSS--------------LEKAMKAYRASGNWSGVL-------TVAGLLKLGKDEVA 827 (1102)
Q Consensus 769 i~~~yAd~L~~~~~~eeAa~~Y~~ag~--------------~ekAl~~y~~ag~W~~al-------~lA~~l~~~~~el~ 827 (1102)
+-...|+++.+.++|.+|..++.+.-. +---+++|...+++.++- .++.... .+..+.
T Consensus 101 l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~-~~p~i~ 179 (394)
T 3txn_A 101 LEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIY-CPPKVQ 179 (394)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSC-CCHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCC-CCHHHH
Confidence 444666777777777777666554422 112234455555554442 2333321 223344
Q ss_pred HHHHHHHHH-HH-HcCChHHHHHHHHH
Q 001314 828 KLAQELCEE-LQ-ALGKPGEAAKIALD 852 (1102)
Q Consensus 828 ~l~~~lA~~-L~-~~g~~~eAa~i~l~ 852 (1102)
.....++.. .. ..|+|.+|+..|++
T Consensus 180 a~i~~~~Gi~~l~~~rdyk~A~~~F~e 206 (394)
T 3txn_A 180 GALDLQSGILHAADERDFKTAFSYFYE 206 (394)
T ss_dssp HHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHhhHHHHHhccCHHHHHHHHHH
Confidence 444444443 44 58999999998877
No 459
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=25.74 E-value=1.5e+02 Score=31.92 Aligned_cols=75 Identities=9% Similarity=-0.055 Sum_probs=48.6
Q ss_pred ceeeccCCCeEEEEeeccCC----CCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEE
Q 001314 4 VLEWMPSGANIAAVYDRKSE----NKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKI 78 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~----~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqL 78 (1102)
.+..-|.|++.+++...... ++...|..|+.. |-....+.+|. ......|+|++|+..|-+.- . .|..
T Consensus 176 ~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~--g~~p~~la~~~d~~~lyv~~----~-~v~~ 248 (328)
T 3dsm_A 176 SLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKL--GDWPSEVQLNGTRDTLYWIN----N-DIWR 248 (328)
T ss_dssp CCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCT--TCCCEEEEECTTSCEEEEES----S-SEEE
T ss_pred ceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCC--CCCceeEEEecCCCEEEEEc----c-EEEE
Confidence 46667889877776422100 002578888875 44445666652 23578999999999887753 2 6888
Q ss_pred EEcccce
Q 001314 79 CFFSNNH 85 (1102)
Q Consensus 79 Wt~~NYH 85 (1102)
|+..+..
T Consensus 249 ~d~~t~~ 255 (328)
T 3dsm_A 249 MPVEADR 255 (328)
T ss_dssp EETTCSS
T ss_pred EECCCCc
Confidence 8876655
No 460
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=25.71 E-value=97 Score=27.47 Aligned_cols=17 Identities=18% Similarity=0.255 Sum_probs=9.5
Q ss_pred HHHHcCCHHHHHHHHHH
Q 001314 789 TYFCCSSLEKAMKAYRA 805 (1102)
Q Consensus 789 ~Y~~ag~~ekAl~~y~~ 805 (1102)
.|.+.|++++|+..|.+
T Consensus 55 ~~~~~g~~~~A~~~~~~ 71 (104)
T 2v5f_A 55 AVYQQGDLDKALLLTKK 71 (104)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHH
Confidence 44555666666665544
No 461
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=24.45 E-value=1.1e+02 Score=35.09 Aligned_cols=78 Identities=14% Similarity=-0.040 Sum_probs=47.8
Q ss_pred hhHHHhhhcHHHHHHHHHHcC-----CCc-HHHH---HHHHHHHhcchHHHHhcc----------CCcHhHHHHHHHHHH
Q 001314 715 YTIDLRLQRFENALKHIVSMG-----DSY-HADC---LNLMKKYAQLFPLGLKLI----------TDPAKMEQVLEAWAD 775 (1102)
Q Consensus 715 ~~Id~~LkryekAl~hl~~~g-----~~~-~deA---ie~~~~~~~Ly~~AL~L~----------~d~~~~~~i~~~yAd 775 (1102)
+.+..-.|.+++|++.|.++- ..+ .+-. +.+.... +.|..|...+ .|++....+....|-
T Consensus 138 a~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~-~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl 216 (429)
T 4b4t_R 138 GEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFY-NDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGI 216 (429)
T ss_dssp HHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHH
Confidence 344445677888888777641 111 1222 2223344 5666665544 355555566677788
Q ss_pred HHhcccChHHHHHHHHHc
Q 001314 776 HLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 776 ~L~~~~~~eeAa~~Y~~a 793 (1102)
++...++|.+|+..|..+
T Consensus 217 ~~l~~r~f~~Aa~~f~e~ 234 (429)
T 4b4t_R 217 HCLAVRNFKEAAKLLVDS 234 (429)
T ss_dssp GGGGTSCHHHHHHHHHHH
T ss_pred HHHHhChHHHHHHHHHHH
Confidence 999999999999988754
No 462
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=23.39 E-value=3.5e+02 Score=24.92 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=6.8
Q ss_pred hcHHHHHHHHHHc
Q 001314 722 QRFENALKHIVSM 734 (1102)
Q Consensus 722 kryekAl~hl~~~ 734 (1102)
+++++|+.+|.++
T Consensus 9 ~d~~~A~~~~~~a 21 (138)
T 1klx_A 9 KDLKKAIQYYVKA 21 (138)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 3455555555543
No 463
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=23.25 E-value=6e+02 Score=28.59 Aligned_cols=159 Identities=13% Similarity=0.022 Sum_probs=86.2
Q ss_pred cCCCeEEEEeeccCCCCCCeEEEEecC-CcceeeeecCCccccceeeeeecCCCCeEEEEEee-------CCCCeEEEEE
Q 001314 9 PSGANIAAVYDRKSENKCPSIVFYERN-GLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRF-------EEYDSVKICF 80 (1102)
Q Consensus 9 PsGnlIA~~qr~~~~~~~~~VvFFERN-GLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~-------~~~~~vqLWt 80 (1102)
|.|+.+-.+-..... ....|..++-. +-.-+++.... .- .+..++|+..|-|.-.. ...+.|.+|+
T Consensus 42 pd~~~vyV~~~~~~~-~~~~V~ViD~~t~~v~~~I~vG~----~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 42 PDARRVYVNDPAHFA-AVTQQFVIDGEAGRVIGMIDGGF----LP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCTTEEEEEECGGGC-SSEEEEEEETTTTEEEEEEEECS----SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEEcCcccC-CCCEEEEEECCCCeEEEEEECCC----CC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 678766655421000 12467777743 44455554432 12 49999999999886421 1246799999
Q ss_pred cccceEEEEEEEEeccCCCceEEecCCCCceEEEEeeCCcEEEEEEEEeeeecCCcEEEEEeCCeEEeccCCCCCCCCcc
Q 001314 81 FSNNHWYLKYEIRYLRRDGIRFMWHPTKPLQLICWTLDGQITTYNFIWTTAVMENSTALVIDGSKILVTPLSLSLMPPPM 160 (1102)
Q Consensus 81 ~~NYHWYLKqei~~~~~~~~~~~W~~e~pl~L~i~t~~g~~~~~~~~w~~~~~d~~~vaVIDG~~l~lTp~r~a~VPPPM 160 (1102)
..... ...+|..+...... .-..|..+.+ +.+|+.. |..+....+.|.|||-.+..++- -||-|.
T Consensus 116 ~~t~~--v~~~I~v~~g~r~~---~g~~P~~~a~-spDGk~l-----yVan~~~~~~VsVID~~t~~vv~----tI~v~g 180 (386)
T 3sjl_D 116 PVTLL--PTADIELPDAPRFL---VGTYPWMTSL-TPDGKTL-----LFYQFSPAPAVGVVDLEGKAFKR----MLDVPD 180 (386)
T ss_dssp TTTCC--EEEEEEETTCCCCC---BSCCGGGEEE-CTTSSEE-----EEEECSSSCEEEEEETTTTEEEE----EEECCS
T ss_pred CCCCe--EEEEEECCCccccc---cCCCCceEEE-cCCCCEE-----EEEEcCCCCeEEEEECCCCcEEE----EEECCC
Confidence 98876 45667665311000 0012333444 4455432 33333346789999988777652 234444
Q ss_pred cccccccCCceeEEEEecCCCCceEEEEEeCCceEEEecCC
Q 001314 161 YLFSLKFPTAVTEMAFYSKSSKNCLAAILSDGCLCVVDLPA 201 (1102)
Q Consensus 161 ~~~~l~~~~~i~~vaf~~~~~~~~~a~vl~~~~l~l~~~~~ 201 (1102)
|. ..+ +.+. ..+.++..||++.++.+..
T Consensus 181 ~~-----------~~~-P~g~-~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 181 CY-----------HIF-PTAP-DTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EE-----------EEE-EEET-TEEEEEETTSCEEEEECCS
T ss_pred cc-----------eee-cCCC-ceeEEECCCCCEEEEECCC
Confidence 31 111 2221 2345667778777777654
No 464
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=23.02 E-value=18 Score=42.77 Aligned_cols=86 Identities=17% Similarity=0.120 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHcCChHHHHHHHHHhcCCHHHHHHH
Q 001314 784 EDAATTYFCCSSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQALGKPGEAAKIALDYCGDVTNGISL 863 (1102)
Q Consensus 784 eeAa~~Y~~ag~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~~g~~~eAa~i~l~ylgD~e~AI~~ 863 (1102)
+-|+.+|.+.+.|+++++...+-+.|++|+..|..-+.. ++++++-+.|.+.|..+-=+.++.. |-|
T Consensus 458 rIAA~LYkkn~rw~qsi~l~KkDklykDAietAa~S~~~-----elaeeLL~yFv~~g~~EcF~a~Lyt-CYd------- 524 (624)
T 3lvg_A 458 RIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDT-----ELAEELLQWFLQEEKRECFGACLFT-CYD------- 524 (624)
T ss_dssp HHHHHHHHTTCHHHHHSSCSSTTCCTTGGGTTTTTCCCT-----THHHHHHHHHHHHCSTHHHHHHHHH-TSS-------
T ss_pred HHHHHHHHhcccHHHHHHHHHhcccHHHHHHHHHHcCCH-----HHHHHHHHHHHHcCchHHHHHHHHH-Hhh-------
Confidence 347778999999999999999999999999988765322 6899999999998887643333323 332
Q ss_pred HHHhcCHHHHHHHHHhcCChhh
Q 001314 864 LIDARDWEEALRVAFMHRREDL 885 (1102)
Q Consensus 864 y~~~~~W~eA~rLa~~h~~~dL 885 (1102)
.=.-+-++.+|=+|+..|+
T Consensus 525 ---LlrpDvVlElaW~~~l~D~ 543 (624)
T 3lvg_A 525 ---LLRPDVVLETAWRHNIMDF 543 (624)
T ss_dssp ---SSSCHHHHHHHHHSCSSSC
T ss_pred ---ccChHHHHHHHHHhccccc
Confidence 1223455666666665443
No 465
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=22.88 E-value=5.9e+02 Score=25.61 Aligned_cols=68 Identities=12% Similarity=-0.056 Sum_probs=46.1
Q ss_pred ceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecCCccccceeeeeecCCCCeEEEEEeeCCCCeEEEEEcc
Q 001314 4 VLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDINEQIDSTVELLKWNCMSDLLAAVVRFEEYDSVKICFFS 82 (1102)
Q Consensus 4 ~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~~~~~~~v~~L~Wn~DS~iLAv~~~~~~~~~vqLWt~~ 82 (1102)
.+++-|.|++..+.. ....|..|..+|-. ..|.+|.. ...+..++.++++.+... ......|..|+..
T Consensus 66 ~i~~~~~g~l~v~~~------~~~~v~~~d~~g~~-~~~~~~~~-~~~~~~i~~~~~g~l~v~---~~~~~~i~~~~~~ 133 (300)
T 2qc5_A 66 CLIVSSLGDIWFTEN------GANKIGKLSKKGGF-TEYPLPQP-DSGPYGITEGLNGDIWFT---QLNGDRIGKLTAD 133 (300)
T ss_dssp EEEECTTSCEEEEET------TTTEEEEECTTSCE-EEEECSST-TCCEEEEEECSTTCEEEE---ETTTTEEEEECTT
T ss_pred eEEECCCCCEEEEec------CCCeEEEECCCCCe-EEecCCCC-CCCCccceECCCCCEEEE---ccCCCeEEEECCC
Confidence 466778888777653 24579999888654 45666632 246889999999986543 2335578888765
No 466
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=22.76 E-value=7.4e+02 Score=27.81 Aligned_cols=69 Identities=6% Similarity=-0.191 Sum_probs=38.1
Q ss_pred hhcHHHHHHHHHHc---CCC--cHHHHHHHHHHHhc-----chHHHHhcc--CCcHhHHHHHHHHHHHHhc----ccChH
Q 001314 721 LQRFENALKHIVSM---GDS--YHADCLNLMKKYAQ-----LFPLGLKLI--TDPAKMEQVLEAWADHLSD----VKCFE 784 (1102)
Q Consensus 721 LkryekAl~hl~~~---g~~--~~deAie~~~~~~~-----Ly~~AL~L~--~d~~~~~~i~~~yAd~L~~----~~~~e 784 (1102)
.+++++|+.+|.++ |.. .+..+.-|. . + .+++|+++| .- ......+...|..+.. .++++
T Consensus 264 ~~d~~~A~~~~~~Aa~~g~~~A~~~Lg~~y~--~-G~g~~~d~~~A~~~~~~Aa-~g~~~A~~~Lg~~y~~G~g~~~d~~ 339 (452)
T 3e4b_A 264 LGDVEQMMKYLDNGRAADQPRAELLLGKLYY--E-GKWVPADAKAAEAHFEKAV-GREVAADYYLGQIYRRGYLGKVYPQ 339 (452)
T ss_dssp GCCHHHHHHHHHHHHHTTCHHHHHHHHHHHH--H-CSSSCCCHHHHHHHHHTTT-TTCHHHHHHHHHHHHTTTTSSCCHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH--c-CCCCCCCHHHHHHHHHHHh-CCCHHHHHHHHHHHHCCCCCCcCHH
Confidence 67788888888765 220 011222122 2 3 777787777 12 2233445555655554 44777
Q ss_pred HHHHHHHHc
Q 001314 785 DAATTYFCC 793 (1102)
Q Consensus 785 eAa~~Y~~a 793 (1102)
+|...|.++
T Consensus 340 ~A~~~~~~A 348 (452)
T 3e4b_A 340 KALDHLLTA 348 (452)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777665
No 467
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=22.40 E-value=2.9e+02 Score=31.83 Aligned_cols=23 Identities=22% Similarity=0.313 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhcCHHHHHHHHHh
Q 001314 857 VTNGISLLIDARDWEEALRVAFM 879 (1102)
Q Consensus 857 ~e~AI~~y~~~~~W~eA~rLa~~ 879 (1102)
+.+||++|-+|+.|+.|+.++..
T Consensus 95 ~~~~i~~f~kg~~~E~ai~l~k~ 117 (436)
T 2yin_A 95 YETIIGYFDKGKMWEEAISLCKE 117 (436)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHH
Confidence 56899999999999999987653
No 468
>1jiw_I Proteinase inhibitor; pseudomonas aeruginosa alkaline protease inhibitor, hydrolase/hyrolase inhibitor complex; 1.74A {Pseudomonas aeruginosa} SCOP: b.61.2.1 PDB: 2rn4_A
Probab=22.40 E-value=57 Score=30.33 Aligned_cols=39 Identities=18% Similarity=0.260 Sum_probs=30.7
Q ss_pred CCceeeccCCCeEEEEeeccCCCCCCeEEEEecCCcceeeeecC
Q 001314 2 GAVLEWMPSGANIAAVYDRKSENKCPSIVFYERNGLERSSFDIN 45 (1102)
Q Consensus 2 e~~LsWrPsGnlIA~~qr~~~~~~~~~VvFFERNGLrhgeF~L~ 45 (1102)
+.+..|+|.+-=|+-++. +...|+||.|.|--+.+=.++
T Consensus 56 ~~p~~W~ptPdGi~L~~~-----dGs~l~ff~r~~~g~y~~~~~ 94 (106)
T 1jiw_I 56 SEPRAWRPTPAGIALLER-----GGLTLMLLGRQGEGDYRVQKG 94 (106)
T ss_dssp SCCCEEEEETTEEEEECT-----TSCEEEEEEEEETTEEEEECS
T ss_pred CCCcccccCCCeEEEEcC-----CCCEEEeeeecCCCcceeEcC
Confidence 356789999888999873 468999999999866665554
No 469
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=22.17 E-value=5.4e+02 Score=27.82 Aligned_cols=16 Identities=0% Similarity=0.057 Sum_probs=12.0
Q ss_pred CccHHHHHHHHHHHHh
Q 001314 623 PPALEEALERIKIIRE 638 (1102)
Q Consensus 623 Pp~le~aL~~i~~l~~ 638 (1102)
++++.++...+..++.
T Consensus 29 ~~~y~~~~~~~~a~~~ 44 (306)
T 3dra_A 29 DEDYKQIMGLLLALMK 44 (306)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 5578888888887764
No 470
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=22.05 E-value=1.5e+02 Score=34.03 Aligned_cols=31 Identities=16% Similarity=0.141 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCChhh
Q 001314 1037 TARKLQDTGETFQLSQMAAIKLAEDTMSIDI 1067 (1102)
Q Consensus 1037 ~A~~lQ~~~~~~~~~~~~a~~~~~~~~~~~~ 1067 (1102)
...+|...+.+++..|..|+.+=...++++.
T Consensus 371 ~v~~Lk~~~~~~~~~~~~~L~lh~~~~~~~~ 401 (428)
T 2wm9_A 371 KVKLLKEVFRQFVEACGQALAVNERLIKEDQ 401 (428)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHCCSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCChhH
Confidence 3678999999999999999998887776543
No 471
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=21.56 E-value=3.3e+02 Score=31.56 Aligned_cols=39 Identities=15% Similarity=-0.000 Sum_probs=31.3
Q ss_pred cchHHHHhcc-CCcHhHHHHHHHHHHHHhcccChHHHHHHHHHc
Q 001314 751 QLFPLGLKLI-TDPAKMEQVLEAWADHLSDVKCFEDAATTYFCC 793 (1102)
Q Consensus 751 ~Ly~~AL~L~-~d~~~~~~i~~~yAd~L~~~~~~eeAa~~Y~~a 793 (1102)
.+|++|+... .. ..++..||.|+...++.++|..+|++|
T Consensus 200 ~~ye~al~~~p~~----~~lW~~ya~~~~~~~~~~~ar~i~erA 239 (493)
T 2uy1_A 200 FIHNYILDSFYYA----EEVYFFYSEYLIGIGQKEKAKKVVERG 239 (493)
T ss_dssp HHHHHHHHHTTTC----HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCC----HHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4788888766 33 578889999999999999998888764
No 472
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=21.20 E-value=1.3e+02 Score=26.30 Aligned_cols=63 Identities=16% Similarity=0.115 Sum_probs=0.0
Q ss_pred HHHHhcccChHHHHHHHHHc------CCHHHHHHHHHHcCCHHHHHHHHhhcCCChHHHHHHHHHHHHHHHH
Q 001314 774 ADHLSDVKCFEDAATTYFCC------SSLEKAMKAYRASGNWSGVLTVAGLLKLGKDEVAKLAQELCEELQA 839 (1102)
Q Consensus 774 Ad~L~~~~~~eeAa~~Y~~a------g~~ekAl~~y~~ag~W~~al~lA~~l~~~~~el~~l~~~lA~~L~~ 839 (1102)
|+|..+..-.+.|..+..+| |+|++|+.+|..+- +.+-.+.+...++.....+-..+.++|..
T Consensus 1 ~~~m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~ai---e~l~~a~k~e~~~~~k~~l~~k~~eYl~R 69 (85)
T 2v6x_A 1 GSHMSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGL---DYLMLALKYEKNPKSKDLIRAKFTEYLNR 69 (85)
T ss_dssp -CCCCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH---HHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH---HHHHHHHHhCCCHHHHHHHHHHHHHHHHH
No 473
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=20.98 E-value=2.3e+02 Score=31.37 Aligned_cols=22 Identities=23% Similarity=0.096 Sum_probs=10.6
Q ss_pred HHHHHHHHHcCCHHHHHHHHhh
Q 001314 797 EKAMKAYRASGNWSGVLTVAGL 818 (1102)
Q Consensus 797 ekAl~~y~~ag~W~~al~lA~~ 818 (1102)
..|+....+++++.-|...|++
T Consensus 211 r~AM~~a~K~KNy~tAa~fArr 232 (325)
T 3mv2_A 211 QVAMSQHFKHKNFLQASYFAGE 232 (325)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhhhHHHHHHHHHH
Confidence 3444444555555544444444
Done!