Query 001323
Match_columns 1100
No_of_seqs 51 out of 53
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 22:14:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001323.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001323hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f6h_X Myosin-2, type V myosin 99.0 5.1E-10 1.7E-14 122.4 9.9 292 603-988 44-347 (419)
2 3mmi_A Myosin-4; globular tail 98.7 9.9E-08 3.4E-12 104.7 12.6 306 569-989 17-332 (386)
3 1ugk_A Synaptotagmin IV, KIAA1 87.7 4.7 0.00016 36.2 10.9 104 20-141 25-132 (138)
4 2enp_A B/K protein; C2 type 1, 85.9 1.4 4.9E-05 40.0 6.5 70 41-128 58-128 (147)
5 3kwu_A MUNC13-1; calcium bindi 83.1 2.1 7.2E-05 38.9 6.3 113 19-159 19-144 (148)
6 3pyc_A E3 ubiquitin-protein li 83.0 10 0.00036 33.7 10.7 119 19-159 7-130 (132)
7 3f04_A Synaptotagmin-1; C2A, c 80.7 6.3 0.00021 35.5 8.5 91 20-128 37-129 (143)
8 1rlw_A Phospholipase A2, CALB 77.5 6.9 0.00023 34.3 7.5 88 20-127 6-97 (126)
9 2ep6_A MCTP2 protein; beta san 75.6 14 0.00048 32.9 9.1 71 71-159 58-129 (133)
10 3n5a_A Synaptotagmin-7; calciu 75.5 7.7 0.00026 34.3 7.3 91 20-128 19-113 (138)
11 2cm5_A Rabphilin-3A; protein t 74.8 6.4 0.00022 36.7 6.9 91 20-128 40-134 (166)
12 3b7y_A E3 ubiquitin-protein li 74.2 4.4 0.00015 37.0 5.5 119 19-159 22-150 (153)
13 1rsy_A Synaptotagmin I; calciu 73.9 7.6 0.00026 35.7 7.0 90 20-127 45-136 (152)
14 2d8k_A Synaptotagmin VII; exoc 73.5 6.1 0.00021 35.7 6.2 92 20-128 29-122 (141)
15 2r83_A Synaptotagmin-1; C2A-C2 73.3 20 0.00069 35.7 10.4 90 20-127 22-113 (284)
16 3m7f_B E3 ubiquitin-protein li 72.8 5.5 0.00019 37.6 6.0 76 71-161 59-140 (176)
17 1wfm_A Synaptotagmin XIII; C2 72.2 2.2 7.4E-05 38.9 3.0 46 71-127 72-118 (138)
18 1wfj_A Putative elicitor-respo 71.9 4.5 0.00015 36.1 4.9 72 71-160 56-128 (136)
19 2dmh_A Myoferlin; beta-sandwic 71.9 13 0.00043 33.3 7.8 88 19-127 9-98 (140)
20 2z0u_A WW domain-containing pr 70.0 1.6 5.5E-05 41.3 1.6 46 71-127 94-140 (155)
21 1tjx_A Similar to synaptotagmi 67.5 9.1 0.00031 35.3 6.1 91 20-128 28-122 (159)
22 1v27_A Regulating synaptic mem 67.4 30 0.001 30.7 9.2 91 20-127 24-120 (141)
23 2b3r_A Phosphatidylinositol-4- 64.1 15 0.00051 33.3 6.7 46 71-127 69-116 (134)
24 1a25_A CALB, protein kinase C 64.0 26 0.0009 31.9 8.4 89 20-127 34-126 (149)
25 3fdw_A Synaptotagmin-like prot 61.8 4.2 0.00014 37.1 2.7 47 71-128 74-121 (148)
26 1w15_A Synaptotagmin IV; metal 60.1 5.3 0.00018 36.5 3.0 89 20-126 33-125 (153)
27 1rh8_A Piccolo protein; beta-s 59.5 3.3 0.00011 37.2 1.6 92 19-128 20-125 (142)
28 2chd_A Rabphilin-3A, exophilin 58.4 19 0.00066 32.3 6.3 91 20-128 32-127 (142)
29 2fk9_A Protein kinase C, ETA t 57.7 11 0.00039 36.3 5.0 65 72-159 86-154 (157)
30 2dmg_A KIAA1228 protein; beta- 55.5 24 0.00082 31.7 6.5 92 20-129 27-123 (142)
31 2bwq_A Regulating synaptic mem 54.7 8.1 0.00028 34.0 3.2 93 19-128 20-118 (129)
32 2q3x_A Regulating synaptic mem 53.2 5.3 0.00018 37.8 1.9 44 71-128 81-126 (171)
33 1gmi_A Protein kinase C, epsil 52.8 9.1 0.00031 34.5 3.3 42 71-127 63-105 (136)
34 2nq3_A Itchy homolog E3 ubiqui 50.0 16 0.00056 35.1 4.7 75 71-161 81-160 (173)
35 1dqv_A Synaptotagmin III; beta 49.7 90 0.0031 31.7 10.3 89 20-126 23-114 (296)
36 3rdl_A Protein kinase C alpha 48.8 38 0.0013 29.9 6.5 75 50-145 52-127 (137)
37 3l9b_A Otoferlin; C2-domain, b 46.6 13 0.00046 36.6 3.5 121 15-162 19-142 (144)
38 1dqv_A Synaptotagmin III; beta 44.6 6.3 0.00022 40.1 1.0 48 71-129 202-250 (296)
39 2cjt_A UNC-13 homolog A, MUNC1 43.4 15 0.0005 33.8 3.1 43 71-127 46-88 (131)
40 2lme_A Adhesin YADA; trimeric 42.6 25 0.00086 32.4 4.5 32 564-595 14-45 (105)
41 2r83_A Synaptotagmin-1; C2A-C2 42.4 16 0.00054 36.5 3.4 47 71-128 200-247 (284)
42 3fbk_A RGS3, RGP3, regulator o 41.2 59 0.002 29.8 6.8 45 71-127 76-122 (153)
43 2cjs_A UNC-13 homolog A, MUNC1 38.3 16 0.00054 35.3 2.6 43 71-127 55-97 (167)
44 1dip_A Delta-sleep-inducing pe 26.3 57 0.002 29.7 3.9 37 553-589 9-48 (78)
45 3ra3_B P2F; coiled coil domain 22.1 77 0.0026 23.8 3.2 23 564-589 5-27 (28)
46 1djx_A PLC-D1, phosphoinositid 21.0 2.8E+02 0.0096 32.1 9.3 120 15-159 495-621 (624)
47 2er8_A Regulatory protein Leu3 20.4 46 0.0016 27.5 2.0 22 564-585 47-68 (72)
No 1
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae}
Probab=99.02 E-value=5.1e-10 Score=122.40 Aligned_cols=292 Identities=15% Similarity=0.222 Sum_probs=188.1
Q ss_pred ccccCchhhhhhHHHHHHhcccchhhhhHHHhhhccceEEEeecc-cCC-CCcchhhhhhHHHHHHHH--HHHhcCCCCC
Q 001323 603 MSKVHAPARRLSRLYLHACKEDFQSRRASAARSAVSGLVLVAKAC-GND-VPRLTFWLSNSIVLRAII--SQATGRLEQP 678 (1100)
Q Consensus 603 shKvHtPARRLSRlYiHAcK~~s~~krAsaArn~VSGLVLVaKaC-GND-VpRLTFWLSNtVVLReII--Sqa~g~~~~~ 678 (1100)
.+-+-.||.=|-..=.|+.|.....++-+.--.++.++=-|.+.+ |+| +..|.|||||+.-|--.+ .|......
T Consensus 44 ~~~~l~PA~il~~cl~~~~~~~~~~~~~~ll~~ii~~I~~~v~~~~~~d~i~~lafWLSN~~~LL~~L~~k~~~~~~~-- 121 (419)
T 2f6h_X 44 KRDVVYPARILIIVLSEMWRFGLTKQSESFLAQVLTTIQKVVTQLKGNDLIPSGVFWLANVRELYSFVVFALNSILTE-- 121 (419)
T ss_dssp HHHHSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCcchHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHhhhhhhcc--
Confidence 455668888877666667777444444344444444444444455 467 588999999999999988 44431000
Q ss_pred CccccccccCcccCCCCCCCCccccccccccccccccccCCCCCCCCC----ccchHHHHHhhHHHHHhHhHHhhhhc--
Q 001323 679 FAAGQSLERNSSQRGNNNITSPLKWKESASRKKDNRNVMRGSFDDWED----PHTLPSALEKVEAWIFSRIVESIWWQ-- 752 (1100)
Q Consensus 679 ~~~~~~~~~ng~~~~~~~~~~~~~wk~~~~~k~~~~~~~~~~~ddW~e----~~Tf~~ALeKVEsWIFSRIVESVWWQ-- 752 (1100)
+ +. ..++ ...+|.+ ...|...|+-+.-.||+.++..+-=.
T Consensus 122 ----------~-~~-----~~~~------------------~~~~~~~y~~l~~~~~~~L~~l~~~iy~~li~~l~k~L~ 167 (419)
T 2f6h_X 122 ----------E-TF-----KNGM------------------TDEEYKEYVSLVTELKDDFEALSYNIYNIWLKKLQKQLQ 167 (419)
T ss_dssp ----------C-C---------C------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------C-cc-----cccc------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 0000 0122221 33456678888889999887554321
Q ss_pred -ccccccchhhccccccccCcccc-ccccCcCCCccccccchhHHHHHHHHHHHHHHccccCCCCCCCCchHHHHHHHHH
Q 001323 753 -TLTPHMQSAAERVMDRDIGSCSR-KNLERTSSSGDQEQINFSLDHWKKAFKDACERLCPVRARGHECGCLPLLARLIME 830 (1100)
Q Consensus 753 -alTPhMQs~~~~~~~~~~~s~s~-k~~~~~~~lgDq~QGnfSI~lWK~AF~dA~~RLCP~Ra~gheCGCLpvLarlVme 830 (1100)
.+.|-|+-+..- ......+ .++.+. .... +...+++-=-+-|......|+ .|+==|.|.++++.
T Consensus 168 p~l~paIl~~~~~----~~~~~~~~~~~~~k-~~~~--~~~~~~~~Il~~L~~~~~~L~-------~~~V~~~l~~Q~fs 233 (419)
T 2f6h_X 168 KKAINAVVISESL----PGFSAGETSGFLNK-IFAN--TEEYTMDDILTFFNSIYWCMK-------SFHIENEVFHAVVT 233 (419)
T ss_dssp HHHHHHHTTSCSS----TTTTC------------------CCCHHHHHHHHHHHHHHHH-------HTTCCHHHHHHHHH
T ss_pred HHHHHHHhCcccc----cccccccccccccc-cccC--CCccCHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHH
Confidence 233444332211 0000000 011111 1111 122344333344444444443 34455899999999
Q ss_pred HHHHHhHHHHHHHHhcccCCCCCCCCCCCCCCCCcccccCCCCccccchhhhhhhhhhhHHHHhhhcCCCCCCCcccCCC
Q 001323 831 QCVARLDVAMFNAILRESADEIPTDPVSDPISDSKVLPIPAGKSSFGAGAQLKNAIGNWSRWLSDLFGMDDDDSLDNENE 910 (1100)
Q Consensus 831 qcVaRLDVAMFNAILRES~~eiPTDPiSDPI~D~kVLPIPaG~lSFGaGAQLKnaIgnWSRwLtDlFGid~~d~~~~~~~ 910 (1100)
|+..=+++-+||.||-. ++-.+|-.|+|+|.-|+..-.|+.+. |+..
T Consensus 234 Qlf~~In~~lFN~LL~r-----------------------~~~cs~s~G~qIr~nls~Le~W~~~~-~l~~--------- 280 (419)
T 2f6h_X 234 TLLNYVDAICFNELIMK-----------------------RNFLSWKRGLQLNYNVTRLEEWCKTH-GLTD--------- 280 (419)
T ss_dssp HHHHHHHHHHHHHHHTC-----------------------SSCCCHHHHHHHHHHHHHHHHHHHHT-TCTT---------
T ss_pred HHHHHHHHHHHHHHhcc-----------------------CcccchhhHHHHHhhHHHHHHHHHHc-CChh---------
Confidence 99999999999999852 23589999999999999999999987 5420
Q ss_pred CCccccccCCccchhhhhHhhhcccccchhhccccccccccCCCCChhhHHHhhcccCCCCCCCCCCChHHHHhhccc
Q 001323 911 HDADDERQDSSFKSFHLLNALSDLMMLPKDLLLSRSIRKEVCPTFGAPLIKRVLDNFCPDEFCPDPIPRVVLEALDSE 988 (1100)
Q Consensus 911 ~~~~~~~~~~~fk~F~LLnalSDLLMLPKDML~d~SiRkEVCP~~~lpLIkRIL~nF~PDEFcPDPVP~~VlEaLnsE 988 (1100)
.-..|.-|+.++.||.++|.-+.|-....++||.|+..-|.|||..|.||+| .+|||+.|+..+.+.
T Consensus 281 ----------a~~~L~~l~Qa~~lLq~~k~~~~d~~~i~~~C~~Ln~~Ql~~il~~Y~~d~~-e~~v~~~~i~~v~~~ 347 (419)
T 2f6h_X 281 ----------GTECLQHLIQTAKLLQVRKYTIEDIDILRGICYSLTPAQLQKLISQYQVADY-ESPIPQEILRYVADI 347 (419)
T ss_dssp ----------HHHHTHHHHHHHHHTTSCCSSHHHHHHHHHHTTTSCHHHHHHHHHHCCCCTT-SCCCCHHHHHHHHHH
T ss_pred ----------HHHHHHHHHHHHHHHhhCCCchhhHHHHHHHhhcCCHHHHHHHHHhCCCccC-CCCCCHHHHHHHHHH
Confidence 1125788999999999999988888889999999999999999999999999 999999999998754
No 2
>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae}
Probab=98.67 E-value=9.9e-08 Score=104.71 Aligned_cols=306 Identities=14% Similarity=0.156 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccccccCCCccccCchhhhhhHHHHHHhcccchhhhhHHHhhhccceEEEeec-c
Q 001323 569 QQLEHKINMLETELREAAAIEASLYSVVAEHGSSMSKVHAPARRLSRLYLHACKEDFQSRRASAARSAVSGLVLVAKA-C 647 (1100)
Q Consensus 569 eele~rie~LE~ELREaAAlEvsLYSVVaEHGSSshKvHtPARRLSRlYiHAcK~~s~~krAsaArn~VSGLVLVaKa-C 647 (1100)
+||...++.+..+-.|++ |-=|.- ||.---+..=|-.||+=|.-.-=|+-|+.-..+--+.--++++++==+.|. =
T Consensus 17 ~el~~ll~d~~~~~~ei~--~gl~~~-ip~~~~~~~evl~PA~ii~~~~~~m~~~gl~~~s~~fl~~v~~~I~~~v~~~~ 93 (386)
T 3mmi_A 17 PDLLELLMDLNCYTLEVT--EGYLKK-VNVTEVNGDNVLGPIHVITTVVSSLVRNGLLIQSSKFISKVLLTVESIVMSLP 93 (386)
T ss_dssp -CHHHHHHCHHHHHHHHH--HHTSTT-CCCSCCCC---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhHHHHH--HHHhhc-CCCCCCCccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444444444444444443 222333 555445666788999999888888877655333222222222222222244 3
Q ss_pred cCC-CCcchhhhhhHHHHHHHHHHHhcCCCCCCccccccccCcccCCCCCCCCccccccccccccccccccCCCCCCCCC
Q 001323 648 GND-VPRLTFWLSNSIVLRAIISQATGRLEQPFAAGQSLERNSSQRGNNNITSPLKWKESASRKKDNRNVMRGSFDDWED 726 (1100)
Q Consensus 648 GND-VpRLTFWLSNtVVLReIISqa~g~~~~~~~~~~~~~~ng~~~~~~~~~~~~~wk~~~~~k~~~~~~~~~~~ddW~e 726 (1100)
|.| ++...|||||+--|+.-|.-+-.... . +.|.+
T Consensus 94 ~~d~i~~g~FWLsN~~~l~sFv~~~q~~~~----------~----------------------------------~~~d~ 129 (386)
T 3mmi_A 94 KDETMLGGIFWLSNLSRLPAFAANQKTLYE----------A----------------------------------NGGDE 129 (386)
T ss_dssp TTTHHHHHHHHHHHHTTHHHHHHHHHTTC---------------------------------------------------
T ss_pred CccccccchHHHHhHHHHHHHHHHHHHHHH----------c----------------------------------cChhH
Confidence 788 89999999999777775444331000 0 01333
Q ss_pred ccchH----HHHHhhHH----HHHhHhHHhhhhcccccccchhhccccccccCccccccccCcCCCccccccchhHHHHH
Q 001323 727 PHTLP----SALEKVEA----WIFSRIVESIWWQTLTPHMQSAAERVMDRDIGSCSRKNLERTSSSGDQEQINFSLDHWK 798 (1100)
Q Consensus 727 ~~Tf~----~ALeKVEs----WIFSRIVESVWWQalTPhMQs~~~~~~~~~~~s~s~k~~~~~~~lgDq~QGnfSI~lWK 798 (1100)
-..++ .-|+.++- .||.-++..+= .-|.|.. |+.. .. +..++. + ....++++-=-
T Consensus 130 y~~ll~e~r~~l~~L~~~~~e~IY~~~i~~lk-k~L~~il--P~~~------~~----~~~k~~--~--~~~~~s~~~Il 192 (386)
T 3mmi_A 130 KDKLTLIYLNDLENETLKVFDKIYSTWLVKFM-KHASAHI--EIFD------MV----LNEKLF--K--NSGDEKFAKLF 192 (386)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--THHH------HH----TCGGGS--S--SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHhhc--cccc------cc----cccccc--C--CCCccCHHHHH
Confidence 33333 35677777 88875554431 0111211 1111 01 122221 1 12345544444
Q ss_pred HHHHHHHHHccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhcccCCCCCCCCCCCCCCCCcccccCCCCccccc
Q 001323 799 KAFKDACERLCPVRARGHECGCLPLLARLIMEQCVARLDVAMFNAILRESADEIPTDPVSDPISDSKVLPIPAGKSSFGA 878 (1100)
Q Consensus 799 ~AF~dA~~RLCP~Ra~gheCGCLpvLarlVmeqcVaRLDVAMFNAILRES~~eiPTDPiSDPI~D~kVLPIPaG~lSFGa 878 (1100)
+-|......|+ .|+==|.|.++++.|+..=+++.+||.||-. .+-.+|..
T Consensus 193 ~~L~~~~~~L~-------~~~V~p~li~QlfsQLF~fIna~lFN~LLlR-----------------------r~~cs~s~ 242 (386)
T 3mmi_A 193 TFLNEFDAVLC-------KFQVVDSMHTKIFNDTLKYLNVMLFNDLITK-----------------------CPALNWKY 242 (386)
T ss_dssp HHHHHHHHHHH-------HTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCCBCHHH
T ss_pred HHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHhHHHHHHHHcc-----------------------CcccCcch
Confidence 44444444443 3455589999999999999999999999862 35689999
Q ss_pred hhhhhhhhhhhHHHHhhhcCCCCCCCcccCCCCCccccccCCccchhhhhHhhhcccccchhhccccccccccCCCCChh
Q 001323 879 GAQLKNAIGNWSRWLSDLFGMDDDDSLDNENEHDADDERQDSSFKSFHLLNALSDLMMLPKDLLLSRSIRKEVCPTFGAP 958 (1100)
Q Consensus 879 GAQLKnaIgnWSRwLtDlFGid~~d~~~~~~~~~~~~~~~~~~fk~F~LLnalSDLLMLPKDML~d~SiRkEVCP~~~lp 958 (1100)
|+|+|.-|...-.|+.. |+.. ....|.-|+.++.||-+||.-+.|-.+-.++||.++..
T Consensus 243 G~qIr~NLs~LEeW~~~--~l~~-------------------a~~~L~~L~QA~~LLQ~~K~t~~Di~~i~~~C~~Lsp~ 301 (386)
T 3mmi_A 243 GYEVDRNIERLVSWFEP--RIED-------------------VRPNLIQIIQAVKILQLKISNLNEFKLLFDFWYALNPA 301 (386)
T ss_dssp HHHHHHHHHHHHHHHTT--TSSC-------------------CGGGGHHHHHHHHHHHCCCCCHHHHHHHHTTCCSSCHH
T ss_pred HHHHHhhHHHHHHHHHh--ccHH-------------------HHHHHHHHHHHHHHHccCCCCHHHHHHHHHhcccCCHH
Confidence 99999999999999988 5431 11368889999999999998888887778999999999
Q ss_pred hHHHhhcccCCCCCCCCCCChHHHHhhcccc
Q 001323 959 LIKRVLDNFCPDEFCPDPIPRVVLEALDSED 989 (1100)
Q Consensus 959 LIkRIL~nF~PDEFcPDPVP~~VlEaLnsE~ 989 (1100)
-|.+||..|.||++..+|||+.++.++.+-.
T Consensus 302 QL~kIL~~Y~p~~~~E~~V~~e~i~~v~~~l 332 (386)
T 3mmi_A 302 QIQAILLKYKPANKGEAGVPNEILNYLANVI 332 (386)
T ss_dssp HHHHHHHTBCCC-----CCCHHHHHHHHHHH
T ss_pred HHHHHHHhCcCCCCCCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999987644
No 3
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=87.73 E-value=4.7 Score=36.23 Aligned_cols=104 Identities=13% Similarity=0.248 Sum_probs=64.6
Q ss_pred EEEeeeecCCCCcccc--cccceeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeee-EEEEeecccCCCCcch
Q 001323 20 QIHIQDIKPWPPSQSL--RSLRSVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLR-VTLLRDMNVKNKDADT 96 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSl--rS~rSVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~-vtl~~e~s~kg~~~~~ 96 (1100)
.|+|.+-+-.|+.... .+===|.+...++......|.++--++ .=.|||.|.+. +.. +.
T Consensus 25 ~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~v~~-----------~~ 86 (138)
T 1ugk_A 25 VVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTL-------DPAFDETFTFYGIPY-----------TQ 86 (138)
T ss_dssp EEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCS-------SCEEEEEEEEECCCS-----------TT
T ss_pred EEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCC-------CCcEeeEEEEcCcCH-----------HH
Confidence 5777777777765432 111125556655455666666654332 24699999875 221 23
Q ss_pred hcccceeeeecccccc-cccccceeeeccccccccccceeeccccc
Q 001323 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKETLSVNAPMN 141 (1100)
Q Consensus 97 f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~gii~e~~si~~p~n 141 (1100)
++...|.|.+|+-.+- +-.+||.+.|+|+++-.-.+...+-.++-
T Consensus 87 ~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~ 132 (138)
T 1ugk_A 87 IQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREII 132 (138)
T ss_dssp GGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECB
T ss_pred hccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhh
Confidence 4567899999986442 22899999999999865555555545543
No 4
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.92 E-value=1.4 Score=40.01 Aligned_cols=70 Identities=14% Similarity=0.196 Sum_probs=47.7
Q ss_pred eEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccce
Q 001323 41 VMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLAT 119 (1100)
Q Consensus 41 VllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGt 119 (1100)
|.+...++.+....|.++--++ .=.|||.|.++|.. +..+...|.|.||+-.+- +-++||.
T Consensus 58 v~v~l~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l~~~~L~~~V~d~d~~~~~~~iG~ 119 (147)
T 2enp_A 58 VKICLLPDQKNSKQTGVKRKTQ-------KPVFEERYTFEIPF-----------LEAQRRTLLLTVVDFDKFSRHCVIGK 119 (147)
T ss_dssp EEEEEETCCSSCEECCCCCSCS-------SCCCCBCCEECCCH-----------HHHHHSEEEEEEECCSTTCCSCCCEE
T ss_pred EEEEEEeCCCcceEeecccCCC-------CCeEeeeEEEEeCh-----------HHhccCEEEEEEEECCCCcCCcEEEE
Confidence 5666666555666666654332 24799999987531 234456899999987542 2379999
Q ss_pred eeecccccc
Q 001323 120 ATIDLADYG 128 (1100)
Q Consensus 120 A~inLAd~g 128 (1100)
+.|+|+++.
T Consensus 120 ~~i~l~~l~ 128 (147)
T 2enp_A 120 VSVPLCEVD 128 (147)
T ss_dssp EEEETTTSC
T ss_pred EEEechhcC
Confidence 999999874
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=83.09 E-value=2.1 Score=38.87 Aligned_cols=113 Identities=16% Similarity=0.239 Sum_probs=65.2
Q ss_pred EEEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchh
Q 001323 19 YQIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTF 97 (1100)
Q Consensus 19 y~IhiqeIkPWPpSqSlrS~r-SVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f 97 (1100)
..|+|.+-+-.|+.......- -|.+.. |. ....|.++--++ .=.|||.|.+++.. .
T Consensus 19 L~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~-~~~kT~~~~~t~-------nP~Wne~f~f~v~~-------~------ 75 (148)
T 3kwu_A 19 ISITVVCAQGLQAKDKTGSSDPYVTVQV--GK-TKKRTKTIYGNL-------NPVWEENFHFECHN-------S------ 75 (148)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEE--TT-EEEECCCCCSCS-------SCEEEEEEEEEECS-------T------
T ss_pred EEEEEEeeeCCCCCCCCCCcCeEEEEEE--CC-EEEECCccCCCC-------CCCcccEEEEEecC-------C------
Confidence 345666666555543221111 133444 22 334555544332 23699999887641 0
Q ss_pred cccceeeeecccccc------------cccccceeeeccccccccccceeeccccccccccccCCCceEEEEee
Q 001323 98 LKNCLEFNLYEPRRD------------KTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNTAQPVLFIKIQ 159 (1100)
Q Consensus 98 ~KN~LEfnlye~rrd------------K~QlLGtA~inLAd~gii~e~~si~~p~n~krs~rn~~qp~lyv~Iq 159 (1100)
...|.|.+|+-... +-.+||.+.|+|.+++ .....-.||. ++......+-.|+|+|.
T Consensus 76 -~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~---~~~~~w~~L~-~~~~~~~~~G~i~l~l~ 144 (148)
T 3kwu_A 76 -SDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS---GEMDVWYNLD-KRTDKSAVSGAIRLHIS 144 (148)
T ss_dssp -TCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC---SEEEEEEECB-CSSTTCCCCCEEEEEEE
T ss_pred -CCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc---CCCCEEEEcc-cCCCCCCCceEEEEEEE
Confidence 13699999987653 4489999999999983 3334456665 44444445667777664
No 6
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=83.04 E-value=10 Score=33.74 Aligned_cols=119 Identities=14% Similarity=0.149 Sum_probs=66.3
Q ss_pred EEEEeeeecCCCCcccccccceeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001323 19 YQIHIQDIKPWPPSQSLRSLRSVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (1100)
Q Consensus 19 y~IhiqeIkPWPpSqSlrS~rSVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f~ 98 (1100)
..|+|.+-+-.|+.......-.-+.-+-+++.....|.++--++ .=.|||.|.+.+.- . +
T Consensus 7 L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-------~------~ 66 (132)
T 3pyc_A 7 IRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTL-------DPKWNQHYDLYVGK-------T------D 66 (132)
T ss_dssp EEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCS-------SCEEEEEEEEEEET-------T------C
T ss_pred EEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCC-------CCCccCEEEEEeCC-------C------C
Confidence 44556555545443322222222333334434556666553222 23699999887621 1 1
Q ss_pred ccceeeeecccccc-c---ccccceeeeccccccccccceeecccccccc-ccccCCCceEEEEee
Q 001323 99 KNCLEFNLYEPRRD-K---TQLLATATIDLADYGIVKETLSVNAPMNSKR-SFRNTAQPVLFIKIQ 159 (1100)
Q Consensus 99 KN~LEfnlye~rrd-K---~QlLGtA~inLAd~gii~e~~si~~p~n~kr-s~rn~~qp~lyv~Iq 159 (1100)
.|.|.+|+-.+- | -.+||.+.|.|+++.-..+......++.-+. .-....+-.|.|.|+
T Consensus 67 --~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 67 --SITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp --CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred --EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 399999987653 2 3799999999988755555444556664322 222234666777664
No 7
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=80.75 E-value=6.3 Score=35.53 Aligned_cols=91 Identities=16% Similarity=0.186 Sum_probs=57.2
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001323 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~r-SVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f~ 98 (1100)
.|+|.+-+--|+.......- -|.+..-+++.....|.++--++ .=.|||.|.+.|.. ....
T Consensus 37 ~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l~ 98 (143)
T 3f04_A 37 LVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTL-------NPVFNEQFTFKVPY-----------SELG 98 (143)
T ss_dssp EEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCS-------SCEEEEEEEECCCH-----------HHHT
T ss_pred EEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCC-------CCcCcCeEEEeecH-----------hhcC
Confidence 57777777666654322111 24455545555566666654332 24699999887532 2244
Q ss_pred ccceeeeecccccc-cccccceeeecccccc
Q 001323 99 KNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 99 KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
...|.|.+|+-.+- +-.+||.+.|+|+++-
T Consensus 99 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~ 129 (143)
T 3f04_A 99 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVD 129 (143)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCC
T ss_pred CCEEEEEEEeCCCCCCCceEEEEEEEHHHcc
Confidence 57899999986542 3389999999999873
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=77.47 E-value=6.9 Score=34.33 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=52.9
Q ss_pred EEEeeeecCCCCc---ccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcc
Q 001323 20 QIHIQDIKPWPPS---QSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDAD 95 (1100)
Q Consensus 20 ~IhiqeIkPWPpS---qSlrS~r-SVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~ 95 (1100)
.|+|.+-+-.|+. ......- =|.+...+.......|.++--++ .=.|||.|.+++...
T Consensus 6 ~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~~----------- 67 (126)
T 1rlw_A 6 TVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDI-------NPVWNETFEFILDPN----------- 67 (126)
T ss_dssp EEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCS-------SCEEEEEEEEEECTT-----------
T ss_pred EEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCC-------CCcccceEEEEecCC-----------
Confidence 4566666666652 1111111 14555544334555555543222 236999999986221
Q ss_pred hhcccceeeeecccccccccccceeeeccccc
Q 001323 96 TFLKNCLEFNLYEPRRDKTQLLATATIDLADY 127 (1100)
Q Consensus 96 ~f~KN~LEfnlye~rrdK~QlLGtA~inLAd~ 127 (1100)
....|.|.+|+-.+-+-.+||.+.|+|.++
T Consensus 68 --~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l 97 (126)
T 1rlw_A 68 --QENVLEITLMDANYVMDETLGTATFTVSSM 97 (126)
T ss_dssp --SCCEEEEEEEECCSSCCEEEEEEEEEGGGS
T ss_pred --CCCEEEEEEEECCCCCCceeEEEEEEHHHc
Confidence 135799999987554448999999999986
No 9
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=75.59 E-value=14 Score=32.93 Aligned_cols=71 Identities=15% Similarity=0.376 Sum_probs=46.6
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccccccccceeeccccccccccccC
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNT 149 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~gii~e~~si~~p~n~krs~rn~ 149 (1100)
=.|||.|.+++. + . ...|.|.+|+-.+- +-.+||.+.|+|.++- .....-+||.- +..+..
T Consensus 58 P~wne~f~f~~~---~-------~----~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~---~~~~~w~~L~~-~~~~~~ 119 (133)
T 2ep6_A 58 PEWNKVFTFPIK---D-------I----HDVLEVTVFDEDGDKPPDFLGKVAIPLLSIR---DGQPNCYVLKN-KDLEQA 119 (133)
T ss_dssp CCCCEEEEEEES---C-------T----TCEEEEEEEEEETTEEEEECCBCEEEGGGCC---SSCCEECCCBC-SCTTSC
T ss_pred CccccEEEEEec---C-------C----CCEEEEEEEECCCCCCCCeeEEEEEEHHHcc---CCCceEEEeec-CCCCCc
Confidence 369999999873 1 1 24699999987553 3389999999999973 22234455542 222345
Q ss_pred CCceEEEEee
Q 001323 150 AQPVLFIKIQ 159 (1100)
Q Consensus 150 ~qp~lyv~Iq 159 (1100)
.+-.|.|+|+
T Consensus 120 ~~G~i~l~i~ 129 (133)
T 2ep6_A 120 FKGVIYLEMD 129 (133)
T ss_dssp CSSEEEEEEE
T ss_pred cceEEEEEEE
Confidence 5677777765
No 10
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=75.45 E-value=7.7 Score=34.31 Aligned_cols=91 Identities=12% Similarity=0.131 Sum_probs=53.4
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCC--CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001323 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGD--RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~r-SVllqWENGd--~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~ 96 (1100)
.|+|.+-+-.|+.......- -|.+...+++ .....|.++--++ .=.|||.|.+.|. .+.
T Consensus 19 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~-------nP~wne~f~f~v~-----------~~~ 80 (138)
T 3n5a_A 19 IVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNL-------NPIFNESFAFDIP-----------TEK 80 (138)
T ss_dssp EEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCS-------SCEEEEEEEEECC-----------GGG
T ss_pred EEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCC-------CCcCcceEEEECC-----------hhh
Confidence 56666666666543321111 1334443322 2345555554332 2479999988743 123
Q ss_pred hcccceeeeecccccc-cccccceeeecccccc
Q 001323 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 97 f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
.+...|.|.+|+-.+- |-.+||.+.|+|.+.+
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 4567899999986542 3389999999998744
No 11
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=74.82 E-value=6.4 Score=36.66 Aligned_cols=91 Identities=12% Similarity=0.152 Sum_probs=55.4
Q ss_pred EEEeeeecCCCCcccccccce-eEEEeecCC--CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001323 20 QIHIQDIKPWPPSQSLRSLRS-VMIQWQNGD--RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~rS-VllqWENGd--~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~ 96 (1100)
.|+|.+-+--|+.......-. |.+...++. .....|.++--+ -.-.|||.|.+++.. ..
T Consensus 40 ~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t-------~nP~wne~f~f~v~~-----------~~ 101 (166)
T 2cm5_A 40 IVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKT-------LNPEFNEEFFYDIKH-----------SD 101 (166)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSC-------SSCEEEEEEEEECCG-----------GG
T ss_pred EEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCC-------CCCcccceEEEEcch-----------Hh
Confidence 567777776666433221121 444443322 345555555322 235799999887632 12
Q ss_pred hcccceeeeecccccc-cccccceeeecccccc
Q 001323 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 97 f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
.+...|.|.||+-.+- +-.+||.+.|+|.+.|
T Consensus 102 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 102 LAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred cCCCEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 4456899999987553 3389999999999865
No 12
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=74.24 E-value=4.4 Score=36.98 Aligned_cols=119 Identities=16% Similarity=0.179 Sum_probs=61.6
Q ss_pred EEEEeeeecCCCCcccccccc-eeEEEeecCC---CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCc
Q 001323 19 YQIHIQDIKPWPPSQSLRSLR-SVMIQWQNGD---RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDA 94 (1100)
Q Consensus 19 y~IhiqeIkPWPpSqSlrS~r-SVllqWENGd---~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~ 94 (1100)
..|+|.+-+-.|+.......- =|.+...+.. .....|.++--++ .=.|||.|.+++.-
T Consensus 22 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~----------- 83 (153)
T 3b7y_A 22 VRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSL-------NPKWNEEILFRVHP----------- 83 (153)
T ss_dssp EEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCS-------SCCCCEEEEEEECT-----------
T ss_pred EEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCC-------CCCCCCEEEEEecC-----------
Confidence 345565655555443221111 1444443221 1344555443322 24689999887641
Q ss_pred chhcccceeeeecccccc-cccccceeeeccccccccccc-----eeeccccccccccccCCCceEEEEee
Q 001323 95 DTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKET-----LSVNAPMNSKRSFRNTAQPVLFIKIQ 159 (1100)
Q Consensus 95 ~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~gii~e~-----~si~~p~n~krs~rn~~qp~lyv~Iq 159 (1100)
....|.|.+|+-.+- +-.+||.+.|+|.++---... ...-.||.-++ -+...+-.|.|+|+
T Consensus 84 ---~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~-~~~~~~G~i~l~l~ 150 (153)
T 3b7y_A 84 ---QQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRS-HKSRVKGYLRLKMT 150 (153)
T ss_dssp ---TTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSS-TTCCCCSEEEEEEE
T ss_pred ---CCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCccccccccccccccccc-CCCCcceEEEEEEE
Confidence 135799999987553 338999999999987443322 12344554332 12334555555553
No 13
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=73.87 E-value=7.6 Score=35.65 Aligned_cols=90 Identities=17% Similarity=0.188 Sum_probs=56.0
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001323 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~r-SVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f~ 98 (1100)
.|+|.+-+--|+.......- =|.+..-++++....|.++--++ .=.|||.|.+.|.. +...
T Consensus 45 ~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l~ 106 (152)
T 1rsy_A 45 LVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTL-------NPVFNEQFTFKVPY-----------SELG 106 (152)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCS-------SCEEEEEEEECCCH-----------HHHT
T ss_pred EEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCC-------CCcCcccEEEeecH-----------HHcC
Confidence 56666666666643221111 14445545455566666654332 35799999886531 1234
Q ss_pred ccceeeeecccccc-cccccceeeeccccc
Q 001323 99 KNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (1100)
Q Consensus 99 KN~LEfnlye~rrd-K~QlLGtA~inLAd~ 127 (1100)
...|.|.||+-.+- +-.+||.+.|+|+++
T Consensus 107 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 136 (152)
T 1rsy_A 107 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 136 (152)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGC
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEchhc
Confidence 57899999987542 338999999999986
No 14
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.50 E-value=6.1 Score=35.65 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=55.0
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001323 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~r-SVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f~ 98 (1100)
.|+|.+-+-.|+.......- =|.+...+++.....|.++--++ .=.|||.|.+.+. ..+...
T Consensus 29 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~~----------~~~~~~ 91 (141)
T 2d8k_A 29 TVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNL-------NPHWNETFLFEGF----------PYEKVV 91 (141)
T ss_dssp EEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCS-------SCCCCEEEEECSC----------CHHHHT
T ss_pred EEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCC-------CCccccEEEECcc----------CHHHcc
Confidence 46666666666543221111 25555554444555665553222 2468999987631 112234
Q ss_pred ccceeeeecccccc-cccccceeeecccccc
Q 001323 99 KNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 99 KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
...|.|.+|+-.+- |-.+||.+.|+|.++-
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~ 122 (141)
T 2d8k_A 92 QRILYLQVLDYDRFSRNDPIGEVSIPLNKVD 122 (141)
T ss_dssp TSEEEEEEEECCSSSSCEEEEEEEEETTTSC
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEhhhhc
Confidence 56799999987552 3389999999999863
No 15
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=73.30 E-value=20 Score=35.69 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=55.0
Q ss_pred EEEeeeecCCCCccccc-ccceeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001323 20 QIHIQDIKPWPPSQSLR-SLRSVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlr-S~rSVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f~ 98 (1100)
.|+|.+-+-.|+..... +===|.+...+++.....|.++--++ .=.|||.|.+.|.. +..+
T Consensus 22 ~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~-------nP~wne~f~f~v~~-----------~~~~ 83 (284)
T 2r83_A 22 LVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTL-------NPVFNEQFTFKVPY-----------SELA 83 (284)
T ss_dssp EEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCS-------SCEEEEEEEECCCG-----------GGCT
T ss_pred EEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCC-------CCeeCceEEEEech-----------HHhC
Confidence 45666666666533211 11125556655545555565554322 24699999887531 1244
Q ss_pred ccceeeeecccccc-cccccceeeeccccc
Q 001323 99 KNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (1100)
Q Consensus 99 KN~LEfnlye~rrd-K~QlLGtA~inLAd~ 127 (1100)
...|.|.+|+-.+- +-.+||.+.|+|.++
T Consensus 84 ~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l 113 (284)
T 2r83_A 84 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 113 (284)
T ss_dssp TCEEEEEEEECCSSSCCCEEEEEEEEGGGC
T ss_pred cCEEEEEEEECCCCCCCceeEEEEEcchhc
Confidence 56899999986542 338999999999986
No 16
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=72.82 E-value=5.5 Score=37.56 Aligned_cols=76 Identities=14% Similarity=0.262 Sum_probs=45.7
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccccccccee-----ecccccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKETLS-----VNAPMNSKR 144 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~gii~e~~s-----i~~p~n~kr 144 (1100)
=.|||.|.+.|. . ....|.|.+|+-.+- +-.+||.+.|+|+++-.-..... .-.||.-+
T Consensus 59 P~Wne~f~f~v~------~--------~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~- 123 (176)
T 3m7f_B 59 PKWNEEILFRVL------P--------QRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPR- 123 (176)
T ss_dssp CEEEEEEEEEEC------T--------TTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCS-
T ss_pred CcccceEEEEEc------C--------CCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEcccc-
Confidence 469999988764 1 114799999986443 33899999999998754332211 34555432
Q ss_pred ccccCCCceEEEEeeec
Q 001323 145 SFRNTAQPVLFIKIQPA 161 (1100)
Q Consensus 145 s~rn~~qp~lyv~IqP~ 161 (1100)
.-+....-.|.|+|.=+
T Consensus 124 ~~~~~~~G~l~l~l~~~ 140 (176)
T 3m7f_B 124 SHKSRVKGYLRLKMTYL 140 (176)
T ss_dssp STTCCCCSEEEEEEEEC
T ss_pred CCCCccCEEEEEEEEEE
Confidence 23344566777766543
No 17
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=72.25 E-value=2.2 Score=38.90 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=34.4
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~ 127 (1100)
=.|||.|.+++.. +..+...|.|.||+-.+- |-.+||.+.|+|+++
T Consensus 72 P~wnE~f~f~v~~-----------~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l 118 (138)
T 1wfm_A 72 TTWEEGLVLPLAE-----------EELPTATLTLTLRTCDRFSRHSVAGELRLGLDGT 118 (138)
T ss_dssp EECSSCEEEECCT-----------TSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSS
T ss_pred CcCCceEEEEecH-----------HHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccc
Confidence 4799999987531 123456799999987442 338999999999997
No 18
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=71.94 E-value=4.5 Score=36.09 Aligned_cols=72 Identities=14% Similarity=0.198 Sum_probs=45.6
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccccccccceeeccccccccccccC
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNT 149 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~gii~e~~si~~p~n~krs~rn~ 149 (1100)
=.|||.|.+++. + ....|.|.+|+-.+- |-.+||.+.|+|.++---.+......++. +. ..
T Consensus 56 P~Wne~f~f~v~---~-----------~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~--~~--~~ 117 (136)
T 1wfj_A 56 PEWNETFIFTVS---E-----------GTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV--KD--EE 117 (136)
T ss_dssp CEEEEEEEEEEE---S-----------SCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE--ET--TE
T ss_pred CccCcEEEEEEC---C-----------CCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee--cC--Cc
Confidence 479999999876 1 234799999987542 33899999999998721112233445554 21 23
Q ss_pred CCceEEEEeee
Q 001323 150 AQPVLFIKIQP 160 (1100)
Q Consensus 150 ~qp~lyv~IqP 160 (1100)
.+-.|.|.|+=
T Consensus 118 ~~G~i~l~l~~ 128 (136)
T 1wfj_A 118 YKGEIWVALSF 128 (136)
T ss_dssp EEEEEEEEEEE
T ss_pred cCEEEEEEEEE
Confidence 34556666543
No 19
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.92 E-value=13 Score=33.33 Aligned_cols=88 Identities=16% Similarity=0.198 Sum_probs=50.8
Q ss_pred EEEEeeeecCCCCcccccccce-eEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchh
Q 001323 19 YQIHIQDIKPWPPSQSLRSLRS-VMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTF 97 (1100)
Q Consensus 19 y~IhiqeIkPWPpSqSlrS~rS-VllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f 97 (1100)
..|+|.+-+-.|+... ..... |.+... |. ...|.++--+ -.=.|||.|.+.+..... -
T Consensus 9 L~v~v~~a~~L~~~~~-g~~dpyv~v~~~-~~--~~kT~v~~~t-------~nP~wne~f~f~v~~~~~----------~ 67 (140)
T 2dmh_A 9 LRVIVESASNIPKTKF-GKPDPIVSVIFK-DE--KKKTKKVDNE-------LNPVWNEILEFDLRGIPL----------D 67 (140)
T ss_dssp EEEEEEEEESCCCCSS-SCCCEEEEEECS-SC--EEECCCCCSC-------SSCEEEEEEEEECSSCCC----------C
T ss_pred EEEEEEEeeCCCCCCC-CCCCeEEEEEEC-CE--eEEeeeecCC-------CCCccCcEEEEEeccccc----------C
Confidence 4456666665555443 22222 334433 33 2555544222 134799999887632110 1
Q ss_pred cccceeeeecccccc-cccccceeeeccccc
Q 001323 98 LKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (1100)
Q Consensus 98 ~KN~LEfnlye~rrd-K~QlLGtA~inLAd~ 127 (1100)
....|.|.+|+-.+- +-.+||.+.|+|.++
T Consensus 68 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l 98 (140)
T 2dmh_A 68 FSSSLGIIVKDFETIGQNKLIGTATVALKDL 98 (140)
T ss_dssp TTCEEEEEEEETTCSSSCCCCEEEEEEGGGT
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHh
Confidence 246799999987543 338999999999986
No 20
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=70.04 E-value=1.6 Score=41.31 Aligned_cols=46 Identities=24% Similarity=0.403 Sum_probs=35.7
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~ 127 (1100)
=.|||.|.++|.. +..+...|+|.+|+-.+. |-.+||.+.|+|+++
T Consensus 94 P~wnE~F~f~v~~-----------~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l 140 (155)
T 2z0u_A 94 LVFNEVFWVSMSY-----------PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEV 140 (155)
T ss_dssp EEEEEEEEEECCH-----------HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTS
T ss_pred CccccEEEEEcCH-----------HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHc
Confidence 5799999988532 234667899999987543 338999999999987
No 21
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=67.55 E-value=9.1 Score=35.28 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=53.4
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCC--CCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001323 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDR--NSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~r-SVllqWENGd~--~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~ 96 (1100)
.|+|.+-+--|+.......- =|.+...++.+ ....|.++--++ .=.|||.|.+.|.. +.
T Consensus 28 ~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~ 89 (159)
T 1tjx_A 28 TVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTL-------NPYYNESFSFEVPF-----------EQ 89 (159)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCS-------SCEEEEEEEEECCG-----------GG
T ss_pred EEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCC-------CCcccceEEEEcCH-----------HH
Confidence 45666666666544321111 13444433221 244555443222 24799999887532 22
Q ss_pred hcccceeeeecccccc-cccccceeeecccccc
Q 001323 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 97 f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
++...|.|.||+-.+- +-.+||.+.|+|...|
T Consensus 90 l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~ 122 (159)
T 1tjx_A 90 IQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTG 122 (159)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred hCCcEEEEEEEECCCCCCCceEEEEEECCCCCC
Confidence 4556799999987542 3389999999999765
No 22
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=67.39 E-value=30 Score=30.74 Aligned_cols=91 Identities=25% Similarity=0.368 Sum_probs=52.8
Q ss_pred EEEeeeecCCCCcccccccce-eEEEeec--CCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001323 20 QIHIQDIKPWPPSQSLRSLRS-VMIQWQN--GDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~rS-VllqWEN--Gd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~ 96 (1100)
.|+|.+-+--|+.......-. |.+..-. +......|.++--++ .=.|||.|.+++.- .+.
T Consensus 24 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~-------nP~wne~f~f~~~~----------~~~ 86 (141)
T 1v27_A 24 IVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTL-------EPKWNQTFIYSPVH----------RRE 86 (141)
T ss_dssp EEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCS-------SCCCCCCCEECSCC----------TTG
T ss_pred EEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCC-------CCccccEEEEccCC----------HHH
Confidence 355666555555432211111 2333222 234455666554433 23699999887311 123
Q ss_pred hcccceeeeeccccccc---ccccceeeeccccc
Q 001323 97 FLKNCLEFNLYEPRRDK---TQLLATATIDLADY 127 (1100)
Q Consensus 97 f~KN~LEfnlye~rrdK---~QlLGtA~inLAd~ 127 (1100)
.....|.|.+|+-.+-. -.+||.+.|+|++.
T Consensus 87 ~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l 120 (141)
T 1v27_A 87 FRERMLEITLWDQARVREEESEFLGEILIELETA 120 (141)
T ss_dssp GGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGC
T ss_pred hcCCEEEEEEEECCCCcCCCCceEEEEEEEcccc
Confidence 45578999999876633 48999999999985
No 23
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=64.12 E-value=15 Score=33.28 Aligned_cols=46 Identities=20% Similarity=0.299 Sum_probs=34.3
Q ss_pred EEeecceeee-EEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccc
Q 001323 71 IEFNESFRLR-VTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (1100)
Q Consensus 71 ieFnEsFrL~-vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~ 127 (1100)
=.|||.|.++ +.. +..+...|.|.+|+-.+- +-++||.+.|+|+++
T Consensus 69 P~wnE~f~f~~v~~-----------~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l 116 (134)
T 2b3r_A 69 PTFNEMLVYSGYSK-----------ETLRQRELQLSVLSAESLRENFFLGGITLPLKDF 116 (134)
T ss_dssp CEEEEEEEEESCCH-----------HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGS
T ss_pred CCCccEEEECCcCH-----------HHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhc
Confidence 3699999887 532 234556899999987542 238999999999987
No 24
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=64.02 E-value=26 Score=31.87 Aligned_cols=89 Identities=18% Similarity=0.301 Sum_probs=51.2
Q ss_pred EEEeeeecCCCCcccccccce-eEEEeecCC--CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001323 20 QIHIQDIKPWPPSQSLRSLRS-VMIQWQNGD--RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~rS-VllqWENGd--~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~ 96 (1100)
.|+|.+-+--|+.......-. |.+...+.. .....|.++--++ .=.|||.|.+++.- .+
T Consensus 34 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~----------~~- 95 (149)
T 1a25_A 34 IVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSL-------NPEWNETFRFQLKE----------SD- 95 (149)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCS-------SCEEEEEEEEECCS----------GG-
T ss_pred EEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCC-------CCcCCcEEEEEecc----------cc-
Confidence 456666666665443221121 344443321 3344555443222 24799999887631 01
Q ss_pred hcccceeeeecccccc-cccccceeeeccccc
Q 001323 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (1100)
Q Consensus 97 f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~ 127 (1100)
....|.|.||+-.+- |-.+||.+.|+|+++
T Consensus 96 -~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 126 (149)
T 1a25_A 96 -KDRRLSVEIWDWDLTSRNDFMGSLSFGISEL 126 (149)
T ss_dssp -GGCEEEEEEEECCSSSCCEEEEEEEEEHHHH
T ss_pred -CCCEEEEEEEECCCCCCCCEEEEEEEEHHHh
Confidence 124699999987543 338999999999986
No 25
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=61.84 E-value=4.2 Score=37.09 Aligned_cols=47 Identities=17% Similarity=0.403 Sum_probs=34.4
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
=.|||.|.++|.. +..+...|.|.+|+-.+- +-.+||.+.|+|+++-
T Consensus 74 P~wne~f~f~v~~-----------~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~ 121 (148)
T 3fdw_A 74 PLYDETLRYEIPE-----------SLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWK 121 (148)
T ss_dssp CEEEEEEEEECCS-----------TTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHH
T ss_pred CcEeeEEEEEeCh-----------hHhCceEEEEEEEECCCCcCCcEEEEEEEEccccc
Confidence 4699999887421 224567799999986442 2389999999999873
No 26
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=60.14 E-value=5.3 Score=36.51 Aligned_cols=89 Identities=12% Similarity=0.218 Sum_probs=51.2
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCC--CCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001323 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRN--SGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~r-SVllqWENGd~~--SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~ 96 (1100)
.|+|.+-+-.|+.......- =|.+..-++.+. ...|.++--++ .=.|||.|.++|.. +.
T Consensus 33 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~ 94 (153)
T 1w15_A 33 TVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTP-------NAVFNELFVFDIPC-----------ES 94 (153)
T ss_dssp EEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCS-------SEEEEEEEEEECCS-----------SS
T ss_pred EEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCC-------CCeecceEEEECCH-----------HH
Confidence 56777777776644221111 144444333221 34555443222 36899999987531 12
Q ss_pred hcccceeeeecccccc-cccccceeeecccc
Q 001323 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLAD 126 (1100)
Q Consensus 97 f~KN~LEfnlye~rrd-K~QlLGtA~inLAd 126 (1100)
.+...|.|.||+-.+- +-.+||.+.|+|.+
T Consensus 95 l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 95 LEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp STTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred hCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 3457899999987542 33899999999988
No 27
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=59.54 E-value=3.3 Score=37.17 Aligned_cols=92 Identities=23% Similarity=0.317 Sum_probs=53.8
Q ss_pred EEEEeeeecCCCCcccccccc-eeEEEeecCCC-----------CCCCcccccCCCcccccCceEEeecceeee-EEEEe
Q 001323 19 YQIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDR-----------NSGSTKTVGPSLGSVIGEGKIEFNESFRLR-VTLLR 85 (1100)
Q Consensus 19 y~IhiqeIkPWPpSqSlrS~r-SVllqWENGd~-----------~SGsT~~V~PSl~s~vG~GkieFnEsFrL~-vtl~~ 85 (1100)
..|+|.+-+--|+.......- =|.+...++.. ....|.++--++ .=.|||.|.++ +..
T Consensus 20 L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~v~~-- 90 (142)
T 1rh8_A 20 LIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSL-------NPEWNQTVIYKSISM-- 90 (142)
T ss_dssp EEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHH-------SCEEEEEEEECSCCH--
T ss_pred EEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCC-------CCCCCCEEEECCcCH--
Confidence 356777766666644221111 14444444332 134454443211 24799999875 322
Q ss_pred ecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001323 86 DMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 86 e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
+......|.|.+|+-.+- +-.+||.+.|+|.++.
T Consensus 91 ---------~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~ 125 (142)
T 1rh8_A 91 ---------EQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTS 125 (142)
T ss_dssp ---------HHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCG
T ss_pred ---------HHccCCEEEEEEEECCCCCCCceEEEEEEeccccc
Confidence 223456899999987552 3389999999999864
No 28
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=58.37 E-value=19 Score=32.31 Aligned_cols=91 Identities=18% Similarity=0.240 Sum_probs=53.9
Q ss_pred EEEeeeecCCCCcccccccce-eEEEeecCC--CCCCCcccccCCCcccccCceEEeecceeee-EEEEeecccCCCCcc
Q 001323 20 QIHIQDIKPWPPSQSLRSLRS-VMIQWQNGD--RNSGSTKTVGPSLGSVIGEGKIEFNESFRLR-VTLLRDMNVKNKDAD 95 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~rS-VllqWENGd--~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~-vtl~~e~s~kg~~~~ 95 (1100)
.|+|.+-+-.|+.......-. |.+..-++. .....|+++--++ .-.|||.|.++ +. .+
T Consensus 32 ~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~~~-----------~~ 93 (142)
T 2chd_A 32 QCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTR-------NPVWNETLQYHGIT-----------EE 93 (142)
T ss_dssp EEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCS-------SCEEEEEEEEESCC-----------HH
T ss_pred EEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCC-------CCcCcCEEEEcccC-----------HH
Confidence 567777777766443221121 444444322 2344555443222 25799998876 21 12
Q ss_pred hhcccceeeeecccccc-cccccceeeecccccc
Q 001323 96 TFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 96 ~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
..+...|.|.||+-.+- +-.+||.+.|+|.++.
T Consensus 94 ~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~ 127 (142)
T 2chd_A 94 DMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLK 127 (142)
T ss_dssp HHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCC
T ss_pred HccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcC
Confidence 34456899999987542 2389999999999863
No 29
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=57.66 E-value=11 Score=36.30 Aligned_cols=65 Identities=20% Similarity=0.345 Sum_probs=43.5
Q ss_pred EeecceeeeEEEEeecccCCCCcchhcccceeeeeccccc-ccccccceeeecccccccc---ccceeeccccccccccc
Q 001323 72 EFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRR-DKTQLLATATIDLADYGIV---KETLSVNAPMNSKRSFR 147 (1100)
Q Consensus 72 eFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rr-dK~QlLGtA~inLAd~gii---~e~~si~~p~n~krs~r 147 (1100)
.|||.|.++|. + ...|+|.+|+-.+ .+-.+||.+.|+|.++--- .+....-+||.
T Consensus 86 ~WNE~F~f~v~---~------------~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------ 144 (157)
T 2fk9_A 86 TYNEEFCANVT---D------------GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------ 144 (157)
T ss_dssp EEEEEEEEEEE---E------------ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------
T ss_pred ccCcEEEEEcC---C------------CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------
Confidence 79999999864 1 1369999998533 2238999999999985211 12334445552
Q ss_pred cCCCceEEEEee
Q 001323 148 NTAQPVLFIKIQ 159 (1100)
Q Consensus 148 n~~qp~lyv~Iq 159 (1100)
.+-.|+|+|+
T Consensus 145 --~~G~i~l~l~ 154 (157)
T 2fk9_A 145 --PEGKVFVVIT 154 (157)
T ss_dssp --SSCEEEEEEE
T ss_pred --CCcEEEEEEE
Confidence 2778888876
No 30
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.55 E-value=24 Score=31.68 Aligned_cols=92 Identities=16% Similarity=0.155 Sum_probs=53.0
Q ss_pred EEEeeeecCCCCcccccccceeEEEeecCCC--CCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchh
Q 001323 20 QIHIQDIKPWPPSQSLRSLRSVMIQWQNGDR--NSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTF 97 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~rSVllqWENGd~--~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f 97 (1100)
.|+|.+-+--|+.....+===|.+..-.+.+ ....|.++--++ .=.|||.|.++|.. +..
T Consensus 27 ~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l 88 (142)
T 2dmg_A 27 IVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTL-------NPVFDQSFDFSVSL-----------PEV 88 (142)
T ss_dssp EEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSCS-------SCEEEEEEEECCCH-----------HHH
T ss_pred EEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCCC-------CCCcCceEEEEecH-----------HHh
Confidence 3555555555543322111124455544333 444555543222 24799999887532 123
Q ss_pred cccceeeeecccccc-c-c-cccceeeeccccccc
Q 001323 98 LKNCLEFNLYEPRRD-K-T-QLLATATIDLADYGI 129 (1100)
Q Consensus 98 ~KN~LEfnlye~rrd-K-~-QlLGtA~inLAd~gi 129 (1100)
+...|.|.||+-.+- + - .+||.+.|+|++...
T Consensus 89 ~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~ 123 (142)
T 2dmg_A 89 QRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEEL 123 (142)
T ss_dssp HHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTT
T ss_pred CcCEEEEEEEECCCccccCCcEEEEEEEecccccc
Confidence 455899999987542 2 2 599999999998754
No 31
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=54.66 E-value=8.1 Score=34.00 Aligned_cols=93 Identities=25% Similarity=0.335 Sum_probs=51.6
Q ss_pred EEEEeeeecCCCCcccccccc-eeEEEeecC--CCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcc
Q 001323 19 YQIHIQDIKPWPPSQSLRSLR-SVMIQWQNG--DRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDAD 95 (1100)
Q Consensus 19 y~IhiqeIkPWPpSqSlrS~r-SVllqWENG--d~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~ 95 (1100)
..|+|.+-+--|+.......- =|.+..-.+ ......|.++--++ .=.|||.|.+++.- .+
T Consensus 20 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~~~----------~~ 82 (129)
T 2bwq_A 20 LIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTL-------EPKWNQTFIYSPVH----------RR 82 (129)
T ss_dssp EEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBS-------SCEEEEEEEECSCC----------GG
T ss_pred EEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCC-------CCccccEEEEccCC----------HH
Confidence 356666666666543221111 133333222 23444555443322 24699999887411 12
Q ss_pred hhcccceeeeeccccccc---ccccceeeecccccc
Q 001323 96 TFLKNCLEFNLYEPRRDK---TQLLATATIDLADYG 128 (1100)
Q Consensus 96 ~f~KN~LEfnlye~rrdK---~QlLGtA~inLAd~g 128 (1100)
......|.|.+|+-.+-. -.+||.+.|+|++.-
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~ 118 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETAL 118 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccC
Confidence 345568999999876532 479999999999853
No 32
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=53.23 E-value=5.3 Score=37.78 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=33.1
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeec-ccccc-cccccceeeecccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLY-EPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnly-e~rrd-K~QlLGtA~inLAd~g 128 (1100)
=.|||.|.+++.. +...|.|.|| +-.+- +-.+||.+.|+|+++-
T Consensus 81 P~wne~f~f~v~~--------------~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~ 126 (171)
T 2q3x_A 81 PLYQQSLVFDESP--------------QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELD 126 (171)
T ss_dssp CEEEEEEECSSCC--------------TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSC
T ss_pred CCCCcEEEEEecC--------------CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcc
Confidence 4799999988631 2367999999 65442 2389999999999873
No 33
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=52.85 E-value=9.1 Score=34.49 Aligned_cols=42 Identities=14% Similarity=0.270 Sum_probs=31.8
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeeccccc-ccccccceeeeccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRR-DKTQLLATATIDLADY 127 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rr-dK~QlLGtA~inLAd~ 127 (1100)
=.|||.|.+++.- . ..|+|.+|+-.+ .+-.+||.+.|+|.++
T Consensus 63 P~WnE~f~f~v~~---~------------~~L~~~V~d~d~~~~dd~iG~~~i~l~~l 105 (136)
T 1gmi_A 63 PAWHDEFVTDVCN---G------------RKIELAVFHDAPIGYDDFVANCTIQFEEL 105 (136)
T ss_dssp CEEEEEEEEEEEE---E------------CEEEEEEEECCSSSSCEEEEEEEEEHHHH
T ss_pred CccCCEEEEEecC---C------------CEEEEEEEeCCCCCCCCEEEEEEEEHHHh
Confidence 3799999998631 0 479999998643 2237999999999875
No 34
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=50.01 E-value=16 Score=35.09 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=46.0
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccccc----ccceeeccccccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIV----KETLSVNAPMNSKRS 145 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~gii----~e~~si~~p~n~krs 145 (1100)
=.|||.|.+.|. . ...|.|.||+-.+- +-.+||.+.|+|.++--- .+.+.+..++.-++.
T Consensus 81 P~Wne~f~f~v~------~---------~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~ 145 (173)
T 2nq3_A 81 PKWKQPLTVIVT------P---------VSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE 145 (173)
T ss_dssp CEEEEEEEEEEC------T---------TCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC
T ss_pred CeECCEEEEEeC------C---------CCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC
Confidence 479999999761 0 34699999987543 337999999999986221 122344555554421
Q ss_pred cccCCCceEEEEeeec
Q 001323 146 FRNTAQPVLFIKIQPA 161 (1100)
Q Consensus 146 ~rn~~qp~lyv~IqP~ 161 (1100)
....+-.|.|.+.-+
T Consensus 146 -~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 146 -PTETIGDLSICLDGL 160 (173)
T ss_dssp -TTSEEEEEEEEEESE
T ss_pred -CCcccEEEEEEEeee
Confidence 223355566655443
No 35
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=49.65 E-value=90 Score=31.69 Aligned_cols=89 Identities=24% Similarity=0.306 Sum_probs=51.7
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001323 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (1100)
Q Consensus 20 ~IhiqeIkPWPpSqSlrS~r-SVllqWENGd~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f~ 98 (1100)
.|+|.+-+--|+.......- =|.+....+......|.++--++ .=.|||.|.+++.. +..+
T Consensus 23 ~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l~ 84 (296)
T 1dqv_A 23 VVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTL-------NPIFNETFQFSVPL-----------AELA 84 (296)
T ss_dssp EEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCS-------SCEEEEEEEEECCG-----------GGGS
T ss_pred EEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCC-------CCcEeeEEEEEecH-----------HHhc
Confidence 56777766666543221111 14444433334455565543221 24799999987531 1234
Q ss_pred ccceeeeecccccc-cccccceeeec-ccc
Q 001323 99 KNCLEFNLYEPRRD-KTQLLATATID-LAD 126 (1100)
Q Consensus 99 KN~LEfnlye~rrd-K~QlLGtA~in-LAd 126 (1100)
...|.|.||+-.+- +-.+||.+.|+ |.+
T Consensus 85 ~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~ 114 (296)
T 1dqv_A 85 QRKLHFSVYDFDRFSRHDLIGQVVLDNLLE 114 (296)
T ss_dssp SCCCEEEEEECCSSSCCCEEEEEECCCTTG
T ss_pred CCEEEEEEEEcCCCCCCceEEEEEeccccc
Confidence 45799999987542 33899999995 443
No 36
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=48.76 E-value=38 Score=29.94 Aligned_cols=75 Identities=17% Similarity=0.299 Sum_probs=44.8
Q ss_pred CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001323 50 RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 50 ~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
.....|.++--++ .=.|||.|.+++.. . + ....|.|.+|+-.+- +-.+||.+.|+|++.-
T Consensus 52 ~~~~kT~~~~~t~-------nP~wne~f~f~~~~-------~---~--~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~ 112 (137)
T 3rdl_A 52 ESKQKTKTIRSTL-------NPQWNESFTFKLKP-------S---D--KDRRLSVEIWDWDRTTRNDFMGSLSFGVSELM 112 (137)
T ss_dssp CCCEECCCCCSCS-------SCEEEEEEEEECCG-------G---G--GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHH
T ss_pred CeeecCceEcCCC-------CCCcccEEEEEcCc-------h---h--cCCEEEEEEEECCCCCCCceEEEEEEeHHHhc
Confidence 3445555554332 24699999887541 0 1 123699999986442 3389999999999872
Q ss_pred ccccceeeccccccccc
Q 001323 129 IVKETLSVNAPMNSKRS 145 (1100)
Q Consensus 129 ii~e~~si~~p~n~krs 145 (1100)
......-.+|.-+++
T Consensus 113 --~~~~~~W~~L~~~~~ 127 (137)
T 3rdl_A 113 --KMPASGWYKLLNQEE 127 (137)
T ss_dssp --HSCEEEEEECBCHHH
T ss_pred --cCccCceEECcCccc
Confidence 222444445544443
No 37
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=46.58 E-value=13 Score=36.58 Aligned_cols=121 Identities=17% Similarity=0.243 Sum_probs=68.8
Q ss_pred eEEEEEEEeeeecCCCCcccccccceeEEEeecCCCCCCCcccccCCCcccc--cCceEEeecceeeeEEEEeecccCCC
Q 001323 15 IHVDYQIHIQDIKPWPPSQSLRSLRSVMIQWQNGDRNSGSTKTVGPSLGSVI--GEGKIEFNESFRLRVTLLRDMNVKNK 92 (1100)
Q Consensus 15 v~vdy~IhiqeIkPWPpSqSlrS~rSVllqWENGd~~SGsT~~V~PSl~s~v--G~GkieFnEsFrL~vtl~~e~s~kg~ 92 (1100)
.|+-..++|+..+-=|..- =| +-+|.+ .|....- -++ .+-...|||.|+.|+.= ..
T Consensus 19 ~~msL~V~l~~a~~Lpg~~-Dp-~akv~F---Rg~k~kT----------kvi~~~~~npvfnE~F~wpl~~----~l--- 76 (144)
T 3l9b_A 19 SHMALIVHLKTVSELRGRA-DR-IAKVTF---RGQSFYS----------RVLENCEDVADFDETFRWPVAS----SI--- 76 (144)
T ss_dssp CCEEEEEEEEEEESCCSCE-EE-EEEEEE---TTEEEEC----------CCEEEECSCEEEEEEEEEEESS----CC---
T ss_pred CcEEEEEEEEEecCCCCCC-CC-eEEEEE---eccceee----------EEeccCCCCceEcceEEecCCC----CC---
Confidence 4677777777777766411 11 112222 3332222 233 24558899999998752 11
Q ss_pred Ccchhcccceeeeeccccc-ccccccceeeeccccccccccceeeccccccccccccCCCceEEEEeeecc
Q 001323 93 DADTFLKNCLEFNLYEPRR-DKTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNTAQPVLFIKIQPAE 162 (1100)
Q Consensus 93 ~~~~f~KN~LEfnlye~rr-dK~QlLGtA~inLAd~gii~e~~si~~p~n~krs~rn~~qp~lyv~IqP~~ 162 (1100)
=.--+|++-||+-.| -+-.+||+++|-|-+.-.- ..+.++.||--.+.-.-.++-.|=|.-||.+
T Consensus 77 ----d~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~-~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 77 ----DRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEE-NRVEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp ----CTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHH-SEEEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred ----CCCCEEEEEEEECccccCCCEEEEEEEEhHHhccC-CeEEEeecccCCCCCccccEEEEEEEecCCC
Confidence 122479999998755 2337999999999775332 3555666655444333333444455556654
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=44.60 E-value=6.3 Score=40.11 Aligned_cols=48 Identities=8% Similarity=0.097 Sum_probs=36.7
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeeccccccc-ccccceeeeccccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRDK-TQLLATATIDLADYGI 129 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrdK-~QlLGtA~inLAd~gi 129 (1100)
=.|||.|.++|.. +.++...|.|.+|+-.+.. -++||.+.|+|.+.|.
T Consensus 202 P~wne~f~f~v~~-----------~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 202 PTYNEALVFDVAP-----------ESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CEEEECCCCCCCS-----------GGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred CeECceEEEEcCH-----------HHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc
Confidence 4799999887532 2345568999999876643 3899999999998865
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=43.44 E-value=15 Score=33.78 Aligned_cols=43 Identities=12% Similarity=0.146 Sum_probs=31.8
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccccccccceeeeccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRDKTQLLATATIDLADY 127 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrdK~QlLGtA~inLAd~ 127 (1100)
=.|||.|.+.+. + . ...|.|.+|+-.-.+-.+||.+.|+|.+.
T Consensus 46 P~WnE~f~f~v~---~----~-------~~~L~~~V~D~d~~~dd~iG~~~i~l~~l 88 (131)
T 2cjt_A 46 PSWEQDFMFEIN---R----L-------DLGLTVEVWNKGLIWDTMVGTVWIPLRTI 88 (131)
T ss_dssp CEEEEEEEEEEC---C----C-------SSEEEEEEEECCSSCEEEEEEEEEEGGGS
T ss_pred ceECCEEEEEEe---C----C-------CCeEEEEEEECCCCCCCeEEEEEEEHHHh
Confidence 589999999875 1 0 12499999986422238999999999874
No 40
>2lme_A Adhesin YADA; trimeric autotransporter, membrane protein, cell adhesion; NMR {Yersinia enterocolitica subsp}
Probab=42.62 E-value=25 Score=32.41 Aligned_cols=32 Identities=28% Similarity=0.474 Sum_probs=28.6
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 001323 564 AESKIQQLEHKINMLETELREAAAIEASLYSV 595 (1100)
Q Consensus 564 ~~~kieele~rie~LE~ELREaAAlEvsLYSV 595 (1100)
..+|+.+|..||++++.|+|-.+|.=+||=.+
T Consensus 14 ~~~~~~~l~~~i~~~~~~~~~g~A~a~A~a~l 45 (105)
T 2lme_A 14 GAHKFRQLDNRLDKLDTRVDKGLASSAALNSL 45 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 56999999999999999999999998888554
No 41
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=42.44 E-value=16 Score=36.46 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=34.9
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrd-K~QlLGtA~inLAd~g 128 (1100)
=.|||.|.+++.. +.++...|.|.+|+-.+- +-.+||.+.|+|...|
T Consensus 200 P~wne~f~f~v~~-----------~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~ 247 (284)
T 2r83_A 200 PYYNESFSFEVPF-----------EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTG 247 (284)
T ss_dssp CEEEEEEEEECCT-----------TTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCH
T ss_pred CEEceeEEEeCCH-----------HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCC
Confidence 4799998887521 235566899999987653 3389999999998644
No 42
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=41.24 E-value=59 Score=29.84 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=32.3
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeeccccc-cc-ccccceeeeccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRR-DK-TQLLATATIDLADY 127 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rr-dK-~QlLGtA~inLAd~ 127 (1100)
=.|||.|.+++.. ....+ .|.|.+|+-.+ .+ -.+||.+.|+|.++
T Consensus 76 P~wne~f~f~v~~-----------~~~~~-~L~i~V~d~d~~~~~d~~lG~~~i~l~~l 122 (153)
T 3fbk_A 76 PAFHEHFFFPVQE-----------EDDQK-RLLVTVWNRASQSRQSGLIGCMSFGVKSL 122 (153)
T ss_dssp CEEEEEEEEECCG-----------GGTTS-EEEEEEEECCSSGGGCEEEEEEEEEHHHH
T ss_pred CccccEEEEeccc-----------HHhCC-EEEEEEEeCCCCCCCCcEEEEEEEEHHHh
Confidence 4799999887531 11223 49999998755 23 37999999999984
No 43
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=38.34 E-value=16 Score=35.25 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=32.0
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccccccccceeeeccccc
Q 001323 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRDKTQLLATATIDLADY 127 (1100)
Q Consensus 71 ieFnEsFrL~vtl~~e~s~kg~~~~~f~KN~LEfnlye~rrdK~QlLGtA~inLAd~ 127 (1100)
=+|||.|.+.|. + + ...|.|.+|+-.-.+-.+||++.|+|.++
T Consensus 55 P~WnE~f~f~v~---~----------~-~~~L~~~V~D~d~~~dd~iG~~~i~L~~l 97 (167)
T 2cjs_A 55 PSWEQDFMFEIN---R----------L-DLGLTVEVWNKGLIWDTMVGTVWIPLRTI 97 (167)
T ss_dssp CEEEEEEEEECC---C----------T-TSEEEEEEEECCSSCCEEEEEEEEEGGGS
T ss_pred CCCCCEEEEEee---C----------C-CCEEEEEEEECCCCCCceEEEEEEEHHHh
Confidence 589999998875 1 1 12499999986422238999999999984
No 44
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=26.32 E-value=57 Score=29.69 Aligned_cols=37 Identities=27% Similarity=0.364 Sum_probs=28.7
Q ss_pred ccCccccchhHHHhhHHHHHHHHHHHHHH---HHHHHHHH
Q 001323 553 KVYPRDTRSAVAESKIQQLEHKINMLETE---LREAAAIE 589 (1100)
Q Consensus 553 ~~~~e~~~~~~~~~kieele~rie~LE~E---LREaAAlE 589 (1100)
.-|...+.-.+|..+|.||+.|+..||.| ||..|.-|
T Consensus 9 Lm~AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~aspE 48 (78)
T 1dip_A 9 LMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPE 48 (78)
T ss_dssp GGGTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 34555566679999999999999999998 66666544
No 45
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=22.11 E-value=77 Score=23.84 Aligned_cols=23 Identities=39% Similarity=0.468 Sum_probs=15.0
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHH
Q 001323 564 AESKIQQLEHKINMLETELREAAAIE 589 (1100)
Q Consensus 564 ~~~kieele~rie~LE~ELREaAAlE 589 (1100)
+.||+..|+++|..||-| .||||
T Consensus 5 lkqknarlkqeiaaleye---iaale 27 (28)
T 3ra3_B 5 LKQKNARLKQEIAALEYE---IAALE 27 (28)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHC
T ss_pred HHHhhhHHHHHHHHHHHH---HHHhc
Confidence 566777777777777654 45655
No 46
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=21.03 E-value=2.8e+02 Score=32.15 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=70.2
Q ss_pred eEEEEEEEeeeecCCCCccc--ccccce-eEEEeecC---CCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecc
Q 001323 15 IHVDYQIHIQDIKPWPPSQS--LRSLRS-VMIQWQNG---DRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMN 88 (1100)
Q Consensus 15 v~vdy~IhiqeIkPWPpSqS--lrS~rS-VllqWENG---d~~SGsT~~V~PSl~s~vG~GkieFnEsFrL~vtl~~e~s 88 (1100)
....+.|+|.+-+-||+... -...-- |.++- .| |.....|+++-=+-- .=.|||.|.++|..
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l-~g~~~d~~~~kTkvi~~ng~------NP~WnE~f~F~v~~----- 562 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEI-HGVGRDTGSRQTAVITNNGF------NPRWDMEFEFEVTV----- 562 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEE-ESSGGGCEEEECCCCTTCSS------SCEEEEEEEEEESC-----
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEE-ecCCCCcceeecccccCCCC------CCccCceEEEEEec-----
Confidence 45567888888888887652 111111 22222 23 444566665542201 24689999887641
Q ss_pred cCCCCcchhcccceeeeeccccc-ccccccceeeeccccccccccceeeccccccccccccCCCceEEEEee
Q 001323 89 VKNKDADTFLKNCLEFNLYEPRR-DKTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNTAQPVLFIKIQ 159 (1100)
Q Consensus 89 ~kg~~~~~f~KN~LEfnlye~rr-dK~QlLGtA~inLAd~gii~e~~si~~p~n~krs~rn~~qp~lyv~Iq 159 (1100)
.+ -..|.|.||+-.+ .+-.+||.++|.|.+. ..+. -.+||.-++.-. ...+.|||+|+
T Consensus 563 -----~e---l~~L~~~V~D~D~~~~dd~iG~~~ipl~~L--~~G~--r~v~L~d~~g~~-~~~~~L~v~i~ 621 (624)
T 1djx_A 563 -----PD---LALVRFMVEDYDSSSKNDFIGQSTIPWNSL--KQGY--RHVHLLSKNGDQ-HPSATLFVKIS 621 (624)
T ss_dssp -----GG---GCEEEEEEEECCSSSCCEEEEEEEEEGGGB--CCEE--EEEEEECTTSCE-EEEEEEEEEEE
T ss_pred -----CC---CCEEEEEEEEcCCCCCCceeEEEEEEHHHc--CCCc--EEEeCCCCCcCC-CCceEEEEEEE
Confidence 01 1479999998743 2338999999999874 2221 246664443322 23577888886
No 47
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=20.41 E-value=46 Score=27.52 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=17.8
Q ss_pred HHhhHHHHHHHHHHHHHHHHHH
Q 001323 564 AESKIQQLEHKINMLETELREA 585 (1100)
Q Consensus 564 ~~~kieele~rie~LE~ELREa 585 (1100)
....+++||.+|+.||..|...
T Consensus 47 ~~~~~~~Le~ri~~Le~~l~~l 68 (72)
T 2er8_A 47 KRARNEAIEKRFKELTRTLTNL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 3478889999999999888754
Done!