Query 001317
Match_columns 1102
No_of_seqs 333 out of 899
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 21:56:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ul4_A SPL4, squamosa promoter 100.0 4.5E-39 1.5E-43 296.8 -1.0 90 164-253 2-91 (94)
2 1ul5_A SPL7, squamosa promoter 100.0 4.3E-37 1.5E-41 280.9 -2.8 83 169-251 2-84 (88)
3 1wj0_A Squamosa promoter-bindi 99.9 1.2E-28 4.1E-33 211.4 1.3 59 169-227 2-60 (60)
4 4gpm_A Engineered protein OR26 99.9 4.1E-22 1.4E-26 198.3 14.4 125 847-1000 38-162 (169)
5 4gpm_A Engineered protein OR26 99.9 2.1E-21 7.2E-26 193.2 14.9 136 846-1010 4-143 (169)
6 2jab_A H10-2-G3; HER2, darpin, 99.8 9E-21 3.1E-25 178.0 14.6 123 845-996 13-135 (136)
7 1d9s_A Cyclin-dependent kinase 99.8 2.8E-21 9.5E-26 181.5 10.3 124 846-999 12-136 (136)
8 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.9E-20 1E-24 168.2 13.9 124 847-999 3-126 (126)
9 1awc_B Protein (GA binding pro 99.8 2.5E-20 8.7E-25 177.5 14.0 125 846-1000 2-126 (153)
10 3v30_A DNA-binding protein rfx 99.8 4.4E-20 1.5E-24 178.2 13.6 125 847-1000 37-161 (172)
11 2rfm_A Putative ankyrin repeat 99.8 5.1E-20 1.8E-24 181.2 13.6 125 847-1000 36-160 (192)
12 3twr_A Tankyrase-2; ankyrin re 99.8 6.6E-20 2.3E-24 175.8 13.8 136 847-1010 9-148 (165)
13 3f6q_A Integrin-linked protein 99.8 6.4E-20 2.2E-24 179.0 13.8 138 846-1011 5-146 (179)
14 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.5E-20 1.5E-24 175.7 12.2 123 847-999 39-162 (162)
15 4b93_B Ankyrin repeat domain-c 99.8 6E-20 2E-24 194.1 14.3 136 847-1011 87-226 (269)
16 1oy3_D Transcription factor in 99.8 8.7E-20 3E-24 186.8 14.3 110 888-1016 157-271 (282)
17 1bi7_B P16INK4A, MTS1, multipl 99.8 1.4E-20 4.8E-25 180.6 7.8 125 846-1000 12-137 (156)
18 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.3E-19 4.6E-24 175.6 14.7 126 846-1000 14-139 (169)
19 3v30_A DNA-binding protein rfx 99.8 7.9E-20 2.7E-24 176.5 12.7 134 848-1009 4-141 (172)
20 3v31_A Ankyrin repeat family A 99.8 1.3E-19 4.4E-24 174.2 14.1 125 847-1000 37-161 (167)
21 1awc_B Protein (GA binding pro 99.8 1E-19 3.6E-24 173.2 13.3 118 847-993 35-152 (153)
22 1ihb_A P18-INK4C(INK6), cyclin 99.8 7.2E-20 2.4E-24 174.3 11.7 125 845-999 4-128 (162)
23 3v31_A Ankyrin repeat family A 99.8 8.4E-20 2.9E-24 175.5 12.2 134 847-1009 4-141 (167)
24 2rfm_A Putative ankyrin repeat 99.8 1.4E-19 4.9E-24 178.0 13.6 123 846-997 68-190 (192)
25 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.2E-19 4.1E-24 172.1 12.5 122 846-996 2-123 (156)
26 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.2E-19 4E-24 160.3 11.4 92 889-999 2-93 (93)
27 3jxi_A Vanilloid receptor-rela 99.8 6.6E-20 2.3E-24 187.8 11.2 133 846-1000 93-251 (260)
28 2y1l_E Darpin-8.4; hydrolase-i 99.8 2.3E-19 7.9E-24 173.9 14.4 121 847-996 48-168 (169)
29 3twr_A Tankyrase-2; ankyrin re 99.8 7.9E-20 2.7E-24 175.3 10.9 122 847-998 43-164 (165)
30 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.1E-19 7.2E-24 170.4 13.7 121 846-997 36-156 (156)
31 3jxi_A Vanilloid receptor-rela 99.8 2.3E-19 8E-24 183.7 14.4 131 847-1000 47-211 (260)
32 2etb_A Transient receptor pote 99.8 3.2E-19 1.1E-23 182.7 15.2 136 847-1000 44-207 (256)
33 2rfa_A Transient receptor pote 99.8 5.5E-19 1.9E-23 177.6 16.7 131 846-1000 75-223 (232)
34 2etb_A Transient receptor pote 99.8 1.1E-19 3.6E-24 186.3 11.2 133 846-1000 90-247 (256)
35 2dzn_A Probable 26S proteasome 99.8 4.3E-19 1.5E-23 177.1 14.9 139 847-1011 73-216 (228)
36 4hbd_A KN motif and ankyrin re 99.8 3.3E-19 1.1E-23 187.9 14.8 133 847-998 112-274 (276)
37 1k1a_A B-cell lymphoma 3-encod 99.8 4E-19 1.4E-23 178.3 14.1 141 847-1012 80-225 (241)
38 1dcq_A PYK2-associated protein 99.8 3.7E-19 1.3E-23 189.5 14.3 143 844-1009 128-273 (278)
39 2rfa_A Transient receptor pote 99.8 4.9E-19 1.7E-23 177.9 14.3 141 847-999 38-183 (232)
40 3aaa_C Myotrophin, protein V-1 99.8 1.7E-19 5.8E-24 166.2 9.8 115 847-993 8-122 (123)
41 2pnn_A Transient receptor pote 99.8 5.1E-19 1.7E-23 183.2 14.6 134 847-1000 55-219 (273)
42 1s70_B 130 kDa myosin-binding 99.8 6.6E-19 2.3E-23 183.1 15.2 149 847-1012 74-274 (299)
43 2pnn_A Transient receptor pote 99.8 2.1E-19 7.3E-24 186.1 11.5 133 846-1000 101-259 (273)
44 3t8k_A Uncharacterized protein 99.8 1.4E-19 4.8E-24 182.4 9.3 126 847-1000 39-180 (186)
45 3f6q_A Integrin-linked protein 99.8 2E-19 6.8E-24 175.5 10.0 125 847-1000 40-164 (179)
46 3c5r_A BARD-1, BRCA1-associate 99.8 5.7E-20 2E-24 172.0 5.8 123 847-998 11-133 (137)
47 3ljn_A Hypothetical protein; a 99.8 4.7E-19 1.6E-23 190.8 13.2 130 847-1000 139-270 (364)
48 3aji_A 26S proteasome non-ATPa 99.8 8.1E-19 2.8E-23 175.8 14.0 135 847-1010 74-212 (231)
49 3hra_A Ankyrin repeat family p 99.8 7.4E-19 2.5E-23 172.5 13.3 124 847-996 73-200 (201)
50 1yyh_A HN1;, notch 1, ankyrin 99.8 3.5E-19 1.2E-23 183.3 11.2 136 847-1010 91-230 (253)
51 1ikn_D Protein (I-kappa-B-alph 99.8 3.9E-19 1.3E-23 180.0 11.3 131 847-1000 79-210 (236)
52 1oy3_D Transcription factor in 99.8 1.2E-18 4.1E-23 178.4 14.8 134 847-1000 10-184 (282)
53 2f8y_A Notch homolog 1, transl 99.8 1.3E-18 4.4E-23 173.4 14.4 124 848-1000 94-217 (223)
54 2f8y_A Notch homolog 1, transl 99.8 9.1E-19 3.1E-23 174.5 13.0 126 847-1000 59-184 (223)
55 1ycs_B 53BP2, P53BP2; ankyrin 99.8 3.7E-19 1.3E-23 182.7 9.7 127 845-1000 35-165 (239)
56 3ehr_A Osteoclast-stimulating 99.8 2.4E-19 8.4E-24 180.6 8.1 125 847-1000 74-199 (222)
57 2vge_A RELA-associated inhibit 99.8 5E-19 1.7E-23 182.7 10.6 125 847-1000 22-149 (229)
58 3deo_A Signal recognition part 99.8 7.2E-19 2.5E-23 173.3 11.3 110 845-984 43-153 (183)
59 3utm_A Tankyrase-1; tankyrase, 99.8 2.3E-18 7.8E-23 180.8 15.7 149 847-1012 92-322 (351)
60 1yyh_A HN1;, notch 1, ankyrin 99.8 1.4E-18 4.8E-23 178.8 13.7 122 847-997 125-246 (253)
61 3b7b_A Euchromatic histone-lys 99.8 1.7E-18 5.9E-23 174.1 13.6 137 847-1011 78-218 (237)
62 1ycs_B 53BP2, P53BP2; ankyrin 99.8 7.2E-19 2.5E-23 180.6 10.0 134 847-1010 6-144 (239)
63 1ikn_D Protein (I-kappa-B-alph 99.8 1E-18 3.6E-23 176.8 10.8 143 847-1012 46-193 (236)
64 3aji_A 26S proteasome non-ATPa 99.8 2.8E-18 9.5E-23 171.9 13.8 134 847-1009 41-178 (231)
65 4g8k_A 2-5A-dependent ribonucl 99.8 2.8E-18 9.5E-23 183.0 14.4 148 847-1000 126-299 (337)
66 2b0o_E UPLC1; arfgap, structur 99.8 1.8E-18 6.2E-23 186.4 13.0 138 848-1010 153-293 (301)
67 2dzn_A Probable 26S proteasome 99.8 2.2E-18 7.4E-23 172.0 12.6 140 847-1010 37-181 (228)
68 1k1a_A B-cell lymphoma 3-encod 99.8 4E-18 1.4E-22 171.0 14.4 132 847-999 10-141 (241)
69 2xai_A ASB-9, ankyrin repeat a 99.8 1.8E-18 6.1E-23 179.2 12.0 134 847-1011 70-207 (261)
70 3lvq_E ARF-GAP with SH3 domain 99.8 1.9E-18 6.5E-23 197.5 13.2 131 848-1001 134-267 (497)
71 3ui2_A Signal recognition part 99.8 2E-18 6.7E-23 178.9 11.9 125 845-999 44-185 (244)
72 3hra_A Ankyrin repeat family p 99.8 3.4E-18 1.2E-22 167.8 12.7 127 847-1000 40-171 (201)
73 1wdy_A 2-5A-dependent ribonucl 99.8 6.8E-18 2.3E-22 171.7 14.9 126 847-1000 6-131 (285)
74 3ljn_A Hypothetical protein; a 99.8 1.4E-18 4.7E-23 187.3 10.2 151 846-1011 84-252 (364)
75 3kea_A K1L; tropism, ANK repea 99.8 1.7E-18 5.7E-23 183.0 10.6 123 847-1000 32-155 (285)
76 4b93_B Ankyrin repeat domain-c 99.7 5.3E-19 1.8E-23 186.9 6.5 116 847-993 120-235 (269)
77 1n11_A Ankyrin; clathrin, BAND 99.7 2.9E-18 9.8E-23 188.8 11.7 136 847-1011 246-385 (437)
78 4g8k_A 2-5A-dependent ribonucl 99.7 9.8E-18 3.4E-22 178.7 15.4 140 847-996 26-190 (337)
79 1wdy_A 2-5A-dependent ribonucl 99.7 9.7E-18 3.3E-22 170.6 14.3 127 847-1000 149-279 (285)
80 1s70_B 130 kDa myosin-binding 99.7 7.8E-18 2.7E-22 175.0 13.7 105 847-980 41-145 (299)
81 3utm_A Tankyrase-1; tankyrase, 99.7 8E-18 2.7E-22 176.7 13.4 126 847-1000 25-150 (351)
82 2xai_A ASB-9, ankyrin repeat a 99.7 1.2E-17 4E-22 173.1 14.2 72 932-1010 99-173 (261)
83 3d9h_A CDNA FLJ77766, highly s 99.7 8.3E-18 2.8E-22 177.3 12.8 134 847-1011 126-263 (285)
84 2fo1_E LIN-12 protein; beta-ba 99.7 4.7E-18 1.6E-22 186.1 11.2 131 847-1000 236-372 (373)
85 3aaa_C Myotrophin, protein V-1 99.7 1.1E-17 3.7E-22 154.1 11.6 104 888-1010 6-113 (123)
86 3b7b_A Euchromatic histone-lys 99.7 2.5E-17 8.5E-22 165.7 14.9 125 847-999 12-136 (237)
87 3c5r_A BARD-1, BRCA1-associate 99.7 1.1E-17 3.7E-22 156.5 11.2 106 888-1012 9-118 (137)
88 3eu9_A Huntingtin-interacting 99.7 3.2E-17 1.1E-21 163.1 14.9 125 847-999 77-202 (240)
89 1sw6_A Regulatory protein SWI6 99.7 2.5E-18 8.7E-23 185.3 7.5 143 847-1010 132-323 (327)
90 3jue_A Arfgap with coiled-coil 99.7 2.6E-17 8.8E-22 183.8 14.4 126 847-999 200-326 (368)
91 3d9h_A CDNA FLJ77766, highly s 99.7 3.1E-17 1.1E-21 173.0 13.4 134 847-1010 93-229 (285)
92 1n11_A Ankyrin; clathrin, BAND 99.7 2.7E-17 9.1E-22 181.1 13.1 65 927-998 106-170 (437)
93 3t8k_A Uncharacterized protein 99.7 4E-18 1.4E-22 171.8 5.8 136 848-1012 8-163 (186)
94 2l6b_A NR1C; ankyrin, consensu 99.7 2E-17 7E-22 150.3 8.9 94 888-1000 8-101 (115)
95 1d9s_A Cyclin-dependent kinase 99.7 1.2E-17 4.2E-22 156.7 7.6 93 888-1000 11-104 (136)
96 2jab_A H10-2-G3; HER2, darpin, 99.7 3.1E-17 1.1E-21 153.9 10.0 103 888-1009 13-119 (136)
97 4hbd_A KN motif and ankyrin re 99.7 3.7E-17 1.3E-21 172.2 10.9 148 848-1010 78-257 (276)
98 3kea_A K1L; tropism, ANK repea 99.7 2.5E-17 8.5E-22 174.0 8.3 122 848-1000 97-221 (285)
99 2fo1_E LIN-12 protein; beta-ba 99.7 7E-17 2.4E-21 176.8 11.3 132 847-1000 126-264 (373)
100 2zgd_A 3 repeat synthetic anky 99.7 1E-16 3.4E-21 146.6 10.5 87 888-993 23-109 (110)
101 3eu9_A Huntingtin-interacting 99.7 2.5E-16 8.6E-21 156.6 13.7 124 848-1000 11-135 (240)
102 1n0r_A 4ANK, 4 ankyrin repeats 99.7 1.8E-16 6E-21 143.4 10.6 93 888-999 1-93 (126)
103 3ehr_A Osteoclast-stimulating 99.7 1.6E-16 5.4E-21 160.1 11.2 107 888-1012 72-182 (222)
104 2vge_A RELA-associated inhibit 99.7 1.8E-16 6.3E-21 163.5 11.2 104 888-1010 20-128 (229)
105 3deo_A Signal recognition part 99.6 2.3E-16 8E-21 155.4 9.6 105 888-1012 43-152 (183)
106 1bi7_B P16INK4A, MTS1, multipl 99.6 3.8E-16 1.3E-20 149.8 8.2 103 888-1010 11-118 (156)
107 3ui2_A Signal recognition part 99.6 5.3E-16 1.8E-20 160.7 8.7 104 888-1011 44-152 (244)
108 1sw6_A Regulatory protein SWI6 99.6 4.2E-16 1.4E-20 168.1 6.4 124 849-999 100-230 (327)
109 2aja_A Ankyrin repeat family p 99.6 1.8E-16 6.2E-21 177.4 0.6 129 847-999 93-224 (376)
110 2l6b_A NR1C; ankyrin, consensu 99.6 2.3E-15 7.9E-20 136.7 6.0 103 847-978 10-112 (115)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.5 1.8E-14 6.2E-19 127.0 10.3 88 847-957 3-90 (93)
112 2b0o_E UPLC1; arfgap, structur 99.5 3.5E-15 1.2E-19 160.9 5.6 106 847-987 191-299 (301)
113 2aja_A Ankyrin repeat family p 99.5 1.8E-15 6.1E-20 169.3 -0.1 120 847-1000 129-251 (376)
114 3jue_A Arfgap with coiled-coil 99.5 5E-14 1.7E-18 157.4 9.2 105 888-1011 198-309 (368)
115 1dcq_A PYK2-associated protein 99.4 1.7E-13 5.7E-18 146.0 10.1 110 889-1010 130-245 (278)
116 3lvq_E ARF-GAP with SH3 domain 99.4 9.2E-14 3.2E-18 158.9 8.3 105 890-1012 133-249 (497)
117 2zgd_A 3 repeat synthetic anky 99.4 2.1E-12 7.1E-17 117.9 10.4 87 845-954 23-109 (110)
118 2cxk_A Camta1, calmodulin bind 62.6 16 0.00054 33.9 6.7 69 679-761 6-74 (95)
119 1uad_C RSEC5, exocyst complex 48.8 25 0.00086 32.5 5.7 41 677-719 5-46 (99)
No 1
>1ul4_A SPL4, squamosa promoter binding protein-like 4; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=4.5e-39 Score=296.82 Aligned_cols=90 Identities=60% Similarity=1.047 Sum_probs=80.5
Q ss_pred CCCCCCCCCcccCCChhhhhcccccccccccchhhcCCceeeeCCccchhhhhhccCCCCCCccCccchHHHHHhhHHhh
Q 001317 164 SPGTAPYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRR 243 (1102)
Q Consensus 164 ~~~~~~~~~CqV~gC~~dL~~~k~Y~~R~rvCe~H~ka~~v~~~G~~~RFCQQC~rfH~L~eFd~~krSCr~~L~~hn~R 243 (1102)
++|+++.++||||||++||+.+|+||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+|
T Consensus 2 ~~~~~~~~~CqV~GC~~dL~~~k~Y~rR~rvCe~H~ka~~V~~~G~~~RFCQQCsrFH~L~eFD~~kRSCR~rL~~hn~R 81 (94)
T 1ul4_A 2 SSGSSGLRLCQVDRCTADMKEAKLYHRRHKVCEVHAKASSVFLSGLNQRFCQQCSRFHDLQEFDEAKRSCRRRLAGHNER 81 (94)
T ss_dssp ------CCCCSSTTCCCCCTTCCHHHHHTTCCHHHHTCSCEEETTEEEEECTTTSSEEETTTCCSSCCSCSTTTTCCCCC
T ss_pred CCCCCCCCceecCCCCcchhhHHHHHHhhhhhHHHhcCCEEEECChhHHHHHHHhccCCHHHhccccchHHHHHHHHHHH
Confidence 34457889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCCcccc
Q 001317 244 RRKTQPEDIT 253 (1102)
Q Consensus 244 Rrk~~~~~~~ 253 (1102)
|||++++..+
T Consensus 82 RRk~~~~~~~ 91 (94)
T 1ul4_A 82 RRKSSGESGP 91 (94)
T ss_dssp CCSCCCC---
T ss_pred hccCCCCcCC
Confidence 9999999765
No 2
>1ul5_A SPL7, squamosa promoter binding protein-like 7; transcription factor, SBP, flower development, DNA binding protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=100.00 E-value=4.3e-37 Score=280.90 Aligned_cols=83 Identities=43% Similarity=0.919 Sum_probs=78.3
Q ss_pred CCCCcccCCChhhhhcccccccccccchhhcCCceeeeCCccchhhhhhccCCCCCCccCccchHHHHHhhHHhhhccCC
Q 001317 169 PYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQ 248 (1102)
Q Consensus 169 ~~~~CqV~gC~~dL~~~k~Y~~R~rvCe~H~ka~~v~~~G~~~RFCQQC~rfH~L~eFd~~krSCr~~L~~hn~RRrk~~ 248 (1102)
..++||||||++||+.+|+||+||||||.|+||++|+++|+++||||||+|||+|+|||++|||||+||++||+||||+.
T Consensus 2 ~~~~CqV~GC~~dLs~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQC~rFH~L~eFD~~kRSCR~rL~~hn~RRR~~~ 81 (88)
T 1ul5_A 2 SVARCQVPDCEADISELKGYHKRHRVCLRCATASFVVLDGENKRYCQQCGKFHLLPDFDEGKRSCRRKLERHNNRRKRKP 81 (88)
T ss_dssp -CCSCEETTEECCCSSCCSSSGGGTCCHHHHHHSEEEETTEEEEECTTTSSEEEGGGBCSSTTSBSSSCCCSSSCCCCCS
T ss_pred CCCeeecCCCCCChhHhhHHHhhccccHHHcCCCEEEECCEeeHHHHHhccccChhhhccccchHHHHHHHHHHHhccCC
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999988765
Q ss_pred Ccc
Q 001317 249 PED 251 (1102)
Q Consensus 249 ~~~ 251 (1102)
++.
T Consensus 82 ~~~ 84 (88)
T 1ul5_A 82 VDK 84 (88)
T ss_dssp CSS
T ss_pred ccC
Confidence 553
No 3
>1wj0_A Squamosa promoter-binding protein-like 12; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.72.1.1
Probab=99.94 E-value=1.2e-28 Score=211.35 Aligned_cols=59 Identities=75% Similarity=1.229 Sum_probs=57.2
Q ss_pred CCCCcccCCChhhhhcccccccccccchhhcCCceeeeCCccchhhhhhccCCCCCCcc
Q 001317 169 PYPMCQVDNCKEDLSNAKDYHRRHKVCELHSKSTKALVGKQMQRFCQQCSRFHPLSEFD 227 (1102)
Q Consensus 169 ~~~~CqV~gC~~dL~~~k~Y~~R~rvCe~H~ka~~v~~~G~~~RFCQQC~rfH~L~eFd 227 (1102)
+.++||||||++||+.+|+|||||||||.|+||++|+++|.++||||||+|||+|+|||
T Consensus 2 ~~~~CqV~gC~~dl~~~k~Y~rR~rvCe~H~ka~~v~~~G~~~RFCQQCsrFH~L~eFD 60 (60)
T 1wj0_A 2 SAICCQVDNCGADLSKVKDYHRRHKVCEIHSKATTALVGGIMQRFCQQCSRFHVLEEFD 60 (60)
T ss_dssp -CEECSSTTCCCEETSCCSSTTTTTCCHHHHTCSCEEETTEEECCCSSSCSCCBTTSCC
T ss_pred CCceeecCCCCcChhHhHHHhhccccChhHcCCCEEEECCEEEehhhhccCccCcccCC
Confidence 56899999999999999999999999999999999999999999999999999999998
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=4.1e-22 Score=198.28 Aligned_cols=125 Identities=21% Similarity=0.226 Sum_probs=108.6
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++|++|+..++..+++.||+.+ .+++.. +. .|+||||+|+++|+.++|++||++|+ +
T Consensus 38 ~t~l~~a~~~~~~~~~~~ll~~g----ad~~~~-----d~-~g~TpLh~A~~~g~~~~v~~Ll~~ga------------d 95 (169)
T 4gpm_A 38 RTPLHHAAENGHKEVVKLLISKG----ADVNAK-----DS-DGRTPLHHAAENGHKEVVKLLISKGA------------D 95 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHhcc----cchhhh-----cc-CCCCHHHHHHHcCCHHHHHHHHHCcC------------C
Confidence 48999999999999999999854 344433 22 59999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.+|..|+||||+||.. |+.++|++|++. +|+++.+|.+|.||||+|+.+|+.+++++|++++++-
T Consensus 96 vn~~d~~G~TpLh~A~~~-g~~~~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 96 VNAKDSDGRTPLHHAAEN-GHKEVVKLLISK------GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162 (169)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred CCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 899999999999999985 788999999997 5789999999999999999999999999999999876
No 5
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.86 E-value=2.1e-21 Score=193.20 Aligned_cols=136 Identities=21% Similarity=0.248 Sum_probs=117.2
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
+...|+.|+.+|+.++|+.||+.+ ++++.. +. .|+||||+|+..++.+++++||++|+
T Consensus 4 lg~~L~~Aa~~G~~~~v~~Ll~~G----advn~~-----d~-~g~t~l~~a~~~~~~~~~~~ll~~ga------------ 61 (169)
T 4gpm_A 4 LGKRLIEAAENGNKDRVKDLIENG----ADVNAS-----DS-DGRTPLHHAAENGHKEVVKLLISKGA------------ 61 (169)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHhccc------------
Confidence 456789999999999999999964 444533 22 59999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----c
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----R 1001 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~ 1001 (1102)
+++.+|..|+||||+||.. |+.++|++|++. +|++|++|.+|+||||+|+..|+.++|++|+++.++- .
T Consensus 62 d~~~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~------gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~ 134 (169)
T 4gpm_A 62 DVNAKDSDGRTPLHHAAEN-GHKEVVKLLISK------GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDS 134 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred chhhhccCCCCHHHHHHHc-CCHHHHHHHHHC------cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCC
Confidence 5789999999999999985 788999999998 5789999999999999999999999999999997664 2
Q ss_pred CCceeeeeC
Q 001317 1002 NGQVTIPVG 1010 (1102)
Q Consensus 1002 ~~~v~l~i~ 1010 (1102)
+|..+|.+.
T Consensus 135 ~G~TpL~~A 143 (169)
T 4gpm_A 135 DGRTPLDLA 143 (169)
T ss_dssp TSCCHHHHH
T ss_pred CCCCHHHHH
Confidence 455555553
No 6
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=9e-21 Score=178.02 Aligned_cols=123 Identities=17% Similarity=0.206 Sum_probs=109.2
Q ss_pred hhhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 001317 845 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (1102)
Q Consensus 845 RfktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~yl 924 (1102)
.-.++||+|+..|+.++++.|++.+ .+++.. + ..|.||||+|+..|+.++|++||++|+
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~----------- 71 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANG----ADVNAK-----D-EYGLTPLYLATAHGHLEIVEVLLKNGA----------- 71 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----C-TTSCCHHHHHHHHTCHHHHHHHHHTTC-----------
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcC----CCCCCc-----C-CCCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 3469999999999999999999964 344433 2 258999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 001317 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARK 996 (1102)
Q Consensus 925 fdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~K 996 (1102)
++|.+|..|.||||+|+.. ++.+++++|+++ +++++.+|.+|.||||+|+..|+.+++++|+++
T Consensus 72 -~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ 135 (136)
T 2jab_A 72 -DVNAVDAIGFTPLHLAAFI-GHLEIAEVLLKH------GADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135 (136)
T ss_dssp -CTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC
T ss_pred -CCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence 5789999999999999996 778899999997 567999999999999999999999999999875
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.84 E-value=2.8e-21 Score=181.50 Aligned_cols=124 Identities=19% Similarity=0.206 Sum_probs=110.2
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
-.++||+|+.+|+.++++.||+.. .+++.. + ..|+||||+|+. |+.++|++||++|+
T Consensus 12 g~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~-~~g~t~L~~A~~-~~~~~v~~Ll~~g~------------ 68 (136)
T 1d9s_A 12 SDAGLATAAARGQVETVRQLLEAG----ADPNAL-----N-RFGRRPIQVMMM-GSAQVAELLLLHGA------------ 68 (136)
T ss_dssp CSCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----C-TTCCTTTTTSTT-SCHHHHHHHHHHTC------------
T ss_pred CccHHHHHHHcCCHHHHHHHHHcC----CCcCCc-----C-CCCCCHHHHHHc-CCHHHHHHHHHCCC------------
Confidence 458999999999999999999963 344433 2 258999999999 99999999999998
Q ss_pred CCCCCCCC-CChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 926 PPNLAGPG-GITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 926 dpnakd~~-G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
++|.+|.. |.||||+|+.. ++.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus 69 ~~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 69 EPNCADPATLTRPVHDAARE-GFLDTLVVLHRA------GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CSSCCBTTTTBCHHHHHHHH-TCHHHHHHHHHT------CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 57899999 99999999995 788999999997 578999999999999999999999999999998764
No 8
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=2.9e-20 Score=168.19 Aligned_cols=124 Identities=22% Similarity=0.215 Sum_probs=109.6
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.+++++|+++|+ +
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 60 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAG----ADVNAK-----DK-NGRTPLHLAARNGHLEVVKLLLEAGA------------D 60 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred ccHHHHHHHcCcHHHHHHHHHcC----CCCCCc-----CC-CCCcHHHHHHHcCcHHHHHHHHHcCC------------C
Confidence 37999999999999999999964 333322 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
++.+|..|.||||+|+.. +..+++++|++. +++++.+|..|.||||+|+..|+.+++++|++++++
T Consensus 61 ~~~~~~~g~t~l~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 61 VNAKDKNGRTPLHLAARN-GHLEVVKLLLEA------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CcccCCCCCcHHHHHHHc-ChHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 788999999999999985 788999999997 567899999999999999999999999999998764
No 9
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.83 E-value=2.5e-20 Score=177.48 Aligned_cols=125 Identities=16% Similarity=0.130 Sum_probs=105.3
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
+.++|+.|+..|..++++.|++.+.+ .+ ....|.||||+|+..|+.++|++|+++|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~----~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 58 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP----FT-------TDWLGTSPLHLAAQYGHFSTTEVLLRAGV------------ 58 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC----CC-------CCTTCCCHHHHHHHHTCHHHHHHHHTTTC------------
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC----CC-------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 45789999999999999999996432 22 12248899999999999999999999987
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++|.++..|.||||+|+.. ++.+++++|+++ ++++|.+|..|.||||+|+..|+.+++++|+++.++.
T Consensus 59 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 126 (153)
T 1awc_B 59 SRDARTKVDRTPLHMAASE-GHANIVEVLLKH------GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADV 126 (153)
T ss_dssp CTTCCCTTCCCHHHHHHHH-TCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCCCCCHHHHHHHc-ChHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 5788899999999999985 678899999987 5678999999999999999999999999999886653
No 10
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.82 E-value=4.4e-20 Score=178.23 Aligned_cols=125 Identities=18% Similarity=0.126 Sum_probs=111.1
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.||+.++ +++.. +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 94 (172)
T 3v30_A 37 FTPLIWASAFGEIETVRFLLEWGA----DPHIL-----AK-ERESALSLASTGGYTDIVGLLLERDV------------D 94 (172)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTC----CTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHTTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC----Cchhh-----cc-cCCCHHHHHHHCCCHHHHHHHHHcCC------------C
Confidence 489999999999999999999743 33322 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.+|..|.||||+|+.. ++.+++++|++. +++++.+|..|.||||+|+..|+.+++++|++++++.
T Consensus 95 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 95 INIYDWNGGTPLLYAVRG-NHVKCVEALLAR------GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161 (172)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 789999999999999985 788999999997 5789999999999999999999999999999998776
No 11
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.82 E-value=5.1e-20 Score=181.19 Aligned_cols=125 Identities=15% Similarity=0.076 Sum_probs=105.8
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++||+|+..|+.++++.|++...+ ++.. +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 36 ~t~L~~A~~~g~~~~v~~Ll~~~~~----~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 93 (192)
T 2rfm_A 36 RTPLMVACMLGMENAIDKLVENFDK----LEDK-----DI-EGSTALIWAVKNNRLGIAEKLLSKGS------------N 93 (192)
T ss_dssp CCHHHHHHHHTCGGGHHHHHHHHCC----TTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHHTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHhccc----cccc-----cc-cCccHHHHHHHcCCHHHHHHHHHCCC------------C
Confidence 4899999999999999999997533 2322 22 58899999999999999999999988 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++.+|..|.||||+|+.. ++.+++++|+++ ++++|.+|..|.||||+|+..|+.+++++|+++.++.
T Consensus 94 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 160 (192)
T 2rfm_A 94 VNTKDFSGKTPLMWSIIF-GYSEMSYFLLEH------GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI 160 (192)
T ss_dssp TTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CCCCCCCCCcHHHHHHHc-CCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 788899999999999985 677899999987 5678999999999999999999999999999886653
No 12
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.82 E-value=6.6e-20 Score=175.85 Aligned_cols=136 Identities=19% Similarity=0.229 Sum_probs=115.0
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++|+.|+..|..++++.|++. +..+.... +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 9 ~~~l~~A~~~g~~~~v~~ll~~---~~~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 67 (165)
T 3twr_A 9 DRQLLEAAKAGDVETVKKLCTV---QSVNCRDI-----EG-RQSTPLHFAAGYNRVSVVEYLLQHGA------------D 67 (165)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCT---TTTTCCCT-----TT-TCCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred hHHHHHHHHhCCHHHHHHHHHc---CCCCcccc-----cc-CCCCHHHHHHHcChHHHHHHHHhcCC------------C
Confidence 5899999999999999999984 22332322 22 48899999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
+|.+|..|.||||+|+.. ++.+++++|+++ ++++|.+|..|.||||+|+..|+.+++++|+++.++. .+
T Consensus 68 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 140 (165)
T 3twr_A 68 VHAKDKGGLVPLHNACSY-GHYEVAELLVKH------GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRD 140 (165)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCccCCCCCCHHHHHHHc-CcHHHHHHHHhC------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCC
Confidence 789999999999999985 788899999997 5679999999999999999999999999999986654 25
Q ss_pred CceeeeeC
Q 001317 1003 GQVTIPVG 1010 (1102)
Q Consensus 1003 ~~v~l~i~ 1010 (1102)
|+.++++.
T Consensus 141 g~t~l~~a 148 (165)
T 3twr_A 141 GNTPLDLV 148 (165)
T ss_dssp SCCTGGGS
T ss_pred CCChhHhH
Confidence 66666663
No 13
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.82 E-value=6.4e-20 Score=179.00 Aligned_cols=138 Identities=20% Similarity=0.197 Sum_probs=116.1
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
+.++|+.|+..|+.++++.||+. +..+++.. ...|+||||+|+..|+.++|++||++|+
T Consensus 5 ~~~~l~~A~~~g~~~~v~~ll~~---~~~~~~~~------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 63 (179)
T 3f6q_A 5 FMDDIFTQCREGNAVAVRLWLDN---TENDLNQG------DDHGFSPLHWACREGRSAVVEMLIMRGA------------ 63 (179)
T ss_dssp --CCHHHHHHHTCHHHHHHHHHC---TTSCTTCC------CTTSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred HHHHHHHHHHcCCHHHHHHHHhc---Cccccccc------CCCCCCHHHHHHHcCcHHHHHHHHHcCC------------
Confidence 34789999999999999999985 22333322 2258999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----c
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----R 1001 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~ 1001 (1102)
++|.+|..|.||||+|+.. ++.+++++|+++ ++++|.+|..|.||||+|+..|+.+++++|+++.++. .
T Consensus 64 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 136 (179)
T 3f6q_A 64 RINVMNRGDDTPLHLAASH-GHRDIVQKLLQY------KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNK 136 (179)
T ss_dssp CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCT
T ss_pred CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhcc
Confidence 5788999999999999985 788999999998 5689999999999999999999999999999987664 2
Q ss_pred CCceeeeeCc
Q 001317 1002 NGQVTIPVGV 1011 (1102)
Q Consensus 1002 ~~~v~l~i~~ 1011 (1102)
.|..+|++..
T Consensus 137 ~g~tpl~~A~ 146 (179)
T 3f6q_A 137 YGEMPVDKAK 146 (179)
T ss_dssp TSCCGGGGSC
T ss_pred CCCCcHHHHH
Confidence 5666666654
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.82 E-value=4.5e-20 Score=175.67 Aligned_cols=123 Identities=15% Similarity=0.140 Sum_probs=102.2
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++||+|+. |+.++++.|++.+ .+++.. +. .|.||||+|++.|+.++|++||++|+ +
T Consensus 39 ~t~L~~A~~-~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 95 (162)
T 1ihb_A 39 RTALQVMKL-GNPEIARRLLLRG----ANPDLK-----DR-TGFAVIHDAARAGFLDTLQTLLEFQA------------D 95 (162)
T ss_dssp CCHHHHCCS-SCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred ccHHHHHHc-CcHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 489999998 9999999999853 333322 22 58899999999999999999999987 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCC-CcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSW-NSILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~-vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
+|.+|..|.||||+|+.. ++.+++++|++. +++ ++.+|..|.||||+|+.+|+.+++++|++++++
T Consensus 96 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 96 VNIEDNEGNLPLHLAAKE-GHLRVVEFLVKH------TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHH------SCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred CCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 788899999999999984 778899999987 334 689999999999999999999999999988764
No 15
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.82 E-value=6e-20 Score=194.14 Aligned_cols=136 Identities=15% Similarity=0.122 Sum_probs=119.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
++|||+|+.+|+.++|++||+..+ +++.. ...|.||||+|+..++.+++++||++|+ +
T Consensus 87 ~TpLh~A~~~g~~~~v~~Ll~~~a----~~~~~------~~~g~t~l~~a~~~~~~~~~~~Ll~~g~------------~ 144 (269)
T 4b93_B 87 SSPLHVAALHGRADLIPLLLKHGA----NAGAR------NADQAVPLHLACQQGHFQVVKCLLDSNA------------K 144 (269)
T ss_dssp CCHHHHHHHTTCTTHHHHHHHTTC----CTTCC------CTTCCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCC----CcCcc------CCCCCCccccccccChHHHHHHHHHCCC------------C
Confidence 489999999999999999998643 33322 2258999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
+|.+|..|+||||+||.. |+.++|++|++. +|++|++|..|.||||+|+.+|+.++|++|++++++- .+
T Consensus 145 ~n~~d~~g~TpL~~A~~~-g~~~~v~~Ll~~------gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~ 217 (269)
T 4b93_B 145 PNKKDLSGNTPLIYACSG-GHHELVALLLQH------GASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKR 217 (269)
T ss_dssp SCCCCTTCCCHHHHHHHT-TCGGGHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred CCCCCCCCCCHHHHHHHC-CCHHHHHHHHHC------CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 899999999999999985 788899999997 5789999999999999999999999999999997765 36
Q ss_pred CceeeeeCc
Q 001317 1003 GQVTIPVGV 1011 (1102)
Q Consensus 1003 ~~v~l~i~~ 1011 (1102)
|..+|.+..
T Consensus 218 G~TpL~~A~ 226 (269)
T 4b93_B 218 QRTAVDCAE 226 (269)
T ss_dssp SCCSGGGSC
T ss_pred CCCHHHHHH
Confidence 888888864
No 16
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.81 E-value=8.7e-20 Score=186.80 Aligned_cols=110 Identities=24% Similarity=0.202 Sum_probs=82.6
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCC-CChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPG-GITPLHLAACTSDSDDIIDALTNDPQEIGPSSW 966 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~-G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~ 966 (1102)
.|.||||+|+..|+.++|++||++|+ ++|.++.. |.||||+|+.. ++.++|++|+++ +|+
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~------gad 217 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGA------------DLNKPEPTCGRTPLHLAVEA-QAASVLELLLKA------GAD 217 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTC------------CTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHT------TCC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCC------------CCCCCCCCCCcCHHHHHHHc-CCHHHHHHHHHc------CCC
Confidence 48899999999999999999999988 46777754 99999999984 778899999987 568
Q ss_pred CcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeCcccccc
Q 001317 967 NSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVGVEIEQS 1016 (1102)
Q Consensus 967 vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~~~~~~~ 1016 (1102)
+|++|..|.||||+|+.+|+.+++++|++++++. .+|..++.+..+-.+.
T Consensus 218 ~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~~ 271 (282)
T 1oy3_D 218 PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDS 271 (282)
T ss_dssp TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC----------------
T ss_pred CcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCcccc
Confidence 9999999999999999999999999999997776 3688888877664443
No 17
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.81 E-value=1.4e-20 Score=180.57 Aligned_cols=125 Identities=21% Similarity=0.222 Sum_probs=108.4
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
-.++||+|+..|+.++++.||+.+ .+++.. +. .|+||||+|+ .|+.++|++||++|+
T Consensus 12 ~~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~-~~~~~~v~~Ll~~g~------------ 68 (156)
T 1bi7_B 12 SADWLATAAARGRVEEVRALLEAG----ANPNAP-----NS-YGRRPIQVMM-MGSARVAELLLLHGA------------ 68 (156)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTT----CCTTCC-----CS-SSCCTTTSSC-TTCHHHHHHHHTTTC------------
T ss_pred chHHHHHHHHcCCHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHH-cCCHHHHHHHHHcCC------------
Confidence 358999999999999999999853 344433 22 5999999995 999999999999998
Q ss_pred CCCCCCCCCCh-HHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 926 PPNLAGPGGIT-PLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 926 dpnakd~~G~T-PLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++|.+|..|.| |||+|+.. ++.++|++|+++ ++++|.+|..|.||||+|+..|+.+++++|+++.++.
T Consensus 69 ~~~~~d~~g~ttpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~ 137 (156)
T 1bi7_B 69 EPNCADPATLTRPVHDAARE-GFLDTLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGT 137 (156)
T ss_dssp CCCCCCTTTCCCHHHHHHHH-TCHHHHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---
T ss_pred CCCCcCCCCCcHHHHHHHHC-CCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCC
Confidence 57899999999 99999996 788999999997 5789999999999999999999999999999987765
No 18
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.81 E-value=1.3e-19 Score=175.59 Aligned_cols=126 Identities=20% Similarity=0.192 Sum_probs=110.4
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
..++|+.|+..|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++||++|+
T Consensus 14 ~~~~l~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 71 (169)
T 2y1l_E 14 LGKKLLEAARAGRDDEVRILMANG----ADVNAE-----DA-SGWTPLHLAAFNGHLEIVEVLLKNGA------------ 71 (169)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred ccchHHHHHHcCCHHHHHHHHHCC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------
Confidence 358999999999999999999964 344433 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++|.+|..|.||||+|+.. ++.+++++|+++ ++++|.+|.+|.||||+|+..|+.+++++|+++.++-
T Consensus 72 ~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 139 (169)
T 2y1l_E 72 DVNAVDHAGMTPLRLAALF-GHLEIVEVLLKN------GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV 139 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCCccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5788999999999999985 788899999997 5679999999999999999999999999999986653
No 19
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.81 E-value=7.9e-20 Score=176.47 Aligned_cols=134 Identities=18% Similarity=0.132 Sum_probs=112.9
Q ss_pred hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCC
Q 001317 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (1102)
Q Consensus 848 tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdp 927 (1102)
++||+|+..|..++++.||+... ..++.. ...|+||||+|+..|+.++|++||++|+ ++
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~---~~~~~~------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~~ 62 (172)
T 3v30_A 4 LSIHQLAAQGELDQLKEHLRKGD---NLVNKP------DERGFTPLIWASAFGEIETVRFLLEWGA------------DP 62 (172)
T ss_dssp CCHHHHHHTTCHHHHHHHHTTCS---GGGGCC------CTTSCCHHHHHHHTTCHHHHHHHHHHTC------------CT
T ss_pred hhHHHHHHcCCHHHHHHHHHcCc---ccccCC------CCCCCCHHHHHHHcCCHHHHHHHHHcCC------------Cc
Confidence 68999999999999999998532 112222 2258999999999999999999999998 57
Q ss_pred CCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCC
Q 001317 928 NLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNG 1003 (1102)
Q Consensus 928 nakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~ 1003 (1102)
|.++..|.||||+|+.. ++.+++++|++. ++++|.+|..|.||||+|+..|+.+++++|+++.++- ..|
T Consensus 63 ~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g 135 (172)
T 3v30_A 63 HILAKERESALSLASTG-GYTDIVGLLLER------DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSG 135 (172)
T ss_dssp TCCCTTCCCHHHHHHHT-TCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS
T ss_pred hhhcccCCCHHHHHHHC-CCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCC
Confidence 89999999999999985 788999999997 5679999999999999999999999999999986654 234
Q ss_pred ceeeee
Q 001317 1004 QVTIPV 1009 (1102)
Q Consensus 1004 ~v~l~i 1009 (1102)
..+|.+
T Consensus 136 ~t~l~~ 141 (172)
T 3v30_A 136 YTPMDL 141 (172)
T ss_dssp CCHHHH
T ss_pred CCHHHH
Confidence 444444
No 20
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=1.3e-19 Score=174.21 Aligned_cols=125 Identities=18% Similarity=0.130 Sum_probs=109.4
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 94 (167)
T 3v31_A 37 FTPLMWAAAHGQIAVVEFLLQNG----ADPQLL-----GK-GRESALSLACSKGYTDIVKMLLDCGV------------D 94 (167)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TCCCHHHHHHHHTCHHHHHHHHHHTC------------C
T ss_pred CCHHHHHHHCCCHHHHHHHHHcC----CCCCCc-----CC-CCCcHHHHHHHcCCHHHHHHHHHCCC------------C
Confidence 48999999999999999999963 333322 22 58899999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.+|..|.||||+|+.. ++.+++++|+++ +++++.+|.+|.||||+|+..|+.+++++|++++.+.
T Consensus 95 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 95 VNEYDWNGGTPLLYAVHG-NHVKCVKMLLES------GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 788999999999999985 788899999987 5679999999999999999999999999999987765
No 21
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.81 E-value=1e-19 Score=173.22 Aligned_cols=118 Identities=14% Similarity=0.139 Sum_probs=105.2
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++|+++|+ +
T Consensus 35 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 92 (153)
T 1awc_B 35 TSPLHLAAQYGHFSTTEVLLRAG----VSRDAR-----TK-VDRTPLHMAASEGHANIVEVLLKHGA------------D 92 (153)
T ss_dssp CCHHHHHHHHTCHHHHHHHHTTT----CCTTCC-----CT-TCCCHHHHHHHHTCHHHHHHHHTTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHHHcChHHHHHHHHHcCC------------C
Confidence 48999999999999999999853 333432 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHH
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLV 993 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLL 993 (1102)
+|.+|..|.||||+|+.. ++.+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|
T Consensus 93 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 93 VNAKDMLKMTALHWATEH-NHQEVVELLIKY------GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 789999999999999985 788999999998 568999999999999999999999999987
No 22
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.81 E-value=7.2e-20 Score=174.27 Aligned_cols=125 Identities=16% Similarity=0.134 Sum_probs=110.1
Q ss_pred hhhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 001317 845 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (1102)
Q Consensus 845 RfktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~yl 924 (1102)
++.++|++|+.+|..++++.||+.. ++++.. ...|.||||+|+. |+.++|++||++|+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~~----~~~~~~------~~~g~t~L~~A~~-~~~~~v~~Ll~~g~----------- 61 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQNN----VNVNAQ------NGFGRTALQVMKL-GNPEIARRLLLRGA----------- 61 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTSC----CCTTCC------CTTSCCHHHHCCS-SCHHHHHHHHHTTC-----------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhCC----CCcccc------CccCccHHHHHHc-CcHHHHHHHHHcCC-----------
Confidence 4679999999999999999999843 444433 2258999999999 99999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 925 fdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
++|.+|..|.||||+|+.. ++.+++++|+++ ++++|.+|.+|.||||+|+..|+.+++++|+++.++
T Consensus 62 -~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 128 (162)
T 1ihb_A 62 -NPDLKDRTGFAVIHDAARA-GFLDTLQTLLEF------QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128 (162)
T ss_dssp -CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC
T ss_pred -CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC
Confidence 5789999999999999985 778899999997 568999999999999999999999999999998765
No 23
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=8.4e-20 Score=175.47 Aligned_cols=134 Identities=19% Similarity=0.189 Sum_probs=114.2
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|..++++.|++.. .+++.. +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 4 ~t~L~~A~~~g~~~~v~~ll~~~----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 61 (167)
T 3v31_A 4 SLSVHQLAAQGEMLYLATRIEQE----NVINHT-----DE-EGFTPLMWAAAHGQIAVVEFLLQNGA------------D 61 (167)
T ss_dssp CCCHHHHHHTTCHHHHHHHHHHS----SCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred cchHHHHHHCCCHHHHHHHHHcC----CCcCCC-----CC-CCCCHHHHHHHCCCHHHHHHHHHcCC------------C
Confidence 37899999999999999999964 233322 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
++.++..|.||||+|+.. ++.+++++|++. ++++|.+|.+|.||||+|+..|+.+++++|+++.++. ..
T Consensus 62 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 134 (167)
T 3v31_A 62 PQLLGKGRESALSLACSK-GYTDIVKMLLDC------GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDS 134 (167)
T ss_dssp TTCCCTTCCCHHHHHHHH-TCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCcCCCCCcHHHHHHHc-CCHHHHHHHHHC------CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 788999999999999996 778899999987 5679999999999999999999999999999986654 23
Q ss_pred Cceeeee
Q 001317 1003 GQVTIPV 1009 (1102)
Q Consensus 1003 ~~v~l~i 1009 (1102)
|+.++++
T Consensus 135 g~t~l~~ 141 (167)
T 3v31_A 135 GYNSMDL 141 (167)
T ss_dssp SCCHHHH
T ss_pred CCCHHHH
Confidence 5555444
No 24
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.81 E-value=1.4e-19 Score=178.04 Aligned_cols=123 Identities=15% Similarity=0.100 Sum_probs=109.2
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
-.++||+|+.+|+.++++.|++.++ +++.. +. .|.||||+|+..|+.++|++||++|+
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 125 (192)
T 2rfm_A 68 GSTALIWAVKNNRLGIAEKLLSKGS----NVNTK-----DF-SGKTPLMWSIIFGYSEMSYFLLEHGA------------ 125 (192)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTC----CTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------
T ss_pred CccHHHHHHHcCCHHHHHHHHHCCC----CCCCC-----CC-CCCcHHHHHHHcCCHHHHHHHHHCCC------------
Confidence 3589999999999999999999743 33322 22 58999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 997 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Ki 997 (1102)
++|.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+..|+.+++++|++..
T Consensus 126 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 126 NVNDRNLEGETPLIVASKY-GRSEIVKKLLEL------GADISARDLTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp CSSCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 5789999999999999986 778899999997 5689999999999999999999999999999864
No 25
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.81 E-value=1.2e-19 Score=172.15 Aligned_cols=122 Identities=20% Similarity=0.216 Sum_probs=88.3
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
..++|++|+..|..++++.||+. . ..+.+.. +. .|.||||+ +..|+.++|++||++|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~--~~~~~~~-----~~-~g~t~L~~-~~~~~~~~v~~Ll~~g~------------ 59 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-E--LVHPDAL-----NR-FGKTALQV-MMFGSTAIALELLKQGA------------ 59 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-T--CCCTTCC-----CT-TSCCHHHH-SCTTCHHHHHHHHHTTC------------
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-h--CcCcccc-----CC-CCCcHHHH-HHcCCHHHHHHHHHCCC------------
Confidence 35778888888888888888775 1 1222322 12 47788888 77788888888888776
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARK 996 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~K 996 (1102)
++|.+|..|.||||+|+.. |+.+++++|+++ ++++|.+|.+|.||||+|+..|+.+++++|+++
T Consensus 60 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ 123 (156)
T 1bd8_A 60 SPNVQDTSGTSPVHDAART-GFLDTLKVLVEH------GADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT
T ss_pred CCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc
Confidence 4677777788888888774 667788888776 456777888888888888888888888887776
No 26
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.81 E-value=1.2e-19 Score=160.33 Aligned_cols=92 Identities=24% Similarity=0.225 Sum_probs=85.1
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCc
Q 001317 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNS 968 (1102)
Q Consensus 889 g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vN 968 (1102)
|+||||+|++.|+.++|++||++|+ ++|.+|..|.||||+|+.. ++.+++++|++. ++++|
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~------------~~n~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~ 62 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGA------------DVNAKDKNGRTPLHLAARN-GHLEVVKLLLEA------GADVN 62 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTC------------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCC------------CCcccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCC
Confidence 7899999999999999999999998 5789999999999999985 788999999997 57899
Q ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 969 ILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 969 arD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
.+|.+|.||||+|+..|+.+++++|++++++
T Consensus 63 ~~d~~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 63 AKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999999998763
No 27
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.80 E-value=6.6e-20 Score=187.77 Aligned_cols=133 Identities=17% Similarity=0.152 Sum_probs=109.5
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChH--------HHhhhcCchHHHHHHHcCCHHHHHHHHH---cCCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRE--------SLEMLWEIQLLNRAVKMKCRRMVDLLIH---YSLT 914 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e--------~~~~~~g~TlLH~AV~~gs~~IVeLLL~---~GAd 914 (1102)
-.++||+|+.+|+.++|++||+.+ .+++..... ......|+||||+|+..|+.++|++||+ +|+
T Consensus 93 g~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga- 167 (260)
T 3jxi_A 93 GQTALHIAIERRCKHYVELLVEKG----ADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA- 167 (260)
T ss_dssp SBCHHHHHHHTTCHHHHHHHHHTT----CCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC-
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCC----CCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC-
Confidence 358999999999999999999964 333322100 0000258999999999999999999999 777
Q ss_pred CCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCc--------HHHHHHHhCCCCCCCCCCCC-------cCCCCCCCCHHH
Q 001317 915 SSNDTPQKYIFPPNLAGPGGITPLHLAACTSDS--------DDIIDALTNDPQEIGPSSWN-------SILDASGHSPYS 979 (1102)
Q Consensus 915 ~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~--------eeVVeLLL~~p~~iGagA~v-------NarD~~G~TPLH 979 (1102)
++|.+|..|+||||+|+..... .+++++|+++ +|++ +++|.+|.||||
T Consensus 168 -----------~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 168 -----------DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK------CAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp -----------CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCCTTSCCHHH
T ss_pred -----------CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh------CcccccccchhhcccCCCCCHHH
Confidence 5899999999999999975331 4799999987 4566 789999999999
Q ss_pred HHHHcCCHHHHHHHHHhhccc
Q 001317 980 YALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 980 yAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|+..|+.+++++|+++..+.
T Consensus 231 ~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 231 MAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHhCCCc
Confidence 999999999999999998775
No 28
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.80 E-value=2.3e-19 Score=173.91 Aligned_cols=121 Identities=18% Similarity=0.232 Sum_probs=107.7
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++|+++|+ +
T Consensus 48 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 105 (169)
T 2y1l_E 48 WTPLHLAAFNGHLEIVEVLLKNG----ADVNAV-----DH-AGMTPLRLAALFGHLEIVEVLLKNGA------------D 105 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC----CCCCcc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 48999999999999999999953 333433 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARK 996 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~K 996 (1102)
+|.+|..|.||||+|+.. ++.+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|+++
T Consensus 106 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~ 168 (169)
T 2y1l_E 106 VNANDMEGHTPLHLAAMF-GHLEIVEVLLKN------GADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168 (169)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred CCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence 788999999999999985 788999999998 567999999999999999999999999999875
No 29
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.80 E-value=7.9e-20 Score=175.31 Aligned_cols=122 Identities=18% Similarity=0.175 Sum_probs=106.8
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.++++.|++.. .+++.. +. .|+||||+|+..|+.++|++||++|+ +
T Consensus 43 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 100 (165)
T 3twr_A 43 STPLHFAAGYNRVSVVEYLLQHG----ADVHAK-----DK-GGLVPLHNACSYGHYEVAELLVKHGA------------V 100 (165)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcChHHHHHHHHhcC----CCCCcc-----CC-CCCCHHHHHHHcCcHHHHHHHHhCCC------------C
Confidence 48999999999999999999964 344433 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLA 998 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia 998 (1102)
+|.+|..|.||||+|+.. ++.+++++|+++ +++++.+|.+|.||||+|+. |+.+++++|+++.+
T Consensus 101 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 101 VNVADLWKFTPLHEAAAK-GKYEICKLLLQH------GADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp TTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC--
T ss_pred CCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCcccCCCCCChhHhHhc-CChHHHHHHhhccc
Confidence 789999999999999985 788999999997 57899999999999999877 99999999998764
No 30
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.80 E-value=2.1e-19 Score=170.43 Aligned_cols=121 Identities=18% Similarity=0.184 Sum_probs=106.4
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
-.++||+ +..|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++|+++|+
T Consensus 36 g~t~L~~-~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------ 92 (156)
T 1bd8_A 36 GKTALQV-MMFGSTAIALELLKQG----ASPNVQ-----DT-SGTSPVHDAARTGFLDTLKVLVEHGA------------ 92 (156)
T ss_dssp SCCHHHH-SCTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CCcHHHH-HHcCCHHHHHHHHHCC----CCCCCc-----CC-CCCCHHHHHHHcCcHHHHHHHHHcCC------------
Confidence 3589999 9999999999999964 334433 22 59999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 997 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Ki 997 (1102)
++|.+|..|.||||+|+.. ++.+++++|++. ++++.+|.+|.||||+|+..|+.+++++|++++
T Consensus 93 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~-------~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~~ 156 (156)
T 1bd8_A 93 DVNVPDGTGALPIHLAVQE-GHTAVVSFLAAE-------SDLHRRDARGLTPLELALQRGAQDLVDILQGHM 156 (156)
T ss_dssp CSCCCCTTSCCHHHHHHHH-TCHHHHHHHHTT-------SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTTC
T ss_pred CCCCcCCCCCcHHHHHHHh-ChHHHHHHHHhc-------cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhhC
Confidence 5789999999999999985 788999999985 468999999999999999999999999999864
No 31
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.80 E-value=2.3e-19 Score=183.71 Aligned_cols=131 Identities=22% Similarity=0.258 Sum_probs=108.5
Q ss_pred hhHHHHHH---hcCcchhHHHHHHHHHhcc-------ccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCC
Q 001317 847 KFLLVFSV---DRGCCALVKAILDILVEGN-------LSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSS 916 (1102)
Q Consensus 847 ktLL~FAa---drGwcaVVK~LLd~L~~g~-------v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~ 916 (1102)
+++||+|+ ..|+.++++.||+.+.+.. ..++. ....|+||||+||..|+.++|++||++|++
T Consensus 47 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~------~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-- 118 (260)
T 3jxi_A 47 KTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRD------VYYRGQTALHIAIERRCKHYVELLVEKGAD-- 118 (260)
T ss_dssp CCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCC------SSEESBCHHHHHHHTTCHHHHHHHHHTTCC--
T ss_pred CcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccc------cccCCCCHHHHHHHcCCHHHHHHHHhCCCC--
Confidence 49999999 7799999999999875521 11111 112589999999999999999999999984
Q ss_pred CCCCCCcCCCCCCCC--------------CCCChHHHHHHhcCCcHHHHHHHhCCCCCCC-CCCCCcCCCCCCCCHHHHH
Q 001317 917 NDTPQKYIFPPNLAG--------------PGGITPLHLAACTSDSDDIIDALTNDPQEIG-PSSWNSILDASGHSPYSYA 981 (1102)
Q Consensus 917 ~gsa~~ylfdpnakd--------------~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iG-agA~vNarD~~G~TPLHyA 981 (1102)
+|.++ ..|.||||+||.. |+.++|++|++. | .++++|.+|.+|.||||+|
T Consensus 119 ----------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~----~~~ga~~~~~d~~g~TpLh~A 183 (260)
T 3jxi_A 119 ----------VHAQARGRFFQPKDEGGYFYFGELPLSLAACT-NQPHIVHYLTEN----GHKQADLRRQDSRGNTVLHAL 183 (260)
T ss_dssp ----------TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHT-TCHHHHHHHHHC----SSCCCCTTCCCTTSCCHHHHH
T ss_pred ----------cCccccccccCcccccccccCCCCHHHHHHHc-CCHHHHHHHHhc----cccCCCCcccCCCCCcHHHHH
Confidence 45555 6899999999985 788999999993 2 2678999999999999999
Q ss_pred HHcCC---------HHHHHHHHHhhccc
Q 001317 982 LMKNN---------HAYNKLVARKLADR 1000 (1102)
Q Consensus 982 a~~G~---------~eiVeLLl~Kia~~ 1000 (1102)
++.|+ .+++++|+++.++.
T Consensus 184 ~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 184 VAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp HHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 99888 79999999997653
No 32
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.80 E-value=3.2e-19 Score=182.74 Aligned_cols=136 Identities=23% Similarity=0.259 Sum_probs=108.9
Q ss_pred hhHHHHHHhc---CcchhHHHHHHHHHhccc-c--CCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 001317 847 KFLLVFSVDR---GCCALVKAILDILVEGNL-S--MDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTP 920 (1102)
Q Consensus 847 ktLL~FAadr---GwcaVVK~LLd~L~~g~v-~--i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa 920 (1102)
+++||+|+.+ |+.+++++||+.+++.+. . ++.... . ....|.||||+|+..|+.++|++||++|++
T Consensus 44 ~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~-~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~------ 115 (256)
T 2etb_A 44 KTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCT-D-EFYQGHSALHIAIEKRSLQCVKLLVENGAD------ 115 (256)
T ss_dssp BCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCC-S-TTTTTCCHHHHHHHTTCHHHHHHHHHTTCC------
T ss_pred CCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccc-c-ccccCCCHHHHHHHcCCHHHHHHHHHcCCC------
Confidence 4899999999 999999999998766320 0 000000 0 012599999999999999999999999984
Q ss_pred CCcCCCCCCCCCC-------------CChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHH--cC
Q 001317 921 QKYIFPPNLAGPG-------------GITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALM--KN 985 (1102)
Q Consensus 921 ~~ylfdpnakd~~-------------G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~--~G 985 (1102)
+|.++.. |.||||+|+.. |+.++|++|++.+. .++++|.+|.+|.||||+|+. .|
T Consensus 116 ------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~~~---~ga~~n~~d~~g~TpLh~A~~~~~~ 185 (256)
T 2etb_A 116 ------VHLRACGRFFQKHQGTCFYFGELPLSLAACT-KQWDVVTYLLENPH---QPASLEATDSLGNTVLHALVMIADN 185 (256)
T ss_dssp ------TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT-TCHHHHHHHHHCSS---CCCCTTCCCTTSCCHHHHHHHHCCS
T ss_pred ------CCcccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHhccc---cCCCcCccCCCCCCHHHHHHHcccC
Confidence 5555554 99999999985 78899999999310 167899999999999999999 88
Q ss_pred CHH-------HHHHHHHhhccc
Q 001317 986 NHA-------YNKLVARKLADR 1000 (1102)
Q Consensus 986 ~~e-------iVeLLl~Kia~~ 1000 (1102)
+.+ ++++|+++.++.
T Consensus 186 ~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 186 SPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHcCCCc
Confidence 988 999999987654
No 33
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.80 E-value=5.5e-19 Score=177.57 Aligned_cols=131 Identities=18% Similarity=0.142 Sum_probs=109.0
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCCh--------HHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSR--------ESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSN 917 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~--------e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~ 917 (1102)
-.++||+|+.+|+.+++++||+.+++ ++.... ...+ ..|.||||+|+..|+.++|++||++|+
T Consensus 75 g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~ga---- 145 (232)
T 2rfa_A 75 GQTALHIAVINQNVNLVRALLARGAS----VSARATGSVFHYRPHNLI-YYGEHPLSFAACVGSEEIVRLLIEHGA---- 145 (232)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCCSGGGSCCTTCSC-CCCSSHHHHHHHHTCHHHHHHHHHTTC----
T ss_pred CcCHHHHHHHcCCHHHHHHHHhCCCC----CCcccCCcceeecccccc-cCCCCHHHHHHHcCCHHHHHHHHHCCC----
Confidence 35899999999999999999996433 232210 0001 148999999999999999999999998
Q ss_pred CCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHH----HHHhCCCCCCCCCCCC------cCCCCCCCCHHHHHHHcCCH
Q 001317 918 DTPQKYIFPPNLAGPGGITPLHLAACTSDSDDII----DALTNDPQEIGPSSWN------SILDASGHSPYSYALMKNNH 987 (1102)
Q Consensus 918 gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVV----eLLL~~p~~iGagA~v------NarD~~G~TPLHyAa~~G~~ 987 (1102)
++|.+|..|.||||+|+.. +..+++ ++|++. +++. +.+|..|.||||+|+.+|+.
T Consensus 146 --------~~~~~d~~g~t~L~~A~~~-~~~~~~~~i~~~Ll~~------g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 146 --------DIRAQDSLGNTVLHILILQ-PNKTFACQMYNLLLSY------DGGDHLKSLELVPNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp --------CTTCCCTTSCCHHHHHHTC-SCHHHHHHHHHHHHHT------TCSCSSCCGGGCCCTTSCCHHHHHHHHTCH
T ss_pred --------CCCCCCCCCCCHHHHHHHc-CChHHHHHHHHHHHhc------CCchhhhhhhccCCCCCCCHHHHHHHcCCH
Confidence 5799999999999999985 677777 999988 3344 69999999999999999999
Q ss_pred HHHHHHHHhhccc
Q 001317 988 AYNKLVARKLADR 1000 (1102)
Q Consensus 988 eiVeLLl~Kia~~ 1000 (1102)
+++++|+++....
T Consensus 211 ~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 211 VMFQHLMQKRKHI 223 (232)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHhcCccc
Confidence 9999999998765
No 34
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.80 E-value=1.1e-19 Score=186.26 Aligned_cols=133 Identities=14% Similarity=0.089 Sum_probs=110.3
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHH-------HhhhcCchHHHHHHHcCCHHHHHHHHH---cCCCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRES-------LEMLWEIQLLNRAVKMKCRRMVDLLIH---YSLTS 915 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~-------~~~~~g~TlLH~AV~~gs~~IVeLLL~---~GAd~ 915 (1102)
-.++||+|+.+|+.+++++||+.++ +++...... .....|.||||+|+..|+.++|++||+ +|+
T Consensus 90 g~t~L~~A~~~g~~~~v~~Ll~~ga----~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga-- 163 (256)
T 2etb_A 90 GHSALHIAIEKRSLQCVKLLVENGA----DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPA-- 163 (256)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC--
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCC----CCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC--
Confidence 3599999999999999999999643 333221000 000028999999999999999999999 887
Q ss_pred CCCCCCCcCCCCCCCCCCCChHHHHHHhc-CCcHH-------HHHHHhCCCCCCCCCCCC-------cCCCCCCCCHHHH
Q 001317 916 SNDTPQKYIFPPNLAGPGGITPLHLAACT-SDSDD-------IIDALTNDPQEIGPSSWN-------SILDASGHSPYSY 980 (1102)
Q Consensus 916 ~~gsa~~ylfdpnakd~~G~TPLHiAA~~-~g~ee-------VVeLLL~~p~~iGagA~v-------NarD~~G~TPLHy 980 (1102)
++|.+|..|+||||+|+.. .+..+ ++++|+++ +|++ |.+|..|.||||+
T Consensus 164 ----------~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~------ga~~~~~~~~~~~~d~~g~tpL~~ 227 (256)
T 2etb_A 164 ----------SLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQM------GARLCPTVQLEEISNHQGLTPLKL 227 (256)
T ss_dssp ----------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHSTTCCGGGCCCTTSCCHHHH
T ss_pred ----------CcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHc------CCCcccccccccccCCCCCCHHHH
Confidence 5899999999999999973 36666 99999997 5677 9999999999999
Q ss_pred HHHcCCHHHHHHHHHhhccc
Q 001317 981 ALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 981 Aa~~G~~eiVeLLl~Kia~~ 1000 (1102)
|+.+|+.+++++|+++..+.
T Consensus 228 A~~~g~~~~v~~Ll~~g~~~ 247 (256)
T 2etb_A 228 AAKEGKIEIFRHILQREFSG 247 (256)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHhCCCCC
Confidence 99999999999999997765
No 35
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=4.3e-19 Score=177.07 Aligned_cols=139 Identities=21% Similarity=0.190 Sum_probs=116.1
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.+.. .+++.. ...|.||||+|+..|+.++|++|+++|+ +
T Consensus 73 ~t~L~~A~~~~~~~~~~~Ll~~g~~--~~~~~~------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 132 (228)
T 2dzn_A 73 WTPFHIACSVGNLEVVKSLYDRPLK--PDLNKI------TNQGVTCLHLAVGKKWFEVSQFLIENGA------------S 132 (228)
T ss_dssp CCHHHHHHHHCCHHHHHHHHSSSSC--CCTTCC------CTTCCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCC--cccccC------CcCCCCHHHHHHHcCCHhHHHHHHHcCC------------C
Confidence 4899999999999999999985311 333322 2258999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHH-Hhhccc----c
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVA-RKLADR----R 1001 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl-~Kia~~----~ 1001 (1102)
++.+|..|.||||+|+.. +..+++++|++. | .+++|.+|..|.||||+|+..|+.+++++|+ ++.++. .
T Consensus 133 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~----g-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~ 206 (228)
T 2dzn_A 133 VRIKDKFNQIPLHRAASV-GSLKLIELLCGL----G-KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDN 206 (228)
T ss_dssp SCCCCTTSCCHHHHHHHT-TCHHHHHHHHTT----T-CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCT
T ss_pred ccccCCCCCCHHHHHHHc-CCHHHHHHHHhc----C-cccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCC
Confidence 789999999999999985 788999999997 2 2689999999999999999999999999999 666654 3
Q ss_pred CCceeeeeCc
Q 001317 1002 NGQVTIPVGV 1011 (1102)
Q Consensus 1002 ~~~v~l~i~~ 1011 (1102)
+|..++++..
T Consensus 207 ~g~t~l~~A~ 216 (228)
T 2dzn_A 207 KGAKAEDVAL 216 (228)
T ss_dssp TSCBGGGGCS
T ss_pred CCCcHHHHHH
Confidence 5777777753
No 36
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.80 E-value=3.3e-19 Score=187.90 Aligned_cols=133 Identities=21% Similarity=0.160 Sum_probs=104.0
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHH-hcc-ccCCCCChHHHh---------------------------hhcCchHHHHHH
Q 001317 847 KFLLVFSVDRGCCALVKAILDILV-EGN-LSMDGLSRESLE---------------------------MLWEIQLLNRAV 897 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~-~g~-v~i~~~s~e~~~---------------------------~~~g~TlLH~AV 897 (1102)
.++||+|+.+|+.++++.||+.+. +-+ .+....++.... ...|+||||+|+
T Consensus 112 ~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~ 191 (276)
T 4hbd_A 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAV 191 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 489999999999999999999753 100 011111111110 113789999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhC-CCCCCCCCCCCcCCCCCCCC
Q 001317 898 KMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTN-DPQEIGPSSWNSILDASGHS 976 (1102)
Q Consensus 898 ~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~-~p~~iGagA~vNarD~~G~T 976 (1102)
..|+.++|++||++|+ ++|.+|..|+||||+|+.. |+.++|++|++ . ++++|.+|.+|.|
T Consensus 192 ~~g~~~~v~~Ll~~ga------------d~n~~d~~G~TpLh~A~~~-g~~~iv~~Ll~~~------gad~~~~d~~g~T 252 (276)
T 4hbd_A 192 SHGRVDVVKALLACEA------------DVNVQDDDGSTALMCACEH-GHKEIAGLLLAVP------SCDISLTDRDGST 252 (276)
T ss_dssp HTTCHHHHHHHHHTTC------------CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHTST------TCCTTCCCTTSCC
T ss_pred HcCCHHHHHHHHhCCC------------CCCCCCCCCCCHHHHHHHC-CCHHHHHHHHhcC------CCCCcCcCCCCCC
Confidence 9999999999999988 5788999999999999985 67889999998 4 5678999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHhhc
Q 001317 977 PYSYALMKNNHAYNKLVARKLA 998 (1102)
Q Consensus 977 PLHyAa~~G~~eiVeLLl~Kia 998 (1102)
|||+|+.+|+.+++++|+++.+
T Consensus 253 pL~~A~~~g~~~iv~~Ll~~~~ 274 (276)
T 4hbd_A 253 ALMVALDAGQSEIASMLYSRMN 274 (276)
T ss_dssp HHHHHHHHTCHHHHHHHHHHCC
T ss_pred HHHHHHHcCCHHHHHHHHhccC
Confidence 9999999999999999998764
No 37
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.79 E-value=4e-19 Score=178.29 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=117.7
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.+....++++.. ...|.||||+|+..|+.++|++||++|+ +
T Consensus 80 ~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 141 (241)
T 1k1a_A 80 QTAAHLACEHRSPTCLRALLDSAAPGTLDLEAR------NYDGLTALHVAVNTECQETVQLLLERGA------------D 141 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCC------CTTSCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCcccccccc------CcCCCcHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 489999999999999999999865433343432 2258999999999999999999999998 4
Q ss_pred CCCCC-CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----c
Q 001317 927 PNLAG-PGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----R 1001 (1102)
Q Consensus 927 pnakd-~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~ 1001 (1102)
++.++ ..|.||||+|+.. +..+++++|++. ++++|.+|..|.||||+|+..|+.+++++|+++.++. .
T Consensus 142 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 214 (241)
T 1k1a_A 142 IDAVDIKSGRSPLIHAVEN-NSLSMVQLLLQH------GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNC 214 (241)
T ss_dssp TTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred cccccccCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCC
Confidence 67777 7899999999985 788899999997 5789999999999999999999999999999997764 2
Q ss_pred CCceeeeeCcc
Q 001317 1002 NGQVTIPVGVE 1012 (1102)
Q Consensus 1002 ~~~v~l~i~~~ 1012 (1102)
+|+.++++...
T Consensus 215 ~g~tpl~~A~~ 225 (241)
T 1k1a_A 215 HNDTPLMVARS 225 (241)
T ss_dssp TSCCTTTTCSS
T ss_pred CCCCHHHHHHh
Confidence 46666666543
No 38
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.79 E-value=3.7e-19 Score=189.47 Aligned_cols=143 Identities=19% Similarity=0.134 Sum_probs=118.4
Q ss_pred hhhhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCC
Q 001317 844 SRFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKM---KCRRMVDLLIHYSLTSSNDTP 920 (1102)
Q Consensus 844 ~RfktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~---gs~~IVeLLL~~GAd~~~gsa 920 (1102)
...-..|+.|+..|....++.|+..+.+ +............|.||||+|+.. |+.++|++||++|+
T Consensus 128 ~~~l~~l~~a~~~~d~~~~~~ll~~g~~----~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga------- 196 (278)
T 1dcq_A 128 AAKLHSLCEAVKTRDIFGLLQAYADGVD----LTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSG------- 196 (278)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCC----TTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCS-------
T ss_pred chhhhhhhhHhhhcccHHHHHHHHhhcc----hhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCC-------
Confidence 3444788999999999999999886433 221100000122589999999999 99999999999998
Q ss_pred CCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 921 QKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 921 ~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++|.+|..|.||||+||.. |+.++|++|+++ ||++|++|.+|.||||+|+..|+.+++++|+++.+++
T Consensus 197 -----~in~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 197 -----NLDKQTGKGSTALHYCCLT-DNAECLKLLLRG------KASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp -----CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred -----CccccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 5799999999999999985 788999999997 6789999999999999999999999999999999988
Q ss_pred cCCceeeee
Q 001317 1001 RNGQVTIPV 1009 (1102)
Q Consensus 1001 ~~~~v~l~i 1009 (1102)
.+.|+.+.+
T Consensus 265 ~~~~~~v~~ 273 (278)
T 1dcq_A 265 FNSHVHVEY 273 (278)
T ss_dssp CCSSCCCCC
T ss_pred CCcceeeec
Confidence 777766654
No 39
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.79 E-value=4.9e-19 Score=177.95 Aligned_cols=141 Identities=16% Similarity=0.173 Sum_probs=112.1
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCcCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTP-QKYIF 925 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa-~~ylf 925 (1102)
.++||+|+..|+.++++.|++...+-. .... . .....|.||||+|+..|+.++|++||++|++...... ..+.+
T Consensus 38 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~--~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~ 112 (232)
T 2rfa_A 38 ETALHIAALYDNLEAAMVLMEAAPELV--FEPM--T-SELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHY 112 (232)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHCGGGG--GCCC--C-STTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCchhc--cccc--c-ccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceee
Confidence 489999999999999999999754411 0000 0 0122589999999999999999999999996422111 12233
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHH----HHHHHhhcc
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYN----KLVARKLAD 999 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiV----eLLl~Kia~ 999 (1102)
.++..|..|.||||+|+.. ++.+++++|+++ ++++|++|.+|.||||+|+..|+.+++ ++|+++.++
T Consensus 113 ~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~ 183 (232)
T 2rfa_A 113 RPHNLIYYGEHPLSFAACV-GSEEIVRLLIEH------GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183 (232)
T ss_dssp CTTCSCCCCSSHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCS
T ss_pred cccccccCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCc
Confidence 5566777999999999996 788999999997 578999999999999999999999988 888888764
No 40
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.79 E-value=1.7e-19 Score=166.23 Aligned_cols=115 Identities=15% Similarity=0.110 Sum_probs=96.9
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.++++.|++.. .+++.. +. .|+||||+|+..|+.++|++||++|+ +
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 65 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKG----EDVNRT-----LE-GGRKPLHYAADCGQLEILEFLLLKGA------------D 65 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTT----CCTTSC-----CT-TSSCHHHHHHHTTCHHHHHHHHTTTC------------C
T ss_pred chHHHHHHHcCCHHHHHHHHHcC----CCcCcc-----CC-CCCcHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 58999999999999999999853 333433 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHH
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLV 993 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLL 993 (1102)
+|.+|..|+||||+|+.. ++.+++++|+++ +++++.+|.+|.||||+|+ +.++.++|
T Consensus 66 ~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~---~~~~~~ll 122 (123)
T 3aaa_C 66 INAPDKHHITPLLSAVYE-GHVSCVKLLLSK------GADKTVKGPDGLTAFEATD---NQAIKALL 122 (123)
T ss_dssp TTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHCC---CHHHHHHH
T ss_pred CCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHhC---CHHHHHHh
Confidence 789999999999999985 778899999997 5679999999999999994 44455444
No 41
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.79 E-value=5.1e-19 Score=183.25 Aligned_cols=134 Identities=19% Similarity=0.151 Sum_probs=108.1
Q ss_pred hhHHHHHHhc---CcchhHHHHHHHHHhcc-----ccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 001317 847 KFLLVFSVDR---GCCALVKAILDILVEGN-----LSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSND 918 (1102)
Q Consensus 847 ktLL~FAadr---GwcaVVK~LLd~L~~g~-----v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~g 918 (1102)
+++||+|+.. |+.+++++||+.+++.. ++..... ....|.||||+|+..|+.++|++||++|++
T Consensus 55 ~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~----~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~---- 126 (273)
T 2pnn_A 55 KTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTD----SYYKGQTALHIAIERRNMTLVTLLVENGAD---- 126 (273)
T ss_dssp CCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCS----TTTTTCCHHHHHHHTTCHHHHHHHHHTTCC----
T ss_pred CCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhccccc----ccCCCCCHHHHHHHcCCHHHHHHHHHCCCC----
Confidence 5999999986 99999999999876421 1111000 112599999999999999999999999984
Q ss_pred CCCCcCCCCCCCCC--------------CCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHc
Q 001317 919 TPQKYIFPPNLAGP--------------GGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMK 984 (1102)
Q Consensus 919 sa~~ylfdpnakd~--------------~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~ 984 (1102)
+|.++. .|.||||+|+.. ++.++|++|++.+. .++++|.+|.+|.||||+|+..
T Consensus 127 --------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~~~---~gad~~~~d~~g~tpLh~A~~~ 194 (273)
T 2pnn_A 127 --------VQAAANGDFFKKTKGRPGFYFGELPLSLAACT-NQLAIVKFLLQNSW---QPADISARDSVGNTVLHALVEV 194 (273)
T ss_dssp --------TTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHT-TCHHHHHHHHHCSS---CCCCTTCCCTTSCCHHHHHHHH
T ss_pred --------cCccccccccccccccccccCCCCHHHHHHHc-CCHHHHHHHHhccc---CCCCceeeCCCCCcHHHHHHHc
Confidence 444444 899999999985 78899999999310 2678999999999999999999
Q ss_pred CC---------HHHHHHHHHhhccc
Q 001317 985 NN---------HAYNKLVARKLADR 1000 (1102)
Q Consensus 985 G~---------~eiVeLLl~Kia~~ 1000 (1102)
|+ .+++++|+++.++.
T Consensus 195 ~~~~~~~~~~~~~~v~~Ll~~ga~~ 219 (273)
T 2pnn_A 195 ADNTVDNTKFVTSMYNEILILGAKL 219 (273)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchhHHHHHHHHHHHHHHhhhhc
Confidence 99 89999999987663
No 42
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.79 E-value=6.6e-19 Score=183.09 Aligned_cols=149 Identities=17% Similarity=0.115 Sum_probs=119.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCc---
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKY--- 923 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~y--- 923 (1102)
.++||+|+..|+.+++++||+.+ .+++.. +. .|+||||+|+..|+.++|++||++|++.......+.
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~-----~~-~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l 143 (299)
T 1s70_B 74 LTALHQACIDDNVDMVKFLVENG----ANINQP-----DN-EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143 (299)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCC----CCCCCC-----CC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence 49999999999999999999954 344433 22 599999999999999999999999986421111000
Q ss_pred -------------------C--------------------------CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCC
Q 001317 924 -------------------I--------------------------FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDP 958 (1102)
Q Consensus 924 -------------------l--------------------------fdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p 958 (1102)
. ......+..|.||||+||.. |+.++|++|++.
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~- 221 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAK-GYTEVLKLLIQA- 221 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHH-TCHHHHHHHHTT-
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHC-CcHHHHHHHHHc-
Confidence 0 01223567899999999996 788899999987
Q ss_pred CCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeCcc
Q 001317 959 QEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVGVE 1012 (1102)
Q Consensus 959 ~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~~~ 1012 (1102)
++++|.+|.+|.||||+|+..|+.+++++|++++++. ..|+.++++...
T Consensus 222 -----g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 222 -----RYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp -----TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred -----CCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 5789999999999999999999999999999997765 368888888754
No 43
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.79 E-value=2.1e-19 Score=186.08 Aligned_cols=133 Identities=13% Similarity=0.102 Sum_probs=108.7
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChH--------HHhhhcCchHHHHHHHcCCHHHHHHHHH---cCCC
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRE--------SLEMLWEIQLLNRAVKMKCRRMVDLLIH---YSLT 914 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e--------~~~~~~g~TlLH~AV~~gs~~IVeLLL~---~GAd 914 (1102)
-.++||+|+.+|+.++|++||+.++ +++..... ......|.||||+|+..|+.++|++||+ +|+
T Consensus 101 g~tpL~~A~~~g~~~~v~~Ll~~ga----~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga- 175 (273)
T 2pnn_A 101 GQTALHIAIERRNMTLVTLLVENGA----DVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA- 175 (273)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTC----CTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCC-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCC----CcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCC-
Confidence 3599999999999999999999643 33322100 0000148999999999999999999999 887
Q ss_pred CCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCc--------HHHHHHHhCCCCCCCCCCCCc-------CCCCCCCCHHH
Q 001317 915 SSNDTPQKYIFPPNLAGPGGITPLHLAACTSDS--------DDIIDALTNDPQEIGPSSWNS-------ILDASGHSPYS 979 (1102)
Q Consensus 915 ~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~--------eeVVeLLL~~p~~iGagA~vN-------arD~~G~TPLH 979 (1102)
++|.+|..|+||||+|+..+.. .+++++|++. +|++| .+|.+|.||||
T Consensus 176 -----------d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~------ga~~n~~~~~~~~~d~~g~TpL~ 238 (273)
T 2pnn_A 176 -----------DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL------GAKLHPTLKLEEITNRKGLTPLA 238 (273)
T ss_dssp -----------CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH------HHHHCTTCCGGGCCCTTSCCHHH
T ss_pred -----------CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh------hhhcccccccccccCCCCCCHHH
Confidence 5899999999999999986331 6899999987 45675 59999999999
Q ss_pred HHHHcCCHHHHHHHHHhhccc
Q 001317 980 YALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 980 yAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|+.+|+.+++++|+++.++.
T Consensus 239 ~A~~~g~~~iv~~Ll~~ga~d 259 (273)
T 2pnn_A 239 LAASSGKIGVLAYILQREIHE 259 (273)
T ss_dssp HHHHTTCHHHHHHHHHHHTC-
T ss_pred HHHHhChHHHHHHHHHCCCCC
Confidence 999999999999999999854
No 44
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.79 E-value=1.4e-19 Score=182.37 Aligned_cols=126 Identities=5% Similarity=-0.101 Sum_probs=107.0
Q ss_pred hhHHHHHHhcCcc----hhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCC------HHHHHHHHHcCCCCC
Q 001317 847 KFLLVFSVDRGCC----ALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC------RRMVDLLIHYSLTSS 916 (1102)
Q Consensus 847 ktLL~FAadrGwc----aVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs------~~IVeLLL~~GAd~~ 916 (1102)
++|||+|+.+|+. +++++||+.+ ++++.. + ..|+||||+|+..++ .+||++||++|+
T Consensus 39 ~T~Lh~A~~~~~~~~~~~iv~~Ll~~G----advn~~-----d-~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Ga--- 105 (186)
T 3t8k_A 39 SNILYDVLRNNNDEARYKISMFLINKG----ADIKSR-----T-KEGTTLFFPLFQGGGNDITGTTELCKIFLEKGA--- 105 (186)
T ss_dssp TTHHHHHTTCSCHHHHHHHHHHHHHTT----CCSSCC-----C-TTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTC---
T ss_pred CCHHHHHHHcCCcchHHHHHHHHHHCC----CCCCCC-----C-CCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCC---
Confidence 4999999999975 4899999854 445533 2 269999999999987 689999999999
Q ss_pred CCCCCCcCCCCCCCCCCCC-hHHHHHHhcC----CcHHHHHHHhC-CCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHH
Q 001317 917 NDTPQKYIFPPNLAGPGGI-TPLHLAACTS----DSDDIIDALTN-DPQEIGPSSWNSILDASGHSPYSYALMKNNHAYN 990 (1102)
Q Consensus 917 ~gsa~~ylfdpnakd~~G~-TPLHiAA~~~----g~eeVVeLLL~-~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiV 990 (1102)
++|++|..|. ||||+|+..+ +..+++++|++ + ||++|++|..|.||||||+..|+.++|
T Consensus 106 ---------din~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~------gad~~~~d~~G~TpL~~A~~~~~~~~v 170 (186)
T 3t8k_A 106 ---------DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS------GLQLLIKDKWGLTALEFVKRCQKPIAL 170 (186)
T ss_dssp ---------CSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST------TCCTTCCCTTSCCHHHHHHTTTCHHHH
T ss_pred ---------CCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc------CCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 5899999999 9999999832 12468999998 6 678999999999999999999999999
Q ss_pred HHHHHhhccc
Q 001317 991 KLVARKLADR 1000 (1102)
Q Consensus 991 eLLl~Kia~~ 1000 (1102)
++|++.+.+.
T Consensus 171 ~~L~~~~~~~ 180 (186)
T 3t8k_A 171 KMMEDYIKKY 180 (186)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 45
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.79 E-value=2e-19 Score=175.55 Aligned_cols=125 Identities=18% Similarity=0.180 Sum_probs=111.3
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.+++++||+.+ .+++.. +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 97 (179)
T 3f6q_A 40 FSPLHWACREGRSAVVEMLIMRG----ARINVM-----NR-GDDTPLHLAASHGHRDIVQKLLQYKA------------D 97 (179)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCcHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 48999999999999999999964 334433 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.+|..|.||||+|+.. ++.+++++|+++ +++++.+|..|.||||+|+..++.+++++|+++.++-
T Consensus 98 ~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 98 INAVNEHGNVPLHYACFW-GQDQVAEDLVAN------GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL 164 (179)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTTCCC
T ss_pred CCccCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhhcCc
Confidence 789999999999999985 778999999998 5789999999999999999999999999999987765
No 46
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.79 E-value=5.7e-20 Score=171.97 Aligned_cols=123 Identities=20% Similarity=0.146 Sum_probs=100.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.++++.||+.. .+++.. +. .|+||||+|+..|+.++|++||++|+ +
T Consensus 11 ~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 68 (137)
T 3c5r_A 11 ETLLHIASIKGDIPSVEYLLQNG----SDPNVK-----DH-AGWTPLHEACNHGHLKVVELLLQHKA------------L 68 (137)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT----CCSCCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC----CCCCcC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------c
Confidence 48999999999999999999853 333432 22 58899999999999999999999988 4
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLA 998 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia 998 (1102)
++.+|..|.||||+|+.. ++.+++++|++. +++++.+|..|.||||+|+..++.+++++|.+..+
T Consensus 69 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 69 VNTTGYQNDSPLHDAAKN-GHVDIVKLLLSY------GASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp TTCCCGGGCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred ccCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 788899999999999984 778899999987 56789999999999999999998888888776543
No 47
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.78 E-value=4.7e-19 Score=190.84 Aligned_cols=130 Identities=16% Similarity=0.146 Sum_probs=112.7
Q ss_pred hhHHHHHHhcC--cchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 001317 847 KFLLVFSVDRG--CCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (1102)
Q Consensus 847 ktLL~FAadrG--wcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~yl 924 (1102)
.++||+|+..| +.++|++||+.++ +++.. +. .|+||||+|+..|+.++|++||++|++. ..
T Consensus 139 ~t~L~~A~~~g~~~~~~v~~Ll~~ga----~~~~~-----d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-------~~ 201 (364)
T 3ljn_A 139 QTALHWCVGLGPEYLEMIKILVQLGA----SPTAK-----DK-ADETPLMRAMEFRNREALDLMMDTVPSK-------SS 201 (364)
T ss_dssp CCHHHHHHHSCGGGHHHHHHHHHHTC----CTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHHCSCS-------SS
T ss_pred CCHHHHHHHcCCchHHHHHHHHHcCC----CCccc-----CC-CCCCHHHHHHHcCCHHHHHHHHhccccc-------cc
Confidence 59999999999 9999999999743 33322 22 5899999999999999999999999841 11
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 925 fdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
.++|.+|..|.||||+||.. |+.++|++|+++ +|++|.+|..|.||||+|+..|+.+++++|+++.++.
T Consensus 202 ~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 202 LRLDYANKQGNSHLHWAILI-NWEDVAMRFVEM------GIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCTTCCCTTCCCTTHHHHTT-TCHHHHHHHHTT------TCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred ccccccCCCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 24899999999999999984 888999999998 5789999999999999999999999999999996553
No 48
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.78 E-value=8.1e-19 Score=175.82 Aligned_cols=135 Identities=17% Similarity=0.161 Sum_probs=112.2
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++|+++|+ +
T Consensus 74 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 131 (231)
T 3aji_A 74 WSPLHIAASAGXDEIVKALLVKG----AHVNAV-----NQ-NGCTPLHYAASKNRHEIAVMLLEGGA------------N 131 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCHHHHHHHHHHcC----CCCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 48999999999999999999853 333322 22 58899999999999999999999987 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
++.++..|.||||+|+.. ++.+++++|++. ++++|.+|..|.||||+|+..|+.+++++|+++.++- ..
T Consensus 132 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 204 (231)
T 3aji_A 132 PDAKDHYDATAMHRAAAK-GNLKMVHILLFY------KASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKE 204 (231)
T ss_dssp TTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT
T ss_pred CCCcCCCCCcHHHHHHHc-CCHHHHHHHHhc------CCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Confidence 788899999999999985 678899999987 5678999999999999999999999999999987664 24
Q ss_pred CceeeeeC
Q 001317 1003 GQVTIPVG 1010 (1102)
Q Consensus 1003 ~~v~l~i~ 1010 (1102)
|..++++.
T Consensus 205 g~t~l~~A 212 (231)
T 3aji_A 205 EKTPLQVA 212 (231)
T ss_dssp SCCHHHHS
T ss_pred CCCHHHHH
Confidence 66666654
No 49
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.78 E-value=7.4e-19 Score=172.50 Aligned_cols=124 Identities=19% Similarity=0.197 Sum_probs=99.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.++++.|++. ++.+++.. +. .|.||||+|+..|+.++|++||++|.. +
T Consensus 73 ~t~l~~A~~~~~~~~~~~Ll~~---~~~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----------~ 132 (201)
T 3hra_A 73 DSPYLYAGAQGRTEILAYMLKH---ATPDLNKH-----NR-YGGNALIPAAEKGHIDNVKLLLEDGRE-----------D 132 (201)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH---SCCCTTCC-----CT-TSCCSHHHHHHTTCHHHHHHHHHHCCC-----------C
T ss_pred CCHHHHHHHcCCHHHHHHHHhc---cCcccccc-----cC-CCCcHHHHHHHcCCHHHHHHHHHcCCC-----------C
Confidence 4889999999999999998865 33333322 22 588999999999999999999998831 5
Q ss_pred CCCCCCCCChHHHHHHhcCC----cHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHh
Q 001317 927 PNLAGPGGITPLHLAACTSD----SDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARK 996 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g----~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~K 996 (1102)
+|.+|..|.||||+|+..+. +.+++++|+++ +++++.+|.+|.||||+|+.+|+.+++++|+++
T Consensus 133 ~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 133 IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMEN------GADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp TTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred cCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHC------CCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 78889999999999998533 16899999987 567899999999999999999999999998875
No 50
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.78 E-value=3.5e-19 Score=183.27 Aligned_cols=136 Identities=16% Similarity=0.165 Sum_probs=107.3
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++||+|+..|+.+++++|++... .+++.. ...|.||||+|+..|+.++|++||++|+ +
T Consensus 91 ~t~L~~A~~~~~~~~v~~Ll~~~~---~~~~~~------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 149 (253)
T 1yyh_A 91 RTPLHAAVSADAQGVFQILIRNRA---TDLDAR------MHDGTTPLILAARLAVEGMLEDLINSHA------------D 149 (253)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTT---SCTTCC------CTTCCCHHHHHHHHTCSSHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC---CCcccc------CCCCCcHHHHHHHcChHHHHHHHHHcCC------------C
Confidence 478888888888888888888532 222222 2247888888888888888888888887 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
+|.+|..|.||||+|+.. +..+++++|++. ++++|.+|..|.||||+|+.+|+.+++++|+++.++. ..
T Consensus 150 ~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 222 (253)
T 1yyh_A 150 VNAVDDLGKSALHWAAAV-NNVDAAVVLLKN------GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 222 (253)
T ss_dssp TTCBCTTSCBHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccC
Confidence 788899999999999985 677899999987 5678999999999999999999999999999987664 24
Q ss_pred CceeeeeC
Q 001317 1003 GQVTIPVG 1010 (1102)
Q Consensus 1003 ~~v~l~i~ 1010 (1102)
|..++++.
T Consensus 223 g~tpl~~A 230 (253)
T 1yyh_A 223 DRLPRDIA 230 (253)
T ss_dssp CCCHHHHH
T ss_pred CCCHHHHH
Confidence 55555553
No 51
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.78 E-value=3.9e-19 Score=179.95 Aligned_cols=131 Identities=19% Similarity=0.214 Sum_probs=107.7
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.++++.|++...+.... .. .......|.||||+|+..|+.++|++||++|+ +
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 142 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLH--SI--LKATNYNGHTCLHLASIHGYLGIVELLVSLGA------------D 142 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSS--CG--GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHH--HH--hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 48999999999999999999964321100 00 00112258899999999999999999999998 5
Q ss_pred CCCCCC-CCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGP-GGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~-~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.++. .|.||||+|+.. ++.++|++|+++ +|+++.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 143 ~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 143 VNAQEPCNGRTALHLAVDL-QNPDLVSLLLKC------GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp TTCCCTTTCCCHHHHHHHT-TCHHHHHHHHTT------TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 788887 999999999985 788899999987 5789999999999999999999999999999998764
No 52
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.78 E-value=1.2e-18 Score=178.37 Aligned_cols=134 Identities=18% Similarity=0.094 Sum_probs=106.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++||+|+.+|+.++|+.||+...+.. .++.. ...|+||||+||..|+.++|++||++|+ +
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~------~~~g~t~L~~A~~~g~~~~v~~Ll~~ga------------~ 70 (282)
T 1oy3_D 10 DTALHLAVIHQHEPFLDFLLGFSAGHE-YLDLQ------NDLGQTALHLAAILGEASTVEKLYAAGA------------G 70 (282)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHTTSG-GGGCC------CTTSCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCcc-ccccc------CCCCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 489999999999999999999765411 01211 2258999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCC-----------------------------------------CCCC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEI-----------------------------------------GPSS 965 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~i-----------------------------------------GagA 965 (1102)
++.++..|+||||+|+.. ++.+++++|+++.... ..++
T Consensus 71 ~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (282)
T 1oy3_D 71 VLVAERGGHTALHLACRV-RAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRL 149 (282)
T ss_dssp SSCCCTTSCCHHHHHTTT-TCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGG
T ss_pred CCCCCCCCCCHHHHHHHc-CCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhh
Confidence 788888999999999874 7788999998863210 0123
Q ss_pred CCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 966 WNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 966 ~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+++.+|..|.||||+|+..|+.+++++|+++.++-
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 184 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL 184 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 47888999999999999999999999999886654
No 53
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.78 E-value=1.3e-18 Score=173.43 Aligned_cols=124 Identities=15% Similarity=0.152 Sum_probs=82.4
Q ss_pred hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCC
Q 001317 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (1102)
Q Consensus 848 tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdp 927 (1102)
++||+|+..|+.++++.|++.. .+++.. + ..|.||||+|+..|+.++|++||++|+ ++
T Consensus 94 t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~-----~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~~ 151 (223)
T 2f8y_A 94 TPLILAARLAVEGMLEDLINSH----ADVNAV-----D-DLGKSALHWAAAVNNVDAAVVLLKNGA------------NK 151 (223)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTT----CCTTCB-----C-TTSCBHHHHHHHTTCHHHHHHHHHTTC------------CT
T ss_pred cHHHHHHHhCcHHHHHHHHHcC----CCCcCc-----C-CCCCcHHHHHHHcCCHHHHHHHHHcCC------------CC
Confidence 6777777777777777777642 222222 1 136677777777777777777777766 45
Q ss_pred CCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 928 NLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 928 nakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
|.+|..|.||||+|+.. +..+++++|+++ +++++.+|..|.||||+|+.+|+.+++++|+++.+.+
T Consensus 152 ~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~ 217 (223)
T 2f8y_A 152 DMQNNREETPLFLAARE-GSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVR 217 (223)
T ss_dssp TCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSS
T ss_pred CCcCCCCcCHHHHHHHc-CCHHHHHHHHHc------CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCc
Confidence 66677777777777764 556677777766 4566777777777777777777777777777766554
No 54
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.78 E-value=9.1e-19 Score=174.54 Aligned_cols=126 Identities=17% Similarity=0.171 Sum_probs=108.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++... .+++.. ...|.||||+|+..|+.++|++|+++|+ +
T Consensus 59 ~t~L~~A~~~~~~~~v~~Ll~~~~---~~~~~~------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 117 (223)
T 2f8y_A 59 RTPLHAAVSADAQGVFQILIRNRA---TDLDAR------MHDGTTPLILAARLAVEGMLEDLINSHA------------D 117 (223)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHBTT---SCTTCC------CTTCCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCC---CCcccC------CCCCCcHHHHHHHhCcHHHHHHHHHcCC------------C
Confidence 489999999999999999998532 222322 2258899999999999999999999988 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.+|..|.||||+|+.. +..+++++|+++ ++++|.+|..|.||||+|+.+|+.+++++|+++.++.
T Consensus 118 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 184 (223)
T 2f8y_A 118 VNAVDDLGKSALHWAAAV-NNVDAAVVLLKN------GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184 (223)
T ss_dssp TTCBCTTSCBHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred CcCcCCCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 788899999999999985 778899999987 5679999999999999999999999999999987654
No 55
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.77 E-value=3.7e-19 Score=182.75 Aligned_cols=127 Identities=19% Similarity=0.150 Sum_probs=89.0
Q ss_pred hhh-hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCc
Q 001317 845 RFK-FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKY 923 (1102)
Q Consensus 845 Rfk-tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~y 923 (1102)
.+. ++||+|+.+|+.++++.||+.+ .+++.. +. .|+||||+||..|+.++|++||++|+
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga---------- 94 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEV----DDPSLP-----ND-EGITALHNAVCAGHTEIVKFLVQFGV---------- 94 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTT----SSCCCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHHTC----------
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC----------
Confidence 344 6777777777777777777643 233322 12 47778888888888888888887776
Q ss_pred CCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCC-CHHHHH--HHcCCHHHHHHHHHhhccc
Q 001317 924 IFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGH-SPYSYA--LMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 924 lfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~-TPLHyA--a~~G~~eiVeLLl~Kia~~ 1000 (1102)
++|.+|..|+||||+||.. ++.++|++|+++ +|+++.+|..|. ||||+| +.+|+.+++++|+++.++.
T Consensus 95 --~~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~ 165 (239)
T 1ycs_B 95 --NVNAADSDGWTPLHCAASC-NNVQVCKFLVES------GAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 165 (239)
T ss_dssp --CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHT
T ss_pred --CCCccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcc
Confidence 4677777778888887764 667777777776 456777777766 888877 6677777777777776665
No 56
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.77 E-value=2.4e-19 Score=180.61 Aligned_cols=125 Identities=20% Similarity=0.170 Sum_probs=103.6
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCcCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHY-SLTSSNDTPQKYIF 925 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~-GAd~~~gsa~~ylf 925 (1102)
.++||+|+.+|+.++++.||+.+ .+++.. +. .|+||||+||..|+.++|++||++ |+
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~~g~------------ 131 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNR----VGVNGL-----DK-AGSTALYWACHGGHKDIVEMLFTQPNI------------ 131 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHTTSTTC------------
T ss_pred ccccccccccCcHHHHHHHHhCC----CCcccc-----CC-CCCCHHHHHHHcCCHHHHHHHHcCCCC------------
Confidence 48999999999999999999953 334433 22 599999999999999999999998 87
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++|.+|..|.||||+|+.. |+.++|++|++. +|+++++|.+|.||||+|+..|+.+++++|+++.+..
T Consensus 132 ~~~~~d~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 132 ELNQQNKLGDTALHAAAWK-GYADIVQLLLAK------GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp CCCCCCTTSCCHHHHHHHH-TCHHHHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred CccccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 5789999999999999995 788999999997 5789999999999999999999999999998887765
No 57
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.77 E-value=5e-19 Score=182.65 Aligned_cols=125 Identities=19% Similarity=0.133 Sum_probs=110.4
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.||+.++ +++.. +. .|+||||+||..|+.++|++||++|+ +
T Consensus 22 ~t~L~~A~~~g~~~~v~~Ll~~g~----~~~~~-----d~-~g~tpLh~A~~~g~~~~v~~Ll~~ga------------~ 79 (229)
T 2vge_A 22 LVLLLDAALTGELEVVQQAVKEMN----DPSQP-----NE-EGITALHNAICGANYSIVDFLITAGA------------N 79 (229)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHSS----CTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred hHHHHHHHHcCCHHHHHHHHhcCC----CCCCC-----CC-CCCCHHHHHHHcCCHHHHHHHHHCCC------------C
Confidence 489999999999999999999643 33432 22 59999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCC-CCCCCHHHHH--HHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILD-ASGHSPYSYA--LMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD-~~G~TPLHyA--a~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.+|..|+||||+|+.. |+.++|++|++. +++++.+| .+|.||||+| +..|+.+++++|+++.++-
T Consensus 80 ~n~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~------ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~ 149 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASC-NDTVICMALVQH------GAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSM 149 (229)
T ss_dssp TTCCCTTCCCHHHHHHHT-TCHHHHHHHHTT------TCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCc
Confidence 789999999999999985 788999999997 56899997 5999999999 9999999999999997665
No 58
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.77 E-value=7.2e-19 Score=173.29 Aligned_cols=110 Identities=16% Similarity=0.150 Sum_probs=95.6
Q ss_pred hhhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 001317 845 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (1102)
Q Consensus 845 RfktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~yl 924 (1102)
.-.++||+|+.+|+.++++.||+ . .+++.. +. .|+||||+|+..|+.++|++||++|+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~----~~~~~~-----d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga----------- 100 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-D----RDVDAV-----DE-NGRTALLFVAGLGSDKCVRLLAEAGA----------- 100 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-T----SCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-c----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 44699999999999999999998 3 233433 22 59999999999999999999999998
Q ss_pred CCCCCCC-CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHc
Q 001317 925 FPPNLAG-PGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMK 984 (1102)
Q Consensus 925 fdpnakd-~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~ 984 (1102)
++|.++ ..|+||||+|+.. ++.+++++|+++ +++++.+|.+|.||||+|+..
T Consensus 101 -~~~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 101 -DLDHRDMRGGLTALHMAAGY-VRPEVVEALVEL------GADIEVEDERGLTALELAREI 153 (183)
T ss_dssp -CTTCCCSSSSCCHHHHHHHT-TCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHH
T ss_pred -CCCcCCCCCCCCHHHHHHhc-CcHHHHHHHHHc------CCCCcCCCCCCCCHHHHHHHh
Confidence 578888 8899999999985 788999999997 578999999999999999876
No 59
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.77 E-value=2.3e-18 Score=180.85 Aligned_cols=149 Identities=19% Similarity=0.225 Sum_probs=119.3
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCC-------
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDT------- 919 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gs------- 919 (1102)
.++||+|+..|+.++++.|++.+ .+++.. + ..|.||||+|+..|+.++|++||++|++.....
T Consensus 92 ~t~L~~A~~~g~~~iv~~Ll~~g----~~~~~~-----~-~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l 161 (351)
T 3utm_A 92 LVPLHNACSYGHYEVTELLLKHG----ACVNAM-----D-LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAV 161 (351)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----C-TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CcHHHHHHHCCCHHHHHHHHHCC----CCCCCC-----C-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcch
Confidence 48999999999999999999964 333322 2 258999999999999999999999998632100
Q ss_pred ---------------------------------------------------C-------C---C----------cCCCCC
Q 001317 920 ---------------------------------------------------P-------Q---K----------YIFPPN 928 (1102)
Q Consensus 920 ---------------------------------------------------a-------~---~----------ylfdpn 928 (1102)
+ . + +..++|
T Consensus 162 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~ 241 (351)
T 3utm_A 162 DMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN 241 (351)
T ss_dssp HHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTT
T ss_pred HHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcC
Confidence 0 0 0 123788
Q ss_pred CCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCc
Q 001317 929 LAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQ 1004 (1102)
Q Consensus 929 akd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~ 1004 (1102)
.+|..|.||||+|+.. ++.++|++|++. ++++|.+|..|.||||+|+.+|+.++|++|++++++. .+|.
T Consensus 242 ~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~ 314 (351)
T 3utm_A 242 EKNKDFMTPLHVAAER-AHNDVMEVLHKH------GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGF 314 (351)
T ss_dssp CCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CcCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCC
Confidence 8999999999999985 778899999987 5789999999999999999999999999999997765 2577
Q ss_pred eeeeeCcc
Q 001317 1005 VTIPVGVE 1012 (1102)
Q Consensus 1005 v~l~i~~~ 1012 (1102)
.++.+...
T Consensus 315 tal~~a~~ 322 (351)
T 3utm_A 315 TAAQMGNE 322 (351)
T ss_dssp CHHHHSCH
T ss_pred ChhhhhhH
Confidence 77777654
No 60
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.77 E-value=1.4e-18 Score=178.77 Aligned_cols=122 Identities=15% Similarity=0.161 Sum_probs=107.6
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.||+.+ .+++.. +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 125 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga------------~ 182 (253)
T 1yyh_A 125 TTPLILAARLAVEGMLEDLINSH----ADVNAV-----DD-LGKSALHWAAAVNNVDAAVVLLKNGA------------N 182 (253)
T ss_dssp CCHHHHHHHHTCSSHHHHHHHTT----CCTTCB-----CT-TSCBHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred CcHHHHHHHcChHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 48999999999999999999954 334433 22 59999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhh
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL 997 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Ki 997 (1102)
+|.+|..|.||||+|+.. ++.+++++|+++ +|+++.+|..|.||||+|+.+||.+++++|...-
T Consensus 183 ~~~~~~~g~tpL~~A~~~-~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~ 246 (253)
T 1yyh_A 183 KDMQNNREETPLFLAARE-GSYETAKVLLDH------FANRDITDHMDRLPRDIAQERMHHDIVRLLDLEH 246 (253)
T ss_dssp TTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC--
T ss_pred CCCcCCCCCCHHHHHHHC-CCHHHHHHHHHc------CCCccccccCCCCHHHHHHHcCCHHHHHHHHHHh
Confidence 789999999999999985 788899999998 5789999999999999999999999999998653
No 61
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.77 E-value=1.7e-18 Score=174.11 Aligned_cols=137 Identities=18% Similarity=0.154 Sum_probs=114.7
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.. ..+++.. ...|.||||+|+..|+.++|++|+++|+ +
T Consensus 78 ~t~L~~A~~~~~~~~~~~Ll~~~---~~~~~~~------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 136 (237)
T 3b7b_A 78 STCLHLAAKKGHYEVVQYLLSNG---QMDVNCQ------DDGGWTPMIWATEYKHVDLVKLLLSKGS------------D 136 (237)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTT---CCCTTCC------CTTSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CcHHHHHHHcCCHHHHHHHHhCC---CCCcccC------CCCCCCHHHHHHHcCCHHHHHHHHHCCC------------C
Confidence 48999999999999999999853 2333322 2258899999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
++.++..|.||||+|+.. +..+++++|++. ++++|.+|..|.||||+|+..|+.+++++|+++.++. .+
T Consensus 137 ~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 209 (237)
T 3b7b_A 137 INIRDNEENICLHWAAFS-GCVDIAEILLAA------KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKE 209 (237)
T ss_dssp TTCCCTTSCCHHHHHHHH-CCHHHHHHHHTT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT
T ss_pred CCccCCCCCCHHHHHHHC-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCC
Confidence 788999999999999986 778899999987 5689999999999999999999999999999987764 25
Q ss_pred CceeeeeCc
Q 001317 1003 GQVTIPVGV 1011 (1102)
Q Consensus 1003 ~~v~l~i~~ 1011 (1102)
|..++++..
T Consensus 210 g~t~l~~A~ 218 (237)
T 3b7b_A 210 GETPLQCAS 218 (237)
T ss_dssp SCCHHHHSC
T ss_pred CCCHHHHHH
Confidence 666666643
No 62
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.76 E-value=7.2e-19 Score=180.59 Aligned_cols=134 Identities=18% Similarity=0.115 Sum_probs=92.6
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++|+.|+..+..++++.||+.+.+ ++. .. .+.||||+|+..|+.++|++||++|+ +
T Consensus 6 ~t~L~~a~~~~~~~~~~~ll~~g~~--~~~--------~~-~~~t~L~~A~~~g~~~~v~~Ll~~g~------------~ 62 (239)
T 1ycs_B 6 QVSLPPGKRTNLRKTGSERIAHGMR--VKF--------NP-LPLALLLDSSLEGEFDLVQRIIYEVD------------D 62 (239)
T ss_dssp ------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS------------S
T ss_pred cccCchhhhhhhHHHHHHHhccCCC--ccc--------Cc-hhhHHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 4899999999999999999997644 221 11 47899999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
+|.+|..|.||||+||.. |+.++|++|+++ ++++|.+|.+|.||||+|+..|+.+++++|+++.++- .+
T Consensus 63 ~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~ 135 (239)
T 1ycs_B 63 PSLPNDEGITALHNAVCA-GHTEIVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYS 135 (239)
T ss_dssp CCCCCTTSCCHHHHHHHH-TCHHHHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSS
T ss_pred CCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCC
Confidence 789999999999999985 788999999997 5789999999999999999999999999999997765 13
Q ss_pred Cc-eeeeeC
Q 001317 1003 GQ-VTIPVG 1010 (1102)
Q Consensus 1003 ~~-v~l~i~ 1010 (1102)
+. .++.+.
T Consensus 136 ~~~t~l~~a 144 (239)
T 1ycs_B 136 DMQTAADKC 144 (239)
T ss_dssp SCCCHHHHC
T ss_pred CCcchHHHH
Confidence 33 777765
No 63
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.76 E-value=1e-18 Score=176.81 Aligned_cols=143 Identities=17% Similarity=0.090 Sum_probs=118.2
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.+++++||+.+ ++++.. +. .|.||||+|+..|+.++|++|+++|++. .+...
T Consensus 46 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------~~~~~ 109 (236)
T 1ikn_D 46 QTPLHLAVITNQPEIAEALLGAG----CDPELR-----DF-RGNTPLHLACEQGCLASVGVLTQSCTTP------HLHSI 109 (236)
T ss_dssp CCHHHHHHHTTCHHHHHCCCSCC----CCSCCC-----CT-TCCCHHHHHHHHTCHHHHHHHHHSTTTT------SSSCG
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHcCCHHHHHHHHhcccch------hHHHH
Confidence 49999999999999999999853 344433 22 5899999999999999999999998741 11113
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCC-CCCCHHHHHHHcCCHHHHHHHHHhhccc----c
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDA-SGHSPYSYALMKNNHAYNKLVARKLADR----R 1001 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~-~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~ 1001 (1102)
++..+..|.||||+|+.. ++.++|++|++. ++++|.+|. .|.||||+|+..|+.++|++|+++.++. .
T Consensus 110 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~ 182 (236)
T 1ikn_D 110 LKATNYNGHTCLHLASIH-GYLGIVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTY 182 (236)
T ss_dssp GGCCCTTCCCHHHHHHHT-TCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCT
T ss_pred hhccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccC
Confidence 578899999999999985 788999999997 578999998 9999999999999999999999997764 2
Q ss_pred CCceeeeeCcc
Q 001317 1002 NGQVTIPVGVE 1012 (1102)
Q Consensus 1002 ~~~v~l~i~~~ 1012 (1102)
.|..+|.+...
T Consensus 183 ~g~tpl~~A~~ 193 (236)
T 1ikn_D 183 QGYSPYQLTWG 193 (236)
T ss_dssp TCCCGGGGCTT
T ss_pred CCCCHHHHHHc
Confidence 57777766543
No 64
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.76 E-value=2.8e-18 Score=171.94 Aligned_cols=134 Identities=18% Similarity=0.193 Sum_probs=113.9
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.. .+++.. +. .|.||||+|+..|+.++|++|+++|+ +
T Consensus 41 ~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 98 (231)
T 3aji_A 41 RTALHWACSAGHTEIVEFLLQLG----VPVNDK-----DD-AGWSPLHIAASAGXDEIVKALLVKGA------------H 98 (231)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT----CCSCCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCcHHHHHHHHHhC----CCCCCc-----CC-CCCCHHHHHHHcCHHHHHHHHHHcCC------------C
Confidence 48999999999999999999963 333433 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
++.++..|.||||+|+.. +..+++++|++. +++++.+|..|.||||+|+..|+.+++++|+++.++- .+
T Consensus 99 ~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 171 (231)
T 3aji_A 99 VNAVNQNGCTPLHYAASK-NRHEIAVMLLEG------GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTE 171 (231)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT
T ss_pred CCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCC
Confidence 788999999999999985 778899999987 5679999999999999999999999999999986653 23
Q ss_pred Cceeeee
Q 001317 1003 GQVTIPV 1009 (1102)
Q Consensus 1003 ~~v~l~i 1009 (1102)
|..+|.+
T Consensus 172 g~t~L~~ 178 (231)
T 3aji_A 172 GNTPLHL 178 (231)
T ss_dssp SCCHHHH
T ss_pred CCCHHHH
Confidence 5555444
No 65
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.76 E-value=2.8e-18 Score=182.97 Aligned_cols=148 Identities=14% Similarity=0.051 Sum_probs=112.9
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHH-cCCCCC----CCCC-
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIH-YSLTSS----NDTP- 920 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~-~GAd~~----~gsa- 920 (1102)
.++|++|+..|+.++++.|++.+++-++..............|.||||+|+++|+.++|++||+ .|++.+ .|..
T Consensus 126 ~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~ 205 (337)
T 4g8k_A 126 FTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 205 (337)
T ss_dssp CBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCH
T ss_pred CCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcH
Confidence 4899999999999999999997544211111110111122358999999999999999999996 577542 1110
Q ss_pred ----------C----------CcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHH
Q 001317 921 ----------Q----------KYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSY 980 (1102)
Q Consensus 921 ----------~----------~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHy 980 (1102)
. .+..++|.+|..|+||||+||.. +..++|++|+... ++++|++|.+|+||||+
T Consensus 206 l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~-~~~~~v~~Ll~~~-----~~~vn~~d~~G~TpL~~ 279 (337)
T 4g8k_A 206 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK-KHLGLVQRLLEQE-----HIEINDTDSDGKTALLL 279 (337)
T ss_dssp HHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHT-TCHHHHHHHHTST-----TCCTTCBCTTSCBHHHH
T ss_pred HHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHh-hhhHHHHHHHHhc-----CCcccCcCCCCCCHHHH
Confidence 0 01247899999999999999985 7788999998752 57899999999999999
Q ss_pred HHHcCCHHHHHHHHHhhccc
Q 001317 981 ALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 981 Aa~~G~~eiVeLLl~Kia~~ 1000 (1102)
|+++|+.++|++|++++++.
T Consensus 280 A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 280 AVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp HHHTTCHHHHHHHHTTSCSS
T ss_pred HHHcCCHHHHHHHHHCCCCC
Confidence 99999999999999998764
No 66
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.76 E-value=1.8e-18 Score=186.41 Aligned_cols=138 Identities=17% Similarity=0.110 Sum_probs=113.7
Q ss_pred hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCcC
Q 001317 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKM---KCRRMVDLLIHYSLTSSNDTPQKYI 924 (1102)
Q Consensus 848 tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~---gs~~IVeLLL~~GAd~~~gsa~~yl 924 (1102)
.+|+.|+..|....++.||+.. .+++...+.......|.||||+||.. |+.++|++||++|+
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~~g----~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~ga----------- 217 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFANG----QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG----------- 217 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT----CCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSS-----------
T ss_pred HHHhhhhhccCHHHHHHHHhcC----CcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCC-----------
Confidence 6799999999999999999754 33332100000123589999999997 99999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccccCCc
Q 001317 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRRNGQ 1004 (1102)
Q Consensus 925 fdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~~~~~ 1004 (1102)
++|.+|..|.||||+||.. |+.++|++|+++ +|+++++|.+|.||||+|+..|+.+++++|+++.++ .|.
T Consensus 218 -dvn~~d~~G~TpLh~A~~~-g~~~~v~~Ll~~------gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~--~g~ 287 (301)
T 2b0o_E 218 -HLDAKAADGNTALHYAALY-NQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELLEQAQAG--TFA 287 (301)
T ss_dssp -CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH--TTS
T ss_pred -CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC--CCC
Confidence 5789999999999999985 788999999997 578999999999999999999999999999999887 455
Q ss_pred eeeeeC
Q 001317 1005 VTIPVG 1010 (1102)
Q Consensus 1005 v~l~i~ 1010 (1102)
.+|.+.
T Consensus 288 tpLh~A 293 (301)
T 2b0o_E 288 FPLHVD 293 (301)
T ss_dssp SCCC--
T ss_pred ChhHHH
Confidence 556554
No 67
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.76 E-value=2.2e-18 Score=171.96 Aligned_cols=140 Identities=16% Similarity=0.096 Sum_probs=114.6
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.+.+ ++++.. ....|.||||+|+..|+.++|++|+++|+. .+
T Consensus 37 ~t~L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~-----~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----------~~ 99 (228)
T 2dzn_A 37 RIPLHWSVSFQAHEITSFLLSKMEN--VNLDDY-----PDDSGWTPFHIACSVGNLEVVKSLYDRPLK----------PD 99 (228)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTCTT--CCGGGC-----CCTTSCCHHHHHHHHCCHHHHHHHHSSSSC----------CC
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccc--cccccc-----CCCCCCCHHHHHHHcCCHHHHHHHHhCCCC----------cc
Confidence 4899999999999999999996532 222210 122589999999999999999999999842 15
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhh-ccc----c
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKL-ADR----R 1001 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Ki-a~~----~ 1001 (1102)
++.++..|.||||+|+.. +..+++++|++. +++++.+|..|.||||+|+..|+.+++++|+++. ++. .
T Consensus 100 ~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~ 172 (228)
T 2dzn_A 100 LNKITNQGVTCLHLAVGK-KWFEVSQFLIEN------GASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDK 172 (228)
T ss_dssp TTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCT
T ss_pred cccCCcCCCCHHHHHHHc-CCHhHHHHHHHc------CCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCC
Confidence 788999999999999985 788899999997 5679999999999999999999999999999987 432 2
Q ss_pred CCceeeeeC
Q 001317 1002 NGQVTIPVG 1010 (1102)
Q Consensus 1002 ~~~v~l~i~ 1010 (1102)
.|..+|.+.
T Consensus 173 ~g~t~L~~A 181 (228)
T 2dzn_A 173 QGWTPLFHA 181 (228)
T ss_dssp TSCCHHHHH
T ss_pred CCCCHHHHH
Confidence 455555553
No 68
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.76 E-value=4e-18 Score=170.97 Aligned_cols=132 Identities=20% Similarity=0.166 Sum_probs=90.3
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.++++.|++.+...+.+++.. +. .|+||||+|+..|+.++|++|+++|+ +
T Consensus 10 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 71 (241)
T 1k1a_A 10 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-----NN-LRQTPLHLAVITTLPSVVRLLVTAGA------------S 71 (241)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc-----cc-cCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 478899999999999999888765555555543 22 48899999999999999999998887 3
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
++.++..|.||||+|+.. +..+++++|++..... ..+++.+|..|.||||+|+..|+.+++++|+++.++
T Consensus 72 ~~~~~~~g~t~l~~A~~~-~~~~~~~~Ll~~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 141 (241)
T 1k1a_A 72 PMALDRHGQTAAHLACEH-RSPTCLRALLDSAAPG--TLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD 141 (241)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHSCTT--SCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred ccccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCc--cccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 556666666666666663 5556666666552110 124566666666666666666666666666666443
No 69
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.76 E-value=1.8e-18 Score=179.19 Aligned_cols=134 Identities=16% Similarity=0.049 Sum_probs=113.0
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.++ +++.. . .|.||||+|+..|+.++|++||++|+ +
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~------~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 126 (261)
T 2xai_A 70 HTPLFNACVSGSWDCVNLLLQHGA----SVQPE------S-DLASPIHEAARRGHVECVNSLIAYGG------------N 126 (261)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC----CSSCS------C-TTCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHCCC----CCCCC------C-CCCCHHHHHHHcCcHHHHHHHHHcCC------------C
Confidence 489999999999999999998643 22211 1 37899999999999999999999987 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
+|.+|..|.||||+|+.. ++.+++++|++. ++++|. |..|.||||+|+..|+.+++++|+++.++. .+
T Consensus 127 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~ 198 (261)
T 2xai_A 127 IDHKISHLGTPLYLACEN-QQRACVKKLLES------GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAE 198 (261)
T ss_dssp TTCCBTTTBCHHHHHHHT-TCHHHHHHHHHH------TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCcCCCCCCCHHHHHHHh-CCHHHHHHHHHc------CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence 788999999999999985 788999999997 467785 899999999999999999999999997765 36
Q ss_pred CceeeeeCc
Q 001317 1003 GQVTIPVGV 1011 (1102)
Q Consensus 1003 ~~v~l~i~~ 1011 (1102)
|+.++++..
T Consensus 199 g~tpl~~A~ 207 (261)
T 2xai_A 199 GKRPVELVP 207 (261)
T ss_dssp SCCGGGGSC
T ss_pred CCChhhhcc
Confidence 888888865
No 70
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=1.9e-18 Score=197.49 Aligned_cols=131 Identities=18% Similarity=0.105 Sum_probs=110.1
Q ss_pred hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCcC
Q 001317 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVK---MKCRRMVDLLIHYSLTSSNDTPQKYI 924 (1102)
Q Consensus 848 tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~---~gs~~IVeLLL~~GAd~~~gsa~~yl 924 (1102)
..|+.|+..|..++++.||+.+++ ++...+.......|+||||+||+ .|+.++|++||++|+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~----~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga----------- 198 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQD----FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGG----------- 198 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCC----SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSC-----------
T ss_pred HHHHHHHhccCHHHHHHHHhhccc----ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCC-----------
Confidence 579999999999999999996533 33221000112359999999977 999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcccc
Q 001317 925 FPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADRR 1001 (1102)
Q Consensus 925 fdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~~ 1001 (1102)
++|++|..|+||||+||.. |+.++|++|+++ ||++|++|.+|.||||+|+..|+.+++++|+++.++..
T Consensus 199 -~vn~~d~~g~TpLh~A~~~-g~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 267 (497)
T 3lvq_E 199 -HLDAKAADGNTALHYAALY-NQPDCLKLLLKG------RALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTF 267 (497)
T ss_dssp -CTTCCCSSSCCHHHHHTTT-TCHHHHHHHHHT------CCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC---
T ss_pred -CCCccCCCCCcHHHHHHHc-CCHHHHHHHHHc------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCC
Confidence 5899999999999999985 888999999998 67899999999999999999999999999999988763
No 71
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.76 E-value=2e-18 Score=178.91 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=108.2
Q ss_pred hhhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 001317 845 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (1102)
Q Consensus 845 RfktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~yl 924 (1102)
.-.++||+|+.+|+.++++.||+ . .+++.. +. .|+||||+|+..|+.++|++||++|+
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~----~~~~~~-----d~-~g~t~L~~A~~~g~~~~v~~Ll~~ga----------- 101 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-D----RDVDAV-----DE-NGRTALLFVAGLGSDKCVRLLAEAGA----------- 101 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-T----CCTTCB-----CT-TSCBHHHHHHHHTCHHHHHHHHHTTC-----------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-C----CCCCCc-----CC-CCCCHHHHHHHCCCHHHHHHHHHcCC-----------
Confidence 34699999999999999999998 3 233433 22 59999999999999999999999998
Q ss_pred CCCCCCC-CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHH----------------HcCCH
Q 001317 925 FPPNLAG-PGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYAL----------------MKNNH 987 (1102)
Q Consensus 925 fdpnakd-~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa----------------~~G~~ 987 (1102)
++|.++ ..|+||||+|+.. |+.++|++|+++ +|++|++|..|.||||+|+ ..|+.
T Consensus 102 -~~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~ 173 (244)
T 3ui2_A 102 -DLDHRDMRGGLTALHMAAGY-VRPEVVEALVEL------GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE 173 (244)
T ss_dssp -CTTCCCSSSCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHH
T ss_pred -CCCcCCCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChH
Confidence 578888 8899999999985 788999999998 5789999999999999988 67999
Q ss_pred HHHHHHHHhhcc
Q 001317 988 AYNKLVARKLAD 999 (1102)
Q Consensus 988 eiVeLLl~Kia~ 999 (1102)
+++++|+++..+
T Consensus 174 ~iv~~L~~~~~~ 185 (244)
T 3ui2_A 174 KVINVLEGQVFE 185 (244)
T ss_dssp HHHHHHHHHHEE
T ss_pred HHHHHHHHhccc
Confidence 999999987554
No 72
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.75 E-value=3.4e-18 Score=167.77 Aligned_cols=127 Identities=17% Similarity=0.038 Sum_probs=104.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.++++.||+.+ .+++.. ...|.||||+|+..|+.++|++||+++.. +
T Consensus 40 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~------~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-----------~ 98 (201)
T 3hra_A 40 NTPLNIAVHNNDIEIAKALIDRG----ADINLQ------NSISDSPYLYAGAQGRTEILAYMLKHATP-----------D 98 (201)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT----CCTTCC------CTTSCCHHHHHHHTTCHHHHHHHHHHSCC-----------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC----CCCCCC------CCCCCCHHHHHHHcCCHHHHHHHHhccCc-----------c
Confidence 48999999999999999999864 333322 22588999999999999999999955431 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCC-----HHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNN-----HAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~-----~eiVeLLl~Kia~~ 1000 (1102)
++.++..|.||||+|+.. ++.+++++|++. | .+++|.+|..|.||||+|+..|+ .+++++|+++.++-
T Consensus 99 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~----g-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~ 171 (201)
T 3hra_A 99 LNKHNRYGGNALIPAAEK-GHIDNVKLLLED----G-REDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171 (201)
T ss_dssp TTCCCTTSCCSHHHHHHT-TCHHHHHHHHHH----C-CCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCT
T ss_pred cccccCCCCcHHHHHHHc-CCHHHHHHHHHc----C-CCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCC
Confidence 788899999999999985 778899999987 2 26789999999999999999888 89999999987654
No 73
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=6.8e-18 Score=171.73 Aligned_cols=126 Identities=22% Similarity=0.211 Sum_probs=110.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++|++|+.+|..++++.|++.. .+++.. ....|.||||+|+..|+.++|++||++|+ +
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~ 64 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLLEGG----ANVNFQ-----EEEGGWTPLHNAVQMSREDIVELLLRHGA------------D 64 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTT----CCTTCC-----CTTTCCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred chHHHHHHHcCCHHHHHHHHHcC----CCcccc-----cCCCCCcHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 48999999999999999999964 333322 12358999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++.+|..|.||||+|+.. ++.+++++|+++ +++++.+|..|.||||+|+..|+.+++++|+++.++-
T Consensus 65 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 131 (285)
T 1wdy_A 65 PVLRKKNGATPFLLAAIA-GSVKLLKLFLSK------GADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANV 131 (285)
T ss_dssp TTCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CcccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCc
Confidence 788999999999999985 788999999997 5679999999999999999999999999999986653
No 74
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.75 E-value=1.4e-18 Score=187.27 Aligned_cols=151 Identities=15% Similarity=0.126 Sum_probs=118.7
Q ss_pred hhhHHHHHHhcCcchhHHHHHHHHHhccccCCC------------CChHHHhhhcCchHHHHHHHcC--CHHHHHHHHHc
Q 001317 846 FKFLLVFSVDRGCCALVKAILDILVEGNLSMDG------------LSRESLEMLWEIQLLNRAVKMK--CRRMVDLLIHY 911 (1102)
Q Consensus 846 fktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~------------~s~e~~~~~~g~TlLH~AV~~g--s~~IVeLLL~~ 911 (1102)
-.++||+|+.+|+.+++++||+...+.+.+.+. .... .....|.||||+|+..| +.++|++||++
T Consensus 84 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ 162 (364)
T 3ljn_A 84 GQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSH-VKHCKGQTALHWCVGLGPEYLEMIKILVQL 162 (364)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTE-EEEESCCCHHHHHHHSCGGGHHHHHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccc-cCCCCCCCHHHHHHHcCCchHHHHHHHHHc
Confidence 358999999999999999999985442222110 0000 01225899999999999 99999999999
Q ss_pred CCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHH
Q 001317 912 SLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNK 991 (1102)
Q Consensus 912 GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVe 991 (1102)
|+ ++|.+|..|.||||+|+.. |+.++|++|++.+... .+.++|.+|..|.||||+|+..|+.++|+
T Consensus 163 ga------------~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~g~~~-~~~~~~~~~~~g~t~L~~A~~~g~~~~v~ 228 (364)
T 3ljn_A 163 GA------------SPTAKDKADETPLMRAMEF-RNREALDLMMDTVPSK-SSLRLDYANKQGNSHLHWAILINWEDVAM 228 (364)
T ss_dssp TC------------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHHCSCS-SSCCTTCCCTTCCCTTHHHHTTTCHHHHH
T ss_pred CC------------CCcccCCCCCCHHHHHHHc-CCHHHHHHHHhccccc-ccccccccCCCCCcHHHHHHHcCCHHHHH
Confidence 98 5789999999999999985 7889999999872210 02339999999999999999999999999
Q ss_pred HHHHhhccc----cCCceeeeeCc
Q 001317 992 LVARKLADR----RNGQVTIPVGV 1011 (1102)
Q Consensus 992 LLl~Kia~~----~~~~v~l~i~~ 1011 (1102)
+|+++.++- ..|..+|.+..
T Consensus 229 ~Ll~~gad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 229 RFVEMGIDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp HHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHcCCCCCCCCCCCCCHHHHHH
Confidence 999997765 25667766654
No 75
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.75 E-value=1.7e-18 Score=183.03 Aligned_cols=123 Identities=14% Similarity=0.137 Sum_probs=107.3
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.||+.+++ ++.. .|+||||+|+..|+.++|++||++|+ +
T Consensus 32 ~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~--------~g~t~L~~A~~~g~~~~v~~Ll~~ga------------~ 87 (285)
T 3kea_A 32 HSASYYAIADNNVRLVCTLLNAGAL----KNLL--------ENEFPLHQAATLEDTKIVKILLFSGL------------D 87 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTGG----GSCC--------TTCCHHHHHTTSSSCHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCC----CCCC--------CCCCHHHHHHHcCCHHHHHHHHHCCC------------C
Confidence 4899999999999999999996433 3322 48999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCC-CCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASG-HSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G-~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.+|..|+||||+|+.. ++.++|++|+++ +++++.+|..| .||||+|+..|+.+++++|+++.++.
T Consensus 88 ~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~ 155 (285)
T 3kea_A 88 DSQFDDKGNTALYYAVDS-GNMQTVKLFVKK------NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST 155 (285)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHH------CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT
T ss_pred CCCcCCCCCcHHHHHHHc-CCHHHHHHHHhc------CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc
Confidence 788999999999999985 788899999987 57899999999 79999999999999999999987655
No 76
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.75 E-value=5.3e-19 Score=186.89 Aligned_cols=116 Identities=18% Similarity=0.159 Sum_probs=101.1
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++|++|+..++.++++.||+.+ ++++.. +. .|+||||+||+.|+.++|++||++|+ +
T Consensus 120 ~t~l~~a~~~~~~~~~~~Ll~~g----~~~n~~-----d~-~g~TpL~~A~~~g~~~~v~~Ll~~ga------------d 177 (269)
T 4b93_B 120 AVPLHLACQQGHFQVVKCLLDSN----AKPNKK-----DL-SGNTPLIYACSGGHHELVALLLQHGA------------S 177 (269)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT----CCSCCC-----CT-TCCCHHHHHHHTTCGGGHHHHHHTTC------------C
T ss_pred CCccccccccChHHHHHHHHHCC----CCCCCC-----CC-CCCCHHHHHHHCCCHHHHHHHHHCCC------------C
Confidence 48999999999999999999954 444433 22 59999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHH
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLV 993 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLL 993 (1102)
+|.++..|.||||+||.. |+.++|++|+++ ||++|++|.+|+||||||+++|+ ++++|
T Consensus 178 vn~~~~~g~t~Lh~A~~~-g~~~~v~~Ll~~------Gad~~~~d~~G~TpL~~A~~~~~--i~~lL 235 (269)
T 4b93_B 178 INASNNKGNTALHEAVIE-KHVFVVELLLLH------GASVQVLNKRQRTAVDCAEQNSK--IMELL 235 (269)
T ss_dssp TTCBCTTSCBHHHHHHHT-TCHHHHHHHHHT------TCCSCCCCTTSCCSGGGSCTTCH--HHHHT
T ss_pred CCccccCCCcHHHHHHHc-CCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHhCCc--HHHHH
Confidence 899999999999999985 788999999998 57899999999999999998775 55554
No 77
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.74 E-value=2.9e-18 Score=188.79 Aligned_cols=136 Identities=16% Similarity=0.144 Sum_probs=100.4
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.+++++|++...+ .+.. ...|.||||+|++.|+.++|++|+++|+ +
T Consensus 246 ~t~L~~A~~~g~~~~v~~Ll~~~~~----~~~~------~~~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 303 (437)
T 1n11_A 246 VTPLHLAAQEGHAEMVALLLSKQAN----GNLG------NKSGLTPLHLVAQEGHVPVADVLIKHGV------------M 303 (437)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTTTCC----TTCC------CTTCCCHHHHHHHHTCHHHHHHHHHHTC------------C
T ss_pred CCHHHHHHHCCCHHHHHHHHhcCCC----CCCC------CCCCCCHHHHHHHcCCHHHHHHHHhCCc------------c
Confidence 3788888888888888888775322 2211 1247788888888888888888888877 4
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
+|.++..|.||||+|+.. |+.++|++|+++ ++++|.+|..|.||||+|+.+|+.++|++|++++++. .+
T Consensus 304 ~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~ 376 (437)
T 1n11_A 304 VDATTRMGYTPLHVASHY-GNIKLVKFLLQH------QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSD 376 (437)
T ss_dssp TTCCCSSCCCHHHHHHHS-SCSHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSS
T ss_pred CCCCCCCCCCHHHHHHHc-CcHHHHHHHHhc------CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCC
Confidence 677888888888888875 666788888876 5678888888888888888888888888888876654 24
Q ss_pred CceeeeeCc
Q 001317 1003 GQVTIPVGV 1011 (1102)
Q Consensus 1003 ~~v~l~i~~ 1011 (1102)
|..++++..
T Consensus 377 g~t~l~~A~ 385 (437)
T 1n11_A 377 GTTPLAIAK 385 (437)
T ss_dssp SCCHHHHHH
T ss_pred CCCHHHHHH
Confidence 666666543
No 78
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.74 E-value=9.8e-18 Score=178.74 Aligned_cols=140 Identities=18% Similarity=0.083 Sum_probs=106.9
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCC------
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTP------ 920 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa------ 920 (1102)
.++|+.|+.+|+.++|++||+.++ +++.. +...|+||||+||+.|+.+||++||++|++......
T Consensus 26 ~t~L~~Av~~g~~~~V~~LL~~Ga----dvn~~-----~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~ 96 (337)
T 4g8k_A 26 NHLLIKAVQNEDVDLVQQLLEGGA----NVNFQ-----EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPF 96 (337)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTC----CTTCC-----CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred ChHHHHHHHcCCHHHHHHHHHCCC----CCCcc-----CCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchh
Confidence 489999999999999999999753 34422 233589999999999999999999999996421111
Q ss_pred ---------------CCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCC----CCCCcCCCCCCCCHHHHH
Q 001317 921 ---------------QKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGP----SSWNSILDASGHSPYSYA 981 (1102)
Q Consensus 921 ---------------~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGa----gA~vNarD~~G~TPLHyA 981 (1102)
..+..++|.+|..|.||||+|+.. +..+++++|++++..+.. ..+.+..|..|.||||+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~-~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A 175 (337)
T 4g8k_A 97 ILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY-GKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 175 (337)
T ss_dssp HHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHT-TCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHH
T ss_pred HHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHc-CcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHH
Confidence 011347899999999999999985 788899999987322110 112234566799999999
Q ss_pred HHcCCHHHHHHHHHh
Q 001317 982 LMKNNHAYNKLVARK 996 (1102)
Q Consensus 982 a~~G~~eiVeLLl~K 996 (1102)
+.+|+.++|++|+++
T Consensus 176 ~~~g~~~~v~~LL~~ 190 (337)
T 4g8k_A 176 AEKGHVEVLKILLDE 190 (337)
T ss_dssp HHHTCHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhc
Confidence 999999999999965
No 79
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.74 E-value=9.7e-18 Score=170.57 Aligned_cols=127 Identities=18% Similarity=0.190 Sum_probs=111.2
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCC----HHHHHHHHHcCCCCCCCCCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC----RRMVDLLIHYSLTSSNDTPQK 922 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs----~~IVeLLL~~GAd~~~gsa~~ 922 (1102)
.++||+|+.+|+.++++.|++. .+.+++.. +. .|.||||+|+..++ .+++++|+++|+
T Consensus 149 ~t~L~~A~~~~~~~~v~~Ll~~---~~~~~~~~-----~~-~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~--------- 210 (285)
T 1wdy_A 149 ATALMDAAEKGHVEVLKILLDE---MGADVNAC-----DN-MGRNALIHALLSSDDSDVEAITHLLLDHGA--------- 210 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT---SCCCTTCC-----CT-TSCCHHHHHHHCSCTTTHHHHHHHHHHTTC---------
T ss_pred CcHHHHHHHcCCHHHHHHHHHh---cCCCCCcc-----CC-CCCCHHHHHHHccccchHHHHHHHHHHcCC---------
Confidence 4899999999999999999985 13444433 22 58999999999999 999999999998
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 923 YIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 923 ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++|.+|..|.||||+|+.. ++.+++++|++.. ++++|.+|..|.||||+|+.+|+.+++++|++++++.
T Consensus 211 ---~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~-----g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 211 ---DVNVRGERGKTPLILAVEK-KHLGLVQRLLEQE-----HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279 (285)
T ss_dssp ---CSSCCCTTSCCHHHHHHHT-TCHHHHHHHHHSS-----SCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred ---CCCCcCCCCCcHHHHHHHc-CCHHHHHHHHhcc-----CCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 5789999999999999985 7888999999831 5689999999999999999999999999999998875
No 80
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.74 E-value=7.8e-18 Score=175.04 Aligned_cols=105 Identities=19% Similarity=0.215 Sum_probs=85.4
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++|++|+..|+.++|+.||+.+ .+++.. +. .|.||||+||..|+.++|++||++|+ +
T Consensus 41 ~t~l~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga------------~ 98 (299)
T 1s70_B 41 GAVFLAACSSGDTEEVLRLLERG----ADINYA-----NV-DGLTALHQACIDDNVDMVKFLVENGA------------N 98 (299)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHC----CCTTCB-----CT-TCCBHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred ccHHHHHHHcCCHHHHHHHHHcC----CCCccc-----CC-CCCCHHHHHHHcCCHHHHHHHHHCCC------------C
Confidence 48999999999999999999964 334433 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHH
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSY 980 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHy 980 (1102)
+|.+|..|+||||+|+.. |+.++|++|+++ +++++.+|.+|.||||+
T Consensus 99 ~~~~~~~g~tpL~~A~~~-g~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~ 145 (299)
T 1s70_B 99 INQPDNEGWIPLHAAASC-GYLDIAEYLISQ------GAHVGAVNSEGDTPLDI 145 (299)
T ss_dssp TTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHH
T ss_pred CCCCCCCCCcHHHHHHHc-CCHHHHHHHHhC------CCCCCCcCCCCCCHHHH
Confidence 788999999999999986 788899999997 34566666544433333
No 81
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.74 E-value=8e-18 Score=176.72 Aligned_cols=126 Identities=21% Similarity=0.194 Sum_probs=110.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++|+.|+..|..+.++.||.. .+++++.. +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~---~~~~~~~~-----d~-~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~ 83 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTP---LNVNCHAS-----DG-RKSTPLHLAAGYNRVRIVQLLLQHGA------------D 83 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCT---TTTTCCCS-----ST-TCCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred chhHHHHHHcCCHHHHHHHHHh---cCCCcccC-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 4899999999999999998874 23443433 22 58999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+|.+|..|.||||+|+.. |+.+||++|+++ +++++.+|..|.||||+|+..|+.+++++|+++.++-
T Consensus 84 ~~~~~~~g~t~L~~A~~~-g~~~iv~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 150 (351)
T 3utm_A 84 VHAKDKGGLVPLHNACSY-GHYEVTELLLKH------GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADP 150 (351)
T ss_dssp TTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred CCccCCCCCcHHHHHHHC-CCHHHHHHHHHC------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 789999999999999985 788999999998 5679999999999999999999999999999987664
No 82
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.74 E-value=1.2e-17 Score=173.10 Aligned_cols=72 Identities=15% Similarity=0.058 Sum_probs=47.3
Q ss_pred CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc---cCCceeee
Q 001317 932 PGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR---RNGQVTIP 1008 (1102)
Q Consensus 932 ~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~---~~~~v~l~ 1008 (1102)
..|.||||+|+.. ++.+++++|++. ++++|.+|.+|.||||+|+..|+.+++++|+++.++. .+|..+|.
T Consensus 99 ~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~Lh 171 (261)
T 2xai_A 99 SDLASPIHEAARR-GHVECVNSLIAY------GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLH 171 (261)
T ss_dssp CTTCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTCCBTTBCHHH
T ss_pred CCCCCHHHHHHHc-CcHHHHHHHHHc------CCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCChHH
Confidence 3467777777763 566677777765 4567777777777777777777777777777775543 24555544
Q ss_pred eC
Q 001317 1009 VG 1010 (1102)
Q Consensus 1009 i~ 1010 (1102)
+.
T Consensus 172 ~A 173 (261)
T 2xai_A 172 AV 173 (261)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 83
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.73 E-value=8.3e-18 Score=177.35 Aligned_cols=134 Identities=16% Similarity=0.056 Sum_probs=110.6
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++... +++.. . .|.||||+|+..|+.++|++||++|+ +
T Consensus 126 ~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~------~-~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~ 182 (285)
T 3d9h_A 126 HTPLFNACVSGSWDCVNLLLQHGA----SVQPE------S-DLASPIHEAARRGHVECVNSLIAYGG------------N 182 (285)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTC----CSSCS------C-TTSCHHHHHHHHTCHHHHHHHHHTTC------------C
T ss_pred CCHHHHHHHcCHHHHHHHHHHCCC----CCCCC------C-CCCCHHHHHHHcCCHHHHHHHHHCCC------------C
Confidence 489999999999999999988543 22211 1 37899999999999999999999987 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RN 1002 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~ 1002 (1102)
+|.+|..|.||||+|+.. ++.++|++|++. ++++|. |..|.||||+|+..|+.+++++|+++.++. .+
T Consensus 183 ~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~ 254 (285)
T 3d9h_A 183 IDHKISHLGTPLYLACEN-QQRACVKKLLES------GADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAE 254 (285)
T ss_dssp TTCCBTTTBCHHHHHHHT-TCHHHHHHHHHT------TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred CCCcCCCCCCHHHHHHHc-CcHHHHHHHHHC------CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 788999999999999985 788899999987 456774 889999999999999999999999997664 35
Q ss_pred CceeeeeCc
Q 001317 1003 GQVTIPVGV 1011 (1102)
Q Consensus 1003 ~~v~l~i~~ 1011 (1102)
|+.+|++..
T Consensus 255 g~t~l~~A~ 263 (285)
T 3d9h_A 255 GKRPVELVP 263 (285)
T ss_dssp SCCGGGGSC
T ss_pred CCCHHHHhc
Confidence 777777764
No 84
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.73 E-value=4.7e-18 Score=186.12 Aligned_cols=131 Identities=18% Similarity=0.161 Sum_probs=108.6
Q ss_pred hhHHHHHHhcC---cchhHHHHHHHHHhccccCCCCChH--HHhhhcCchHHHHHHHcCCHHHHHHHHHcC-CCCCCCCC
Q 001317 847 KFLLVFSVDRG---CCALVKAILDILVEGNLSMDGLSRE--SLEMLWEIQLLNRAVKMKCRRMVDLLIHYS-LTSSNDTP 920 (1102)
Q Consensus 847 ktLL~FAadrG---wcaVVK~LLd~L~~g~v~i~~~s~e--~~~~~~g~TlLH~AV~~gs~~IVeLLL~~G-Ad~~~gsa 920 (1102)
.++||+|+.++ ..+++++|++.+++ ++..... ......|.||||+|+..|+.++|++||+++ +
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~----~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~------- 304 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAK----VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGS------- 304 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCC----SSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCC-------
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCC----cccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCC-------
Confidence 48999999988 89999999997544 2211000 001225899999999999999999999886 5
Q ss_pred CCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 921 QKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 921 ~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++|.+|..|.||||+||.. |+.+||++|+++ +|++|++|..|.||||+|+.+||.++|++|+++.+++
T Consensus 305 -----~~n~~d~~g~TpL~~A~~~-g~~~iv~~Ll~~------gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 305 -----NKDKQDEDGKTPIMLAAQE-GRIEVVMYLIQQ------GASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp -----CTTCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred -----CccCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 5799999999999999995 788999999998 5789999999999999999999999999999987664
No 85
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.73 E-value=1.1e-17 Score=154.12 Aligned_cols=104 Identities=21% Similarity=0.120 Sum_probs=92.2
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.+.|+||+|++.|+.++|++||++|+ ++|.+|..|+||||+|+.. ++.+++++|++. ++++
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~------------~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~ 66 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGE------------DVNRTLEGGRKPLHYAADC-GQLEILEFLLLK------GADI 66 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTC------------CTTSCCTTSSCHHHHHHHT-TCHHHHHHHHTT------TCCT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCC------------CcCccCCCCCcHHHHHHHc-CCHHHHHHHHHc------CCCC
Confidence 47899999999999999999999998 5789999999999999985 788999999987 5789
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeC
Q 001317 968 SILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVG 1010 (1102)
Q Consensus 968 NarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~ 1010 (1102)
|.+|..|.||||+|+..|+.+++++|+++.++. ..|..++.+.
T Consensus 67 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 67 NAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 999999999999999999999999999987654 2566666665
No 86
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.73 E-value=2.5e-17 Score=165.67 Aligned_cols=125 Identities=20% Similarity=0.172 Sum_probs=90.2
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|..++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++|+++|+ +
T Consensus 12 ~t~L~~A~~~g~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~ 69 (237)
T 3b7b_A 12 RSPLHAAAEAGHVDICHMLVQAG----ANIDTC-----SE-DQRTPLMEAAENNHLEAVKYLIKAGA------------L 69 (237)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHTTTC------------C
T ss_pred CCHHHHHHHcCcHHHHHHHHHcC----CCcCcc-----CC-CCCCHHHHHHHhCCHHHHHHHHhCCC------------C
Confidence 48899999999999999998853 333332 12 48899999999999999999998887 3
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
++.++..|.||||+|+.. +..+++++|++. | .++++.+|..|.||||+|+..|+.+++++|+++.++
T Consensus 70 ~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~----~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 136 (237)
T 3b7b_A 70 VDPKDAEGSTCLHLAAKK-GHYEVVQYLLSN----G-QMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD 136 (237)
T ss_dssp CCCCCTTSCCHHHHHHHT-TCHHHHHHHHTT----T-CCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCCCCCCcHHHHHHHc-CCHHHHHHHHhC----C-CCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC
Confidence 566666777777777763 566677777765 2 145666777777777777777777777777766544
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.73 E-value=1.1e-17 Score=156.51 Aligned_cols=106 Identities=21% Similarity=0.160 Sum_probs=94.9
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|+||||+|+..|+.++|++||++|+ ++|.+|..|.||||+|+.. ++.+++++|+++ ++++
T Consensus 9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~ 69 (137)
T 3c5r_A 9 RGETLLHIASIKGDIPSVEYLLQNGS------------DPNVKDHAGWTPLHEACNH-GHLKVVELLLQH------KALV 69 (137)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTC------------CSCCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC------------CCCcCCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCcc
Confidence 59999999999999999999999998 5788999999999999985 788999999997 5679
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeCcc
Q 001317 968 SILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVGVE 1012 (1102)
Q Consensus 968 NarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~~~ 1012 (1102)
+.+|..|.||||+|+..|+.+++++|+++.++. .+|..++++...
T Consensus 70 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 70 NTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp TCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCC
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 999999999999999999999999999987665 367777777654
No 88
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.73 E-value=3.2e-17 Score=163.12 Aligned_cols=125 Identities=17% Similarity=0.157 Sum_probs=91.3
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++|++|+.+|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.+++++|+++|+ +
T Consensus 77 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~~~~-----~~-~g~t~l~~A~~~~~~~~~~~Ll~~~~------------~ 134 (240)
T 3eu9_A 77 STPLHWATRQGHLSMVVQLMKYG----ADPSLI-----DG-EGCSCIHLAAQFGHTSIVAYLIAKGQ------------D 134 (240)
T ss_dssp BCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CChhHHHHHcCCHHHHHHHHHcC----CCCccc-----CC-CCCCHHHHHHHcCHHHHHHHHHhcCC------------C
Confidence 48999999999999999999853 333322 22 58899999999999999999999988 3
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCC-CCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDA-SGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~-~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
++.++..|.||||+|+..++..+++++|+.. +++++..|. .|.||||+|+..|+.+++++|+++.++
T Consensus 135 ~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~------~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 202 (240)
T 3eu9_A 135 VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF------NVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN 202 (240)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT------TCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC
T ss_pred ccccCCCCCcHHHHHHHhCChHHHHHHHHhc------CCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC
Confidence 5666667777777777554445666777665 345666665 677777777777777777777766544
No 89
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.73 E-value=2.5e-18 Score=185.33 Aligned_cols=143 Identities=16% Similarity=0.032 Sum_probs=114.3
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCC---HHHHHHHHHcCCCCCCCCCCCc
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKC---RRMVDLLIHYSLTSSNDTPQKY 923 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs---~~IVeLLL~~GAd~~~gsa~~y 923 (1102)
++|||+|+.+|+.++|++||+.+ ++++.. +. .|+||||+|+..|+ .++|+.||+++..
T Consensus 132 ~TpLh~Aa~~g~~~~v~~Ll~~G----ad~n~~-----d~-~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~--------- 192 (327)
T 1sw6_A 132 NTPLHWLTSIANLELVKHLVKHG----SNRLYG-----DN-MGESCLVKAVKSVNNYDSGTFEALLDYLYP--------- 192 (327)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----CCTTBC-----CT-TCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---------
T ss_pred CcHHHHHHHcCCHHHHHHHHHcC----CCCCCc-----CC-CCCCHHHHHHHhcccccHHHHHHHHHhhhc---------
Confidence 49999999999999999999964 444433 22 59999999999999 7899999998741
Q ss_pred CCCCCCCCCCCChHHHHHHhc---CCcHHHHHHHhCCCCCC----------------CCC--------------------
Q 001317 924 IFPPNLAGPGGITPLHLAACT---SDSDDIIDALTNDPQEI----------------GPS-------------------- 964 (1102)
Q Consensus 924 lfdpnakd~~G~TPLHiAA~~---~g~eeVVeLLL~~p~~i----------------Gag-------------------- 964 (1102)
++|.+|..|+||||+|+.. .++.+++++|++....+ |+.
T Consensus 193 --~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~ 270 (327)
T 1sw6_A 193 --CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKW 270 (327)
T ss_dssp --GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHH
T ss_pred --cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHH
Confidence 4789999999999999972 37788999998641000 000
Q ss_pred ---CCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeC
Q 001317 965 ---SWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVG 1010 (1102)
Q Consensus 965 ---A~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~ 1010 (1102)
.++|.+|.+|.||||+|+.+|+.++|++|+++.++. .+|..+|.+.
T Consensus 271 Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 271 IIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323 (327)
T ss_dssp HHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred HHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 048999999999999999999999999999997765 3677777764
No 90
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.72 E-value=2.6e-17 Score=183.84 Aligned_cols=126 Identities=15% Similarity=0.083 Sum_probs=109.4
Q ss_pred hhHHHHHHhc-CcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCC
Q 001317 847 KFLLVFSVDR-GCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIF 925 (1102)
Q Consensus 847 ktLL~FAadr-GwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylf 925 (1102)
.++||+|+.. |..++++.||+.+ ++++.... ...|.||||+||..|+.++|++||++|+
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~G----advn~~~~----~~~g~TpLh~Aa~~g~~~iv~~LL~~Ga------------ 259 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAHG----ADVNWVNG----GQDNATPLIQATAANSLLACEFLLQNGA------------ 259 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHTT----CCTTCCCT----TTTCCCHHHHHHHTTCHHHHHHHHHTTC------------
T ss_pred CcHHHHHHHccCCHHHHHHHHHcC----CCCCcccc----ccCCCCHHHHHHHCCCHHHHHHHHHcCC------------
Confidence 3699999999 9999999999854 34443310 1358999999999999999999999998
Q ss_pred CCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 926 PPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 926 dpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
++|.+|..|.||||+|+.. ++.++|++|+++ +|+++++|.+|.||||+|+..|+.+++++|+.....
T Consensus 260 dvn~~d~~G~TpLh~A~~~-g~~~~v~~LL~~------Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 260 NVNQADSAGRGPLHHATIL-GHTGLACLFLKR------GADLGARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CCCCCCCCCCCHHHHHHHc-CcHHHHHHHHHC------cCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 5799999999999999986 788999999998 578999999999999999999999999999877543
No 91
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.71 E-value=3.1e-17 Score=172.96 Aligned_cols=134 Identities=16% Similarity=0.038 Sum_probs=110.0
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+..|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++||++|++
T Consensus 93 ~t~L~~A~~~g~~~~v~~Ll~~g----a~~~~~-----~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 150 (285)
T 3d9h_A 93 VSPLHEACLGGHLSCVKILLKHG----AQVNGV-----TA-DWHTPLFNACVSGSWDCVNLLLQHGAS------------ 150 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT----CCSSCC-----CT-TCCCHHHHHHHHTCHHHHHHHHHTTCC------------
T ss_pred CCHHHHHHHCCcHHHHHHHHHCC----CCCCCC-----CC-CCCCHHHHHHHcCHHHHHHHHHHCCCC------------
Confidence 48999999999999999999963 333432 22 589999999999999999999999983
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc---cCC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR---RNG 1003 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~---~~~ 1003 (1102)
++. +..|.||||+|+.. |..+++++|++. +++++.+|.+|.||||+|+..|+.+++++|+++.++. ..|
T Consensus 151 ~~~-~~~g~t~L~~A~~~-g~~~~v~~Ll~~------g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g 222 (285)
T 3d9h_A 151 VQP-ESDLASPIHEAARR-GHVECVNSLIAY------GGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQ 222 (285)
T ss_dssp SSC-SCTTSCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTT
T ss_pred CCC-CCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCC
Confidence 343 34599999999985 778899999987 5679999999999999999999999999999986654 245
Q ss_pred ceeeeeC
Q 001317 1004 QVTIPVG 1010 (1102)
Q Consensus 1004 ~v~l~i~ 1010 (1102)
..+|.+.
T Consensus 223 ~t~L~~A 229 (285)
T 3d9h_A 223 DSPLHAV 229 (285)
T ss_dssp BCHHHHH
T ss_pred CCHHHHH
Confidence 5554443
No 92
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.71 E-value=2.7e-17 Score=181.12 Aligned_cols=65 Identities=28% Similarity=0.358 Sum_probs=32.9
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLA 998 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia 998 (1102)
+|.++..|.||||+||.. |+.++|+.|++. +++++..|..|.||||+|+..|+.+++++|+++.+
T Consensus 106 ~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 170 (437)
T 1n11_A 106 PNLATTAGHTPLHIAARE-GHVETVLALLEK------EASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA 170 (437)
T ss_dssp TTCCCTTCCCHHHHHHHH-TCHHHHHHHHHT------TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCCcHHHHHHHc-CCHHHHHHHHhC------CCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 444555555555555543 444455555544 23344555555555555555555555555555433
No 93
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.71 E-value=4e-18 Score=171.81 Aligned_cols=136 Identities=8% Similarity=-0.012 Sum_probs=110.4
Q ss_pred hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCc
Q 001317 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCR----RMVDLLIHYSLTSSNDTPQKY 923 (1102)
Q Consensus 848 tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~----~IVeLLL~~GAd~~~gsa~~y 923 (1102)
..|+.|+..|..+.++.|+... + +. .+...|+||||+|+.+|+. +||++||++|+
T Consensus 8 ~~l~~Aa~~g~~~~~~~l~~~~----~--~~-----~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga---------- 66 (186)
T 3t8k_A 8 RTVSAAAMLGTYEDFLELFEKG----Y--ED-----KESVLKSNILYDVLRNNNDEARYKISMFLINKGA---------- 66 (186)
T ss_dssp SSHHHHHHHSCHHHHHHHHHHS----S--SC-----HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTC----------
T ss_pred cHHHHHHHcCCHHHHHHHHhcC----c--cc-----ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCC----------
Confidence 5688999999999999888742 1 21 2323599999999999985 59999999999
Q ss_pred CCCCCCCCCCCChHHHHHHhcCCc-----HHHHHHHhCCCCCCCCCCCCcCCCCCCC-CHHHHHHHcC-----CHHHHHH
Q 001317 924 IFPPNLAGPGGITPLHLAACTSDS-----DDIIDALTNDPQEIGPSSWNSILDASGH-SPYSYALMKN-----NHAYNKL 992 (1102)
Q Consensus 924 lfdpnakd~~G~TPLHiAA~~~g~-----eeVVeLLL~~p~~iGagA~vNarD~~G~-TPLHyAa~~G-----~~eiVeL 992 (1102)
+||++|..|+||||+|+..+.. .+++++|+++ ||++|++|..|. ||||||+..| +.+++++
T Consensus 67 --dvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~------Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~ 138 (186)
T 3t8k_A 67 --DIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK------GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKL 138 (186)
T ss_dssp --CSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT------TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHH
T ss_pred --CCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC------CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHH
Confidence 5899999999999999986421 4689999998 678999999999 9999999954 4569999
Q ss_pred HHH-hhccc----cCCceeeeeCcc
Q 001317 993 VAR-KLADR----RNGQVTIPVGVE 1012 (1102)
Q Consensus 993 Ll~-Kia~~----~~~~v~l~i~~~ 1012 (1102)
|++ +.++. ..|..+|++...
T Consensus 139 Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 139 IFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred HHHhcCCCCcccCCCCCCHHHHHHH
Confidence 998 76665 357777777544
No 94
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.70 E-value=2e-17 Score=150.26 Aligned_cols=94 Identities=27% Similarity=0.226 Sum_probs=87.1
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|.||||+||..|+.++|++||++|+ ++|.+|..|.||||+|+.. +..+++++|++. ++++
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~~~~~d~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~ 68 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSKGA------------DVNARSKDGNTPLHLAAKN-GHAEIVKLLLAK------GADV 68 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTTTC------------CSSCCCSSSCCTTHHHHTT-TCHHHHHHHTTT------TCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCC------------CCCCcCCCCCCHHHHHHHc-CcHHHHHHHHHc------CCCC
Confidence 58999999999999999999999998 5788999999999999985 788999999997 5679
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 968 SILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 968 NarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+.+|..|.||||+|+..|+.+++++|+++.++-
T Consensus 69 ~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 101 (115)
T 2l6b_A 69 NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101 (115)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSH
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC
Confidence 999999999999999999999999999987764
No 95
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.70 E-value=1.2e-17 Score=156.69 Aligned_cols=93 Identities=16% Similarity=0.032 Sum_probs=86.2
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|.||||+|++.|+.++|++||++|+ ++|.+|..|+||||+|+. ++.+++++|+++ ++++
T Consensus 11 ~g~t~L~~A~~~~~~~~v~~Ll~~g~------------~~~~~~~~g~t~L~~A~~--~~~~~v~~Ll~~------g~~~ 70 (136)
T 1d9s_A 11 SSDAGLATAAARGQVETVRQLLEAGA------------DPNALNRFGRRPIQVMMM--GSAQVAELLLLH------GAEP 70 (136)
T ss_dssp CCSCHHHHHHHTTCHHHHHHHHHTTC------------CTTCCCTTCCTTTTTSTT--SCHHHHHHHHHH------TCCS
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCC------------CcCCcCCCCCCHHHHHHc--CCHHHHHHHHHC------CCCC
Confidence 58999999999999999999999998 578999999999999998 788899999997 5689
Q ss_pred cCCCCC-CCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 968 SILDAS-GHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 968 NarD~~-G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
|.+|.. |.||||+|+..|+.+++++|+++.++.
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 104 (136)
T 1d9s_A 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104 (136)
T ss_dssp SCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC
T ss_pred CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 999999 999999999999999999999986653
No 96
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.70 E-value=3.1e-17 Score=153.92 Aligned_cols=103 Identities=20% Similarity=0.227 Sum_probs=90.3
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.+.|+||+||+.|+.++|++||++|+ ++|.+|..|.||||+|+.. ++.+++++|+++ ++++
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll~~g~------------~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~------g~~~ 73 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILMANGA------------DVNAKDEYGLTPLYLATAH-GHLEIVEVLLKN------GADV 73 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTC------------CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCT
T ss_pred cccHHHHHHHHhCCHHHHHHHHHcCC------------CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCC
Confidence 47899999999999999999999998 5788999999999999986 778899999997 5689
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeee
Q 001317 968 SILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPV 1009 (1102)
Q Consensus 968 NarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i 1009 (1102)
|.+|.+|.||||+|+..|+.+++++|+++.++. .+|+.+|.+
T Consensus 74 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~ 119 (136)
T 2jab_A 74 NAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDI 119 (136)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHH
Confidence 999999999999999999999999999986653 234444444
No 97
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.69 E-value=3.7e-17 Score=172.24 Aligned_cols=148 Identities=16% Similarity=0.090 Sum_probs=113.0
Q ss_pred hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCC----
Q 001317 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSL-TSSNDTPQK---- 922 (1102)
Q Consensus 848 tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GA-d~~~gsa~~---- 922 (1102)
.+++.|+.+|+.+.++.|+..+.+..+ +.. +. .|+||||+||..|+.++|++||++|+ +.......+
T Consensus 78 ~~l~~a~~~~~~~~~~~l~~~~~~~~~--n~~-----d~-~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL 149 (276)
T 4hbd_A 78 SDAHPELVRRHLVTFRAMSARLLDYVV--NIA-----DS-NGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPI 149 (276)
T ss_dssp TTCCHHHHHHHHHHHHHHCHHHHHHHH--TCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhcC--cCC-----CC-CCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHH
Confidence 566788888888888888887655222 222 22 59999999999999999999999998 431111100
Q ss_pred ----------------------cCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHH
Q 001317 923 ----------------------YIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSY 980 (1102)
Q Consensus 923 ----------------------ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHy 980 (1102)
+..+++..+..|+||||+||.. |..++|++|++. +|++|++|.+|.||||+
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~-g~~~~v~~Ll~~------gad~n~~d~~G~TpLh~ 222 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSH-GRVDVVKALLAC------EADVNVQDDDGSTALMC 222 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHH
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHc-CCHHHHHHHHhC------CCCCCCCCCCCCCHHHH
Confidence 0125667788999999999985 788999999997 57899999999999999
Q ss_pred HHHcCCHHHHHHHHH-hhccc----cCCceeeeeC
Q 001317 981 ALMKNNHAYNKLVAR-KLADR----RNGQVTIPVG 1010 (1102)
Q Consensus 981 Aa~~G~~eiVeLLl~-Kia~~----~~~~v~l~i~ 1010 (1102)
|+..|+.++|++|++ +.++. .+|..+|.+.
T Consensus 223 A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A 257 (276)
T 4hbd_A 223 ACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVA 257 (276)
T ss_dssp HHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred HHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHH
Confidence 999999999999998 55443 2455555543
No 98
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.69 E-value=2.5e-17 Score=174.04 Aligned_cols=122 Identities=11% Similarity=0.010 Sum_probs=62.2
Q ss_pred hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcC-chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWE-IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 848 tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g-~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+|||+|+.+|+.+++++|++.+++ ++.. +. .| .||||+|+..|+.++|++||++|++
T Consensus 97 t~L~~A~~~g~~~~v~~Ll~~ga~----~~~~-----~~-~g~~t~L~~A~~~~~~~~v~~Ll~~g~~------------ 154 (285)
T 3kea_A 97 TALYYAVDSGNMQTVKLFVKKNWR----LMFY-----GK-TGWKTSFYHAVMLNDVSIVSYFLSEIPS------------ 154 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGG----GGGC-----SS-SGGGSHHHHHHHTTCHHHHHHHHTTSCT------------
T ss_pred cHHHHHHHcCCHHHHHHHHhcCCC----CCcc-----CC-CCCCCHHHHHHHcCCHHHHHHHHhCCCc------------
Confidence 455555555555555555554222 1111 11 23 4555555555555555555555542
Q ss_pred CCCCCC-CCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCH-HHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNLAGP-GGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSP-YSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pnakd~-~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TP-LHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
..+. .|.||||+|+.. |+.+++++|+++ +|++|.+|..|.|| ||+|+..|+.+++++|++++++.
T Consensus 155 --~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~------gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~ 221 (285)
T 3kea_A 155 --TFDLAILLSCIHITIKN-GHVDMMILLLDY------MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINI 221 (285)
T ss_dssp --TCCCSTHHHHHHHHHHT-TCHHHHHHHHHH------HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCS
T ss_pred --cccccCCccHHHHHHHc-ChHHHHHHHHHc------CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 1111 555666666553 455566666654 34556666666665 66666666666666666555443
No 99
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.68 E-value=7e-17 Score=176.82 Aligned_cols=132 Identities=17% Similarity=0.169 Sum_probs=111.5
Q ss_pred hhHHHHHHhcCcchhHHHHHHH----HHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDI----LVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQK 922 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~----L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ 922 (1102)
+++||+|+.+|+.++++.|+.. +...+++++.. +. .|.||||+|+..|+.+||++||++|+
T Consensus 126 ~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~-----d~-~g~TpL~~A~~~g~~~iv~~Ll~~ga--------- 190 (373)
T 2fo1_E 126 RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM-----DC-DENTPLMLAVLARRRRLVAYLMKAGA--------- 190 (373)
T ss_dssp CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC-----CT-TSCCHHHHHHHHTCHHHHHHHHHTTC---------
T ss_pred CCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC-----CC-CCCCHHHHHHHcChHHHHHHHHHCCC---------
Confidence 4999999999999999998742 22344555543 22 59999999999999999999999998
Q ss_pred cCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcC---CHHHHHHHHHhhcc
Q 001317 923 YIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKN---NHAYNKLVARKLAD 999 (1102)
Q Consensus 923 ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G---~~eiVeLLl~Kia~ 999 (1102)
+++.++..|.||||+|+.. |+.+++++|++++. .+++++.+|.+|.||||+|+..| +.+++++|+++.++
T Consensus 191 ---~~~~~~~~g~t~L~~A~~~-g~~~~v~~Ll~~~~---~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~ 263 (373)
T 2fo1_E 191 ---DPTIYNKSERSALHQAAAN-RDFGMMVYMLNSTK---LKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 263 (373)
T ss_dssp ---CSCCCCTTCCCHHHHHHHT-TCHHHHHHHTTSHH---HHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCC
T ss_pred ---CCcccCCCCCCHHHHHHHC-CCHHHHHHHHhcCc---cccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCC
Confidence 5789999999999999985 78899999998720 12678999999999999999998 89999999999766
Q ss_pred c
Q 001317 1000 R 1000 (1102)
Q Consensus 1000 ~ 1000 (1102)
-
T Consensus 264 ~ 264 (373)
T 2fo1_E 264 V 264 (373)
T ss_dssp S
T ss_pred c
Confidence 4
No 100
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.68 E-value=1e-16 Score=146.56 Aligned_cols=87 Identities=18% Similarity=0.194 Sum_probs=81.3
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|.|+||+|+..|+.++|++||++|+ ++|.+|..|.||||+||.. ++.+++++|+++ ++++
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~i~~~d~~g~tpLh~A~~~-~~~~~v~~Ll~~------ga~~ 83 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANGA------------DVAAKDKNGSTPLHLAARN-GHLEVVKLLLEA------GADV 83 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTC------------CTTCCCTTCCCHHHHHHHT-TCHHHHHHHHHT------TCCT
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCC------------CCCccCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCc
Confidence 58899999999999999999999998 5788999999999999985 788999999997 5689
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHH
Q 001317 968 SILDASGHSPYSYALMKNNHAYNKLV 993 (1102)
Q Consensus 968 NarD~~G~TPLHyAa~~G~~eiVeLL 993 (1102)
|.+|..|.||||+|+..|+.+++++|
T Consensus 84 ~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 84 XAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccccCCCcHHHHHHHcCCHHHHHHh
Confidence 99999999999999999999999987
No 101
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.68 E-value=2.5e-16 Score=156.63 Aligned_cols=124 Identities=18% Similarity=0.145 Sum_probs=101.9
Q ss_pred hHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCC
Q 001317 848 FLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPP 927 (1102)
Q Consensus 848 tLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdp 927 (1102)
++|++|+..|..++++.|++.+ .+++.. + ..|.||||+|++.|+.++|++|+++|++ +
T Consensus 11 ~~l~~A~~~g~~~~~~~Ll~~g----~~~~~~-----~-~~g~t~L~~A~~~~~~~~v~~Ll~~~~~------------~ 68 (240)
T 3eu9_A 11 WDIVKATQYGIYERCRELVEAG----YDVRQP-----D-KENVTLLHWAAINNRIDLVKYYISKGAI------------V 68 (240)
T ss_dssp CCHHHHHHTTCHHHHHHHHHTT----CCTTCC-----C-TTSCCHHHHHHHTTCHHHHHHHHHTTCC------------T
T ss_pred hHHHHHHHcCChHHHHHHHHcC----CCcCCC-----C-CCCCCHHHHHHHhCCHHHHHHHHHcCCc------------c
Confidence 7899999999999999999853 333433 2 2588999999999999999999999883 3
Q ss_pred C-CCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 928 N-LAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 928 n-akd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
+ ..+..|.||||+|+.. +..+++++|++. +++++.+|..|.||||+|+..|+.+++++|+++..+-
T Consensus 69 ~~~~~~~~~t~L~~A~~~-~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~ 135 (240)
T 3eu9_A 69 DQLGGDLNSTPLHWATRQ-GHLSMVVQLMKY------GADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDV 135 (240)
T ss_dssp TCCBTTTTBCHHHHHHHH-TCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred hhhcCCcCCChhHHHHHc-CCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCc
Confidence 3 3345589999999985 678899999987 5678899999999999999999999999999885543
No 102
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.67 E-value=1.8e-16 Score=143.36 Aligned_cols=93 Identities=25% Similarity=0.236 Sum_probs=85.4
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|+||||+|++.|+.++|++|+++|+ +++.++..|.||||+|+.. +..+++++|++. ++++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~------------~~~~~~~~g~t~L~~A~~~-~~~~~~~~Ll~~------g~~~ 61 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA------------DVNAKDKNGRTPLHLAARN-GHLEVVKLLLEA------GADV 61 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC------------CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC------------CCCCcCCCCCcHHHHHHHc-CcHHHHHHHHHc------CCCC
Confidence 37899999999999999999999998 4788899999999999985 778899999987 5678
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHhhcc
Q 001317 968 SILDASGHSPYSYALMKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 968 NarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~ 999 (1102)
+.+|..|.||||+|+..|+.+++++|+++.++
T Consensus 62 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~ 93 (126)
T 1n0r_A 62 NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93 (126)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred cccCCCCCcHHHHHHHcChHHHHHHHHHcCCC
Confidence 99999999999999999999999999998655
No 103
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.67 E-value=1.6e-16 Score=160.13 Aligned_cols=107 Identities=17% Similarity=0.083 Sum_probs=95.2
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|.||||+|+..|+.++|++||++|+ ++|.+|..|+||||+||.. ++.++|++|++.+ ++++
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~------------~~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~~-----g~~~ 133 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDNRV------------GVNGLDKAGSTALYWACHG-GHKDIVEMLFTQP-----NIEL 133 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHTTC------------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHTTST-----TCCC
T ss_pred ccccccccccccCcHHHHHHHHhCCC------------CccccCCCCCCHHHHHHHc-CCHHHHHHHHcCC-----CCCc
Confidence 58899999999999999999999998 5789999999999999985 7889999999862 5679
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeCcc
Q 001317 968 SILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVGVE 1012 (1102)
Q Consensus 968 NarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~~~ 1012 (1102)
|.+|..|.||||+|+..|+.+++++|+++.++. .+|+.+|.+...
T Consensus 134 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 134 NQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN 182 (222)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCS
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcc
Confidence 999999999999999999999999999997765 367777777654
No 104
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.66 E-value=1.8e-16 Score=163.53 Aligned_cols=104 Identities=21% Similarity=0.194 Sum_probs=93.7
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.+.||||+|+..|+.++|++||++|+ ++|.+|..|+||||+||.. |..++|++|++. ++++
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~------------~~~~~d~~g~tpLh~A~~~-g~~~~v~~Ll~~------ga~~ 80 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMN------------DPSQPNEEGITALHNAICG-ANYSIVDFLITA------GANV 80 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSS------------CTTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT------TCCT
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCC------------CCCCCCCCCCCHHHHHHHc-CCHHHHHHHHHC------CCCC
Confidence 57899999999999999999999998 5789999999999999985 788999999997 5789
Q ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc-----cCCceeeeeC
Q 001317 968 SILDASGHSPYSYALMKNNHAYNKLVARKLADR-----RNGQVTIPVG 1010 (1102)
Q Consensus 968 NarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~-----~~~~v~l~i~ 1010 (1102)
|.+|..|.||||+|+..|+.+++++|+++.++- ..|..+|.+.
T Consensus 81 n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 81 NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 999999999999999999999999999986654 2577777775
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.65 E-value=2.3e-16 Score=155.36 Aligned_cols=105 Identities=15% Similarity=0.052 Sum_probs=92.2
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|.||||+|++.|+.++|++||+ |+ ++|.+|..|+||||+|+.. ++.+++++|++. ++++
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~------------~~~~~d~~g~t~L~~A~~~-~~~~~v~~Ll~~------ga~~ 102 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DR------------DVDAVDENGRTALLFVAGL-GSDKCVRLLAEA------GADL 102 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TS------------CTTCCCTTSCCHHHHHHHH-TCHHHHHHHHHT------TCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cC------------CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHc------CCCC
Confidence 48899999999999999999999 77 5789999999999999996 788899999997 5789
Q ss_pred cCCC-CCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeCcc
Q 001317 968 SILD-ASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVGVE 1012 (1102)
Q Consensus 968 NarD-~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~~~ 1012 (1102)
|.+| .+|.||||+|+..|+.+++++|+++.++. .+|+.+|.+...
T Consensus 103 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 103 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE 152 (183)
T ss_dssp TCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHH
T ss_pred CcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHH
Confidence 9999 88999999999999999999999987664 256666666543
No 106
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.63 E-value=3.8e-16 Score=149.81 Aligned_cols=103 Identities=16% Similarity=0.098 Sum_probs=90.2
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|.||||+|++.|+.++|++||++|+ ++|.+|..|.||||+|+ .++.+++++|++. ++++
T Consensus 11 ~~~t~L~~A~~~g~~~~v~~Ll~~g~------------~~~~~~~~g~t~L~~A~--~~~~~~v~~Ll~~------g~~~ 70 (156)
T 1bi7_B 11 PSADWLATAAARGRVEEVRALLEAGA------------NPNAPNSYGRRPIQVMM--MGSARVAELLLLH------GAEP 70 (156)
T ss_dssp CSTTHHHHHHHHTCHHHHHHHHTTTC------------CTTCCCSSSCCTTTSSC--TTCHHHHHHHHTT------TCCC
T ss_pred cchHHHHHHHHcCCHHHHHHHHHcCC------------CCCCCCCCCCCHHHHHH--cCCHHHHHHHHHc------CCCC
Confidence 58999999999999999999999998 57899999999999984 5788999999997 5789
Q ss_pred cCCCCCCCC-HHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeC
Q 001317 968 SILDASGHS-PYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVG 1010 (1102)
Q Consensus 968 NarD~~G~T-PLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~ 1010 (1102)
|.+|..|.| |||+|+..|+.+++++|+++.++- ..|..+|.+.
T Consensus 71 ~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 118 (156)
T 1bi7_B 71 NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLA 118 (156)
T ss_dssp CCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHH
T ss_pred CCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 999999999 999999999999999999986654 2455555543
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.62 E-value=5.3e-16 Score=160.70 Aligned_cols=104 Identities=14% Similarity=0.041 Sum_probs=92.5
Q ss_pred cCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCC
Q 001317 888 WEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWN 967 (1102)
Q Consensus 888 ~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~v 967 (1102)
.|.||||+|++.|+.++|++||+ |+ ++|.+|..|+||||+||.. |+.++|++|+++ ++++
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~------------~~~~~d~~g~t~L~~A~~~-g~~~~v~~Ll~~------ga~~ 103 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DR------------DVDAVDENGRTALLFVAGL-GSDKCVRLLAEA------GADL 103 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TC------------CTTCBCTTSCBHHHHHHHH-TCHHHHHHHHHT------TCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CC------------CCCCcCCCCCCHHHHHHHC-CCHHHHHHHHHc------CCCC
Confidence 48899999999999999999999 87 5789999999999999996 788999999998 5789
Q ss_pred cCCC-CCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeCc
Q 001317 968 SILD-ASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVGV 1011 (1102)
Q Consensus 968 NarD-~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~~ 1011 (1102)
|.+| ..|.||||+|+.+|+.++|++|+++.++. .+|..+|.+..
T Consensus 104 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 104 DHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 152 (244)
T ss_dssp TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 9999 88999999999999999999999997664 35777776654
No 108
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.60 E-value=4.2e-16 Score=168.05 Aligned_cols=124 Identities=13% Similarity=-0.021 Sum_probs=96.2
Q ss_pred HHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCC
Q 001317 849 LLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPN 928 (1102)
Q Consensus 849 LL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpn 928 (1102)
++++|+..+..++++.|++. +++++.. ....|+||||+||..|+.++|++||++|+ ++|
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~----g~dvn~~-----~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Ga------------d~n 158 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNT----QLNLNIP-----VDEHGNTPLHWLTSIANLELVKHLVKHGS------------NRL 158 (327)
T ss_dssp ----CHHHHHHHHHHHCTTS----CCCSCSC-----CSTTCCCHHHHHHHTTCHHHHHHHHHTTC------------CTT
T ss_pred hhHHHHHhhHHHHHHHHHhc----CCCcccc-----cCCCCCcHHHHHHHcCCHHHHHHHHHcCC------------CCC
Confidence 45667766666777777663 4555541 12259999999999999999999999998 589
Q ss_pred CCCCCCChHHHHHHhcCCc---HHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHH----cCCHHHHHHHHHhhcc
Q 001317 929 LAGPGGITPLHLAACTSDS---DDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALM----KNNHAYNKLVARKLAD 999 (1102)
Q Consensus 929 akd~~G~TPLHiAA~~~g~---eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~----~G~~eiVeLLl~Kia~ 999 (1102)
.+|..|+||||+|+.. |+ .++++.|++. + .++++.+|..|.||||+|+. .|+.+++++|++++..
T Consensus 159 ~~d~~g~TpLh~A~~~-g~~~~~~~~~~ll~~----~-~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~ 230 (327)
T 1sw6_A 159 YGDNMGESCLVKAVKS-VNNYDSGTFEALLDY----L-YPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMG 230 (327)
T ss_dssp BCCTTCCCHHHHHHHS-SHHHHTTCHHHHHHH----H-GGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHh-cccccHHHHHHHHHh----h-hccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHH
Confidence 9999999999999985 55 3455666654 1 24689999999999999999 9999999999988654
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.58 E-value=1.8e-16 Score=177.37 Aligned_cols=129 Identities=11% Similarity=0.138 Sum_probs=100.7
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++||+|+..|+.++|+.|++.+.... ..+ .++. .+.||||+|+++|+.++|++||++|++.. .
T Consensus 93 ~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~-~~~-----~~~~-~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~---------~ 156 (376)
T 2aja_A 93 EVICFVAAITGCSSALDTLCLLLTSDE-IVK-----VIQA-ENYQAFRLAAENGHLHVLNRLCELAPTEI---------M 156 (376)
T ss_dssp HHHHHHHHHHCCHHHHHHHTTC--CCS-SCC-------CH-HHHHHHHHHHHTTCHHHHHHHHHSCTTTH---------H
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCcHH-HHH-----Hhcc-CCCCHHHHHHHcCCHHHHHHHHhCCCCcc---------c
Confidence 599999999999999999998643110 001 1122 37799999999999999999999997310 0
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcC--CCCCCCCHHHHHH-HcCCHHHHHHHHHhhcc
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSI--LDASGHSPYSYAL-MKNNHAYNKLVARKLAD 999 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNa--rD~~G~TPLHyAa-~~G~~eiVeLLl~Kia~ 999 (1102)
++..+.+ .||||+||. .|+.+||++|+++ +++++. +|.+|.||||+|+ .+||.++|++|+++.+.
T Consensus 157 ~~i~~~~-~TpLh~Aa~-~G~~eiv~~Ll~~------ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 157 AMIQAEN-YHAFRLAAE-NGHLHVLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHSHHH-HHHHHHHHH-TTCHHHHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred cccCCCC-CCHHHHHHH-CCCHHHHHHHHHc------CCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 1223333 999999998 4889999999998 567777 8999999999999 99999999999987543
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.56 E-value=2.3e-15 Score=136.71 Aligned_cols=103 Identities=19% Similarity=0.108 Sum_probs=87.9
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++||+|+..|..++++.|++.. ++++.. + ..|.||||+|+..|+.++|++||++|+ +
T Consensus 10 ~t~L~~A~~~~~~~~~~~Ll~~g----~~~~~~-----d-~~g~t~L~~A~~~~~~~~~~~Ll~~g~------------~ 67 (115)
T 2l6b_A 10 NTPLHNAAKNGHAEEVKKLLSKG----ADVNAR-----S-KDGNTPLHLAAKNGHAEIVKLLLAKGA------------D 67 (115)
T ss_dssp CCHHHHHHHHTCHHHHHHHTTTT----CCSSCC-----C-SSSCCTTHHHHTTTCHHHHHHHTTTTC------------C
T ss_pred CCHHHHHHHcCCHHHHHHHHHcC----CCCCCc-----C-CCCCCHHHHHHHcCcHHHHHHHHHcCC------------C
Confidence 48999999999999999999853 334433 2 258999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHH
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPY 978 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPL 978 (1102)
++.+|..|.||||+|+.. +..+++++|+++ +|++|.+|..|.||-
T Consensus 68 ~~~~d~~g~tpl~~A~~~-~~~~~~~~Ll~~------ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 68 VNARSKDGNTPEHLAKKN-GHHEIVKLLDAK------GADVNARSWGSSHHH 112 (115)
T ss_dssp TTCCCTTCCCTTHHHHTT-TCHHHHHHHHTT------SSSHHHHSCCCC---
T ss_pred CcccCCCCCCHHHHHHHC-CCHHHHHHHHHc------CCCCCcCCccccccc
Confidence 789999999999999985 788999999998 678999999999984
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.54 E-value=1.8e-14 Score=127.03 Aligned_cols=88 Identities=23% Similarity=0.253 Sum_probs=77.1
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
+++||+|+..|+.++++.|++.+ .+++.. +. .|.||||+|+..|+.++|++||++|+ +
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g----~~~n~~-----d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga------------~ 60 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAG----ADVNAK-----DK-NGRTPLHLAARNGHLEVVKLLLEAGA------------D 60 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TSCCHHHHHHHTTCHHHHHHHHHTTC------------C
T ss_pred CcHHHHHHHcCCHHHHHHHHHcC----CCCccc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC------------C
Confidence 47999999999999999999953 444433 22 59999999999999999999999998 5
Q ss_pred CCCCCCCCChHHHHHHhcCCcHHHHHHHhCC
Q 001317 927 PNLAGPGGITPLHLAACTSDSDDIIDALTND 957 (1102)
Q Consensus 927 pnakd~~G~TPLHiAA~~~g~eeVVeLLL~~ 957 (1102)
+|.+|..|.||||+|+.. ++.+++++|+++
T Consensus 61 ~~~~d~~g~t~l~~A~~~-~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 61 VNAKDKNGRTPLHLAARN-GHLEVVKLLLEA 90 (93)
T ss_dssp TTCCCTTSCCHHHHHHHT-TCHHHHHHHHHT
T ss_pred CCccCCCCCCHHHHHHHc-CCHHHHHHHHHc
Confidence 789999999999999985 788999999987
No 112
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.53 E-value=3.5e-15 Score=160.86 Aligned_cols=106 Identities=15% Similarity=0.051 Sum_probs=84.1
Q ss_pred hhHHHHHHhc---CcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCc
Q 001317 847 KFLLVFSVDR---GCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKY 923 (1102)
Q Consensus 847 ktLL~FAadr---GwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~y 923 (1102)
.++||+|+.. |..+++++||+.+ .+++.. + ..|+||||+|+..|+.++|++||++|+
T Consensus 191 ~t~Lh~A~~~~~~~~~~iv~~Ll~~g----advn~~-----d-~~G~TpLh~A~~~g~~~~v~~Ll~~ga---------- 250 (301)
T 2b0o_E 191 ELVLHLAVKVANQASLPLVDFIIQNG----GHLDAK-----A-ADGNTALHYAALYNQPDCLKLLLKGRA---------- 250 (301)
T ss_dssp ECHHHHHHHTCCTTTHHHHHHHHHHS----SCTTCC-----C-TTCCCHHHHHHHTTCHHHHHHHHHTTC----------
T ss_pred ccHHHHHHHhcccCcHHHHHHHHhcC----CCCCCC-----C-CCCCCHHHHHHHcCCHHHHHHHHHcCC----------
Confidence 4899999986 8999999999974 334433 2 259999999999999999999999998
Q ss_pred CCCCCCCCCCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCH
Q 001317 924 IFPPNLAGPGGITPLHLAACTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNH 987 (1102)
Q Consensus 924 lfdpnakd~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~ 987 (1102)
++|++|..|.||||+|+.. ++.+|+++|++. +++ .|.||||+|+..|+.
T Consensus 251 --d~~~~d~~G~TpL~~A~~~-~~~~iv~~Ll~~------ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 251 --LVGTVNEAGETALDIARKK-HHKECEELLEQA------QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp --CCSCCCTTSCCHHHHHHHH-TCHHHHHHHHHH------HHH------TTSSCCC--------
T ss_pred --CCCCcCCCCCCHHHHHHHc-CCHHHHHHHHHh------cCC------CCCChhHHHHhcCCc
Confidence 5799999999999999986 788999999987 322 689999999999874
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.50 E-value=1.8e-15 Score=169.33 Aligned_cols=120 Identities=9% Similarity=0.019 Sum_probs=98.9
Q ss_pred hhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCC
Q 001317 847 KFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFP 926 (1102)
Q Consensus 847 ktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfd 926 (1102)
.++||+|+.+|+.++|++|++.+++ ... ..+...+ .||||+|+.+|+.++|++||++|++
T Consensus 129 ~tpL~~Aa~~G~~eiv~~Ll~~gad----~~~---~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~------------ 188 (376)
T 2aja_A 129 YQAFRLAAENGHLHVLNRLCELAPT----EIM---AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPT------------ 188 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCTT----THH---HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGG------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCC----ccc---cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCc------------
Confidence 4799999999999999999996421 000 0111222 8999999999999999999999983
Q ss_pred CCC--CCCCCChHHHHHH-hcCCcHHHHHHHhCCCCCCCCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc
Q 001317 927 PNL--AGPGGITPLHLAA-CTSDSDDIIDALTNDPQEIGPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR 1000 (1102)
Q Consensus 927 pna--kd~~G~TPLHiAA-~~~g~eeVVeLLL~~p~~iGagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~ 1000 (1102)
++. +|..|.||||+|| . .|+.+||++|+++ | + .|.||||+|+.+||.+++++|+++.++.
T Consensus 189 ~~~~~~d~~g~TpL~~Aa~~-~G~~eiv~~Ll~~----g--a-------~~~taL~~Aa~~g~~evv~lL~~~ga~~ 251 (376)
T 2aja_A 189 EATAMIQAENYYAFRWAAVG-RGHHNVINFLLDC----P--V-------MLAYAEIHEFEYGEKYVNPFIARHVNRL 251 (376)
T ss_dssp GHHHHHHHHHHHHHHHHHST-TCCHHHHHHHTTS----H--H-------HHHHHHHCTTTTTTTTHHHHHHHHHHHH
T ss_pred cchhccCCCCCCHHHHHHHH-CCCHHHHHHHHhC----C--C-------ccchHHHHHHHCCCHHHHHHHHhcCccc
Confidence 455 7888999999999 7 5899999999986 2 2 2899999999999999999999997764
No 114
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.47 E-value=5e-14 Score=157.40 Aligned_cols=105 Identities=18% Similarity=0.146 Sum_probs=92.8
Q ss_pred cCchHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCC--CCCChHHHHHHhcCCcHHHHHHHhCCCCCCCCC
Q 001317 888 WEIQLLNRAVKM-KCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAG--PGGITPLHLAACTSDSDDIIDALTNDPQEIGPS 964 (1102)
Q Consensus 888 ~g~TlLH~AV~~-gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd--~~G~TPLHiAA~~~g~eeVVeLLL~~p~~iGag 964 (1102)
.+.|+||+|+.. ++.++|++||++|+ ++|..+ ..|.||||+||.. ++.++|++|+++ +
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Ga------------dvn~~~~~~~g~TpLh~Aa~~-g~~~iv~~LL~~------G 258 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGA------------DVNWVNGGQDNATPLIQATAA-NSLLACEFLLQN------G 258 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTC------------CTTCCCTTTTCCCHHHHHHHT-TCHHHHHHHHHT------T
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCC------------CCCccccccCCCCHHHHHHHC-CCHHHHHHHHHc------C
Confidence 466999999999 99999999999998 467777 8999999999985 788999999998 5
Q ss_pred CCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeCc
Q 001317 965 SWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVGV 1011 (1102)
Q Consensus 965 A~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~~ 1011 (1102)
|++|++|..|.||||+|+..|+.+++++|+++.++. .+|..+|.+..
T Consensus 259 advn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~ 309 (368)
T 3jue_A 259 ANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAM 309 (368)
T ss_dssp CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHH
Confidence 789999999999999999999999999999997665 25777777654
No 115
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.44 E-value=1.7e-13 Score=146.04 Aligned_cols=110 Identities=21% Similarity=0.195 Sum_probs=92.1
Q ss_pred CchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCCCCCCChHHHHHHhcC--CcHHHHHHHhCCCCCCCCCCC
Q 001317 889 EIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLAGPGGITPLHLAACTS--DSDDIIDALTNDPQEIGPSSW 966 (1102)
Q Consensus 889 g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnakd~~G~TPLHiAA~~~--g~eeVVeLLL~~p~~iGagA~ 966 (1102)
..++||.|+..|+.+.|..|++.|++... .+.++..|..|.||||+||..+ ++.++|++|+++ +|+
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~------~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~------ga~ 197 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTE------KIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN------SGN 197 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTS------BCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH------CSC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhh------hccccccccCCCCcchHHHHhcccchHHHHHHHHHC------CCC
Confidence 45899999999999999999999985311 1125777899999999999963 678899999998 578
Q ss_pred CcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeC
Q 001317 967 NSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVG 1010 (1102)
Q Consensus 967 vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~ 1010 (1102)
+|++|.+|.||||+|+..|+.++|++|+++.++. .+|..+|.+.
T Consensus 198 in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A 245 (278)
T 1dcq_A 198 LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 245 (278)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHH
Confidence 9999999999999999999999999999987765 2466666554
No 116
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.44 E-value=9.2e-14 Score=158.92 Aligned_cols=105 Identities=18% Similarity=0.098 Sum_probs=90.8
Q ss_pred chHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcCCCCCCC------CCCCChHHHHHHh--cCCcHHHHHHHhCCCCCC
Q 001317 890 IQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYIFPPNLA------GPGGITPLHLAAC--TSDSDDIIDALTNDPQEI 961 (1102)
Q Consensus 890 ~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~ylfdpnak------d~~G~TPLHiAA~--~~g~eeVVeLLL~~p~~i 961 (1102)
.+.||.|+..|+.++|+.||++|++ +|.. |..|.||||+|+. ..|+.++|++|+++
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~------------~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~---- 196 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD------------FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN---- 196 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC------------SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH----
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc------------ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc----
Confidence 3789999999999999999999984 4444 8899999999954 24788999999998
Q ss_pred CCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHhhccc----cCCceeeeeCcc
Q 001317 962 GPSSWNSILDASGHSPYSYALMKNNHAYNKLVARKLADR----RNGQVTIPVGVE 1012 (1102)
Q Consensus 962 GagA~vNarD~~G~TPLHyAa~~G~~eiVeLLl~Kia~~----~~~~v~l~i~~~ 1012 (1102)
||++|++|.+|.||||+|+..|+.++|++|++++++- .+|..+|.+...
T Consensus 197 --ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~ 249 (497)
T 3lvq_E 197 --GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARK 249 (497)
T ss_dssp --SCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHH
T ss_pred --CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence 5789999999999999999999999999999997775 368888877643
No 117
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.36 E-value=2.1e-12 Score=117.93 Aligned_cols=87 Identities=14% Similarity=0.088 Sum_probs=75.1
Q ss_pred hhhhHHHHHHhcCcchhHHHHHHHHHhccccCCCCChHHHhhhcCchHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCcC
Q 001317 845 RFKFLLVFSVDRGCCALVKAILDILVEGNLSMDGLSRESLEMLWEIQLLNRAVKMKCRRMVDLLIHYSLTSSNDTPQKYI 924 (1102)
Q Consensus 845 RfktLL~FAadrGwcaVVK~LLd~L~~g~v~i~~~s~e~~~~~~g~TlLH~AV~~gs~~IVeLLL~~GAd~~~gsa~~yl 924 (1102)
...++||+|+.+|+.++++.|++.. ++++.. +. .|.||||+||..|+.++|++||++|+
T Consensus 23 ~g~t~L~~A~~~g~~~~v~~Ll~~g----~~i~~~-----d~-~g~tpLh~A~~~~~~~~v~~Ll~~ga----------- 81 (110)
T 2zgd_A 23 DLGKKLLEAARAGQDDEVRILMANG----ADVAAK-----DK-NGSTPLHLAARNGHLEVVKLLLEAGA----------- 81 (110)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTT----CCTTCC-----CT-TCCCHHHHHHHTTCHHHHHHHHHTTC-----------
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcC----CCCCcc-----CC-CCCCHHHHHHHcCCHHHHHHHHHcCC-----------
Confidence 4569999999999999999999853 344433 22 59999999999999999999999998
Q ss_pred CCCCCCCCCCChHHHHHHhcCCcHHHHHHH
Q 001317 925 FPPNLAGPGGITPLHLAACTSDSDDIIDAL 954 (1102)
Q Consensus 925 fdpnakd~~G~TPLHiAA~~~g~eeVVeLL 954 (1102)
++|.+|..|+||||+|+.. +..+++++|
T Consensus 82 -~~~~~d~~g~tpl~~A~~~-~~~~~~~~L 109 (110)
T 2zgd_A 82 -DVXAQDKFGKTAFDISIDN-GNEDLAEIL 109 (110)
T ss_dssp -CTTCCCTTSCCHHHHHHHH-TCHHHHHHH
T ss_pred -CccccccCCCcHHHHHHHc-CCHHHHHHh
Confidence 5789999999999999986 778899987
No 118
>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1
Probab=62.61 E-value=16 Score=33.90 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=50.3
Q ss_pred CCeeeEecceEEecCCeeEEEEEeeccCCCCceEEEeecCCcceeeecccCCCCCcccceeeeeeeecCCCCCCcccceE
Q 001317 679 SPELISVSPLAVVGGQELSFKLRGRNLTNLGTKIHCTFMGGYASQEVTSSTCQGSIYDEIILAGLKIQDTSPSVLGRFFI 758 (1102)
Q Consensus 679 ~P~i~~V~PiAv~ag~~~~f~v~G~NL~~p~trlLcs~~GkYl~~E~~~~~~~g~~~d~~~~~~~~~~~~~P~~~Gr~FI 758 (1102)
.=.|..++|-+-..+..+.+.|.|.+|.. +.++-|.|++.-..+|... ++ .+.|. +.|...|++-|
T Consensus 6 ~~~Itd~sP~~gp~sGGTkv~I~G~~L~~-gs~~~~~fG~~~vpa~~~s---~~----vl~C~------tPp~~~G~v~~ 71 (95)
T 2cxk_A 6 SGMVTDYSPEWSYPEGGVKVLITGPWQEA-SNNYSCLFDQISVPASLIQ---PG----VLRCY------CPAHDTGLVTL 71 (95)
T ss_dssp CSCCCEEECSEECTTCCCEEEEESSCCCC-SSCEEEEETTEEEECEEEE---TT----EEEEE------CCCCCSEEEEE
T ss_pred cEEEEEECCCcccCCCCEEEEEEeECCCC-CccEEEEECCEEEeEEEeE---CC----EEEEE------ecCCCCceEeE
Confidence 34899999999999999999999999965 4589999988655566532 11 22222 44557777777
Q ss_pred EEe
Q 001317 759 EVE 761 (1102)
Q Consensus 759 EVE 761 (1102)
.|.
T Consensus 72 ~v~ 74 (95)
T 2cxk_A 72 QVA 74 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 776
No 119
>1uad_C RSEC5, exocyst complex component SEC5; small GTP-binding protein, immunogloblin-like fold, beta- sandwich, endocytosis/exocytosis complex; HET: GNP; 2.10A {Rattus norvegicus} SCOP: b.1.18.18 PDB: 1hk6_A
Probab=48.83 E-value=25 Score=32.53 Aligned_cols=41 Identities=24% Similarity=0.285 Sum_probs=33.6
Q ss_pred CCCCeeeEecceEEecCCeeEEEEEeeccCCCCceE-EEeecCC
Q 001317 677 WSSPELISVSPLAVVGGQELSFKLRGRNLTNLGTKI-HCTFMGG 719 (1102)
Q Consensus 677 ~~~P~i~~V~PiAv~ag~~~~f~v~G~NL~~p~trl-Lcs~~Gk 719 (1102)
...|+|..++|..-.-| +.+.++|.||......+ -+.+.|.
T Consensus 5 ~p~P~It~i~P~~Gp~G--T~vTI~G~nlg~~~sdv~~V~vgg~ 46 (99)
T 1uad_C 5 RQPPLVTGISPNEGIPW--TKVTIRGENLGTGPTDLIGLTICGH 46 (99)
T ss_dssp CCCCEEEEEESSEESTT--CEEEEEEECSCSSGGGEEEEEETTE
T ss_pred CCCCEEEEEECCCcCCC--CEEEEEEEeCCCCcccceEEEECCE
Confidence 34689999999998665 99999999998876665 4888884
Done!