Query 001322
Match_columns 1100
No_of_seqs 568 out of 2581
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 22:12:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001322.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001322hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0w_A Phospholipase D; hydrol 100.0 4.6E-37 1.6E-41 366.1 21.3 160 362-577 55-225 (506)
2 3hsi_A Phosphatidylserine synt 100.0 1.8E-33 6.1E-38 330.8 23.9 355 361-941 25-401 (458)
3 1xdp_A Polyphosphate kinase; P 99.9 3.7E-21 1.3E-25 234.8 18.3 141 366-575 340-494 (687)
4 2o8r_A Polyphosphate kinase; s 99.8 7.4E-20 2.5E-24 222.1 19.6 144 366-572 345-498 (705)
5 4ggj_A Mitochondrial cardiolip 99.6 1.9E-15 6.7E-20 158.7 8.1 144 362-577 35-179 (196)
6 1byr_A Protein (endonuclease); 99.5 1.8E-13 6.3E-18 136.7 11.9 143 364-576 4-149 (155)
7 1byr_A Protein (endonuclease); 99.5 2.3E-13 7.9E-18 136.0 11.9 118 763-940 13-130 (155)
8 4gel_A Mitochondrial cardiolip 99.4 4.9E-13 1.7E-17 141.9 8.3 144 369-576 54-210 (220)
9 4ggj_A Mitochondrial cardiolip 99.4 4.1E-13 1.4E-17 141.0 6.5 118 764-943 46-163 (196)
10 3p0c_A Nischarin; structural g 99.1 5.4E-10 1.9E-14 110.1 12.1 104 45-204 24-128 (130)
11 1xdp_A Polyphosphate kinase; P 99.1 1.9E-10 6.6E-15 140.8 9.7 118 767-942 350-479 (687)
12 3hsi_A Phosphatidylserine synt 99.0 1.2E-09 3.9E-14 128.8 13.7 136 743-926 27-165 (458)
13 4gel_A Mitochondrial cardiolip 99.0 3.9E-10 1.3E-14 119.5 8.7 136 763-943 57-195 (220)
14 2ett_A Sorting nexin-22; PX do 99.0 1.8E-09 6.1E-14 106.2 12.6 109 42-203 9-119 (128)
15 4az9_A Sorting nexin-24; prote 99.0 1.5E-09 5.2E-14 106.8 11.9 110 38-202 18-127 (129)
16 1h6h_A Neutrophil cytosol fact 99.0 1.4E-09 4.6E-14 108.7 10.4 115 45-203 22-138 (143)
17 1kq6_A NCF-1, P47PHOX, neutrop 99.0 2.2E-09 7.5E-14 107.0 11.6 129 45-217 8-140 (141)
18 1xte_A Serine/threonine-protei 98.9 1.8E-09 6.2E-14 109.3 9.3 109 43-203 7-117 (154)
19 1v0w_A Phospholipase D; hydrol 98.9 4.2E-09 1.4E-13 125.5 12.2 141 763-940 65-207 (506)
20 2v6v_A BUD emergence protein 1 98.8 1.7E-08 5.7E-13 102.5 11.4 124 43-208 17-143 (156)
21 3lui_A Sorting nexin-17, SNX17 98.8 9.8E-09 3.4E-13 98.9 9.0 106 45-202 5-110 (115)
22 2ar5_A Phosphoinositide 3-kina 98.7 7.2E-08 2.5E-12 93.7 10.1 106 45-202 7-117 (121)
23 2csk_A Sorting nexin 12; SNX12 98.6 9.6E-08 3.3E-12 95.7 10.4 116 45-203 12-133 (146)
24 2i4k_A Sorting nexin-1, SNX1; 98.6 1E-08 3.5E-13 100.0 3.1 114 45-200 5-127 (128)
25 2iwl_X Phosphatidylinositol-4- 98.6 9.4E-08 3.2E-12 95.2 9.5 107 45-203 22-133 (140)
26 2v14_A Kinesin-like motor prot 98.6 1.3E-07 4.5E-12 93.5 10.4 96 45-191 7-104 (134)
27 1ocs_A Sorting nexin GRD19; so 98.6 2.6E-07 8.8E-12 94.3 11.8 113 45-201 37-159 (162)
28 3iq2_A Sorting nexin-7; SNX7, 98.6 2.4E-07 8E-12 92.1 11.3 108 45-203 10-127 (138)
29 2l73_A NADPH oxidase organizer 98.5 1.9E-07 6.4E-12 94.1 9.8 123 44-208 9-135 (149)
30 1kmd_A VAM7P, vacuolar morphog 98.5 1.2E-07 4.1E-12 91.5 6.7 98 45-201 7-115 (117)
31 1u5d_A SKAP55, SRC kinase-asso 98.5 5.8E-07 2E-11 83.3 10.0 101 211-336 3-104 (108)
32 1pls_A Pleckstrin homology dom 98.5 1.1E-06 3.8E-11 82.8 11.9 94 212-336 6-100 (113)
33 2rsg_A Collagen type IV alpha- 98.4 7.3E-07 2.5E-11 81.5 8.9 88 213-335 3-92 (94)
34 2dn6_A KIAA0640 protein; PH do 98.4 1.1E-06 3.6E-11 82.8 10.1 96 210-336 7-102 (115)
35 1u5f_A SRC-associated adaptor 98.4 1.9E-06 6.4E-11 85.6 11.8 105 208-337 14-119 (148)
36 2d9y_A Pleckstrin homology dom 98.4 2.5E-06 8.4E-11 80.5 12.1 98 210-336 10-108 (117)
37 1upq_A PEPP1; PH domain, phosp 98.4 1.7E-06 5.9E-11 82.5 11.0 97 212-337 12-109 (123)
38 2yry_A Pleckstrin homology dom 98.4 2E-06 6.8E-11 81.9 11.2 98 210-336 21-119 (122)
39 2cod_A Centaurin-delta 1; ARF 98.3 1.6E-06 5.5E-11 82.0 10.1 92 210-336 7-98 (115)
40 1v5u_A SBF1, SET binding facto 98.3 3.2E-06 1.1E-10 79.7 12.1 106 209-339 6-113 (117)
41 1v5p_A Pleckstrin homology dom 98.3 2.3E-06 7.7E-11 83.6 10.9 98 213-338 17-121 (126)
42 2da0_A 130-kDa phosphatidylino 98.3 1.8E-06 6.1E-11 82.0 10.0 90 212-336 11-100 (114)
43 2dkp_A Pleckstrin homology dom 98.3 2.1E-06 7.3E-11 82.4 10.6 98 210-336 20-118 (128)
44 2dhk_A TBC1 domain family memb 98.3 3.6E-06 1.2E-10 80.5 12.0 96 209-336 6-103 (119)
45 1v89_A Hypothetical protein KI 98.3 2.1E-06 7.2E-11 80.9 10.2 99 208-337 5-112 (118)
46 1wi1_A Calcium-dependent activ 98.3 1.9E-06 6.5E-11 84.2 10.0 97 212-336 9-109 (126)
47 1wgq_A FYVE, rhogef and PH dom 98.3 6.1E-06 2.1E-10 77.3 13.2 98 209-338 6-104 (109)
48 1eaz_A Tandem PH domain contai 98.3 2.2E-06 7.4E-11 81.9 10.1 99 209-336 12-110 (125)
49 1fao_A Dual adaptor of phospho 98.3 3.6E-06 1.2E-10 80.8 11.5 95 210-336 17-111 (126)
50 1fgy_A GRP1; PH domain, signal 98.3 4.4E-06 1.5E-10 79.8 11.4 92 212-336 6-119 (127)
51 1v88_A Oxysterol binding prote 98.3 5.1E-06 1.7E-10 81.6 11.6 95 210-338 7-125 (130)
52 2d9v_A Pleckstrin homology dom 98.2 5.3E-06 1.8E-10 80.8 11.6 102 210-338 7-115 (130)
53 1x1f_A Signal-transducing adap 98.2 2.9E-06 9.8E-11 85.4 9.8 97 209-336 16-112 (149)
54 2cof_A Protein KIAA1914; PH do 98.2 7.2E-06 2.5E-10 76.8 11.5 93 210-336 7-100 (107)
55 2lul_A Tyrosine-protein kinase 98.2 6.1E-06 2.1E-10 84.0 11.2 106 210-338 14-122 (164)
56 1dyn_A Dynamin; signal transdu 98.2 7.5E-06 2.6E-10 79.5 11.0 96 212-336 13-116 (125)
57 3aj4_A Pleckstrin homology dom 98.2 6E-06 2.1E-10 77.6 10.1 103 212-336 6-110 (112)
58 1btk_A Bruton'S tyrosine kinas 98.1 6.5E-06 2.2E-10 84.3 9.4 111 212-337 4-132 (169)
59 2i5f_A Pleckstrin; PH domain, 98.1 1.2E-05 4.2E-10 74.7 10.5 98 209-335 5-107 (109)
60 3rcp_A Pleckstrin homology dom 98.1 2.3E-05 8E-10 72.4 12.2 78 245-337 13-93 (103)
61 3tfm_A Myosin X; split PH doma 98.1 1.3E-05 4.4E-10 85.8 11.5 79 245-337 77-155 (228)
62 2wwe_A Phosphoinositide-3-kina 98.1 1E-05 3.4E-10 78.6 9.1 97 45-198 27-125 (127)
63 3dyt_A Sorting nexin-9; 3-heli 98.1 6E-06 2.1E-10 94.6 8.9 105 45-200 22-128 (366)
64 1x05_A Pleckstrin; PH domain, 98.0 1.5E-05 5.2E-10 76.7 10.0 100 209-337 16-120 (129)
65 1u5e_A SRC-associated adaptor 98.0 1.3E-05 4.5E-10 85.0 10.3 103 209-336 104-207 (211)
66 2coc_A FYVE, rhogef and PH dom 98.0 2.1E-05 7E-10 75.4 10.6 82 245-336 21-105 (112)
67 2j59_M RHO-GTPase activating p 98.0 1.8E-05 6.2E-10 80.1 10.8 105 212-336 4-110 (168)
68 2dyb_A Neutrophil cytosol fact 98.0 1.1E-05 3.7E-10 91.6 10.0 114 45-202 25-140 (341)
69 4a6h_A Phosphatidylinositol 4, 98.0 2.3E-05 7.7E-10 76.0 10.6 95 211-336 6-117 (120)
70 3cxb_B Pleckstrin homology dom 98.0 2.7E-05 9.1E-10 74.1 10.9 82 245-336 18-100 (112)
71 1wg7_A Dedicator of cytokinesi 98.0 2.6E-05 8.9E-10 77.3 10.9 101 209-336 16-123 (150)
72 1btn_A Beta-spectrin; signal t 98.0 1.8E-05 6.2E-10 73.2 9.0 81 245-335 21-106 (106)
73 4akv_A Sorting nexin-33; trans 98.0 7.4E-06 2.5E-10 94.5 7.7 105 45-200 43-148 (386)
74 2p0d_A RHO GTPase-activating p 98.0 3E-05 1E-09 75.6 10.9 101 210-336 11-123 (129)
75 1unq_A RAC-alpha serine/threon 98.0 5.5E-06 1.9E-10 79.5 5.5 96 212-336 9-109 (125)
76 1x1g_A Pleckstrin 2; PH domain 98.0 2.3E-05 7.8E-10 75.4 9.6 104 210-337 17-124 (129)
77 2d9x_A Oxysterol binding prote 98.0 1.6E-05 5.5E-10 76.0 8.2 92 210-336 7-103 (120)
78 2y7b_A Actin-binding protein a 97.9 1.3E-05 4.4E-10 77.6 7.5 100 211-336 5-127 (134)
79 2o8r_A Polyphosphate kinase; s 97.9 2.4E-05 8.4E-10 95.7 11.1 121 765-943 353-487 (705)
80 1wjm_A Beta-spectrin III; PH d 97.9 1.8E-05 6.2E-10 75.9 7.2 107 208-336 5-116 (123)
81 3lju_X ARF-GAP with dual PH do 97.8 5.4E-05 1.9E-09 87.3 11.1 103 211-337 269-372 (386)
82 2q13_A DCC-interacting protein 97.7 0.00012 4.1E-09 84.1 12.1 95 211-336 278-374 (385)
83 2w2x_D 1-phosphatidylinositol- 97.7 8.2E-05 2.8E-09 72.0 8.2 97 209-336 10-118 (124)
84 2rlo_A Centaurin-gamma 1; spli 97.7 0.00011 3.8E-09 71.1 9.0 35 302-336 88-123 (128)
85 2r09_A Cytohesin-3; autoinhibi 97.7 0.00014 4.9E-09 82.6 11.1 92 212-336 214-327 (347)
86 3a8p_A T-lymphoma invasion and 97.6 0.0002 6.8E-09 78.4 10.8 80 245-336 37-123 (263)
87 1qqg_A IRS-1, insulin receptor 97.6 9.5E-05 3.2E-09 81.1 7.9 79 246-336 21-111 (264)
88 2ys3_A UNC-112-related protein 97.6 0.00017 5.9E-09 71.1 8.6 80 245-336 26-111 (137)
89 3tca_A Amyloid beta A4 precurs 97.5 0.00016 5.6E-09 79.1 9.2 100 211-336 168-275 (291)
90 3lju_X ARF-GAP with dual PH do 97.5 0.00013 4.3E-09 84.3 8.5 92 212-335 147-244 (386)
91 1dro_A Beta-spectrin; cytoskel 97.5 0.00015 5E-09 69.6 7.5 110 211-336 8-118 (122)
92 4h8s_A DCC-interacting protein 97.3 0.0002 6.8E-09 82.8 6.9 94 212-336 302-397 (407)
93 3hk0_A Growth factor receptor- 97.3 0.00097 3.3E-08 72.7 11.6 98 212-336 133-239 (256)
94 3hpc_X SNX5 protein; sprting n 97.3 0.00057 2E-08 69.5 9.0 44 45-94 13-61 (161)
95 2dtc_A RAL guanine nucleotide 97.2 0.002 6.8E-08 63.0 11.7 99 213-337 3-112 (126)
96 3pp2_A RHO GTPase-activating p 97.2 0.0014 4.7E-08 63.3 10.5 106 209-336 6-122 (124)
97 2rov_A RHO-associated protein 97.2 0.00081 2.8E-08 64.8 7.9 86 246-336 19-114 (117)
98 4f7h_A Fermitin family homolog 97.0 0.0036 1.2E-07 63.4 10.9 80 245-336 64-149 (173)
99 1w1g_A HPDK1, 3-phosphoinositi 96.7 0.0033 1.1E-07 63.0 8.1 87 211-336 52-138 (151)
100 4gmv_A RAS-associated and plec 96.7 0.0049 1.7E-07 68.0 9.9 100 210-336 157-265 (281)
101 4bbk_A Kindlin-1, fermitin fam 96.7 0.0049 1.7E-07 61.8 8.7 80 245-336 43-128 (165)
102 2fjl_A 1-phosphatidylinositol- 96.6 0.0079 2.7E-07 60.3 9.8 38 299-336 107-147 (150)
103 4ejn_A RAC-alpha serine/threon 96.4 0.0037 1.3E-07 72.4 6.9 97 211-336 6-107 (446)
104 3qph_A TRMB, A global transcri 96.2 0.0057 2E-07 69.3 7.1 109 761-941 116-229 (342)
105 3qph_A TRMB, A global transcri 95.7 0.039 1.3E-06 62.5 11.3 95 367-495 112-207 (342)
106 3a8n_A TIAM-1, T-lymphoma inva 94.4 0.032 1.1E-06 61.4 5.1 116 207-336 7-123 (279)
107 2d9w_A Docking protein 2; PH d 94.2 0.29 9.9E-06 47.6 10.7 101 210-337 11-121 (127)
108 2f5t_X Archaeal transcriptiona 93.7 0.15 5.1E-06 54.8 8.6 56 367-435 3-59 (233)
109 3tfm_A Myosin X; split PH doma 91.4 0.25 8.7E-06 52.4 6.6 37 208-264 18-54 (228)
110 2c1l_A Restriction endonucleas 84.6 1.9 6.4E-05 46.3 7.5 80 817-941 63-145 (358)
111 1v5m_A SH2 and PH domain-conta 78.4 13 0.00044 36.4 10.3 81 245-335 40-128 (136)
112 1zc3_B Exocyst complex protein 63.7 59 0.002 30.6 11.2 78 249-336 27-106 (113)
113 3mpx_A FYVE, rhogef and PH dom 60.0 29 0.00099 39.7 10.1 78 246-336 257-336 (434)
114 1v61_A RAC/CDC42 guanine nucle 59.0 26 0.0009 34.1 8.0 81 248-337 45-126 (132)
115 3ml4_A Protein DOK-7; tyrosine 58.7 22 0.00077 37.6 7.9 34 302-335 78-111 (224)
116 2f5t_X Archaeal transcriptiona 53.0 23 0.0008 37.7 7.1 51 762-827 8-58 (233)
117 1q32_A TDP1P;, tyrosyl-DNA pho 29.7 27 0.00092 41.8 3.3 39 455-498 165-207 (544)
118 1mai_A Phospholipase C delta-1 28.4 1.5E+02 0.0052 28.1 7.9 35 302-336 84-120 (131)
119 3qwm_A Iqsec1, IQ motif and SE 25.2 3.5E+02 0.012 26.6 9.7 76 247-336 33-121 (140)
120 2lg1_A A-kinase anchor protein 22.0 1.9E+02 0.0066 29.3 7.6 82 246-336 85-171 (185)
121 2k8f_B Cellular tumor antigen 21.6 62 0.0021 24.5 2.6 16 979-994 9-24 (39)
122 3t06_A PDZ-rhogef, RHO guanine 21.3 2.1E+02 0.0073 32.2 8.7 89 246-338 309-409 (418)
No 1
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=100.00 E-value=4.6e-37 Score=366.09 Aligned_cols=160 Identities=21% Similarity=0.263 Sum_probs=115.5
Q ss_pred CCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEE-EcCCCCchhHHHHHHHHHHhhCC--cEEEEEEechhhh
Q 001322 362 GSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYL-RRPFHNHASSRLDALLEAKAKQG--VQIYILLYKEVAL 438 (1100)
Q Consensus 362 gn~v~~lvdG~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL-~rp~~~~~~~rL~~lL~~aA~rG--VkVrILl~d~~~~ 438 (1100)
++.+.++.+|+++|++|+++|++||++|+| ++|+ +++ +..+.+|.++|++||+|| |+||||+++ .+.
T Consensus 55 ~~~~~~~~~g~~~~~~l~~~I~~Ak~~I~i-------~~y~~~~~--d~~g~~i~~aL~~aa~rGp~V~Vril~D~-~g~ 124 (506)
T 1v0w_A 55 DDKCADRVGTKRLLAKMTENIGNATRTVDI-------STLAPFPN--GAFQDAIVAGLKESAAKGNKLKVRILVGA-APV 124 (506)
T ss_dssp CTTCCCCHHHHHHHHHHHHHHHTCSSEEEE-------EEESSCCC--HHHHHHHHHHHHHHHHTTCCEEEEEEEEC-CC-
T ss_pred CceeEEecCHHHHHHHHHHHHHHhccEEEE-------EEeeccCC--ChHHHHHHHHHHHHHhCCCCcEEEEEEeC-ccc
Confidence 455778889999999999999999999999 4555 353 556889999999999999 999999754 221
Q ss_pred H--hhcchhhhHHHhhc----cCCCeEEEE--cCCCcccCcccccCcceEEEEeCcEEEEccccCCCCCcCCCCCCCCCC
Q 001322 439 A--LKINSVYSKRKLLS----IHENVRVLR--YPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDN 510 (1100)
Q Consensus 439 ~--l~~~s~~~k~~L~~----l~~nI~V~r--~p~~~~~~~~~~~hHqKivVID~~vAfvGGiNL~~GRwDt~~H~l~D~ 510 (1100)
. ......+. +.|.. ..+++.+.. +... . ..+.+||+|++|||+++||+||+|++.++|+
T Consensus 125 ~~~~~~~~~~~-~~L~~~g~~~~~~~~~~~~~~~~~--~-~~~~r~H~K~~ViD~~~a~~Gg~Nl~~d~y~--------- 191 (506)
T 1v0w_A 125 YHMNVIPSKYR-DELTAKLGKAAENITLNVASMTTS--K-TAFSWNHSKILVVDGQSALTGGINSWKDDYL--------- 191 (506)
T ss_dssp -CCCCHHHHHH-HHHHHHHGGGGGGEEEEEEEECSB--T-TTTBCBCCCEEEETTTEEEEESCCCCHHHHT---------
T ss_pred cccccCCHHHH-HHHHhcccceeecCcccccccccc--C-CccccceeeEEEECCcEEEeeccccCccccc---------
Confidence 1 01112222 23332 123444431 1100 0 1224899999999999999999999644442
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHHHHhhhc
Q 001322 511 PPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAKR 577 (1100)
Q Consensus 511 ~~~~~pG~dY~n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gpaa~dl~~~F~qrWn~~~~ 577 (1100)
+. ..+|||++++++||+|.++++.|.++|+....
T Consensus 192 -----------~~----------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~ 225 (506)
T 1v0w_A 192 -----------DT----------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQ 225 (506)
T ss_dssp -----------SS----------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred -----------cC----------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhcc
Confidence 20 13899999999999999999999999998764
No 2
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=100.00 E-value=1.8e-33 Score=330.85 Aligned_cols=355 Identities=14% Similarity=0.114 Sum_probs=214.7
Q ss_pred CCCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhC--CcEEEEEEech---
Q 001322 361 DGSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQ--GVQIYILLYKE--- 435 (1100)
Q Consensus 361 ~gn~v~~lvdG~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~r--GVkVrILl~d~--- 435 (1100)
.||.++++.||.++|.+++++|++||++|+| ++|++.+ |..+..|.++|.+||+| ||+|+||+++.
T Consensus 25 ~~n~v~~l~~g~~~~~~l~~~I~~A~~~I~i-------~~~~~~~--d~~g~~l~~aL~~aa~r~~GV~Vril~D~~~~~ 95 (458)
T 3hsi_A 25 QAEQIEFLGSSAEFKTQIIELIRNAKKRIYV-------TALYWQK--DEAGQEILDEIYRVKQENPHLDVKVLIDWHRAQ 95 (458)
T ss_dssp CGGGEEECCCHHHHHHHHHHHHHTCSSEEEE-------EESCBCS--SHHHHHHHHHHHHHHHHSTTCEEEEEEETTGGG
T ss_pred cCCeEEEEeCHHHHHHHHHHHHHhcCCEEEE-------EEEEEec--CcHHHHHHHHHHHHHhcCCCCEEEEEEECcccc
Confidence 5899999999999999999999999999999 6677775 77789999999999999 99999997542
Q ss_pred ---hhhHhhc-chhhhHHHhhccCCCeEEE--Ec--CCCcccCcccccCcceEEEEeCcEEEEccccCCCCCcCCCCCCC
Q 001322 436 ---VALALKI-NSVYSKRKLLSIHENVRVL--RY--PDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKI 507 (1100)
Q Consensus 436 ---~~~~l~~-~s~~~k~~L~~l~~nI~V~--r~--p~~~~~~~~~~~hHqKivVID~~vAfvGGiNL~~GRwDt~~H~l 507 (1100)
+|+.... +..+. ..|.+.++||+|. .| |..+ ...+.++|+|++|||++++ +||+||
T Consensus 96 r~~~g~~~~~~~~~~~-~~L~~~g~nv~v~~~~f~~p~~~--~~~~~r~H~Ki~viD~~v~-~~G~Ni------------ 159 (458)
T 3hsi_A 96 RNLLGAEKSATNADWY-CEQRQTYQLPDDPNMFFGVPINT--REVFGVLHVKGFVFDDTVL-YSGASI------------ 159 (458)
T ss_dssp SCCC-----CCHHHHH-HHHHHHHTCTTCCCCEEEECSSS--SGGGCCEECCEEEETTEEE-EESCCB------------
T ss_pred ccccccccccccHHHH-HHHHhhCCCceEeeeecCCcccc--ccccCcceeeEEEECCCEE-EEeeec------------
Confidence 2221101 11122 3444445556655 44 5432 2356789999999999995 555999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHH--HHhhhcCCCCCCCC
Q 001322 508 GDNPPLIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQR--WNYAKRNKAPNEET 585 (1100)
Q Consensus 508 ~D~~~~~~pG~dY~n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gpaa~dl~~~F~qr--Wn~~~~~k~~~~~~ 585 (1100)
+++|++.. .....|+|+. +.||+++|....|+++ |+... .
T Consensus 160 ---------~d~y~~~~-------------------~~~~~drd~~--i~g~~~~D~~~~~~~~~~~~g~~--------v 201 (458)
T 3hsi_A 160 ---------NNVYLHQF-------------------EKYRYDRYQK--ITHAELADSMVNFINDYLLDFSA--------V 201 (458)
T ss_dssp ---------STTTTTCS-------------------SCCEECCEEE--EECHHHHHHHHHHHHHTTCCTTT--------C
T ss_pred ---------CHHHhcCC-------------------cccCcchhhh--hcCchHHHHHHHHHHhhhhcCcc--------c
Confidence 45676521 1113588844 8999999999999653 43110 0
Q ss_pred ccccCCccccccccccCCcchhhhcccccccccccccccccccccCccCCCCCCCCCCCccccCCCCCCcCCCCCccccc
Q 001322 586 IPLLMPQHQMVIPHYMGRSREVEVESKNVEDNSKSIKRQDSFTFRSSLQDIPLLLPQEPEVLDDSSRGLIPNGLDYTTTK 665 (1100)
Q Consensus 586 ~~~l~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~p~~~P~~~~~~~~~~~~~~~~~~~~~~~~ 665 (1100)
.++ +.. + .+.... . . ..
T Consensus 202 ~~l---------------------------------------------~~~-~-~~~~~~--------~-------~-~~ 218 (458)
T 3hsi_A 202 YPL---------------------------------------------DVT-N-RPRTKE--------I-------R-GN 218 (458)
T ss_dssp EES---------------------------------------------SSS-C-CCCGGG--------T-------H-HH
T ss_pred hhh---------------------------------------------HHH-h-cccchh--------h-------H-HH
Confidence 000 000 0 000000 0 0 00
Q ss_pred ccccccccccccccccCCCCCCcccCCCCCCcccccccccccCCCCCCCchhhhhhcccCCccCCCCccCCCCCCCCceE
Q 001322 666 SASFRYQKAKIEPVVTDMPMKGFVDDRDSPHHHLKTSLDVMTLPGTKSSDIEWWETQERGDQVGSTDETGQVGPRASCRC 745 (1100)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 745 (1100)
...+ +. ..... ..... .. ...+...+
T Consensus 219 ~~~~--~~-----~l~~~----------------------------------------~~~~~------~~-~~~~~~~~ 244 (458)
T 3hsi_A 219 IRAY--RK-----DLAQN----------------------------------------GEYSL------KS-AVKLPNVL 244 (458)
T ss_dssp HHHH--HH-----HHHHH----------------------------------------CCCCC------SS-CBSSCSSC
T ss_pred HHHH--HH-----hhhhc----------------------------------------ccccc------cc-cCCCCceE
Confidence 0000 00 00000 00000 00 00011224
Q ss_pred EEEecCCcccCCCcccHHHHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Q 001322 746 QIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVI 825 (1100)
Q Consensus 746 QilRS~~~WS~G~~~~E~sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVl 825 (1100)
|+..-+ |+...+..|..+|+++|.+|++.|||+++||+++. .+.+||..+ + .+||+|.||+
T Consensus 245 ~v~p~~-----~~~~~~~~i~~~~~~lI~~A~~~I~I~tpYf~p~~--------~~~~aL~~A----a--~rGV~VrIi~ 305 (458)
T 3hsi_A 245 SVSPLF-----GLGASGNELNQVIEDLFLQVQKKLVICTPYFNFPR--------TLQHKIATL----L--ENGKRVEIIV 305 (458)
T ss_dssp EEEEEE-----EESSSSCHHHHHHHHHHHTCSSEEEEECSSSCCCH--------HHHHHHHHH----H--TTTCEEEEEE
T ss_pred EEecCC-----CCCCchhHHHHHHHHHHHhcccEEEEEEeccCCCH--------HHHHHHHHH----H--HCCCeEEEEE
Confidence 554311 11123567999999999999999999999999972 566777644 3 3599999999
Q ss_pred cCCC--CCCCCCCCC--CchhHHHHHHHHHHHHhhhhHHHHHHHHHhcC---CCcccccccccccccccccCCCCccccc
Q 001322 826 PLLP--GFQGGVDDG--GAASVRAIMHWQYRTICRGQNSILHNLYALLG---PKTHDYISFYGLRAYGRLFEDGPVATSQ 898 (1100)
Q Consensus 826 P~~P--~F~G~~~~~--~~~s~r~im~~qyrtI~rG~~si~~~L~~~~G---~~~~~Yi~f~~Lr~~~~~~~~g~~vte~ 898 (1100)
|... +|-+.-+.+ ..++ + .+-|..+.+.-..-++.|.++ | +.+++| . .
T Consensus 306 ~~~~and~y~~~~~~~~~~~~-~---~~lye~~~~~f~~~~~~l~~~-G~i~V~i~~~-------------~-------~ 360 (458)
T 3hsi_A 306 GDKVANDFYIPPEQPFKMAGA-L---PYLYESNLRRFCEKFETQIES-GQLVVRLWRD-------------G-------D 360 (458)
T ss_dssp ECGGGSTTCCCTTSCCCGGGG-H---HHHHHHHHHHHHHHTHHHHHH-TSEEEEEECB-------------T-------T
T ss_pred CCccccCCccCCcchhhhhcc-h---HHHHHHhhhhhHHHHHHHHhC-CCeEEEEEec-------------C-------C
Confidence 9863 322111100 0111 1 111221111111113456663 6 433332 1 2
Q ss_pred eeeeeeEEEEeCcEEEEcccccCcCccCCCCCcceeEEEEcCc
Q 001322 899 VYVHSKVMIIDDSIALIGSANINDRSLLGSRDSEIGVLIEDKE 941 (1100)
Q Consensus 899 iyvHSKlmIVDD~~~iIGSANiN~RSm~G~~DsEi~v~I~d~~ 941 (1100)
.++|+|+|||||++++|||+|+|.||+ .+|.|++++|+|++
T Consensus 361 ~~lHaK~~vvD~~~~~vGS~N~d~RS~--~lN~E~~~~i~~~~ 401 (458)
T 3hsi_A 361 NTYHLKGVWVDDRYILLTGNNLNPRAW--RLDAENGLLIYDPQ 401 (458)
T ss_dssp BEECCCEEEETTTEEEEECCCCSHHHH--HTCEEEEEEEECTT
T ss_pred CceeEEEEEECCeEEEecCCCCCcchh--hhCceeEEEEeCCc
Confidence 399999999999999999999999999 59999999999986
No 3
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.85 E-value=3.7e-21 Score=234.79 Aligned_cols=141 Identities=18% Similarity=0.134 Sum_probs=106.2
Q ss_pred EEEecHHHHHHHHHHHHHhccc-----EEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEechhhhHh
Q 001322 366 QWFVDGKAAFEAIASSIEDAKS-----EIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALAL 440 (1100)
Q Consensus 366 ~~lvdG~~~f~al~~aI~~Ak~-----sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rGVkVrILl~d~~~~~l 440 (1100)
.++.++.+.|.++++.|++|++ +|+|+ +|++.+ +..+.++|++||++||+|+||+ +..+...
T Consensus 340 ~ll~~P~~sf~~v~~~I~~A~~dp~v~~I~it-------~Y~~~~-----d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~ 406 (687)
T 1xdp_A 340 VLLYYPYHTFEHVLELLRQASFDPSVLAIKIN-------IYRVAK-----DSRIIDSMIHAAHNGKKVTVVV-ELQARFD 406 (687)
T ss_dssp EEEEETTBCTHHHHHHHHHHHHCTTEEEEEEE-------ESSCCT-----TCHHHHHHHHHHHTTCEEEEEE-CTTCSST
T ss_pred EEEECchhhhhhHHHHHHHHhhCCcceEEEEE-------eeeecC-----cHHHHHHHHHHHhcCCEEEEEE-CCCcccc
Confidence 4777888889999999999997 99994 666643 3689999999999999999987 4433111
Q ss_pred -hcchhhhHHHhhccCCCeEEEEcCCCcccCcccccCcceEEEEe----CcE---EEEccccCCCCCcCCCCCCCCCCCC
Q 001322 441 -KINSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVD----YQI---CFIGGLDLCFGRYDTFEHKIGDNPP 512 (1100)
Q Consensus 441 -~~~s~~~k~~L~~l~~nI~V~r~p~~~~~~~~~~~hHqKivVID----~~v---AfvGGiNL~~GRwDt~~H~l~D~~~ 512 (1100)
..+..+. +.|.. +||+|..+.. .+++|+|++||| +++ ||+||.|+...
T Consensus 407 ~~~n~~~~-~~L~~--aGV~V~~~~~-------~~k~H~Ki~VID~re~~~i~~~a~iGS~N~d~r-------------- 462 (687)
T 1xdp_A 407 EEANIHWA-KRLTE--AGVHVIFSAP-------GLKIHAKLFLISRKENGEVVRYAHIGTGNFNEK-------------- 462 (687)
T ss_dssp TTTTTTTT-HHHHH--HTCEEEECCT-------TCEECCEEEEEEEEETTEEEEEEEEESSCSCTT--------------
T ss_pred hhhHHHHH-HHHHH--CCCEEEEecC-------CccccceEEEEEeccCCeEEEEEEEeCCcCCcc--------------
Confidence 1122333 34443 6899876532 246899999999 577 99999998300
Q ss_pred CCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEECh-HHHHHHHHHHHHHHhh
Q 001322 513 LIWPGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGP-PCRDVARHFVQRWNYA 575 (1100)
Q Consensus 513 ~~~pG~dY~n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gp-aa~dl~~~F~qrWn~~ 575 (1100)
....|+|+++.+.|| +|.++++.|...|+..
T Consensus 463 --------------------------------s~~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s 494 (687)
T 1xdp_A 463 --------------------------------TARLYTDYSLLTADARITNEVRRVFNFIENPY 494 (687)
T ss_dssp --------------------------------GGGTEEEEEEEECCHHHHHHHHHHHHHHHCTT
T ss_pred --------------------------------hhhhcceEEEEEeCHHHHHHHHHHHHHHHhhc
Confidence 012589999999987 6999999999999754
No 4
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.82 E-value=7.4e-20 Score=222.11 Aligned_cols=144 Identities=16% Similarity=0.147 Sum_probs=100.8
Q ss_pred EEEecHHHHHHHHHHHHHhccc-----EEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEechhhhHh
Q 001322 366 QWFVDGKAAFEAIASSIEDAKS-----EIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALAL 440 (1100)
Q Consensus 366 ~~lvdG~~~f~al~~aI~~Ak~-----sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rGVkVrILl~d~~~~~l 440 (1100)
.++.++.+.|.+++++|++|++ +|.+ ++|++.. +.+|.++|.+||++||+|+||+ | .++..
T Consensus 345 iLl~~p~~sf~~vi~~I~~A~~DP~V~sIk~-------tlYr~~~-----ds~Iv~ALi~AA~rGv~V~vLv-e-l~arf 410 (705)
T 2o8r_A 345 YLIHVPYYTYDYVVRLLMEAAISPDVSEIRL-------TQYRVAE-----NSSIISALEAAAQSGKKVSVFV-E-LKARF 410 (705)
T ss_dssp EEEEETTBCSHHHHHHHHHHHTCTTEEEEEE-------EESCCCS-----CCHHHHHHHHHHHTTCEEEEEE-C-CCSCC
T ss_pred eEeeChhHhHHHHHHHHHHhccCCCceEEEE-------EEEEEcC-----CHHHHHHHHHHHHCCCEEEEEE-e-CCCCc
Confidence 4788999999999999999999 9999 6888763 3789999999999999999997 5 33221
Q ss_pred h--cchhhhHHHhhccCCCeEEEEcCCCcccCcccccCcceEEEEeCc--EEEEccccCCCCCcCCCCCCCCCCCCCCCC
Q 001322 441 K--INSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQ--ICFIGGLDLCFGRYDTFEHKIGDNPPLIWP 516 (1100)
Q Consensus 441 ~--~~s~~~k~~L~~l~~nI~V~r~p~~~~~~~~~~~hHqKivVID~~--vAfvGGiNL~~GRwDt~~H~l~D~~~~~~p 516 (1100)
. -|..+. +.|.+ +||+|... ..++++|+|++|||++ ++ ||+. || -|.
T Consensus 411 dee~ni~wa-~~Le~--aGv~Vv~g-------~~~lk~H~Ki~lIdrr~~~~--g~~~----~y---~~i---------- 461 (705)
T 2o8r_A 411 DEENNLRLS-ERMRR--SGIRIVYS-------MPGLKVHAKTALILYHTPAG--ERPQ----GI---ALL---------- 461 (705)
T ss_dssp ----CHHHH-HHHHH--HTCEEEEC-------CTTCCBCCCEEEEEECCCSS--SCCC----EE---EEE----------
T ss_pred chhhhHHHH-HHHHH--CCCEEEEc-------cCCCCceeEEEEEecccccC--Ccee----EE---Eec----------
Confidence 1 134443 45553 69998642 1347899999999999 76 5541 11 000
Q ss_pred CCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEECh-HHHHHHHHHHHHH
Q 001322 517 GKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGP-PCRDVARHFVQRW 572 (1100)
Q Consensus 517 G~dY~n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gp-aa~dl~~~F~qrW 572 (1100)
|--.+|. .+.+ -|.|+++.+.+| ++.|++..|...|
T Consensus 462 gtGN~n~-------------------~tar-iy~D~~l~t~~~~i~~dl~~vF~~~t 498 (705)
T 2o8r_A 462 STGNFNE-------------------TTAR-IYSDTTLMTANTDIVHDVYRLFRILD 498 (705)
T ss_dssp ESSCSSC-------------------CCSS-CEEEEEEEECCHHHHHHHHHHHHHHT
T ss_pred cccceee-------------------eEEE-EEeeeeeeecChHHHHHHHHHHHHHh
Confidence 0001111 1122 488999999886 5699999995555
No 5
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.57 E-value=1.9e-15 Score=158.73 Aligned_cols=144 Identities=17% Similarity=0.180 Sum_probs=102.2
Q ss_pred CCeEEEEecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEechhhhHhh
Q 001322 362 GSQAQWFVDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALK 441 (1100)
Q Consensus 362 gn~v~~lvdG~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rGVkVrILl~d~~~~~l~ 441 (1100)
++....|.+|++.|.+|+++|++||++|+| ++|++. ...|.++|.+||+|||+||||+++... ..
T Consensus 35 ~~~~~~~~~~~~~~~~ll~~I~~A~~sI~i-------~~y~~~------~~~i~~aL~~aa~rGV~Vrii~D~~~~-~~- 99 (196)
T 4ggj_A 35 SGCPCSLPHSESSLSRLLRALLAARSSLEL-------CLFAFS------SPQLGRAVQLLHQRGVRVRVITDCDYM-AL- 99 (196)
T ss_dssp --CCCSSCCSCCHHHHHHHHHHTCSSEEEE-------EESCBC------CHHHHHHHHHHHHTTCEEEEEESSCCC----
T ss_pred CCceeecCCcHHHHHHHHHHHHHhheEEEE-------EEEEeC------CHHHHHHHHHHHHcCCcEEEEEecccc-cc-
Confidence 344556789999999999999999999999 577775 357999999999999999999743221 11
Q ss_pred cchhhhHHHhhccCCCeEEEEcCCCcccCcccccCcceEEEEeCcEEEEccccCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 001322 442 INSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYY 521 (1100)
Q Consensus 442 ~~s~~~k~~L~~l~~nI~V~r~p~~~~~~~~~~~hHqKivVID~~vAfvGGiNL~~GRwDt~~H~l~D~~~~~~pG~dY~ 521 (1100)
-.+.+ ..|. .+||+|..+.. ....|+|++|||++++++||.|++.. +
T Consensus 100 ~~~~~--~~l~--~~gi~v~~~~~-------~~~~H~K~~viD~~~~~~GS~N~t~~---------------------~- 146 (196)
T 4ggj_A 100 NGSQI--GLLR--KAGIQVRHDQD-------LGYMHHKFAIVDKKVLITGSLNWTTQ---------------------A- 146 (196)
T ss_dssp -CCHH--HHHH--HTTCEEEECCS-------SSCCCCEEEEETTTEEEEESCCBCHH---------------------H-
T ss_pred cHHHH--HHHH--hcCCCcccccc-------cccccCcEEEEcceEEEecCccCChh---------------------h-
Confidence 11212 2343 36899865422 13579999999999999999998410 0
Q ss_pred CCCCCCCCCccccccccccCCCCCCCCeEEEEEEEE-ChHHHHHHHHHHHHHHhhhc
Q 001322 522 NPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALW-GPPCRDVARHFVQRWNYAKR 577 (1100)
Q Consensus 522 n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~-Gpaa~dl~~~F~qrWn~~~~ 577 (1100)
+ ..-| +..+.+. +++|..+.+.|.+.|+....
T Consensus 147 -----------------~------~~n~-E~~~~i~~~~~~~~~~~~F~~~W~~~~p 179 (196)
T 4ggj_A 147 -----------------I------QNNR-ENVLIMEDTEYVRLFLEEFERIWEEFDP 179 (196)
T ss_dssp -----------------H------HHCC-EEEEEECCHHHHHHHHHHHHHHHHHTCC
T ss_pred -----------------h------cccc-eeEEEEECHHHHHHHHHHHHHHHHhCCC
Confidence 0 0012 3444454 56799999999999997643
No 6
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.47 E-value=1.8e-13 Score=136.71 Aligned_cols=143 Identities=17% Similarity=0.243 Sum_probs=103.6
Q ss_pred eEEEEe-cHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEechhhhHhhc
Q 001322 364 QAQWFV-DGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKI 442 (1100)
Q Consensus 364 ~v~~lv-dG~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rGVkVrILl~d~~~~~l~~ 442 (1100)
.++++. .+.+++..+.++|++|+++|+|+.+++ . ...|.++|.+|++|||+|+||+.+..... ..
T Consensus 4 ~v~~~f~p~~~~~~~~~~~i~~A~~~I~i~~~~~-------~------~~~i~~aL~~a~~rGV~Vril~~~~~~~~-~~ 69 (155)
T 1byr_A 4 SVQVGYSPEGSARVLVLSAIDSAKTSIRMMAYSF-------T------APDIMKALVAAKKRGVDVKIVIDERGNTG-RA 69 (155)
T ss_dssp EEEEEEETTTHHHHHHHHHHHHCSSEEEEEESSB-------C------CHHHHHHHHHHHHTTCEEEEEEESTTCCS-HH
T ss_pred ceEEEECCCCcHHHHHHHHHHHHhhEEEEEEEEe-------C------CHHHHHHHHHHHHCCCEEEEEEeCccccc-cc
Confidence 455555 456789999999999999999975433 2 25799999999999999999975433110 00
Q ss_pred chhhhHHHhhccCCCeEEEEcCCCcccCcccccCcceEEEEeCcEEEEccccCCCCCcCCCCCCCCCCCCCCCCCCCCCC
Q 001322 443 NSVYSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIWPGKDYYN 522 (1100)
Q Consensus 443 ~s~~~k~~L~~l~~nI~V~r~p~~~~~~~~~~~hHqKivVID~~vAfvGGiNL~~GRwDt~~H~l~D~~~~~~pG~dY~n 522 (1100)
+..+. ..|. .+|++|..+... ..+|.|++|||++++++||.|++..
T Consensus 70 ~~~~~-~~L~--~~gv~v~~~~~~-------~~~H~K~~iiD~~~~~iGS~N~~~~------------------------ 115 (155)
T 1byr_A 70 SIAAM-NYIA--NSGIPLRTDSNF-------PIQHDKVIIVDNVTVETGSFNFTKA------------------------ 115 (155)
T ss_dssp HHHHH-HHHH--HTTCCEEEECSS-------SCCCCCEEEETTTEEEEESCCBSHH------------------------
T ss_pred cHHHH-HHHH--HCCCeEEEcCCc-------ccccceEEEECCCEEEEECCCCCcc------------------------
Confidence 11111 2343 368887665321 2589999999999999999999510
Q ss_pred CCCCCCCCccccccccccCCCCCCCCeEEEEEEEECh--HHHHHHHHHHHHHHhhh
Q 001322 523 PRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGP--PCRDVARHFVQRWNYAK 576 (1100)
Q Consensus 523 ~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gp--aa~dl~~~F~qrWn~~~ 576 (1100)
....|++.++.+.|+ .|.++...|.+.|+.+.
T Consensus 116 ----------------------~~~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~~ 149 (155)
T 1byr_A 116 ----------------------AETKNSENAVVIWNMPKLAESFLEHWQDRWNQGR 149 (155)
T ss_dssp ----------------------HHHTSCEEEEEEESCHHHHHHHHHHHHHHHHTCE
T ss_pred ----------------------ccccCcccEEEEcCcHHHHHHHHHHHHHHHHhCC
Confidence 011467899999994 79999999999998653
No 7
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.46 E-value=2.3e-13 Score=135.99 Aligned_cols=118 Identities=21% Similarity=0.206 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecCCCCCCCCCCCCCchh
Q 001322 763 ESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAAS 842 (1100)
Q Consensus 763 ~sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~~P~F~G~~~~~~~~s 842 (1100)
.++.++++++|.+|+++|+|+++|| +. ..|.+||.++ ++ +||+|+|+++..+.. ..
T Consensus 13 ~~~~~~~~~~i~~A~~~I~i~~~~~-~~--------~~i~~aL~~a----~~--rGV~Vril~~~~~~~-------~~-- 68 (155)
T 1byr_A 13 GSARVLVLSAIDSAKTSIRMMAYSF-TA--------PDIMKALVAA----KK--RGVDVKIVIDERGNT-------GR-- 68 (155)
T ss_dssp THHHHHHHHHHHHCSSEEEEEESSB-CC--------HHHHHHHHHH----HH--TTCEEEEEEESTTCC-------SH--
T ss_pred CcHHHHHHHHHHHHhhEEEEEEEEe-CC--------HHHHHHHHHH----HH--CCCEEEEEEeCcccc-------cc--
Confidence 4799999999999999999999888 32 2566776544 33 499999999865321 00
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcCCCcccccccccccccccccCCCCccccceeeeeeEEEEeCcEEEEcccccCc
Q 001322 843 VRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANIND 922 (1100)
Q Consensus 843 ~r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi~f~~Lr~~~~~~~~g~~vte~iyvHSKlmIVDD~~~iIGSANiN~ 922 (1100)
...+.++.|.+ .|+++..+ . .. ..+|+|+|||||+++++||+|++.
T Consensus 69 --------------~~~~~~~~L~~-~gv~v~~~----~--------~~-------~~~H~K~~iiD~~~~~iGS~N~~~ 114 (155)
T 1byr_A 69 --------------ASIAAMNYIAN-SGIPLRTD----S--------NF-------PIQHDKVIIVDNVTVETGSFNFTK 114 (155)
T ss_dssp --------------HHHHHHHHHHH-TTCCEEEE----C--------SS-------SCCCCCEEEETTTEEEEESCCBSH
T ss_pred --------------ccHHHHHHHHH-CCCeEEEc----C--------Cc-------ccccceEEEECCCEEEEECCCCCc
Confidence 12245677777 48765432 0 11 278999999999999999999999
Q ss_pred CccCCCCCcceeEEEEcC
Q 001322 923 RSLLGSRDSEIGVLIEDK 940 (1100)
Q Consensus 923 RSm~G~~DsEi~v~I~d~ 940 (1100)
||+ ..+.|+++.|.+.
T Consensus 115 ~~~--~~n~E~~~~i~~~ 130 (155)
T 1byr_A 115 AAE--TKNSENAVVIWNM 130 (155)
T ss_dssp HHH--HTSCEEEEEEESC
T ss_pred ccc--ccCcccEEEEcCc
Confidence 999 4799999999984
No 8
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.38 E-value=4.9e-13 Score=141.86 Aligned_cols=144 Identities=15% Similarity=0.102 Sum_probs=101.2
Q ss_pred ecHHHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEechhhhHhhcchhhhH
Q 001322 369 VDGKAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSVYSK 448 (1100)
Q Consensus 369 vdG~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rGVkVrILl~d~~~~~l~~~s~~~k 448 (1100)
..+.+.++.|+++|++||++|+| ++|++. ...|.++|.+||+|||+||||+ |...... ..+.+
T Consensus 54 ~~~~~~~~~ii~~I~~A~~sI~i-------~~Y~~~------~~~I~~aL~~Aa~RGV~VRii~-D~~~~~~-~~~~~-- 116 (220)
T 4gel_A 54 HCSLRNVAKIVEQIDRAVYSIDL-------AIYTFT------SLFLADSIKRALQRGVIIRIIS-DGEMVYS-KGSQI-- 116 (220)
T ss_dssp TCHHHHHHHHHHHHHTCSSEEEE-------ECSCBC------CHHHHHHHHHHHHHTCEEEEEC-CTTTTTS-TTCHH--
T ss_pred cCcHHHHHHHHHHHHHhhhEEEE-------EEEEeC------CHHHHHHHHHHHHcCCeEEEEE-echhhhh-hHHHH--
Confidence 46788999999999999999999 577776 3679999999999999999997 4332211 11111
Q ss_pred HHhhccCCCeEEEEc-CCCc------------ccCcccccCcceEEEEeCcEEEEccccCCCCCcCCCCCCCCCCCCCCC
Q 001322 449 RKLLSIHENVRVLRY-PDHF------------ASGVYLWSHHEKLVIVDYQICFIGGLDLCFGRYDTFEHKIGDNPPLIW 515 (1100)
Q Consensus 449 ~~L~~l~~nI~V~r~-p~~~------------~~~~~~~~hHqKivVID~~vAfvGGiNL~~GRwDt~~H~l~D~~~~~~ 515 (1100)
..+. .+++.+... +... .....+.++|+|++|||++++++||+|++ ..
T Consensus 117 ~~~~--~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~~v~~GS~N~t-----~~------------ 177 (220)
T 4gel_A 117 SMLA--QLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYSIVISGSVNWT-----AL------------ 177 (220)
T ss_dssp HHHH--HTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCCEEEEESCCBS-----HH------------
T ss_pred HHHH--hcCCcEEeecccccccceeEEEcchhcccccccccceeccccccceEEecCcccc-----cc------------
Confidence 1222 234443322 1110 00123457788888888999999999984 00
Q ss_pred CCCCCCCCCCCCCCCccccccccccCCCCCCCCeEEEEEEEEChHHHHHHHHHHHHHHhhh
Q 001322 516 PGKDYYNPRESEPNSWEDTMRDELDRGKYPRMPWHDIHCALWGPPCRDVARHFVQRWNYAK 576 (1100)
Q Consensus 516 pG~dY~n~r~~d~~~~~~~~~~~ldr~~~~r~pWhDv~~~v~Gpaa~dl~~~F~qrWn~~~ 576 (1100)
. -...|.|+.+...|++|.++.+.|.+.|+...
T Consensus 178 ----------------------s------~~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~ 210 (220)
T 4gel_A 178 ----------------------G------LGGNWENCIITADDKLTATFQAEFQRMWRAFA 210 (220)
T ss_dssp ----------------------H------HHTSBEEEEEECCHHHHHHHHHHHHHHHHHSE
T ss_pred ----------------------c------cccCceEEEEEECHHHHHHHHHHHHHHHHhcc
Confidence 0 01257888888899999999999999999764
No 9
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.36 E-value=4.1e-13 Score=141.05 Aligned_cols=118 Identities=19% Similarity=0.165 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecCCCCCCCCCCCCCchhH
Q 001322 764 SIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAASV 843 (1100)
Q Consensus 764 sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~~P~F~G~~~~~~~~s~ 843 (1100)
+...+++++|.+|++.|+|+. |++++ ..|++||.++ ++ +||+|+||+...-. ..
T Consensus 46 ~~~~~ll~~I~~A~~sI~i~~-y~~~~--------~~i~~aL~~a----a~--rGV~Vrii~D~~~~-----~~------ 99 (196)
T 4ggj_A 46 SSLSRLLRALLAARSSLELCL-FAFSS--------PQLGRAVQLL----HQ--RGVRVRVITDCDYM-----AL------ 99 (196)
T ss_dssp CHHHHHHHHHHTCSSEEEEEE-SCBCC--------HHHHHHHHHH----HH--TTCEEEEEESSCCC-------------
T ss_pred HHHHHHHHHHHHhheEEEEEE-EEeCC--------HHHHHHHHHH----HH--cCCcEEEEEecccc-----cc------
Confidence 467889999999999999997 55554 2677777654 33 49999999963210 00
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhcCCCcccccccccccccccccCCCCccccceeeeeeEEEEeCcEEEEcccccCcC
Q 001322 844 RAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANINDR 923 (1100)
Q Consensus 844 r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi~f~~Lr~~~~~~~~g~~vte~iyvHSKlmIVDD~~~iIGSANiN~R 923 (1100)
..+.+..|.+ .|+++..+ . . ..++|+|+|||||+++++||+||+.+
T Consensus 100 --------------~~~~~~~l~~-~gi~v~~~---------~---~-------~~~~H~K~~viD~~~~~~GS~N~t~~ 145 (196)
T 4ggj_A 100 --------------NGSQIGLLRK-AGIQVRHD---------Q---D-------LGYMHHKFAIVDKKVLITGSLNWTTQ 145 (196)
T ss_dssp ---------------CCHHHHHHH-TTCEEEEC---------C---S-------SSCCCCEEEEETTTEEEEESCCBCHH
T ss_pred --------------cHHHHHHHHh-cCCCcccc---------c---c-------cccccCcEEEEcceEEEecCccCChh
Confidence 1123456777 48765322 0 1 12689999999999999999999999
Q ss_pred ccCCCCCcceeEEEEcCccc
Q 001322 924 SLLGSRDSEIGVLIEDKESV 943 (1100)
Q Consensus 924 Sm~G~~DsEi~v~I~d~~~~ 943 (1100)
|+. .|.|..+++.|++.+
T Consensus 146 ~~~--~n~E~~~~i~~~~~~ 163 (196)
T 4ggj_A 146 AIQ--NNRENVLIMEDTEYV 163 (196)
T ss_dssp HHH--HCCEEEEEECCHHHH
T ss_pred hhc--ccceeEEEEECHHHH
Confidence 994 899999999887643
No 10
>3p0c_A Nischarin; structural genomics, structural genomics consortium, SGC, PX signaling protein; 2.27A {Homo sapiens}
Probab=99.08 E-value=5.4e-10 Score=110.05 Aligned_cols=104 Identities=21% Similarity=0.342 Sum_probs=78.9
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~~ 124 (1100)
+++|++.+...+ +++|+|+++.+.-.|+|.|||+||..||.+|+.. .|+.
T Consensus 24 ~v~I~~~~~~~~------y~~Y~I~v~~~~~~~~V~RRYSdF~~L~~~L~~~-------------------~~~~----- 73 (130)
T 3p0c_A 24 EARVVGSELVDT------YTVYIIQVTDGSHEWTVKHRYSDFHDLHEKLVAE-------------------RKID----- 73 (130)
T ss_dssp EEEEEEEECSSS------SCEEEEEEECSSCEEEEEEEHHHHHHHHHHHHHT-------------------TSSC-----
T ss_pred EEEEEeccccCC------EEEEEEEEEECCeEEEEEehHHHHHHHHHHHHHH-------------------cCCC-----
Confidence 577777655433 7899999999999999999999999999988741 1110
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCccc-CCCCccHHHHHHHHHHHHHHHhhccccChhhhhhhhhccccC
Q 001322 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG-RQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKLS 203 (1100)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~-~~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~FLevS~~s 203 (1100)
.| .||. |..++ ....+.++||.+||.||+.|+..+.++.+..+.+||+.+.++
T Consensus 74 ----------------------~p---~lP~-K~~~g~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~s~~l~~FL~~~~~~ 127 (130)
T 3p0c_A 74 ----------------------KN---LLPP-KKIIGKNSRSLVEKREKDLEVYLQKLLAAFPGVTPRVLAHFLHFHFYE 127 (130)
T ss_dssp ----------------------TT---SCCC-CCCCSCCCSCSHHHHHHHHHHHHHHHHHTSCSEECHHHHHHHHSCTTC
T ss_pred ----------------------CC---CCCC-ccccccCCHHHHHHHHHHHHHHHHHHHcChhhhcCHHHHHHhCCCccc
Confidence 00 0222 23334 245667777889999999999999999999999999999887
Q ss_pred C
Q 001322 204 F 204 (1100)
Q Consensus 204 f 204 (1100)
+
T Consensus 128 ~ 128 (130)
T 3p0c_A 128 I 128 (130)
T ss_dssp -
T ss_pred c
Confidence 5
No 11
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.06 E-value=1.9e-10 Score=140.77 Aligned_cols=118 Identities=21% Similarity=0.310 Sum_probs=86.9
Q ss_pred HHHHHHHHhccc-----EEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecCCCCCCCCCCCCCch
Q 001322 767 CAYCSLIEKAEH-----FIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAA 841 (1100)
Q Consensus 767 ~ayl~aI~~A~h-----fIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~~P~F~G~~~~~~~~ 841 (1100)
++++++|++|++ .|+| ++||++.. ..|.+||.++ ++ +|++|+|++|..+.|.-. +
T Consensus 350 ~~v~~~I~~A~~dp~v~~I~i-t~Y~~~~d-------~~I~~AL~~A----A~--rGV~VrVLvd~~a~~~~~-----~- 409 (687)
T 1xdp_A 350 EHVLELLRQASFDPSVLAIKI-NIYRVAKD-------SRIIDSMIHA----AH--NGKKVTVVVELQARFDEE-----A- 409 (687)
T ss_dssp HHHHHHHHHHHHCTTEEEEEE-EESSCCTT-------CHHHHHHHHH----HH--TTCEEEEEECTTCSSTTT-----T-
T ss_pred hhHHHHHHHHhhCCcceEEEE-EeeeecCc-------HHHHHHHHHH----Hh--cCCEEEEEECCCcccchh-----h-
Confidence 467889999997 9999 89999432 2688888754 33 499999999987533210 0
Q ss_pred hHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCcccccccccccccccccCCCCccccceeeeeeEEEEe----CcE---EE
Q 001322 842 SVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIID----DSI---AL 914 (1100)
Q Consensus 842 s~r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi~f~~Lr~~~~~~~~g~~vte~iyvHSKlmIVD----D~~---~i 914 (1100)
..+.++.|.+ .|+.+..|. .+ ..+|+|+|||| |++ ++
T Consensus 410 ----------------n~~~~~~L~~-aGV~V~~~~-------------~~------~k~H~Ki~VID~re~~~i~~~a~ 453 (687)
T 1xdp_A 410 ----------------NIHWAKRLTE-AGVHVIFSA-------------PG------LKIHAKLFLISRKENGEVVRYAH 453 (687)
T ss_dssp ----------------TTTTTHHHHH-HTCEEEECC-------------TT------CEECCEEEEEEEEETTEEEEEEE
T ss_pred ----------------HHHHHHHHHH-CCCEEEEec-------------CC------ccccceEEEEEeccCCeEEEEEE
Confidence 1124567777 488765431 11 25999999999 455 99
Q ss_pred EcccccCcCccCCCCCcceeEEEEcCcc
Q 001322 915 IGSANINDRSLLGSRDSEIGVLIEDKES 942 (1100)
Q Consensus 915 IGSANiN~RSm~G~~DsEi~v~I~d~~~ 942 (1100)
|||+|+|.||+ ..++|+++.+.|++.
T Consensus 454 iGS~N~d~rs~--~~n~D~~l~i~~~~i 479 (687)
T 1xdp_A 454 IGTGNFNEKTA--RLYTDYSLLTADARI 479 (687)
T ss_dssp EESSCSCTTGG--GTEEEEEEEECCHHH
T ss_pred EeCCcCCcchh--hhcceEEEEEeCHHH
Confidence 99999999999 489999999998764
No 12
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=99.02 E-value=1.2e-09 Score=128.82 Aligned_cols=136 Identities=15% Similarity=0.183 Sum_probs=92.8
Q ss_pred ceEEEEecCCcccCCCcccHHHHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEE
Q 001322 743 CRCQIIRSVSQWSAGTSQLEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVI 822 (1100)
Q Consensus 743 ~~vQilRS~~~WS~G~~~~E~sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~ 822 (1100)
..++++.+ | + ....+++++|++|+++|||+..||.++ .+++.|.+++.+|+++++||+|+
T Consensus 27 n~v~~l~~------g----~-~~~~~l~~~I~~A~~~I~i~~~~~~~d---------~~g~~l~~aL~~aa~r~~GV~Vr 86 (458)
T 3hsi_A 27 EQIEFLGS------S----A-EFKTQIIELIRNAKKRIYVTALYWQKD---------EAGQEILDEIYRVKQENPHLDVK 86 (458)
T ss_dssp GGEEECCC------H----H-HHHHHHHHHHHTCSSEEEEEESCBCSS---------HHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CeEEEEeC------H----H-HHHHHHHHHHHhcCCEEEEEEEEEecC---------cHHHHHHHHHHHHHhcCCCCEEE
Confidence 35777754 2 2 589999999999999999999999876 56777777777888888899999
Q ss_pred EEecCCCCCCCCCCCCCchhHHHHHHHHHHHHhhhhHHHHHHHHHhcC-CCcc--cccccccccccccccCCCCccccce
Q 001322 823 IVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLG-PKTH--DYISFYGLRAYGRLFEDGPVATSQV 899 (1100)
Q Consensus 823 VVlP~~P~F~G~~~~~~~~s~r~im~~qyrtI~rG~~si~~~L~~~~G-~~~~--~Yi~f~~Lr~~~~~~~~g~~vte~i 899 (1100)
|+++...+.-|.++... . .+..+++..|.++.| +++. -|- +-++.. + ...
T Consensus 87 il~D~~~~~r~~~g~~~---~------------~~~~~~~~~L~~~g~nv~v~~~~f~--~p~~~~-~---------~~~ 139 (458)
T 3hsi_A 87 VLIDWHRAQRNLLGAEK---S------------ATNADWYCEQRQTYQLPDDPNMFFG--VPINTR-E---------VFG 139 (458)
T ss_dssp EEEETTGGGSCCC--------------------CCHHHHHHHHHHHHTCTTCCCCEEE--ECSSSS-G---------GGC
T ss_pred EEEECcccccccccccc---c------------cccHHHHHHHHhhCCCceEeeeecC--Cccccc-c---------ccC
Confidence 99997543222221100 0 112356788877533 5544 331 011111 1 123
Q ss_pred eeeeeEEEEeCcEEEEcccccCcCccC
Q 001322 900 YVHSKVMIIDDSIALIGSANINDRSLL 926 (1100)
Q Consensus 900 yvHSKlmIVDD~~~iIGSANiN~RSm~ 926 (1100)
..|.|++||||++++.| +||+++++.
T Consensus 140 r~H~Ki~viD~~v~~~G-~Ni~d~y~~ 165 (458)
T 3hsi_A 140 VLHVKGFVFDDTVLYSG-ASINNVYLH 165 (458)
T ss_dssp CEECCEEEETTEEEEES-CCBSTTTTT
T ss_pred cceeeEEEECCCEEEEe-eecCHHHhc
Confidence 79999999999997777 999999984
No 13
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.02 E-value=3.9e-10 Score=119.51 Aligned_cols=136 Identities=16% Similarity=0.064 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecCCCCCCCCCCCCCchh
Q 001322 763 ESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAAS 842 (1100)
Q Consensus 763 ~sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~~P~F~G~~~~~~~~s 842 (1100)
.+..+..+++|.+|++.|+|+. |++++ ..|++||.++. + +||+|+||+..... ..
T Consensus 57 ~~~~~~ii~~I~~A~~sI~i~~-Y~~~~--------~~I~~aL~~Aa----~--RGV~VRii~D~~~~-----~~----- 111 (220)
T 4gel_A 57 LRNVAKIVEQIDRAVYSIDLAI-YTFTS--------LFLADSIKRAL----Q--RGVIIRIISDGEMV-----YS----- 111 (220)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEC-SCBCC--------HHHHHHHHHHH----H--HTCEEEEECCTTTT-----TS-----
T ss_pred HHHHHHHHHHHHHhhhEEEEEE-EEeCC--------HHHHHHHHHHH----H--cCCeEEEEEechhh-----hh-----
Confidence 3566778999999999999996 66654 26777777543 3 39999999974321 10
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcCCCcccccccccccccccc--cCCCC-ccccceeeeeeEEEEeCcEEEEcccc
Q 001322 843 VRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRL--FEDGP-VATSQVYVHSKVMIIDDSIALIGSAN 919 (1100)
Q Consensus 843 ~r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi~f~~Lr~~~~~--~~~g~-~vte~iyvHSKlmIVDD~~~iIGSAN 919 (1100)
..+.+..|..+ |+....+.. ....|.++ .++.. ...-....|.|++|+|+.++++||+|
T Consensus 112 ---------------~~~~~~~~~~~-~~~~~~~~~--~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~~v~~GS~N 173 (220)
T 4gel_A 112 ---------------KGSQISMLAQL-GVPVRVPIT--TNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYSIVISGSVN 173 (220)
T ss_dssp ---------------TTCHHHHHHHT-TCCEEECCS--SSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCCEEEEESCC
T ss_pred ---------------hHHHHHHHHhc-CCcEEeecc--cccccceeEEEcchhcccccccccceeccccccceEEecCcc
Confidence 01123344442 443321100 00011100 00000 00012356777777778999999999
Q ss_pred cCcCccCCCCCcceeEEEEcCccc
Q 001322 920 INDRSLLGSRDSEIGVLIEDKESV 943 (1100)
Q Consensus 920 iN~RSm~G~~DsEi~v~I~d~~~~ 943 (1100)
++.+|+. .|.|..+++.|++++
T Consensus 174 ~t~~s~~--~N~E~~~vi~~~~~a 195 (220)
T 4gel_A 174 WTALGLG--GNWENCIITADDKLT 195 (220)
T ss_dssp BSHHHHH--TSBEEEEEECCHHHH
T ss_pred ccccccc--cCceEEEEEECHHHH
Confidence 9999995 799999999887644
No 14
>2ett_A Sorting nexin-22; PX domain, BC019655, SNX22_human, HS.157607, structural genomics,protein structure initiative PSI; NMR {Homo sapiens}
Probab=99.01 E-value=1.8e-09 Score=106.16 Aligned_cols=109 Identities=16% Similarity=0.225 Sum_probs=76.7
Q ss_pred CCC-eEEEeeeeecCC-CCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 001322 42 ELP-KASIVSVSRPDA-GDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMG 119 (1100)
Q Consensus 42 ~~~-~v~I~~ver~~s-~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~ 119 (1100)
|+| ++.+++.+-... ......+++|+|+++.+.-.|+|.|||+||..||.+|+.. +|+|
T Consensus 9 ~~~~~~~~vg~ev~Ip~~~~~~~~~~Y~I~v~~~~~~~~V~RRYSdF~~Lh~~L~~~-------------------~~iP 69 (128)
T 2ett_A 9 ELEVHIPSVGPEAEGPRQSPEKSHMVFRVEVLCSGRRHTVPRRYSEFHALHKRIKKL-------------------YKVP 69 (128)
T ss_dssp CEEEEEEEEESCCCCCSSCSSCCCCEEEEEEEETTEEEEEEEEHHHHHHHHHHHHTT-------------------SSCC
T ss_pred eecccccEEeeEEEeccccCCCCEEEEEEEEEECCcEEEEECCHHHHHHHHHHHHHH-------------------CCCC
Confidence 445 666666554111 1112347899999999999999999999999999988841 2332
Q ss_pred CCccccccCccccccccccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHhhccccChhhhhhhhhc
Q 001322 120 DHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEA 199 (1100)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~FLev 199 (1100)
+ ||. +......+.+.++||.+||.||+.|+..+.++ +..+.+||+.
T Consensus 70 ~--------------------------------lP~-K~~~~~~~~~ie~Rr~~Le~yL~~ll~~p~~~-s~~l~~FL~~ 115 (128)
T 2ett_A 70 D--------------------------------FPS-KRLPNWRTRGLEQRRQGLEAYIQGILYLNQEV-PKELLEFLRL 115 (128)
T ss_dssp C--------------------------------CCC-SSCCCSSSSCHHHHHHHHHHHHHHHHHHSSSS-CHHHHHHHTC
T ss_pred C--------------------------------CCC-CccCCCCHHHHHHHHHHHHHHHHHHHhCchhc-CHHHHHhcCC
Confidence 2 221 11111235567777889999999999887766 6899999999
Q ss_pred cccC
Q 001322 200 SKLS 203 (1100)
Q Consensus 200 S~~s 203 (1100)
+.++
T Consensus 116 ~~~~ 119 (128)
T 2ett_A 116 RHFP 119 (128)
T ss_dssp TTCC
T ss_pred ccCC
Confidence 9875
No 15
>4az9_A Sorting nexin-24; protein transport; 1.75A {Homo sapiens}
Probab=99.01 E-value=1.5e-09 Score=106.78 Aligned_cols=110 Identities=17% Similarity=0.216 Sum_probs=75.0
Q ss_pred cccCCCCeEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 001322 38 RIFDELPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLG 117 (1100)
Q Consensus 38 ~~~~~~~~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp 117 (1100)
..|.. -.|+|.+++...++. ...+++|+|+++.+.-+|+|.|||+||..||.+|+. ..|
T Consensus 18 ~~~~~-~~V~Ip~~~~~~~~~-~k~y~vY~I~v~~~~~~w~V~RRYsdF~~L~~~L~~-------------------~~~ 76 (129)
T 4az9_A 18 LYFQS-MEVYIPSFRYEESDL-ERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKK-------------------CIK 76 (129)
T ss_dssp CCCCC-CEEEEEEEEEECCTT-SCCEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHTT-------------------TSC
T ss_pred cccce-eEEEECcEEEEecCC-CCCEEEEEEEEEECCEEEEEEeeHHHHHHHHHHHHH-------------------hCC
Confidence 33433 367888765543322 124899999999999999999999999999998773 123
Q ss_pred CCCCccccccCccccccccccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHhhccccChhhhhhhh
Q 001322 118 MGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFL 197 (1100)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~FL 197 (1100)
+++ +|. +......+.+.++||..||.||+.||..+..+ +..+.+||
T Consensus 77 ~p~--------------------------------lP~-K~~~~~~~~~ie~Rr~~Le~yL~~ll~~~~~~-~~~l~~FL 122 (129)
T 4az9_A 77 TPE--------------------------------IPS-KHVRNWVPKVLEQRRQGLETYLQAVILENEEL-PKLFLDFL 122 (129)
T ss_dssp CCC--------------------------------CCC-SCCSCCCHHHHHHHHHHHHHHHHHHHHHCSSC-CHHHHHHT
T ss_pred CCC--------------------------------CCc-ccccCCCHHHHHHHHHHHHHHHHHHHhCchhh-CHHHHHHC
Confidence 212 121 11111234566777889999999999877754 67899999
Q ss_pred hcccc
Q 001322 198 EASKL 202 (1100)
Q Consensus 198 evS~~ 202 (1100)
++..+
T Consensus 123 ~~~~~ 127 (129)
T 4az9_A 123 NVRHL 127 (129)
T ss_dssp TC---
T ss_pred CCCCC
Confidence 98654
No 16
>1h6h_A Neutrophil cytosol factor 4; PX domain; HET: PIB; 1.7A {Homo sapiens} SCOP: d.189.1.1
Probab=98.98 E-value=1.4e-09 Score=108.66 Aligned_cols=115 Identities=18% Similarity=0.288 Sum_probs=83.4
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEe-eeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQY-KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMA 123 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~h-G~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~ 123 (1100)
+|+|+++++..+.. .+++|+|+++. +...|+|.|+|+||..||.+|+. . +|....
T Consensus 22 ~v~I~~~e~~~~~~---~~~vY~I~v~~~~~~~~~V~RRYsdF~~Lh~~L~~------------~-------~p~~~~-- 77 (143)
T 1h6h_A 22 SANIADIEEKRGFT---SHFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEE------------R-------FGPDSK-- 77 (143)
T ss_dssp EEEEEEEEEECSSS---CEEEEEEEEEETTSCEEEEEEEHHHHHHHHHHHHH------------H-------HSTTCS--
T ss_pred EEEEcCccccCCCC---CeEEEEEEEEEcCCCEEEEEeeHHHHHHHHHHHHH------------H-------Cccccc--
Confidence 79999998754432 47899999984 47899999999999999998874 1 221000
Q ss_pred ccccCccccccccccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHhhcc-ccChhhhhhhhhcccc
Q 001322 124 VVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLEASKL 202 (1100)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~~~~-~~~~~~l~~FLevS~~ 202 (1100)
...+.+.+|. ||. +..+++...+.++||..||.||+.|+..+. ++++..+.+||+.+..
T Consensus 78 ----------------~~~~~~~lP~---lP~-K~~~~~~~~~ie~Rr~~Le~yL~~ll~~p~~l~~s~~~~~Fl~~~~~ 137 (143)
T 1h6h_A 78 ----------------SSALACTLPT---LPA-KVYVGVKQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPY 137 (143)
T ss_dssp ----------------CGGGCCCCCC---CCC-CCCSSCHHHHHHHHHHHHHHHHHHHTTSCHHHHTCHHHHHHHSCCHH
T ss_pred ----------------cCCCCCCccc---CCC-CcccCcCHHHHHHHHHHHHHHHHHHHcCCHhhhcCHHHHHHhCCCcc
Confidence 0012234555 553 334455556777888999999999998887 7899999999998865
Q ss_pred C
Q 001322 203 S 203 (1100)
Q Consensus 203 s 203 (1100)
-
T Consensus 138 d 138 (143)
T 1h6h_A 138 D 138 (143)
T ss_dssp H
T ss_pred c
Confidence 3
No 17
>1kq6_A NCF-1, P47PHOX, neutrophil cytosol factor 1; alpha beta, PX domain, NADPH oxidase, protein binding; HET: MSE; 1.18A {Homo sapiens} SCOP: d.189.1.1 PDB: 1gd5_A 1o7k_A
Probab=98.97 E-value=2.2e-09 Score=107.04 Aligned_cols=129 Identities=12% Similarity=0.215 Sum_probs=88.0
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEe-eeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQY-KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMA 123 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~h-G~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~ 123 (1100)
+|+|+++|+....+ .+++|+|+++. +.-.|+|.|+|+||..||.+|+. .+|....
T Consensus 8 ~v~V~~~ek~~~~~---~~~~Y~I~V~~~~~~~~~V~RRYsdF~~Lh~~L~~-------------------~fp~~~g-- 63 (141)
T 1kq6_A 8 HIALLGFEKRFVPS---QHYVYMFLVKWQDLSEKVVYRRFTEIYEFHKTLKE-------------------MFPIEAG-- 63 (141)
T ss_dssp EEEEEEEEEECSSS---CEEEEEEEEEETTCCEEEEEECHHHHHHHHHHHHH-------------------HCTTTTT--
T ss_pred EEEEccEEEecCCC---CeEEEEEEEEEcCCCEEEEEecHHHHHHHHHHHHH-------------------HCchhhc--
Confidence 78999988633211 26789999996 34589999999999999998873 1442110
Q ss_pred ccccCccccccccccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHhhcc-ccChhhhhhhhhcccc
Q 001322 124 VVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLEASKL 202 (1100)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~~~~-~~~~~~l~~FLevS~~ 202 (1100)
. .....+.+|. ||. +..+++ ..+.+.|+..||.||+.||..+. ++++..+.+||+.++.
T Consensus 64 ~---------------~~~~~~~lP~---lP~-K~~~~~-~~~~e~Rr~~Le~YL~~Ll~~p~~i~~s~~v~~Fl~~~~~ 123 (141)
T 1kq6_A 64 A---------------INPENRIIPH---LPA-PKWFDG-QRAAENRQGTLTEYCSTLMSLPTKISRCPHLLDFFKVRPD 123 (141)
T ss_dssp S---------------SCGGGCCSCC---CCC-CCCCCS-HHHHHHHHHHHHHHHHHHTTSCHHHHTCHHHHHHHSCCHH
T ss_pred c---------------cCccccccCC---CCC-ccccCC-HHHHHHHHHHHHHHHHHHHhCCHhhcCChHHHHHhCCCcc
Confidence 0 0012344555 663 233444 56777778999999999998764 7899999999999988
Q ss_pred CCCCCCC--CCcceeeE
Q 001322 203 SFSPEYG--PKLKEDYV 217 (1100)
Q Consensus 203 sf~~~~g--~kgkeg~~ 217 (1100)
-+.+..+ .|-.|-||
T Consensus 124 d~~~~~~~~~~~~~~~~ 140 (141)
T 1kq6_A 124 DLKLPTDNQTKKPETYL 140 (141)
T ss_dssp HHSCCCCTTSCCCEEEE
T ss_pred ccCCCCCCcCCCcceee
Confidence 7655332 24444444
No 18
>1xte_A Serine/threonine-protein kinase SGK3; CISK, PX domain, transferase; 1.60A {Mus musculus} SCOP: d.189.1.1 PDB: 1xtn_A
Probab=98.93 E-value=1.8e-09 Score=109.28 Aligned_cols=109 Identities=16% Similarity=0.276 Sum_probs=81.5
Q ss_pred CCeEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCc
Q 001322 43 LPKASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHM 122 (1100)
Q Consensus 43 ~~~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~ 122 (1100)
.+.|+|.+++....+ ...+++|+|+++.+.-.|+|.|||+||..||.+|+. .++.. .+|+|+
T Consensus 7 ~~~v~I~~~~~~~~~--~~~~~~Y~I~v~~~~~~~~V~RRYsdF~~Lh~~L~~------------~~p~~--~~plP~-- 68 (154)
T 1xte_A 7 CPSVSIPSSDEHREK--KKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNSLKK------------QFPAM--ALKIPA-- 68 (154)
T ss_dssp CCEEEEEEEEEEEET--TEEEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHH------------HCGGG--CCCCCC--
T ss_pred CCEEEECCcEEEecC--CCCEEEEEEEEEECCEEEEEEeeHHHHHHHHHHHHH------------HCCCC--cccCCC--
Confidence 458999998864322 134889999999999999999999999999998884 11110 133222
Q ss_pred cccccCccccccccccccccccCCCCCCCCCCCCCCccc--CCCCccHHHHHHHHHHHHHHHhhccccChhhhhhhhhcc
Q 001322 123 AVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG--RQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEAS 200 (1100)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~--~~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~FLevS 200 (1100)
+..++ ....+.++||..||.||+.|+..+.++++..+..||+..
T Consensus 69 ----------------------------------K~~~g~~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~s~~l~~FL~~~ 114 (154)
T 1xte_A 69 ----------------------------------KRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMD 114 (154)
T ss_dssp ----------------------------------SCCSSCTTCHHHHHHHHHHHHHHHHHHTTCHHHHTSHHHHHHTTTT
T ss_pred ----------------------------------ccccCCCCCHHHHHHHHHHHHHHHHHHHcChhhccChHHHHHhCCC
Confidence 22233 234566777889999999999999999999999999987
Q ss_pred ccC
Q 001322 201 KLS 203 (1100)
Q Consensus 201 ~~s 203 (1100)
...
T Consensus 115 ~~~ 117 (154)
T 1xte_A 115 SPR 117 (154)
T ss_dssp CGG
T ss_pred CCc
Confidence 654
No 19
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.89 E-value=4.2e-09 Score=125.45 Aligned_cols=141 Identities=15% Similarity=0.169 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecCCCCCCCCCCCCCchh
Q 001322 763 ESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGAAS 842 (1100)
Q Consensus 763 ~sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~~P~F~G~~~~~~~~s 842 (1100)
.++..+++++|++|+++|||+..+|+.. + .++..|.+++++|+++|++|+|+|++...+.+.. . .
T Consensus 65 ~~~~~~l~~~I~~Ak~~I~i~~y~~~~~----d----~~g~~i~~aL~~aa~rGp~V~Vril~D~~g~~~~--~-----~ 129 (506)
T 1v0w_A 65 KRLLAKMTENIGNATRTVDISTLAPFPN----G----AFQDAIVAGLKESAAKGNKLKVRILVGAAPVYHM--N-----V 129 (506)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEESSCCC----H----HHHHHHHHHHHHHHHTTCCEEEEEEEECCC--CC--C-----C
T ss_pred HHHHHHHHHHHHHhccEEEEEEeeccCC----C----hHHHHHHHHHHHHHhCCCCcEEEEEEeCcccccc--c-----c
Confidence 4799999999999999999996553232 2 3455555566667776555999999986432110 0 0
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcCCCcccccccccccccccccCCCCccccceeeeeeEEEEeCcEEEEccccc-C
Q 001322 843 VRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSANI-N 921 (1100)
Q Consensus 843 ~r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi~f~~Lr~~~~~~~~g~~vte~iyvHSKlmIVDD~~~iIGSANi-N 921 (1100)
. ..+++..|.++ |+....++.+... .+... .. .....|.|++|||++++++||+|| +
T Consensus 130 ~--------------~~~~~~~L~~~-g~~~~~~~~~~~~-~~~~~--~~----~~~r~H~K~~ViD~~~a~~Gg~Nl~~ 187 (506)
T 1v0w_A 130 I--------------PSKYRDELTAK-LGKAAENITLNVA-SMTTS--KT----AFSWNHSKILVVDGQSALTGGINSWK 187 (506)
T ss_dssp H--------------HHHHHHHHHHH-HGGGGGGEEEEEE-EECSB--TT----TTBCBCCCEEEETTTEEEEESCCCCH
T ss_pred C--------------CHHHHHHHHhc-ccceeecCccccc-ccccc--CC----ccccceeeEEEECCcEEEeeccccCc
Confidence 0 12356677774 5544344433210 01100 00 112789999999999999999998 6
Q ss_pred cCccCC-CCCcceeEEEEcC
Q 001322 922 DRSLLG-SRDSEIGVLIEDK 940 (1100)
Q Consensus 922 ~RSm~G-~~DsEi~v~I~d~ 940 (1100)
++.+.. ..-.++.+.|+.+
T Consensus 188 d~y~~~~~~~~D~~v~i~G~ 207 (506)
T 1v0w_A 188 DDYLDTTHPVSDVDLALTGP 207 (506)
T ss_dssp HHHTSSSSCCBEEEEEEESH
T ss_pred cccccCCCCceEEEEEEECH
Confidence 666521 1226788888765
No 20
>2v6v_A BUD emergence protein 1; homotypic fusion, regulator, PI3P, 3-kinase, PX domain, SH3 domain, cytoskeleton, cell polarity; 1.5A {Saccharomyces cerevisiae} PDB: 2czo_A
Probab=98.81 E-value=1.7e-08 Score=102.48 Aligned_cols=124 Identities=18% Similarity=0.204 Sum_probs=85.5
Q ss_pred CC-eEEEeeeeecCCCCCCCceeEEEEEEEe-eeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Q 001322 43 LP-KASIVSVSRPDAGDISPMLLSYTIEVQY-KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGD 120 (1100)
Q Consensus 43 ~~-~v~I~~ver~~s~~~~~~~~~YtIEl~h-G~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~ 120 (1100)
.| +|.|.++...++ ..+|.|+++. +.-+|+|.|+|+||..||.+|+. .+|...
T Consensus 17 ~~~~~sI~~~~~~~~------~y~Y~I~V~~~d~~~~~V~RRYsdF~~Lh~~L~~-------------------~fP~e~ 71 (156)
T 2v6v_A 17 LLVKASVESFGLEDE------KYWFLVCCELSNGKTRQLKRYYQDFYDLQVQLLD-------------------AFPAEA 71 (156)
T ss_dssp CEEEEEEEEEEEETT------EEEEEEEEEETTSCEEEEEECHHHHHHHHHHHHH-------------------HCTTTT
T ss_pred cceEEEEeeEEEECC------EEEEEEEEEEcCCCEEEEEEEhHHHHHHHHHHHH-------------------Hcchhh
Confidence 35 799998876543 5679999998 45699999999999999998873 144211
Q ss_pred CccccccCccccccccccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHhhc-cccChhhhhhhhhc
Q 001322 121 HMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNM-DIVNSREVCKFLEA 199 (1100)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~~~-~~~~~~~l~~FLev 199 (1100)
. ...+ .....+++.+|. ||. +.+...+.+.+.|+..||.||+.||..+ .++.+..+..||+.
T Consensus 72 g--~~~~----------~~g~~~~~~lP~---LP~--K~~~~~~~~~e~Rr~~Le~YL~~Ll~lp~~i~~s~~v~~Ff~~ 134 (156)
T 2v6v_A 72 G--KLRD----------AGGQWSKRIMPY---IPG--PVPYVTNSITKKRKEDLNIYVADLVNLPDYISRSEMVHSLFVV 134 (156)
T ss_dssp T--CCBC----------TTCCBCCCCSCC---CCC--CCSSCCHHHHHHHHHHHHHHHHHHHTSCHHHHTSHHHHHTTSC
T ss_pred c--cccc----------ccccccccccCC---CCC--CcccCCHHHHHHHHHHHHHHHHHHHhCCccccCCHHHHHHhCC
Confidence 0 0000 000002344555 552 3334445677788899999999999855 47899999999999
Q ss_pred cccCCCCCC
Q 001322 200 SKLSFSPEY 208 (1100)
Q Consensus 200 S~~sf~~~~ 208 (1100)
++-.+.+++
T Consensus 135 ~~~D~~~~~ 143 (156)
T 2v6v_A 135 LNNGFDREF 143 (156)
T ss_dssp CSSSSCEEE
T ss_pred CCccccccc
Confidence 988766544
No 21
>3lui_A Sorting nexin-17, SNX17; PX domain, endosome, phosphoprotein, P transport, transport; 1.80A {Homo sapiens} PDB: 3fog_A
Probab=98.80 E-value=9.8e-09 Score=98.88 Aligned_cols=106 Identities=14% Similarity=0.183 Sum_probs=74.1
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~~ 124 (1100)
++.|.+++......-...+++|+|++. | .|+|.|+|+||..||.+|+. .++ ...+|+
T Consensus 5 ~v~Ip~~~~~~~~~g~~~y~~Y~I~v~-~--~~~V~RRYsdF~~L~~~L~~------------~~~----~~~~P~---- 61 (115)
T 3lui_A 5 HFSIPETESRSGDSGGSAYVAYNIHVN-G--VLHCRVRYSQLLGLHEQLRK------------EYG----ANVLPA---- 61 (115)
T ss_dssp CEEEEEEEEEC-----CCEEEEEEEET-T--EEEEEEEHHHHHHHHHHHHH------------HHC----STTSCC----
T ss_pred EEEECCeEEecCCCCCCCEEEEEEEEC-C--eEEEEecHHHHHHHHHHHHH------------HcC----CCcCCC----
Confidence 578888777443111124899999986 3 79999999999999998874 111 111112
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHhhccccChhhhhhhhhcccc
Q 001322 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEASKL 202 (1100)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~FLevS~~ 202 (1100)
||. +..++....+.+.||..||.||+.|+..+.++++..+.+||+.+..
T Consensus 62 ----------------------------lP~-K~~~~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~s~~~~~FL~~~~~ 110 (115)
T 3lui_A 62 ----------------------------FPP-KKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQ 110 (115)
T ss_dssp ----------------------------CCC-CCSSCCCHHHHHHHHHHHHHHHHHHHHSHHHHHCHHHHHHHHHHHH
T ss_pred ----------------------------CCC-CcccCCCHHHHHHHHHHHHHHHHHHHcChhhhcChHHHHHHCcCHH
Confidence 221 2223334456677788999999999999999999999999998764
No 22
>2ar5_A Phosphoinositide 3-kinase; PX domain, transferase; 1.80A {Homo sapiens} PDB: 2rea_A 2red_A
Probab=98.66 E-value=7.2e-08 Score=93.68 Aligned_cols=106 Identities=19% Similarity=0.340 Sum_probs=76.6
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEeeee--EEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQF--KWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHM 122 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG~f--kWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~ 122 (1100)
.|.|++.+.-..+. ...+|.|+++...- .|+|.|+|+||..||.+|+. . +|..
T Consensus 7 ~v~V~~~ek~~~~~---k~y~Y~I~v~~~~~~~~~~V~RRYseF~~Lh~~L~~------------~-------fp~~--- 61 (121)
T 2ar5_A 7 EVSVFTYHKKYNPD---KHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSI------------I-------FPLW--- 61 (121)
T ss_dssp EEEEEEEECCCSSS---SCCEEEEEEEETTCSSCEEEEEEHHHHHHHHHHHHH------------H-------SCGG---
T ss_pred EEEECcEEEEecCC---CcEEEEEEEEECCCceeEEEEEEHHHHHHHHHHHHH------------H-------CCCC---
Confidence 68899988743322 24569999999874 89999999999999998884 1 2210
Q ss_pred cccccCccccccccccccccccCCCCCCCCCCCCCCcccC--CCCccHHHHHHHHHHHHHHHhh-ccccChhhhhhhhhc
Q 001322 123 AVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR--QHSMSDRAKVAMQQYLNHFLGN-MDIVNSREVCKFLEA 199 (1100)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~--~~~~~~r~r~~LE~YL~~lL~~-~~~~~~~~l~~FLev 199 (1100)
.+|. ||. +..+++ ...+.++|+..||.||+.||.. +.++++..+..||+.
T Consensus 62 -----------------------~lP~---lP~-K~~~g~~~~~~~~e~Rr~~Le~yL~~ll~~p~~i~~s~~v~~Ff~~ 114 (121)
T 2ar5_A 62 -----------------------KLPG---FPN-RMVLGRTHIKDVAAKRKIELNSYLQSLMNASTDVAECDLVCTFFHG 114 (121)
T ss_dssp -----------------------GSCC---CCC-CCCSSSSSTTHHHHHHHHHHHHHHHHHHTSCHHHHTSHHHHHHTSS
T ss_pred -----------------------CCCC---CCC-CeecCccCcHHHHHHHHHHHHHHHHHHHhCCchhcCCHHHHHHcCC
Confidence 0111 332 233443 2357778889999999999986 568899999999998
Q ss_pred ccc
Q 001322 200 SKL 202 (1100)
Q Consensus 200 S~~ 202 (1100)
|..
T Consensus 115 ~~~ 117 (121)
T 2ar5_A 115 SHH 117 (121)
T ss_dssp SCC
T ss_pred ccc
Confidence 864
No 23
>2csk_A Sorting nexin 12; SNX12, PX domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.63 E-value=9.6e-08 Score=95.66 Aligned_cols=116 Identities=16% Similarity=0.254 Sum_probs=77.5
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEee-----eeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYK-----QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMG 119 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG-----~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~ 119 (1100)
.+.|.+.+....+ ...+++|+|+++.+ .-.|+|.|+|+||..||.+|+.. ..+.+|
T Consensus 12 ~i~V~dp~~~~~g--~~~yv~Y~I~v~~~~~~~~~~~~~V~RRYsdF~~L~~~L~~~-----------------~~~~iP 72 (146)
T 2csk_A 12 EIDIFNPQTVGVG--RARFTTYEVRMRTNLPIFKLKESCVRRRYSDFEWLKNELERD-----------------SKIVVP 72 (146)
T ss_dssp EEEEEEEEEESSS--SSCEEEEEEEEECCCSSSSCSEEEEEECHHHHHHHHHHHSSS-----------------SSCCCC
T ss_pred EEEEcCceEecCC--CCCEEEEEEEEEECCCCcCcCceEEEecHHHHHHHHHHHHhc-----------------cCCcCC
Confidence 6788887764443 23488999999865 45899999999999999988741 011121
Q ss_pred CCccccccCccccccccccccccccCCCCCCCCCCCCCCccc-CCCCccHHHHHHHHHHHHHHHhhccccChhhhhhhhh
Q 001322 120 DHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG-RQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLE 198 (1100)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~-~~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~FLe 198 (1100)
+..++. +- ..++- ....+ ..+.+.++||..||.||+.|+..+.++++..+..||+
T Consensus 73 ~lP~K~---------------------~~--~~~~~-~~~~g~~~~~fie~Rr~~Le~fL~~l~~~p~l~~s~~l~~FL~ 128 (146)
T 2csk_A 73 PLPGKA---------------------LK--RQLPF-RGDEGIFEESFIEERRQGLEQFINKIAGHPLAQNERCLHMFLQ 128 (146)
T ss_dssp CCSCCC---------------------CC--CSSTT-CCCSSCCCHHHHHHHHHHHHHHHHHHHHCHHHHHCHHHHHHTT
T ss_pred CCCCCc---------------------hh--hcccc-ccccCCCCHHHHHHHHHHHHHHHHHHHcChhhccCcHHHhhcC
Confidence 210110 00 00000 11112 2345667778899999999999999999999999999
Q ss_pred ccccC
Q 001322 199 ASKLS 203 (1100)
Q Consensus 199 vS~~s 203 (1100)
...+.
T Consensus 129 ~~~~~ 133 (146)
T 2csk_A 129 EEAID 133 (146)
T ss_dssp CSSCC
T ss_pred CCchh
Confidence 88663
No 24
>2i4k_A Sorting nexin-1, SNX1; 3-stranded beta sheet, 3 alpha helices, proline rich loop, protein transport; NMR {Homo sapiens}
Probab=98.63 E-value=1e-08 Score=99.98 Aligned_cols=114 Identities=14% Similarity=0.305 Sum_probs=73.8
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEe-----eeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQY-----KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMG 119 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~h-----G~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~ 119 (1100)
+|+|.+.++...+ ...+++|+|+++. +.-.|+|.|+|+||..||.+|+. .+.. ...-+|
T Consensus 5 ~v~V~~~~~~~~g--~~~~~~Y~I~v~~~~~~~~~~~~~V~RRYsdF~~L~~~L~~------------~~~~--~~~~iP 68 (128)
T 2i4k_A 5 TVGITDPEKIGDG--MNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSE------------KHSQ--NGFIVP 68 (128)
T ss_dssp CCCBCCCCBCCCS--SCCCBCCCBCCCCCSSSSCSSCCCBCCCHHHHHHHHHHHHH------------TCSS--SSCCCC
T ss_pred EEEECCceEecCC--CcCEEEEEEEEEEcCCCCCCCeEEEEeEhHHHHHHHHHHHH------------hCCC--CCcCcC
Confidence 4667776664433 1347899999986 36799999999999999998874 0000 001111
Q ss_pred CCccccccCccccccccccccccccCCCCCCCCCCCCCCccc----CCCCccHHHHHHHHHHHHHHHhhccccChhhhhh
Q 001322 120 DHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG----RQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCK 195 (1100)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~----~~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~ 195 (1100)
+. |....+...+..++ ..+.+.++||.+||.||+.|+..+.++++..+..
T Consensus 69 ~l--------------------------P~K~~~~~~~~~~~~~~~~~~~~ie~Rr~~Le~fL~~l~~~p~l~~s~~~~~ 122 (128)
T 2i4k_A 69 PP--------------------------PEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVRE 122 (128)
T ss_dssp SS--------------------------SSCCSSSSSSCCCCSCCCSSTTHHHHHHHHHHHHHHHHHHCHHHHCSHHHHT
T ss_pred CC--------------------------CCCcccchhhhhhcCCCCCCHHHHHHHHHHHHHHHHHHHcCcccccChHHHH
Confidence 11 11000000000011 1345667778899999999999999999999999
Q ss_pred hhhcc
Q 001322 196 FLEAS 200 (1100)
Q Consensus 196 FLevS 200 (1100)
||+.+
T Consensus 123 FL~~~ 127 (128)
T 2i4k_A 123 FLEKE 127 (128)
T ss_dssp TTTCC
T ss_pred hhCCC
Confidence 99865
No 25
>2iwl_X Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha polypeptide; PI3K, PX domain, transferase; 2.6A {Homo sapiens}
Probab=98.61 E-value=9.4e-08 Score=95.16 Aligned_cols=107 Identities=18% Similarity=0.315 Sum_probs=74.3
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEeeee--EEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQF--KWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHM 122 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG~f--kWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~ 122 (1100)
.|.|.+++....++ .+.+|.|+++...- .|+|.|+|+||..||.+|+. . +|..
T Consensus 22 ~v~I~~~ek~~~~~---k~~~Y~I~V~~~~~~~~~~V~RRYseF~~Lh~~L~~------------~-------fp~~--- 76 (140)
T 2iwl_X 22 EVSVFTYHKKYNPD---KHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSI------------I-------FPLW--- 76 (140)
T ss_dssp EEEEEEEEECCSSS---SCEEEEEEEEETTCSSCEEEEECHHHHHHHHHHHHH------------H-------SCGG---
T ss_pred EEEECcEEEEecCC---CeEEEEEEEEECCCceeEEEEeEHHHHHHHHHHHHH------------H-------CcCc---
Confidence 78999988754332 25679999999875 89999999999999998884 1 2210
Q ss_pred cccccCccccccccccccccccCCCCCCCCCCCCCCcccC--CCCccHHHHHHHHHHHHHHHhh-ccccChhhhhhhhhc
Q 001322 123 AVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR--QHSMSDRAKVAMQQYLNHFLGN-MDIVNSREVCKFLEA 199 (1100)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~--~~~~~~r~r~~LE~YL~~lL~~-~~~~~~~~l~~FLev 199 (1100)
.+|. ||. +..+++ ...+.++||..||.||+.||.. ..++++..+.+||+.
T Consensus 77 -----------------------~lP~---lP~-K~~~~~~~~~~~~e~Rr~~Le~yL~~Ll~~~~~i~~s~~v~~Fl~~ 129 (140)
T 2iwl_X 77 -----------------------KLPG---FPN-RMVLGRTHIKDVAAKRKIELNSYLQSLMNASTDVAECDLVCTFFHP 129 (140)
T ss_dssp -----------------------GSCC---CCC-----------CCCCHHHHHHHHHHHHHTTSCHHHHTSHHHHHHHSC
T ss_pred -----------------------cCCC---CCC-CeecCccchHHHHHHHHHHHHHHHHHHHhCCHhhhcCHHHHHHhCC
Confidence 0111 332 223332 3456677788999999999984 568899999999998
Q ss_pred cccC
Q 001322 200 SKLS 203 (1100)
Q Consensus 200 S~~s 203 (1100)
++.-
T Consensus 130 ~~~D 133 (140)
T 2iwl_X 130 LLRD 133 (140)
T ss_dssp CTTT
T ss_pred CCCC
Confidence 7654
No 26
>2v14_A Kinesin-like motor protein C20ORF23; plus-END kinesin complex, transport protein, phosphatidylinositol 3-phosphate binding, nucleotide-binding; 2.20A {Homo sapiens}
Probab=98.61 E-value=1.3e-07 Score=93.49 Aligned_cols=96 Identities=20% Similarity=0.332 Sum_probs=67.8
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~~ 124 (1100)
+|.|.+++....+. ..+++|+|+++.+.-.|+|.|+|+||..||.+|+. .+.. +...|
T Consensus 7 ~VsIp~~~~~~~~~--~~~~~Y~I~v~~~~~~~~V~RRYsdF~~L~~~L~~------------~~p~-~~~p~------- 64 (134)
T 2v14_A 7 KISIPRYVLCGQGK--DAHFEFEVKITVLDETWTVFRRYSRFREMHKTLKL------------KYAE-LAALE------- 64 (134)
T ss_dssp EEEEEEEEEESSTT--SCEEEEEEEEEETTEEEEEEECHHHHHHHHHHHHH------------HCGG-GGGCC-------
T ss_pred EEEECcEEEEecCC--CCEEEEEEEEEECCeEEEEEeeHHHHHHHHHHHHH------------HCCC-CCCCC-------
Confidence 78888887754432 24789999999999999999999999999998884 1111 10112
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCcccC-CCCccHHHHHHHHHHHHHHHhhcc-ccChh
Q 001322 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR-QHSMSDRAKVAMQQYLNHFLGNMD-IVNSR 191 (1100)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~-~~~~~~r~r~~LE~YL~~lL~~~~-~~~~~ 191 (1100)
||. +..+++ .+.+.++||..||.||+.|+..+. ++++.
T Consensus 65 ----------------------------lP~-K~~~~~~~~~~ie~Rr~~Le~yL~~ll~~~~~l~~sp 104 (134)
T 2v14_A 65 ----------------------------FPP-KKLFGNKDERVIAERRSHLEKYLRDFFSVMLQSATSP 104 (134)
T ss_dssp ----------------------------CCC-CCSSCTTSHHHHHHHHHHHHHHHHHHHHHHHHCTTST
T ss_pred ----------------------------CcC-CccccCCCHHHHHHHHHHHHHHHHHHHhChHhhcCCH
Confidence 221 223332 345677778899999999998775 55554
No 27
>1ocs_A Sorting nexin GRD19; sorting protein, PX-domain, yeast protein; HET: CME; 2.03A {Saccharomyces cerevisiae} SCOP: d.189.1.1 PDB: 1ocu_A*
Probab=98.57 E-value=2.6e-07 Score=94.29 Aligned_cols=113 Identities=18% Similarity=0.273 Sum_probs=77.1
Q ss_pred eEEEeeeeecCC-C-CCCCceeEEEEEEEe-----eeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Q 001322 45 KASIVSVSRPDA-G-DISPMLLSYTIEVQY-----KQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLG 117 (1100)
Q Consensus 45 ~v~I~~ver~~s-~-~~~~~~~~YtIEl~h-----G~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp 117 (1100)
.|.|.+.+.... + +....+++|+|+++. +.-.|+|.|||+||..||.+|+.. +. +...|
T Consensus 37 ~i~V~dp~~~~~~g~~~~~~yv~Y~I~v~~~~~~f~~~~~~V~RRYsdF~~Lh~~L~~~------------~~--~~~~p 102 (162)
T 1ocs_A 37 EIEVHNPKTHIPNGMDSKGMFTDYEIICRTNLPSFHKRVSKVRRRYSDFEFFRKCLIKE------------IS--MLNHP 102 (162)
T ss_dssp EEEEEEEEEECCCSTTSCCCEEEEEEEEEECCTTCSCSEEEEEEEHHHHHHHHHHHHHH------------HH--HTTCT
T ss_pred EEEEeCCEEeeccCCCCCCCeEEEEEEEEECCCCCCcceeEEEeeHHHHHHHHHHHHHH------------hc--cccCC
Confidence 688888777521 2 223358999999986 456899999999999999988741 10 00001
Q ss_pred CCCCccccccCccccccccccccccccCCCCCCCCCCCCCCccc--CCCCccHHHHHHHHHHHHHHHhhccccC-hhhhh
Q 001322 118 MGDHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALG--RQHSMSDRAKVAMQQYLNHFLGNMDIVN-SREVC 194 (1100)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~--~~~~~~~r~r~~LE~YL~~lL~~~~~~~-~~~l~ 194 (1100)
. ..+|. ||. |..++ ..+.+.++||..||.||+.++..+.+++ +..+.
T Consensus 103 --~------------------------~~iP~---lP~-K~~~~~~~~~~fie~Rr~~Le~fL~~l~~~p~l~~~s~~l~ 152 (162)
T 1ocs_A 103 --K------------------------VMVPH---LPG-KILLSNRFSNEVIEERRQGLNTWMQSVAGHPLLQSGSKVLV 152 (162)
T ss_dssp --T------------------------CCCCC---CTT-CCCSSCTTSHHHHHHHHHHHHHHHHHHHTCHHHHHHCHHHH
T ss_pred --C------------------------ccCCC---CCC-CcccccCCCHHHHHHHHHHHHHHHHHHHcCHHhhhCCHHHH
Confidence 0 01111 332 22232 1455667778899999999999999987 89999
Q ss_pred hhhhccc
Q 001322 195 KFLEASK 201 (1100)
Q Consensus 195 ~FLevS~ 201 (1100)
.||+...
T Consensus 153 ~FL~~~~ 159 (162)
T 1ocs_A 153 RFIEAEK 159 (162)
T ss_dssp HHHHCSS
T ss_pred HhCCCcc
Confidence 9999764
No 28
>3iq2_A Sorting nexin-7; SNX7, PHOX, protein signalling, SGC, structur genomics consortium, protein transport, transport; 1.70A {Homo sapiens}
Probab=98.57 E-value=2.4e-07 Score=92.14 Aligned_cols=108 Identities=12% Similarity=0.184 Sum_probs=76.2
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEee-----eeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYK-----QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMG 119 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG-----~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~ 119 (1100)
.|.|.+.+....+. ..+++|+|+++.. .-.|+|.|+|+||..||.+|+. .+ ..+.+|
T Consensus 10 ~i~V~dp~~~~~g~--~~yv~Y~I~v~t~~~~f~~~~~~V~RRYsdF~~L~~~L~~------------~~----p~~~iP 71 (138)
T 3iq2_A 10 FITVDEPESHVTTI--ETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEE------------AH----PTLIIP 71 (138)
T ss_dssp EEEEEEEEEEECSS--CEEEEEEEEEESCSSSSSCCEEEEEEEHHHHHHHHHHHHH------------HC----TTSCCC
T ss_pred EEEECCCEEecCCC--CCEEEEEEEEEECCCCcCCCeEEEEcChHHHHHHHHHHHH------------HC----cCcccC
Confidence 57777766643322 3589999999864 3489999999999999998874 11 111121
Q ss_pred CCccccccCccccccccccccccccCCCCCCCCCCCCCCcc----c-CCCCccHHHHHHHHHHHHHHHhhccccChhhhh
Q 001322 120 DHMAVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPAL----G-RQHSMSDRAKVAMQQYLNHFLGNMDIVNSREVC 194 (1100)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l----~-~~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~ 194 (1100)
+ ||. +..+ + ..+.+.++||+.||.||+.++..+.++++..+.
T Consensus 72 ~--------------------------------lP~-K~~~~~~~~~~~~~fie~Rr~~Le~fL~~l~~~p~l~~s~~~~ 118 (138)
T 3iq2_A 72 P--------------------------------LPE-KFIVKGMVERFNDDFIETRRKALHKFLNRIADHPTLTFNEDFK 118 (138)
T ss_dssp C--------------------------------CCC-CC----CCGGGCHHHHHHHHHHHHHHHHHHHHSTTGGGCHHHH
T ss_pred C--------------------------------CCc-chhhccccccCCHHHHHHHHHHHHHHHHHHHcCHhhhcChHHH
Confidence 2 221 1111 1 134566677889999999999999999999999
Q ss_pred hhhhccccC
Q 001322 195 KFLEASKLS 203 (1100)
Q Consensus 195 ~FLevS~~s 203 (1100)
.||+.....
T Consensus 119 ~FL~~~~~~ 127 (138)
T 3iq2_A 119 IFLTAQAWE 127 (138)
T ss_dssp HHHHTTCBC
T ss_pred hhhCCCCCC
Confidence 999987764
No 29
>2l73_A NADPH oxidase organizer 1; cell membrane, PX domain, oxidoreductase regulator; NMR {Homo sapiens}
Probab=98.55 E-value=1.9e-07 Score=94.10 Aligned_cols=123 Identities=16% Similarity=0.213 Sum_probs=83.1
Q ss_pred CeEEEeeeeecCCCCCCCceeEEEEEEEee-eeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCc
Q 001322 44 PKASIVSVSRPDAGDISPMLLSYTIEVQYK-QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHM 122 (1100)
Q Consensus 44 ~~v~I~~ver~~s~~~~~~~~~YtIEl~hG-~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~ 122 (1100)
+.|.|++.+.--... ..+++|.|+++.- .=.|+|.|+|+||..||.+|+. . +|...
T Consensus 9 ~~v~v~~~ek~~~~~--~~y~~Y~I~V~~~d~~~~~V~RRYseF~~Lh~~L~~------------~-------FP~e~-- 65 (149)
T 2l73_A 9 PRYPVSVQGAALVQI--KRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKKTLKE------------T-------FPVEA-- 65 (149)
T ss_dssp CCCEEEEEEEEEECC--SSSCEEEEEEEETTSCEEEEEEEHHHHHHHHHHHHH------------H-------CGGGG--
T ss_pred eEEEEEeeeEeecCC--CceEEEEEEEEEeCCCEEEEEEehHHHHHHHHHHHH------------H-------Cchhh--
Confidence 578888877722111 1366799999953 4579999999999999998884 1 33100
Q ss_pred cccccCccccccccccccccccCCCCCCCCCCCCCCcccC--CCCccHHHHHHHHHHHHHHHhhcc-ccChhhhhhhhhc
Q 001322 123 AVVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR--QHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLEA 199 (1100)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~--~~~~~~r~r~~LE~YL~~lL~~~~-~~~~~~l~~FLev 199 (1100)
.....++|.+|. ||. +..+++ ...+.+.|+..||.||+.||..+. ++.+..+..||..
T Consensus 66 ---------------~~~~~~~r~lP~---lP~-k~~~~~~~~~~~~e~R~~~Le~YL~~Ll~lp~~i~~s~~v~~Ff~~ 126 (149)
T 2l73_A 66 ---------------GLLRRSDRVLPK---LLD-APLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFAP 126 (149)
T ss_dssp ---------------SSSCSSCCSSCC---CCC-CSCCSSCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHSHHHHHHHSC
T ss_pred ---------------cccccccccccC---CCC-CeeeccccchHHHHHHHHHHHHHHHHHHhCCccccCCHHHHHHhCC
Confidence 000113455666 553 222332 234667778999999999998765 7899999999999
Q ss_pred cccCCCCCC
Q 001322 200 SKLSFSPEY 208 (1100)
Q Consensus 200 S~~sf~~~~ 208 (1100)
++--+.+++
T Consensus 127 ~~~D~~~~~ 135 (149)
T 2l73_A 127 QPLDLEPAL 135 (149)
T ss_dssp CGGGGSSSC
T ss_pred CccccCccC
Confidence 987665443
No 30
>1kmd_A VAM7P, vacuolar morphogenesis protein VAM7; PX domain, phosphoinositide binding, endocytosis/exocytosis complex; NMR {Saccharomyces cerevisiae} SCOP: d.189.1.1
Probab=98.50 E-value=1.2e-07 Score=91.50 Aligned_cols=98 Identities=21% Similarity=0.393 Sum_probs=69.1
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~~ 124 (1100)
.|.|.+++. . ..+++|+|++ + .|+|.|+|+||..||.+|+. .+.. .+|+ +
T Consensus 7 ~v~I~~~~~--~----~~~~~Y~I~v---~-~~~V~RRYsdF~~L~~~L~~------------~~~~---~~P~-~---- 56 (117)
T 1kmd_A 7 RIKVDDVKI--N----PKYVLYGVST---P-NKRLYKRYSEFWKLKTRLER------------DVGS---TIPY-D---- 56 (117)
T ss_dssp CCEEEEEEE--C----SSCEEEEEEC---S-SCCEEECHHHHHHHHHHHHH------------HHCS---CCCC-C----
T ss_pred EEEECCcee--c----CCEEEEEEEE---c-eEEEEechHHHHHHHHHHHH------------HcCc---cCCC-C----
Confidence 688888877 1 2478999999 2 89999999999999998884 1110 1220 1
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCc-----c--c-CCCCccHHHHHHHHHHHHHHHhhcc---ccChhhh
Q 001322 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPA-----L--G-RQHSMSDRAKVAMQQYLNHFLGNMD---IVNSREV 193 (1100)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~-----l--~-~~~~~~~r~r~~LE~YL~~lL~~~~---~~~~~~l 193 (1100)
||. +.. + + ..+.+.++||.+||.||+.++..+. ++++..+
T Consensus 57 ----------------------------lP~-K~~~~~~~~~~~~~~~~~ie~Rr~~Le~yL~~l~~~p~l~~~~~s~~l 107 (117)
T 1kmd_A 57 ----------------------------FPE-KPGVLDRRWQRRYDDPEMIDERRIGLERFLNELYNDRFDSRWRDTKIA 107 (117)
T ss_dssp ----------------------------CCC-CCCSSCSTTCCCTTCHHHHHHHHTTHHHHHHHHHCCSSCCHHHHSHHH
T ss_pred ----------------------------CCC-CCEecccccccCCCCHHHHHHHHHHHHHHHHHHHhCcchhhhhcCHHH
Confidence 111 111 1 1 2345667778899999999998774 4789999
Q ss_pred hhhhhccc
Q 001322 194 CKFLEASK 201 (1100)
Q Consensus 194 ~~FLevS~ 201 (1100)
.+||+.+.
T Consensus 108 ~~FL~~~~ 115 (117)
T 1kmd_A 108 QDFLQLSK 115 (117)
T ss_dssp HHHTTCCC
T ss_pred HHhcCCCC
Confidence 99999764
No 31
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.46 E-value=5.8e-07 Score=83.26 Aligned_cols=101 Identities=22% Similarity=0.419 Sum_probs=74.3
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCcc
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
-.+||||.|+.... .. ....|++|||||+++.|.|.+++.+..+..+|.++.. .+
T Consensus 3 v~~~G~L~K~~~~~-------------~~---~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---------~v 57 (108)
T 1u5d_A 3 VIKQGYLEKKSKDH-------------SF---FGSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGY---------SV 57 (108)
T ss_dssp EEEEEEEEEEEECS-------------SS---SCEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC---------EE
T ss_pred ccEEEEEEEcCCCC-------------Cc---cccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecce---------EE
Confidence 45899999984210 01 1147999999999999999998888888988877531 22
Q ss_pred ccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 291 SLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.............+.|.|.... |.+.|.|.|...+.+|+.+|..+.
T Consensus 58 ~~~~~~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~i 104 (108)
T 1u5d_A 58 RMAPHLRRDSKKESCFELTSQDRRTYEFTATSPAEARDWVDQISFLL 104 (108)
T ss_dssp EECGGGCSSGGGGGEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EeCCccccccCCcceEEEEcCCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 2111111223356899999887 999999999999999999998764
No 32
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.45 E-value=1.1e-06 Score=82.77 Aligned_cols=94 Identities=20% Similarity=0.318 Sum_probs=72.2
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~ 291 (1100)
-+||||.|+.. . ...|++|||||+++.|.|.+++.+.++..+|.++... .+.
T Consensus 6 ~~~G~L~K~g~----------------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~--------~~~ 57 (113)
T 1pls_A 6 IREGYLVKKGS----------------V----FNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGST--------LTS 57 (113)
T ss_dssp SEEEEEEEESS----------------S----SSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCC--------EES
T ss_pred cEEEEEEEeCC----------------C----CCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCE--------EEE
Confidence 58999998721 0 1479999999999999999988888899988776421 111
Q ss_pred cchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 292 LATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.. .+.....+.|.|.... |.+.|.|.|...+.+|+.+|+.+.
T Consensus 58 ~~---~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~ 100 (113)
T 1pls_A 58 PC---QDFGKRMFVFKITTTKQQDHFFQAAFLEERDAWVRDINKAI 100 (113)
T ss_dssp SC---CSSCCSSSEEEEEETTTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ec---CCCCCCccEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 01 1123456899998875 999999999999999999998865
No 33
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=98.40 E-value=7.3e-07 Score=81.47 Aligned_cols=88 Identities=17% Similarity=0.265 Sum_probs=65.1
Q ss_pred ceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCC--ccEEEEEcCCCCCCCCCCCcc
Q 001322 213 KEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTK--PMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 213 keg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~--~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
|+|||.|+. +. ...|++|||||+++.|.|.+++.+.. +..++-+.. ..+
T Consensus 3 k~G~L~K~g----------------~~----~k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~---------~~~ 53 (94)
T 2rsg_A 3 RCGVLSKWT----------------NY----IHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSK---------AVI 53 (94)
T ss_dssp EEEEEEEES----------------SS----TTCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTT---------CEE
T ss_pred EEEEEEEeC----------------CC----CCCceEEEEEEECCEEEEEEecccccccceeeEecce---------eee
Confidence 899999872 01 14799999999999999997765432 444432221 111
Q ss_pred ccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhc
Q 001322 291 SLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDA 335 (1100)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~ 335 (1100)
. ......+.|.|..++|++.|.|.|...+.+|+.+|+++
T Consensus 54 ~------~~~~~~~~F~i~~~~r~~~l~A~s~~e~~~Wi~aLq~A 92 (94)
T 2rsg_A 54 T------PHDFDECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQH 92 (94)
T ss_dssp E------ECSSCSSEEEEEETTEEEEEECCSSCCTHHHHHHHHHH
T ss_pred e------cCcccceeEEEEeCCeEEEEECCCHHHHHHHHHHHHhh
Confidence 1 12334678999999999999999999999999999876
No 34
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.39 E-value=1.1e-06 Score=82.84 Aligned_cols=96 Identities=23% Similarity=0.385 Sum_probs=73.8
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.--+||||.|+.. ....|++|||||+++.|.|.+++.+.++..+|.++.. ..
T Consensus 7 ~~~~~G~L~K~~~--------------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~--------~~ 58 (115)
T 2dn6_A 7 GVLKQGYMMKKGH--------------------RRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDEN--------CC 58 (115)
T ss_dssp SCSEEEEEEEECT--------------------TSSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTT--------CE
T ss_pred CceEEEEEEecCC--------------------CCCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCc--------EE
Confidence 4469999998731 0157999999999999999998888888888766531 12
Q ss_pred cccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+.... +.....+.|.|....|.+.|.|.+...+.+|+.+|..+.
T Consensus 59 v~~~~---~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~ai~~~~ 102 (115)
T 2dn6_A 59 VESLP---DKDGKKCLFLVKCFDKTFEISASDKKKKQEWIQAIHSTI 102 (115)
T ss_dssp EEEEC---CCTTCCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEECC---CCCCCeeEEEEEeCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 22111 123446899999999999999999999999999998765
No 35
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=98.37 E-value=1.9e-06 Score=85.58 Aligned_cols=105 Identities=13% Similarity=0.224 Sum_probs=76.3
Q ss_pred CCCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCC
Q 001322 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (1100)
Q Consensus 208 ~g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~ 287 (1100)
++.--++|||.|+... . + .....|++|||||+++.|.|.+++.+..+..+|.++..
T Consensus 14 ~~~~~~~G~L~K~g~~-~------------~---~~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~-------- 69 (148)
T 1u5f_A 14 LPFVIKAGYLEKRRKD-H------------S---FLGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGY-------- 69 (148)
T ss_dssp CSSEEEEEEEEEECCC-S------------S---CSSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC--------
T ss_pred CCCccEEEEEEEeCCC-C------------C---CcCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCc--------
Confidence 3455699999998310 0 0 01157999999999999999998888888888877531
Q ss_pred CccccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhccC
Q 001322 288 GRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
.+.............+.|.|.+.. |.+.|.|.|...+.+|+.+|..+..
T Consensus 70 -~v~~~~~~~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 119 (148)
T 1u5f_A 70 -DVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQ 119 (148)
T ss_dssp -EEEECTTSCSSTTGGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred -EEEECCCcccCCCCccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 121111001122345899999876 9999999999999999999999863
No 36
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.37 E-value=2.5e-06 Score=80.54 Aligned_cols=98 Identities=21% Similarity=0.381 Sum_probs=72.9
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.--+||||.|+... . ...|++|||||+++.|.|.+++.+..+..+|-++.. .
T Consensus 10 ~~~~~G~L~K~~~~---------------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---------~ 61 (117)
T 2d9y_A 10 PVTKAGWLFKQASS---------------G----VKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSF---------R 61 (117)
T ss_dssp CCCEEEEEEEECTT---------------S----SSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSC---------E
T ss_pred CeeEEEEEEEeCCC---------------C----CCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCe---------E
Confidence 34599999987310 0 157999999999999999998888888888876531 1
Q ss_pred cccchhhcccCCcceeEEEEe-CceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+..... .+.....+.|.|.. ..|.+.|.|.|...+.+|+.+|..+.
T Consensus 62 v~~~~~-~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 108 (117)
T 2d9y_A 62 VAAVQP-SDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 108 (117)
T ss_dssp EEECCT-TTTCCCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTT
T ss_pred EEEcCc-cccCCCccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 111000 11234568999964 56999999999999999999999976
No 37
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=98.36 E-value=1.7e-06 Score=82.49 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=72.7
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~ 291 (1100)
-+||||.|+... . ...|++|||||+++.|.|.+++.+.++..+|.+.. ..+.
T Consensus 12 ~~~G~L~K~~~~---------------~----~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~---------~~v~ 63 (123)
T 1upq_A 12 HIRGWLHKQDSS---------------G----LRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPS---------YNIR 63 (123)
T ss_dssp EEEEEEEEECSS---------------S----SCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGG---------CEEE
T ss_pred eEEEEEEeeCCC---------------C----CCCceeEEEEEeCCEEEEECCCCCcccceEEECCC---------CEEE
Confidence 589999987310 0 14699999999999999999888888888876543 1222
Q ss_pred cchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhccC
Q 001322 292 LATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
..... ......+.|.|...+ |.+.|.|.|...+.+|+.+|..+..
T Consensus 64 ~~~~~-~~~~~~~~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 109 (123)
T 1upq_A 64 PDGPG-APRGRRFTFTAEHPGMRTYVLAADTLEDLRGWLRALGRASR 109 (123)
T ss_dssp ECCSS-CTTSSSSEEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC
T ss_pred ECCCC-ccCCCcEEEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHh
Confidence 11110 122357899998766 9999999999999999999999864
No 38
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.36 E-value=2e-06 Score=81.90 Aligned_cols=98 Identities=21% Similarity=0.384 Sum_probs=72.9
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.--+||||.|+... ....|++|||||+++.|.|.+++.+..+..+|-++.. .
T Consensus 21 ~~~~~G~L~K~~~~-------------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---------~ 72 (122)
T 2yry_A 21 PVTKAGWLFKQASS-------------------GVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSF---------R 72 (122)
T ss_dssp CEEEEEEEEEECCS-------------------SSCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTC---------C
T ss_pred CccEEEEEEEECCC-------------------CCCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCC---------E
Confidence 34599999987310 0157999999999999999998888889988877631 1
Q ss_pred cccchhhcccCCcceeEEEEe-CceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+.... ..+.....+.|.|.. ..|.+.|.|.+...+.+|+.+|..+.
T Consensus 73 v~~~~-~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 119 (122)
T 2yry_A 73 VAAVQ-PSDNISRKHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAA 119 (122)
T ss_dssp CEECC-TTCSCSSSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEcC-ccccCCcccEEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 11100 011234568999964 57999999999999999999999865
No 39
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.34 E-value=1.6e-06 Score=82.04 Aligned_cols=92 Identities=16% Similarity=0.260 Sum_probs=71.2
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.--+||||.|+... ....|++|||||+++.|.|.+++.+.++..+|-++.. ..
T Consensus 7 ~~~~~G~L~K~~~~-------------------~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~--------~~ 59 (115)
T 2cod_A 7 GKVKSGWLDKLSPQ-------------------GKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAI--------ST 59 (115)
T ss_dssp CCCEEEEEEECCSS-------------------SSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTE--------EE
T ss_pred CccEEEEEEEcCCC-------------------CCCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcc--------eE
Confidence 34699999987310 0146999999999999999998887788877766431 11
Q ss_pred cccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+. .. + .+.|.|....|.+.|.|.+...+.+|+.+|..+.
T Consensus 60 v~------~~-~-~~~F~i~~~~r~~~l~a~s~~e~~~Wi~~l~~~~ 98 (115)
T 2cod_A 60 VR------VQ-G-DNKFEVVTTQRTFVFRVEKEEERNDWISILLNAL 98 (115)
T ss_dssp EE------EE-T-TTEEEEEESSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EE------eC-C-CCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 21 11 1 5789999999999999999999999999999865
No 40
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.34 E-value=3.2e-06 Score=79.71 Aligned_cols=106 Identities=16% Similarity=0.197 Sum_probs=75.4
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEc--CCeEEEeeCCCCCCccEEEEEcCCCCCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK--PGFLALLADPFDTKPMDIIVFDVLPASDGNG 286 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk--~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~ 286 (1100)
+.--+||||.|+.. . ...|++|||||+ +..|.|.+++.+.++..+|.++.........
T Consensus 6 ~~~~~~G~L~K~g~---------------~-----~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~ 65 (117)
T 1v5u_A 6 SGRSYEGILYKKGA---------------F-----MKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGT 65 (117)
T ss_dssp CSSSEEEEEEECCC---------------S-----SSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCC
T ss_pred CCccEEEEEEecCC---------------C-----CCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecC
Confidence 44569999998731 0 157999999999 8899999988888888887665421110000
Q ss_pred CCccccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhccCCC
Q 001322 287 EGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLRP 339 (1100)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~~~~ 339 (1100)
. ..+. .......+.|.|....|.+.|.|.|...+.+|+.+|..+....
T Consensus 66 ~---~~~~--~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 113 (117)
T 1v5u_A 66 P---TIGA--PKTVDEKAFFDVKTTRRVYNFCAQDVPSAQQWVDRIQSCLSSG 113 (117)
T ss_dssp C---CTTS--CSSSCTTTCEEEEESSCEEEEECSSHHHHHHHHHHHHTTCCCC
T ss_pred c---cccc--cccCCCCeEEEEECCCceEEEECCCHHHHHHHHHHHHHHhccC
Confidence 0 0000 0112345899999999999999999999999999999977443
No 41
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.33 E-value=2.3e-06 Score=83.62 Aligned_cols=98 Identities=15% Similarity=0.284 Sum_probs=71.4
Q ss_pred ceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEc---CCeEEEeeC----CCCCCccEEEEEcCCCCCCCC
Q 001322 213 KEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK---PGFLALLAD----PFDTKPMDIIVFDVLPASDGN 285 (1100)
Q Consensus 213 keg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk---~s~l~~~~~----~~~~~~~~v~lfD~~~~~~~~ 285 (1100)
++|||.|+... . ...|++|||||+ +..|.|+++ +.+.++..+|.....
T Consensus 17 ~~G~L~K~g~~--------------~-----~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~------ 71 (126)
T 1v5p_A 17 ICGFLDIEDNE--------------N-----SGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYI------ 71 (126)
T ss_dssp EECCEEEECTT--------------C-----SSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTC------
T ss_pred eEEEEEEeCCC--------------C-----CCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCc------
Confidence 69999987310 0 147999999999 667788888 456788888866531
Q ss_pred CCCccccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhccCC
Q 001322 286 GEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLR 338 (1100)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~~~ 338 (1100)
..|..+.. +.....++.|.|.++.|+..|.|.|...+.+|+.+|..+...
T Consensus 72 --~~V~~~~~-~~~~~~~~~F~i~t~~r~y~l~A~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 72 --SKVSIATP-KQKPKTPFCFVINALSQRYFLQANDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp --CEEEECCT-TTSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHTTTT
T ss_pred --cEEecCCc-ccCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 12322210 112234689999999999999999999999999999998644
No 42
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.33 E-value=1.8e-06 Score=82.01 Aligned_cols=90 Identities=14% Similarity=0.332 Sum_probs=67.5
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~ 291 (1100)
-+||||.|+.. + ....|++|||||+++.|.|.++..+..+..++|.+. .+.
T Consensus 11 ~~~G~L~K~~~----~---------------~~k~WkkR~fvL~~~~L~yyk~~~~~~~~~i~l~~~----------~v~ 61 (114)
T 2da0_A 11 EKKGYLLKKSD----G---------------IRKVWQRRKCSVKNGILTISHATSNRQPAKLNLLTC----------QVK 61 (114)
T ss_dssp CEEEEEEEECS----S---------------SCCCEEEEEEEEETTEEEECCSSCCSCCEEEETTTS----------EEE
T ss_pred cEEEEEEEeCC----C---------------CCCCceeEEEEEeCCEEEEEcCCCCCCCCEEEeeee----------EEE
Confidence 58999999831 0 014799999999999999999866555555444331 122
Q ss_pred cchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 292 LATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
. ....++.|.|....|.+.|.|.|...+.+|+.+|..+.
T Consensus 62 ~------~~~~~~~F~I~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 100 (114)
T 2da0_A 62 P------NAEDKKSFDLISHNRTYHFQAEDEQDYVAWISVLTNSK 100 (114)
T ss_dssp E------CSSSSSCEEEEETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred E------CCCCCCEEEEEcCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 1 12245799999999999999999999999999998764
No 43
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.32 E-value=2.1e-06 Score=82.41 Aligned_cols=98 Identities=22% Similarity=0.340 Sum_probs=72.8
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.--+||||.|+... ....|++|||||+++.|.|.+++.+..+..+|.++. ..
T Consensus 20 ~~~~~G~L~K~~~~-------------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~---------~~ 71 (128)
T 2dkp_A 20 PVVRRGWLYKQDST-------------------GMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPS---------FQ 71 (128)
T ss_dssp CCCEEEEEEEECCS-------------------SSCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGG---------SE
T ss_pred CcEEEEEEEEeCCC-------------------CCCCceeEEEEEeCCEEEEECCCCCcccceEEEcCc---------eE
Confidence 44699999887310 014799999999999999999888888887775542 12
Q ss_pred cccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+..... .+.....+.|.|.... |.+.|.|.+...+.+|+.+|..+.
T Consensus 72 v~~~~~-~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 118 (128)
T 2dkp_A 72 IALLTS-EDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAA 118 (128)
T ss_dssp EEECCG-GGCCSSCSEEEEECSSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEcCC-cccCCCCeEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 221111 1122456899998874 999999999999999999998875
No 44
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.32 E-value=3.6e-06 Score=80.55 Aligned_cols=96 Identities=16% Similarity=0.194 Sum_probs=73.1
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCC--eEEEeeCCCCCCccEEEEEcCCCCCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG--FLALLADPFDTKPMDIIVFDVLPASDGNG 286 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s--~l~~~~~~~~~~~~~v~lfD~~~~~~~~~ 286 (1100)
.+.-+||||.|+... +. ...|++|||||+++ .|.|.+++.+.++..+|-+...
T Consensus 6 ~~~~~~G~L~K~g~~--------------~~----~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~------- 60 (119)
T 2dhk_A 6 SGKKLCGYLSKFGGK--------------GP----IRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSA------- 60 (119)
T ss_dssp SCCCCEEEEEECSCS--------------SS----SCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGC-------
T ss_pred CCCcEEEEEEecCCC--------------CC----CCCceeEEEEEECCccEEEEECCCCCcccccEEECCCC-------
Confidence 345699999987310 00 15799999999999 9999998888888888866531
Q ss_pred CCccccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 287 EGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+.. . .....+.|.|....|.+.|.|.+...+.+|+.+|+.+.
T Consensus 61 --~~~~-~----~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 103 (119)
T 2dhk_A 61 --VFDC-K----ADAEEGIFEIKTPSRVITLKAATKQAMLYWLQQLQMKR 103 (119)
T ss_dssp --EEEE-C----TTGGGCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred --EEEe-c----CCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 1110 0 11235789999999999999999999999999998764
No 45
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.31 E-value=2.1e-06 Score=80.88 Aligned_cols=99 Identities=21% Similarity=0.332 Sum_probs=74.1
Q ss_pred CCCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCC
Q 001322 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGE 287 (1100)
Q Consensus 208 ~g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~ 287 (1100)
.+.--+||||.|+.. . ...|++|||||+++.|.|.+++.+..+..+|.++..
T Consensus 5 ~~~~~~~G~L~K~g~----------------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~-------- 56 (118)
T 1v89_A 5 SSGPIKMGWLKKQRS----------------I----VKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGC-------- 56 (118)
T ss_dssp SSCEEEEEEEEEECS----------------S----SSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTE--------
T ss_pred CCCCcEEEEEEecCC----------------C----CCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCC--------
Confidence 345569999998721 0 146999999999999999998888888888765421
Q ss_pred Cccc-cchhhcccCCcceeEEEEe--------CceEEEEEeCchhhHHHHHHHHHhccC
Q 001322 288 GRVS-LATEVKERNPLRHAFKVTC--------GVRSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 288 ~~~~-~~~~~~~~~~~~~~~~i~~--------~~r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
.+. +.. .......+.|.|.. ..|.+.|.|.|...+.+|+.+|..+..
T Consensus 57 -~v~~~~~--~~~~~~~~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 57 -TIKEIAT--NPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp -EEEEECC--CSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred -EEEEcCc--CcccCCcceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 111 110 01223468999987 789999999999999999999998763
No 46
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.31 E-value=1.9e-06 Score=84.16 Aligned_cols=97 Identities=16% Similarity=0.141 Sum_probs=74.3
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEee----CCCCCCccEEEEEcCCCCCCCCCC
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLA----DPFDTKPMDIIVFDVLPASDGNGE 287 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~----~~~~~~~~~v~lfD~~~~~~~~~~ 287 (1100)
-++|||.|+.+. . ...|++|||||++..|.|.+ +..+..++.+|..+.
T Consensus 9 ~~~G~L~KqG~~--------------~-----~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g--------- 60 (126)
T 1wi1_A 9 KHSGYLWAIGKN--------------V-----WKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDG--------- 60 (126)
T ss_dssp EEEEEEEEECSS--------------S-----CCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSS---------
T ss_pred ceeEEEEEeCCC--------------c-----ccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCC---------
Confidence 389999987210 0 14799999999999999998 777889999998874
Q ss_pred CccccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 288 GRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..|.......+....++.|.|...+++..|.|.|...+..|+.+|..+.
T Consensus 61 ~tV~~~~~~~~~~~~k~~F~~v~~~~ty~~~Adseee~~~WikAi~~A~ 109 (126)
T 1wi1_A 61 YTVDYTDPQPGLEGGRAFFNAVKEGDTVIFASDDEQDRILWVQAMYRAT 109 (126)
T ss_dssp CEEEECCCCSSCCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCcccccCceEEEEecCCceEEEEcCCHHHHHHHHHHHHHHh
Confidence 2332211111123457899988888899999999999999999999976
No 47
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.31 E-value=6.1e-06 Score=77.28 Aligned_cols=98 Identities=14% Similarity=0.293 Sum_probs=72.7
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~ 288 (1100)
+.-.+||||.|+.. . ...|++|||||+++.|.|.+++.+.++..+|.+...
T Consensus 6 ~~~~~~G~L~K~~~---------------~-----~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~--------- 56 (109)
T 1wgq_A 6 SGSTMSGYLYRSKG---------------S-----KKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGF--------- 56 (109)
T ss_dssp CSCSCEEEEEEESS---------------T-----TSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSE---------
T ss_pred CCCeEEEEEEeCCC---------------C-----CCCceeEEEEEeCCEEEEECCCCcCccCceEECCCC---------
Confidence 34568999998721 0 157999999999999999999888888888766531
Q ss_pred ccccchhhcccCCcceeEEEEeC-ceEEEEEeCchhhHHHHHHHHHhccCC
Q 001322 289 RVSLATEVKERNPLRHAFKVTCG-VRSIRLRTRTGAKVRDWVAAINDAGLR 338 (1100)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~~~~~~~~w~~~i~~~~~~ 338 (1100)
.+.... +.....+.|.|... .|.+.|.|.|...+.+|+.+|..+...
T Consensus 57 ~~~~~~---~~~~~~~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a~~~ 104 (109)
T 1wgq_A 57 TVTLVK---DENSESKVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEGTVS 104 (109)
T ss_dssp EEEECC---CSSCSSSEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHHSC
T ss_pred EEEECC---CCCCCCcEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHHhcc
Confidence 111110 11223589999866 467999999999999999999998643
No 48
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=98.30 E-value=2.2e-06 Score=81.91 Aligned_cols=99 Identities=13% Similarity=0.356 Sum_probs=74.7
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~ 288 (1100)
+.-.+||||.|+.. . ...|++|||||+++.|.|.++..+.++..+|-++...
T Consensus 12 ~~~~~~G~L~K~g~----------------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~-------- 63 (125)
T 1eaz_A 12 SAVIKAGYCVKQGA----------------V----MKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVH-------- 63 (125)
T ss_dssp CCCSEEEEEEEECT----------------T----TCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCC--------
T ss_pred CCccEEEEEEEeCC----------------C----CCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccce--------
Confidence 44579999998721 0 1469999999999999999988888888888776421
Q ss_pred ccccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 289 RVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+..... .+.....+.|.|....|.+.|.|.+...+.+|+.+|..+.
T Consensus 64 ~v~~~~~-~~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~W~~al~~~i 110 (125)
T 1eaz_A 64 KVQECKQ-SDIMMRDNLFEIVTTSRTFYVQADSPEEMHSWIKAVSGAI 110 (125)
T ss_dssp EEEECTT-HHHHTCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeeccc-cccCCcCCEEEEEeCCcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 1111100 0112346899999999999999999999999999999875
No 49
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.30 E-value=3.6e-06 Score=80.77 Aligned_cols=95 Identities=19% Similarity=0.341 Sum_probs=74.2
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.--+||||.|+.. . ...|++|||||+++.|.|.+++.+..+..+|-++.- ..
T Consensus 17 ~~~~~G~L~K~g~----------------~----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~--------~~ 68 (126)
T 1fao_A 17 LGTKEGYLTKQGG----------------L----VKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTEC--------SA 68 (126)
T ss_dssp TTCEEEEEEEECS----------------S----SCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGC--------CE
T ss_pred CccEEEEEEEcCC----------------C----CCCcccEEEEEECCEEEEeCCCCCCCceeEEEccce--------EE
Confidence 3469999998721 0 146999999999999999998888888888877641 11
Q ss_pred cccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+... +.....+.|.|.+..|.+.|.|.|...+.+|+.+|..+.
T Consensus 69 v~~~----~~~~~~~~F~i~~~~r~~~l~a~s~~e~~~Wi~al~~~i 111 (126)
T 1fao_A 69 VQFD----YSQERVNCFCLVFPFRTFYLCAKTGVEADEWIKILRWKL 111 (126)
T ss_dssp EEEE----CSSSSSSEEEEEETTEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEec----ccCCCCCEEEEEeCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 2111 123456899999999999999999999999999999865
No 50
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=98.27 E-value=4.4e-06 Score=79.84 Aligned_cols=92 Identities=15% Similarity=0.294 Sum_probs=68.1
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~ 291 (1100)
-+||||.|+.. . ...|++|||||+++.|.|.+++.+.++..+|-++.- .+.
T Consensus 6 ~~~G~L~K~g~---------------~-----~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~---------~v~ 56 (127)
T 1fgy_A 6 DREGWLLKLGG---------------R-----VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENL---------SIR 56 (127)
T ss_dssp SEEEEEEEECS---------------S-----SCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC---------EEE
T ss_pred ceEeEEEEECC---------------C-----CCCeEEEEEEEECCEEEEeCCCCCCCcceEEECCce---------EEE
Confidence 58999998721 0 146999999999999999998888889888876631 111
Q ss_pred cchhhcccCCcceeEEEEe----------------------CceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 292 LATEVKERNPLRHAFKVTC----------------------GVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~----------------------~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.. +.....+.|.|.+ ..|.+.|.|.|...+.+|+.+|..+.
T Consensus 57 ~~----~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i 119 (127)
T 1fgy_A 57 EV----LDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 119 (127)
T ss_dssp EE----CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHH
T ss_pred Ec----cCCCCCceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 10 0122345666654 34889999999999999999999875
No 51
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.25 E-value=5.1e-06 Score=81.58 Aligned_cols=95 Identities=18% Similarity=0.341 Sum_probs=70.9
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.--+||||.|+. . ...|++||||||+..|.|++++.+..+..+|.++.. .
T Consensus 7 ~v~k~GwL~K~g--~-------------------~k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~---------~ 56 (130)
T 1v88_A 7 GIVMADWLKIRG--T-------------------LKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNAC---------E 56 (130)
T ss_dssp SCCEEEEEEECC--S-------------------SSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSC---------E
T ss_pred ceEEEeEEEEeC--C-------------------CCCceEEEEEEECCEEEEECCCCCCCceEEEEcCCC---------E
Confidence 345999998851 0 146999999999999999999988899999987642 2
Q ss_pred cccchhhcccCCcceeEEEEeCc------------------------eEEEEEeCchhhHHHHHHHHHhccCC
Q 001322 290 VSLATEVKERNPLRHAFKVTCGV------------------------RSIRLRTRTGAKVRDWVAAINDAGLR 338 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~------------------------r~l~l~~~~~~~~~~w~~~i~~~~~~ 338 (1100)
+. .. ......+.|.|.+.. |.+.|.|.|..++.+|+.+|+.+...
T Consensus 57 v~-~~---~~~~~~~~F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~ 125 (130)
T 1v88_A 57 II-ER---PSKKDGFCFKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKS 125 (130)
T ss_dssp EC-CC---CTTTSSCEEEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTT
T ss_pred EE-EC---CCCCCCeEEEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 21 00 111234788887542 34889999999999999999998643
No 52
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.25 E-value=5.3e-06 Score=80.82 Aligned_cols=102 Identities=16% Similarity=0.259 Sum_probs=71.9
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEE-cCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCC
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVL-KPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vv-k~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~ 288 (1100)
.-.+||||.|+.. . ...|++||||| ++..|.|.+++.+..+...++.+..- .
T Consensus 7 ~v~~~G~L~K~g~----------------~----~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~-------~ 59 (130)
T 2d9v_A 7 GLVRGGWLWRQSS----------------I----LRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNV-------R 59 (130)
T ss_dssp CEEEEEEEEEECS----------------S----SCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTE-------E
T ss_pred ceeEEEEEEeecC----------------c----cCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccce-------e
Confidence 3469999998721 0 14799999999 99999999988777777666554210 0
Q ss_pred ccccch---hh--cccCCcceeEEEEe-CceEEEEEeCchhhHHHHHHHHHhccCC
Q 001322 289 RVSLAT---EV--KERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAGLR 338 (1100)
Q Consensus 289 ~~~~~~---~~--~~~~~~~~~~~i~~-~~r~l~l~~~~~~~~~~w~~~i~~~~~~ 338 (1100)
.+.++. .+ .+....++.|.|.. ..|++.|.|.|...+.+|+.+|..+...
T Consensus 60 ~i~~~~~~~~v~~~~~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a~~~ 115 (130)
T 2d9v_A 60 DIKVGQECQDVQPPEGRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEANST 115 (130)
T ss_dssp EEEEGGGCSSCCCCSSCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHHTC
T ss_pred EEeccccccccCCCCCCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHHcC
Confidence 011110 00 01223468999988 5599999999999999999999998744
No 53
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.24 E-value=2.9e-06 Score=85.41 Aligned_cols=97 Identities=14% Similarity=0.186 Sum_probs=71.4
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~ 288 (1100)
.+-.|||||.|+.. . . ..|++||||+++..|.|.+++.+..+...|-+... .
T Consensus 16 ~pv~keG~L~Kkg~---------------~----~-k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~--------~ 67 (149)
T 1x1f_A 16 LPLYFEGFLLIKRS---------------G----Y-REYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDL--------T 67 (149)
T ss_dssp SCEEEEEEEEEECT---------------T----C-CSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSC--------C
T ss_pred CCccEEEEEEEeCC---------------C----C-CCceeEEEEEcCCEEEEEeCCCccccCcEEECCCc--------e
Confidence 34679999998720 0 1 57999999999999999998887777765544321 1
Q ss_pred ccccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 289 RVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+.... ......+.|.|.+..|++.|.|.|...+.+|+.+|....
T Consensus 68 ~~~~~~---~~~~~~~~F~I~t~~r~~~f~A~s~ee~~eWi~aI~~v~ 112 (149)
T 1x1f_A 68 CLTEQN---STEKNCAKFTLVLPKEEVQLKTENTESGEEWRGFILTVT 112 (149)
T ss_dssp EEEECC---CTTSCCCEEEEECSSCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEeecc---CCCCcCcEEEEEcCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 110000 011135789999999999999999999999999998865
No 54
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.22 E-value=7.2e-06 Score=76.82 Aligned_cols=93 Identities=11% Similarity=0.241 Sum_probs=67.9
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.--+||||.|+. ...|++|||||+++.|.|.+++.+ .....+.++.. ...
T Consensus 7 ~~~~~G~L~K~~----------------------~k~Wk~RwfvL~~~~L~yyk~~~~-~~~~~~~i~l~-------~~~ 56 (107)
T 2cof_A 7 GLETSSYLNVLV----------------------NSQWKSRWCSVRDNHLHFYQDRNR-SKVAQQPLSLV-------GCE 56 (107)
T ss_dssp CCTTCCEEEEEE----------------------TTEEEEEEEEECSSCEEEECSSTT-CSEEEEEECTT-------TCE
T ss_pred CCcEeEEEEEec----------------------CCCcceEEEEEECCEEEEEeCCcc-cCCCeeEEecc-------ceE
Confidence 345899998861 146999999999999999987654 44445555431 112
Q ss_pred cccchhhcccCCcceeEEEEeC-ceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTCG-VRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+.... .....+.|.|... .|.+.|.|.|...+.+|+.+|..+.
T Consensus 57 v~~~~----~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~ 100 (107)
T 2cof_A 57 VVPDP----SPDHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSES 100 (107)
T ss_dssp EECCC----BTTBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHS
T ss_pred EEECC----CCCCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHH
Confidence 32211 1234689999887 8889999999999999999999875
No 55
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=98.20 E-value=6.1e-06 Score=83.97 Aligned_cols=106 Identities=11% Similarity=0.122 Sum_probs=71.6
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCC-CccEEEEEcCCCCCCCCCCC
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDT-KPMDIIVFDVLPASDGNGEG 288 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~-~~~~v~lfD~~~~~~~~~~~ 288 (1100)
.--+||||.||+..+. -+ -...|++|||||+++.|.|.+++.+. .+..+|-++....
T Consensus 14 ~~i~EG~L~Kr~~~kk-------------~~--~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~------- 71 (164)
T 2lul_A 14 NTILEEILIKRSQQKK-------------KT--SPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKC------- 71 (164)
T ss_dssp SEEEEEEEEEECCCCS-------------SS--CCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCE-------
T ss_pred CeeEEEEEEEecCCCC-------------CC--CCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEE-------
Confidence 3569999999853111 01 11469999999999999999876443 3555554432110
Q ss_pred ccccchh--hcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhccCC
Q 001322 289 RVSLATE--VKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGLR 338 (1100)
Q Consensus 289 ~~~~~~~--~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~~~ 338 (1100)
+..... ........+.|.|....|++.|.+.|..++.+|+.+|+++...
T Consensus 72 -v~~~~~~~~~~~~~~~~~f~i~t~~rt~~l~A~s~~e~~~Wi~aL~~~i~~ 122 (164)
T 2lul_A 72 -VEIVKNDDGVIPCQNKYPFQVVHDANTLYIFAPSPQSRDLWVKKLKEEIKN 122 (164)
T ss_dssp -EEECCCCSSSCCSSSCSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHHTT
T ss_pred -EEeccccccCcccccceeEEEecCCcEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 100000 0011234688999999999999999999999999999997643
No 56
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=98.19 E-value=7.5e-06 Score=79.47 Aligned_cols=96 Identities=18% Similarity=0.294 Sum_probs=72.7
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~ 291 (1100)
-++|+|.|+.++ .....|++|||||++.+|.|++|..+..++.+|..|...-- .
T Consensus 13 irkGWL~k~~~g------------------~~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~vr--------~ 66 (125)
T 1dyn_A 13 IRKGWLTINNIG------------------IMKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLR--------D 66 (125)
T ss_dssp EEEEEEEESCCC------------------GGGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTEEEE--------E
T ss_pred EEEEEEEEecCc------------------cccCCceeeEEEEeccceeeecCCcccccceEEECCCceEe--------c
Confidence 699999885311 12246999999999999999999999999999988753100 0
Q ss_pred cchhhcccCCcceeEEEEeCc--------eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 292 LATEVKERNPLRHAFKVTCGV--------RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~~~--------r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+... .-..+|.|.|.+.. +.+.|.|.|...+.+|.++|..++
T Consensus 67 v~~~---~~~rk~~F~l~~~d~r~v~~~h~~y~LsA~t~ee~~~Wi~s~~ra~ 116 (125)
T 1dyn_A 67 VEKG---FMSSKHIFALFNTEQRNVYKDYRQLELACETQEEVDSWKASFLRAG 116 (125)
T ss_dssp CCSC---SSSSCEEEEEEETTSSCSSTTCSSEEEEESSHHHHHHHHHHHHHTT
T ss_pred cCCC---CCCCceEEEEECCCCccccccceEEEEeCCCHHHHHHHHHHHHhCc
Confidence 1110 01346899999865 489999999999999999998876
No 57
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.18 E-value=6e-06 Score=77.57 Aligned_cols=103 Identities=14% Similarity=0.257 Sum_probs=69.0
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEE-cCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCcc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVL-KPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vv-k~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
-+||||.|+.. . ...|++||||| +++.|.|.+++.+.++...|-+.... ++......+
T Consensus 6 ~~~G~L~K~g~----------------~----~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~-i~l~~~~~v 64 (112)
T 3aj4_A 6 VKSGWLLRQST----------------I----LKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDC-INIRTGQEC 64 (112)
T ss_dssp SEEEEEEEECS----------------S----SCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHE-EEEEEGGGC
T ss_pred eEEEEEEeeCC----------------C----CCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccc-eeecccccc
Confidence 48999998721 0 14799999999 99999999988877777766543210 000000011
Q ss_pred ccchhhcccCCcceeEEEEe-CceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 291 SLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.... ..+.....+.|.|.. .+|.+.|.|.|...+.+|+.+|+.+.
T Consensus 65 ~~v~-~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~ 110 (112)
T 3aj4_A 65 RDTQ-PPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQDSR 110 (112)
T ss_dssp CSCC-CSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cccC-CCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHHHh
Confidence 1000 001112257999985 48999999999999999999999864
No 58
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.11 E-value=6.5e-06 Score=84.30 Aligned_cols=111 Identities=12% Similarity=0.095 Sum_probs=69.5
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeC----CCCCCccEEEEEcCCCCCC-C--
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLAD----PFDTKPMDIIVFDVLPASD-G-- 284 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~----~~~~~~~~v~lfD~~~~~~-~-- 284 (1100)
-|||||.|+...+. . +....|++|||||++..|.|.++ ..+.++..+|-++...... .
T Consensus 4 ikeG~L~Kr~~~~~-------------~--~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~ 68 (169)
T 1btk_A 4 ILESIFLKRSQQKK-------------K--TSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVP 68 (169)
T ss_dssp CEEEEEEEECCCSS-------------T--TCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCC
T ss_pred EEEEEEEEecCCCC-------------C--cccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccC
Confidence 48999999842110 0 01146999999999999999997 3455666666544311000 0
Q ss_pred CCCCcccc-----chhhcccCCc------ceeEEEEeCceEEEEEeCchhhHHHHHHHHHhccC
Q 001322 285 NGEGRVSL-----ATEVKERNPL------RHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 285 ~~~~~~~~-----~~~~~~~~~~------~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
..+..... +....+.++. .+.|.|....|++.|.+.|..++.+|+.+|..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~rt~yl~A~s~~E~~eWi~aI~~~i~ 132 (169)
T 1btk_A 69 EKNPPPERQIPRRGEESSEMEQISIIERFPYPFQVVYDEGPLYVFSPTEELRKRWIHQLKNVIR 132 (169)
T ss_dssp CSSCCGGGCC---------CCTTHHHHCCCEEEEEEETTCCEEEEESCHHHHHHHHHHHHHHHT
T ss_pred CCCcchhcccccccCcccccccccccccccccEEEEeCCceEEEEcCCHHHHHHHHHHHHHHHH
Confidence 00000000 0000000111 18899999999999999999999999999999764
No 59
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.11 E-value=1.2e-05 Score=74.71 Aligned_cols=98 Identities=16% Similarity=0.275 Sum_probs=69.9
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCC--eEEEeeCCCCCCccEEEEEcCCCCCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG--FLALLADPFDTKPMDIIVFDVLPASDGNG 286 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s--~l~~~~~~~~~~~~~v~lfD~~~~~~~~~ 286 (1100)
+.--+||||.|+.. . ...|++|||||+++ .|.|.+++.+..+..+|-++.-
T Consensus 5 ~~~~~~G~L~K~g~----------------~----~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~------- 57 (109)
T 2i5f_A 5 GVIIKQGCLLKQGH----------------R----RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGC------- 57 (109)
T ss_dssp CCEEEEEEEEEECT----------------T----TCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTC-------
T ss_pred CceeEEEEEEEcCC----------------C----CCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCC-------
Confidence 34469999998721 0 14699999999987 9999988888888888877631
Q ss_pred CCccc-cchhh-cccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhc
Q 001322 287 EGRVS-LATEV-KERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDA 335 (1100)
Q Consensus 287 ~~~~~-~~~~~-~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~ 335 (1100)
.+. +.... .......+.|.|.... +.+.|.|.|...+.+|+.+|..+
T Consensus 58 --~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~ 107 (109)
T 2i5f_A 58 --VVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMA 107 (109)
T ss_dssp --EEEEECC--------CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHH
T ss_pred --EEEEccCCcccccCCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 111 11000 0011246899999876 56999999999999999999875
No 60
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=98.10 E-value=2.3e-05 Score=72.40 Aligned_cols=78 Identities=17% Similarity=0.339 Sum_probs=58.3
Q ss_pred CCCceEEEEEcCCeEEEeeCCCCC--CccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeC-ceEEEEEeCc
Q 001322 245 DNWQKVWAVLKPGFLALLADPFDT--KPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG-VRSIRLRTRT 321 (1100)
Q Consensus 245 ~~w~krW~vvk~s~l~~~~~~~~~--~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~~ 321 (1100)
..|++|||||+++.|.|.+++.+. .+..+|-+.. ..+.. .....+.|.|... .|.+.|.|.|
T Consensus 13 k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~---------~~v~~------~~~~~~~F~i~~~~~r~~~l~a~s 77 (103)
T 3rcp_A 13 TGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAV---------CEIKV------HSADNTRMELIIPGEQHFYMKAVN 77 (103)
T ss_dssp TCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGG---------CEEEC------CTTCSSEEEEEETTTEEEEEECSS
T ss_pred CCeeceEEEEECCEEEEEecCCcccCCcccEEEeee---------eEEEE------cCCCCceEEEEeCCCCEEEEECCC
Confidence 579999999999999999887642 4666665431 12211 1123568888875 8999999999
Q ss_pred hhhHHHHHHHHHhccC
Q 001322 322 GAKVRDWVAAINDAGL 337 (1100)
Q Consensus 322 ~~~~~~w~~~i~~~~~ 337 (1100)
...+.+|+.+|..+..
T Consensus 78 ~~e~~~Wi~al~~a~~ 93 (103)
T 3rcp_A 78 AAERQRWLVALGSSKA 93 (103)
T ss_dssp HHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999763
No 61
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=98.08 E-value=1.3e-05 Score=85.84 Aligned_cols=79 Identities=14% Similarity=0.331 Sum_probs=64.5
Q ss_pred CCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCceEEEEEeCchhh
Q 001322 245 DNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAK 324 (1100)
Q Consensus 245 ~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~ 324 (1100)
..|++|||||+++.|.|.+++.+..+..+|.++.- .+ +. +.....++|.|.+.+|.+.|.|.|...
T Consensus 77 k~WkkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~---------~~-v~----~~~~k~~~F~I~t~~r~~~l~A~s~~e 142 (228)
T 3tfm_A 77 RNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSA---------KE-II----DNTNKENGIDIIMADRTFHLIAESPED 142 (228)
T ss_dssp GGCEEEEEEECSSEEEEESSTTCCSEEEEEEGGGC---------SE-EE----EETTTTSEEEEECSSCEEEEECSSHHH
T ss_pred CCceEEEEEEeCCEEEEEeCCCCcceeEEEEcCCC---------EE-ec----cCCCCCcEEEEEcCCcEEEEEcCCHHH
Confidence 57999999999999999998888888888877641 11 11 122346899999999999999999999
Q ss_pred HHHHHHHHHhccC
Q 001322 325 VRDWVAAINDAGL 337 (1100)
Q Consensus 325 ~~~w~~~i~~~~~ 337 (1100)
+.+|+.+|..+..
T Consensus 143 ~~~Wv~aL~~~i~ 155 (228)
T 3tfm_A 143 ASQWFSVLSQVHS 155 (228)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988764
No 62
>2wwe_A Phosphoinositide-3-kinase, class 2, gamma polypeptide; phosphoprotein, nucleotide-binding, PIK3C2G, membrane, PX-domain, transferase, ATP-binding; 1.25A {Homo sapiens}
Probab=98.07 E-value=1e-05 Score=78.64 Aligned_cols=97 Identities=23% Similarity=0.244 Sum_probs=69.2
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEee-eeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYK-QFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMA 123 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG-~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~ 123 (1100)
+|.|.+.... + ...|.|+++.- .=.|.|.|+|++|..||.+||+ . +|.
T Consensus 27 ~~~v~~~~k~-~------~~~Yvi~V~~sd~~~~~~~rry~eF~~LH~qLkk------------~-------Fp~----- 75 (127)
T 2wwe_A 27 RATILGFSKK-S------SNLYLIQVTHSNNETSLTEKSFEQFSKLHSQLQK------------Q-------FAS----- 75 (127)
T ss_dssp EEEEEEEETT-E------EEEEEEEEEETTSCEEEEEECHHHHHHHHHHHHH------------H-------TTT-----
T ss_pred EEEEEEEEec-c------cEEEEEEEEEeCCCeEEEEEEHHHHHHHHHHHHH------------h-------Ccc-----
Confidence 7888887443 2 46799999998 5699999999999999999985 1 321
Q ss_pred ccccCccccccccccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHh-hccccChhhhhhhhh
Q 001322 124 VVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLG-NMDIVNSREVCKFLE 198 (1100)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~-~~~~~~~~~l~~FLe 198 (1100)
+..|+ +|. +..++...+-.+ |++.||.||+.|+. ...+.++..+.+||+
T Consensus 76 ---------------------~~LP~---fP~-K~ll~~t~~~~e-Rr~~Le~Ylq~Ll~~~~~Ia~Sd~v~~Ff~ 125 (127)
T 2wwe_A 76 ---------------------LTLPE---FPH-WWHLPFTNSDHR-RFRDLNHYMEQILNVSHEVTNSDCVLSFFL 125 (127)
T ss_dssp ---------------------SCCCC---CCC-TTSHHHHHCHHH-HHHHHHHHHHHHTTSCHHHHTSHHHHHHHH
T ss_pred ---------------------ccCCC---CCC-ccccCcCHHHHH-HHHHHHHHHHHHhcCCceeecCHHHHHHhC
Confidence 01111 222 233343333333 56799999999998 477899999999996
No 63
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=98.06 E-value=6e-06 Score=94.60 Aligned_cols=105 Identities=11% Similarity=0.129 Sum_probs=71.9
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCCCcc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQN-LGMGDHMA 123 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~-lp~~~~~~ 123 (1100)
.|.|.+-++....+-...+++|+|..+.. .|+|.|+|+||..||.+|+. .+ .. +.+||
T Consensus 22 ~i~V~dp~k~~~~~g~~~y~~Y~I~~~~~--~~~V~RRYsdF~~L~~~L~~------------~~----p~~~~iP~--- 80 (366)
T 3dyt_A 22 DCVVADPRKGSKMYGLKSYIEYQLTPTNT--NRSVNHRYKHFDWLYERLLV------------KF----GSAIPIPS--- 80 (366)
T ss_dssp CEEEECGGGSSSCCCCCSSCEEEEEETTC--SCCEEEEHHHHHHHHHHHHH------------HH----TTTSCCCC---
T ss_pred EEEEcCceeecCCCCCcCeEEEEEEEecC--cEEEEeeHHHHHHHHHHHHH------------hC----CCcCcCCC---
Confidence 68888876654211112588999998753 79999999999999998873 11 11 22222
Q ss_pred ccccCccccccccccccccccCCCCCCCCCCCCCCcccC-CCCccHHHHHHHHHHHHHHHhhccccChhhhhhhhhcc
Q 001322 124 VVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR-QHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEAS 200 (1100)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~-~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~FLevS 200 (1100)
||. +..+++ .+.+.++||..||.||+.++..+.++++..+..||+.+
T Consensus 81 -----------------------------lP~-K~~~g~~~~~fie~Rr~~Le~fL~~i~~~p~l~~~~~~~~FL~~~ 128 (366)
T 3dyt_A 81 -----------------------------LPD-KQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFR 128 (366)
T ss_dssp -----------------------------CC------------CHHHHHHHHHHHHHHHHTCTTGGGSHHHHHHHHCS
T ss_pred -----------------------------CcC-CcccCCCCHHHHHHHHHHHHHHHHHHhCCHhhhCCcHHHHhhCCC
Confidence 221 222332 45677777889999999999999999999999999985
No 64
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.05 E-value=1.5e-05 Score=76.73 Aligned_cols=100 Identities=16% Similarity=0.260 Sum_probs=72.2
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCC--eEEEeeCCCCCCccEEEEEcCCCCCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG--FLALLADPFDTKPMDIIVFDVLPASDGNG 286 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s--~l~~~~~~~~~~~~~v~lfD~~~~~~~~~ 286 (1100)
+.--+||||.|+.. . ...|++|||||+++ +|.|.+++.+..+..+|-++.-
T Consensus 16 ~~~~~~G~L~K~g~----------------~----~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~------- 68 (129)
T 1x05_A 16 GVIIKQGCLLKQGH----------------R----RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGC------- 68 (129)
T ss_dssp SEEEEEEEEEECCS----------------S----CCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTC-------
T ss_pred CCceEEEEEEecCC----------------C----CCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCC-------
Confidence 34569999998721 0 14699999999986 9999988878888888876531
Q ss_pred CCccc-cchh-hcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhccC
Q 001322 287 EGRVS-LATE-VKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 287 ~~~~~-~~~~-~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
.+. +... ........+.|.|.... |.+.|.|.+...+.+|+.+|..+..
T Consensus 69 --~v~~~~~~~~~~~~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 120 (129)
T 1x05_A 69 --VVTSVESNSNGRKSEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASR 120 (129)
T ss_dssp --EEEECCCCCCSSSCSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHT
T ss_pred --EEEEccCCccccccCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 111 1000 00012256899999875 6699999999999999999999763
No 65
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=98.04 E-value=1.3e-05 Score=84.97 Aligned_cols=103 Identities=14% Similarity=0.252 Sum_probs=74.6
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEG 288 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~ 288 (1100)
+.--++|||.|+.... +. -...|++|||||+++.|.|++++.+.++..+|-++..
T Consensus 104 ~~v~k~G~L~Kkg~~~-------------~~---~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~--------- 158 (211)
T 1u5e_A 104 PFVIKAGYLEKRRKDH-------------SF---LGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGY--------- 158 (211)
T ss_dssp SSEEEEEEEEEEEHHH-------------HT---TTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTC---------
T ss_pred CCccEEEEEEEECCCC-------------Cc---CCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCc---------
Confidence 4456999999984200 00 1157999999999999999999888888888877531
Q ss_pred ccccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 289 RVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+.............+.|.|.... |.+.|.|.+...+.+|+.+|..+.
T Consensus 159 ~~v~~~~~~~~~~k~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai 207 (211)
T 1u5e_A 159 DVRMNNTLRKDGKKDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 207 (211)
T ss_dssp EEEECGGGCSSTTGGGEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEcCCccccCCCCCEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 111110000122345899999875 999999999999999999999865
No 66
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.03 E-value=2.1e-05 Score=75.41 Aligned_cols=82 Identities=21% Similarity=0.392 Sum_probs=63.3
Q ss_pred CCCceEEEEEcCC---eEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCceEEEEEeCc
Q 001322 245 DNWQKVWAVLKPG---FLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRT 321 (1100)
Q Consensus 245 ~~w~krW~vvk~s---~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~ 321 (1100)
..|+||||||+++ .|.|.+++.+.++...|.+.. ..|..... .+.....|.|+|...++...|.+.|
T Consensus 21 ~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g---------~~V~~~~~-~~~~~~~~~Fki~~~~~~y~f~A~s 90 (112)
T 2coc_A 21 ETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPS---------CKLSVPDP-EERLDSGHVWKLQWAKQSWYLSASS 90 (112)
T ss_dssp SCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGG---------CEEECCCS-SSCCSSSEEEEEEETTEEEEEEESS
T ss_pred CCceEEEEEEECCCccEEEEECCCCccCcceEEEcCC---------CEEEecCc-ccccCCCCEEEEecCCeEEEEEcCC
Confidence 4699999999985 666677888888888887653 23332111 1122357899999999999999999
Q ss_pred hhhHHHHHHHHHhcc
Q 001322 322 GAKVRDWVAAINDAG 336 (1100)
Q Consensus 322 ~~~~~~w~~~i~~~~ 336 (1100)
...+.+|+.+|..+.
T Consensus 91 ~e~~~~Wl~al~~A~ 105 (112)
T 2coc_A 91 AELQQQWLETLSTAA 105 (112)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999975
No 67
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.03 E-value=1.8e-05 Score=80.09 Aligned_cols=105 Identities=14% Similarity=0.237 Sum_probs=65.6
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCC--CCccEEEEEcCCCCCCCCCCCc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFD--TKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~--~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
-+||||.+++.....| .. . + . ....|++|||||++..|.|+++..+ ..+..+|-++.. ...
T Consensus 4 ~~eG~L~~k~~~~~~g-kK---~---g--~-~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~-------~~~ 66 (168)
T 2j59_M 4 AKEGWLHFRPLVTDKG-KR---V---G--G-SIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVN-------ACL 66 (168)
T ss_dssp CEEEEEEEEECC----------------------CCEEEEEEEETTEEEEESCTTCC--------CEECS-------SCE
T ss_pred cEEEEEeeeeecccCC-cc---c---C--C-CCCCceEEEEEEeCCEEEEEECCcccccccCCceEeccc-------ceE
Confidence 4899999775211111 00 0 0 0 1257999999999999999998744 445555544431 011
Q ss_pred cccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+.+.. +.....+.|.|....|.+.|.|.+...+.+|+.+|..+.
T Consensus 67 ~~~~~---~~~~~~~~F~I~t~~r~~~l~A~s~~e~~~Wi~ai~~~~ 110 (168)
T 2j59_M 67 IDISY---SETKRKNVFRLTTSDCECLFQAEDRDDMLAWIKTIQESS 110 (168)
T ss_dssp EEECS---SSCSCSSEEEEECSSCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEecc---ccCCCCCEEEEEeCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 11111 123456899999999999999999999999999999976
No 68
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Probab=98.03 E-value=1.1e-05 Score=91.57 Aligned_cols=114 Identities=18% Similarity=0.282 Sum_probs=77.0
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEE-eeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCcc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQ-YKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMA 123 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~-hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~ 123 (1100)
.|.|.+++...... .+.+|.|+++ .+.-+|+|.|+|.||..||.+|+. .+|...
T Consensus 25 ~v~I~~~~~~~~~~---~~~~Y~i~v~~~~~~~~~v~RrYsdF~~Lh~~L~~-------------------~fp~e~--- 79 (341)
T 2dyb_A 25 SANIADIEEKRGFT---SHFVFVIEVKTKGGSKYLIYRRYRQFHALQSKLEE-------------------RFGPDS--- 79 (341)
T ss_dssp EEEEEEEEEEESSS---EEEEEEEEEEETTSCEEEEEEEHHHHHHHHHHHHH-------------------HTCC-----
T ss_pred EEEECCeEEecCCC---cEEEEEEEEEEcCCcEEEEEeehHHHHHHHHHHHH-------------------HCchhh---
Confidence 68888886543322 3778999999 446789999999999999998874 133100
Q ss_pred ccccCccccccccccccccccCCCCCCCCCCCCCCcccCCCCccHHHHHHHHHHHHHHHhhcc-ccChhhhhhhhhcccc
Q 001322 124 VVQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGRQHSMSDRAKVAMQQYLNHFLGNMD-IVNSREVCKFLEASKL 202 (1100)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~~~~~~~r~r~~LE~YL~~lL~~~~-~~~~~~l~~FLevS~~ 202 (1100)
+ .....+.+|. ||. +..+++...+.+.|+..||.||+.|+..+. +..+..+..||+....
T Consensus 80 ----------g-----~~~~~~~lp~---lP~-k~~~~~~~~~~e~R~~~Le~yl~~ll~lp~~i~~~~~v~~Ff~~~~~ 140 (341)
T 2dyb_A 80 ----------K-----SSALAXTLPT---LPA-KVYVGVKQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPY 140 (341)
T ss_dssp ----------------------CCCC---CCC-CCCCSCHHHHHHHHHHHHHHHHHHHHHSCHHHHTCHHHHHHHSCCHH
T ss_pred ----------c-----cccccccccC---CCC-ccccCccHHHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHhhccc
Confidence 0 0001233333 442 233444445777788999999999998776 7788999999987664
No 69
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=98.02 E-value=2.3e-05 Score=76.01 Aligned_cols=95 Identities=13% Similarity=0.231 Sum_probs=66.4
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCC---CCCccEEEEEcCCCCCCCCCC
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPF---DTKPMDIIVFDVLPASDGNGE 287 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~---~~~~~~v~lfD~~~~~~~~~~ 287 (1100)
--++|||.|+.. . ...|++|||||++++|.|+++.+ +..|..+|....
T Consensus 6 ~~k~G~L~Kk~~----------------~----~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~--------- 56 (120)
T 4a6h_A 6 EIKSGFLERRSK----------------F----LKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSE--------- 56 (120)
T ss_dssp CSEEEEEEEEET----------------T----TTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGG---------
T ss_pred ccEEEEEEEcCC----------------C----CCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCC---------
Confidence 358999999841 0 14699999999999999998765 455888887642
Q ss_pred Cccccchhhccc-------CCcceeEEEEeCc-------eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 288 GRVSLATEVKER-------NPLRHAFKVTCGV-------RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 288 ~~~~~~~~~~~~-------~~~~~~~~i~~~~-------r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+.... .+. .+..+.|.|.... +.+.|++.|..++.+|+.+|+.+.
T Consensus 57 c~v~~~~--~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~ 117 (120)
T 4a6h_A 57 CTVTEHS--RKNSTSSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILT 117 (120)
T ss_dssp EEEEEEC--CCCC---------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHC
T ss_pred CEEEEcc--cccccccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHh
Confidence 1222110 000 1134567776544 699999999999999999999864
No 70
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=98.01 E-value=2.7e-05 Score=74.06 Aligned_cols=82 Identities=20% Similarity=0.350 Sum_probs=59.7
Q ss_pred CCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeC-ceEEEEEeCchh
Q 001322 245 DNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG-VRSIRLRTRTGA 323 (1100)
Q Consensus 245 ~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~~~~ 323 (1100)
..|++|||||+++.|.|.++..+..+..+|-+.. ..+.... ..+....+|.|.|... .+.+.+.+.|..
T Consensus 18 k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~---------~~~~~~~-~~~~~~r~~~F~l~~~~~~~y~f~A~s~e 87 (112)
T 3cxb_B 18 EHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGG---------EQCGGCR-RANTTDRPHAFQVILSDRPCLELSAESEA 87 (112)
T ss_dssp CCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC----------CEEEEE-ECCCSSCTTEEEEEETTSCCEEEECSSHH
T ss_pred CCceEEEEEEECCEEEEECCCCCCCccceEEecC---------CEEEeee-ccCCCCCCeEEEEEcCCCCEEEEEcCCHH
Confidence 5799999999999999999887777766542211 1111000 0122345689999854 779999999999
Q ss_pred hHHHHHHHHHhcc
Q 001322 324 KVRDWVAAINDAG 336 (1100)
Q Consensus 324 ~~~~w~~~i~~~~ 336 (1100)
.+.+|+.+|..+.
T Consensus 88 e~~~Wi~ai~~~~ 100 (112)
T 3cxb_B 88 EMAEWMQHLCQAV 100 (112)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999876
No 71
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.00 E-value=2.6e-05 Score=77.25 Aligned_cols=101 Identities=15% Similarity=0.228 Sum_probs=72.3
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCC-----eEEEeeCCC-CCCccEEEEEcCCCCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPG-----FLALLADPF-DTKPMDIIVFDVLPAS 282 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s-----~l~~~~~~~-~~~~~~v~lfD~~~~~ 282 (1100)
+.--+||||.|+...+. . ......|++|||||+++ .|.|+++.. +..+..+|.++.-
T Consensus 16 ~~~~~~G~L~K~~~~~~-------------~-~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~--- 78 (150)
T 1wg7_A 16 GGITKHGWLYKGNMNSA-------------I-SVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSC--- 78 (150)
T ss_dssp CCCCCEEEEEECCCCSS-------------H-HHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTC---
T ss_pred CCeeEEEEEEEecCCcc-------------c-cccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccC---
Confidence 45679999998731100 0 01125799999999998 999998776 6678888766531
Q ss_pred CCCCCCccccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 283 DGNGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+... ......+.|.|.... |.+.|.|.+...+.+|+.+|..+.
T Consensus 79 ------~~~~~----~~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai 123 (150)
T 1wg7_A 79 ------MGVVQ----NNKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKIL 123 (150)
T ss_dssp ------CEECC----CCSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ------EEEec----CCCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHH
Confidence 11111 112356899999885 999999999999999999998764
No 72
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=97.99 E-value=1.8e-05 Score=73.18 Aligned_cols=81 Identities=16% Similarity=0.340 Sum_probs=54.6
Q ss_pred CCCceEEEEEcCCeEEEeeCCCC----CCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCc-eEEEEEe
Q 001322 245 DNWQKVWAVLKPGFLALLADPFD----TKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRT 319 (1100)
Q Consensus 245 ~~w~krW~vvk~s~l~~~~~~~~----~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~ 319 (1100)
..|++|||||+++.|.|.+++.+ ..+...+.+|.. ...+.++. +.....+.|.|.... |.+.|.|
T Consensus 21 ~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~-------~~~~~~~~---~~~~~~~~F~i~~~~~~~~~~~A 90 (106)
T 1btn_A 21 RSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLK-------EAICEVAL---DYKKKKHVFKLRLSDGNEYLFQA 90 (106)
T ss_dssp CCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECT-------TCEEEECS---SCCSSSSEEEEECTTSCEEEEEC
T ss_pred CChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECC-------CCEEEEcc---cccCCccEEEEEecCCCEEEEEC
Confidence 57999999999999999987642 111111222211 01111111 123346899998654 9999999
Q ss_pred CchhhHHHHHHHHHhc
Q 001322 320 RTGAKVRDWVAAINDA 335 (1100)
Q Consensus 320 ~~~~~~~~w~~~i~~~ 335 (1100)
.|...+.+|+.+|..+
T Consensus 91 ~s~~e~~~Wi~ai~~A 106 (106)
T 1btn_A 91 KDDEEMNTWIQAISSA 106 (106)
T ss_dssp SSHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHhcC
Confidence 9999999999999863
No 73
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=97.98 E-value=7.4e-06 Score=94.49 Aligned_cols=105 Identities=13% Similarity=0.197 Sum_probs=68.4
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEeeeeEEEEEEehhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCccc
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYKQFKWKLVKKASQVFYLHFALKRRAFFEEIQEKQEQVKEWLQNLGMGDHMAV 124 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG~fkWtIkRkykdf~~LH~~LK~~~~~~~~~~~~~~~k~~~~~lp~~~~~~~ 124 (1100)
.|.|.+-+.....+-...+++|+|.++.. .|+|.|+|+||..||.+|+. . ...+.+||
T Consensus 43 ~i~V~dp~k~~~~~g~~~y~~Y~I~~~~~--~~~V~RRYsdF~~L~~~L~~------------~----~p~~~iP~---- 100 (386)
T 4akv_A 43 ACSVEDPTKQTKFKGIKSYISYKLTPTHA--ASPVYRRYKHFDWLYNRLLH------------K----FTVISVPH---- 100 (386)
T ss_dssp CEEEECC------------CCEEEEETTS--SSCEEECHHHHHHHHHHHHH------------H----CSSSCCCC----
T ss_pred EEEEcCceEecCCCCCcCeEEEEEEEEeC--CeEEEcCHHHHHHHHHHHHH------------h----CCCCCCCC----
Confidence 68888866644111112488999998754 69999999999999998873 1 11122222
Q ss_pred cccCccccccccccccccccCCCCCCCCCCCCCCcccC-CCCccHHHHHHHHHHHHHHHhhccccChhhhhhhhhcc
Q 001322 125 VQEDDEGDEIAVNHDESSKKRDVPANAALPVIRPALGR-QHSMSDRAKVAMQQYLNHFLGNMDIVNSREVCKFLEAS 200 (1100)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~r~~l~~-~~~~~~r~r~~LE~YL~~lL~~~~~~~~~~l~~FLevS 200 (1100)
||. +..+++ .+.+.++||..||.||+.++..+.++++..+..||+.+
T Consensus 101 ----------------------------lP~-K~~~g~~~~~fie~Rr~~Le~fL~~i~~~p~l~~s~~~~~FL~~~ 148 (386)
T 4akv_A 101 ----------------------------LPE-KQATGRFEEDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCL 148 (386)
T ss_dssp ----------------------------CCC-CC------CCTTTHHHHHHHHHHHHHHTCTTGGGCHHHHHHHSCC
T ss_pred ----------------------------CCC-CcccCCCCHHHHHHHHHHHHHHHHHHhCCHhhhCCcHHHHHhCCC
Confidence 232 222332 45666777889999999999999999999999999986
No 74
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=97.98 E-value=3e-05 Score=75.61 Aligned_cols=101 Identities=14% Similarity=0.262 Sum_probs=68.9
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCC-----------CCCccEEEEEcC
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPF-----------DTKPMDIIVFDV 278 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~-----------~~~~~~v~lfD~ 278 (1100)
.-.|||||.+++.. .||. ... ..|++|||||+++.|.|.+++. +..+..+|-+..
T Consensus 11 ~~~k~G~L~kk~~~--~~G~-----------~~~-k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~ 76 (129)
T 2p0d_A 11 EVEKSGLLNMTKIA--QGGR-----------KLR-KNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRG 76 (129)
T ss_dssp SEEEEEEEEEEEEE--ETTE-----------ECC-CCCEEEEEEEESSEEEEESCC--------------CCSEEEECTT
T ss_pred ceeEEEEEEEeeec--cCCC-----------cCC-CCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCC
Confidence 34599999886421 1110 011 5799999999999999999873 345666654432
Q ss_pred CCCCCCCCCCccccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 279 LPASDGNGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+..+. +....++.|.|.+.. +...|.|.|..++.+|+.+|..+.
T Consensus 77 ---------~~v~~~~---~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~i 123 (129)
T 2p0d_A 77 ---------AALAHGR---HLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTVI 123 (129)
T ss_dssp ---------CEEEECT---TSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred ---------cEEEECC---CCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 2232221 233456899998764 678999999999999999998865
No 75
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=97.98 E-value=5.5e-06 Score=79.52 Aligned_cols=96 Identities=17% Similarity=0.307 Sum_probs=62.7
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEc-CCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCcc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK-PGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk-~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
-+||||.|+.. . ...|++|||||+ ++.|.|.++..+..+..+|-++... + ...
T Consensus 9 ~~~G~L~K~g~----------------~----~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~-~-----~~~ 62 (125)
T 1unq_A 9 VKEGWLHKRGE----------------Y----IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFS-V-----AQC 62 (125)
T ss_dssp EEEEEEEEECS----------------S----SCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEE-C-----TTC
T ss_pred eEEeeEEeccC----------------C----ccCccCcEEEEecCCEEEEEeCCCCCCCCceeEcccee-E-----Eee
Confidence 59999998721 0 157999999999 5799999876554432222111100 0 000
Q ss_pred ccchhhcccCCcceeEEEEe----CceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 291 SLATEVKERNPLRHAFKVTC----GVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~----~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+. .......+.|.|.+ ..|.+.|.+.|...+.+|+.+|..+.
T Consensus 63 ~~~---~~~~~~~~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~ 109 (125)
T 1unq_A 63 QLM---KTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVA 109 (125)
T ss_dssp EEE---EECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred eec---ccccCCCCEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHH
Confidence 000 01123468899984 57899999999999999999998764
No 76
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.96 E-value=2.3e-05 Score=75.37 Aligned_cols=104 Identities=19% Similarity=0.288 Sum_probs=70.1
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEc--CCeEEEeeCC-CCCCccEEEEEcCCCCCCCCC
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK--PGFLALLADP-FDTKPMDIIVFDVLPASDGNG 286 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk--~s~l~~~~~~-~~~~~~~v~lfD~~~~~~~~~ 286 (1100)
.--+||||.|+.. . ...|++|||||+ .++|.|.+++ .+..+..+|-++.-.......
T Consensus 17 ~~~~~G~L~K~g~---------------~-----~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~ 76 (129)
T 1x1g_A 17 TVVKQGYLAKQGH---------------K-----RKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALED 76 (129)
T ss_dssp EEEEEEEEEEECS---------------S-----SSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCS
T ss_pred CEEEEEEEEEECC---------------C-----CCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCC
Confidence 3469999998721 0 157999999999 3799999877 667788777665310000000
Q ss_pred CCccccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhccC
Q 001322 287 EGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
. ..... +..+...+.|.|.... |.+.|.|.+...+.+|+.+|..+..
T Consensus 77 ~---~~p~~-~~~~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 77 N---GVPTG-VKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp S---SSCSS-CSSCCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred C---CCccc-ccCCCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 0 00000 0011146889998886 6799999999999999999999863
No 77
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.95 E-value=1.6e-05 Score=75.99 Aligned_cols=92 Identities=20% Similarity=0.316 Sum_probs=68.8
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEc--CCeEEEeeCCCCC--CccEEEEEcCCCCCCCC
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK--PGFLALLADPFDT--KPMDIIVFDVLPASDGN 285 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk--~s~l~~~~~~~~~--~~~~v~lfD~~~~~~~~ 285 (1100)
.--+||||.|+.. -...|++|||||+ +..|.|.+++.+. ++..+|-++.-
T Consensus 7 ~~~~~G~L~K~~~--------------------~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~------ 60 (120)
T 2d9x_A 7 GENVYGYLMKYTN--------------------LVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGA------ 60 (120)
T ss_dssp CCCCEEEEEEEEE--------------------TTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTC------
T ss_pred CCcEEEEEEecCC--------------------CCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceE------
Confidence 4569999998731 0146999999999 6899999876653 67777766531
Q ss_pred CCCccccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 286 GEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+.. .....+.|.|.... |.+.|.|.+...+.+|+.+|..+.
T Consensus 61 ---~v~~------~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~ 103 (120)
T 2d9x_A 61 ---VISP------SDEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICT 103 (120)
T ss_dssp ---CEEC------CSSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHH
T ss_pred ---EEEe------cCCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 2221 11235889998875 999999999999999999998764
No 78
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=97.95 E-value=1.3e-05 Score=77.64 Aligned_cols=100 Identities=17% Similarity=0.262 Sum_probs=68.0
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCC---CCccEEEEEcCCCCCCCCCC
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFD---TKPMDIIVFDVLPASDGNGE 287 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~---~~~~~v~lfD~~~~~~~~~~ 287 (1100)
--++|||.|+.. |+ . ...|++|||||+++.|.|.+++.+ ..+..+|-+..-..
T Consensus 5 v~~~G~L~K~~~----~~---------~-----~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~------ 60 (134)
T 2y7b_A 5 VEERGFLTIFED----VS---------G-----FGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTS------ 60 (134)
T ss_dssp CCEEEEEEEEEE----ET---------T-----EEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCS------
T ss_pred ceEEeeEEEEcC----CC---------C-----CCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCcc------
Confidence 358999998831 10 0 147999999999999999986644 67888876654110
Q ss_pred CccccchhhcccCCcceeEEEEeC--------------------ceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 288 GRVSLATEVKERNPLRHAFKVTCG--------------------VRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~i~~~--------------------~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+.... .+.....+.|.|.+. .|++.|.|.|...+.+|+.+|..+.
T Consensus 61 ~~v~~~~--~~~~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~~i 127 (134)
T 2y7b_A 61 RQIEPAN--REFCARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQVL 127 (134)
T ss_dssp SSCEECC--TTTCCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccccccc--hhhccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHHHH
Confidence 0111111 011234578888752 2579999999999999999998764
No 79
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=97.93 E-value=2.4e-05 Score=95.69 Aligned_cols=121 Identities=17% Similarity=0.220 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhccc-----EEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecCCCCCCCCCCCCC
Q 001322 765 IHCAYCSLIEKAEH-----FIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGG 839 (1100)
Q Consensus 765 I~~ayl~aI~~A~h-----fIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~~P~F~G~~~~~~ 839 (1100)
...+++++|++|++ .|.|+ .|.++.. ..|.+||.++ +++ |++|+|++.....|. ..
T Consensus 353 sf~~vi~~I~~A~~DP~V~sIk~t-lYr~~~d-------s~Iv~ALi~A----A~r--Gv~V~vLvel~arfd-----ee 413 (705)
T 2o8r_A 353 TYDYVVRLLMEAAISPDVSEIRLT-QYRVAEN-------SSIISALEAA----AQS--GKKVSVFVELKARFD-----EE 413 (705)
T ss_dssp CSHHHHHHHHHHHTCTTEEEEEEE-ESCCCSC-------CHHHHHHHHH----HHT--TCEEEEEECCCSCC--------
T ss_pred hHHHHHHHHHHhccCCCceEEEEE-EEEEcCC-------HHHHHHHHHH----HHC--CCEEEEEEeCCCCcc-----hh
Confidence 35688999999999 99975 5555532 2677777654 443 899999998654321 00
Q ss_pred chhHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCcccccccccccccccccCCCCccccceeeeeeEEEEeCc--------
Q 001322 840 AASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDS-------- 911 (1100)
Q Consensus 840 ~~s~r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi~f~~Lr~~~~~~~~g~~vte~iyvHSKlmIVDD~-------- 911 (1100)
+ .....++|.++ |+.+. |++ .+ ..+|+|++|||++
T Consensus 414 ~-----------------ni~wa~~Le~a-Gv~Vv-----~g~-------~~-------lk~H~Ki~lIdrr~~~~g~~~ 456 (705)
T 2o8r_A 414 N-----------------NLRLSERMRRS-GIRIV-----YSM-------PG-------LKVHAKTALILYHTPAGERPQ 456 (705)
T ss_dssp ------------------CHHHHHHHHHH-TCEEE-----ECC-------TT-------CCBCCCEEEEEECCCSSSCCC
T ss_pred h-----------------hHHHHHHHHHC-CCEEE-----Ecc-------CC-------CCceeEEEEEecccccCCcee
Confidence 0 01245678884 87652 121 12 3789999999988
Q ss_pred -EEEEcccccCcCccCCCCCcceeEEEEcCccc
Q 001322 912 -IALIGSANINDRSLLGSRDSEIGVLIEDKESV 943 (1100)
Q Consensus 912 -~~iIGSANiN~RSm~G~~DsEi~v~I~d~~~~ 943 (1100)
++.+|++|+|+.+.. .-+++++.+.+++.+
T Consensus 457 ~y~~igtGN~n~~tar--iy~D~~l~t~~~~i~ 487 (705)
T 2o8r_A 457 GIALLSTGNFNETTAR--IYSDTTLMTANTDIV 487 (705)
T ss_dssp EEEEEESSCSSCCCSS--CEEEEEEEECCHHHH
T ss_pred EEEeccccceeeeEEE--EEeeeeeeecChHHH
Confidence 688899999999994 788999999888754
No 80
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.88 E-value=1.8e-05 Score=75.85 Aligned_cols=107 Identities=19% Similarity=0.282 Sum_probs=68.8
Q ss_pred CCCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCC----ccEEEEEcCCCCCC
Q 001322 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTK----PMDIIVFDVLPASD 283 (1100)
Q Consensus 208 ~g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~----~~~v~lfD~~~~~~ 283 (1100)
.+.--+||||.++......| . . .-...|++|||||+++.|.|.+++.+.. +...+.+|..
T Consensus 5 ~~~v~~eG~L~kk~~~~~~g--k-------~---~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~---- 68 (123)
T 1wjm_A 5 SSGEQMEGMLCRKQEMEAFG--K-------K---AANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLA---- 68 (123)
T ss_dssp CCCCCEEEEEEEEEEEEETT--E-------E---CSCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECT----
T ss_pred CCCeEEEEEEEEEEEEeCCC--c-------c---CCCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEcc----
Confidence 34556999999874211001 0 0 0125799999999999999998764422 1111222211
Q ss_pred CCCCCccccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 284 GNGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+..+..+. +....++.|.|.+.. +.+.|.|.|...+.+|+.+|+.+.
T Consensus 69 ---~~~~~~~~---~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~ 116 (123)
T 1wjm_A 69 ---RAQGSVAF---DYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAI 116 (123)
T ss_dssp ---TCEEEECT---TCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred ---CcEEeecc---cccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHH
Confidence 01122221 223457899998765 899999999999999999999865
No 81
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=97.82 E-value=5.4e-05 Score=87.31 Aligned_cols=103 Identities=19% Similarity=0.252 Sum_probs=73.5
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCcc
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
--|+|||.|+.. . ....|++|||||++..|.|++++.+..+..+|.+...... ..+
T Consensus 269 ~~k~G~L~K~g~----------------~---~~k~WKkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~-----~~v 324 (386)
T 3lju_X 269 YLKEGYMEKTGP----------------K---QTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESG-----YTV 324 (386)
T ss_dssp CSEEEEEEECCT----------------T---SCSCCEEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGT-----CEE
T ss_pred cceeeeEEEECC----------------C---CCCCCcccEEEEECCEEEEEecCCCcccceEEEeecceee-----eee
Confidence 358999998621 0 0147999999999999999999988888888876431100 011
Q ss_pred ccchhhc-ccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhccC
Q 001322 291 SLATEVK-ERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 291 ~~~~~~~-~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
..+.... ..+...++|.|....|++.|.+.|...+.+|+.+|..+..
T Consensus 325 ~~~~~~~~~~~~~~~~F~I~t~~rty~l~A~s~~e~~~Wi~aL~~~i~ 372 (386)
T 3lju_X 325 LHGFPPSTQGHHWPHGITIVTPDRKFLFACETESDQREWVAAFQKAVD 372 (386)
T ss_dssp EESCCTTCCSCCSCEEEEEECSSCEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cccCCccccccCCCcEEEEEeCCeEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 1001000 0111258999999999999999999999999999998763
No 82
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=97.73 E-value=0.00012 Score=84.07 Aligned_cols=95 Identities=19% Similarity=0.267 Sum_probs=65.3
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCcc
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
--|||||.|+... + .....|++||||++++.|.|.++. +..+..+ +|.. ...+
T Consensus 278 ~~k~G~L~K~~~~--------------~---~~~~~WkkRwfvL~~~~L~y~k~~-~~~~~~~--i~l~-------~~~v 330 (385)
T 2q13_A 278 TRKAGYLNARNKT--------------G---LVSSTWDRQFYFTQGGNLMSQARG-DVAGGLA--MDID-------NCSV 330 (385)
T ss_dssp SCCEEEEEEC-------------------------CCEEEEEEEETTEEEEECSS-CSSCEEE--EECT-------TCEE
T ss_pred ccEEEEEEEecCC--------------C---CCcCCceeEEEEEECCEEEEecCC-CcCCCce--EEcc-------ceEE
Confidence 3699999987310 0 011359999999999999999873 3334333 3321 1122
Q ss_pred ccchhhcccCCcceeEEEEeCc--eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 291 SLATEVKERNPLRHAFKVTCGV--RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~--r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
... +....++.|.|.+.. |++.|.|.|...+.+|+.+|..+.
T Consensus 331 ~~~----~~~~r~~~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~ 374 (385)
T 2q13_A 331 MAV----DCEDRRYCFQITSFDGKKSSILQAESKKDHEEWICTINNIS 374 (385)
T ss_dssp EEE----CCTTCSSEEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHH
T ss_pred Eec----cccCCCceEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHH
Confidence 211 123456899999988 999999999999999999999875
No 83
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=97.68 E-value=8.2e-05 Score=71.97 Aligned_cols=97 Identities=11% Similarity=0.192 Sum_probs=64.7
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCC---------CCccEEEEEcCC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFD---------TKPMDIIVFDVL 279 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~---------~~~~~v~lfD~~ 279 (1100)
..--|||+|.|+.. . ...|++|||||+++.|.|.+++.. ..+..+|-+..
T Consensus 10 ~~~~k~G~L~K~g~----------------~----~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~- 68 (124)
T 2w2x_D 10 DEHKQQGELYMWDS----------------I----DQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNT- 68 (124)
T ss_dssp ---CCEEEEEEEET----------------T----TTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGG-
T ss_pred hhcceeEEEEEECC----------------C----CCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCC-
Confidence 34469999998731 0 146999999999999999987421 12244443321
Q ss_pred CCCCCCCCCccccchhhcccCCcceeEEEEeC---ceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 280 PASDGNGEGRVSLATEVKERNPLRHAFKVTCG---VRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+....+ +.....+.|+|.+. .+.+.|.|.|...+.+|+.+|..+.
T Consensus 69 --------~~v~~~~~--~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~a~ 118 (124)
T 2w2x_D 69 --------YNVVKAPQ--GKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIREIT 118 (124)
T ss_dssp --------EEEEECTT--CBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHHHH
T ss_pred --------CEEEEccC--CcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHHHH
Confidence 11211110 11235689999875 4679999999999999999999876
No 84
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=97.67 E-value=0.00011 Score=71.08 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=31.1
Q ss_pred cceeEEEEeCc-eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 302 LRHAFKVTCGV-RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 302 ~~~~~~i~~~~-r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.++.|.|.... |++.|.|.|...+.+|+.+|..+.
T Consensus 88 ~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~~i 123 (128)
T 2rlo_A 88 ENFEFLIVSSTGQTWHFEAASFEERDAWVQAIESQI 123 (128)
T ss_dssp CCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 46889998887 999999999999999999998753
No 85
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=97.66 E-value=0.00014 Score=82.59 Aligned_cols=92 Identities=16% Similarity=0.322 Sum_probs=68.9
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~ 291 (1100)
-++|||.|+. | . ...|++||||++++.|.|.+++.+..+..+|.++.- .+.
T Consensus 214 ~k~G~L~K~g-----~----------~-----~k~WkkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~---------~v~ 264 (347)
T 2r09_A 214 DREGWLLKLG-----G----------R-----VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENL---------SIR 264 (347)
T ss_dssp CEEEEEEEEC-----S----------S-----SCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTC---------EEE
T ss_pred ccCCeeEecC-----C----------C-----cccceeEEEEEcCCEEEEEcCCCccCCcEEEEcCCe---------EEE
Confidence 6999998872 1 0 157999999999999999998888888888876531 111
Q ss_pred cchhhcccCCcceeEEEEeC----------------------ceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 292 LATEVKERNPLRHAFKVTCG----------------------VRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~~----------------------~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.. +.....+.|.|.+. .|.+.|.|.|...+.+|+.+|..+.
T Consensus 265 ~~----~~~~~~~~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai 327 (347)
T 2r09_A 265 EV----EDPRKPNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 327 (347)
T ss_dssp EE----CCSSCSSEEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHH
T ss_pred Ec----cCCCCCCEEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 11 11233566666543 5899999999999999999999875
No 86
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=97.60 E-value=0.0002 Score=78.45 Aligned_cols=80 Identities=19% Similarity=0.318 Sum_probs=59.2
Q ss_pred CCCceEEEEEcCCeEEEeeCC------CCCCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEe-CceEEEE
Q 001322 245 DNWQKVWAVLKPGFLALLADP------FDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTC-GVRSIRL 317 (1100)
Q Consensus 245 ~~w~krW~vvk~s~l~~~~~~------~~~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~r~l~l 317 (1100)
..|++||||++++.|.|+++. .+..+..+|-++. ..+... .+....++.|.|.+ ..+...|
T Consensus 37 K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~---------~~v~~~---~~~~kk~~~F~I~t~~~r~y~f 104 (263)
T 3a8p_A 37 RKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAED---------SIVQSV---PEHPKKEHVFCLSNSCGDVYLF 104 (263)
T ss_dssp CCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTT---------CEEEEC---TTCSSCSSEEEEECTTSCEEEE
T ss_pred CCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCC---------cEEEEC---CcCCCCCCEEEEEcCCCcEEEE
Confidence 579999999999999999974 3445666654431 122211 12223478999998 6899999
Q ss_pred EeCchhhHHHHHHHHHhcc
Q 001322 318 RTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 318 ~~~~~~~~~~w~~~i~~~~ 336 (1100)
.|.|...+.+|+.+|..+.
T Consensus 105 ~A~s~ee~~~Wi~aI~~a~ 123 (263)
T 3a8p_A 105 QATSQTDLENWVTAIHSAC 123 (263)
T ss_dssp ECSSHHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999875
No 87
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=97.58 E-value=9.5e-05 Score=81.06 Aligned_cols=79 Identities=13% Similarity=0.174 Sum_probs=61.7
Q ss_pred CCceEEEEEcCC-------eEEEeeCCCC-----CCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCce
Q 001322 246 NWQKVWAVLKPG-------FLALLADPFD-----TKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVR 313 (1100)
Q Consensus 246 ~w~krW~vvk~s-------~l~~~~~~~~-----~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r 313 (1100)
.|+||||||++. .|.|.++..+ .++..+|-++.-. .|... ......+.|.|.+..|
T Consensus 21 ~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~--------~V~~~----~~~~~~~~F~I~t~~r 88 (264)
T 1qqg_A 21 SMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCF--------NINKR----ADSKNKHLVALYTRDE 88 (264)
T ss_dssp TCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEE--------EEEEE----CCSSCSSEEEEEESSC
T ss_pred CCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceE--------EEEec----cCCCCCcEEEEEECCE
Confidence 599999999998 9999987765 5788887665311 11111 1123468999999999
Q ss_pred EEEEEeCchhhHHHHHHHHHhcc
Q 001322 314 SIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 314 ~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+.|.|.|...+.+|+.+|..+.
T Consensus 89 ty~l~A~se~e~~~Wi~aL~~~~ 111 (264)
T 1qqg_A 89 HFAIAADSEAEQDSWYQALLQLH 111 (264)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999976
No 88
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=0.00017 Score=71.06 Aligned_cols=80 Identities=18% Similarity=0.321 Sum_probs=60.1
Q ss_pred CCCceEEEEEcCCeEEEeeCCCCC--CccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeC----ceEEEEE
Q 001322 245 DNWQKVWAVLKPGFLALLADPFDT--KPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG----VRSIRLR 318 (1100)
Q Consensus 245 ~~w~krW~vvk~s~l~~~~~~~~~--~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~r~l~l~ 318 (1100)
..|++|||++++.+|.|.+++++. .|..+|.... .++. .... ..+.+++|++... .|.+.|+
T Consensus 26 K~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~g---------ceV~--pd~~-~~~~kf~ikl~iPs~~g~r~y~l~ 93 (137)
T 2ys3_A 26 KGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKG---------CEVV--PDVN-VSGQKFCIKLLVPSPEGMSEIYLR 93 (137)
T ss_dssp SSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTT---------CEEE--ECCB-GGGTBEEEEEEEECSSSEEEEEEE
T ss_pred ccceeEEEEEeCCEEEEECCchhccCCCceEEECCC---------CEEe--cccc-ccCCceEEEEEccCCCCceEEEEE
Confidence 468899999999999999888774 7877776542 1221 1100 0235688877754 4999999
Q ss_pred eCchhhHHHHHHHHHhcc
Q 001322 319 TRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 319 ~~~~~~~~~w~~~i~~~~ 336 (1100)
|.|+.++.+|++++..+.
T Consensus 94 cdsEeqy~~WMaA~rlAs 111 (137)
T 2ys3_A 94 CQDEQQYARWMAGCRLAS 111 (137)
T ss_dssp ESSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 999999999999999876
No 89
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=97.54 E-value=0.00016 Score=79.07 Aligned_cols=100 Identities=15% Similarity=0.186 Sum_probs=70.0
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCcc
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
..+||||.|+.. + . ..|++|||||+++.|.|+++..+..+..++.+..... ..+
T Consensus 168 p~~~G~L~k~~~---------------~----~-k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~------~~v 221 (291)
T 3tca_A 168 PELEGALYLKED---------------G----K-KSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFEN------VNI 221 (291)
T ss_dssp CCCEEEEEEECT---------------T----S-SCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGG------CEE
T ss_pred CceEEEEEEeCC---------------C----C-CCceEEEEEEeCCEEEEEecCccccccCceeecccee------EEE
Confidence 458999999831 0 1 4799999999999999998887777776654432110 112
Q ss_pred ccchhh--cccCCcceeEEEEeCc------eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 291 SLATEV--KERNPLRHAFKVTCGV------RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 291 ~~~~~~--~~~~~~~~~~~i~~~~------r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+... ....+..|+|.|.... +...|.|.|...+..|+.+|..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~F~i~~~~~~~~~~~~~~l~A~s~~e~~~Wi~air~Ak 275 (291)
T 3tca_A 222 YYGIQCKMKYKAPTDHCFVLKHPQIQKESQYIKYLCCDDARTLSQWVMGIRIAK 275 (291)
T ss_dssp EEECSHHHHHCCSSSCEEEEECTTCCSCCTTSEEEECSSHHHHHHHHHHHHHHH
T ss_pred EecCccccccCCCCCeEEEEEcCCCCCCCceEEEEECCCHHHHHHHHHHHHHHh
Confidence 111111 1234567999997643 558899999999999999998753
No 90
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=97.54 E-value=0.00013 Score=84.28 Aligned_cols=92 Identities=20% Similarity=0.333 Sum_probs=67.1
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEE--cCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVL--KPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vv--k~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
.|||||.|+.. . ...|++||||| +++.|.|++++.+.++..+|.++.. .
T Consensus 147 ~keG~L~KrG~----------------~----~k~WkrRwFVL~~~~~~L~Yy~~~~~~~p~g~I~L~~~---------~ 197 (386)
T 3lju_X 147 YREGFLWKRGR----------------D----NGQFLSRKFVLTEREGALKYFNRNDAKEPKAVMKIEHL---------N 197 (386)
T ss_dssp EEEEEEEEECS----------------S----SCCEEEEEEEEETTTTEEEEEC-----CCSEEEEGGGE---------E
T ss_pred ccccceeeecc----------------c----cCCceEEEEEEEcCCCEEEEECCCCccCcccEEEeecc---------E
Confidence 49999999821 0 15799999999 9999999999888899999988642 1
Q ss_pred cccchhhcccCCcceeEEEE----eCceEEEEEeCchhhHHHHHHHHHhc
Q 001322 290 VSLATEVKERNPLRHAFKVT----CGVRSIRLRTRTGAKVRDWVAAINDA 335 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~----~~~r~l~l~~~~~~~~~~w~~~i~~~ 335 (1100)
.... . +..+..++|.|. ++.|.+.|.+.|...+.+|+.+|..+
T Consensus 198 ~~~~-~--~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~a 244 (386)
T 3lju_X 198 ATFQ-P--AKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRAA 244 (386)
T ss_dssp EEEC-H--HHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred EEEc-c--cccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhhc
Confidence 1111 1 112345788887 67899999999999999999999875
No 91
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=97.52 E-value=0.00015 Score=69.61 Aligned_cols=110 Identities=20% Similarity=0.351 Sum_probs=67.3
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCcc
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
--|||||.+++.....| .. .-...|+++||||+++.|.|.+++.+..+...+.+.....++.. ...+
T Consensus 8 v~k~G~L~rK~~~~~~g-kk-----------~~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~-~~~v 74 (122)
T 1dro_A 8 EGHEGYVTRKHEWDSTT-KK-----------ASNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQ-NAAI 74 (122)
T ss_dssp SSEEEEEEEECSCCCCC-CT-----------TCCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCS-SCCC
T ss_pred eEEEEEEEEEEEEeCCC-cc-----------CCCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECC-CCEE
Confidence 45999998875321111 00 01257999999999999999988754432100000000001100 1122
Q ss_pred ccchhhcccCCcceeEEEEe-CceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 291 SLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+. +....++.|+|.. ..+...|.|.|...+.+|+.+|+.+.
T Consensus 75 ~~~~---d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~i 118 (122)
T 1dro_A 75 EIAS---DYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQS 118 (122)
T ss_dssp EECC---SSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHHH
T ss_pred EeCC---CCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 2221 2234568999985 56899999999999999999999876
No 92
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=97.34 E-value=0.0002 Score=82.85 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=63.8
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVS 291 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~ 291 (1100)
-|||||.||... | . -...|.|||||++++.|.|.+.... .+..++ |.. ...+.
T Consensus 302 ~k~G~L~k~~~~---g----------~----~~~~W~rrwfvl~~~~l~y~~~~~~-~~~~~~--~l~-------~~~v~ 354 (407)
T 4h8s_A 302 QKAGYLNLRNKT---G----------L----VTTTWERLYFFTQGGNLMCQPRGAV-AGGLIQ--DLD-------NCSVM 354 (407)
T ss_dssp CCEEEEEEEEEC---S----------S----SCEEEEEEEEEECSSCEECCCTTCS-SCCCCB--CSS-------CCEEE
T ss_pred eeeceeeeeccC---C----------C----CCCCceEEEEEEECCEEEEEeCCCC-CCCeEE--ECC-------ceEEE
Confidence 489999998531 1 0 0146999999999999999975432 222221 210 12222
Q ss_pred cchhhcccCCcceeEEEEeCc--eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 292 LATEVKERNPLRHAFKVTCGV--RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 292 ~~~~~~~~~~~~~~~~i~~~~--r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
... ....++.|.|...+ |++.|.+.|...+.+|+.+|+.+.
T Consensus 355 ~~~----~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~ai~~a~ 397 (407)
T 4h8s_A 355 AVD----CEDRRYCFQITTPNGKSGIILQAESRKENEEWICAINNIS 397 (407)
T ss_dssp EEC----CTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHHHHHHH
T ss_pred ECC----CCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHHHHHHH
Confidence 211 23457899998754 679999999999999999999876
No 93
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=97.32 E-value=0.00097 Score=72.70 Aligned_cols=98 Identities=13% Similarity=0.215 Sum_probs=68.8
Q ss_pred cceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEE-cCCCCCCCCCCCcc
Q 001322 212 LKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVF-DVLPASDGNGEGRV 290 (1100)
Q Consensus 212 gkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lf-D~~~~~~~~~~~~~ 290 (1100)
.+||+|.++..+ ...|+||||+||+|.|.|.++..+....++..| +- . +..+
T Consensus 133 ~~~G~L~~ke~~--------------------~K~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L-~------~~~v 185 (256)
T 3hk0_A 133 EIQGFLHVKELG--------------------KKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADL-E------DSNI 185 (256)
T ss_dssp EEEEEEEEECTT--------------------SSCEEEEEEEEETTEEEEESSTTCCCGGGEEEEECC-T------TEEE
T ss_pred cceeEEEEecCC--------------------CCcceEEEEEEeCCEEEEEecCCCCccccceEEEEc-C------CCEE
Confidence 599999887310 157999999999999999987766667776433 32 1 1334
Q ss_pred ccchh--hcccCCcceeEEEEeCce------EEEEEeCchhhHHHHHHHHHhcc
Q 001322 291 SLATE--VKERNPLRHAFKVTCGVR------SIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 291 ~~~~~--~~~~~~~~~~~~i~~~~r------~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+.. -+-..|..++|.|..... ...|-|.+......|+.+|..+.
T Consensus 186 y~~~~~kKk~kaPt~~~F~ik~~k~~~~~~~~~~lcaede~~~~~W~~aIr~ak 239 (256)
T 3hk0_A 186 FSLIAGRKQYNAPTDHGLCIKPNKVRNETKELRLLCAEDEQTRTSWMTAFRLLK 239 (256)
T ss_dssp EEESSTHHHHCCSSSEEEEEEETTCSSCCTTCEEEEESSHHHHHHHHHHHHHHH
T ss_pred EEecccccccCCCCCCEEEEEcccccCCCceEEEEEeCCHHHHHHHHHHHHHHH
Confidence 33321 122457789999985432 36778888999999999998764
No 94
>3hpc_X SNX5 protein; sprting nexin, PHOX, SNX5-PX, phosphatidylinositol, PI(4,5)P2, cell adhesion, protein transport; 1.47A {Rattus norvegicus} PDB: 3hpb_A
Probab=97.30 E-value=0.00057 Score=69.54 Aligned_cols=44 Identities=11% Similarity=0.254 Sum_probs=34.8
Q ss_pred eEEEeeeeecCCCCCCCceeEEEEEEEee-----eeEEEEEEehhhHHHHHHHHH
Q 001322 45 KASIVSVSRPDAGDISPMLLSYTIEVQYK-----QFKWKLVKKASQVFYLHFALK 94 (1100)
Q Consensus 45 ~v~I~~ver~~s~~~~~~~~~YtIEl~hG-----~fkWtIkRkykdf~~LH~~LK 94 (1100)
.|.|.+...... ++.|+|..+-. .-.|+|.|+|+||..||..|.
T Consensus 13 ~i~V~dp~~~~~------~v~Y~I~t~t~~p~f~~~~~~V~RRysdF~~L~~~L~ 61 (161)
T 3hpc_X 13 QIDIPDALSERD------KVKFTVHTKTTLPTFQSPEFSVTRQHEDFVWLHDTLT 61 (161)
T ss_dssp EEEEEEEEEETT------EEEEEEEEEECCTTSSSSEEEEEECHHHHHHHHHHHH
T ss_pred EEEECCCeEecC------CEEEEEEEEeCCcccCCCcceEEecHHHHHHHHHHHH
Confidence 677777654332 68999998754 348999999999999999776
No 95
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=97.25 E-value=0.002 Score=63.01 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=69.0
Q ss_pred ceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCC---------CCCccEEEEEcCCCCCC
Q 001322 213 KEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPF---------DTKPMDIIVFDVLPASD 283 (1100)
Q Consensus 213 keg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~---------~~~~~~v~lfD~~~~~~ 283 (1100)
.||||..+...+. | ... -...|+++|||++++.|.|++... +..|..++.+..
T Consensus 3 ~~G~L~rk~llK~-G-~k~-----------~~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g----- 64 (126)
T 2dtc_A 3 MEGPLRRKTLLKE-G-RKP-----------ALSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVG----- 64 (126)
T ss_dssp EEEEEEEEEEEBT-T-BCC-----------SSCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTT-----
T ss_pred eeeeeeeeehhhc-C-Ccc-----------cccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCC-----
Confidence 5899987754331 2 110 015799999999999999998442 335666665542
Q ss_pred CCCCCccccchhhcccCCcceeEEEEeC--ceEEEEEeCchhhHHHHHHHHHhccC
Q 001322 284 GNGEGRVSLATEVKERNPLRHAFKVTCG--VRSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
..|... +.....+-|.|.+. +....+.|.|...+..|+.+|..+..
T Consensus 65 ----~~V~~~----e~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~ 112 (126)
T 2dtc_A 65 ----WMVQLP----DDPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACK 112 (126)
T ss_dssp ----CEEECC----CCTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHT
T ss_pred ----CEEEec----CCCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 223211 22224578999865 67899999999999999999999874
No 96
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=97.23 E-value=0.0014 Score=63.35 Aligned_cols=106 Identities=14% Similarity=0.250 Sum_probs=67.3
Q ss_pred CCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCc----------cEEEEEcC
Q 001322 209 GPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKP----------MDIIVFDV 278 (1100)
Q Consensus 209 g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~----------~~v~lfD~ 278 (1100)
|.-.|||+|.+++.... | . ......|+++||||+++.|.|++|..+... .-...+|.
T Consensus 6 ~~v~keG~L~rK~~~~~-g--k----------k~~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L 72 (124)
T 3pp2_A 6 KTLDKAGVLHRTKTADK-G--K----------RLRKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVEL 72 (124)
T ss_dssp ---CEEEEEEEEEEEET-T--E----------ECSSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEEC
T ss_pred CcEEEEEEEEEEEeccC-C--c----------cCCCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEc
Confidence 34569999988753110 1 0 012257999999999999999987655421 12233442
Q ss_pred CCCCCCCCCCccccchhhcccCCcceeEEEEeC-ceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 279 LPASDGNGEGRVSLATEVKERNPLRHAFKVTCG-VRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
. +..+..+. ++.+..+|-|.|... ++...|.+.|...+.+|+.+|..+.
T Consensus 73 ~-------~a~v~~~~--~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~aI 122 (124)
T 3pp2_A 73 R-------GATLSWAP--KDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQGI 122 (124)
T ss_dssp T-------TCEEEECC--GGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEecc--cccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 1 12233221 123345688999864 5789999999999999999999864
No 97
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.15 E-value=0.00081 Score=64.76 Aligned_cols=86 Identities=12% Similarity=0.259 Sum_probs=58.6
Q ss_pred CCceEEEEEcCCeEEEeeCCCC---CCccEEEEEcCCCCCC-CCCCCccccchhhcccCCcceeEEEEeC------ceEE
Q 001322 246 NWQKVWAVLKPGFLALLADPFD---TKPMDIIVFDVLPASD-GNGEGRVSLATEVKERNPLRHAFKVTCG------VRSI 315 (1100)
Q Consensus 246 ~w~krW~vvk~s~l~~~~~~~~---~~~~~v~lfD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~r~l 315 (1100)
.|.+|||||+++-|.|.++..+ .++..+|-+|..+... ......+.. .+....+-|+|... .+.+
T Consensus 19 ~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~-----~~~~~p~iF~I~~~~~~~~~~~~l 93 (117)
T 2rov_A 19 GWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRA-----DAKEIPRIFQILYANEGISSAKNL 93 (117)
T ss_dssp CCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSS-----CTTTGGGEEEEEECSSSSTTCEEE
T ss_pred CcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEccccccccc-----ccccCCcEEEEEeCCCCCCCCcEE
Confidence 6999999999999999986532 2667766555433211 000011111 12234567999753 5899
Q ss_pred EEEeCchhhHHHHHHHHHhcc
Q 001322 316 RLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 316 ~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.|.+.|.....+|+.+|....
T Consensus 94 ~l~A~s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 94 LLLANSTEEQQKWVSRLVKKI 114 (117)
T ss_dssp EEECSSHHHHHHHHHHHHHHC
T ss_pred EEEeCCHHHHHHHHHHHHHHh
Confidence 999999999999999998865
No 98
>4f7h_A Fermitin family homolog 2; beta-barrel, membrane binding, integrin activation, cytoplas membrane, cell adhesion; HET: SRT; 1.90A {Homo sapiens} PDB: 2lko_A*
Probab=96.99 E-value=0.0036 Score=63.38 Aligned_cols=80 Identities=16% Similarity=0.287 Sum_probs=60.8
Q ss_pred CCCceEEEEEcCCeEEEeeCCCC--CCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEe----CceEEEEE
Q 001322 245 DNWQKVWAVLKPGFLALLADPFD--TKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTC----GVRSIRLR 318 (1100)
Q Consensus 245 ~~w~krW~vvk~s~l~~~~~~~~--~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----~~r~l~l~ 318 (1100)
..|+++|||+||..|.|++.+++ +.+..+|-+- +.+|..... -...+|+|++.. |.+.+-|+
T Consensus 64 KgyKryWFv~kd~~LsyYKskEe~~geP~~~I~Lr---------GCEVtpDVn---va~~Kf~IkL~vP~~~gm~e~~Lr 131 (173)
T 4f7h_A 64 KGYKQYWCTFKDTSISCYKSKEESSGTPAHQMNLR---------GCEVTPDVN---ISGQKFNIKLLIPVAEGMNEIWLR 131 (173)
T ss_dssp CCCEEEEEEEETTEEEEESCGGGCSSCCSEEEECT---------TCEEEEEEE---TTTTEEEEEEEEEETTEEEEEEEE
T ss_pred ccceeEEEEEeCCEEEEEcCHhHhcCCCceEEecC---------ceEEecccc---ccccceeEEEeccCCCCcceeeee
Confidence 57899999999999999998877 6787777553 133321111 123467888776 67889999
Q ss_pred eCchhhHHHHHHHHHhcc
Q 001322 319 TRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 319 ~~~~~~~~~w~~~i~~~~ 336 (1100)
|.++.++.+|+++..-+.
T Consensus 132 cd~E~qya~WMAAcrLAs 149 (173)
T 4f7h_A 132 CDNEKQYAHWMAACRLAS 149 (173)
T ss_dssp ESSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhhhhc
Confidence 999999999999988765
No 99
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=96.72 E-value=0.0033 Score=63.00 Aligned_cols=87 Identities=17% Similarity=0.091 Sum_probs=67.1
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCcc
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRV 290 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~ 290 (1100)
-.|+|||.||++ ..|++||||+++.-.+|+-+|........|..|.. ..+
T Consensus 52 Ilk~G~v~KrkG----------------------l~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~--------l~v 101 (151)
T 1w1g_A 52 ILKMGPVDKRKG----------------------LFARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQE--------LRP 101 (151)
T ss_dssp EEEEEEEEEEET----------------------TEEEEEEEEEETTTEEEEEETTTTEEEEEECCCTT--------CEE
T ss_pred EEEEEEEEeccc----------------------CcceeEEEEEcCCceEEEEcCccccccceEecCCC--------eeE
Confidence 379999999852 12889999999887766667999989998888852 122
Q ss_pred ccchhhcccCCcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 291 SLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 291 ~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+ .+ ...|.|...+|+..|.+. ...+.+|..+|+++.
T Consensus 102 e~-------k~-~~~F~I~Tp~RtY~~~d~-~~~AqeWv~aI~~~~ 138 (151)
T 1w1g_A 102 EA-------KN-FKTFFVHTPNRTYYLMDP-SGNAHKWCRKIQEVW 138 (151)
T ss_dssp EE-------SS-SSEEEEEETTEEEEEECT-TSCHHHHHHHHHHHH
T ss_pred EE-------cC-CCEEEEECCCceEEEEcC-ccCHHHHHHHHHHHH
Confidence 11 11 237999999999999987 889999999999864
No 100
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=96.66 E-value=0.0049 Score=67.99 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=61.6
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEE-EEcCCCCCCCCCCC
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDII-VFDVLPASDGNGEG 288 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~-lfD~~~~~~~~~~~ 288 (1100)
+..++|+|.++..+ ...|+||||++|+|.|.|+++..+..+++.+ |.+-. +.
T Consensus 157 ~pe~~G~L~~k~~~--------------------~k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~-------~~ 209 (281)
T 4gmv_A 157 VPEIEGVLWLKDDG--------------------KKSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLD-------HV 209 (281)
T ss_dssp CCCCEEEEEEECTT--------------------SSCEEEEEEEECSSCEEEC---------CCEEEECGG-------GC
T ss_pred CCccEEEEEEECCC--------------------CCCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcC-------Cc
Confidence 44699999887311 1479999999999999999765444455543 22311 13
Q ss_pred ccccchhh--cccCCcceeEEEEeCc------eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 289 RVSLATEV--KERNPLRHAFKVTCGV------RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 289 ~~~~~~~~--~~~~~~~~~~~i~~~~------r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+|..+... +-..|..+||.|.... +.-.|-|.+......|+.+|.-+.
T Consensus 210 ~VY~~~~~kkk~kaPt~~~F~ik~~~~~~~~~~~~~~caede~~~~~Wv~Air~ak 265 (281)
T 4gmv_A 210 NVYYGQDYRNKYKAPTDYCLVLKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAK 265 (281)
T ss_dssp EEEEESSHHHHTCCSCSCEEEEECTTCCSCCTTCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEecccccccCCCCCcEEEEecCccCCCCCceEEEEeCCHHHHHHHHHHHHHHh
Confidence 44443211 2245788999998632 345666777888899999998763
No 101
>4bbk_A Kindlin-1, fermitin family homolog 1; PH domain, cell adhesion; 2.10A {Mus musculus}
Probab=96.65 E-value=0.0049 Score=61.84 Aligned_cols=80 Identities=15% Similarity=0.215 Sum_probs=58.9
Q ss_pred CCCceEEEEEcCCeEEEeeCCCC--CCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeC----ceEEEEE
Q 001322 245 DNWQKVWAVLKPGFLALLADPFD--TKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCG----VRSIRLR 318 (1100)
Q Consensus 245 ~~w~krW~vvk~s~l~~~~~~~~--~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~----~r~l~l~ 318 (1100)
..|+++|||+||..|.|++.+++ +.+...|-+-. .+|.-.- .-...+|+|++... ...+-|+
T Consensus 43 KgfKryWfv~kDt~LsyYKSkEe~~geP~~~inLrG---------CEVtPDV---nva~~Kf~ikL~ip~~~gm~e~~Lr 110 (165)
T 4bbk_A 43 KACKQYWFVFKDTSIAYFKNKELEQGEPIEKLNLRG---------CEIVPDV---NVSGRKFGIKLLIPVADGMNEVYLR 110 (165)
T ss_dssp -CCEEEEEEEETTEEEEESSGGGTTSCCSEEEECTT---------CEEEEEE---ETTTTEEEEEEEEEETTEEEEEEEE
T ss_pred ccceeEEEEEeCCEEEEEcCHHHhcCCCceEEecCc---------cEEeccc---ccccceeeEEEecCCCCcceeeeee
Confidence 57889999999999999998876 66777775531 2332100 01234688888655 5689999
Q ss_pred eCchhhHHHHHHHHHhcc
Q 001322 319 TRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 319 ~~~~~~~~~w~~~i~~~~ 336 (1100)
|.++.++.+|+++..-+.
T Consensus 111 cdsE~QYa~WMAAcrLAs 128 (165)
T 4bbk_A 111 CDHEDQYARWMAACILAS 128 (165)
T ss_dssp ESSHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHhhhcc
Confidence 999999999999998765
No 102
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=96.59 E-value=0.0079 Score=60.32 Aligned_cols=38 Identities=18% Similarity=0.419 Sum_probs=33.0
Q ss_pred cCCcceeEEEEeC---ceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 299 RNPLRHAFKVTCG---VRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 299 ~~~~~~~~~i~~~---~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
+++..+-|+|... .+.+.|-+.|...+.+|+.+|.+++
T Consensus 107 ~~~~~~vF~I~~~~~~~~~~~laAds~Eem~dW~kaIreaa 147 (150)
T 2fjl_A 107 KNNRLFVFSISMPSVAQWSLDVAADSQEELQDWVKKIREVA 147 (150)
T ss_dssp SSSCSCEEEEECTTTSSCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEeCCCCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 3456799999877 4589999999999999999999986
No 103
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=96.37 E-value=0.0037 Score=72.44 Aligned_cols=97 Identities=15% Similarity=0.290 Sum_probs=58.8
Q ss_pred CcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEc-CCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCc
Q 001322 211 KLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLK-PGFLALLADPFDTKPMDIIVFDVLPASDGNGEGR 289 (1100)
Q Consensus 211 kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk-~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~ 289 (1100)
--|||||.|+.. . ...|++||||++ |+-|.|.++.....+..++-+.... . ..
T Consensus 6 v~keG~L~K~g~----------------~----~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~-~-----~~ 59 (446)
T 4ejn_A 6 IVKEGWLHKRGE----------------Y----IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFS-V-----AQ 59 (446)
T ss_dssp EEEEEEEEEEET----------------T----TTEEEEEEEEEETTSBEEEESSCC-------CCCGGGB-C-----TT
T ss_pred EEEEeeEEeecc----------------c----cccccceEEEEeeCCEEEEEecCCCCCccCcccccCcc-c-----cc
Confidence 359999998831 1 147999999998 8999999887666666655443210 0 00
Q ss_pred cccchhhcccCCcceeEEEEeCceEE----EEEeCchhhHHHHHHHHHhcc
Q 001322 290 VSLATEVKERNPLRHAFKVTCGVRSI----RLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~i~~~~r~l----~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+ .....+..+.|.|...+.+. .+.+.+.....+|..+|..+.
T Consensus 60 ~~~---~~~~~~~~~~f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~i 107 (446)
T 4ejn_A 60 CQL---MKTERPRPNTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVA 107 (446)
T ss_dssp CEE---EEECSSSTTEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHC
T ss_pred eee---cCCCCCCCceeEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhhh
Confidence 010 01122335678886554322 567788889999999999876
No 104
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=96.19 E-value=0.0057 Score=69.35 Aligned_cols=109 Identities=8% Similarity=0.123 Sum_probs=71.6
Q ss_pred cHHHHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecCCCCCCCCCCCCCc
Q 001322 761 LEESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPLLPGFQGGVDDGGA 840 (1100)
Q Consensus 761 ~E~sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~~P~F~G~~~~~~~ 840 (1100)
....|.+...++|++|++.|||...+ ....++...+.+|.+ +|++|++++|..|+- .
T Consensus 116 G~~~I~~ri~eli~~A~~eI~i~~~~-------------~~l~~l~~~L~~a~~--RGV~Vrvi~~~~~d~----a---- 172 (342)
T 3qph_A 116 SFDEAIEMFRESLYSAKNEVIVVTPS-------------EFFETIREDLIKTLE--RGVTVSLYIDKIPDL----S---- 172 (342)
T ss_dssp SHHHHHHHHHHHHHHCSSEEEEEECH-------------HHHHHHHHHHHHHHH--TTCEEEEEESSCCCC----G----
T ss_pred CHHHHHHHHHHHHHhhheEEEEEeCH-------------HHHHHHHHHHHHHHh--CCCEEEEEECCCCCh----h----
Confidence 35689999999999999999997532 123444444444544 499999999865430 0
Q ss_pred hhHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCccccc-ccccccccccccCCCCccccceeeeeeEEEEeCcEEEEcccc
Q 001322 841 ASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYI-SFYGLRAYGRLFEDGPVATSQVYVHSKVMIIDDSIALIGSAN 919 (1100)
Q Consensus 841 ~s~r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi-~f~~Lr~~~~~~~~g~~vte~iyvHSKlmIVDD~~~iIGSAN 919 (1100)
. ..|. .....|.+. ..+ -++|+|++.+++|++|
T Consensus 173 -~-------------------------------~~~~~~~~~vR~~~----~~p----------~l~ivD~~~alv~~~~ 206 (342)
T 3qph_A 173 -E-------------------------------FKGKGNFFVRQFYK----LNH----------LIGMTDGKEVVTIQNA 206 (342)
T ss_dssp -G-------------------------------GSSSSEEEEEECSC----CCS----------EEEEETTTEEEEECSS
T ss_pred -h-------------------------------hhccccceEEEEcC----CCc----------EEEEEECCEEEEeccc
Confidence 0 0010 001123221 111 2599999999999999
Q ss_pred c-Cc---CccCCCCCcceeEEEEcCc
Q 001322 920 I-ND---RSLLGSRDSEIGVLIEDKE 941 (1100)
Q Consensus 920 i-N~---RSm~G~~DsEi~v~I~d~~ 941 (1100)
. ++ ||+ ..+.| +++|.|++
T Consensus 207 ~~~~~~~rS~--~~~~e-aliv~~~~ 229 (342)
T 3qph_A 207 TFDSIGPPSF--KSTYP-EIIFSQYS 229 (342)
T ss_dssp SCCSSCCCEE--EECCH-HHHHHHHH
T ss_pred cccccccccc--ccccc-EEEEECHH
Confidence 8 44 999 47888 88888765
No 105
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=95.75 E-value=0.039 Score=62.50 Aligned_cols=95 Identities=16% Similarity=0.106 Sum_probs=62.9
Q ss_pred EEecH-HHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEechhhhHhhcchh
Q 001322 367 WFVDG-KAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKEVALALKINSV 445 (1100)
Q Consensus 367 ~lvdG-~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rGVkVrILl~d~~~~~l~~~s~ 445 (1100)
|.+.| +.....+.+.|.+|+++|++..| | ..-..+...|.++++|||+|++++.+.... ..
T Consensus 112 ~~i~G~~~I~~ri~eli~~A~~eI~i~~~---~----------~~l~~l~~~L~~a~~RGV~Vrvi~~~~~d~-----a~ 173 (342)
T 3qph_A 112 WRSRSFDEAIEMFRESLYSAKNEVIVVTP---S----------EFFETIREDLIKTLERGVTVSLYIDKIPDL-----SE 173 (342)
T ss_dssp EEESSHHHHHHHHHHHHHHCSSEEEEEEC---H----------HHHHHHHHHHHHHHHTTCEEEEEESSCCCC-----GG
T ss_pred EEEcCHHHHHHHHHHHHHhhheEEEEEeC---H----------HHHHHHHHHHHHHHhCCCEEEEEECCCCCh-----hh
Confidence 44444 56789999999999999999764 1 124578889999999999999997443211 01
Q ss_pred hhHHHhhccCCCeEEEEcCCCcccCcccccCcceEEEEeCcEEEEccccC
Q 001322 446 YSKRKLLSIHENVRVLRYPDHFASGVYLWSHHEKLVIVDYQICFIGGLDL 495 (1100)
Q Consensus 446 ~~k~~L~~l~~nI~V~r~p~~~~~~~~~~~hHqKivVID~~vAfvGGiNL 495 (1100)
+ .....+..+..++ . ..-++|+|++.|++|+-|.
T Consensus 174 ~-----~~~~~~~~vR~~~-~----------~p~l~ivD~~~alv~~~~~ 207 (342)
T 3qph_A 174 F-----KGKGNFFVRQFYK-L----------NHLIGMTDGKEVVTIQNAT 207 (342)
T ss_dssp G-----SSSSEEEEEECSC-C----------CSEEEEETTTEEEEECSSS
T ss_pred h-----hccccceEEEEcC-C----------CcEEEEEECCEEEEecccc
Confidence 1 1111112222223 1 1226999999999998776
No 106
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=94.35 E-value=0.032 Score=61.45 Aligned_cols=116 Identities=16% Similarity=0.156 Sum_probs=64.1
Q ss_pred CCCCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCC
Q 001322 207 EYGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNG 286 (1100)
Q Consensus 207 ~~g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~ 286 (1100)
..|.-.|||||..++.... |.+... . ......|+++|+||+++.|.|.++...... +. -..+...+...+
T Consensus 7 ~~~~v~k~G~L~rK~~l~~-~k~~K~--~-----~~~~r~Wkk~w~VLkg~~L~fYKde~~~~~-~~-~~~p~~~I~L~g 76 (279)
T 3a8n_A 7 AQGTVRKAGALAVKNFLVH-KKNKKV--E-----SATRRKWKHYWVSLKGCTLFFYETDGRSGI-DH-NSVPKHAVWVEN 76 (279)
T ss_dssp ---CCSCEEEEEEEEEEEE-ETTTEE--E-----CCCCCCCEEEEEEEETTEECCBCCC----------CCCSSCCBCCS
T ss_pred cCCceeEEEEEEEEEEecc-cCCccc--C-----CccCCCCeEEEEEEeCCEEEEEeccccccc-cc-ccCCCceEeccC
Confidence 3466789999987754211 000000 0 012257999999999999999986543211 11 000110011110
Q ss_pred CCccccchhhcccCCcceeEEEEe-CceEEEEEeCchhhHHHHHHHHHhcc
Q 001322 287 EGRVSLATEVKERNPLRHAFKVTC-GVRSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~i~~-~~r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
..+..+. +.+..++-|+|.+ ..+.+.+.+.+...+..|+.+|..+.
T Consensus 77 -a~v~~a~---d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~ 123 (279)
T 3a8n_A 77 -SIVQAVP---EHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSAC 123 (279)
T ss_dssp -CEECCCT---TSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHH
T ss_pred -cEEEecc---ccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHH
Confidence 1111111 2233457788875 46778999999999999999999865
No 107
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.19 E-value=0.29 Score=47.59 Aligned_cols=101 Identities=18% Similarity=0.211 Sum_probs=61.2
Q ss_pred CCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCC--C
Q 001322 210 PKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNG--E 287 (1100)
Q Consensus 210 ~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~--~ 287 (1100)
.-.|+|+|.+.+-.+ |. .+|+|+|+||... . ...+.-+=+||..-+..... .
T Consensus 11 ~~vk~G~L~~q~q~~---------------fg---kKWrk~w~vLy~~------S--~~GvaRLE~yd~~ek~~r~~~~r 64 (127)
T 2d9w_A 11 GAVKQGFLYLQQQQT---------------FG---KKWRRFGASLYGG------S--DCALARLELQEGPEKPRRCEAAR 64 (127)
T ss_dssp CSSEEEEEEECBCSS---------------SS---CBCCEEEEEEECC------S--SSSCCEEEEECCCSCSSSCSCCE
T ss_pred ccccceEEEecccch---------------hh---hhhheeEEEEecC------C--CCCceeeeeeeccCccccCCCCc
Confidence 467999999875211 11 3699999986543 2 22344555666532221110 0
Q ss_pred ------Cccccchhhcc-cC-CcceeEEEEeCceEEEEEeCchhhHHHHHHHHHhccC
Q 001322 288 ------GRVSLATEVKE-RN-PLRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDAGL 337 (1100)
Q Consensus 288 ------~~~~~~~~~~~-~~-~~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~~~ 337 (1100)
.-+++..-..+ .- ...+.|.|.+.+|...|-+.+. +..+|+.+|-+...
T Consensus 65 rVIrLsdCisV~~~~~e~~~pk~~~aF~l~T~er~~~laAe~~-E~~~Wi~~ic~~aF 121 (127)
T 2d9w_A 65 KVIRLSDCLRVAEAGGEASSPRDTSAFFLETKERLYLLAAPAA-ERGDWVQAICLLAF 121 (127)
T ss_dssp EEECGGGEEEEEECCSCSSSCSSCEEEEEEESSCEEEEEECHH-HHHHHHHHHHHHHT
T ss_pred eEEEhhhCCeEecccCccCCCCcceEEEEEeCCcEEEEEeCcH-HHHHHHHHHHHHhc
Confidence 11222211111 00 1348899999999999999975 89999999988763
No 108
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=93.73 E-value=0.15 Score=54.78 Aligned_cols=56 Identities=20% Similarity=0.259 Sum_probs=46.0
Q ss_pred EEecH-HHHHHHHHHHHHhcccEEEEeeecCCceeEEEcCCCCchhHHHHHHHHHHhhCCcEEEEEEech
Q 001322 367 WFVDG-KAAFEAIASSIEDAKSEIFICGWWLCPELYLRRPFHNHASSRLDALLEAKAKQGVQIYILLYKE 435 (1100)
Q Consensus 367 ~lvdG-~~~f~al~~aI~~Ak~sI~I~~WwlsPe~yL~rp~~~~~~~rL~~lL~~aA~rGVkVrILl~d~ 435 (1100)
|.+.| +.....+.+.|++|+++|+|.-| ...-.+|.+.|.+|++|||.|+|+++..
T Consensus 3 W~ik~~e~Ii~r~~e~I~~A~~el~lsi~-------------~e~l~~l~~~L~~A~~rGV~V~liv~~~ 59 (233)
T 2f5t_X 3 WRSRSFDEAIEMFRESLYSAKNEVIVVTP-------------SEFFETIREDLIKTLERGVTVSLYIDKI 59 (233)
T ss_dssp EEESCHHHHHHHHHHHHHTCSSEEEEEEC-------------GGGHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEECCHHHHHHHHHHHHHHhhhEEEEEeC-------------HHHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 44444 46789999999999999999654 3345789999999999999999999764
No 109
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=91.42 E-value=0.25 Score=52.43 Aligned_cols=37 Identities=16% Similarity=0.415 Sum_probs=27.9
Q ss_pred CCCCcceeeEEeeeCCCccCCCCCCCccccCCCccccCCCceEEEEEcCCeEEEeeC
Q 001322 208 YGPKLKEDYVMAKHLPKISRNDDSRKCCCCPLFTCCNDNWQKVWAVLKPGFLALLAD 264 (1100)
Q Consensus 208 ~g~kgkeg~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~w~krW~vvk~s~l~~~~~ 264 (1100)
-|.-.+||||.|+. | .. ..|+|||||+|++.++|+..
T Consensus 18 ~~~~~~~g~l~~~~-----~--------------~~-~~w~~rw~vl~~~~~~~~~~ 54 (228)
T 3tfm_A 18 PGSPYFHSFLYMNG-----G--------------LM-NSWKRRWCVLKDETFLWFRS 54 (228)
T ss_dssp ---CCEEEEEEECC-----T--------------TT-CCCEEEEEEEETTEEEEESS
T ss_pred CCCCceEEEEeecC-----c--------------cc-ccceEEEEEEeCCEEEEecc
Confidence 35678999999882 1 11 56999999999999999974
No 110
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=84.60 E-value=1.9 Score=46.33 Aligned_cols=80 Identities=18% Similarity=0.257 Sum_probs=56.9
Q ss_pred CCeEEEEEecCCCCCCCCCCCCCchhHHHHHHHHHHHHhhhhHHHHHHHHHhcCCCcccccccccccccccccCCCCccc
Q 001322 817 KCFRVIIVIPLLPGFQGGVDDGGAASVRAIMHWQYRTICRGQNSILHNLYALLGPKTHDYISFYGLRAYGRLFEDGPVAT 896 (1100)
Q Consensus 817 ~gv~V~VVlP~~P~F~G~~~~~~~~s~r~im~~qyrtI~rG~~si~~~L~~~~G~~~~~Yi~f~~Lr~~~~~~~~g~~vt 896 (1100)
+|++|.+|+-. .... ...|-+ ..++|.. .|++++-+ +
T Consensus 63 ~Ggkv~~IlGg------stsQ-rlTSKQ----------------avEElL~-cGvev~Ii----N--------------- 99 (358)
T 2c1l_A 63 QGGRVIAILGG------STSQ-RLSSRQ----------------VVEELLN-RGVEVHII----N--------------- 99 (358)
T ss_dssp TTCEEEEEEEC------CSSS-CCBBHH----------------HHHHHHH-TTCEEEEE----E---------------
T ss_pred cCCcEEEEEcc------cccc-cccHHH----------------HHHHHHh-cCCceEEe----e---------------
Confidence 48899999863 2322 223332 3567777 58877533 1
Q ss_pred cceeeeeeEEEE---eCcEEEEcccccCcCccCCCCCcceeEEEEcCc
Q 001322 897 SQVYVHSKVMII---DDSIALIGSANINDRSLLGSRDSEIGVLIEDKE 941 (1100)
Q Consensus 897 e~iyvHSKlmIV---DD~~~iIGSANiN~RSm~G~~DsEi~v~I~d~~ 941 (1100)
..-.+|+|+-.. |...+||||+|+..--| ..|-|++|.+++..
T Consensus 100 rkRi~HaK~Yg~~~n~g~~LIV~SgNfT~pGm--sQNvE~sllld~~T 145 (358)
T 2c1l_A 100 RKRILHAKLYGTSNNLGESLVVSSGNFTGPGM--SQNIEASLLLDNNT 145 (358)
T ss_dssp CSSCBCCEEEEEEETTEEEEEEESCCBSTTTT--TTSBEEEEEECHHH
T ss_pred eeeecchhhhcccCCCceEEEEecCCcccccc--ccceeEEEEEcCCC
Confidence 112789998775 56789999999999999 69999999998754
No 111
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=78.37 E-value=13 Score=36.43 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=47.2
Q ss_pred CCCceEEEEEcCC-----eE-EEeeCCCCCCccE-EEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCce-EEE
Q 001322 245 DNWQKVWAVLKPG-----FL-ALLADPFDTKPMD-IIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVR-SIR 316 (1100)
Q Consensus 245 ~~w~krW~vvk~s-----~l-~~~~~~~~~~~~~-v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r-~l~ 316 (1100)
.+|+|.||+++.. |+ =|+..|.+.++.- |++++- ++..-.... |.....|.|.|...++ ..+
T Consensus 40 ~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I---~EVR~tt~L-------EmPD~~nTFVlK~~n~~eyi 109 (136)
T 1v5m_A 40 AQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAI---IEVRTTMPL-------EMPEKDNTFVLKVENGAEYI 109 (136)
T ss_dssp CCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTC---CBCCCCCCS-------SSCCCTTEECCBCTTSCBEE
T ss_pred cchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhh---hhhhhcccc-------ccCCccceEEEEecCCcEEE
Confidence 5899999999885 33 3444444444332 222210 000000011 1112356777765545 789
Q ss_pred EEeCchhhHHHHHHHHHhc
Q 001322 317 LRTRTGAKVRDWVAAINDA 335 (1100)
Q Consensus 317 l~~~~~~~~~~w~~~i~~~ 335 (1100)
|.+.+..++..|.+.|+.-
T Consensus 110 ~ea~d~~q~~sWla~Ir~C 128 (136)
T 1v5m_A 110 LETIDSLQKHSWVADIQGC 128 (136)
T ss_dssp EECSSHHHHHHHHHHHHHH
T ss_pred EEcCCHHHHHHHHHHHHhh
Confidence 9999999999999999764
No 112
>1zc3_B Exocyst complex protein EXO84; exocytosis, small GTPase, GTP-binding protein,, signaling protein; HET: GNP; 2.00A {Rattus norvegicus} SCOP: b.55.1.1 PDB: 1zc4_B*
Probab=63.69 E-value=59 Score=30.55 Aligned_cols=78 Identities=15% Similarity=0.231 Sum_probs=52.2
Q ss_pred eEEEEEcCCeEEEeeCC-C-CCCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCceEEEEEeCchhhHH
Q 001322 249 KVWAVLKPGFLALLADP-F-DTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGAKVR 326 (1100)
Q Consensus 249 krW~vvk~s~l~~~~~~-~-~~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~~~~ 326 (1100)
+++|.+=+..|+|.... . .++...+-.++-. ++.+-+ +++....++.|+|..+.++..+.|.+...-.
T Consensus 27 ~v~~FLfND~Ll~a~~~~~~~~~~~~~~~~~L~---------~~~v~d-~~d~~~~~n~f~i~~~~~s~~~~aes~~eK~ 96 (113)
T 1zc3_B 27 RVHGFLMNDCLLVATWLPQRRGMYRYNALYPLD---------RLAVVN-VKDNPPMKDMFKLLMFPESRIFQAENAKIKR 96 (113)
T ss_dssp EEEEEEESSEEEEEEEECCTTSCEEEEEEEETT---------TCEEEE-ECCBTTBSSEEEEEETTEEEEEECSSHHHHH
T ss_pred cEEEEecCCEEEEEEEeccCcccEEEEEEEEcc---------cCEEEE-CCCCcccceEEEEEeCCceEEEEcCCHHHHH
Confidence 57888888889988631 1 1222333333321 122211 1233357899999999999999999999999
Q ss_pred HHHHHHHhcc
Q 001322 327 DWVAAINDAG 336 (1100)
Q Consensus 327 ~w~~~i~~~~ 336 (1100)
+|..+|+++.
T Consensus 97 ~Wl~~~~~a~ 106 (113)
T 1zc3_B 97 EWLEVLEETK 106 (113)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999998753
No 113
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=60.05 E-value=29 Score=39.66 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=52.2
Q ss_pred CCceEEEEEcCCeEEEeeCCCCCC--ccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCceEEEEEeCchh
Q 001322 246 NWQKVWAVLKPGFLALLADPFDTK--PMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGVRSIRLRTRTGA 323 (1100)
Q Consensus 246 ~w~krW~vvk~s~l~~~~~~~~~~--~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~r~l~l~~~~~~ 323 (1100)
+++.+|+++=+.+|+|.+...+++ ....|-++. +.+... ......++|.|.+..+.+.|.+.|..
T Consensus 257 ~~~~r~~fLF~d~Ll~~k~~~~~~y~~k~~i~L~~-----------l~v~~~--~~~~~~~~f~i~~~~~~~~l~a~s~~ 323 (434)
T 3mpx_A 257 NRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVAN-----------MKVSRP--VMEKVPYALKIETSESCLMLSASSCA 323 (434)
T ss_dssp EEEEEEEEEESSEEEEEEECTTSCEEEEEEEEC----------------CCC--CCTTSCSEEEEECSSCEEEEECSSHH
T ss_pred CceEEEEEEECCEEEEEEecCCCeEEEEEEEEcCC-----------cEEEec--CCCCCCeeEEEecCCeEEEEecCCHH
Confidence 356799999999999997433332 112221111 111110 11235789999999999999999999
Q ss_pred hHHHHHHHHHhcc
Q 001322 324 KVRDWVAAINDAG 336 (1100)
Q Consensus 324 ~~~~w~~~i~~~~ 336 (1100)
.-..|+..|.++.
T Consensus 324 ek~~W~~~i~~ai 336 (434)
T 3mpx_A 324 ERDEWYGCLSRAL 336 (434)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999976
No 114
>1v61_A RAC/CDC42 guanine nucleotide exchange factor (GEF) 6; pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=59.01 E-value=26 Score=34.14 Aligned_cols=81 Identities=11% Similarity=0.153 Sum_probs=52.3
Q ss_pred ceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCc-eEEEEEeCchhhHH
Q 001322 248 QKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGV-RSIRLRTRTGAKVR 326 (1100)
Q Consensus 248 ~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-r~l~l~~~~~~~~~ 326 (1100)
+.|.|++=++.|+|++ +....-.+++ -....+. .+.+-+ ..+..+.+|.|.|.-.. +++.+.|.|.....
T Consensus 45 ~eR~l~LF~~~Ll~~s-~~~~~~~f~~--kgklPL~-----g~~V~~-~ed~~~~~~aFeI~g~~~~~i~v~~~s~eE~~ 115 (132)
T 1v61_A 45 EERYFLLFSSVLIMLS-ASPRMSGFMY--QGKIPIA-----GMVVNR-LDEIEGSDCMFEITGSTVERIVVHCNNNQDFQ 115 (132)
T ss_dssp CEEEEEECSSCEEEEE-CSSSSSCCEE--EEEECTT-----TCBCST-TCSSSSSCCCEEEECSSSCEEEECCCCSHHHH
T ss_pred eEEEEEEcCCeEEEEE-ecCCCceEEE--EEEEecc-----eeEEEe-ccccccCccEEEEecCCCceEEEEeCCHHHHH
Confidence 5799999999999997 4322111111 1000000 111111 11223578999999766 89999999999999
Q ss_pred HHHHHHHhccC
Q 001322 327 DWVAAINDAGL 337 (1100)
Q Consensus 327 ~w~~~i~~~~~ 337 (1100)
+|+.+|..+..
T Consensus 116 ~Wl~~L~~~i~ 126 (132)
T 1v61_A 116 EWMEQLNRLTK 126 (132)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998763
No 115
>3ml4_A Protein DOK-7; tyrosine phosphorylation, adapter protein, dimerization, SIG protein; HET: PTR; 2.60A {Mus musculus}
Probab=58.67 E-value=22 Score=37.63 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=30.3
Q ss_pred cceeEEEEeCceEEEEEeCchhhHHHHHHHHHhc
Q 001322 302 LRHAFKVTCGVRSIRLRTRTGAKVRDWVAAINDA 335 (1100)
Q Consensus 302 ~~~~~~i~~~~r~l~l~~~~~~~~~~w~~~i~~~ 335 (1100)
..+.+.|-+....+.|-|.+...+.+|-..|...
T Consensus 78 ~s~TlAIIc~d~~~vLAFds~e~l~~W~~~l~~s 111 (224)
T 3ml4_A 78 LAHTLAIICLSQAVMLGFDSHEAMCAWDTRIRYA 111 (224)
T ss_dssp EEEEEEEEESSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred cccEEEEEecCcEEEEEeCCHHHHHHHHHHHhhc
Confidence 3678899999999999999999999999999864
No 116
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=52.99 E-value=23 Score=37.71 Aligned_cols=51 Identities=8% Similarity=0.145 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHhcccEEEEEeeecccCCCCChHHHHHHHHHHHHHHHHHHHcCCCeEEEEEecC
Q 001322 762 EESIHCAYCSLIEKAEHFIYIENQFFISGLSGDEIIRNRVLESLYRRILRAYNEKKCFRVIIVIPL 827 (1100)
Q Consensus 762 E~sI~~ayl~aI~~A~hfIYIEnQyFis~~~~~~~v~N~I~~AL~~ri~rA~~~~~gv~V~VVlP~ 827 (1100)
...|.+-..++|++|++.|++. ++. .....|...+.+|.+ +|+.|+|++..
T Consensus 8 ~e~Ii~r~~e~I~~A~~el~ls----i~~---------e~l~~l~~~L~~A~~--rGV~V~liv~~ 58 (233)
T 2f5t_X 8 FDEAIEMFRESLYSAKNEVIVV----TPS---------EFFETIREDLIKTLE--RGVTVSLYIDK 58 (233)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEE----ECG---------GGHHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred HHHHHHHHHHHHHHhhhEEEEE----eCH---------HHHHHHHHHHHHHHH--CCCEEEEEEcC
Confidence 4578888999999999999994 333 233445555555544 49999999874
No 117
>1q32_A TDP1P;, tyrosyl-DNA phosphodiesterase; DNA repair, replication, transcription, hydrolase, replication,transcription, hydrolase; 2.03A {Saccharomyces cerevisiae} SCOP: d.136.1.3 d.136.1.3
Probab=29.73 E-value=27 Score=41.82 Aligned_cols=39 Identities=21% Similarity=0.226 Sum_probs=28.0
Q ss_pred CCCeEEEEcCCCcccCcccccCcceEEEE---eC-cEEEEccccCCCC
Q 001322 455 HENVRVLRYPDHFASGVYLWSHHEKLVIV---DY-QICFIGGLDLCFG 498 (1100)
Q Consensus 455 ~~nI~V~r~p~~~~~~~~~~~hHqKivVI---D~-~vAfvGGiNL~~G 498 (1100)
.+||.+..-|- + . +.+||-||+|. |+ -...|-..||...
T Consensus 165 ~~nv~l~~p~m--p--~-fGthHSKmmlL~y~dg~lRVVI~TANLi~~ 207 (544)
T 1q32_A 165 LKKVKLIEITM--P--P-FASHHTKLIINFYDNGECKIFLPSNNFTSM 207 (544)
T ss_dssp HTTEEEEEECC--C--T-TCCBCCCEEEEEESTTEEEEEEESSCBSHH
T ss_pred CCCeEEEeCCC--C--C-CCCCCceeEEEEecCCCEEEEEeCCCCChH
Confidence 47998764332 1 2 57999999998 66 6678889999633
No 118
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=28.35 E-value=1.5e+02 Score=28.15 Aligned_cols=35 Identities=14% Similarity=0.287 Sum_probs=30.4
Q ss_pred cceeEEEEeCc--eEEEEEeCchhhHHHHHHHHHhcc
Q 001322 302 LRHAFKVTCGV--RSIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 302 ~~~~~~i~~~~--r~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
....|.|..++ ++|-|.|.|...+..|+..|+...
T Consensus 84 ~~~~FsIiy~~~~k~LdlvA~s~~e~~~Wv~gL~~L~ 120 (131)
T 1mai_A 84 EDRCFSIVFKDQRNTLDLIAPSPADAQHWVQGLRKII 120 (131)
T ss_dssp GGGEEEEEESSSCCCEEEECSSHHHHHHHHHHHHHHH
T ss_pred ccceEEEEECCCCceEEEEeCCHHHHHHHHHHHHHHH
Confidence 45789888887 599999999999999999998765
No 119
>3qwm_A Iqsec1, IQ motif and SEC7 domain-containing protein 1; structural genomics, structural genomics consortium, SGC; 2.39A {Homo sapiens}
Probab=25.21 E-value=3.5e+02 Score=26.58 Aligned_cols=76 Identities=9% Similarity=0.083 Sum_probs=48.5
Q ss_pred CceEEEEEcCCeEEEeeCCCCC-------CccEEEEEcCCCCCCCCCCCccccchhhcccCCcceeEEEEeCc------e
Q 001322 247 WQKVWAVLKPGFLALLADPFDT-------KPMDIIVFDVLPASDGNGEGRVSLATEVKERNPLRHAFKVTCGV------R 313 (1100)
Q Consensus 247 w~krW~vvk~s~l~~~~~~~~~-------~~~~v~lfD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~------r 313 (1100)
-+.|.|.+=+..|+|.+ |... +....+-.+ .+.+.. -+.....|||.|.+.. +
T Consensus 33 ~qqR~~FLFND~LL~TK-~~~kkk~~~~Y~vr~~~~L~-----------gm~V~~--~e~e~~p~~~~l~s~~~G~~~k~ 98 (140)
T 3qwm_A 33 LHQREIFLFNDLLVVTK-IFQKKKNSVTYSFRQSFSLY-----------GMQVLL--FENQYYPNGIRLTSSVPGADIKV 98 (140)
T ss_dssp TTEEEEEEESSCEEEEE-CCC---CCCCCCCEEEECCT-----------TEEEEE--ECCSSCTTEEEEEECCTTSCCEE
T ss_pred ccceEEEEecchhhhee-ecccCCCCCceEEEEEeeec-----------ceEEEc--ccCCCCceEEEEEecCCCCcceE
Confidence 35789988888999995 2221 122222111 011111 1223468999999742 6
Q ss_pred EEEEEeCchhhHHHHHHHHHhcc
Q 001322 314 SIRLRTRTGAKVRDWVAAINDAG 336 (1100)
Q Consensus 314 ~l~l~~~~~~~~~~w~~~i~~~~ 336 (1100)
.+.+.+.|.....+|...|.++.
T Consensus 99 ~i~~~A~s~~ER~rwi~dL~esI 121 (140)
T 3qwm_A 99 LINFNAPNPQDRKKFTDDLRESI 121 (140)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHHHH
Confidence 79999999999999998887753
No 120
>2lg1_A A-kinase anchor protein 13; metal binding protein; NMR {Homo sapiens}
Probab=22.01 E-value=1.9e+02 Score=29.31 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=47.3
Q ss_pred CCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCCCCCCCCCccccchh-hcccCCcceeEEEEe----CceEEEEEeC
Q 001322 246 NWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPASDGNGEGRVSLATE-VKERNPLRHAFKVTC----GVRSIRLRTR 320 (1100)
Q Consensus 246 ~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~----~~r~l~l~~~ 320 (1100)
++..++++|=+.+|+|+. +.+.+ -.+.+... ...-+.+..- +.+......+|.+.. |.+.+.|.|.
T Consensus 85 ~~~d~~~fLf~D~Ll~~~-~~~~k---y~~~~~~~-----~~pvi~L~~~~vre~a~d~~~~fli~~~~~g~~~yel~a~ 155 (185)
T 2lg1_A 85 RLKEVQAVLLTDILVFLQ-EKDQK---YIFASLDQ-----KSTVISLKKLIVREVAHEEKGLFLISMGMTDPEMVEVHAS 155 (185)
T ss_dssp CEEEEEEEEESSEEECCE-EETTE---EECCCCSS-----SCSEEESSSCEEECCSSCSSEEEEECCSSSCCCCEEEECS
T ss_pred CeeeEEEEeecCEEEEEE-ecCCE---EEEEcccC-----CCCeEeecceEEeccCCCCCeEEEEEecCCCCeEEEEEcC
Confidence 467889999999999995 33221 11111100 0011111110 111111234666554 3578999999
Q ss_pred chhhHHHHHHHHHhcc
Q 001322 321 TGAKVRDWVAAINDAG 336 (1100)
Q Consensus 321 ~~~~~~~w~~~i~~~~ 336 (1100)
|...-..|+..|..+.
T Consensus 156 s~~er~~W~~~I~~Ai 171 (185)
T 2lg1_A 156 SKEERNSWIQIIQDTI 171 (185)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHH
Confidence 9999999999998865
No 121
>2k8f_B Cellular tumor antigen P53; complex of P53 and P300, acetylation, bromodomain, cell cycle, chromosomal rearrangement, citrullination; NMR {Homo sapiens}
Probab=21.56 E-value=62 Score=24.49 Aligned_cols=16 Identities=25% Similarity=0.756 Sum_probs=13.6
Q ss_pred cccCCCChHHHHHHHH
Q 001322 979 QIIDPVIDSTYKDIWV 994 (1100)
Q Consensus 979 ~~~dp~~~~~~~~~W~ 994 (1100)
.++-|++.++|.++|.
T Consensus 9 siepPLSQETFsdLW~ 24 (39)
T 2k8f_B 9 SVEPPLSQETFSDLWK 24 (39)
T ss_dssp SCCCCCSCHHHHHHHH
T ss_pred ccCCCccHHHHHHHHH
Confidence 3566999999999997
No 122
>3t06_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; DH-PH RHOA complex, pdzrhogef, guanine nucleotide exchange F RHOA, signaling protein; 2.84A {Homo sapiens}
Probab=21.28 E-value=2.1e+02 Score=32.18 Aligned_cols=89 Identities=18% Similarity=0.225 Sum_probs=52.0
Q ss_pred CCceEEEEEcCCeEEEeeCCCCCCccEEEEEcCCCC----CCCC--CCCccccchh-hcccCCcceeEEEEeCc-----e
Q 001322 246 NWQKVWAVLKPGFLALLADPFDTKPMDIIVFDVLPA----SDGN--GEGRVSLATE-VKERNPLRHAFKVTCGV-----R 313 (1100)
Q Consensus 246 ~w~krW~vvk~s~l~~~~~~~~~~~~~v~lfD~~~~----~~~~--~~~~~~~~~~-~~~~~~~~~~~~i~~~~-----r 313 (1100)
+++.+|+++=+.+|+|++.. +.+ .++ .+.... .+.+ ....+.+..- +.+......+|.|.+.. +
T Consensus 309 ~~~~~~~fLF~d~Ll~~k~~-~~k--~~~-~~~~~~~~~~~~~~~~~k~~i~l~~~~v~~~~~~~~~f~l~~~~~~~~~~ 384 (418)
T 3t06_A 309 KTLDLHVLLLEDLLVLLQKQ-DEK--LLL-KCHSKTAVGSSDSKQTFSPVLKLNAVLIRSVATDKRAFFIICTSKLGPPQ 384 (418)
T ss_dssp BCCEEEEEEESSEEEEEEEC-SSC--EEC-CC-------------CCCSEEEGGGEEEEECSSCSSEEEEEECCSSSTTC
T ss_pred CeEEEEEEecCCEEEEEEEc-CCc--eEE-eecccccccCCCcccccCCceechhceeccccccCceEEEEecCCCCCce
Confidence 46679999999999999743 221 111 100000 0000 0112222221 12222345678887642 7
Q ss_pred EEEEEeCchhhHHHHHHHHHhccCC
Q 001322 314 SIRLRTRTGAKVRDWVAAINDAGLR 338 (1100)
Q Consensus 314 ~l~l~~~~~~~~~~w~~~i~~~~~~ 338 (1100)
.+.|.|.|...-..|+..|.++...
T Consensus 385 ~~~l~A~s~~ek~~W~~~I~~a~~~ 409 (418)
T 3t06_A 385 IYELVALTSSDKNTWMELLEEAVRN 409 (418)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999987643
Done!