Citrus Sinensis ID: 001330

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------110
MKLKLDPKRLCPKIVLRPLCFLIFLGFCAFGTLKIWLMTIKTAHEIKQEASGVLNNSFSEIETTARLLLPLNSSAFNLARSLSSYLNGTELSFDTIQTKVAPTLFLALSTIPHLSLVSYLGLDGLSFSYFNDGDQTLAVYSNSSFAANWYTQPVNRDTGMLYGNAIASIPIVSANASWFQEVINSTNGYSSLVTGLNKEEGSIFLHTFAMDGTGFISLGFPAKVVIDLFAALDFHGGDLHLAAADGQVIIQTKLQNTEMVIYNSTLLLQKLNDDDSPEGSIANHSCVSDKGNPTKFNMKIMGKKYIFYCSTLQIAGVQSVYVLAYDSNGLGSLVSRNNKLSLMLLVLMFIAGVISLGLFIILIAKAAKREMFLCAALIKQMNATEQAERKSMNKTFALAKASHDVRASLAAIIGLVELCHEDANPGTDLAENLGLIRTCSKDLLGILNSVMEMSKIEAGKMELVEEEFNLAQLLEEVVDMYYHVGIKKGVDVVLDPCDGSVLGSCHVRGDRVKLKQILCNLVSNSMKFTSEGHISVRAAVKKKSFKQDIIASNRNVISKCLSKLFFRNKEGFDDLDALHSVERNPNLLQFEFEVDDTGKGIPKDKQNSIFEEFVQVKETALGHQEGLGLGLGIVQSMVHLMKGEIAIADKEPGERGVCFRFNVLLTAVCERERPDTDEEDPRTHNDWPQTGLHQHFASFWGSAAKSEGSQMILFIAGEERRRVLKRYIENSLNIKVTIVKQEKNLHQELRKVKRKMDPSSIGYAEKPESSLVDSLTMSASSSSDTGHHDVALDIKDDYDNVSPHSKKASSKCLSSFTLVVIDATAGSVSELVKILANFKRDVPSLSCKVVWIDNSVIRNAHSREYRLLPICDHVISRPFHGSRLIEVLKLLPECKGASQRNFPKLKMEASSQELQHCTDPNPLNKLKSFGAEAGASISSHCSSLQQVAAQSDGKCSEKPLNGKKFLVVEDDAIVLKVTSAVLGKLGAKFEVCRNGKEAFDHVCKILSDLRKEGKALPYDYIMMDCEMPVMNGWEATRLIRKEEEQYDVHIPIIALTAHAMAGVASKIVDAGMDFHLTKPLQKDKLLDVVKSIDETMEKQ
ccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccEEEEECccccEEEECccccCEEEEEcccccccEEEEEcccccccccccccccccccccccHHHHHHHHccccccEEEEEccccccCEEEEEECccccEEEEccccHHHHHHHHHHccccccEEEEEcccccEEEEEcccccccEEEccHHHHHccccccccccccccccccccccccccccEEEccEEEEEEcccccccccEEEEEEEECcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccccccCEEcccHHHHHHHHHHHHcccccccccEEEEEEEEEEccccHHHHcccccccccccccccccccccccccccccccccccccCEEEEEEECcccccccccHHcccccccccccccccccccccHHHHHHHHHHHHcccEEEEEECcccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHHccEEEEEEccHHHHHHHHHHHHcccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccEEEccccccHHHHHHHHHcccccccccccEEEECcccccccHHHHHHHccccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccHHHHcccccccccccccccEEEEECccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHHHcccccccccEEEEccccccccHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHcc
********RLCPKIVLRPLCFLIFLGFCAFGTLKIWLMTIKTAHEIKQEASGVLNNSFSEIETTARLLLPLNSSAFNLARSLSSYLNGTELSFDTIQTKVAPTLFLALSTIPHLSLVSYLGLDGLSFSYFNDGDQTLAVYSNSSFAANWYTQPVNRDTGMLYGNAIASIPIVSANASWFQEVINSTNGYSSLVTGLNKEEGSIFLHTFAMDGTGFISLGFPAKVVIDLFAALDFHGGDLHLAAADGQVIIQTKLQNTEMVIYNSTLLLQKL************HSCVSDKGNPTKFNMKIMGKKYIFYCSTLQIAGVQSVYVLAYDSNGLGSLVSRNNKLSLMLLVLMFIAGVISLGLFIILIAKAAKREMFLCAALIKQM*****AERKSMNKTFALAKASHDVRASLAAIIGLVELCHEDANPGTDLAENLGLIRTCSKDLLGILNSVMEMSKIEAGKMELVEEEFNLAQLLEEVVDMYYHVGIKKGVDVVLDPCDGSVLGSCHVRGDRVKLKQILCNLVSNSMKFTSEGHISVRAAVKKKSFKQDIIASNRNVISKCLSKLFFRNKEG**********ERNPNLLQFEFEVDDTGKGIPKDKQNSIFEEFVQVKETALGHQEGLGLGLGIVQSMVHLMKGEIAIADKEPGERGVCFRFNVLLTAV*************************************SEGSQMILFIAGEERRRVLKRYIENSLNIKVTIVKQEKNLHQELRKVKRKMDPSSIGYAEKPESSLVDS*************HDVALDIKDDYDNVSPHSKK****CLSSFTLVVIDATAGSVSELVKILANFKRDVPSLSCKVVWIDNSVIRNAHSREYRLLPICDHVISRPFHGSRLIEVLKLLPECK*************************NPLNKLKSFG****************************PLNGKKFLVVEDDAIVLKVTSAVLGKLGAKFEVCRNGKEAFDHVCKILSDLRKEGKALPYDYIMMDCEMPVMNGWEATRLIRKEEEQYDVHIPIIALTAHAMAGVASKIVDAGMDFHLTKPLQKDKLLDVVKS*D******
xxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MKLKLDPKRLCPKIVLRPLCFLIFLGFCAFGTLKIWLMTIKTAHEIKQEASGVLNNSFSEIETTARLLLPLNSSAFNLARSLSSYLNGTELSFDTIQTKVAPTLFLALSTIPHLSLVSYLGLDGLSFSYFNDGDQTLAVYSNSSFAANWYTQPVNRDTGMLYGNAIASIPIVSANASWFQEVINSTNGYSSLVTGLNKEEGSIFLHTFAMDGTGFISLGFPAKVVIDLFAALDFHGGDLHLAAADGQVIIQTKLQNTEMVIYNSTLLLQKLNDDDSPEGSIANHSCVSDKGNPTKFNMKIMGKKYIFYCSTLQIAGVQSVYVLAYDSNGLGSLVSRNNKLSLMLLVLMFIAGVISLGLFIILIAKAAKREMFLCAALIKQMNATEQAERKSMNKTFALAKASHDVRASLAAIIGLVELCHEDANPGTDLAENLGLIRTCSKDLLGILNSVMEMSKIEAGKMELVEEEFNLAQLLEEVVDMYYHVGIKKGVDVVLDPCDGSVLGSCHVRGDRVKLKQILCNLVSNSMKFTSEGHISVRAAVKKKSFKQDIIASNRNVISKCLSKLFFRNKEGFDDLDALHSVERNPNLLQFEFEVDDTGKGIPKDKQNSIFEEFVQVKETALGHQEGLGLGLGIVQSMVHLMKGEIAIADKEPGERGVCFRFNVLLTAVCERERPDTDEEDPRTHNDWPQTGLHQHFASFWGSAAKSEGSQMILFIAGEERRRVLKRYIENSLNIKVTIVKQEKNLHQELRKVKRKMDPSSIGYAEKPESSLVDSLTMSASSSSDTGHHDVALDIKDDYDNVSPHSKKASSKCLSSFTLVVIDATAGSVSELVKILANFKRDVPSLSCKVVWIDNSVIRNAHSREYRLLPICDHVISRPFHGSRLIEVLKLLPECKGASQRNFPKLKMEASSQELQHCTDPNPLNKLKSFGAEAGASISSHCSSLQQVAAQSDGKCSEKPLNGKKFLVVEDDAIVLKVTSAVLGKLGAKFEVCRNGKEAFDHVCKILSDLRKEGKALPYDYIMMDCEMPVMNGWEATRLIRKEEEQYDVHIPIIALTAHAMAGVASKIVDAGMDFHLTKPLQKDKLLDVVKSIDETMEKQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Histidine kinase CKI1 Essential protein. Functions as a histidine kinase and transmits the stress signal to a downstream MAPK cascade. This protein undergoes an ATP-dependent autophosphorylation at a conserved histidine residue in the kinase core, and a phosphoryl group is then transferred to a conserved aspartate residue in the receiver domain. Required for the development of megagametophyte in female gametophyte (embryo sac) independently of cytokinin. Contributes to vascular bundle formation and secondary growth in a cytokinin-independent manner, probably by promoting the maintenance of mitotic activity and/or identity of procambial cells. Seems to influence and promote the cytokinin signaling pathway.probableO22267

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.7.-.-Transferring phosphorous-containing groups.probable
2.7.13.-Protein-histidine kinases.probable
2.7.13.3Histidine kinase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4EW8, chain A
Confidence level:very confident
Coverage over the Query: 387-543,589-667
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Template: 3MM4, chain A
Confidence level:very confident
Coverage over the Query: 962-1093
View the alignment between query and template
View the model in PyMOL
Template: 1W25, chain A
Confidence level:very confident
Coverage over the Query: 709-752,815-929,946-1003,1015-1096
View the alignment between query and template
View the model in PyMOL
Template: 3LIB, chain A
Confidence level:probable
Coverage over the Query: 99-251
View the alignment between query and template
View the model in PyMOL
Template: 1QZV, chain F
Confidence level:probable
Coverage over the Query: 763-780
View the alignment between query and template
View the model in PyMOL