Query 001331
Match_columns 1099
No_of_seqs 510 out of 3557
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 22:39:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001331.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001331hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cmm_A Ubiquitin-activating en 100.0 7E-215 2E-219 2011.1 84.8 998 90-1098 3-1015(1015)
2 1y8q_B Anthracycline-, ubiquit 100.0 1E-101 4E-106 931.5 29.0 516 497-1083 3-534 (640)
3 1z7l_A Ubiquitin-activating en 100.0 1.1E-69 3.9E-74 595.4 22.7 268 667-941 9-276 (276)
4 1tt5_A APPBP1, amyloid protein 100.0 7.1E-64 2.4E-68 599.9 14.6 381 91-477 8-525 (531)
5 1y8q_A Ubiquitin-like 1 activa 100.0 8.5E-60 2.9E-64 539.2 27.7 320 89-478 11-338 (346)
6 1tt5_B Ubiquitin-activating en 100.0 1.3E-56 4.6E-61 524.4 23.5 359 492-1059 7-407 (434)
7 2nvu_B Maltose binding protein 100.0 2.4E-52 8.3E-57 528.5 27.7 357 494-1059 393-778 (805)
8 1y8q_A Ubiquitin-like 1 activa 100.0 2E-35 7E-40 337.7 19.0 165 491-666 16-180 (346)
9 1tt5_A APPBP1, amyloid protein 100.0 2.9E-35 1E-39 352.5 10.0 190 492-691 13-202 (531)
10 3h8v_A Ubiquitin-like modifier 100.0 8.6E-34 2.9E-38 315.1 13.3 164 492-664 14-193 (292)
11 1tt5_B Ubiquitin-activating en 100.0 1.5E-32 5.3E-37 321.2 23.9 282 95-477 7-322 (434)
12 1zud_1 Adenylyltransferase THI 100.0 1.5E-32 5.3E-37 300.9 13.4 165 491-664 6-173 (251)
13 2nvu_B Maltose binding protein 100.0 2.6E-30 9E-35 327.1 26.2 276 101-477 397-693 (805)
14 1jw9_B Molybdopterin biosynthe 100.0 2.9E-31 9.8E-36 290.5 12.9 164 492-664 10-176 (249)
15 3h5n_A MCCB protein; ubiquitin 100.0 1.8E-30 6E-35 297.7 17.2 166 491-665 92-265 (353)
16 1zud_1 Adenylyltransferase THI 100.0 2.9E-29 9.8E-34 274.9 18.2 152 91-244 3-160 (251)
17 1y8q_B Anthracycline-, ubiquit 100.0 4.8E-28 1.7E-32 292.3 29.4 147 100-248 3-154 (640)
18 3rui_A Ubiquitin-like modifier 100.0 6.7E-30 2.3E-34 288.1 12.2 158 499-664 22-199 (340)
19 3cmm_A Ubiquitin-activating en 100.0 6.2E-30 2.1E-34 324.3 11.3 184 491-692 7-193 (1015)
20 1jw9_B Molybdopterin biosynthe 100.0 1.1E-27 3.9E-32 262.0 18.4 153 90-244 5-163 (249)
21 3vh1_A Ubiquitin-like modifier 99.9 2.8E-28 9.5E-33 291.0 14.3 165 492-664 301-492 (598)
22 3h8v_A Ubiquitin-like modifier 99.9 7.9E-28 2.7E-32 267.3 16.6 149 95-246 14-183 (292)
23 4gsl_A Ubiquitin-like modifier 99.9 1.8E-28 6.3E-33 292.4 12.3 160 499-664 314-491 (615)
24 3h5n_A MCCB protein; ubiquitin 99.9 1.4E-26 4.7E-31 265.5 16.5 151 91-243 89-250 (353)
25 3rui_A Ubiquitin-like modifier 99.9 1.4E-24 5E-29 244.7 15.6 150 95-247 15-183 (340)
26 3vh1_A Ubiquitin-like modifier 99.9 1.8E-24 6E-29 258.4 15.8 154 90-246 296-475 (598)
27 2v31_A Ubiquitin-activating en 99.9 6E-25 2.1E-29 208.2 5.9 111 245-356 1-111 (112)
28 4gsl_A Ubiquitin-like modifier 99.9 8.4E-24 2.9E-28 252.4 15.4 144 102-248 314-476 (615)
29 1z7l_A Ubiquitin-activating en 98.3 9.5E-07 3.3E-11 97.0 9.0 55 762-825 207-263 (276)
30 3dfz_A SIRC, precorrin-2 dehyd 97.2 0.00077 2.6E-08 71.9 9.1 96 111-235 28-123 (223)
31 1y8x_B Ubiquitin-activating en 97.0 0.00024 8.1E-09 65.7 2.6 52 1008-1059 9-71 (98)
32 3jyo_A Quinate/shikimate dehyd 96.9 0.0012 4.1E-08 73.1 7.1 79 508-618 124-202 (283)
33 3jyo_A Quinate/shikimate dehyd 96.8 0.0018 6.2E-08 71.6 7.9 80 111-209 124-203 (283)
34 3dfz_A SIRC, precorrin-2 dehyd 96.8 0.0018 6.1E-08 69.0 7.3 92 508-639 28-119 (223)
35 3ic5_A Putative saccharopine d 96.8 0.0027 9.2E-08 59.3 7.6 96 511-642 5-100 (118)
36 1kyq_A Met8P, siroheme biosynt 96.7 0.0055 1.9E-07 67.3 10.5 118 111-238 10-145 (274)
37 1pjq_A CYSG, siroheme synthase 96.6 0.011 3.7E-07 69.8 12.5 100 111-238 9-108 (457)
38 3llv_A Exopolyphosphatase-rela 96.2 0.043 1.5E-06 53.3 12.5 93 112-234 4-102 (141)
39 3ic5_A Putative saccharopine d 96.1 0.023 8E-07 52.7 9.9 89 114-232 5-98 (118)
40 2g1u_A Hypothetical protein TM 95.9 0.044 1.5E-06 54.3 11.4 103 109-235 14-118 (155)
41 3llv_A Exopolyphosphatase-rela 95.9 0.023 8E-07 55.1 8.9 93 510-637 5-97 (141)
42 2hmt_A YUAA protein; RCK, KTN, 95.8 0.023 8E-07 54.7 8.6 88 110-225 2-96 (144)
43 2g1u_A Hypothetical protein TM 95.7 0.027 9.3E-07 55.9 8.7 94 506-633 14-107 (155)
44 3t4e_A Quinate/shikimate dehyd 95.7 0.023 8E-07 63.5 8.9 80 112-208 146-228 (312)
45 3tnl_A Shikimate dehydrogenase 95.6 0.029 1E-06 62.8 9.4 80 112-208 152-234 (315)
46 3tum_A Shikimate dehydrogenase 95.5 0.03 1E-06 61.3 9.0 74 112-209 123-196 (269)
47 2hmt_A YUAA protein; RCK, KTN, 95.4 0.024 8.3E-07 54.6 7.0 37 508-550 3-39 (144)
48 1kyq_A Met8P, siroheme biosynt 95.4 0.016 5.3E-07 63.7 6.0 110 508-639 10-138 (274)
49 3e8x_A Putative NAD-dependent 95.2 0.028 9.5E-07 59.4 7.4 38 506-549 16-54 (236)
50 1id1_A Putative potassium chan 95.2 0.02 6.9E-07 56.6 5.9 96 112-233 1-103 (153)
51 3tnl_A Shikimate dehydrogenase 95.2 0.031 1E-06 62.7 7.7 83 509-618 152-234 (315)
52 4ina_A Saccharopine dehydrogen 95.1 0.04 1.4E-06 63.9 8.9 103 512-641 2-106 (405)
53 2ph5_A Homospermidine synthase 95.0 0.047 1.6E-06 64.1 8.9 102 511-644 13-116 (480)
54 3tum_A Shikimate dehydrogenase 95.0 0.041 1.4E-06 60.2 7.9 73 509-618 123-195 (269)
55 1pjq_A CYSG, siroheme synthase 94.9 0.04 1.4E-06 64.9 8.2 92 509-639 10-101 (457)
56 3abi_A Putative uncharacterize 94.9 0.039 1.3E-06 63.0 7.7 94 510-642 15-108 (365)
57 1lss_A TRK system potassium up 94.8 0.027 9.3E-07 54.0 5.4 89 512-634 5-93 (140)
58 1id1_A Putative potassium chan 94.8 0.063 2.1E-06 53.0 8.1 94 510-634 2-95 (153)
59 3fwz_A Inner membrane protein 94.8 0.18 6.3E-06 48.9 11.3 90 114-231 7-102 (140)
60 1lss_A TRK system potassium up 94.7 0.15 5.1E-06 48.7 10.5 84 115-225 5-94 (140)
61 3pwz_A Shikimate dehydrogenase 94.6 0.048 1.6E-06 59.8 7.3 72 112-209 118-190 (272)
62 3c85_A Putative glutathione-re 94.6 0.062 2.1E-06 54.6 7.8 87 112-226 37-131 (183)
63 3t4e_A Quinate/shikimate dehyd 94.5 0.067 2.3E-06 59.8 8.2 83 509-618 146-228 (312)
64 3o8q_A Shikimate 5-dehydrogena 94.5 0.069 2.4E-06 58.8 8.2 73 112-209 124-196 (281)
65 3oj0_A Glutr, glutamyl-tRNA re 94.4 0.023 7.9E-07 55.7 3.8 40 504-549 14-53 (144)
66 3abi_A Putative uncharacterize 94.3 0.024 8.2E-07 64.7 4.2 88 113-233 15-107 (365)
67 3qsg_A NAD-binding phosphogluc 94.2 0.13 4.6E-06 57.2 9.9 35 113-147 23-57 (312)
68 3gvi_A Malate dehydrogenase; N 94.1 0.24 8.3E-06 55.6 11.7 77 111-209 4-84 (324)
69 3oj0_A Glutr, glutamyl-tRNA re 94.0 0.047 1.6E-06 53.4 5.0 71 113-210 20-90 (144)
70 3l4b_C TRKA K+ channel protien 93.9 0.081 2.8E-06 55.5 6.9 88 512-633 1-88 (218)
71 4ina_A Saccharopine dehydrogen 93.9 0.16 5.3E-06 58.9 9.9 95 115-232 2-105 (405)
72 3pwz_A Shikimate dehydrogenase 93.9 0.09 3.1E-06 57.6 7.4 73 509-619 118-190 (272)
73 3o8q_A Shikimate 5-dehydrogena 93.7 0.07 2.4E-06 58.8 6.3 73 509-619 124-196 (281)
74 3l4b_C TRKA K+ channel protien 93.7 0.19 6.3E-06 52.7 9.2 92 116-235 2-99 (218)
75 3h2s_A Putative NADH-flavin re 93.6 0.11 3.9E-06 53.8 7.4 94 513-644 2-106 (224)
76 2egg_A AROE, shikimate 5-dehyd 93.5 0.052 1.8E-06 60.2 4.8 36 112-147 139-174 (297)
77 3dqp_A Oxidoreductase YLBE; al 93.5 0.18 6E-06 52.5 8.6 94 513-643 2-106 (219)
78 1hyh_A L-hicdh, L-2-hydroxyiso 93.4 0.45 1.5E-05 52.8 12.3 74 115-211 2-80 (309)
79 3gpi_A NAD-dependent epimerase 93.4 0.18 6.2E-06 54.6 8.9 98 511-648 3-114 (286)
80 3p7m_A Malate dehydrogenase; p 93.4 0.28 9.7E-06 54.9 10.6 75 112-208 3-81 (321)
81 2z2v_A Hypothetical protein PH 93.3 0.13 4.4E-06 58.8 7.7 95 510-643 15-109 (365)
82 3e8x_A Putative NAD-dependent 93.2 0.24 8.1E-06 52.1 9.3 102 108-237 15-133 (236)
83 1p9l_A Dihydrodipicolinate red 93.2 0.11 3.7E-06 56.1 6.6 75 513-646 2-79 (245)
84 3don_A Shikimate dehydrogenase 93.1 0.14 4.9E-06 56.1 7.5 38 508-550 114-151 (277)
85 3dhn_A NAD-dependent epimerase 93.1 0.18 6.2E-06 52.5 8.0 97 512-645 5-114 (227)
86 2d4a_B Malate dehydrogenase; a 93.0 0.48 1.6E-05 52.7 11.7 71 116-208 1-75 (308)
87 1hdo_A Biliverdin IX beta redu 93.0 0.32 1.1E-05 49.4 9.6 34 114-148 3-37 (206)
88 2raf_A Putative dinucleotide-b 93.0 0.17 5.9E-06 52.9 7.6 36 508-549 16-51 (209)
89 3ruf_A WBGU; rossmann fold, UD 92.9 0.6 2E-05 52.0 12.5 109 110-240 21-156 (351)
90 2z2v_A Hypothetical protein PH 92.8 0.067 2.3E-06 61.2 4.4 87 113-232 15-106 (365)
91 1hdo_A Biliverdin IX beta redu 92.7 0.23 7.8E-06 50.6 8.0 34 511-550 3-37 (206)
92 3rku_A Oxidoreductase YMR226C; 92.7 0.35 1.2E-05 53.0 10.0 90 504-617 26-122 (287)
93 3slg_A PBGP3 protein; structur 92.7 0.081 2.8E-06 59.7 5.0 110 506-649 19-147 (372)
94 1npy_A Hypothetical shikimate 92.6 0.2 6.9E-06 54.8 7.7 67 113-209 118-184 (271)
95 3doj_A AT3G25530, dehydrogenas 92.5 0.14 4.9E-06 56.8 6.5 35 510-550 20-54 (310)
96 3d0o_A L-LDH 1, L-lactate dehy 92.4 0.41 1.4E-05 53.5 10.1 78 109-209 1-83 (317)
97 1ldn_A L-lactate dehydrogenase 92.3 0.57 1.9E-05 52.3 11.2 72 114-208 6-82 (316)
98 3l9w_A Glutathione-regulated p 92.3 0.35 1.2E-05 56.1 9.7 90 114-231 4-99 (413)
99 3don_A Shikimate dehydrogenase 92.3 0.27 9.2E-06 54.0 8.2 107 111-231 114-230 (277)
100 2hk9_A Shikimate dehydrogenase 92.1 0.36 1.2E-05 52.7 9.0 36 111-147 126-161 (275)
101 4id9_A Short-chain dehydrogena 92.1 0.17 5.8E-06 56.4 6.5 38 506-549 14-52 (347)
102 2aef_A Calcium-gated potassium 92.0 0.31 1.1E-05 51.5 8.2 92 113-235 8-105 (234)
103 4ezb_A Uncharacterized conserv 92.0 0.45 1.5E-05 53.1 9.8 83 114-219 24-106 (317)
104 3t4x_A Oxidoreductase, short c 92.0 0.23 7.8E-06 53.6 7.2 83 509-618 8-93 (267)
105 2h78_A Hibadh, 3-hydroxyisobut 92.0 0.43 1.5E-05 52.4 9.6 90 512-644 4-99 (302)
106 3dhn_A NAD-dependent epimerase 91.9 0.73 2.5E-05 47.8 10.9 94 115-239 5-116 (227)
107 4e12_A Diketoreductase; oxidor 91.9 0.17 6E-06 55.4 6.2 33 512-550 5-37 (283)
108 2ewd_A Lactate dehydrogenase,; 91.9 0.69 2.4E-05 51.5 11.2 33 115-147 5-37 (317)
109 3o38_A Short chain dehydrogena 91.9 0.26 8.9E-06 52.9 7.5 63 509-597 20-84 (266)
110 2axq_A Saccharopine dehydrogen 91.8 0.24 8.1E-06 58.5 7.6 100 508-642 20-119 (467)
111 3vku_A L-LDH, L-lactate dehydr 91.8 0.39 1.3E-05 53.9 9.0 75 112-209 7-85 (326)
112 4egb_A DTDP-glucose 4,6-dehydr 91.7 0.43 1.5E-05 53.0 9.3 106 112-240 22-154 (346)
113 3m2p_A UDP-N-acetylglucosamine 91.6 0.31 1.1E-05 53.5 7.8 33 511-549 2-35 (311)
114 1oju_A MDH, malate dehydrogena 91.5 0.61 2.1E-05 51.6 10.1 72 116-209 2-78 (294)
115 2b69_A UDP-glucuronate decarbo 91.5 0.97 3.3E-05 50.2 12.0 105 111-240 24-146 (343)
116 4e21_A 6-phosphogluconate dehy 91.5 0.34 1.2E-05 55.2 8.2 115 112-237 20-143 (358)
117 3qsg_A NAD-binding phosphogluc 91.5 0.34 1.2E-05 53.9 8.1 94 511-644 24-119 (312)
118 4aj2_A L-lactate dehydrogenase 91.5 0.32 1.1E-05 54.8 7.8 78 110-209 15-96 (331)
119 3rku_A Oxidoreductase YMR226C; 91.4 1 3.5E-05 49.3 11.8 69 107-194 26-97 (287)
120 3gpi_A NAD-dependent epimerase 91.4 0.48 1.7E-05 51.2 9.1 95 113-240 2-114 (286)
121 2raf_A Putative dinucleotide-b 91.4 0.53 1.8E-05 49.1 8.9 37 110-147 15-51 (209)
122 4g65_A TRK system potassium up 91.3 0.1 3.5E-06 61.6 3.7 94 511-638 3-97 (461)
123 2pzm_A Putative nucleotide sug 91.3 0.3 1E-05 54.2 7.5 36 508-549 17-53 (330)
124 1y1p_A ARII, aldehyde reductas 91.3 0.87 3E-05 50.2 11.1 81 510-619 10-92 (342)
125 3ew7_A LMO0794 protein; Q8Y8U8 91.0 0.63 2.1E-05 47.8 9.1 93 512-643 1-103 (221)
126 4id9_A Short-chain dehydrogena 91.0 0.47 1.6E-05 52.8 8.7 39 108-147 13-52 (347)
127 4ezb_A Uncharacterized conserv 91.0 0.59 2E-05 52.1 9.4 99 510-644 23-123 (317)
128 3pqe_A L-LDH, L-lactate dehydr 91.0 0.5 1.7E-05 53.1 8.8 75 114-209 5-82 (326)
129 2x0j_A Malate dehydrogenase; o 91.0 0.83 2.9E-05 50.5 10.4 72 116-209 2-78 (294)
130 3ruf_A WBGU; rossmann fold, UD 90.9 0.46 1.6E-05 52.9 8.5 115 506-648 20-156 (351)
131 3tl2_A Malate dehydrogenase; c 90.9 0.55 1.9E-05 52.4 9.0 77 112-208 6-86 (315)
132 3lf2_A Short chain oxidoreduct 90.9 0.46 1.6E-05 51.2 8.2 64 509-597 6-70 (265)
133 2bka_A CC3, TAT-interacting pr 90.8 0.74 2.5E-05 48.2 9.6 38 508-549 15-53 (242)
134 4e12_A Diketoreductase; oxidor 90.8 0.73 2.5E-05 50.3 9.8 33 114-147 4-36 (283)
135 2egg_A AROE, shikimate 5-dehyd 90.7 0.39 1.3E-05 53.2 7.5 36 509-549 139-174 (297)
136 3d1l_A Putative NADP oxidoredu 90.7 0.67 2.3E-05 49.9 9.3 80 112-219 8-87 (266)
137 4egb_A DTDP-glucose 4,6-dehydr 90.7 0.28 9.5E-06 54.6 6.4 37 508-548 21-58 (346)
138 2hjr_A Malate dehydrogenase; m 90.7 1.1 3.7E-05 50.3 11.2 74 113-208 13-90 (328)
139 3slg_A PBGP3 protein; structur 90.7 0.34 1.2E-05 54.6 7.2 106 107-241 17-147 (372)
140 3ldh_A Lactate dehydrogenase; 90.6 0.71 2.4E-05 51.9 9.5 73 114-208 21-97 (330)
141 1xg5_A ARPG836; short chain de 90.6 0.57 1.9E-05 50.7 8.6 65 508-597 29-94 (279)
142 1lu9_A Methylene tetrahydromet 90.5 0.31 1.1E-05 53.4 6.5 80 509-619 117-197 (287)
143 3ko8_A NAD-dependent epimerase 90.5 0.51 1.8E-05 51.5 8.2 32 512-549 1-33 (312)
144 3ius_A Uncharacterized conserv 90.5 0.41 1.4E-05 51.7 7.3 97 511-648 5-108 (286)
145 2v6b_A L-LDH, L-lactate dehydr 90.5 1.2 4E-05 49.4 11.2 71 116-209 2-76 (304)
146 3d1l_A Putative NADP oxidoredu 90.4 0.29 9.8E-06 52.8 6.0 93 509-642 8-102 (266)
147 3o26_A Salutaridine reductase; 90.3 0.45 1.6E-05 51.8 7.6 85 508-618 9-99 (311)
148 3gvi_A Malate dehydrogenase; N 90.3 0.47 1.6E-05 53.2 7.8 36 509-549 5-40 (324)
149 3vps_A TUNA, NAD-dependent epi 90.1 0.29 1E-05 53.5 5.9 37 508-550 4-41 (321)
150 1sb8_A WBPP; epimerase, 4-epim 90.1 0.46 1.6E-05 53.1 7.6 113 509-647 25-157 (352)
151 3tri_A Pyrroline-5-carboxylate 90.1 0.14 4.9E-06 56.1 3.3 82 511-631 3-84 (280)
152 4gbj_A 6-phosphogluconate dehy 90.1 1.4 4.7E-05 48.7 11.3 110 114-238 5-126 (297)
153 3fwz_A Inner membrane protein 90.0 0.21 7.2E-06 48.5 4.1 88 511-633 7-94 (140)
154 1ur5_A Malate dehydrogenase; o 90.0 1.5 5.2E-05 48.6 11.6 73 115-209 3-79 (309)
155 3nyw_A Putative oxidoreductase 90.0 0.39 1.3E-05 51.4 6.5 65 508-597 4-70 (250)
156 3hg7_A D-isomer specific 2-hyd 90.0 0.5 1.7E-05 53.0 7.6 37 508-550 137-173 (324)
157 4g65_A TRK system potassium up 89.9 0.46 1.6E-05 55.9 7.5 106 497-639 224-329 (461)
158 3qiv_A Short-chain dehydrogena 89.8 0.6 2.1E-05 49.6 7.8 63 508-597 6-69 (253)
159 1p77_A Shikimate 5-dehydrogena 89.8 0.58 2E-05 50.9 7.8 71 112-209 117-189 (272)
160 3ius_A Uncharacterized conserv 89.8 0.68 2.3E-05 49.9 8.4 97 114-240 5-108 (286)
161 3dqp_A Oxidoreductase YLBE; al 89.7 1.2 4.2E-05 46.0 10.0 91 116-238 2-109 (219)
162 3dtt_A NADP oxidoreductase; st 89.7 1 3.6E-05 48.0 9.6 39 109-148 14-52 (245)
163 3phh_A Shikimate dehydrogenase 89.7 0.25 8.6E-06 54.0 4.8 33 114-147 118-150 (269)
164 2ph5_A Homospermidine synthase 89.6 0.76 2.6E-05 53.9 9.0 91 114-232 13-112 (480)
165 3tri_A Pyrroline-5-carboxylate 89.6 0.82 2.8E-05 50.0 8.9 81 113-221 2-84 (280)
166 3pp8_A Glyoxylate/hydroxypyruv 89.6 0.45 1.6E-05 53.1 6.9 35 509-549 137-171 (315)
167 3l9w_A Glutathione-regulated p 89.5 0.18 6.3E-06 58.5 3.8 91 511-636 4-94 (413)
168 3qvo_A NMRA family protein; st 89.5 0.62 2.1E-05 49.1 7.6 103 509-646 21-128 (236)
169 3r6d_A NAD-dependent epimerase 89.5 0.57 1.9E-05 48.6 7.2 90 512-635 6-99 (221)
170 2b69_A UDP-glucuronate decarbo 89.5 0.84 2.9E-05 50.7 9.1 36 507-548 23-59 (343)
171 2bll_A Protein YFBG; decarboxy 89.5 0.76 2.6E-05 50.8 8.7 32 512-549 1-34 (345)
172 1lld_A L-lactate dehydrogenase 89.4 1.2 4.1E-05 49.2 10.2 74 114-209 7-84 (319)
173 3pef_A 6-phosphogluconate dehy 89.4 0.48 1.6E-05 51.8 6.8 32 512-549 2-33 (287)
174 3m2p_A UDP-N-acetylglucosamine 89.3 1.8 6.2E-05 47.2 11.5 94 114-240 2-114 (311)
175 1a5z_A L-lactate dehydrogenase 89.3 1.7 5.6E-05 48.5 11.2 71 116-209 2-76 (319)
176 1nvt_A Shikimate 5'-dehydrogen 89.3 0.38 1.3E-05 52.8 5.9 75 111-209 125-202 (287)
177 3g0o_A 3-hydroxyisobutyrate de 89.3 1.2 4.2E-05 49.0 10.1 33 511-549 7-39 (303)
178 3obb_A Probable 3-hydroxyisobu 89.2 0.35 1.2E-05 53.7 5.6 111 115-238 4-126 (300)
179 3qvo_A NMRA family protein; st 89.2 1.2 3.9E-05 46.9 9.5 98 114-240 23-130 (236)
180 1y1p_A ARII, aldehyde reductas 89.1 2.2 7.6E-05 46.8 12.2 107 112-240 9-137 (342)
181 3evt_A Phosphoglycerate dehydr 89.0 0.38 1.3E-05 54.0 5.7 36 508-549 134-169 (324)
182 2pzm_A Putative nucleotide sug 89.0 1.4 4.7E-05 48.8 10.3 36 111-147 17-53 (330)
183 3sxp_A ADP-L-glycero-D-mannohe 89.0 0.7 2.4E-05 51.8 8.0 118 509-649 8-144 (362)
184 2cvz_A Dehydrogenase, 3-hydrox 89.0 1.5 5E-05 47.6 10.3 87 512-643 2-91 (289)
185 1iy8_A Levodione reductase; ox 88.9 0.79 2.7E-05 49.2 8.0 64 509-597 11-75 (267)
186 3ggo_A Prephenate dehydrogenas 88.8 2.3 7.7E-05 47.3 11.9 83 114-223 33-117 (314)
187 3c85_A Putative glutathione-re 88.8 0.25 8.4E-06 50.1 3.7 90 509-634 37-129 (183)
188 2gf2_A Hibadh, 3-hydroxyisobut 88.8 0.53 1.8E-05 51.4 6.6 31 513-549 2-32 (296)
189 3sxp_A ADP-L-glycero-D-mannohe 88.8 1.8 6.2E-05 48.4 11.2 112 112-240 8-143 (362)
190 2gn4_A FLAA1 protein, UDP-GLCN 88.7 2 6.9E-05 48.0 11.6 99 112-235 19-142 (344)
191 1ks9_A KPA reductase;, 2-dehyd 88.7 1.2 4.2E-05 48.0 9.5 32 116-148 2-33 (291)
192 3i6i_A Putative leucoanthocyan 88.7 1.1 3.8E-05 49.8 9.4 102 509-639 8-115 (346)
193 3pqe_A L-LDH, L-lactate dehydr 88.6 0.68 2.3E-05 51.9 7.5 75 511-618 5-81 (326)
194 1ff9_A Saccharopine reductase; 88.6 0.52 1.8E-05 55.3 6.7 33 511-549 3-35 (450)
195 3onh_A Ubiquitin-activating en 88.6 0.53 1.8E-05 45.1 5.4 45 1013-1060 19-67 (127)
196 3pdu_A 3-hydroxyisobutyrate de 88.5 0.6 2E-05 51.0 6.8 32 512-549 2-33 (287)
197 1t2d_A LDH-P, L-lactate dehydr 88.5 1.4 4.9E-05 49.2 10.0 72 115-208 5-80 (322)
198 2hjr_A Malate dehydrogenase; m 88.5 0.77 2.6E-05 51.5 7.8 35 510-549 13-47 (328)
199 1sby_A Alcohol dehydrogenase; 88.5 0.89 3E-05 48.3 8.1 84 509-618 3-92 (254)
200 3rft_A Uronate dehydrogenase; 88.5 0.39 1.3E-05 51.7 5.3 34 511-550 3-37 (267)
201 2gn4_A FLAA1 protein, UDP-GLCN 88.5 1.3 4.4E-05 49.6 9.8 80 509-619 19-100 (344)
202 1ez4_A Lactate dehydrogenase; 88.5 1.7 5.8E-05 48.5 10.6 72 115-209 6-81 (318)
203 3kkj_A Amine oxidase, flavin-c 88.4 0.28 9.6E-06 50.5 3.9 33 511-549 2-34 (336)
204 3vku_A L-LDH, L-lactate dehydr 88.4 0.91 3.1E-05 50.9 8.2 75 510-619 8-85 (326)
205 2x4g_A Nucleoside-diphosphate- 88.3 0.8 2.7E-05 50.6 7.8 32 512-549 14-46 (342)
206 1lnq_A MTHK channels, potassiu 88.3 0.9 3.1E-05 50.8 8.3 88 114-231 115-208 (336)
207 2pv7_A T-protein [includes: ch 88.3 1 3.4E-05 49.7 8.5 32 512-549 22-54 (298)
208 4dqv_A Probable peptide synthe 88.1 1 3.5E-05 53.0 8.9 124 510-646 72-217 (478)
209 3fi9_A Malate dehydrogenase; s 88.0 0.84 2.9E-05 51.6 7.8 77 112-209 6-85 (343)
210 3rkr_A Short chain oxidoreduct 88.0 0.44 1.5E-05 51.1 5.3 63 508-597 26-89 (262)
211 3ioy_A Short-chain dehydrogena 87.9 0.73 2.5E-05 51.2 7.1 35 509-549 6-41 (319)
212 3p7m_A Malate dehydrogenase; p 87.9 0.83 2.8E-05 51.1 7.5 35 510-549 4-38 (321)
213 3vps_A TUNA, NAD-dependent epi 87.8 1.2 4.2E-05 48.5 8.8 37 111-148 4-41 (321)
214 4e21_A 6-phosphogluconate dehy 87.8 0.64 2.2E-05 52.8 6.7 37 508-550 19-55 (358)
215 2f1k_A Prephenate dehydrogenas 87.8 1.9 6.5E-05 46.5 10.2 30 116-146 2-31 (279)
216 2g5c_A Prephenate dehydrogenas 87.7 3 0.0001 45.1 11.7 81 115-222 2-84 (281)
217 3gt0_A Pyrroline-5-carboxylate 87.7 0.57 2E-05 50.0 5.8 82 512-631 3-84 (247)
218 2d5c_A AROE, shikimate 5-dehyd 87.7 1.4 4.7E-05 47.5 9.0 34 112-147 115-148 (263)
219 1vl6_A Malate oxidoreductase; 87.6 0.47 1.6E-05 54.3 5.3 37 111-147 189-225 (388)
220 2z1n_A Dehydrogenase; reductas 87.6 1.1 3.8E-05 47.9 8.1 35 509-549 5-40 (260)
221 1sb8_A WBPP; epimerase, 4-epim 87.6 2.4 8.3E-05 47.1 11.3 109 112-240 25-158 (352)
222 1xu9_A Corticosteroid 11-beta- 87.6 1 3.4E-05 48.9 7.9 35 509-549 26-61 (286)
223 3lk7_A UDP-N-acetylmuramoylala 87.6 1 3.5E-05 52.7 8.4 93 112-232 7-101 (451)
224 3sju_A Keto reductase; short-c 87.6 0.69 2.4E-05 50.2 6.5 36 508-549 21-57 (279)
225 1yb4_A Tartronic semialdehyde 87.5 0.8 2.7E-05 49.9 7.1 30 512-547 4-33 (295)
226 2bka_A CC3, TAT-interacting pr 87.5 3.2 0.00011 43.3 11.5 36 112-147 16-53 (242)
227 1x7d_A Ornithine cyclodeaminas 87.5 1.1 3.9E-05 50.6 8.4 77 112-210 127-204 (350)
228 2z1m_A GDP-D-mannose dehydrata 87.5 0.84 2.9E-05 50.3 7.3 34 510-549 2-36 (345)
229 1lu9_A Methylene tetrahydromet 87.5 1 3.5E-05 49.2 7.9 34 112-146 117-151 (287)
230 3i1j_A Oxidoreductase, short c 87.4 0.9 3.1E-05 47.9 7.2 36 508-549 11-47 (247)
231 3svt_A Short-chain type dehydr 87.4 1.2 4E-05 48.4 8.2 37 507-549 7-44 (281)
232 3nep_X Malate dehydrogenase; h 87.3 2.3 8E-05 47.3 10.7 72 116-209 2-78 (314)
233 3gaf_A 7-alpha-hydroxysteroid 87.3 0.86 2.9E-05 48.8 7.0 34 509-548 10-44 (256)
234 2ew2_A 2-dehydropantoate 2-red 87.2 1.8 6.2E-05 47.2 9.8 31 115-146 4-34 (316)
235 3enk_A UDP-glucose 4-epimerase 87.2 0.74 2.5E-05 50.9 6.7 33 511-549 5-38 (341)
236 3fbt_A Chorismate mutase and s 87.2 0.49 1.7E-05 52.0 5.0 36 112-147 120-155 (282)
237 2dc1_A L-aspartate dehydrogena 87.2 1 3.6E-05 47.6 7.6 78 513-642 2-81 (236)
238 2q1s_A Putative nucleotide sug 87.2 1.2 4.1E-05 50.4 8.5 37 508-549 29-66 (377)
239 1bg6_A N-(1-D-carboxylethyl)-L 87.1 1.6 5.6E-05 48.7 9.5 33 114-147 4-36 (359)
240 2zqz_A L-LDH, L-lactate dehydr 87.1 1.9 6.6E-05 48.3 9.9 73 114-209 9-85 (326)
241 2q1s_A Putative nucleotide sug 87.0 2.7 9.1E-05 47.4 11.3 102 112-241 30-157 (377)
242 2cvz_A Dehydrogenase, 3-hydrox 87.0 1.3 4.6E-05 47.8 8.5 66 115-212 2-67 (289)
243 2x6t_A ADP-L-glycero-D-manno-h 87.0 1.4 4.9E-05 49.1 8.9 39 109-147 41-80 (357)
244 3ucx_A Short chain dehydrogena 87.0 0.91 3.1E-05 48.8 7.0 36 508-549 8-44 (264)
245 4dll_A 2-hydroxy-3-oxopropiona 87.0 1.4 4.8E-05 49.0 8.8 36 111-147 28-63 (320)
246 3lyl_A 3-oxoacyl-(acyl-carrier 87.0 0.66 2.2E-05 49.1 5.8 34 509-548 3-37 (247)
247 2xxj_A L-LDH, L-lactate dehydr 86.9 1.8 6.1E-05 48.1 9.4 72 115-209 1-76 (310)
248 1ldn_A L-lactate dehydrogenase 86.8 1.4 4.8E-05 49.1 8.6 34 512-549 7-40 (316)
249 3tjr_A Short chain dehydrogena 86.8 1.1 3.8E-05 49.2 7.8 35 509-549 29-64 (301)
250 2dpo_A L-gulonate 3-dehydrogen 86.8 2 6.8E-05 48.0 9.8 36 112-148 4-39 (319)
251 4da9_A Short-chain dehydrogena 86.7 0.7 2.4E-05 50.3 6.0 64 508-597 26-90 (280)
252 2d4a_B Malate dehydrogenase; a 86.7 1.7 5.7E-05 48.3 9.1 32 513-549 1-32 (308)
253 2x0j_A Malate dehydrogenase; o 86.7 2 6.8E-05 47.5 9.6 32 512-547 1-32 (294)
254 3r6d_A NAD-dependent epimerase 86.6 2.1 7.3E-05 44.2 9.4 97 115-239 6-112 (221)
255 2pv7_A T-protein [includes: ch 86.6 1.1 3.8E-05 49.3 7.6 32 115-147 22-54 (298)
256 3pk0_A Short-chain dehydrogena 86.6 0.92 3.1E-05 48.7 6.8 35 509-549 8-43 (262)
257 2rcy_A Pyrroline carboxylate r 86.6 1 3.5E-05 48.2 7.1 34 114-147 4-40 (262)
258 3ehe_A UDP-glucose 4-epimerase 86.6 1.4 4.9E-05 48.0 8.5 23 512-534 2-25 (313)
259 3nzo_A UDP-N-acetylglucosamine 86.6 5.1 0.00017 45.8 13.4 105 110-235 31-165 (399)
260 3c24_A Putative oxidoreductase 86.5 1.9 6.6E-05 46.9 9.4 75 115-220 12-87 (286)
261 3u62_A Shikimate dehydrogenase 86.5 0.45 1.5E-05 51.5 4.1 36 112-148 107-142 (253)
262 1pjc_A Protein (L-alanine dehy 86.5 0.83 2.8E-05 51.9 6.6 35 112-147 165-199 (361)
263 3gvx_A Glycerate dehydrogenase 86.3 1.6 5.6E-05 48.0 8.6 35 509-549 120-154 (290)
264 3e48_A Putative nucleoside-dip 86.3 3.1 0.00011 44.7 10.9 93 116-237 2-108 (289)
265 3t4x_A Oxidoreductase, short c 86.3 1.8 6.2E-05 46.5 8.9 63 112-194 8-71 (267)
266 1zcj_A Peroxisomal bifunctiona 86.2 4.4 0.00015 47.5 12.9 32 115-147 38-69 (463)
267 4ibo_A Gluconate dehydrogenase 86.2 0.82 2.8E-05 49.5 6.2 35 508-548 23-58 (271)
268 1oju_A MDH, malate dehydrogena 86.2 1.7 5.7E-05 48.0 8.7 34 512-549 1-34 (294)
269 3ngx_A Bifunctional protein fo 86.2 0.69 2.4E-05 50.5 5.4 33 509-547 148-181 (276)
270 1guz_A Malate dehydrogenase; o 86.1 4.6 0.00016 44.7 12.3 72 116-209 2-78 (310)
271 3st7_A Capsular polysaccharide 86.1 0.77 2.6E-05 51.7 6.1 33 512-549 1-34 (369)
272 1t2d_A LDH-P, L-lactate dehydr 86.1 1.9 6.6E-05 48.1 9.2 33 512-549 5-37 (322)
273 2a9f_A Putative malic enzyme ( 86.1 0.64 2.2E-05 53.2 5.3 38 111-148 185-222 (398)
274 3fbt_A Chorismate mutase and s 86.1 0.51 1.7E-05 51.9 4.4 35 509-548 120-154 (282)
275 1x7d_A Ornithine cyclodeaminas 86.1 0.75 2.6E-05 52.1 5.9 77 509-620 127-204 (350)
276 2z1m_A GDP-D-mannose dehydrata 86.1 1.6 5.5E-05 48.0 8.6 35 112-147 1-36 (345)
277 2x4g_A Nucleoside-diphosphate- 86.0 2.8 9.7E-05 46.1 10.6 95 116-240 15-131 (342)
278 4gx0_A TRKA domain protein; me 86.0 1.3 4.5E-05 53.2 8.4 85 115-231 349-439 (565)
279 1p9l_A Dihydrodipicolinate red 86.0 1.7 5.8E-05 46.7 8.3 101 116-242 2-111 (245)
280 2h78_A Hibadh, 3-hydroxyisobut 85.9 1.2 4E-05 48.9 7.3 32 115-147 4-35 (302)
281 2vhw_A Alanine dehydrogenase; 85.9 0.76 2.6E-05 52.6 5.9 36 111-147 165-200 (377)
282 3qlj_A Short chain dehydrogena 85.9 0.84 2.9E-05 50.7 6.2 74 507-597 23-97 (322)
283 1a4i_A Methylenetetrahydrofola 85.9 0.85 2.9E-05 50.4 6.0 33 509-547 163-196 (301)
284 1dih_A Dihydrodipicolinate red 85.9 1.2 4.1E-05 48.7 7.2 101 510-646 4-106 (273)
285 3tfo_A Putative 3-oxoacyl-(acy 85.9 1.2 4E-05 48.2 7.1 34 510-549 3-37 (264)
286 4huj_A Uncharacterized protein 85.9 0.86 2.9E-05 47.8 5.9 31 512-548 24-55 (220)
287 2zyd_A 6-phosphogluconate dehy 85.8 1.5 5E-05 51.9 8.5 37 109-146 10-46 (480)
288 2c5a_A GDP-mannose-3', 5'-epim 85.8 1.1 3.8E-05 50.7 7.3 33 511-549 29-62 (379)
289 3uve_A Carveol dehydrogenase ( 85.6 1.3 4.5E-05 48.0 7.4 36 508-549 8-44 (286)
290 3nzo_A UDP-N-acetylglucosamine 85.6 2.2 7.6E-05 48.9 9.7 89 504-619 28-121 (399)
291 2axq_A Saccharopine dehydrogen 85.5 1.7 5.9E-05 51.1 8.9 93 111-232 20-117 (467)
292 3tox_A Short chain dehydrogena 85.5 0.89 3.1E-05 49.5 6.0 36 508-549 5-41 (280)
293 1ez4_A Lactate dehydrogenase; 85.5 2.2 7.6E-05 47.5 9.3 73 512-619 6-81 (318)
294 3qha_A Putative oxidoreductase 85.5 1.2 4.2E-05 48.9 7.1 34 511-550 15-48 (296)
295 3pgx_A Carveol dehydrogenase; 85.4 1.4 4.9E-05 47.6 7.6 76 508-597 12-88 (280)
296 1rkx_A CDP-glucose-4,6-dehydra 85.4 2.6 8.8E-05 46.9 10.0 37 507-549 5-42 (357)
297 3tsc_A Putative oxidoreductase 85.4 1.3 4.5E-05 47.8 7.3 76 508-597 8-84 (277)
298 2q1w_A Putative nucleotide sug 85.4 1.4 5E-05 48.6 7.8 36 508-549 18-54 (333)
299 3i6i_A Putative leucoanthocyan 85.4 1.7 5.8E-05 48.4 8.4 93 112-225 8-110 (346)
300 3v2h_A D-beta-hydroxybutyrate 85.3 1.6 5.4E-05 47.5 7.9 36 507-548 21-57 (281)
301 3r1i_A Short-chain type dehydr 85.2 1 3.4E-05 49.0 6.2 36 508-549 29-65 (276)
302 2ywl_A Thioredoxin reductase r 85.2 0.55 1.9E-05 47.0 3.8 32 513-550 3-34 (180)
303 4imr_A 3-oxoacyl-(acyl-carrier 85.2 1.2 4.3E-05 48.2 7.0 39 504-548 26-65 (275)
304 3nyw_A Putative oxidoreductase 85.2 2.1 7.3E-05 45.5 8.7 53 111-183 4-57 (250)
305 2zat_A Dehydrogenase/reductase 85.2 1.3 4.5E-05 47.2 7.1 36 508-549 11-47 (260)
306 2ae2_A Protein (tropinone redu 85.1 1.8 6.2E-05 46.2 8.2 35 509-549 7-42 (260)
307 4fgs_A Probable dehydrogenase 85.1 0.8 2.7E-05 50.1 5.3 39 505-549 23-62 (273)
308 3g0o_A 3-hydroxyisobutyrate de 85.1 1.8 6.1E-05 47.6 8.3 33 114-147 7-39 (303)
309 4hb9_A Similarities with proba 85.1 0.51 1.7E-05 53.3 4.0 33 511-549 1-33 (412)
310 4fn4_A Short chain dehydrogena 85.1 1.2 4E-05 48.2 6.5 83 508-617 4-91 (254)
311 4a26_A Putative C-1-tetrahydro 85.1 0.89 3.1E-05 50.2 5.7 35 508-548 162-197 (300)
312 4fs3_A Enoyl-[acyl-carrier-pro 85.0 1.4 4.7E-05 47.3 7.2 36 508-549 3-41 (256)
313 3enk_A UDP-glucose 4-epimerase 85.0 3.1 0.0001 45.8 10.2 104 114-240 5-134 (341)
314 3ko8_A NAD-dependent epimerase 85.0 3.3 0.00011 45.0 10.4 32 115-147 1-33 (312)
315 2zyd_A 6-phosphogluconate dehy 85.0 2.5 8.5E-05 49.9 9.9 37 507-549 11-47 (480)
316 3qy9_A DHPR, dihydrodipicolina 84.9 1.9 6.4E-05 46.3 8.1 82 512-646 4-86 (243)
317 3v2g_A 3-oxoacyl-[acyl-carrier 84.9 1.6 5.6E-05 47.1 7.8 35 508-548 28-63 (271)
318 4gx0_A TRKA domain protein; me 84.9 1.3 4.4E-05 53.3 7.6 87 512-637 349-435 (565)
319 2yq5_A D-isomer specific 2-hyd 84.9 2.2 7.4E-05 48.2 8.9 37 508-550 145-181 (343)
320 1ur5_A Malate dehydrogenase; o 84.8 2.9 0.0001 46.3 9.9 33 512-549 3-35 (309)
321 1vkn_A N-acetyl-gamma-glutamyl 84.8 1.6 5.6E-05 49.3 7.8 93 512-642 14-107 (351)
322 3o38_A Short chain dehydrogena 84.8 2.3 8E-05 45.3 8.9 34 112-146 20-55 (266)
323 1vl6_A Malate oxidoreductase; 84.7 0.54 1.9E-05 53.7 3.9 37 508-549 189-225 (388)
324 1rkx_A CDP-glucose-4,6-dehydra 84.7 4.8 0.00016 44.7 11.8 37 110-147 5-42 (357)
325 3p2o_A Bifunctional protein fo 84.7 1 3.6E-05 49.3 6.0 34 508-547 157-191 (285)
326 4egf_A L-xylulose reductase; s 84.7 1.2 4E-05 48.0 6.4 36 508-549 17-53 (266)
327 3ksu_A 3-oxoacyl-acyl carrier 84.7 1.2 4.1E-05 47.9 6.5 34 509-548 9-43 (262)
328 2c5a_A GDP-mannose-3', 5'-epim 84.6 3.5 0.00012 46.5 10.7 33 114-147 29-62 (379)
329 4iin_A 3-ketoacyl-acyl carrier 84.6 0.88 3E-05 49.0 5.4 35 508-548 26-61 (271)
330 4f6c_A AUSA reductase domain p 84.6 1.3 4.4E-05 51.0 7.1 112 511-649 69-202 (427)
331 1gee_A Glucose 1-dehydrogenase 84.5 1.6 5.6E-05 46.3 7.4 35 508-548 4-39 (261)
332 1i36_A Conserved hypothetical 84.5 2.4 8.3E-05 45.3 8.8 29 116-145 2-30 (264)
333 1xg5_A ARPG836; short chain de 84.5 3 0.0001 44.8 9.7 63 111-193 29-92 (279)
334 3i83_A 2-dehydropantoate 2-red 84.5 1.1 3.7E-05 49.8 6.2 32 115-147 3-34 (320)
335 3d0o_A L-LDH 1, L-lactate dehy 84.5 2.2 7.5E-05 47.5 8.7 37 509-549 4-40 (317)
336 2jah_A Clavulanic acid dehydro 84.4 1.9 6.6E-05 45.7 7.9 34 509-548 5-39 (247)
337 1orr_A CDP-tyvelose-2-epimeras 84.4 1.6 5.4E-05 48.2 7.5 31 512-548 2-33 (347)
338 3hn2_A 2-dehydropantoate 2-red 84.4 1.1 3.8E-05 49.6 6.2 32 115-147 3-34 (312)
339 1fmc_A 7 alpha-hydroxysteroid 84.4 1.3 4.3E-05 46.9 6.4 34 509-548 9-43 (255)
340 1b0a_A Protein (fold bifunctio 84.4 0.78 2.7E-05 50.4 4.8 34 508-547 156-190 (288)
341 2i99_A MU-crystallin homolog; 84.4 0.99 3.4E-05 50.2 5.8 36 111-146 132-168 (312)
342 4fc7_A Peroxisomal 2,4-dienoyl 84.3 1.5 5.1E-05 47.5 7.1 36 508-549 24-60 (277)
343 1y6j_A L-lactate dehydrogenase 84.3 1.3 4.6E-05 49.3 6.9 73 114-209 7-83 (318)
344 4gwg_A 6-phosphogluconate dehy 84.3 1.5 5.2E-05 51.8 7.6 118 114-237 4-131 (484)
345 1pzg_A LDH, lactate dehydrogen 84.3 2.9 9.7E-05 46.9 9.6 73 115-208 10-86 (331)
346 3lf2_A Short chain oxidoreduct 84.3 2.8 9.5E-05 44.9 9.2 62 112-193 6-68 (265)
347 3ftp_A 3-oxoacyl-[acyl-carrier 84.3 1.1 3.8E-05 48.4 6.1 35 508-548 25-60 (270)
348 1oaa_A Sepiapterin reductase; 84.3 1.2 4.3E-05 47.4 6.4 64 509-597 4-71 (259)
349 2izz_A Pyrroline-5-carboxylate 84.2 1.2 4E-05 49.7 6.3 33 114-146 22-57 (322)
350 3ego_A Probable 2-dehydropanto 84.2 1.5 5.1E-05 48.5 7.1 31 114-146 2-32 (307)
351 3ew7_A LMO0794 protein; Q8Y8U8 84.2 1.5 5.3E-05 44.8 6.9 92 116-237 2-105 (221)
352 1omo_A Alanine dehydrogenase; 84.1 2.2 7.7E-05 47.5 8.6 73 113-210 124-197 (322)
353 3v8b_A Putative dehydrogenase, 84.1 1.1 3.7E-05 48.9 5.9 35 508-548 25-60 (283)
354 3phh_A Shikimate dehydrogenase 84.1 0.63 2.2E-05 50.8 3.9 32 511-548 118-149 (269)
355 2ydy_A Methionine adenosyltran 84.0 0.92 3.2E-05 49.6 5.4 32 511-548 2-34 (315)
356 3l77_A Short-chain alcohol deh 84.0 1.9 6.6E-05 45.0 7.7 82 511-618 2-88 (235)
357 2eez_A Alanine dehydrogenase; 83.9 0.99 3.4E-05 51.4 5.7 35 111-146 163-197 (369)
358 3doj_A AT3G25530, dehydrogenas 83.9 1.8 6E-05 47.9 7.6 38 111-149 18-55 (310)
359 3kkj_A Amine oxidase, flavin-c 83.9 0.83 2.8E-05 46.8 4.6 33 114-147 2-34 (336)
360 3hn2_A 2-dehydropantoate 2-red 83.8 0.75 2.6E-05 51.0 4.5 32 512-549 3-34 (312)
361 3afn_B Carbonyl reductase; alp 83.8 1.6 5.6E-05 45.9 7.0 35 509-549 5-40 (258)
362 2rcy_A Pyrroline carboxylate r 83.7 1.6 5.6E-05 46.5 7.1 37 511-549 4-40 (262)
363 1jay_A Coenzyme F420H2:NADP+ o 83.7 2.6 8.8E-05 43.4 8.3 30 116-146 2-32 (212)
364 3l07_A Bifunctional protein fo 83.7 1.2 4.2E-05 48.7 6.0 34 508-547 158-192 (285)
365 1yxm_A Pecra, peroxisomal tran 83.7 1.7 5.9E-05 47.3 7.4 35 508-548 15-50 (303)
366 4f3y_A DHPR, dihydrodipicolina 83.7 1.5 5.1E-05 47.9 6.7 98 511-646 7-107 (272)
367 3hwr_A 2-dehydropantoate 2-red 83.7 2.7 9.3E-05 46.6 9.0 31 113-144 18-48 (318)
368 2zqz_A L-LDH, L-lactate dehydr 83.6 2.6 8.7E-05 47.2 8.8 34 511-548 9-42 (326)
369 2xxj_A L-LDH, L-lactate dehydr 83.6 2.1 7.1E-05 47.6 8.0 73 512-619 1-76 (310)
370 2iz1_A 6-phosphogluconate dehy 83.5 2.5 8.6E-05 49.8 9.1 32 114-146 5-36 (474)
371 3b1f_A Putative prephenate deh 83.5 3.5 0.00012 44.7 9.7 34 113-146 5-39 (290)
372 3eag_A UDP-N-acetylmuramate:L- 83.5 4.1 0.00014 45.4 10.4 87 115-232 5-95 (326)
373 1iy8_A Levodione reductase; ox 83.4 3.7 0.00013 43.9 9.8 35 111-146 10-45 (267)
374 4iiu_A 3-oxoacyl-[acyl-carrier 83.4 1.1 3.9E-05 48.0 5.6 30 506-535 21-51 (267)
375 2a9f_A Putative malic enzyme ( 83.3 0.68 2.3E-05 53.0 3.9 39 508-551 185-223 (398)
376 1sby_A Alcohol dehydrogenase; 83.3 3.2 0.00011 43.9 9.1 35 112-146 3-38 (254)
377 3imf_A Short chain dehydrogena 83.3 0.82 2.8E-05 48.9 4.4 36 508-549 3-39 (257)
378 2ydy_A Methionine adenosyltran 83.3 2.2 7.5E-05 46.5 8.0 32 114-146 2-34 (315)
379 2qyt_A 2-dehydropantoate 2-red 83.2 1.8 6.1E-05 47.5 7.3 31 116-146 10-45 (317)
380 3u62_A Shikimate dehydrogenase 83.2 0.67 2.3E-05 50.1 3.7 35 509-549 107-141 (253)
381 2dvm_A Malic enzyme, 439AA lon 83.2 0.78 2.7E-05 53.5 4.4 35 111-145 183-219 (439)
382 3gvx_A Glycerate dehydrogenase 83.2 0.51 1.7E-05 52.1 2.7 44 104-148 112-155 (290)
383 3dtt_A NADP oxidoreductase; st 83.1 0.75 2.6E-05 49.1 4.0 38 506-549 14-51 (245)
384 3e48_A Putative nucleoside-dip 83.1 2.4 8.3E-05 45.6 8.2 96 512-643 1-106 (289)
385 3u9l_A 3-oxoacyl-[acyl-carrier 83.1 2.1 7E-05 47.7 7.7 89 509-619 3-96 (324)
386 2gdz_A NAD+-dependent 15-hydro 83.0 1.5 5E-05 47.0 6.3 35 509-549 5-40 (267)
387 2iz1_A 6-phosphogluconate dehy 82.9 3.9 0.00013 48.1 10.5 32 511-548 5-36 (474)
388 3fef_A Putative glucosidase LP 82.9 1.5 5.1E-05 51.3 6.7 108 510-648 4-115 (450)
389 1omo_A Alanine dehydrogenase; 82.9 2.2 7.6E-05 47.6 7.9 73 510-620 124-197 (322)
390 1nyt_A Shikimate 5-dehydrogena 82.9 1 3.5E-05 48.9 5.1 34 112-146 117-150 (271)
391 3k6j_A Protein F01G10.3, confi 82.9 6.7 0.00023 45.9 12.2 33 115-148 55-87 (460)
392 3sc6_A DTDP-4-dehydrorhamnose 82.9 3.6 0.00012 44.1 9.4 104 116-240 7-111 (287)
393 2hrz_A AGR_C_4963P, nucleoside 82.8 1.9 6.4E-05 47.7 7.3 41 509-549 12-54 (342)
394 2jl1_A Triphenylmethane reduct 82.8 0.72 2.4E-05 49.7 3.7 98 512-645 1-109 (287)
395 4aj2_A L-lactate dehydrogenase 82.8 2.1 7.1E-05 48.1 7.6 77 508-618 16-95 (331)
396 1z7e_A Protein aRNA; rossmann 82.8 1.7 5.8E-05 53.3 7.5 36 508-549 312-349 (660)
397 1zem_A Xylitol dehydrogenase; 82.7 2.4 8.2E-05 45.3 7.8 34 509-548 5-39 (262)
398 1npy_A Hypothetical shikimate 82.7 0.99 3.4E-05 49.3 4.8 33 510-547 118-150 (271)
399 1o0s_A NAD-ME, NAD-dependent m 82.7 0.4 1.4E-05 57.1 1.7 60 492-551 283-365 (605)
400 3i83_A 2-dehydropantoate 2-red 82.6 0.77 2.6E-05 51.1 4.0 34 511-550 2-35 (320)
401 2q1w_A Putative nucleotide sug 82.6 4.1 0.00014 44.9 10.0 36 111-147 18-54 (333)
402 3cky_A 2-hydroxymethyl glutara 82.5 1.9 6.5E-05 47.1 7.1 93 113-235 3-99 (301)
403 3pef_A 6-phosphogluconate dehy 82.4 2.1 7E-05 46.6 7.3 33 115-148 2-34 (287)
404 1o6z_A MDH, malate dehydrogena 82.4 4.2 0.00014 44.9 9.9 73 116-209 2-79 (303)
405 2hun_A 336AA long hypothetical 82.4 1.7 5.7E-05 47.9 6.6 35 511-549 3-38 (336)
406 3h2s_A Putative NADH-flavin re 82.4 1.9 6.7E-05 44.3 6.8 92 116-237 2-107 (224)
407 2qq5_A DHRS1, dehydrogenase/re 82.4 1.2 4.2E-05 47.5 5.4 35 509-549 3-38 (260)
408 1ek6_A UDP-galactose 4-epimera 82.4 1.4 4.9E-05 48.7 6.1 33 511-549 2-35 (348)
409 4gbj_A 6-phosphogluconate dehy 82.3 0.95 3.2E-05 50.0 4.5 35 510-550 4-38 (297)
410 1ff9_A Saccharopine reductase; 82.3 3.3 0.00011 48.4 9.4 34 113-147 2-35 (450)
411 3un1_A Probable oxidoreductase 82.2 2.2 7.4E-05 45.8 7.3 81 507-595 24-106 (260)
412 4dqv_A Probable peptide synthe 82.2 4.8 0.00017 47.1 10.9 108 112-240 71-219 (478)
413 3ehe_A UDP-glucose 4-epimerase 82.2 4.1 0.00014 44.4 9.6 29 115-145 2-31 (313)
414 1eq2_A ADP-L-glycero-D-mannohe 82.0 2.2 7.6E-05 46.2 7.4 32 116-147 1-33 (310)
415 3gt0_A Pyrroline-5-carboxylate 82.0 1.4 4.8E-05 46.9 5.7 32 115-146 3-37 (247)
416 1wma_A Carbonyl reductase [NAD 82.0 1.4 4.8E-05 46.8 5.7 33 511-549 4-38 (276)
417 3ijp_A DHPR, dihydrodipicolina 82.0 2.1 7.2E-05 47.1 7.1 99 512-646 22-122 (288)
418 1lld_A L-lactate dehydrogenase 81.9 0.9 3.1E-05 50.3 4.2 35 511-549 7-41 (319)
419 3rkr_A Short chain oxidoreduct 81.9 2.8 9.5E-05 44.8 8.0 37 109-146 24-61 (262)
420 1qyd_A Pinoresinol-lariciresin 81.9 5.5 0.00019 43.1 10.6 97 511-635 4-107 (313)
421 1gpj_A Glutamyl-tRNA reductase 81.9 1.1 3.9E-05 51.5 5.2 35 112-146 165-199 (404)
422 1vl0_A DTDP-4-dehydrorhamnose 81.8 4.3 0.00015 43.6 9.6 36 111-147 9-45 (292)
423 2hun_A 336AA long hypothetical 81.8 6.6 0.00023 43.0 11.3 35 113-147 2-38 (336)
424 3hhp_A Malate dehydrogenase; M 81.8 3.8 0.00013 45.5 9.2 75 115-209 1-78 (312)
425 1txg_A Glycerol-3-phosphate de 81.8 3.8 0.00013 45.2 9.3 94 116-234 2-104 (335)
426 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.8 1.5 5.2E-05 46.7 5.9 34 509-548 19-53 (274)
427 4dyv_A Short-chain dehydrogena 81.8 1.6 5.5E-05 47.2 6.1 36 508-549 25-61 (272)
428 3svt_A Short-chain type dehydr 81.7 4.5 0.00015 43.6 9.7 35 111-146 8-43 (281)
429 1gpj_A Glutamyl-tRNA reductase 81.7 0.78 2.7E-05 53.0 3.7 35 509-548 165-199 (404)
430 2hk9_A Shikimate dehydrogenase 81.7 0.9 3.1E-05 49.5 4.0 36 508-549 126-161 (275)
431 3kb6_A D-lactate dehydrogenase 81.7 2.5 8.6E-05 47.5 7.8 35 508-548 138-172 (334)
432 2i6t_A Ubiquitin-conjugating e 81.6 4.9 0.00017 44.4 10.0 33 115-147 15-48 (303)
433 1qyc_A Phenylcoumaran benzylic 81.6 3.1 0.0001 45.1 8.4 98 511-635 4-104 (308)
434 3k96_A Glycerol-3-phosphate de 81.6 3.3 0.00011 46.9 8.8 33 114-147 29-61 (356)
435 3ado_A Lambda-crystallin; L-gu 81.5 6 0.00021 44.1 10.7 109 115-238 7-126 (319)
436 1oc2_A DTDP-glucose 4,6-dehydr 81.5 2.8 9.5E-05 46.3 8.1 108 512-648 5-130 (348)
437 3rft_A Uronate dehydrogenase; 81.5 2.3 7.8E-05 45.6 7.1 35 113-148 2-37 (267)
438 3osu_A 3-oxoacyl-[acyl-carrier 81.5 2 7E-05 45.4 6.7 33 510-548 3-36 (246)
439 2hq1_A Glucose/ribitol dehydro 81.4 2.5 8.6E-05 44.3 7.3 33 509-547 3-36 (247)
440 3ghy_A Ketopantoate reductase 81.4 0.76 2.6E-05 51.5 3.4 32 511-548 3-34 (335)
441 3mog_A Probable 3-hydroxybutyr 81.4 6.1 0.00021 46.6 11.3 34 114-148 5-38 (483)
442 1xq1_A Putative tropinone redu 81.4 1.4 4.7E-05 47.0 5.3 35 509-549 12-47 (266)
443 1e6u_A GDP-fucose synthetase; 81.4 1.5 5.2E-05 47.9 5.8 32 511-548 3-35 (321)
444 3nep_X Malate dehydrogenase; h 81.4 3.5 0.00012 45.9 8.7 34 512-549 1-34 (314)
445 2dc1_A L-aspartate dehydrogena 81.4 3.9 0.00013 43.1 8.8 32 116-147 2-33 (236)
446 1spx_A Short-chain reductase f 81.3 2 6.7E-05 46.3 6.6 35 509-549 4-39 (278)
447 3g17_A Similar to 2-dehydropan 81.3 0.81 2.8E-05 50.2 3.5 33 511-549 2-34 (294)
448 3hdj_A Probable ornithine cycl 81.3 2 6.9E-05 47.8 6.7 73 113-210 120-193 (313)
449 3jtm_A Formate dehydrogenase, 81.2 1.6 5.5E-05 49.4 6.0 84 509-617 162-255 (351)
450 2gas_A Isoflavone reductase; N 81.2 6.1 0.00021 42.6 10.6 98 511-635 2-103 (307)
451 3e03_A Short chain dehydrogena 81.1 2.9 9.9E-05 45.1 7.9 36 509-550 4-40 (274)
452 2aef_A Calcium-gated potassium 81.1 1.9 6.4E-05 45.4 6.1 89 511-636 9-97 (234)
453 3c1o_A Eugenol synthase; pheny 81.0 5.2 0.00018 43.6 10.0 97 511-635 4-104 (321)
454 1nyt_A Shikimate 5-dehydrogena 81.0 0.91 3.1E-05 49.3 3.7 34 509-548 117-150 (271)
455 3s55_A Putative short-chain de 81.0 6 0.0002 42.6 10.3 41 106-147 2-43 (281)
456 1pj3_A NAD-dependent malic enz 80.9 0.21 7.2E-06 59.2 -1.5 60 492-551 247-329 (564)
457 2i99_A MU-crystallin homolog; 80.9 1.2 4.2E-05 49.4 4.9 35 509-548 133-168 (312)
458 3s55_A Putative short-chain de 80.9 1.7 5.8E-05 47.0 5.9 37 507-549 6-43 (281)
459 1ek6_A UDP-galactose 4-epimera 80.9 4.5 0.00015 44.6 9.5 109 114-240 2-137 (348)
460 3pxx_A Carveol dehydrogenase; 80.9 2.2 7.6E-05 46.0 6.8 97 508-619 7-108 (287)
461 3qlj_A Short chain dehydrogena 80.8 3.3 0.00011 45.8 8.3 68 105-182 18-86 (322)
462 3i1j_A Oxidoreductase, short c 80.8 4.6 0.00016 42.4 9.1 35 111-146 11-46 (247)
463 2nwq_A Probable short-chain de 80.8 2.3 7.9E-05 46.0 6.9 36 507-549 18-54 (272)
464 2x9g_A PTR1, pteridine reducta 80.8 2.6 9E-05 45.7 7.4 36 508-549 20-56 (288)
465 4ej6_A Putative zinc-binding d 80.8 1.7 5.7E-05 49.4 6.0 34 113-146 182-215 (370)
466 4a5o_A Bifunctional protein fo 80.7 1.8 6.2E-05 47.4 5.9 34 508-547 158-192 (286)
467 1gq2_A Malic enzyme; oxidoredu 80.7 0.37 1.3E-05 57.0 0.5 45 507-551 278-327 (555)
468 3pxx_A Carveol dehydrogenase; 80.7 3.7 0.00013 44.1 8.6 38 109-147 5-43 (287)
469 1z82_A Glycerol-3-phosphate de 80.7 2.3 8E-05 47.3 7.1 89 116-234 16-111 (335)
470 3l6d_A Putative oxidoreductase 80.7 1.2 4E-05 49.3 4.6 34 114-148 9-42 (306)
471 2j6i_A Formate dehydrogenase; 80.5 1.8 6.3E-05 49.2 6.2 51 97-147 141-197 (364)
472 3qiv_A Short-chain dehydrogena 80.5 5.5 0.00019 42.0 9.6 35 111-146 6-41 (253)
473 3oh8_A Nucleoside-diphosphate 80.5 7.4 0.00025 46.0 11.8 34 114-148 147-181 (516)
474 2c2x_A Methylenetetrahydrofola 80.4 1.4 4.8E-05 48.2 4.9 78 509-644 156-234 (281)
475 3is3_A 17BETA-hydroxysteroid d 80.4 1.5 5.2E-05 47.2 5.2 35 508-548 15-50 (270)
476 1vpd_A Tartronate semialdehyde 80.4 2.6 9E-05 45.8 7.2 90 116-235 7-100 (299)
477 1f0y_A HCDH, L-3-hydroxyacyl-C 80.3 1 3.6E-05 49.5 4.0 32 512-549 16-47 (302)
478 3hg7_A D-isomer specific 2-hyd 80.2 0.74 2.5E-05 51.6 2.7 51 97-148 121-173 (324)
479 4dmm_A 3-oxoacyl-[acyl-carrier 80.1 1.8 6E-05 46.7 5.7 35 508-548 25-60 (269)
480 3k5p_A D-3-phosphoglycerate de 80.1 3.1 0.00011 48.1 8.0 36 508-549 153-188 (416)
481 1orr_A CDP-tyvelose-2-epimeras 80.1 5.5 0.00019 43.8 9.8 104 115-240 2-130 (347)
482 2cul_A Glucose-inhibited divis 80.1 1.1 3.9E-05 47.1 4.0 33 511-549 3-35 (232)
483 2ejw_A HDH, homoserine dehydro 80.0 2.9 0.0001 46.9 7.6 31 610-640 66-96 (332)
484 3obb_A Probable 3-hydroxyisobu 80.0 4.3 0.00015 44.8 8.9 31 512-548 4-34 (300)
485 3sc6_A DTDP-4-dehydrorhamnose 80.0 1.1 3.7E-05 48.3 3.9 31 512-548 6-37 (287)
486 1n2s_A DTDP-4-, DTDP-glucose o 80.0 1.1 3.6E-05 48.6 3.9 89 512-648 1-109 (299)
487 1hye_A L-lactate/malate dehydr 80.0 5.1 0.00017 44.4 9.5 76 116-209 2-83 (313)
488 2p4q_A 6-phosphogluconate dehy 80.0 5.4 0.00018 47.3 10.2 96 510-644 9-111 (497)
489 3ioy_A Short-chain dehydrogena 80.0 4.4 0.00015 44.9 9.0 63 111-193 5-68 (319)
490 3b1f_A Putative prephenate deh 79.9 1.8 6.3E-05 47.0 5.8 94 511-643 6-102 (290)
491 3qha_A Putative oxidoreductase 79.9 1.3 4.3E-05 48.8 4.4 34 114-148 15-48 (296)
492 3f9i_A 3-oxoacyl-[acyl-carrier 79.9 1.8 6.1E-05 45.7 5.5 34 509-548 12-46 (249)
493 3pp8_A Glyoxylate/hydroxypyruv 79.9 0.65 2.2E-05 51.9 2.1 51 97-148 120-172 (315)
494 1vl0_A DTDP-4-dehydrorhamnose 79.8 1.2 4.2E-05 48.0 4.3 35 509-549 10-45 (292)
495 3rwb_A TPLDH, pyridoxal 4-dehy 79.8 2.2 7.4E-05 45.3 6.1 36 508-549 3-39 (247)
496 3grk_A Enoyl-(acyl-carrier-pro 79.7 3.9 0.00013 44.6 8.4 36 508-549 28-66 (293)
497 2ahr_A Putative pyrroline carb 79.6 4.2 0.00014 43.3 8.4 85 512-640 4-88 (259)
498 3d4o_A Dipicolinate synthase s 79.6 1.6 5.6E-05 47.8 5.2 36 111-147 152-187 (293)
499 1g0o_A Trihydroxynaphthalene r 79.6 1.7 5.9E-05 47.0 5.4 35 509-549 27-62 (283)
500 2ewd_A Lactate dehydrogenase,; 79.6 1.1 3.7E-05 49.9 3.8 34 511-549 4-37 (317)
No 1
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-215 Score=2011.09 Aligned_cols=998 Identities=45% Similarity=0.815 Sum_probs=938.9
Q ss_pred CchhHhHhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchH
Q 001331 90 TDIDEDLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNR 169 (1099)
Q Consensus 90 ~~~~~~~YsRQi~l~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~K 169 (1099)
.+++++|||||+++||.++|+||++++|+|+|+||+|+++||||+++|||+|+|+|+|.|+.+||+||||++++|||++|
T Consensus 3 ~~id~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGVg~itlvD~D~V~~sNL~RQ~l~~~~dvG~~K 82 (1015)
T 3cmm_A 3 GEIDESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGVKSMTVFDPEPVQLADLSTQFFLTEKDIGQKR 82 (1015)
T ss_dssp CCCCHHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCCSEEEEECCSBCCGGGGGTCTTCCGGGTTSBH
T ss_pred hhhhhHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCCCeEEEecCCEechhhhccccccChhhcChHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcEEEEEecCCChhhccCCcEEEEecC-CHHHHHHHHHHHHhcCCCceeEEEeecceeEEEEEEcCC
Q 001331 170 ALASVQKLQELNNAVVLSTLTSKLTKEQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCDFGP 248 (1099)
Q Consensus 170 aea~~~~L~eLNp~V~v~~~~~~l~~~~l~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G~vf~d~g~ 248 (1099)
|++++++|+++||+|+|+++...++++++.+||+||+|.+ +.+.+..|+++|++++ +|||++++.|++|++|+|+|+
T Consensus 83 a~a~~~~L~~lNP~v~v~~~~~~l~~~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~v~~d~~~ 160 (1015)
T 3cmm_A 83 GDVTRAKLAELNAYVPVNVLDSLDDVTQLSQFQVVVATDTVSLEDKVKINEFCHSSG--IRFISSETRGLFGNTFVDLGD 160 (1015)
T ss_dssp HHHHHHHHTTSCTTSCEEECCCCCCSTTGGGCSEEEECTTSCHHHHHHHHHHHHHHT--CEEEEEEEETTEEEEEEECCS
T ss_pred HHHHHHHHHHHCCCCeEEEecCCCCHHHHhcCCEEEEcCCCCHHHHHHHHHHHHHcC--CCEEEEEecccEEEEEecCCC
Confidence 9999999999999999999999999899999999999999 9999999999999999 999999999999999999999
Q ss_pred ceEEEcCCCCCCcceeecccccCCCceeeeccccccccccCCeeEEEEeecccccCCCCCccccccCCceeeeccccccc
Q 001331 249 EFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEEDTTNY 328 (1099)
Q Consensus 249 ~~~v~d~~ge~p~~~~i~~I~~~~~~lv~~~~~~~~~~~dgd~v~f~ev~gm~eln~~~~~~i~~~~~~~f~i~~Dt~~f 328 (1099)
.|.|.+.+|+.|.++.|.+| +.|++++++++.+|++++||++.|++++||.++|+++++++++.+||+|.| .|++.|
T Consensus 161 ~~~c~~~~~~~p~~~~i~~i--~~p~~v~~l~~~~h~~~~gd~v~F~ev~gm~elN~~e~~~i~~~~p~~f~I-~Dts~~ 237 (1015)
T 3cmm_A 161 EFTVLDPTGEEPRTGMVSDI--EPDGTVTMLDDNRHGLEDGNFVRFSEVEGLDKLNDGTLFKVEVLGPFAFRI-GSVKEY 237 (1015)
T ss_dssp CEEESBSSCCCCCEEEEEEE--CTTCEEEESTTCCCCCCTTCEEEEECCBTSGGGGSSCCEECEEEETTEEEC-SCCTTT
T ss_pred ceEEeeCCCCCCccccccCC--CCCceeEeeecccccCCCCCeEEEEeeccchhhcCccceeeEEcCCceeEe-cccchh
Confidence 99999999999999999999 567899999999999999999999999999999999999999999999999 699999
Q ss_pred cceeecceEEEeeCCeeecccchHHhhcCCCCcccccCccCCCCChHHHHHHHHHHHHHHh-CCCCCCCCHHHHHHHHHH
Q 001331 329 GTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALDKFVSEL-GRFPVAGSEEDAQKLISV 407 (1099)
Q Consensus 329 ~~y~~gg~~~qvk~p~~i~f~sL~e~l~~p~~~l~~d~~k~~~~~~l~~~~~al~~F~~~~-gr~P~~~~~~D~~~l~~~ 407 (1099)
..|++||+++|+|+|++++|++|++.+++| .++.+|+.+++++..+|++||||++|.++| ||+|++++++|+++|+++
T Consensus 238 ~~yv~~g~~~qvk~p~~i~f~~l~~~l~~p-~~l~~d~~k~~~~~~l~~~~~Al~~F~~~~~gr~P~~~~~~D~~~l~~~ 316 (1015)
T 3cmm_A 238 GEYKKGGIFTEVKVPRKISFKSLKQQLSNP-EFVFSDFAKFDRAAQLHLGFQALHQFAVRHNGELPRTMNDEDANELIKL 316 (1015)
T ss_dssp CCCCBCCEEEECCCCEEECCCCHHHHHHSC-CBCCSCGGGTHHHHHHHHHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHH
T ss_pred hhhhcCceeEEecCCcccCHHHHHHHHcCh-HHHHHHHhccCcchHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999 477889998888999999999999999999 999999999999999999
Q ss_pred HHHHHHhcCCC--CCCCCCHHHHHHHHhhcccccCchhhhhhhhhhHHHHHhhcCCccccceeeeeccCCCCCC---CCC
Q 001331 408 ATNINESLGDG--RVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPT---EPL 482 (1099)
Q Consensus 408 a~~i~~~~~~~--~~~~i~~~~i~~~a~~~~~el~pvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~~e~l~~---~~~ 482 (1099)
+++++.+.+.. ...+++++++++|+++++++|||||||+||+|||||||+|||||+||+||||||+++++|. .++
T Consensus 317 a~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~el~pvaA~iGGivAQEVIKaiT~kf~Pi~~~~~~d~~~~~~~~~~~~~ 396 (1015)
T 3cmm_A 317 VTDLSVQQPEVLGEGVDVNEDLIKELSYQARGDIPGVVAFFGGLVAQEVLKACSGKFTPLKQFMYFDSLESLPDPKNFPR 396 (1015)
T ss_dssp HHHHHHHCHHHHCTTCCCCHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHCBSCCCCSEEEEECGGGSCCTTTSCC
T ss_pred HHHHHHhcCCCccccccCcHHHHHHHHHhcCcccCcHHHHhcchHHHHHHHHhccCCCcccceEEecchhhccccccCCC
Confidence 99998764311 0036889999999999999999999999999999999999999999999999999999994 567
Q ss_pred CCCCCCCccCchhhhhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCccccc
Q 001331 483 DSTEFKPINSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLF 562 (1099)
Q Consensus 483 ~~~~~~~~~~Rydrqi~l~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf 562 (1099)
+++++++.++||+||+++||.++|++|+++||+||||||+||++|++||++||+||++|+|+|+|+|+|+.|||||||||
T Consensus 397 ~~~~~~~~~~Ry~rq~~l~G~~~q~kL~~~~VlvVGaGGlGsevlk~La~~Gv~~g~~G~i~lvD~D~Ve~SNLnRQ~lf 476 (1015)
T 3cmm_A 397 NEKTTQPVNSRYDNQIAVFGLDFQKKIANSKVFLVGSGAIGCEMLKNWALLGLGSGSDGYIVVTDNDSIEKSNLNRQFLF 476 (1015)
T ss_dssp STTTTSCCSSTTHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTTTCSTTCEEEEECCCBCCGGGTTTCTTC
T ss_pred ChhhccchhhhhhhHHHhcCHHHHHHHhcCeEEEEecCHHHHHHHHHHHHcCcCcCCCCeEEEEeCCEeccccccccccC
Confidence 88888888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcccchHHHHHHHHHHhhCCCC--eEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEE
Q 001331 563 RDWNIGQAKSTVAASAATSINPRL--NIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLE 640 (1099)
Q Consensus 563 ~~~diG~~Ka~vaa~~l~~~np~~--~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~ 640 (1099)
+.+|||++||++|+++++++||++ +|+++..+++++++.+|+++||+++|+||+|+||+++|++++++|+.+++|+|+
T Consensus 477 ~~~dvG~~Ka~~aa~~l~~iNP~v~~~v~~~~~~i~~~~~~~~~~~~~~~~D~Vi~a~Dn~~aR~~ln~~c~~~~~Pli~ 556 (1015)
T 3cmm_A 477 RPKDVGKNKSEVAAEAVCAMNPDLKGKINAKIDKVGPETEEIFNDSFWESLDFVTNALDNVDARTYVDRRCVFYRKPLLE 556 (1015)
T ss_dssp CGGGTTSBHHHHHHHHHHHHCGGGTTTEEEECCCCSGGGTTTSCHHHHHHCSEEEECCSSHHHHHHHHHHHHHHTCCEEE
T ss_pred ChhhCCCHHHHHHHHHHHHHCCCCcceEEEEecccCchhhhhccHhhhccCCEEEECCCCHHHHHHHHHHHHHcCCcEEE
Confidence 999999999999999999999999 999999999988877888999999999999999999999999999999999999
Q ss_pred cCcCcccceeEEEeCcccccCCCCCCCCCCCCCcccccCCCCCcchhHHHHHHHhhhhccCChhhhhhhcCCChhhhhhh
Q 001331 641 SGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTTSM 720 (1099)
Q Consensus 641 sgt~G~~G~~~v~ip~~t~cy~c~~~p~~~~~p~Ct~~~~P~~~~Hci~wAr~~F~~lF~~~~~~~~~~l~~~~~~~~~~ 720 (1099)
+|+.|++|++++++|+.|+||.|..+|+++++|+||+++||+.++|||+|||++|+++|+..++++|+||+|| .|++.+
T Consensus 557 ~g~~G~~G~v~v~~p~~t~cy~c~~dp~~~~~P~Ctl~~~P~~~~h~i~wa~~~f~~lf~~~~~~~~~~l~~~-~~~~~~ 635 (1015)
T 3cmm_A 557 SGTLGTKGNTQVIIPRLTESYSSSRDPPEKSIPLCTLRSFPNKIDHTIAWAKSLFQGYFTDSAENVNMYLTQP-NFVEQT 635 (1015)
T ss_dssp EEEETTEEEEEEECTTTBCCGGGSCCCCCCCCCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHHHCT-THHHHH
T ss_pred eCCCccccceEEEeCCCCCccCCCCCCCCCCCCcccccCCCCCcHHHHHHHHHHHHHHHhhhhhhhhhhccCc-hhHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999 687777
Q ss_pred hhcCchhHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhhCCccccccCCCCCccCCCCCCCccccCC
Q 001331 721 ANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSS 800 (1099)
Q Consensus 721 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~c~~~a~~~f~~~F~~~i~~ll~~~p~d~~~~~g~~fWs~~kr~P~pl~fd~ 800 (1099)
.+....+. +.|+.+++.| ..+|.+|++|++||+.+|+++|+++|+|||++||+|++|++|+|||+|+||+|+||+||+
T Consensus 636 ~~~~~~~~-~~l~~~~~~l-~~~~~~~~~c~~~a~~~f~~~F~~~I~~Ll~~~p~d~~~~~g~~fW~~~kr~P~pl~fd~ 713 (1015)
T 3cmm_A 636 LKQSGDVK-GVLESISDSL-SSKPHNFEDCIKWARLEFEKKFNHDIKQLLFNFPKDAKTSNGEPFWSGAKRAPTPLEFDI 713 (1015)
T ss_dssp HC---CCH-HHHHHHHHHH-HSCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCSTTCBSSCTTCCCCCCCCCCT
T ss_pred HhccchhH-HHHHHHHHHh-hcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccccccCcccccCCCCCCCCcccCC
Confidence 66544333 7788888888 778999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHcCCCCC--CCCCChHHHHHHhhhcCCCCCCCCCCcceecccccccccccCcCcHHHHHHHH
Q 001331 801 ADPSHLHFVMAASILRAETFGIPIP--DWTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLI 878 (1099)
Q Consensus 801 ~~~~h~~fi~~~a~l~a~~~~i~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~ 878 (1099)
+|++|++||+++|+|+|++|||+.+ .|..+.+.+.++++++.+|+|.|+++++|.+++++...+..+.++.+.++.|.
T Consensus 714 ~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~ki~~~~~~~~~~~~~~~~~~~~~~l~ 793 (1015)
T 3cmm_A 714 YNNDHFHFVVAGASLRAYNYGIKSDDSNSKPNVDEYKSVIDHMIIPEFTPNANLKIQVNDDDPDPNANAANGSDEIDQLV 793 (1015)
T ss_dssp TSHHHHHHHHHHHHHHHHHHTCCCSSTTSSCCHHHHHHHHTTCCCCCCCCCSSCCCCSSTTSSCC---------CCHHHH
T ss_pred CCHHHHHHHHHHHHhHHHhcCCCCccccccCCHHHHHHHHhhCcCCCcCCccCceeccchhhhcccccccccHHHHHHHH
Confidence 9999999999999999999999985 47788999999999999999999999999988876544333333455667777
Q ss_pred HHHHHhhhcCCCCCCcCCceeeccCCCCchhHHHHHHhhhhhhccCCCCccHHHHHHHhccccchhhhhHHHHHHHHHHH
Q 001331 879 IKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 958 (1099)
Q Consensus 879 ~~l~~~~~~~~~~~~~~p~~FeKDDd~n~hidFI~aasNLRA~ny~I~~~d~~~~K~iAG~IIPAIATTtA~VaGl~~lE 958 (1099)
++|++... ..++++.|++||||||+|+|||||+|||||||+||+||++|||++|+|||||||||||||||||||+|+|
T Consensus 794 ~~l~~~~~--~~~~~~~~~~FeKDDd~n~h~dFi~aasNlRa~ny~I~~~~~~~~k~iaG~IIPAIaTT~AivaGl~~lE 871 (1015)
T 3cmm_A 794 SSLPDPST--LAGFKLEPVDFEKDDDTNHHIEFITACSNCRAQNYFIETADRQKTKFIAGRIIPAIATTTSLVTGLVNLE 871 (1015)
T ss_dssp TTSCCGGG--GTTCCCCCCCCCTTCTTSSHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred HHhccchh--cccCCCCceeeecCCCchhHHHHHHHHHHHHHHHcCCCccCHHHHHHHhCCcCccchhHHHHHHHHHHHH
Confidence 66655433 2567899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcccccccccccccCcccccCCCCCcccccCCcce-eEEeEEEcCCCCcHHHHHHHHHHc-CCceeeeecC
Q 001331 959 LYKVLDGGHKLEDYRNTFANLALPLFSMAEPVPPKVIKHRDMSW-TVWDRWILKDNPTLRELIQWLKDK-GLNAYSISCG 1036 (1099)
Q Consensus 959 l~K~l~~~~~~~~~rn~f~nla~p~~~~~eP~~~~~~~~~~~~~-t~Wd~~~v~~~~TL~~li~~~~~~-~l~~~~i~~g 1036 (1099)
+||+++|.+++++|||+|+|||+|+|.|+||.+|++.++...+| |+||||++.+++||++|+++|+++ |++++||++|
T Consensus 872 ~~K~~~~~~~~~~~kn~f~nla~~~~~~~~p~~~~~~~~~~~~~~t~wd~~~v~~~~Tl~~li~~~~~~~~~~~~~i~~~ 951 (1015)
T 3cmm_A 872 LYKLIDNKTDIEQYKNGFVNLALPFFGFSEPIASPKGEYNNKKYDKIWDRFDIKGDIKLSDLIEHFEKDEGLEITMLSYG 951 (1015)
T ss_dssp HHHHHTTCCCGGGCCEEEEETTTTEEEEECCCBCCEEEETTEEEETTTCEEEEESCCBHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHhcccchhhhhhHHHhccCCceeecCCCCCCCCCCCCCCCCeEEEEEEECCCCcHHHHHHHHHHHhCCcceeeccC
Confidence 99999987789999999999999999999999999998888999 999999999999999999999999 9999999999
Q ss_pred CceeecCCCc--chhccccCcHHHHHHHhhccCCCCceeEEEEEEEeecCCCCccccCeEEEEe
Q 001331 1037 SCLLFNSMFP--RHKERMDKKVVDLAREVAKVELPPYRRHLDVVVACEDDEDNDIDIPLISIYF 1098 (1099)
Q Consensus 1037 ~~~LY~~~~~--~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~d~~~~~v~~P~v~~~~ 1098 (1099)
+++||++++| ++++||+++|+||++.++++++|++++||+|+|+|+|++++||++|+|+|+|
T Consensus 952 ~~~ly~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~d~~~p~v~~~~ 1015 (1015)
T 3cmm_A 952 VSLLYASFFPPKKLKERLNLPITQLVKLVTKKDIPAHVSTMILEICADDKEGEDVEVPFITIHL 1015 (1015)
T ss_dssp TEEEEETTCCHHHHHHHTTSBHHHHHHHHSSSCCCSSCCEEEEEEEEECTTSCEECCCEEEEEC
T ss_pred CcEEEecCCCchhhHHhccCCHHHHHHhhccCcCCCCceEEEEEEEecCCCCCcCCCCcEEEeC
Confidence 9999999987 6789999999999999999999999999999999999989999999999986
No 2
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=100.00 E-value=1.3e-101 Score=931.49 Aligned_cols=516 Identities=25% Similarity=0.397 Sum_probs=418.5
Q ss_pred hhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHH
Q 001331 497 QISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAA 576 (1099)
Q Consensus 497 qi~l~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa 576 (1099)
|+++||.++|++|++++|+||||||+||+++++||++|| |+|+|+|+|+|+.|||||||||+.+|||++||++|+
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGV-----G~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa 77 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGF-----SHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAK 77 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHH
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHH
Confidence 889999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcccceeEEEeCc
Q 001331 577 SAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQMVIPH 656 (1099)
Q Consensus 577 ~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~~G~~~v~ip~ 656 (1099)
++++++||+++|+++..++.+.. ++.+|++++|+||+|+||+.+|++++++|+.+++|+|++|+.|+.|++++++|+
T Consensus 78 ~~L~~iNP~v~V~a~~~~i~~~~---~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 78 ESVLQFYPKANIVAYHDSIMNPD---YNVEFFRQFILVMNALDNRAARNHVNRMCLAADVPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp HHHHTTCTTCEEEEEESCTTSTT---SCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHTCCEEEEEEETTEEEEEEECTT
T ss_pred HHHHHHCCCCeEEEEecccchhh---hhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcCCCEEEEEEecccceEEEECCC
Confidence 99999999999999999886532 456889999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCcccccCCCCCcchhHHHHHHHhhhhccCCh--hhhhhhcCCChh-hhhhhhhcCchhHHHHHH
Q 001331 657 LTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTP--AEVNAYLSNPVE-YTTSMANAGDAQARDNLE 733 (1099)
Q Consensus 657 ~t~cy~c~~~p~~~~~p~Ct~~~~P~~~~Hci~wAr~~F~~lF~~~~--~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~ 733 (1099)
.|+||.|..+|+++++|+||++++|+.++|||+||+++|+++|+..+ ++++.++++|.. +... ......+..+.++
T Consensus 155 ~t~Cy~C~~~p~~~~~p~Cti~~~p~~~~hci~~a~~~f~~lf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 233 (640)
T 1y8q_B 155 VTECYECHPKPTQRTFPGATIRNTPSEPIHCIVWAKYLFNQLFGEEDADQEVSPDRADPEAAWEPT-EAEARARASNEDG 233 (640)
T ss_dssp TSCCTTSSCCCCCCCCCTTTTTSCCCSHHHHHHHHHHHHHHHHSCCCGGGCCSCCTTCTTSCCC----------------
T ss_pred CCCCcccCCCCCCcccceeeecCCCCchHHHHHHHHHHHHHHhCCcchhhhhcccccchhhhhhhh-hhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999876 334445666643 1111 1111122223344
Q ss_pred HHHHHhhhhcccchHHHHHHHHH-HHHHHHHHHHHHHhhhCCccccccCCCCCccCCCCCCCccccCCCCCchhHHHHHH
Q 001331 734 RVLECLDKEKCEIFQDCITWARL-KFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAA 812 (1099)
Q Consensus 734 ~~~~~l~~~~~~~~~~c~~~a~~-~f~~~F~~~i~~ll~~~p~d~~~~~g~~fWs~~kr~P~pl~fd~~~~~h~~fi~~~ 812 (1099)
.+... .+.+|.+|+.||+. +|+++|+++|+|||++ ++||++ ||+|+||+||..++.|....
T Consensus 234 ~~~~~----~~~~~~~~~~~a~~~~f~k~F~~~I~~Ll~~----------~~fW~~-kr~P~pl~fd~~~~~~~~~~--- 295 (640)
T 1y8q_B 234 DIKRI----STKEWAKSTGYDPVKLFTKLFKDDIRYLLTM----------DKLWRK-RKPPVPLDWAEVQSQGEETN--- 295 (640)
T ss_dssp ----------CHHHHHHTTSCHHHHHHHHHTHHHHHHTTC----------GGGCSS-SCCCCCCCHHHHHHC--------
T ss_pred HHHHH----hhhhHHHhHhHHHHHHHHHHHhhHHHHHHhC----------cccccC-CCCCCCcccCcccccccccc---
Confidence 44332 24589999999985 9999999999999984 799999 99999999998888776331
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHHHhhhcCCCCCC-CCCCcceecccccccccccCcCcHHHHHHHHHHHHHhhhcCCCC
Q 001331 813 SILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFL-PKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSG 891 (1099)
Q Consensus 813 a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~f~-~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 891 (1099)
+ + |+|. |+.+.+ +.+.+..........+.++.|.++|...
T Consensus 296 ~--------~---------------------~~~~~~~~~~~---d~~~~~~~~~~~~~~~~~~~l~~~l~~~------- 336 (640)
T 1y8q_B 296 A--------S---------------------DQQNEPQLGLK---DQQVLDVKSYARLFSKSIETLRVHLAEK------- 336 (640)
T ss_dssp --------------------------------------CCCG---GGSCCCHHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred c--------c---------------------ccccccccCCC---hhhhcChhhhhhhHHHHHHHHHHHhhhc-------
Confidence 0 0 0000 000100 0111111000000123455555555442
Q ss_pred CCcCCceeeccCCCCchhHHHHHHhhhhhhccCCCCccHHHHHHHhccccchhhhhHHHHHHHHHHHHHHHhcCCCCccc
Q 001331 892 FRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVLDGGHKLED 971 (1099)
Q Consensus 892 ~~~~p~~FeKDDd~n~hidFI~aasNLRA~ny~I~~~d~~~~K~iAG~IIPAIATTtA~VaGl~~lEl~K~l~~~~~~~~ 971 (1099)
.++.|++||||||+ |||||+|||||||+||+||++|||++|+|||||||||||||||||||+|+|+||++++ +++.
T Consensus 337 ~~~~~~~FdKDDd~--h~dFV~aaaNlRA~~y~I~~~~~~~~K~iAG~IIPAIATTnAiVaGl~~lE~~Kvl~~--~~~~ 412 (640)
T 1y8q_B 337 GDGAELIWDKDDPS--AMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAIATTNAVIAGLIVLEGLKILSG--KIDQ 412 (640)
T ss_dssp CTTCCCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHTT--CGGG
T ss_pred ccCCCcccCCCCHH--HHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcccchhhHHHHHHHHHHHHHHHHHhc--cHHh
Confidence 14789999999997 9999999999999999999999999999999999999999999999999999999997 5799
Q ss_pred ccccccccccC----cccccCCCCCccccc-CCcceeEEeEEEcCCCCcHHHHHHHH-HHc-CCceeeeec---CCceee
Q 001331 972 YRNTFANLALP----LFSMAEPVPPKVIKH-RDMSWTVWDRWILKDNPTLRELIQWL-KDK-GLNAYSISC---GSCLLF 1041 (1099)
Q Consensus 972 ~rn~f~nla~p----~~~~~eP~~~~~~~~-~~~~~t~Wd~~~v~~~~TL~~li~~~-~~~-~l~~~~i~~---g~~~LY 1041 (1099)
|||+|+|+++| +|.+++|.+|++.++ +...|++|+++.+. ++||++|+++| +++ |++++||++ |+++||
T Consensus 413 ~kn~f~n~a~~~~~~~~~~~~p~~p~~~c~vc~~~~~~~~~~~~~-~~TL~~li~~~~~~~~~l~~~~is~~~~~~~~ly 491 (640)
T 1y8q_B 413 CRTIFLNKQPNPRKKLLVPCALDPPNPNCYVCASKPEVTVRLNVH-KVTVLTLQDKIVKEKFAMVAPDVQIEDGKGTILI 491 (640)
T ss_dssp CEEEEECSSCCTTSEEEEEEECCCCCTTCTTTSSSCEEEEEECTT-TCBHHHHHHCCCCCCTCCSSCEEEESSSSCCEEE
T ss_pred hhhhheeeccCCCCcEEeecccCCCCCCCcccCCccEEEEEEeCC-CCcHHHHHHHHHHHhhCCCCceEEEEcCCCcEEE
Confidence 99999999999 999999998877663 33467899999877 89999999996 777 999999999 899999
Q ss_pred cCCCcchhccccCcHHHH-HHHhhccCCCCceeEEEEEEEeec
Q 001331 1042 NSMFPRHKERMDKKVVDL-AREVAKVELPPYRRHLDVVVACED 1083 (1099)
Q Consensus 1042 ~~~~~~~~~~l~~~l~~l-~~~~~~~~~~~~~~~~~l~~~~~d 1083 (1099)
+.+++++++||+++|+|| ++..++..+++...++.|++.|.-
T Consensus 492 ~~~~~~~~~~l~~~l~el~v~~~~~~~v~d~~~~~~~~i~~~~ 534 (640)
T 1y8q_B 492 SSEEGETEANNHKKLSEFGIRNGSRLQADDFLQDYTLLINILH 534 (640)
T ss_dssp CSSSSSSTTGGGSBGGGGTCCTTCEEEEEETTTTEEEEEEEEE
T ss_pred eccchhhHHhhhCcHHHhCccCCcEEEecCCCccEEEEEEEEe
Confidence 999888899999999995 777777777777777888888753
No 3
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=100.00 E-value=1.1e-69 Score=595.36 Aligned_cols=268 Identities=41% Similarity=0.745 Sum_probs=238.7
Q ss_pred CCCCCCCcccccCCCCCcchhHHHHHHHhhhhccCChhhhhhhcCCChhhhhhhhhcCchhHHHHHHHHHHHhhhhcccc
Q 001331 667 PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEI 746 (1099)
Q Consensus 667 p~~~~~p~Ct~~~~P~~~~Hci~wAr~~F~~lF~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~ 746 (1099)
..++++|+|||||||+.|+|||+|||++|+++|+..++++|+||+|| .|++.+.+.++.+..+.|+.+++.|...+|.+
T Consensus 9 ~~~ks~P~CTlrsfP~~i~HcI~WAr~lFe~lF~~~~~~~n~~l~dp-~~~~~~~~~~~~~~~~~l~~i~~~L~~~~p~~ 87 (276)
T 1z7l_A 9 EFEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDS-KFVERTLRLAGTQPLEVLEAVQRSLVLQRPQT 87 (276)
T ss_dssp -----CCHHHHHTCCCSHHHHHHHHHHHHHHHHTHHHHHHHHHTTCS-HHHHHHHTSSTTHHHHHHHHHHHHHTTTCCSS
T ss_pred cCCCCCceeccCCCCCChhHHHHHHHHHHHHHHcCCHHHHHHhhcCh-HHHHHHHhccchhhHHHHHHHHHHHhhcCCCc
Confidence 44678999999999999999999999999999999999999999999 78888888777777889999999998899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhCCccccccCCCCCccCCCCCCCccccCCCCCchhHHHHHHHHHHHHHcCCCCCC
Q 001331 747 FQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPD 826 (1099)
Q Consensus 747 ~~~c~~~a~~~f~~~F~~~i~~ll~~~p~d~~~~~g~~fWs~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~~i~~~~ 826 (1099)
|++|++|||.+|+++|+++|+|||++||+|++|++|++|||||||+|+||+||+.|++|++||++||+|+|++|||++.
T Consensus 88 ~~~c~~~Ar~~F~k~F~~~I~qLL~~fP~D~~t~~G~~fWsg~Kr~P~PL~fd~~~~~h~~fI~aaa~L~A~~~gi~~~- 166 (276)
T 1z7l_A 88 WGDCVTWACHHWHTQYCNNIRQLLHNFPPDQLTSSGAPFWSGPKRCPHPLTFDVNNTLHLDYVMAAANLFAQTYGLTGS- 166 (276)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHSCTTCBCTTSCBSSCSSCCCCCCCCCCTTSHHHHHHHHHHHHHHHHHTTCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCccccccCCCcccCCCCCCCCCcccCCCchHHHHHHHHHHHHHHHHcCCCCC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCChHHHHHHhhhcCCCCCCCCCCcceecccccccccccCcCcHHHHHHHHHHHHHhhhcCCCCCCcCCceeeccCCCC
Q 001331 827 WTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTN 906 (1099)
Q Consensus 827 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~p~~FeKDDd~n 906 (1099)
.+.+.+.++++++.+|+|.|+++++|.++|++....+.+. +.+.++.|.++|.+... ..++++.|++||||||+|
T Consensus 167 --~d~~~i~~~~~~~~vp~f~p~~~~ki~~~e~~~~~~~~~~-~~~~~~~L~~~l~~~~~--~~~~~~~pl~FeKDDd~N 241 (276)
T 1z7l_A 167 --QDRAAVASLLQSVQVPEFTPKSGVKIHVSDQELQSANASV-DDSRLEELKATLPSPDK--LPGFKMYPIDFEKDDDSN 241 (276)
T ss_dssp --CCHHHHHHHHHTCCCCCCCCCSSCCCCSSSCCC------C-CSHHHHHHHHHSCCGGG--STTCCCCCCCCCSSCTTS
T ss_pred --CCHHHHHHHHhcCCCCCcCCccccccccchhhhchhcccc-cHHHHHHHHHHhhhhhh--cccccCCCcceecCCCcc
Confidence 5788999999999999999999999999887765543333 34578888888766543 356789999999999999
Q ss_pred chhHHHHHHhhhhhhccCCCCccHHHHHHHhcccc
Q 001331 907 YHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRII 941 (1099)
Q Consensus 907 ~hidFI~aasNLRA~ny~I~~~d~~~~K~iAG~II 941 (1099)
+|||||+|||||||+||+||++||+++|+||||||
T Consensus 242 ~hmdFItAaSNLRA~nY~I~~~dr~~~K~IAG~II 276 (276)
T 1z7l_A 242 FHMDFIVAASNLRAENYDISPADRHKSKLIAGKII 276 (276)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCCHHHHHHHTTC--
T ss_pred cHHHHHHHHHHHHHHHcCCCcCCHHHHHHHhCCcC
Confidence 99999999999999999999999999999999998
No 4
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=7.1e-64 Score=599.89 Aligned_cols=381 Identities=25% Similarity=0.345 Sum_probs=309.4
Q ss_pred chhH-hHhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchH
Q 001331 91 DIDE-DLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNR 169 (1099)
Q Consensus 91 ~~~~-~~YsRQi~l~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~K 169 (1099)
++++ +||+||+++||.++|++|++++|+|+|+||+|+|+||||+++|||+|+|+|+|.|+.+||+||||++++|||++|
T Consensus 8 ~id~~~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGVg~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 8 KLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTCSEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred cccHHHHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 5554 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcEEEEEecCCC------hhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEeecceeEEEE
Q 001331 170 ALASVQKLQELNNAVVLSTLTSKLT------KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVF 243 (1099)
Q Consensus 170 aea~~~~L~eLNp~V~v~~~~~~l~------~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G~vf 243 (1099)
|++++++|+++||+|+|+++...++ .+++.+||+||+|.++...+..|+++|++++ +|||++++.|++|++|
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~--iplI~~~~~G~~G~v~ 165 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWNSQ--IPLLICRTYGLVGYMR 165 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTT--CCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhhhhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcC--CCEEEEEecCCeEEEE
Confidence 9999999999999999999987764 3688999999999999999999999999999 9999999999999999
Q ss_pred EEcCCceEEEcCCCCCCcc------------eeecccc---------cCCCcee---eeccccccccccC-------Cee
Q 001331 244 CDFGPEFTVVDVDGEDPHT------------GIIASIS---------NDNPALV---SCVDDERLEFQDG-------DLV 292 (1099)
Q Consensus 244 ~d~g~~~~v~d~~ge~p~~------------~~i~~I~---------~~~~~lv---~~~~~~~~~~~dg-------d~v 292 (1099)
++++ +|+++|.+|+.+.. ..+.++. ...|+++ ++++..+... +| |++
T Consensus 166 ~~~p-~~~~~d~~~~~~~~~lr~~~p~P~~~~~~~~~~~~~~~~~~~~~~p~vv~~~~ale~~k~~~-~g~~P~~~~~~~ 243 (531)
T 1tt5_A 166 IIIK-EHPVIESHPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSET-NGRIPKTYKEKE 243 (531)
T ss_dssp EECS-CEEESCCCCSSCCCCCCSSSCCHHHHHHHHTCC-------CGGGSCHHHHHHHHHHHHTTTT-CCCCCCHHHHHH
T ss_pred EEcC-CceeccCCCCCCCCcccccCCCCCchhhhhccCcccccCCCcCCchHHHHHHHHHHHHHHhc-CCCCCCchhhHH
Confidence 9998 79999998874432 1222221 1234444 3344432221 45 677
Q ss_pred EEEEe--ecc----cccCC--------------------------CCCcccccc----------------------CCce
Q 001331 293 VFSEV--HGM----TELND--------------------------GKPRKIKSA----------------------RPYS 318 (1099)
Q Consensus 293 ~f~ev--~gm----~eln~--------------------------~~~~~i~~~----------------------~~~~ 318 (1099)
.|+++ .|| .+.|. ..+.+++.. -|++
T Consensus 244 ~f~~~i~~~~~~~~~e~N~~Ea~~~~~~~~~~~~i~~~v~~~~~~~~~~~~~~~s~~Fwil~~alk~F~~~~~~g~lPl~ 323 (531)
T 1tt5_A 244 DFRDLIRQGILKPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQGNLPVR 323 (531)
T ss_dssp HHHHHHHHTTSSCTTHHHHHHHHHHHHHHSCCCCCCHHHHHHHTSHHHHSCCSSCCHHHHHHHHHHHHHHTTTTTSCCCC
T ss_pred HHHHHHHhhcccCccccchHHHHHHHHhhcCCccCcHHHHHHhcccccccccCCCchHHHHHHHHHHHHHhcCCCCCCCC
Confidence 88888 777 23221 111122221 3777
Q ss_pred eeeccccccccceeec--------------------ceEEEeeC-Ceeecccc------------------hHHhhcCCC
Q 001331 319 FTLEEDTTNYGTYVKG--------------------GIVTQVKQ-PKVLNFKP------------------LREALEDPG 359 (1099)
Q Consensus 319 f~i~~Dt~~f~~y~~g--------------------g~~~qvk~-p~~i~f~s------------------L~e~l~~p~ 359 (1099)
+.+...++....|.+. |++++++. |..++|++ |++.+..|.
T Consensus 324 g~ipDm~s~t~~Y~~lq~iy~~ka~~D~~~v~~~v~~~~~~~~~~~~~i~~~~i~~f~kn~~~l~~i~~~~l~~~~~~~~ 403 (531)
T 1tt5_A 324 GTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDT 403 (531)
T ss_dssp CCCCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSSSCHHHHHHHHHTGGGCEEECCCCHHHHHSTTT
T ss_pred CccCccccchhcccchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCCHHHHHHHHhchhhhhcccccchHhhhcccc
Confidence 7774225555556443 45556555 55555554 444444431
Q ss_pred ---CcccccCccCCCCChHHHHHHHHHHHHHHhCCCCCCCC---HHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Q 001331 360 ---DFLLSDFSKFDRPPPLHLAFQALDKFVSELGRFPVAGS---EEDAQKLISVATNINESLGDGRVEDINTKLLRHFAF 433 (1099)
Q Consensus 360 ---~~l~~d~~k~~~~~~l~~~~~al~~F~~~~gr~P~~~~---~~D~~~l~~~a~~i~~~~~~~~~~~i~~~~i~~~a~ 433 (1099)
..+..++.+.+++..+|++|||+++|.++|||+|++++ ++|+++|.+++++++.+.+. .+.+++++++++++
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~al~~f~~~~gr~P~~~~~~~~~D~~~l~~~~~~~~~~~~~--~~~~~~~~~~e~~r 481 (531)
T 1tt5_A 404 INKDEIISSMDNPDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGL--SVMVKDDYVHEFCR 481 (531)
T ss_dssp SCHHHHHHHTTSTTSTHHHHHHHHHHHHHHHHHSSCTTCSTTTHHHHHHHHHHHHHHHHHHHTC--CCCCCHHHHHHHHH
T ss_pred chhhhhhhhhhccccchHHHHHHHHHHHHHHHhCCCCCccccchHHHHHHHHHHHHHHHHhcCC--cccccHHHHHHHHH
Confidence 12566788888999999999999999999999999887 89999999999999887754 24688999999999
Q ss_pred hcccccCchhhhhhhhhhHHHHHhhcCCccccceeeeeccCCCC
Q 001331 434 GARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESL 477 (1099)
Q Consensus 434 ~~~~el~pvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~~e~l 477 (1099)
+++++|||||||+||+|||||||+|||||+||+|||||||+++.
T Consensus 482 ~~~~el~pvaA~~GGi~AQEviK~iT~q~~Pi~n~~~fDg~~~~ 525 (531)
T 1tt5_A 482 YGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQT 525 (531)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHHHHHHTCSBCCCSCEEEETTTTE
T ss_pred hcCCCcCHHHHHHHHHHHHHHHHHHcCCCccccceEEEecCCce
Confidence 99999999999999999999999999999999999999999874
No 5
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=8.5e-60 Score=539.23 Aligned_cols=320 Identities=32% Similarity=0.475 Sum_probs=272.0
Q ss_pred CCchhHhHhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccch
Q 001331 89 QTDIDEDLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKN 168 (1099)
Q Consensus 89 ~~~~~~~~YsRQi~l~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~ 168 (1099)
..+.+.+|||||+++||.++|++|++++|+|+|+||+|+|+||||+++|||+|+|+|+|.|+.+||+||||++++|+|++
T Consensus 11 l~~~~~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~ 90 (346)
T 1y8q_A 11 ISEEEAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 (346)
T ss_dssp CCHHHHHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSB
T ss_pred CCHHHHHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCC
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecCC---ChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEeecceeEEEEEE
Q 001331 169 RALASVQKLQELNNAVVLSTLTSKL---TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCD 245 (1099)
Q Consensus 169 Kaea~~~~L~eLNp~V~v~~~~~~l---~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G~vf~d 245 (1099)
||++++++|+++||+|+|+++...+ .++++.+||+||+|.++.+.+..|+++|++++ +|||++++.|++|++|+|
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~~~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~--ip~i~~~~~G~~G~v~~d 168 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEKKPESFFTQFDAVCLTCCSRDVIVKVDQICHKNS--IKFFTGDVFGYHGYTFAN 168 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGGCCHHHHTTCSEEEEESCCHHHHHHHHHHHHHTT--CEEEEEEEEBTEEEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCcchHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcC--CCEEEEeecccEEEEEEe
Confidence 9999999999999999999998877 45789999999999999999999999999999 999999999999999999
Q ss_pred cCCceEEEcCCCC--CCcceeecccccCCCceeeeccccccccccCCeeEEEEeeccccc-CCCCCccccccCCceeeec
Q 001331 246 FGPEFTVVDVDGE--DPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTEL-NDGKPRKIKSARPYSFTLE 322 (1099)
Q Consensus 246 ~g~~~~v~d~~ge--~p~~~~i~~I~~~~~~lv~~~~~~~~~~~dgd~v~f~ev~gm~el-n~~~~~~i~~~~~~~f~i~ 322 (1099)
+|+++++.+..|+ .|. |.+. +++++.++
T Consensus 169 ~~~~~~~~~~~~~~~~p~--------------------------------------~~~~~~~~~~~~~----------- 199 (346)
T 1y8q_A 169 LGEHEFVEEKTKVAKVSQ--------------------------------------GVEDGPDTKRAKL----------- 199 (346)
T ss_dssp CSEEEEEEECC---------------------------------------------------------------------
T ss_pred cCCCCEEEcCCCCcCCCc--------------------------------------ccccCCCCCcccc-----------
Confidence 9988888887663 211 1100 11111111
Q ss_pred cccccccceeecceEEEeeCCeeecccchHHhhcCCCCcccccC-ccCCCCChHHHHHHHHHHHHHHhCCCCCC-CCHHH
Q 001331 323 EDTTNYGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDF-SKFDRPPPLHLAFQALDKFVSELGRFPVA-GSEED 400 (1099)
Q Consensus 323 ~Dt~~f~~y~~gg~~~qvk~p~~i~f~sL~e~l~~p~~~l~~d~-~k~~~~~~l~~~~~al~~F~~~~gr~P~~-~~~~D 400 (1099)
|++ ++++.+++++|++|++.+..|+. ..++ .+.++++.+|++++||++|+++|||+|.+ ++++|
T Consensus 200 -d~~-----------~~~~~~~~~~f~~l~~~~~~~~~--~~~~~~~~~r~~~~~~~~~al~~f~~~~~~~P~~~~~~~d 265 (346)
T 1y8q_A 200 -DSS-----------ETTMVKKKVVFCPVKEALEVDWS--SEKAKAALKRTTSDYFLLQVLLKFRTDKGRDPSSDTYEED 265 (346)
T ss_dssp ---------------CCCEEEEEEECCCHHHHTSCCSC--SHHHHHHHTTSCTHHHHHHHHHHHHHHSSSCCCGGGHHHH
T ss_pred -cCC-----------ceEEEeceeeccCHHHHhcCCch--hhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 111 34566889999999999998742 0111 24688999999999999999999999974 67899
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhhcccccCchhhhhhhhhhHHHHHhhcCCccccceeeeeccCCCCC
Q 001331 401 AQKLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLP 478 (1099)
Q Consensus 401 ~~~l~~~a~~i~~~~~~~~~~~i~~~~i~~~a~~~~~el~pvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~~e~l~ 478 (1099)
+++|.+++.+++++.+.. ...+++++++++ .++|+|||||+||++||||||+|||||+||+||||||+++++.
T Consensus 266 ~~~l~~~a~~~~~~~~~~-~~~~~~~~~~~~----~~~l~pv~AiiGGi~aQEviK~it~k~~Pl~n~~~fD~~~~~~ 338 (346)
T 1y8q_A 266 SELLLQIRNDVLDSLGIS-PDLLPEDFVRYC----FSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGMKGNG 338 (346)
T ss_dssp HHHHHHHHHHHHHTTTCC-GGGSCGGGGGSS----CSBCHHHHHHHHHHHHHHHHHHHHTBSCCCCSEEEEETTTTEE
T ss_pred HHHHHHHHHHHHHhcCCC-cccCCHHHHHHh----cCCccHHHHHHHHHHHHHHHHHhcCCCcccccEEEEEccccce
Confidence 999999999998876532 234777777665 7899999999999999999999999999999999999999864
No 6
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=1.3e-56 Score=524.41 Aligned_cols=359 Identities=27% Similarity=0.478 Sum_probs=283.2
Q ss_pred CchhhhhhhcCHH-------------HH-HHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCC
Q 001331 492 SRYDAQISVFGAK-------------LQ-KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLS 557 (1099)
Q Consensus 492 ~Rydrqi~l~G~~-------------~q-~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLn 557 (1099)
.||+++-.+++.+ .+ ..|++++|+||||||+||+++++||++|| |+|+|+|+|+|+.|||+
T Consensus 7 ~r~~~vntl~~~~g~~~g~gf~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGv-----g~i~ivD~D~Ve~sNL~ 81 (434)
T 1tt5_B 7 GRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNLN 81 (434)
T ss_dssp TTTHHHHHHHHSCCSSCCTTCCCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTC-----CCEEEEECCBCCGGGTT
T ss_pred hhhccceEEEcCCCcccccccccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEcCCEechhccC
Confidence 5666666665433 34 56699999999999999999999999999 99999999999999999
Q ss_pred cccccccCcccchHHHHHHHHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccc---
Q 001331 558 RQFLFRDWNIGQAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF--- 634 (1099)
Q Consensus 558 RQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~--- 634 (1099)
|||||+++|||++||++|+++++++||+++|+++..++.+. +.++++++|+||+|+||+++|+++++.|+.+
T Consensus 82 RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~-----~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~ 156 (434)
T 1tt5_B 82 RQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNY 156 (434)
T ss_dssp TCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGB-----CHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCB
T ss_pred CCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchh-----hHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999888653 2578999999999999999999999999874
Q ss_pred ---------cccEEEcCcCcccceeEEEeCcccccCCCCCC--CCCCCCCcccccCCCCCcchhHHHHHHHhhhhccCCh
Q 001331 635 ---------QKPLLESGTLGAKCNTQMVIPHLTENYGASRD--PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTP 703 (1099)
Q Consensus 635 ---------~~Pli~sgt~G~~G~~~v~ip~~t~cy~c~~~--p~~~~~p~Ct~~~~P~~~~Hci~wAr~~F~~lF~~~~ 703 (1099)
++|+|++|+.|+.|++.+++|+.|+||.|..+ |+++..|.||++++|+.++|||+||+.+
T Consensus 157 ~~g~~~~~~~iPli~~~~~g~~G~v~v~~p~~t~Cy~C~~~~~p~~~~~p~Ct~~~~p~~~~h~i~~a~~i--------- 227 (434)
T 1tt5_B 157 EDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML--------- 227 (434)
T ss_dssp SSSCBCGGGCCCEEEEEEETTEEEEEEECTTTSCCGGGGGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT---------
T ss_pred cccccccccCCcEEEeccccceeEEEEECCCCCCCcccccCCCCCcCCCcccccccCCcchhHHHHHHHHH---------
Confidence 99999999999999999999999999999754 6777899999999999999999999851
Q ss_pred hhhhhhcCCChhhhhhhhhcCchhHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhhCCccccccCCC
Q 001331 704 AEVNAYLSNPVEYTTSMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGA 783 (1099)
Q Consensus 704 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~c~~~a~~~f~~~F~~~i~~ll~~~p~d~~~~~g~ 783 (1099)
.|..
T Consensus 228 ------------------------------------------------~~~~---------------------------- 231 (434)
T 1tt5_B 228 ------------------------------------------------QWPK---------------------------- 231 (434)
T ss_dssp ------------------------------------------------HHHH----------------------------
T ss_pred ------------------------------------------------HHhh----------------------------
Confidence 0100
Q ss_pred CCccCCCCCCCccccCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHhhhcCCCCCCCCCCcceecccccccc
Q 001331 784 PFWSAPKRFPHPLQFSSADPSHLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTL 863 (1099)
Q Consensus 784 ~fWs~~kr~P~pl~fd~~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~e~~~~~ 863 (1099)
..|.+
T Consensus 232 -------~~~~~-------------------------------------------------------------------- 236 (434)
T 1tt5_B 232 -------EQPFG-------------------------------------------------------------------- 236 (434)
T ss_dssp -------SCTTC--------------------------------------------------------------------
T ss_pred -------hcccc--------------------------------------------------------------------
Confidence 00000
Q ss_pred cccCcCcHHHHHHHHHHHHHhhhcCCCCCCcCCceeeccCCCCchhHHHHHHhhhhhhccCCCCccHHHHHHHhccccch
Q 001331 864 STASVDDAAVINDLIIKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPA 943 (1099)
Q Consensus 864 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~p~~FeKDDd~n~hidFI~aasNLRA~ny~I~~~d~~~~K~iAG~IIPA 943 (1099)
.|+.|++||.. |++||++.+|+||..|+|+.+++..+++++|+||||
T Consensus 237 -------------------------------~~~~~d~d~~~--~~~~v~~~a~~~~~~~gi~~~~~~~~~gv~~~iipa 283 (434)
T 1tt5_B 237 -------------------------------EGVPLDGDDPE--HIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPA 283 (434)
T ss_dssp -------------------------------TTCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHTTCCCC
T ss_pred -------------------------------cccccCCCcHH--HHHHHHHHHHHHHHHcCCCccCHHHHHhHhhccCcc
Confidence 01235555544 999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhcCCC-CcccccccccccccCcc-ccc-CCCCCcccccCCcceeEEeEEEcCCCCcHHHHH
Q 001331 944 IATSTAMATGLVCLELYKVLDGGH-KLEDYRNTFANLALPLF-SMA-EPVPPKVIKHRDMSWTVWDRWILKDNPTLRELI 1020 (1099)
Q Consensus 944 IATTtA~VaGl~~lEl~K~l~~~~-~~~~~rn~f~nla~p~~-~~~-eP~~~~~~~~~~~~~t~Wd~~~v~~~~TL~~li 1020 (1099)
||||||+|+|++++|++|+|.+.. ++..|. .|-.+....+ .+. ++.|.+ ..++ +.|+++.++.++||++|+
T Consensus 284 ia~t~aiig~l~a~EaiK~l~g~~~~l~~~l-~~d~~~~~~~~~~~~~~~~~C--~vC~---~~~~~~~~~~~~tl~~~~ 357 (434)
T 1tt5_B 284 VASTNAVIAAVCATEVFKIATSAYIPLNNYL-VFNDVDGLYTYTFEAERKENC--PACS---QLPQNIQFSPSAKLQEVL 357 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTCSCCCCSEE-EEECSBSCEEEEECCCCCTTC--TTTC---SSCBCCCC-----CTTHH
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCcccCceE-EEEcCCCceeEEEeccCCCCC--CccC---CCCceEEECCCccHHHHH
Confidence 999999999999999999999854 343321 1111111111 111 122221 1122 457888888889999999
Q ss_pred HHHHHc---CCceeeeec----CCceeecCCCc----chhccccCcHHHH
Q 001331 1021 QWLKDK---GLNAYSISC----GSCLLFNSMFP----RHKERMDKKVVDL 1059 (1099)
Q Consensus 1021 ~~~~~~---~l~~~~i~~----g~~~LY~~~~~----~~~~~l~~~l~~l 1059 (1099)
+++.++ +++.+||++ |+++||++++| ++++||+|+|+||
T Consensus 358 ~~l~~~~~~~~~~~~is~~~~~~~~~ly~~~~~~~~~~~~~~l~~~l~~l 407 (434)
T 1tt5_B 358 DYLTNSASLQMKSPAITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKEL 407 (434)
T ss_dssp HHHHHCSSCCCSSCCCEET----TEECCCCCCTTTTTTSCC-CCC-----
T ss_pred HHHhccCccceEccEEEEEccCCCcEEEecCCcchhhhhHhhhcCCHHHc
Confidence 999986 699999988 68999998865 5678999999999
No 7
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=100.00 E-value=2.4e-52 Score=528.51 Aligned_cols=357 Identities=26% Similarity=0.465 Sum_probs=295.2
Q ss_pred hhhhhhhcCHHHHHHH-hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHH
Q 001331 494 YDAQISVFGAKLQKKL-EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKS 572 (1099)
Q Consensus 494 ydrqi~l~G~~~q~~L-~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka 572 (1099)
|...-..+|.+.|+++ +++||+||||||+||+++++|+++|| |+|+|+|+|+|+.|||+|||||+.+|||++|+
T Consensus 393 ~~~~~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gv-----g~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka 467 (805)
T 2nvu_B 393 FTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGF-----RQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKA 467 (805)
T ss_dssp TSCTTCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTC-----CEEEEEECCBCCGGGGGTCTTCCGGGTTSBHH
T ss_pred CCCcccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CcEEEECCCeecccccccccccchhhcCChHH
Confidence 3333345799999988 99999999999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccc------------cccEEE
Q 001331 573 TVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF------------QKPLLE 640 (1099)
Q Consensus 573 ~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~------------~~Pli~ 640 (1099)
++++++++++||+++|+++..++.+. +.++++++|+||+|+||+++|++|++.|+.+ ++|+|+
T Consensus 468 ~~~~~~l~~~np~~~v~~~~~~~~~~-----~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~~p~i~ 542 (805)
T 2nvu_B 468 EVAAEFLNDRVPNCNVVPHFNKIQDF-----NDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLID 542 (805)
T ss_dssp HHHHHHHHHHSTTCEEEEEESCGGGS-----CHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGCCCEEE
T ss_pred HHHHHHHHHHCCCCEEEEEecccccc-----HHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccCCcEEE
Confidence 99999999999999999999988763 2578899999999999999999999999874 999999
Q ss_pred cCcCcccceeEEEeCcccccCCCCCC--CCCCCCCcccccCCCCCcchhHHHHHHHhhhhccCChhhhhhhcCCChhhhh
Q 001331 641 SGTLGAKCNTQMVIPHLTENYGASRD--PPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEVNAYLSNPVEYTT 718 (1099)
Q Consensus 641 sgt~G~~G~~~v~ip~~t~cy~c~~~--p~~~~~p~Ct~~~~P~~~~Hci~wAr~~F~~lF~~~~~~~~~~l~~~~~~~~ 718 (1099)
+|+.|+.|++.+++|+.|+||.|..+ |+....|.|+++++|+.++|||+||+.+
T Consensus 543 ~~~~g~~G~~~~~~p~~~~c~~c~~~~~p~~~~~~~c~~~~~~~~~~~~i~~a~~~------------------------ 598 (805)
T 2nvu_B 543 GGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIASMPRLPEHCIEYVRML------------------------ 598 (805)
T ss_dssp EEEETTEEEEEEECTTTSCCTTTSGGGSCCCCCCCHHHHHHCCCSHHHHHHHHHHT------------------------
T ss_pred eccccCceeEEEECCCCCCceeccCCCCCCCCCCCccccCCCCCCccHHHHHHHHh------------------------
Confidence 99999999999999999999999754 7777899999999999999999998751
Q ss_pred hhhhcCchhHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHhhhCCccccccCCCCCccCCCCCCCcccc
Q 001331 719 SMANAGDAQARDNLERVLECLDKEKCEIFQDCITWARLKFEDYFSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQF 798 (1099)
Q Consensus 719 ~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~c~~~a~~~f~~~F~~~i~~ll~~~p~d~~~~~g~~fWs~~kr~P~pl~f 798 (1099)
.|.. . +..+.
T Consensus 599 ---------------------------------~~~~-----~----------------------------~~~~~---- 608 (805)
T 2nvu_B 599 ---------------------------------QWPK-----E----------------------------QPFGE---- 608 (805)
T ss_dssp ---------------------------------HHHH-----H----------------------------CTTST----
T ss_pred ---------------------------------hccc-----c----------------------------cCCCC----
Confidence 0100 0 00011
Q ss_pred CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHhhhcCCCCCCCCCCcceecccccccccccCcCcHHHHHHHH
Q 001331 799 SSADPSHLHFVMAASILRAETFGIPIPDWTNNPKMLAEAVDKVMVPDFLPKKDAKILTDEKATTLSTASVDDAAVINDLI 878 (1099)
Q Consensus 799 d~~~~~h~~fi~~~a~l~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~ 878 (1099)
T Consensus 609 -------------------------------------------------------------------------------- 608 (805)
T 2nvu_B 609 -------------------------------------------------------------------------------- 608 (805)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhhcCCCCCCcCCceeeccCCCCchhHHHHHHhhhhhhccCCCCccHHHHHHHhccccchhhhhHHHHHHHHHHH
Q 001331 879 IKLEQCRKNLPSGFRLKPIQFEKDDDTNYHMDMIAGLANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLE 958 (1099)
Q Consensus 879 ~~l~~~~~~~~~~~~~~p~~FeKDDd~n~hidFI~aasNLRA~ny~I~~~d~~~~K~iAG~IIPAIATTtA~VaGl~~lE 958 (1099)
|+.|++||.. |++||++.+|+||..|+|+.+++..+++++|+||||||||||+|+|++++|
T Consensus 609 -----------------~~~~d~~~~~--~~~~~~~~~~~~~~~~gi~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e 669 (805)
T 2nvu_B 609 -----------------GVPLDGDDPE--HIQWIFQKSLERASQYNIRGVTYRLTQGVVKRIIPAVASTNAVIAAVCATE 669 (805)
T ss_dssp -----------------TCCCCTTCHH--HHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHH
T ss_pred -----------------cccCCCCCHH--HHHHHHHHHHHHHHHhCCCCcCHHHHHHHhcccccccchHHHHHHHHHHHH
Confidence 2335555543 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCC-CcccccccccccccCcc-ccc-CCCCCcccccCCcceeEEeEEEcCCCCcHHHHHHHHHHc---CCceee
Q 001331 959 LYKVLDGGH-KLEDYRNTFANLALPLF-SMA-EPVPPKVIKHRDMSWTVWDRWILKDNPTLRELIQWLKDK---GLNAYS 1032 (1099)
Q Consensus 959 l~K~l~~~~-~~~~~rn~f~nla~p~~-~~~-eP~~~~~~~~~~~~~t~Wd~~~v~~~~TL~~li~~~~~~---~l~~~~ 1032 (1099)
++|+|.+.. ++..+. .|-.+....+ .+. ++.|.+ ..++ +.|+++.++.++||++|+++|.++ +++.+|
T Consensus 670 ~ik~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~C--~~C~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (805)
T 2nvu_B 670 VFKIATSAYIPLNNYL-VFNDVDGLYTYTFEAERKENC--PACS---QLPQNIQFSPSAKLQEVLDYLTNSASLQMKSPA 743 (805)
T ss_dssp HHHHHHCSSCCCCSEE-EEECSBSCEEEEECCCCCTTC--TTTS---CCCEEEEECTTSBHHHHHHHHHHCTTTCCSSCE
T ss_pred HHHHHhccccccCceE-EecCCCCcccccccCCCCCCC--CeeC---ceeEEEEECCcChHHHHHHHHHhhhccCcccce
Confidence 999999853 333221 1111111111 111 112211 1122 458899999899999999999986 699999
Q ss_pred eec----CCceeecCCCcc----hhccccCcHHHH
Q 001331 1033 ISC----GSCLLFNSMFPR----HKERMDKKVVDL 1059 (1099)
Q Consensus 1033 i~~----g~~~LY~~~~~~----~~~~l~~~l~~l 1059 (1099)
|++ |+++||+.++|+ +++||+|+|+||
T Consensus 744 ~~~~~~~~~~~ly~~~~~~~~~~~~~~l~~~l~~l 778 (805)
T 2nvu_B 744 ITATLEGKNRTLYLQSVTSIEERTRPNLSKTLKEL 778 (805)
T ss_dssp EEEEETTEEEEEECCSSHHHHHHHGGGGGSBTTTT
T ss_pred EEEEccCCCcEEEecCccchhhhhHhhhcCCHHHc
Confidence 988 689999998764 678999999999
No 8
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=100.00 E-value=2e-35 Score=337.70 Aligned_cols=165 Identities=24% Similarity=0.385 Sum_probs=155.0
Q ss_pred cCchhhhhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccch
Q 001331 491 NSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQA 570 (1099)
Q Consensus 491 ~~Rydrqi~l~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~ 570 (1099)
..||+||+++||.++|++|++++|+||||||+||+++++|+++|| |+|+|+|+|.|+.+||+|||||+++|||++
T Consensus 16 ~~rY~Rq~~l~G~~~q~~L~~~~VlivG~GGlG~~ia~~La~~Gv-----g~itlvD~d~V~~sNL~rq~~~~~~diG~~ 90 (346)
T 1y8q_A 16 AAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGV-----KGLTMLDHEQVTPEDPGAQFLIRTGSVGRN 90 (346)
T ss_dssp HHHHHHHHHHHCHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCSSCGGGCTTSCSSCTTSB
T ss_pred HHHHHHHHHhhCHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEECCCcchhhCCCCCccccccCcCC
Confidence 379999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCccccee
Q 001331 571 KSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNT 650 (1099)
Q Consensus 571 Ka~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~~G~~ 650 (1099)
|+++++++++++||+++|+++...+.+. .+++++++|+||+|+|+.++|.++++.|+.+++|+|.+|+.|+.|++
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~~-----~~~~~~~~dvVv~~~d~~~~r~~ln~~~~~~~ip~i~~~~~G~~G~v 165 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEKK-----PESFFTQFDAVCLTCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYT 165 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGGC-----CHHHHTTCSEEEEESCCHHHHHHHHHHHHHTTCEEEEEEEEBTEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCcc-----hHHHhcCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEEeecccEEEE
Confidence 9999999999999999999999877642 25789999999999999999999999999999999999999999999
Q ss_pred EEEeCcccccCCCCCC
Q 001331 651 QMVIPHLTENYGASRD 666 (1099)
Q Consensus 651 ~v~ip~~t~cy~c~~~ 666 (1099)
.+.++ ...|+.|..+
T Consensus 166 ~~d~~-~~~~~~~~~~ 180 (346)
T 1y8q_A 166 FANLG-EHEFVEEKTK 180 (346)
T ss_dssp EEECS-EEEEEEECC-
T ss_pred EEecC-CCCEEEcCCC
Confidence 99887 4778877544
No 9
>1tt5_A APPBP1, amyloid protein-binding protein 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbh_A 3dbl_A 3dbr_A 1r4m_A 1r4n_A* 2nvu_A* 1yov_A 3gzn_A*
Probab=100.00 E-value=2.9e-35 Score=352.50 Aligned_cols=190 Identities=22% Similarity=0.342 Sum_probs=173.8
Q ss_pred CchhhhhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchH
Q 001331 492 SRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAK 571 (1099)
Q Consensus 492 ~Rydrqi~l~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~K 571 (1099)
.||+||+++||.++|++|++++|+||||||+||+++++|+++|| |+|+|+|+|+|+.|||+|||||+.+|||++|
T Consensus 13 ~rY~Rqi~l~G~~~q~~L~~~~VlvvG~GGlGseiak~La~aGV-----g~itlvD~D~Ve~sNL~RQ~l~~~~dvG~~K 87 (531)
T 1tt5_A 13 QKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGI-----GSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 87 (531)
T ss_dssp HHTHHHHHHHHHHHHHHHHHCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECCCBBCHHHHHHCTTCCGGGBTSBH
T ss_pred HHhhHHHHhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCC-----CeEEEEeCCEechhhcccCccCChhhcCcHH
Confidence 69999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcccceeE
Q 001331 572 STVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCNTQ 651 (1099)
Q Consensus 572 a~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~~G~~~ 651 (1099)
|++++++++++||+++|+++...+.+..+ ..++|++++|+||+|+||..+|.++++.|+.+++|+|++|+.|+.|++.
T Consensus 88 a~~a~~~l~~lNp~v~v~~~~~~~~~~~~--~~~~~~~~~DvVi~~~d~~~~r~~ln~~c~~~~iplI~~~~~G~~G~v~ 165 (531)
T 1tt5_A 88 AEAAMEFLQELNSDVSGSFVEESPENLLD--NDPSFFCRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMR 165 (531)
T ss_dssp HHHHHHHHHTTCTTSBCCEESSCHHHHHH--SCGGGGGGCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCcchhhh--hhHHHhcCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEEEecCCeEEEE
Confidence 99999999999999999999887653111 2257899999999999999999999999999999999999999999999
Q ss_pred EEeCcccccCCCCCCCCCCCCCcccccCCCCCcchhHHHH
Q 001331 652 MVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWA 691 (1099)
Q Consensus 652 v~ip~~t~cy~c~~~p~~~~~p~Ct~~~~P~~~~Hci~wA 691 (1099)
+++|. ..|+.+. |++...++|+++++|..++||-.++
T Consensus 166 ~~~p~-~~~~d~~--~~~~~~~lr~~~p~P~~~~~~~~~~ 202 (531)
T 1tt5_A 166 IIIKE-HPVIESH--PDNALEDLRLDKPFPELREHFQSYD 202 (531)
T ss_dssp EECSC-EEESCCC--CSSCCCCCCSSSCCHHHHHHHHTCC
T ss_pred EEcCC-ceeccCC--CCCCCCcccccCCCCCchhhhhccC
Confidence 99994 5566553 4456789999999999999996553
No 10
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=100.00 E-value=8.6e-34 Score=315.14 Aligned_cols=164 Identities=25% Similarity=0.419 Sum_probs=127.7
Q ss_pred Cchhhhhhh--cCH-HHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCccc
Q 001331 492 SRYDAQISV--FGA-KLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIG 568 (1099)
Q Consensus 492 ~Rydrqi~l--~G~-~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG 568 (1099)
--|+|||.| ||. ++|++|++++|+||||||+||+++++|+++|| |+|+|+|+|+||.|||+||| |+.+|||
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGV-----G~i~lvD~D~Ve~sNL~Rq~-~~~~diG 87 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGI-----GKLLLFDYDKVELANMNRLF-FQPHQAG 87 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBC-------------CCTT
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCC-----CEEEEECCCccChhhccccc-CChhhcC
Confidence 459999988 998 89999999999999999999999999999999 99999999999999999996 7899999
Q ss_pred chHHHHHHHHHHhhCCCCeEEEEecccCcccccccchhhh-----------cCCCEEEEccCchHHHHHHHhhccccccc
Q 001331 569 QAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFW-----------ENITCVINALDNVNARLYVDQRCLYFQKP 637 (1099)
Q Consensus 569 ~~Ka~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~-----------~~~DvVi~alDn~~ar~~i~~~c~~~~~P 637 (1099)
++|+++|+++++++||+++|+++..+++... + + ++|+ +++|+||+|+||+++|.++++.|+++++|
T Consensus 88 ~~Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~-~-~-~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~~P 164 (292)
T 3h8v_A 88 LSKVQAAEHTLRNINPDVLFEVHNYNITTVE-N-F-QHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELGQT 164 (292)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECCCTTSHH-H-H-HHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHHHHhhCCCcEEEEecccCCcHH-H-H-HHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhCCC
Confidence 9999999999999999999999999887521 1 1 2344 68999999999999999999999999999
Q ss_pred EEEcCcCc--ccceeEEEeCcccccCCCC
Q 001331 638 LLESGTLG--AKCNTQMVIPHLTENYGAS 664 (1099)
Q Consensus 638 li~sgt~G--~~G~~~v~ip~~t~cy~c~ 664 (1099)
+|++|+.| +.|++.+++|+.|+||.|.
T Consensus 165 li~~gv~~~~~~Gqv~~~~pg~t~Cy~Cl 193 (292)
T 3h8v_A 165 WMESGVSENAVSGHIQLIIPGESACFACA 193 (292)
T ss_dssp EEEEEECTTSSEEEEEEECTTTSCCTTSS
T ss_pred EEEeeeecceeEEEEEEECCCCCCCHhhc
Confidence 99999986 8899999999999999996
No 11
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=100.00 E-value=1.5e-32 Score=321.23 Aligned_cols=282 Identities=18% Similarity=0.245 Sum_probs=212.8
Q ss_pred hHhhhhhhccCHH-------------HHH-HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCccccc
Q 001331 95 DLHSRQLAVYGRE-------------TMR-RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVF 160 (1099)
Q Consensus 95 ~~YsRQi~l~G~e-------------~q~-kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~ 160 (1099)
.||.++.++|+.+ +++ +|++++|+|+|+||+|+++|+||+++|||+|+|+|.|.|+.+||+|||++
T Consensus 7 ~r~~~vntl~~~~g~~~g~gf~~g~e~~~~~L~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~ 86 (434)
T 1tt5_B 7 GRWNHVKKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLF 86 (434)
T ss_dssp TTTHHHHHHHHSCCSSCCTTCCCCSSHHHHHHHTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTC
T ss_pred hhhccceEEEcCCCcccccccccCHHHHHHHhcCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCC
Confidence 5666666665544 465 55999999999999999999999999999999999999999999999999
Q ss_pred CCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC---hhhccCCcEEEEecCCHHHHHHHHHHHHhc------------C
Q 001331 161 SDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT---KEQLSDFQAVVFTDISLDKAIEFDDFCHNH------------Q 225 (1099)
Q Consensus 161 ~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~---~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~------------~ 225 (1099)
+++|+|++||++++++|+++||+|+|+.+...++ .+++.+||+||+|.|+.+.+..||+.|+.. +
T Consensus 87 ~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~~~i~~~~~~~~~~~DlVi~~~Dn~~~R~~in~~c~~~~~~~~g~~~~~~~ 166 (434)
T 1tt5_B 87 RPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSI 166 (434)
T ss_dssp CGGGTTSBHHHHHHHHHHHHSTTCCCEEEESCGGGBCHHHHTTCSEEEECCSCHHHHHHHHHHHHHTCCBSSSCBCGGGC
T ss_pred ChhHcCcHHHHHHHHHHHhhCCCCEEEEEecccchhhHHHhcCCCEEEECCCCHHHHHHHHHHHHHhhhccccccccccC
Confidence 9999999999999999999999999999988764 368899999999999999999999999984 8
Q ss_pred CCceeEEEeecceeEEEEEEcCCceEEEcCCCCCCcceeecccccCCCceeeeccccccccccCCeeEEEEeecccccCC
Q 001331 226 PAISFIKAEVRGLFGSVFCDFGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELND 305 (1099)
Q Consensus 226 ~~ipfI~~~~~G~~G~vf~d~g~~~~v~d~~ge~p~~~~i~~I~~~~~~lv~~~~~~~~~~~dgd~v~f~ev~gm~eln~ 305 (1099)
+|||++++.|+.|++++..+.. .|. + .|+-+ ..
T Consensus 167 --iPli~~~~~g~~G~v~v~~p~~---------t~C------y--------~C~~~--------------------~~-- 199 (434)
T 1tt5_B 167 --VPLIDGGTEGFKGNARVILPGM---------TAC------I--------ECTLE--------------------LY-- 199 (434)
T ss_dssp --CCEEEEEEETTEEEEEEECTTT---------SCC------G--------GGGGG--------------------GS--
T ss_pred --CcEEEeccccceeEEEEECCCC---------CCC------c--------ccccC--------------------CC--
Confidence 9999999999999999876421 010 0 00000 00
Q ss_pred CCCccccccCCceeeeccccccccceeecceEEEeeCCeeecccchHHhhcCCCCcccccCccCCCCChHHHHHHHHHHH
Q 001331 306 GKPRKIKSARPYSFTLEEDTTNYGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALDKF 385 (1099)
Q Consensus 306 ~~~~~i~~~~~~~f~i~~Dt~~f~~y~~gg~~~qvk~p~~i~f~sL~e~l~~p~~~l~~d~~k~~~~~~l~~~~~al~~F 385 (1099)
| .. .....+++.. .| + ..-|.+..|..-.
T Consensus 200 --p---------------~~------------------~~~p~Ct~~~---~p------------~-~~~h~i~~a~~i~ 228 (434)
T 1tt5_B 200 --P---------------PQ------------------VNFPMCTIAS---MP------------R-LPEHCIEYVRMLQ 228 (434)
T ss_dssp --C---------------CC------------------CCCCHHHHHH---CC------------C-SHHHHHHHHHHTH
T ss_pred --C---------------Cc------------------CCCccccccc---CC------------c-chhHHHHHHHHHH
Confidence 0 00 0000011111 11 0 1123333333222
Q ss_pred HHHhCCCC-----CCCCHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhhcccccCchhhhhhhhhhHHHHHhhcC
Q 001331 386 VSELGRFP-----VAGSEEDAQKLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSG 460 (1099)
Q Consensus 386 ~~~~gr~P-----~~~~~~D~~~l~~~a~~i~~~~~~~~~~~i~~~~i~~~a~~~~~el~pvaA~iGGiaAQEVIKaiTg 460 (1099)
+++....+ ...+.++.+.+.+.++.....++. ..++...+..++....+.++|++|++||+.|||+||++||
T Consensus 229 ~~~~~~~~~~~~~d~d~~~~~~~v~~~a~~~~~~~gi---~~~~~~~~~gv~~~iipaia~t~aiig~l~a~EaiK~l~g 305 (434)
T 1tt5_B 229 WPKEQPFGEGVPLDGDDPEHIQWIFQKSLERASQYNI---RGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATS 305 (434)
T ss_dssp HHHSCTTCTTCCCCTTCHHHHHHHHHHHHHHHHHTTC---CCCCHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HhhhcccccccccCCCcHHHHHHHHHHHHHHHHHcCC---CccCHHHHHhHhhccCcccccHHHHHHHHHHHHHHHHHhC
Confidence 22221111 112466788888888888887764 3456778888888888889999999999999999999999
Q ss_pred CccccceeeeeccCCCC
Q 001331 461 KFHPLYQFFYFDSVESL 477 (1099)
Q Consensus 461 kf~PI~q~~~fD~~e~l 477 (1099)
+..|++++++||+....
T Consensus 306 ~~~~l~~~l~~d~~~~~ 322 (434)
T 1tt5_B 306 AYIPLNNYLVFNDVDGL 322 (434)
T ss_dssp CSCCCCSEEEEECSBSC
T ss_pred CCcccCceEEEEcCCCc
Confidence 99999999999998765
No 12
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.97 E-value=1.5e-32 Score=300.86 Aligned_cols=165 Identities=31% Similarity=0.473 Sum_probs=155.8
Q ss_pred cCchhhhhhh--cCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCccc
Q 001331 491 NSRYDAQISV--FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIG 568 (1099)
Q Consensus 491 ~~Rydrqi~l--~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG 568 (1099)
.+||+||+++ ||.++|++|++++|+|||+||+||+++++|+++|| |+|+|+|.|.|+.|||+||+||+.+|||
T Consensus 6 ~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gv-----g~i~lvD~d~v~~sNL~Rq~l~~~~diG 80 (251)
T 1zud_1 6 FMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGV-----GTLVLADDDDVHLSNLQRQILFTTEDID 80 (251)
T ss_dssp HHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTC-----SEEEEECCCBCCGGGTTTCTTCCGGGTT
T ss_pred HHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCC-----CeEEEEeCCCcccccCCCCccCChhhCC
Confidence 3799999999 99999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred chHHHHHHHHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcccc
Q 001331 569 QAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKC 648 (1099)
Q Consensus 569 ~~Ka~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~~G 648 (1099)
++|+++++++++++||+++|+++...+..++ . .++++++|+||+|+||..+|.++++.|+..++|+|.+++.|+.|
T Consensus 81 ~~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~--~--~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~~p~i~~~~~g~~G 156 (251)
T 1zud_1 81 RPKSQVSQQRLTQLNPDIQLTALQQRLTGEA--L--KDAVARADVVLDCTDNMATRQEINAACVALNTPLITASAVGFGG 156 (251)
T ss_dssp SBHHHHHHHHHHHHCTTSEEEEECSCCCHHH--H--HHHHHHCSEEEECCSSHHHHHHHHHHHHHTTCCEEEEEEEBTEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeccCCHHH--H--HHHHhcCCEEEECCCCHHHHHHHHHHHHHhCCCEEEEeccccce
Confidence 9999999999999999999999988876532 2 46789999999999999999999999999999999999999999
Q ss_pred eeEEEeCcc-cccCCCC
Q 001331 649 NTQMVIPHL-TENYGAS 664 (1099)
Q Consensus 649 ~~~v~ip~~-t~cy~c~ 664 (1099)
++.++.|.. ++||.|.
T Consensus 157 ~v~~~~p~~~~~c~~cl 173 (251)
T 1zud_1 157 QLMVLTPPWEQGCYRCL 173 (251)
T ss_dssp EEEEECTTCTTCCHHHH
T ss_pred EEEEEccCCCCCcEEEe
Confidence 999999987 7899884
No 13
>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1
Probab=99.97 E-value=2.6e-30 Score=327.11 Aligned_cols=276 Identities=19% Similarity=0.241 Sum_probs=212.5
Q ss_pred hhccCHHHHHHh-hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHH
Q 001331 101 LAVYGRETMRRL-FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE 179 (1099)
Q Consensus 101 i~l~G~e~q~kL-~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~e 179 (1099)
-+.+|.++|+++ ++++|+|||+||+|+++++||+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|++
T Consensus 397 ~~~~g~~~~~~~l~~~~vlvvG~GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~ 476 (805)
T 2nvu_B 397 DFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLND 476 (805)
T ss_dssp TCCCCSHHHHHHHHTCCEEEECCSSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHH
Confidence 345899999988 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcEEEEEecCCCh---hhccCCcEEEEecCCHHHHHHHHHHHHhc------------CCCceeEEEeecceeEEEEE
Q 001331 180 LNNAVVLSTLTSKLTK---EQLSDFQAVVFTDISLDKAIEFDDFCHNH------------QPAISFIKAEVRGLFGSVFC 244 (1099)
Q Consensus 180 LNp~V~v~~~~~~l~~---~~l~~~dvVV~~~~~~~~~~~ln~~c~~~------------~~~ipfI~~~~~G~~G~vf~ 244 (1099)
+||.|+|+.+...+++ +++.+||+||+|.|+.+.|..||+.|+.. + +|+|++++.|+.|++++
T Consensus 477 ~np~~~v~~~~~~~~~~~~~~~~~~d~vv~~~d~~~~r~~in~~~~~~~~~~~g~~~~~~~--~p~i~~~~~g~~G~~~~ 554 (805)
T 2nvu_B 477 RVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLISLLNYEDGVLDPSSI--VPLIDGGTEGFKGNARV 554 (805)
T ss_dssp HSTTCEEEEEESCGGGSCHHHHHTCSEEEECCSCHHHHHHHHHHHHHTCCEETTEECGGGC--CCEEEEEEETTEEEEEE
T ss_pred HCCCCEEEEEeccccccHHHHHhcCCEEEECCCCHHHHHHHHHHHHHHhhccccccccccC--CcEEEeccccCceeEEE
Confidence 9999999999887743 68899999999999999999999999984 8 99999999999999998
Q ss_pred EcCCceEEEcCCCCCCcceeecccccCCCceeeeccccccccccCCeeEEEEeecccccCCCCCccccccCCceeeeccc
Q 001331 245 DFGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEED 324 (1099)
Q Consensus 245 d~g~~~~v~d~~ge~p~~~~i~~I~~~~~~lv~~~~~~~~~~~dgd~v~f~ev~gm~eln~~~~~~i~~~~~~~f~i~~D 324 (1099)
.++..-.+ .. |.- + . .| .
T Consensus 555 ~~p~~~~c--------~~---------------c~~--------------------~-~---~p---------------~ 572 (805)
T 2nvu_B 555 ILPGMTAC--------IE---------------CTL--------------------E-L---YP---------------P 572 (805)
T ss_dssp ECTTTSCC--------TT---------------TSG--------------------G-G---SC---------------C
T ss_pred ECCCCCCc--------ee---------------ccC--------------------C-C---CC---------------C
Confidence 76431000 00 000 0 0 00 0
Q ss_pred cccccceeecceEEEeeCCeeecccchHHhhcCCCCcccccCccCCCCChHHHHHHHHHH-HHHHhCCC---C-CCCCHH
Q 001331 325 TTNYGTYVKGGIVTQVKQPKVLNFKPLREALEDPGDFLLSDFSKFDRPPPLHLAFQALDK-FVSELGRF---P-VAGSEE 399 (1099)
Q Consensus 325 t~~f~~y~~gg~~~qvk~p~~i~f~sL~e~l~~p~~~l~~d~~k~~~~~~l~~~~~al~~-F~~~~gr~---P-~~~~~~ 399 (1099)
. .....+++.. .| + ..-|.+..+..- |..++..- + ...+.+
T Consensus 573 ~------------------~~~~~c~~~~---~~------------~-~~~~~i~~a~~~~~~~~~~~~~~~~~d~~~~~ 618 (805)
T 2nvu_B 573 Q------------------VNFPMCTIAS---MP------------R-LPEHCIEYVRMLQWPKEQPFGEGVPLDGDDPE 618 (805)
T ss_dssp C------------------CCCCHHHHHH---CC------------C-SHHHHHHHHHHTHHHHHCTTSTTCCCCTTCHH
T ss_pred C------------------CCCCccccCC---CC------------C-CccHHHHHHHHhhcccccCCCCcccCCCCCHH
Confidence 0 0000111211 11 1 112222222211 22222211 1 122467
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhhcccccCchhhhhhhhhhHHHHHhhcCCccccceeeeeccCCCC
Q 001331 400 DAQKLISVATNINESLGDGRVEDINTKLLRHFAFGARAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESL 477 (1099)
Q Consensus 400 D~~~l~~~a~~i~~~~~~~~~~~i~~~~i~~~a~~~~~el~pvaA~iGGiaAQEVIKaiTgkf~PI~q~~~fD~~e~l 477 (1099)
+.+.+.+.++..+...+. ..++...+..++....+.++|++|++||+.|||+||++||+..|++|+++||+..+.
T Consensus 619 ~~~~~~~~~~~~~~~~gi---~~~~~~~~~~~~~~i~p~i~~~~aiig~~~a~e~ik~l~~~~~~l~~~~~~~~~~~~ 693 (805)
T 2nvu_B 619 HIQWIFQKSLERASQYNI---RGVTYRLTQGVVKRIIPAVASTNAVIAAVCATEVFKIATSAYIPLNNYLVFNDVDGL 693 (805)
T ss_dssp HHHHHHHHHHHHHHHTTC---CCCCHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHCSSCCCCSEEEEECSBSC
T ss_pred HHHHHHHHHHHHHHHhCC---CCcCHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhccccccCceEEecCCCCc
Confidence 788888888888887764 345677888888888889999999999999999999999999999999999998765
No 14
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.97 E-value=2.9e-31 Score=290.51 Aligned_cols=164 Identities=30% Similarity=0.448 Sum_probs=154.7
Q ss_pred Cchhhhhhh--cCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccc
Q 001331 492 SRYDAQISV--FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQ 569 (1099)
Q Consensus 492 ~Rydrqi~l--~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~ 569 (1099)
.||+||+++ ||.++|++|++++|+|||+||+|++++++|+++|+ |+|+|+|.|.|+.|||+||+||+.+|||+
T Consensus 10 ~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv-----~~i~lvD~d~v~~sNl~Rq~l~~~~diG~ 84 (249)
T 1jw9_B 10 LRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGV-----GNLTLLDFDTVSLSNLQRQTLHSDATVGQ 84 (249)
T ss_dssp HHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEECCCBCCGGGGGTCTTCCGGGTTS
T ss_pred HHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCC-----CeEEEEcCCCcccccCCcccccChhhcCc
Confidence 799999999 99999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcccce
Q 001331 570 AKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAKCN 649 (1099)
Q Consensus 570 ~Ka~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~~G~ 649 (1099)
+|++++++++.++||+++|+++...+.+++ + .++++++|+||+|+||.++|..+++.|+..++|+|.++..|+.|+
T Consensus 85 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~--~--~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g~ 160 (249)
T 1jw9_B 85 PKVESARDALTRINPHIAITPVNALLDDAE--L--AALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ 160 (249)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHH--H--HHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEeccCCHhH--H--HHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceEE
Confidence 999999999999999999999988776432 2 457899999999999999999999999999999999999999999
Q ss_pred eEEEeCcc-cccCCCC
Q 001331 650 TQMVIPHL-TENYGAS 664 (1099)
Q Consensus 650 ~~v~ip~~-t~cy~c~ 664 (1099)
+.++.|.. ++||.|.
T Consensus 161 v~~~~p~~~~~c~~c~ 176 (249)
T 1jw9_B 161 ITVFTYQDGEPCYRCL 176 (249)
T ss_dssp EEEECCCTTCCCTHHH
T ss_pred EEEEeCCCCCCceEEE
Confidence 99999987 6899884
No 15
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.97 E-value=1.8e-30 Score=297.68 Aligned_cols=166 Identities=25% Similarity=0.426 Sum_probs=152.2
Q ss_pred cCchhhhhh---hcC--HHH-HHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCccccccc
Q 001331 491 NSRYDAQIS---VFG--AKL-QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRD 564 (1099)
Q Consensus 491 ~~Rydrqi~---l~G--~~~-q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~ 564 (1099)
.+||+||+. +|| .++ |++|++++|+|||+||+||+++++|+++|| |+|+|+|.|.|+.|||+||+||+.
T Consensus 92 ~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGv-----g~i~lvD~D~Ve~sNL~Rq~l~~~ 166 (353)
T 3h5n_A 92 NNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGI-----GEIILIDNDQIENTNLTRQVLFSE 166 (353)
T ss_dssp TSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTC-----SEEEEEECCBCCGGGGGTCTTCCG
T ss_pred HHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCC-----CeEEEECCCcCcccccccccCCCh
Confidence 389999986 466 455 999999999999999999999999999999 999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchH-HHHHHHhhcccccccEEEcCc
Q 001331 565 WNIGQAKSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVN-ARLYVDQRCLYFQKPLLESGT 643 (1099)
Q Consensus 565 ~diG~~Ka~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~-ar~~i~~~c~~~~~Pli~sgt 643 (1099)
+|||++|+++++++++++||+++|+++..++.+.++ + .+ ++++|+||+|+||+. +|.++++.|+.+++|+|.+|.
T Consensus 167 ~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~-~--~~-~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~~p~i~~~~ 242 (353)
T 3h5n_A 167 DDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTD-L--HK-VPEADIWVVSADHPFNLINWVNKYCVRANQPYINAGY 242 (353)
T ss_dssp GGTTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGG-G--GG-SCCCSEEEECCCCSTTHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHCCChHHHHHHHHHHHHCCCCeEEEeecccCchhh-h--hH-hccCCEEEEecCChHHHHHHHHHHHHHhCCCEEEEEE
Confidence 999999999999999999999999999999876542 2 23 799999999999999 999999999999999999999
Q ss_pred CcccceeEE-EeCcccccCCCCC
Q 001331 644 LGAKCNTQM-VIPHLTENYGASR 665 (1099)
Q Consensus 644 ~G~~G~~~v-~ip~~t~cy~c~~ 665 (1099)
.|..|.+.. ++|+.++||.|..
T Consensus 243 ~g~~g~~g~~~~p~~~~C~~C~~ 265 (353)
T 3h5n_A 243 VNDIAVFGPLYVPGKTGCYECQK 265 (353)
T ss_dssp ETTEEEEEEEECTTTSCCTTTTC
T ss_pred eCCEEEEEEEEcCCCCCChhhcC
Confidence 999998754 5699999999963
No 16
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=99.96 E-value=2.9e-29 Score=274.93 Aligned_cols=152 Identities=27% Similarity=0.406 Sum_probs=145.3
Q ss_pred chhHhHhhhhhhc--cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccch
Q 001331 91 DIDEDLHSRQLAV--YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKN 168 (1099)
Q Consensus 91 ~~~~~~YsRQi~l--~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~ 168 (1099)
+.+.+||+||+++ ||.++|++|++++|+|+|+||+|++++++|+++|||+|+|+|.|.|+++||+|||+++++|+|++
T Consensus 3 ~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~ 82 (251)
T 1zud_1 3 DRDFMRYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRP 82 (251)
T ss_dssp HHHHHHTHHHHTSTTTHHHHHHHHHTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSB
T ss_pred HHHHHHhhhhcchhhcCHHHHHHHhcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCH
Confidence 4566899999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCcEEEEEecCCCh----hhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEeecceeEEEEE
Q 001331 169 RALASVQKLQELNNAVVLSTLTSKLTK----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFC 244 (1099)
Q Consensus 169 Kaea~~~~L~eLNp~V~v~~~~~~l~~----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G~vf~ 244 (1099)
||++++++|+++||+++|+.+...+++ +++.++|+||.|.++.+.+..++++|++++ +|||++++.|+.|++++
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~r~~l~~~~~~~~--~p~i~~~~~g~~G~v~~ 160 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLTGEALKDAVARADVVLDCTDNMATRQEINAACVALN--TPLITASAVGFGGQLMV 160 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHHCSEEEECCSSHHHHHHHHHHHHHTT--CCEEEEEEEBTEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHHhC--CCEEEEeccccceEEEE
Confidence 999999999999999999999888765 467789999999999999999999999999 99999999999999986
No 17
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=99.96 E-value=4.8e-28 Score=292.26 Aligned_cols=147 Identities=20% Similarity=0.331 Sum_probs=138.7
Q ss_pred hhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHH
Q 001331 100 QLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE 179 (1099)
Q Consensus 100 Qi~l~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~e 179 (1099)
|+++||.++|++|++++|+|||+||+|+++|+||+++|||+|+|+|.|.|+.+||+|||+++++|||++||++++++|++
T Consensus 3 qi~l~G~e~Q~kL~~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~ 82 (640)
T 1y8q_B 3 LSRGLPRELAEAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQ 82 (640)
T ss_dssp ---CCCHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHT
T ss_pred hhhhcCHHHHHHHhcCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcEEEEEecCCC-----hhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEeecceeEEEEEEcCC
Q 001331 180 LNNAVVLSTLTSKLT-----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVFCDFGP 248 (1099)
Q Consensus 180 LNp~V~v~~~~~~l~-----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G~vf~d~g~ 248 (1099)
+||+|+|+++...++ .+++.+||+||+|.++.+.+..++++|++++ +|||++++.|+.|++++..+.
T Consensus 83 iNP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~Dn~~aR~~ln~~c~~~~--iPlI~~g~~G~~G~v~vi~p~ 154 (640)
T 1y8q_B 83 FYPKANIVAYHDSIMNPDYNVEFFRQFILVMNALDNRAARNHVNRMCLAAD--VPLIESGTAGYLGQVTTIKKG 154 (640)
T ss_dssp TCTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCSCHHHHHHHHHHHHHHT--CCEEEEEEETTEEEEEEECTT
T ss_pred HCCCCeEEEEecccchhhhhHhhhcCCCEEEECCCCHHHHHHHHHHHHHcC--CCEEEEEEecccceEEEECCC
Confidence 999999999988774 3578999999999999999999999999999 999999999999999998753
No 18
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.96 E-value=6.7e-30 Score=288.08 Aligned_cols=158 Identities=19% Similarity=0.269 Sum_probs=142.5
Q ss_pred hhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHH
Q 001331 499 SVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASA 578 (1099)
Q Consensus 499 ~l~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~ 578 (1099)
++++..++++|+++||+||||||+||+++++|+++|| |+|+|+|.|+|+.|||+|||||+.+|||++|+++++++
T Consensus 22 Rll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGV-----g~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~ 96 (340)
T 3rui_A 22 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 96 (340)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCC-----CEEEEecCCEeccccccccccCChhhcChHHHHHHHHH
Confidence 6677777889999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHhhCCCCeEEEEecccCcc-------------cccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCc
Q 001331 579 ATSINPRLNIEALQNRVGPE-------------TENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLG 645 (1099)
Q Consensus 579 l~~~np~~~i~~~~~~v~~~-------------~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G 645 (1099)
++++||+++|+++...+... .++. .++++++|+||+|+||+++|.+++++|+.+++|+|+++ .|
T Consensus 97 L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l--~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~~plI~aa-~G 173 (340)
T 3rui_A 97 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRL--RALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LG 173 (340)
T ss_dssp HHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHH--HHHHHHCSEEEECCSSTGGGHHHHHHHHHTTCEEEEEE-EC
T ss_pred HHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHH--HhhhccCCEEEecCCCHHHHHHHHHHHHHcCCcEEEee-ec
Confidence 99999999999998765210 0111 46789999999999999999999999999999999876 99
Q ss_pred ccceeEEEe-------CcccccCCCC
Q 001331 646 AKCNTQMVI-------PHLTENYGAS 664 (1099)
Q Consensus 646 ~~G~~~v~i-------p~~t~cy~c~ 664 (1099)
+.|++.++. |..++||.|.
T Consensus 174 ~~G~l~v~~g~~~~~~~~~~~Cy~C~ 199 (340)
T 3rui_A 174 FDSYLVMRHGNRDEQSSKQLGCYFCH 199 (340)
T ss_dssp SSEEEEEECCCCCSSCCCCBCCGGGG
T ss_pred ceEEEEEeecccccCCCCCCCeeeeC
Confidence 999998763 5678999996
No 19
>3cmm_A Ubiquitin-activating enzyme E1 1; UBA1, protein turnover, ligase, conformationa thioester, adenylation, transthioesterification, ATP-bindin nucleotide-binding; 2.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.2e-30 Score=324.31 Aligned_cols=184 Identities=22% Similarity=0.325 Sum_probs=163.8
Q ss_pred cCchhhhhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccch
Q 001331 491 NSRYDAQISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQA 570 (1099)
Q Consensus 491 ~~Rydrqi~l~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~ 570 (1099)
..||+||+++||.++|++|++++|+||||||+||+++++|+++|| |+|+|+|.|+|+.+||+||||++.+|||++
T Consensus 7 ~~rY~Rqi~l~G~~~q~rL~~s~VlIvG~GGlGseiak~La~aGV-----g~itlvD~D~V~~sNL~RQ~l~~~~dvG~~ 81 (1015)
T 3cmm_A 7 ESLYSRQLYVLGKEAMLKMQTSNVLILGLKGLGVEIAKNVVLAGV-----KSMTVFDPEPVQLADLSTQFFLTEKDIGQK 81 (1015)
T ss_dssp HHHHHHHHHHSCHHHHHHHTTCEEEEECCSHHHHHHHHHHHHHCC-----SEEEEECCSBCCGGGGGTCTTCCGGGTTSB
T ss_pred hHhccchHhhcCHHHHHHHhcCEEEEECCChHHHHHHHHHHHcCC-----CeEEEecCCEechhhhccccccChhhcChH
Confidence 479999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccC-chHHHHHHHhhcccccccEEEcCcCcccce
Q 001331 571 KSTVAASAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALD-NVNARLYVDQRCLYFQKPLLESGTLGAKCN 649 (1099)
Q Consensus 571 Ka~vaa~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD-n~~ar~~i~~~c~~~~~Pli~sgt~G~~G~ 649 (1099)
||++++++++++||.++|+++...+++ ++++++|+||+|.| |..+|..+++.|+.+++|+|.+++.|+.|+
T Consensus 82 Ka~a~~~~L~~lNP~v~v~~~~~~l~~--------~~l~~~DvVv~~~d~~~~~r~~ln~~c~~~~iplI~~~~~G~~G~ 153 (1015)
T 3cmm_A 82 RGDVTRAKLAELNAYVPVNVLDSLDDV--------TQLSQFQVVVATDTVSLEDKVKINEFCHSSGIRFISSETRGLFGN 153 (1015)
T ss_dssp HHHHHHHHHTTSCTTSCEEECCCCCCS--------TTGGGCSEEEECTTSCHHHHHHHHHHHHHHTCEEEEEEEETTEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEecCCCCH--------HHHhcCCEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEEecccEEE
Confidence 999999999999999999999877642 57889999999999 999999999999999999999999999999
Q ss_pred eEEEeCcccccCCCCCC--CCCCCCCcccccCCCCCcchhHHHHH
Q 001331 650 TQMVIPHLTENYGASRD--PPEKQAPMCTVHSFPHNIDHCLTWAR 692 (1099)
Q Consensus 650 ~~v~ip~~t~cy~c~~~--p~~~~~p~Ct~~~~P~~~~Hci~wAr 692 (1099)
+.+. ..+||.|... +++....+|++ +-| .+.||+.|-|
T Consensus 154 v~~d---~~~~~~c~~~~~~~p~~~~i~~i-~~p-~~v~~l~~~~ 193 (1015)
T 3cmm_A 154 TFVD---LGDEFTVLDPTGEEPRTGMVSDI-EPD-GTVTMLDDNR 193 (1015)
T ss_dssp EEEE---CCSCEEESBSSCCCCCEEEEEEE-CTT-CEEEESTTCC
T ss_pred EEec---CCCceEEeeCCCCCCccccccCC-CCC-ceeEeeeccc
Confidence 8653 4678888532 22234556777 445 4688887755
No 20
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=99.95 E-value=1.1e-27 Score=261.97 Aligned_cols=153 Identities=20% Similarity=0.321 Sum_probs=145.6
Q ss_pred CchhHhHhhhhhhc--cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccc
Q 001331 90 TDIDEDLHSRQLAV--YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGK 167 (1099)
Q Consensus 90 ~~~~~~~YsRQi~l--~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk 167 (1099)
.+.+.+||+||+++ ||.++|++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+++||+||++++++|+|+
T Consensus 5 ~~~e~~ry~Rq~~l~~~g~~~q~~l~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~ 84 (249)
T 1jw9_B 5 SDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQ 84 (249)
T ss_dssp CHHHHHHTHHHHTSTTTHHHHHHHHHHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTS
T ss_pred CHHHHHHhhheecccccCHHHHHHHhCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCc
Confidence 45566899999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCCcEEEEEecCCCh----hhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEeecceeEEEE
Q 001331 168 NRALASVQKLQELNNAVVLSTLTSKLTK----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSVF 243 (1099)
Q Consensus 168 ~Kaea~~~~L~eLNp~V~v~~~~~~l~~----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G~vf 243 (1099)
+||++++++|+++||.++|+.+...+++ +++.++|+||+|.++.+.+..++++|++.+ +|+|++++.|+.|+++
T Consensus 85 ~Ka~~~~~~l~~~np~~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~--~p~i~~~~~g~~g~v~ 162 (249)
T 1jw9_B 85 PKVESARDALTRINPHIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAK--VPLVSGAAIRMEGQIT 162 (249)
T ss_dssp BHHHHHHHHHHHHCTTSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHT--CCEEEEEEEBTEEEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcC--CCEEEeeeccceEEEE
Confidence 9999999999999999999998887764 367899999999999999999999999999 9999999999999997
Q ss_pred E
Q 001331 244 C 244 (1099)
Q Consensus 244 ~ 244 (1099)
+
T Consensus 163 ~ 163 (249)
T 1jw9_B 163 V 163 (249)
T ss_dssp E
T ss_pred E
Confidence 6
No 21
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.95 E-value=2.8e-28 Score=291.02 Aligned_cols=165 Identities=19% Similarity=0.275 Sum_probs=145.8
Q ss_pred Cchhhhhhh-------cCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCccccccc
Q 001331 492 SRYDAQISV-------FGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRD 564 (1099)
Q Consensus 492 ~Rydrqi~l-------~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~ 564 (1099)
.||+|++++ ++..+|++|++++|+||||||+||+++++|+++|| |+|+|+|+|+|+.|||+||+||+.
T Consensus 301 a~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~ 375 (598)
T 3vh1_A 301 ADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNF 375 (598)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTC-----CEEEEECCSBCCTTSTTTSTTCCS
T ss_pred HHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEECCCcccccccccccccch
Confidence 679988876 56667899999999999999999999999999999 999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHhhCCCCeEEEEecccCc-------c------cccccchhhhcCCCEEEEccCchHHHHHHHhhc
Q 001331 565 WNIGQAKSTVAASAATSINPRLNIEALQNRVGP-------E------TENVFDDTFWENITCVINALDNVNARLYVDQRC 631 (1099)
Q Consensus 565 ~diG~~Ka~vaa~~l~~~np~~~i~~~~~~v~~-------~------~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c 631 (1099)
+|||++||++|+++++++||+++|+++..++.. . .+++ +++++++|+||+|+||+++|.+++++|
T Consensus 376 ~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l--~~li~~~DvVvdatDn~~tR~lin~~c 453 (598)
T 3vh1_A 376 EDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRL--RALIKEHDIIFLLVDSRESRWLPSLLS 453 (598)
T ss_dssp TTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHH--HHHHHHCSEEEECCSBGGGTHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHH--HHHHhcCCEEEECCCCHHHHHHHHHHH
Confidence 999999999999999999999999999877521 0 0111 467899999999999999999999999
Q ss_pred ccccccEEEcCcCcccceeEEEe---C----cccccCCCC
Q 001331 632 LYFQKPLLESGTLGAKCNTQMVI---P----HLTENYGAS 664 (1099)
Q Consensus 632 ~~~~~Pli~sgt~G~~G~~~v~i---p----~~t~cy~c~ 664 (1099)
+.+++|+|++ ..|+.|++.++- | ..++||.|.
T Consensus 454 ~~~~~plI~a-a~G~~Gqv~v~~g~~p~~~~~~~~Cy~Cl 492 (598)
T 3vh1_A 454 NIENKTVINA-ALGFDSYLVMRHGNRDEQSSKQLGCYFCH 492 (598)
T ss_dssp HHTTCEEEEE-EECSSEEEEEEEC--------CBCCTTTS
T ss_pred HhcCCCEEEE-EECCccEEEEEccCCCccCCCCCCceeec
Confidence 9999999985 689999987663 3 357899995
No 22
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=99.95 E-value=7.9e-28 Score=267.26 Aligned_cols=149 Identities=17% Similarity=0.296 Sum_probs=114.5
Q ss_pred hHhhhhhhc--cCH-HHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHH
Q 001331 95 DLHSRQLAV--YGR-ETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRAL 171 (1099)
Q Consensus 95 ~~YsRQi~l--~G~-e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kae 171 (1099)
--|+|||.| ||. ++|+||++++|+|||+||+|++++++|+++|||+|+|+|.|.|+.+||+||| ++++|+|++||+
T Consensus 14 ~~y~r~i~L~~~G~~~~q~kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~-~~~~diG~~Ka~ 92 (292)
T 3h8v_A 14 LVPRGSMALKRMGIVSDYEKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLF-FQPHQAGLSKVQ 92 (292)
T ss_dssp ------------------CGGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC-------------CCTTSBHHH
T ss_pred CCchHhhcccccChHHHHHHHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhccccc-CChhhcCchHHH
Confidence 359999999 998 9999999999999999999999999999999999999999999999999997 588999999999
Q ss_pred HHHHHHHHhCCCcEEEEEecCCCh-----hhc-----------cCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEee
Q 001331 172 ASVQKLQELNNAVVLSTLTSKLTK-----EQL-----------SDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 235 (1099)
Q Consensus 172 a~~~~L~eLNp~V~v~~~~~~l~~-----~~l-----------~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~ 235 (1099)
+++++|+++||+|+|+.+...+++ +++ .+||+||+|.|+++.+..||++|++++ +|||++++
T Consensus 93 aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~--~Pli~~gv 170 (292)
T 3h8v_A 93 AAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELG--QTWMESGV 170 (292)
T ss_dssp HHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHT--CCEEEEEE
T ss_pred HHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhC--CCEEEeee
Confidence 999999999999999999988864 233 689999999999999999999999999 99999999
Q ss_pred cc--eeEEEEEEc
Q 001331 236 RG--LFGSVFCDF 246 (1099)
Q Consensus 236 ~G--~~G~vf~d~ 246 (1099)
.| +.|++.+..
T Consensus 171 ~~~~~~Gqv~~~~ 183 (292)
T 3h8v_A 171 SENAVSGHIQLII 183 (292)
T ss_dssp CTTSSEEEEEEEC
T ss_pred ecceeEEEEEEEC
Confidence 86 899987654
No 23
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.95 E-value=1.8e-28 Score=292.40 Aligned_cols=160 Identities=19% Similarity=0.255 Sum_probs=141.8
Q ss_pred hhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHH
Q 001331 499 SVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASA 578 (1099)
Q Consensus 499 ~l~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~ 578 (1099)
|+++..++++|+++||+||||||+||+++++|+++|| |+|+|+|+|+|+.|||+||+||+.+|||++|+++|+++
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGV-----G~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~ 388 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGV-----RKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAAS 388 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHH
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCC-----CEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHH
Confidence 5678888899999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHhhCCCCeEEEEecccCc-------cccccc----chhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCccc
Q 001331 579 ATSINPRLNIEALQNRVGP-------ETENVF----DDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGAK 647 (1099)
Q Consensus 579 l~~~np~~~i~~~~~~v~~-------~~e~~~----~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~~ 647 (1099)
++++||+++|+++...+.. +....+ ..++++++|+||+|+||+++|.+++++|+.+++|+|+++ .|+.
T Consensus 389 L~~iNP~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~~PlI~aa-lG~~ 467 (615)
T 4gsl_A 389 LKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIENKTVINAA-LGFD 467 (615)
T ss_dssp HHHHCTTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTTCEEEEEE-ECSS
T ss_pred HHhhCCCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcCCeEEEEE-ccce
Confidence 9999999999999866521 000001 146789999999999999999999999999999999976 8999
Q ss_pred ceeEEEe-------CcccccCCCC
Q 001331 648 CNTQMVI-------PHLTENYGAS 664 (1099)
Q Consensus 648 G~~~v~i-------p~~t~cy~c~ 664 (1099)
|++.++. |+.++||.|.
T Consensus 468 Gql~v~~g~~~~~~~~~~~CY~Cl 491 (615)
T 4gsl_A 468 SYLVMRHGNRDEQSSKQLGCYFCH 491 (615)
T ss_dssp EEEEEECCC------CCCCCTTTS
T ss_pred eEEEEeecccccCCCCCCCceeeC
Confidence 9987753 4678999996
No 24
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=99.94 E-value=1.4e-26 Score=265.45 Aligned_cols=151 Identities=18% Similarity=0.294 Sum_probs=139.8
Q ss_pred chhHhHhhhhhh---ccCH--HH-HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCc
Q 001331 91 DIDEDLHSRQLA---VYGR--ET-MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDND 164 (1099)
Q Consensus 91 ~~~~~~YsRQi~---l~G~--e~-q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~d 164 (1099)
+.+.+||+||+. +||. ++ |++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++++|
T Consensus 89 ~~~~~rY~Rq~~~~~~~g~~~~~~q~~L~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~d 168 (353)
T 3h5n_A 89 STENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDD 168 (353)
T ss_dssp SCTTSTTHHHHHHHHHTTCCHHHHHHHHHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGG
T ss_pred HHHHHHhhhhhhhhhccCCChHHHHHHHhCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHH
Confidence 456789999976 4774 66 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHhCCCcEEEEEecCCChhh----ccCCcEEEEecCCHH-HHHHHHHHHHhcCCCceeEEEeeccee
Q 001331 165 IGKNRALASVQKLQELNNAVVLSTLTSKLTKEQ----LSDFQAVVFTDISLD-KAIEFDDFCHNHQPAISFIKAEVRGLF 239 (1099)
Q Consensus 165 iGk~Kaea~~~~L~eLNp~V~v~~~~~~l~~~~----l~~~dvVV~~~~~~~-~~~~ln~~c~~~~~~ipfI~~~~~G~~ 239 (1099)
+|++||++++++|+++||+|+|+.+...++++. +.+||+||+|.++.. .+..+|++|++++ +|||++++.|..
T Consensus 169 iG~~Ka~~~~~~l~~~np~v~v~~~~~~i~~~~~~~~~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~--~p~i~~~~~g~~ 246 (353)
T 3h5n_A 169 VGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEADIWVVSADHPFNLINWVNKYCVRAN--QPYINAGYVNDI 246 (353)
T ss_dssp TTSBHHHHHHHHHHHHCTTSEEEEEECCCCSGGGGGGSCCCSEEEECCCCSTTHHHHHHHHHHHTT--CCEEEEEEETTE
T ss_pred CCChHHHHHHHHHHHHCCCCeEEEeecccCchhhhhHhccCCEEEEecCChHHHHHHHHHHHHHhC--CCEEEEEEeCCE
Confidence 999999999999999999999999998875543 789999999999988 9999999999999 999999999888
Q ss_pred EEEE
Q 001331 240 GSVF 243 (1099)
Q Consensus 240 G~vf 243 (1099)
|++-
T Consensus 247 g~~g 250 (353)
T 3h5n_A 247 AVFG 250 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8763
No 25
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=99.91 E-value=1.4e-24 Score=244.70 Aligned_cols=150 Identities=16% Similarity=0.215 Sum_probs=137.4
Q ss_pred hHhhhhhhccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHH
Q 001331 95 DLHSRQLAVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASV 174 (1099)
Q Consensus 95 ~~YsRQi~l~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~ 174 (1099)
++--...|+|+..++++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++.+|+|++||++++
T Consensus 15 nl~lm~wRll~~~g~~kL~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa 94 (340)
T 3rui_A 15 NLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAA 94 (340)
T ss_dssp HHHHHHHHTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHH
T ss_pred HHHHHHHhhcchhhHHHHhCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHH
Confidence 33344558899889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCcEEEEEecCC---------------C----hhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEee
Q 001331 175 QKLQELNNAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 235 (1099)
Q Consensus 175 ~~L~eLNp~V~v~~~~~~l---------------~----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~ 235 (1099)
++|+++||.|+++.+...+ + .+++.+||+||+|+|+.+.+..+|++|++++ +|+|.+.
T Consensus 95 ~~L~~inP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn~~tR~lin~~c~~~~--~plI~aa- 171 (340)
T 3rui_A 95 ASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIEN--KTVINAA- 171 (340)
T ss_dssp HHHHHHCTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSTGGGHHHHHHHHHTT--CEEEEEE-
T ss_pred HHHHHhCCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCCHHHHHHHHHHHHHcC--CcEEEee-
Confidence 9999999999999987543 1 2468899999999999999999999999999 9999975
Q ss_pred cceeEEEEEEcC
Q 001331 236 RGLFGSVFCDFG 247 (1099)
Q Consensus 236 ~G~~G~vf~d~g 247 (1099)
.|+.|++++..|
T Consensus 172 ~G~~G~l~v~~g 183 (340)
T 3rui_A 172 LGFDSYLVMRHG 183 (340)
T ss_dssp ECSSEEEEEECC
T ss_pred ecceEEEEEeec
Confidence 999999987665
No 26
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=99.91 E-value=1.8e-24 Score=258.38 Aligned_cols=154 Identities=16% Similarity=0.190 Sum_probs=140.5
Q ss_pred CchhHhHhhhhhhc-------cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCC
Q 001331 90 TDIDEDLHSRQLAV-------YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSD 162 (1099)
Q Consensus 90 ~~~~~~~YsRQi~l-------~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~ 162 (1099)
...+-++|+||+++ ||..+|++|++++|+|+|+||+|+++|++|+++|||+|+|+|.|.|+.+||+||+++++
T Consensus 296 ~~~~la~~~~~lnL~lmrwrll~~~gq~kL~~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~ 375 (598)
T 3vh1_A 296 DPLKIADQSVDLNLKLMKWRILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNF 375 (598)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCS
T ss_pred CHHHHHHHHHhhhhhhhhhhccchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccch
Confidence 34455789999997 56678999999999999999999999999999999999999999999999999999999
Q ss_pred CcccchHHHHHHHHHHHhCCCcEEEEEecCC---------------C----hhhccCCcEEEEecCCHHHHHHHHHHHHh
Q 001331 163 NDIGKNRALASVQKLQELNNAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHN 223 (1099)
Q Consensus 163 ~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l---------------~----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~ 223 (1099)
+|+|++||++++++|+++||.|+|+++...+ + ++++.++|+||+|+++.+.|..++++|++
T Consensus 376 ~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatDn~~tR~lin~~c~~ 455 (598)
T 3vh1_A 376 EDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNI 455 (598)
T ss_dssp TTCSSBHHHHHHHHHHHHCTTCEEEEECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCSBGGGTHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHhHCCCcEEEEEeccccccCcccccccccccCHHHHHHHHhcCCEEEECCCCHHHHHHHHHHHHh
Confidence 9999999999999999999999999988654 1 24678899999999999999999999999
Q ss_pred cCCCceeEEEeecceeEEEEEEc
Q 001331 224 HQPAISFIKAEVRGLFGSVFCDF 246 (1099)
Q Consensus 224 ~~~~ipfI~~~~~G~~G~vf~d~ 246 (1099)
++ +|+|.+ +.|+.|++++-.
T Consensus 456 ~~--~plI~a-a~G~~Gqv~v~~ 475 (598)
T 3vh1_A 456 EN--KTVINA-ALGFDSYLVMRH 475 (598)
T ss_dssp TT--CEEEEE-EECSSEEEEEEE
T ss_pred cC--CCEEEE-EECCccEEEEEc
Confidence 99 999986 789999987643
No 27
>2v31_A Ubiquitin-activating enzyme E1 X; ligase, phosphorylation, catalytic domain, heteronuclear first catalytic cysteine half-domain, E1 protein; NMR {Mus musculus}
Probab=99.90 E-value=6e-25 Score=208.20 Aligned_cols=111 Identities=44% Similarity=0.879 Sum_probs=108.5
Q ss_pred EcCCceEEEcCCCCCCcceeecccccCCCceeeeccccccccccCCeeEEEEeecccccCCCCCccccccCCceeeeccc
Q 001331 245 DFGPEFTVVDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDLVVFSEVHGMTELNDGKPRKIKSARPYSFTLEED 324 (1099)
Q Consensus 245 d~g~~~~v~d~~ge~p~~~~i~~I~~~~~~lv~~~~~~~~~~~dgd~v~f~ev~gm~eln~~~~~~i~~~~~~~f~i~~D 324 (1099)
|||++|+|.|.+||+|.+++|++|+++.+++|+++++.+|+|+|||+|.|+||+||++||++++++|+++++|+|+| +|
T Consensus 1 DFG~~F~V~D~dGE~p~~~~I~~Is~~~~g~Vt~~~~~~H~l~dGD~V~FseV~GM~eLN~~~p~~i~v~~p~tf~I-~d 79 (112)
T 2v31_A 1 EFGEEMVLTDSNGEQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFVSFSEVQGMIQLNGCQPMEIKVLGPYTFSI-CD 79 (112)
T ss_dssp CCSCCCCCCCCCCSSCCEEEEEEECCSSSEEEEECTTCCCCCCTTCEEEECSEESCCTTGGGCCEEEEECSSSEEEE-SC
T ss_pred CCCCCcEEECCCCCccceeeeeeeecCCCcEEEEecCCccCCcCCCEEEEEeeEcchhhCCCcceEEEEcCCCEEEE-ec
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999 79
Q ss_pred cccccceeecceEEEeeCCeeecccchHHhhc
Q 001331 325 TTNYGTYVKGGIVTQVKQPKVLNFKPLREALE 356 (1099)
Q Consensus 325 t~~f~~y~~gg~~~qvk~p~~i~f~sL~e~l~ 356 (1099)
++.|++|++||+++|||+|++++|+||+++|.
T Consensus 80 ts~f~~Y~~GG~~tqVK~p~~~~FksL~~~l~ 111 (112)
T 2v31_A 80 TSNFSDYIRGGIVSQVKVPKKISFKSLPASLV 111 (112)
T ss_dssp CTTSCCCCEECEEECCCCCCSCCCCCCSCCSC
T ss_pred ccccccccCCeEEEEEeCCeEEcccCHHHHhh
Confidence 99999999999999999999999999999875
No 28
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=99.90 E-value=8.4e-24 Score=252.43 Aligned_cols=144 Identities=16% Similarity=0.213 Sum_probs=134.4
Q ss_pred hccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC
Q 001331 102 AVYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN 181 (1099)
Q Consensus 102 ~l~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN 181 (1099)
|+|+..++++|++++|+|||+||+|+++|++|+++|||+|+|+|.|.|+.+||+|||+++++|+|++||++++++|+++|
T Consensus 314 Rllp~~g~ekL~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN 393 (615)
T 4gsl_A 314 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF 393 (615)
T ss_dssp HTCTTCCHHHHHTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC
T ss_pred hhcchhhHHHHhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecCC---------------C----hhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEeecceeEEE
Q 001331 182 NAVVLSTLTSKL---------------T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFGSV 242 (1099)
Q Consensus 182 p~V~v~~~~~~l---------------~----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G~v 242 (1099)
|.|+|+++...+ + .+++.++|+||+|.|+.+.+..++++|++++ +|+|.+. .|+.|++
T Consensus 394 P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~~tR~~ln~~c~~~~--~PlI~aa-lG~~Gql 470 (615)
T 4gsl_A 394 PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSRESRWLPSLLSNIEN--KTVINAA-LGFDSYL 470 (615)
T ss_dssp TTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSGGGTHHHHHHHHHTT--CEEEEEE-ECSSEEE
T ss_pred CCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCHHHHHHHHHHHHHcC--CeEEEEE-ccceeEE
Confidence 999999987543 1 2467899999999999999999999999999 9999975 9999999
Q ss_pred EEEcCC
Q 001331 243 FCDFGP 248 (1099)
Q Consensus 243 f~d~g~ 248 (1099)
.+..|.
T Consensus 471 ~v~~g~ 476 (615)
T 4gsl_A 471 VMRHGN 476 (615)
T ss_dssp EEECCC
T ss_pred EEeecc
Confidence 876653
No 29
>1z7l_A Ubiquitin-activating enzyme E1 1; SCCH, second catalytic cysteine half-domain, ligase; HET: TBR; 2.80A {Mus musculus}
Probab=98.32 E-value=9.5e-07 Score=97.01 Aligned_cols=55 Identities=33% Similarity=0.470 Sum_probs=42.7
Q ss_pred HHHHHHHHhhhCCccccccCCCCCccCCCCCCCccccCCCCCc--hhHHHHHHHHHHHHHcCCCCC
Q 001331 762 FSNRVKQLIFTFPEDAATSTGAPFWSAPKRFPHPLQFSSADPS--HLHFVMAASILRAETFGIPIP 825 (1099)
Q Consensus 762 F~~~i~~ll~~~p~d~~~~~g~~fWs~~kr~P~pl~fd~~~~~--h~~fi~~~a~l~a~~~~i~~~ 825 (1099)
|.+.+++|+..+|..... .+ ....|+.|+.+|.. |++||.+||||||.+|||+..
T Consensus 207 ~~~~~~~L~~~l~~~~~~-------~~--~~~~pl~FeKDDd~N~hmdFItAaSNLRA~nY~I~~~ 263 (276)
T 1z7l_A 207 DDSRLEELKATLPSPDKL-------PG--FKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDISPA 263 (276)
T ss_dssp CSHHHHHHHHHSCCGGGS-------TT--CCCCCCCCCSSCTTSSHHHHHHHHHHHHHHHTTCCCC
T ss_pred cHHHHHHHHHHhhhhhhc-------cc--ccCCCcceecCCCcccHHHHHHHHHHHHHHHcCCCcC
Confidence 455778888877653321 11 23468999999998 999999999999999999865
No 30
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.20 E-value=0.00077 Score=71.88 Aligned_cols=96 Identities=14% Similarity=0.125 Sum_probs=72.4
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
.|++.+|||||.|.+|...++.|..+|. .|++++++... . .+.|.+- . .++...
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~------------------~----l~~l~~~-~--~i~~i~ 81 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSA------------------E----INEWEAK-G--QLRVKR 81 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCH------------------H----HHHHHHT-T--SCEEEC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCH------------------H----HHHHHHc-C--CcEEEE
Confidence 4789999999999999999999999997 79999864210 1 1222221 2 345666
Q ss_pred cCCChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEee
Q 001331 191 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 235 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~ 235 (1099)
..+.++.+.++|+||.++++.+....+.+.|+ .+ ||+-.++.
T Consensus 82 ~~~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~g--i~VNvvD~ 123 (223)
T 3dfz_A 82 KKVGEEDLLNVFFIVVATNDQAVNKFVKQHIK-ND--QLVNMASS 123 (223)
T ss_dssp SCCCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TT--CEEEC---
T ss_pred CCCCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CC--CEEEEeCC
Confidence 77788889999999999988888888999998 88 87665554
No 31
>1y8x_B Ubiquitin-activating enzyme E1C; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: c.111.1.2 PDB: 3fn1_A
Probab=97.03 E-value=0.00024 Score=65.71 Aligned_cols=52 Identities=15% Similarity=0.349 Sum_probs=45.7
Q ss_pred EEcCCCCcHHHHHHHHHHc---CCceeeeecC----CceeecCCCc----chhccccCcHHHH
Q 001331 1008 WILKDNPTLRELIQWLKDK---GLNAYSISCG----SCLLFNSMFP----RHKERMDKKVVDL 1059 (1099)
Q Consensus 1008 ~~v~~~~TL~~li~~~~~~---~l~~~~i~~g----~~~LY~~~~~----~~~~~l~~~l~~l 1059 (1099)
++++.++||++|||++.++ .+..++|+.+ .+.||....| .++.||+|+|.||
T Consensus 9 l~v~~~~TL~~lid~L~~~p~~qlk~PSltt~~~~~~k~LYmq~pp~Lee~Tr~NL~k~l~eL 71 (98)
T 1y8x_B 9 IQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEGKNRTLYMQSVTSIEERTRPNLSKTLKEL 71 (98)
T ss_dssp EECCTTCBHHHHHHHHHHCTTCCCSSCEEEEEETTEEEEEECSSCHHHHHHHHHHHHSBSGGG
T ss_pred EEECCchhHHHHHHHHHhChHhhccCCeeeeecCCCCCeEEEeCcHHHHHHhHhhhhCCHHHh
Confidence 5677789999999999996 8999999988 8999988865 4578999999999
No 32
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.88 E-value=0.0012 Score=73.08 Aligned_cols=79 Identities=20% Similarity=0.279 Sum_probs=62.6
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
.+.+++++|+|+||+|..++..|+..|+ ++|+|++.+ ..|++.+++.+...+|.++
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~-----~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~ 179 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGV-----QKLQVADLD-------------------TSRAQALADVINNAVGREA 179 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS-------------------HHHHHHHHHHHHHHHTSCC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEECC-------------------HHHHHHHHHHHHhhcCCce
Confidence 3678899999999999999999999999 899998644 2578888888888888777
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEcc
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINAL 618 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~al 618 (1099)
+..+.. +++ .+.+.++|+||||+
T Consensus 180 i~~~~~------~~l--~~~l~~~DiVInaT 202 (283)
T 3jyo_A 180 VVGVDA------RGI--EDVIAAADGVVNAT 202 (283)
T ss_dssp EEEECS------TTH--HHHHHHSSEEEECS
T ss_pred EEEcCH------HHH--HHHHhcCCEEEECC
Confidence 766541 111 23467899999996
No 33
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.81 E-value=0.0018 Score=71.58 Aligned_cols=80 Identities=16% Similarity=0.230 Sum_probs=62.1
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
.+.+++|+|+|+||+|..++..|...|+++|+|++.+ ..|++.+++.+....+.+.+....
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~-------------------~~~a~~la~~~~~~~~~~~i~~~~ 184 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLD-------------------TSRAQALADVINNAVGREAVVGVD 184 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSS-------------------HHHHHHHHHHHHHHHTSCCEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECC-------------------HHHHHHHHHHHHhhcCCceEEEcC
Confidence 4678999999999999999999999999999999754 248888889998888877776654
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
.+--.+.+.++|+||.|+.
T Consensus 185 ~~~l~~~l~~~DiVInaTp 203 (283)
T 3jyo_A 185 ARGIEDVIAAADGVVNATP 203 (283)
T ss_dssp STTHHHHHHHSSEEEECSS
T ss_pred HHHHHHHHhcCCEEEECCC
Confidence 2111234567788777663
No 34
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.78 E-value=0.0018 Score=69.05 Aligned_cols=92 Identities=14% Similarity=0.211 Sum_probs=67.5
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
.|.+++|+|||+|.+|...++.|...|. +++|+|++.- . .+.+.+. .. .
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA------~VtVvap~~~------~---------------~l~~l~~--~~--~ 76 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGA------AITVVAPTVS------A---------------EINEWEA--KG--Q 76 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCC------CEEEECSSCC------H---------------HHHHHHH--TT--S
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEECCCCC------H---------------HHHHHHH--cC--C
Confidence 4678899999999999999999999997 8999987421 0 1111111 12 2
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEE
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLL 639 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli 639 (1099)
|+.+... |.++.+.++|+||.|+|+.+....+...|. .++|+-
T Consensus 77 i~~i~~~--------~~~~dL~~adLVIaAT~d~~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 77 LRVKRKK--------VGEEDLLNVFFIVVATNDQAVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp CEEECSC--------CCGGGSSSCSEEEECCCCTHHHHHHHHHSC-TTCEEE
T ss_pred cEEEECC--------CCHhHhCCCCEEEECCCCHHHHHHHHHHHh-CCCEEE
Confidence 3333332 233456899999999999999999999998 888853
No 35
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.76 E-value=0.0027 Score=59.27 Aligned_cols=96 Identities=15% Similarity=0.113 Sum_probs=63.7
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
.++|+|+|+|++|..+++.|+..|. -+++++|.+. .|.+.++ .+.+.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~-----~~v~~~~r~~-------------------~~~~~~~------~~~~~~-- 52 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSN-----YSVTVADHDL-------------------AALAVLN------RMGVAT-- 52 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSS-----EEEEEEESCH-------------------HHHHHHH------TTTCEE--
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCCH-------------------HHHHHHH------hCCCcE--
Confidence 4589999999999999999999995 5888887531 1222221 233333
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcC
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 642 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sg 642 (1099)
+...+... +.+ .+.++++|+||+|+... ....+...|.+.++++++.+
T Consensus 53 ~~~d~~~~-~~~--~~~~~~~d~vi~~~~~~-~~~~~~~~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 53 KQVDAKDE-AGL--AKALGGFDAVISAAPFF-LTPIIAKAAKAAGAHYFDLT 100 (118)
T ss_dssp EECCTTCH-HHH--HHHTTTCSEEEECSCGG-GHHHHHHHHHHTTCEEECCC
T ss_pred EEecCCCH-HHH--HHHHcCCCEEEECCCch-hhHHHHHHHHHhCCCEEEec
Confidence 33333321 111 34567999999999543 44566778888899988644
No 36
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.69 E-value=0.0055 Score=67.30 Aligned_cols=118 Identities=14% Similarity=0.181 Sum_probs=75.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcc--cCCcccccCCCcccchHHHHHHHHHHHh-C-----C
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELW--DLSSNFVFSDNDIGKNRALASVQKLQEL-N-----N 182 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~--dL~~qf~~~~~diGk~Kaea~~~~L~eL-N-----p 182 (1099)
.|++.+|+|||+|.+|..-++.|..+|. +|+++|++....- .+. . +.... +. ++. ....+.+ | .
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga-~VtViap~~~~~l~~~~~-~-l~~~~--~~-~~~--~~~~~~~~~~~~~~~ 81 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKFG-K-FIQNK--DQ-PDY--REDAKRFINPNWDPT 81 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHHC-G-GGC----------------CEEECTTCCTT
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCCcchhHHHH-H-HHhcc--cc-ccc--cchhhcccccccccc
Confidence 3678999999999999999999999996 7999997543110 000 0 00000 00 000 0000000 0 1
Q ss_pred CcEE-EEEecCCChhhcc------CCcEEEEecCCHHHHHHHHHHHHhc---CCCceeEEEeecce
Q 001331 183 AVVL-STLTSKLTKEQLS------DFQAVVFTDISLDKAIEFDDFCHNH---QPAISFIKAEVRGL 238 (1099)
Q Consensus 183 ~V~v-~~~~~~l~~~~l~------~~dvVV~~~~~~~~~~~ln~~c~~~---~~~ipfI~~~~~G~ 238 (1099)
.-.+ ......+.++.+. ++|+||.+++..+....+.+.|++. + +|+-.++---+
T Consensus 82 ~g~i~~~i~~~~~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~--i~VNvvd~pel 145 (274)
T 1kyq_A 82 KNEIYEYIRSDFKDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQ--QLVNVADKPDL 145 (274)
T ss_dssp SCCCSEEECSSCCGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTT--SEEEETTCGGG
T ss_pred cCCeeEEEcCCCCHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCC--cEEEECCCccc
Confidence 1234 5666667777777 8999999999888888999999998 8 77755554433
No 37
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.55 E-value=0.011 Score=69.81 Aligned_cols=100 Identities=13% Similarity=0.115 Sum_probs=75.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
.|++.+|+|+|.|.+|...++.|..+|. .++++|++... .++++-..-.++...
T Consensus 9 ~l~~~~vlVvGgG~va~~k~~~L~~~ga-~V~vi~~~~~~-------------------------~~~~l~~~~~i~~~~ 62 (457)
T 1pjq_A 9 QLRDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIP-------------------------QFTVWANEGMLTLVE 62 (457)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCH-------------------------HHHHHHTTTSCEEEE
T ss_pred ECCCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEcCCCCH-------------------------HHHHHHhcCCEEEEE
Confidence 3678999999999999999999999996 89999974211 112221112456666
Q ss_pred cCCChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEeecce
Q 001331 191 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGL 238 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~ 238 (1099)
..+.++.+.++++||.+++.......+.+.|++.+ ||+-.++--.+
T Consensus 63 ~~~~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~--i~vn~~d~~e~ 108 (457)
T 1pjq_A 63 GPFDETLLDSCWLAIAATDDDTVNQRVSDAAESRR--IFCNVVDAPKA 108 (457)
T ss_dssp SSCCGGGGTTCSEEEECCSCHHHHHHHHHHHHHTT--CEEEETTCTTS
T ss_pred CCCCccccCCccEEEEcCCCHHHHHHHHHHHHHcC--CEEEECCCccc
Confidence 77778888999999999988877888999999999 88644444333
No 38
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.19 E-value=0.043 Score=53.26 Aligned_cols=93 Identities=15% Similarity=0.159 Sum_probs=63.3
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
+...+|+|+|+|.+|..+++.|...|. .++++|.+. .++ +.+.+. .+ .+...
T Consensus 4 ~~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~-------------------~~~----~~~~~~--~~--~~~~g 55 (141)
T 3llv_A 4 NGRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSK-------------------EKI----ELLEDE--GF--DAVIA 55 (141)
T ss_dssp --CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH-------------------HHH----HHHHHT--TC--EEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCH-------------------HHH----HHHHHC--CC--cEEEC
Confidence 345789999999999999999999997 788988632 122 223222 22 23333
Q ss_pred CCC-hhh-----ccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEe
Q 001331 192 KLT-KEQ-----LSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAE 234 (1099)
Q Consensus 192 ~l~-~~~-----l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~ 234 (1099)
+.+ ++. +.++|+||.+..+.+....+...+++.+ .+.|.+.
T Consensus 56 d~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~--~~~iia~ 102 (141)
T 3llv_A 56 DPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVS--DVYAIVR 102 (141)
T ss_dssp CTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHC--CCCEEEE
T ss_pred CCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhC--CceEEEE
Confidence 332 222 4578999999988887788888898887 5555443
No 39
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.13 E-value=0.023 Score=52.72 Aligned_cols=89 Identities=20% Similarity=0.163 Sum_probs=61.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
..+|+|+|+|++|..+++.|...|..+++++|.+. .+++. +. .+.+.+ ...++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~-------------------~~~~~----~~--~~~~~~--~~~d~ 57 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL-------------------AALAV----LN--RMGVAT--KQVDA 57 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH-------------------HHHHH----HH--TTTCEE--EECCT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH-------------------HHHHH----HH--hCCCcE--EEecC
Confidence 45899999999999999999999977899988531 12222 22 233333 22333
Q ss_pred Ch-----hhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEE
Q 001331 194 TK-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 232 (1099)
Q Consensus 194 ~~-----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~ 232 (1099)
.. +.+.++|+||.+. +......+.+.|.+.+ ++++.
T Consensus 58 ~~~~~~~~~~~~~d~vi~~~-~~~~~~~~~~~~~~~g--~~~~~ 98 (118)
T 3ic5_A 58 KDEAGLAKALGGFDAVISAA-PFFLTPIIAKAAKAAG--AHYFD 98 (118)
T ss_dssp TCHHHHHHHTTTCSEEEECS-CGGGHHHHHHHHHHTT--CEEEC
T ss_pred CCHHHHHHHHcCCCEEEECC-CchhhHHHHHHHHHhC--CCEEE
Confidence 21 3567899999887 4445567888899998 77664
No 40
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.92 E-value=0.044 Score=54.29 Aligned_cols=103 Identities=17% Similarity=0.129 Sum_probs=62.7
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccc--cCCCcccchHHHHHHHHHHHhCCCcEE
Q 001331 109 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFV--FSDNDIGKNRALASVQKLQELNNAVVL 186 (1099)
Q Consensus 109 q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~--~~~~diGk~Kaea~~~~L~eLNp~V~v 186 (1099)
-+++.+.+|+|+|+|.+|..+++.|...|. .++++|.+.-....+...+- .-..|... . +.|.
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~~d~~~--~----~~l~-------- 78 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVVGDAAE--F----ETLK-------- 78 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEESCTTS--H----HHHH--------
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEEecCCC--H----HHHH--------
Confidence 356778899999999999999999999997 89999976433222220000 00001000 0 0011
Q ss_pred EEEecCCChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEee
Q 001331 187 STLTSKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 235 (1099)
Q Consensus 187 ~~~~~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~ 235 (1099)
...+.++|+||.|..+......+...++..++ ...|.+.+
T Consensus 79 --------~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~~~~-~~~iv~~~ 118 (155)
T 2g1u_A 79 --------ECGMEKADMVFAFTNDDSTNFFISMNARYMFN-VENVIARV 118 (155)
T ss_dssp --------TTTGGGCSEEEECSSCHHHHHHHHHHHHHTSC-CSEEEEEC
T ss_pred --------HcCcccCCEEEEEeCCcHHHHHHHHHHHHHCC-CCeEEEEE
Confidence 11255789999999887777777788887332 44444333
No 41
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.86 E-value=0.023 Score=55.15 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=60.4
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
...+|+|+|+|.+|..+++.|...|. +++++|.|. .+.+. +.+. .. .
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~------~V~~id~~~-------------------~~~~~----~~~~--~~--~ 51 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGK------KVLAVDKSK-------------------EKIEL----LEDE--GF--D 51 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEESCH-------------------HHHHH----HHHT--TC--E
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC------eEEEEECCH-------------------HHHHH----HHHC--CC--c
Confidence 45689999999999999999999998 899998642 12222 2221 22 2
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhccccccc
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKP 637 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~P 637 (1099)
.+...... +..+...-..++|+||.++++......+...++..+.+
T Consensus 52 ~~~gd~~~--~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 52 AVIADPTD--ESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp EEECCTTC--HHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred EEECCCCC--HHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 23333222 11111112468999999999988888777777765543
No 42
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.82 E-value=0.023 Score=54.67 Aligned_cols=88 Identities=15% Similarity=0.165 Sum_probs=55.4
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEE
Q 001331 110 RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 189 (1099)
Q Consensus 110 ~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~ 189 (1099)
.++...+|+|+|+|++|..+++.|...|. +++++|.+.-....+ ++. ... ..
T Consensus 2 ~~~~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~-----------------------~~~--~~~--~~ 53 (144)
T 2hmt_A 2 GRIKNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAY-----------------------ASY--ATH--AV 53 (144)
T ss_dssp ----CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTT-----------------------TTT--CSE--EE
T ss_pred CCCcCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH-----------------------HHh--CCE--EE
Confidence 35667899999999999999999999997 688888643211111 111 111 11
Q ss_pred ecCC-Chh-----hccCCcEEEEecCC-HHHHHHHHHHHHhcC
Q 001331 190 TSKL-TKE-----QLSDFQAVVFTDIS-LDKAIEFDDFCHNHQ 225 (1099)
Q Consensus 190 ~~~l-~~~-----~l~~~dvVV~~~~~-~~~~~~ln~~c~~~~ 225 (1099)
..+. +.+ .+.++|+||.+..+ ......+...+++.+
T Consensus 54 ~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 96 (144)
T 2hmt_A 54 IANATEENELLSLGIRNFEYVIVAIGANIQASTLTTLLLKELD 96 (144)
T ss_dssp ECCTTCHHHHHTTTGGGCSEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred EeCCCCHHHHHhcCCCCCCEEEECCCCchHHHHHHHHHHHHcC
Confidence 1111 111 25678999998875 355567778888888
No 43
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.69 E-value=0.027 Score=55.86 Aligned_cols=94 Identities=15% Similarity=0.227 Sum_probs=57.7
Q ss_pred HHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCC
Q 001331 506 QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 585 (1099)
Q Consensus 506 q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~ 585 (1099)
-+++.+.+|+|+|+|.+|..+++.|...|. +++++|.+.-....+.+.. .
T Consensus 14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~------~V~vid~~~~~~~~~~~~~------------------------g 63 (155)
T 2g1u_A 14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH------SVVVVDKNEYAFHRLNSEF------------------------S 63 (155)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCGGGGGGSCTTC------------------------C
T ss_pred hcccCCCcEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHHHHHHHHhcC------------------------C
Confidence 356677899999999999999999999997 8999987642222221000 1
Q ss_pred CeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhccc
Q 001331 586 LNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY 633 (1099)
Q Consensus 586 ~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~ 633 (1099)
.. .+...... ...+...-+.++|+||.|+.+......+...+..
T Consensus 64 ~~--~~~~d~~~--~~~l~~~~~~~ad~Vi~~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 64 GF--TVVGDAAE--FETLKECGMEKADMVFAFTNDDSTNFFISMNARY 107 (155)
T ss_dssp SE--EEESCTTS--HHHHHTTTGGGCSEEEECSSCHHHHHHHHHHHHH
T ss_pred Cc--EEEecCCC--HHHHHHcCcccCCEEEEEeCCcHHHHHHHHHHHH
Confidence 11 11111110 0011111146799999999998877777666654
No 44
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.66 E-value=0.023 Score=63.53 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=54.6
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
+.+++|+|+|+||.|..++..|...|+++|+|++.+.- ...||+.+++.+.+..+ +.+.....
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~----------------~~~~a~~la~~~~~~~~-~~v~~~~~ 208 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDD----------------FFEKAVAFAKRVNENTD-CVVTVTDL 208 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------HHHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCc----------------hHHHHHHHHHHhhhccC-cceEEech
Confidence 56889999999999999999999999999999975310 02478888887766543 33333321
Q ss_pred C-CC--hhhccCCcEEEEec
Q 001331 192 K-LT--KEQLSDFQAVVFTD 208 (1099)
Q Consensus 192 ~-l~--~~~l~~~dvVV~~~ 208 (1099)
. +. .+.+.++|+||.|+
T Consensus 209 ~~l~~~~~~l~~~DiIINaT 228 (312)
T 3t4e_A 209 ADQHAFTEALASADILTNGT 228 (312)
T ss_dssp TCHHHHHHHHHHCSEEEECS
T ss_pred HhhhhhHhhccCceEEEECC
Confidence 1 10 23345667666655
No 45
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.60 E-value=0.029 Score=62.83 Aligned_cols=80 Identities=13% Similarity=0.215 Sum_probs=56.0
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
+++++|+|+|+||+|..++..|...|+++|+|++.+.- -..||+.+++.+.+..+ +.+....-
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~----------------~~~~a~~la~~~~~~~~-~~~~~~~~ 214 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDD----------------FYANAEKTVEKINSKTD-CKAQLFDI 214 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSST----------------THHHHHHHHHHHHHHSS-CEEEEEET
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCc----------------hHHHHHHHHHHhhhhcC-CceEEecc
Confidence 57889999999999999999999999999999975410 02478888888876543 44444321
Q ss_pred C-CC--hhhccCCcEEEEec
Q 001331 192 K-LT--KEQLSDFQAVVFTD 208 (1099)
Q Consensus 192 ~-l~--~~~l~~~dvVV~~~ 208 (1099)
. .+ .+.+.++|+||.|+
T Consensus 215 ~~~~~l~~~l~~aDiIINaT 234 (315)
T 3tnl_A 215 EDHEQLRKEIAESVIFTNAT 234 (315)
T ss_dssp TCHHHHHHHHHTCSEEEECS
T ss_pred chHHHHHhhhcCCCEEEECc
Confidence 1 11 12345677777665
No 46
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.52 E-value=0.03 Score=61.31 Aligned_cols=74 Identities=31% Similarity=0.306 Sum_probs=59.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
++.++|+|+|+||.+..++-.|...|+++|+|++.+ ..|++.+++.+....+...+....
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~~~~~- 182 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPS-------------------TARMGAVCELLGNGFPGLTVSTQF- 182 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEEESCC-
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC-------------------HHHHHHHHHHHhccCCcceehhhh-
Confidence 467899999999999999999999999999998742 248999999998888876654322
Q ss_pred CCChhhccCCcEEEEecC
Q 001331 192 KLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~~ 209 (1099)
+.+.++|+||.|+.
T Consensus 183 ----~~~~~~dliiNaTp 196 (269)
T 3tum_A 183 ----SGLEDFDLVANASP 196 (269)
T ss_dssp ----SCSTTCSEEEECSS
T ss_pred ----hhhhcccccccCCc
Confidence 23457899988763
No 47
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.41 E-value=0.024 Score=54.56 Aligned_cols=37 Identities=19% Similarity=0.434 Sum_probs=30.4
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
++...+|+|+|+|.+|..+++.|...|. +++++|.+.
T Consensus 3 ~~~~~~v~I~G~G~iG~~~a~~l~~~g~------~v~~~d~~~ 39 (144)
T 2hmt_A 3 RIKNKQFAVIGLGRFGGSIVKELHRMGH------EVLAVDINE 39 (144)
T ss_dssp ---CCSEEEECCSHHHHHHHHHHHHTTC------CCEEEESCH
T ss_pred CCcCCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCH
Confidence 3566789999999999999999999997 688888653
No 48
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.35 E-value=0.016 Score=63.69 Aligned_cols=110 Identities=20% Similarity=0.333 Sum_probs=67.6
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCc--ccccccCcccchHHHHHH-HHHHh-hC
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSR--QFLFRDWNIGQAKSTVAA-SAATS-IN 583 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnR--Qflf~~~diG~~Ka~vaa-~~l~~-~n 583 (1099)
.|++++|+|||+|.+|...++.|...|. +++|+|++.-+. +.. +-+.. +-+. .+. ...++ ++
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga------~VtViap~~~~~--l~~~~~~l~~--~~~~----~~~~~~~~~~~~ 75 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGC------KLTLVSPDLHKS--IIPKFGKFIQ--NKDQ----PDYREDAKRFIN 75 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTC------EEEEEEEEECTT--HHHHHCGGGC-----------------CEEEC
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCC------EEEEEcCCCCcc--hhHHHHHHHh--cccc----ccccchhhcccc
Confidence 3567899999999999999999999997 899999764210 100 00000 0000 000 00000 11
Q ss_pred CC-----CeE-EEEecccCcccccccchhhhc------CCCEEEEccCchHHHHHHHhhcccc---cccEE
Q 001331 584 PR-----LNI-EALQNRVGPETENVFDDTFWE------NITCVINALDNVNARLYVDQRCLYF---QKPLL 639 (1099)
Q Consensus 584 p~-----~~i-~~~~~~v~~~~e~~~~~~~~~------~~DvVi~alDn~~ar~~i~~~c~~~---~~Pli 639 (1099)
+. -.| +.+...+ .+..+. ++|+||.|+|+.+....+...|... ++|+-
T Consensus 76 ~~~~~~~g~i~~~i~~~~--------~~~dL~~l~~~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VN 138 (274)
T 1kyq_A 76 PNWDPTKNEIYEYIRSDF--------KDEYLDLENENDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVN 138 (274)
T ss_dssp TTCCTTSCCCSEEECSSC--------CGGGGCCSSTTCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEE
T ss_pred cccccccCCeeEEEcCCC--------CHHHHhhcccCCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEE
Confidence 11 123 3333322 233344 8999999999999999999999998 88774
No 49
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.24 E-value=0.028 Score=59.40 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=29.6
Q ss_pred HHHHhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 506 QKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 506 q~~L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..+|.+++|+|.|+ |+||.++++.|+..|. ++++++.+
T Consensus 16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~------~V~~~~R~ 54 (236)
T 3e8x_A 16 NLYFQGMRVLVVGANGKVARYLLSELKNKGH------EPVAMVRN 54 (236)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred ccCcCCCeEEEECCCChHHHHHHHHHHhCCC------eEEEEECC
Confidence 46788999999997 9999999999999997 78888743
No 50
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.24 E-value=0.02 Score=56.65 Aligned_cols=96 Identities=9% Similarity=-0.005 Sum_probs=64.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh-CCCcEEEEEe
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLT 190 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL-Np~V~v~~~~ 190 (1099)
|.+.+|+|+|+|.+|..+++.|...|. .++++|.+.- .+++ .+.+. ...+.+ ..
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~------------------~~~~----~~~~~~~~~~~~--i~ 55 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPE------------------DDIK----QLEQRLGDNADV--IP 55 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCH------------------HHHH----HHHHHHCTTCEE--EE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCCh------------------HHHH----HHHHhhcCCCeE--EE
Confidence 356789999999999999999999996 7899886321 1222 22222 223333 33
Q ss_pred cCCC-h-----hhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEE
Q 001331 191 SKLT-K-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 233 (1099)
Q Consensus 191 ~~l~-~-----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~ 233 (1099)
.+.+ + ..+.++|+||++..+......+...+++.++ ...|.+
T Consensus 56 gd~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~-~~~ii~ 103 (153)
T 1id1_A 56 GDSNDSSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDMSS-DVKTVL 103 (153)
T ss_dssp SCTTSHHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHHTS-SSCEEE
T ss_pred cCCCCHHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHHCC-CCEEEE
Confidence 3332 2 2367899999999888878888888998743 334443
No 51
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=95.17 E-value=0.031 Score=62.67 Aligned_cols=83 Identities=17% Similarity=0.119 Sum_probs=58.3
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
+.+++++|+|+||+|..++..|+..|+ .+|+|++.+. --..|++.+++.+....+ ..+
T Consensus 152 l~gk~~lVlGaGG~g~aia~~L~~~Ga-----~~V~i~nR~~----------------~~~~~a~~la~~~~~~~~-~~~ 209 (315)
T 3tnl_A 152 IIGKKMTICGAGGAATAICIQAALDGV-----KEISIFNRKD----------------DFYANAEKTVEKINSKTD-CKA 209 (315)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSS----------------TTHHHHHHHHHHHHHHSS-CEE
T ss_pred ccCCEEEEECCChHHHHHHHHHHHCCC-----CEEEEEECCC----------------chHHHHHHHHHHhhhhcC-Cce
Confidence 678899999999999999999999999 8999986431 002477778887776654 455
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEcc
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINAL 618 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~al 618 (1099)
....- .. .+.+ .+...++|+||||+
T Consensus 210 ~~~~~--~~-~~~l--~~~l~~aDiIINaT 234 (315)
T 3tnl_A 210 QLFDI--ED-HEQL--RKEIAESVIFTNAT 234 (315)
T ss_dssp EEEET--TC-HHHH--HHHHHTCSEEEECS
T ss_pred EEecc--ch-HHHH--HhhhcCCCEEEECc
Confidence 44421 11 0111 23457899999996
No 52
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.14 E-value=0.04 Score=63.86 Aligned_cols=103 Identities=18% Similarity=0.229 Sum_probs=69.1
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
++|+|+|+|++|..+++.|+..|-.. ..++++|.+ ..|++.+++.+....+ .++..+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~---~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~ 58 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVF---SHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDIT 58 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTC---CEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCc---eEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEE
Confidence 48999999999999999999987200 277777643 2466666666654331 234444
Q ss_pred ecccCcccccccchhhhcC--CCEEEEccCchHHHHHHHhhcccccccEEEc
Q 001331 592 QNRVGPETENVFDDTFWEN--ITCVINALDNVNARLYVDQRCLYFQKPLLES 641 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~--~DvVi~alDn~~ar~~i~~~c~~~~~Pli~s 641 (1099)
...+... +.+ .+.+++ .|+||+|+.... ...+...|.+.++.+++.
T Consensus 59 ~~D~~d~-~~l--~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g~~vvD~ 106 (405)
T 4ina_A 59 TVDADSI-EEL--VALINEVKPQIVLNIALPYQ-DLTIMEACLRTGVPYLDT 106 (405)
T ss_dssp ECCTTCH-HHH--HHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHTCCEEES
T ss_pred EecCCCH-HHH--HHHHHhhCCCEEEECCCccc-ChHHHHHHHHhCCCEEEe
Confidence 4444432 112 344555 899999987654 456777999999999974
No 53
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=95.01 E-value=0.047 Score=64.06 Aligned_cols=102 Identities=15% Similarity=0.187 Sum_probs=66.3
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcC-CCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMG-VSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~G-v~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
..||+|||+|++|+.++..|++.+ +- -..|+++|.|.. ++. + .+.+ .+++.
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~---~~~I~vaD~~~~----------------~~~---~-~~~~-----g~~~~ 64 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIK---PSQVTIIAAEGT----------------KVD---V-AQQY-----GVSFK 64 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCC---GGGEEEEESSCC----------------SCC---H-HHHH-----TCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCc---eeEEEEeccchh----------------hhh---H-Hhhc-----CCcee
Confidence 468999999999999999999864 40 158899885542 110 0 1111 23333
Q ss_pred EEecccCcccc-cccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcC
Q 001331 590 ALQNRVGPETE-NVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTL 644 (1099)
Q Consensus 590 ~~~~~v~~~~e-~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~ 644 (1099)
...++.++. ..+ ..++++.|+|||+...... ..+-+.|.+.++.+|+....
T Consensus 65 --~~~Vdadnv~~~l-~aLl~~~DvVIN~s~~~~~-l~Im~acleaGv~YlDTa~E 116 (480)
T 2ph5_A 65 --LQQITPQNYLEVI-GSTLEENDFLIDVSIGISS-LALIILCNQKGALYINAATE 116 (480)
T ss_dssp --ECCCCTTTHHHHT-GGGCCTTCEEEECCSSSCH-HHHHHHHHHHTCEEEESSCC
T ss_pred --EEeccchhHHHHH-HHHhcCCCEEEECCccccC-HHHHHHHHHcCCCEEECCCC
Confidence 334443321 111 2345556999999877755 45667999999999987764
No 54
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=94.97 E-value=0.041 Score=60.22 Aligned_cols=73 Identities=19% Similarity=0.289 Sum_probs=57.2
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
+.+++++|+|+||.+..++..|+..|+ .+|+|++.+ ..|++.+++.+....|.+.+
T Consensus 123 ~~~~~~lilGaGGaarai~~aL~~~g~-----~~i~i~nRt-------------------~~ra~~la~~~~~~~~~~~~ 178 (269)
T 3tum_A 123 PAGKRALVIGCGGVGSAIAYALAEAGI-----ASITLCDPS-------------------TARMGAVCELLGNGFPGLTV 178 (269)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSC-------------------HHHHHHHHHHHHHHCTTCEE
T ss_pred cccCeEEEEecHHHHHHHHHHHHHhCC-----CeEEEeCCC-------------------HHHHHHHHHHHhccCCccee
Confidence 467899999999999999999999999 899997522 34788889988888876654
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEcc
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINAL 618 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~al 618 (1099)
.... .-++++|+||||+
T Consensus 179 ~~~~-------------~~~~~~dliiNaT 195 (269)
T 3tum_A 179 STQF-------------SGLEDFDLVANAS 195 (269)
T ss_dssp ESCC-------------SCSTTCSEEEECS
T ss_pred hhhh-------------hhhhcccccccCC
Confidence 3211 1246789999996
No 55
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.92 E-value=0.04 Score=64.93 Aligned_cols=92 Identities=17% Similarity=0.150 Sum_probs=67.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
|++++|+|||.|.+|...++.|...|. +++|+|.+.-+ .+.+ +.. .. .|
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga------~V~vi~~~~~~---------------------~~~~-l~~-~~--~i 58 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGA------RLTVNALTFIP---------------------QFTV-WAN-EG--ML 58 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTB------EEEEEESSCCH---------------------HHHH-HHT-TT--SC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcC------EEEEEcCCCCH---------------------HHHH-HHh-cC--CE
Confidence 567899999999999999999999997 89999974211 0111 111 11 33
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEE
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLL 639 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli 639 (1099)
+.+...+ .+..+.++|+||.|+|+......+...|...++|+-
T Consensus 59 ~~~~~~~--------~~~~l~~~~lVi~at~~~~~n~~i~~~a~~~~i~vn 101 (457)
T 1pjq_A 59 TLVEGPF--------DETLLDSCWLAIAATDDDTVNQRVSDAAESRRIFCN 101 (457)
T ss_dssp EEEESSC--------CGGGGTTCSEEEECCSCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEECCC--------CccccCCccEEEEcCCCHHHHHHHHHHHHHcCCEEE
Confidence 4443332 234467899999999999888889999999999963
No 56
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.89 E-value=0.039 Score=62.96 Aligned_cols=94 Identities=14% Similarity=0.156 Sum_probs=61.9
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
++.||+|+|||.+|..+++.|+.. ..++++|.+. .+. .+..+.+.
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~-------~~v~~~~~~~-------------------~~~-------~~~~~~~~-- 59 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE-------FDVYIGDVNN-------------------ENL-------EKVKEFAT-- 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-------SEEEEEESCH-------------------HHH-------HHHTTTSE--
T ss_pred CccEEEEECCCHHHHHHHHHHhcC-------CCeEEEEcCH-------------------HHH-------HHHhccCC--
Confidence 456899999999999999998642 4677776331 121 12222222
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcC
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 642 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sg 642 (1099)
.+...+.. .+.+ .++++++|+||+|+... ....+.+.|.+.++.+++..
T Consensus 60 ~~~~d~~d-~~~l--~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 60 PLKVDASN-FDKL--VEVMKEFELVIGALPGF-LGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp EEECCTTC-HHHH--HHHHTTCSEEEECCCGG-GHHHHHHHHHHHTCEEEECC
T ss_pred cEEEecCC-HHHH--HHHHhCCCEEEEecCCc-ccchHHHHHHhcCcceEeee
Confidence 22223322 1222 45678999999999765 34568899999999999854
No 57
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.83 E-value=0.027 Score=53.99 Aligned_cols=89 Identities=15% Similarity=0.154 Sum_probs=54.3
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
.+|+|+|+|.+|..+++.|...|. +++++|.+.- +.+ .+.+.. ++. .+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~------~v~~~d~~~~-------------------~~~----~~~~~~-~~~--~~ 52 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH------DIVLIDIDKD-------------------ICK----KASAEI-DAL--VI 52 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEEESCHH-------------------HHH----HHHHHC-SSE--EE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHH-------------------HHH----HHHHhc-CcE--EE
Confidence 589999999999999999999997 7888885321 111 121111 222 22
Q ss_pred ecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccc
Q 001331 592 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF 634 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~ 634 (1099)
...... ...+......++|+||.|+.+......+...+...
T Consensus 53 ~~d~~~--~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~ 93 (140)
T 1lss_A 53 NGDCTK--IKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSY 93 (140)
T ss_dssp ESCTTS--HHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHT
T ss_pred EcCCCC--HHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHc
Confidence 222211 11111122568999999998876666665555543
No 58
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.80 E-value=0.063 Score=53.01 Aligned_cols=94 Identities=9% Similarity=0.114 Sum_probs=61.1
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
.+.+|+|+|+|.+|..+++.|...|. .++++|.|.- .+++.+++. ...++.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~------~V~vid~~~~------------------~~~~~~~~~---~~~~~~-- 52 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQ------NVTVISNLPE------------------DDIKQLEQR---LGDNAD-- 52 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC------CEEEEECCCH------------------HHHHHHHHH---HCTTCE--
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC------CEEEEECCCh------------------HHHHHHHHh---hcCCCe--
Confidence 35689999999999999999999997 8999986521 011111211 112233
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccc
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF 634 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~ 634 (1099)
.+...... ...+...-++++|+||.++++......+...++..
T Consensus 53 ~i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~ 95 (153)
T 1id1_A 53 VIPGDSND--SSVLKKAGIDRCRAILALSDNDADNAFVVLSAKDM 95 (153)
T ss_dssp EEESCTTS--HHHHHHHTTTTCSEEEECSSCHHHHHHHHHHHHHH
T ss_pred EEEcCCCC--HHHHHHcChhhCCEEEEecCChHHHHHHHHHHHHH
Confidence 33333322 12222233678999999999988888877777665
No 59
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.80 E-value=0.18 Score=48.95 Aligned_cols=90 Identities=18% Similarity=0.265 Sum_probs=60.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
+.+|+|+|+|.+|..+++.|...|. .++++|.+.- ++ +.+++ ..+.+ ...+.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~-------------------~~----~~~~~--~g~~~--i~gd~ 58 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRT-------------------RV----DELRE--RGVRA--VLGNA 58 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHH-------------------HH----HHHHH--TTCEE--EESCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHH--cCCCE--EECCC
Confidence 4589999999999999999999997 7999986431 22 23333 23332 33333
Q ss_pred -Chh-----hccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeE
Q 001331 194 -TKE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 231 (1099)
Q Consensus 194 -~~~-----~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI 231 (1099)
+++ -+.++|+||++..+......+...+++.++.+..|
T Consensus 59 ~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~~~ii 102 (140)
T 3fwz_A 59 ANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPDIEII 102 (140)
T ss_dssp TSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCCCeEE
Confidence 222 24678999999887766666667778775434433
No 60
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.75 E-value=0.15 Score=48.67 Aligned_cols=84 Identities=13% Similarity=0.109 Sum_probs=55.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC-
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL- 193 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l- 193 (1099)
.+|+|+|+|.+|..+++.|...|. +++++|.+.- +++ .+.+.. .+. ....+.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~-------------------~~~----~~~~~~-~~~--~~~~d~~ 57 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKD-------------------ICK----KASAEI-DAL--VINGDCT 57 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HHH----HHHHHC-SSE--EEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHH-------------------HHH----HHHHhc-CcE--EEEcCCC
Confidence 589999999999999999999995 7999885321 222 222211 222 222222
Q ss_pred Ch-----hhccCCcEEEEecCCHHHHHHHHHHHHhcC
Q 001331 194 TK-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQ 225 (1099)
Q Consensus 194 ~~-----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~ 225 (1099)
+. ..+.++|+||.+..+......+...++..+
T Consensus 58 ~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 58 KIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYG 94 (140)
T ss_dssp SHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcC
Confidence 11 225689999999887666666777888877
No 61
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=94.63 E-value=0.048 Score=59.80 Aligned_cols=72 Identities=21% Similarity=0.232 Sum_probs=52.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe-
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT- 190 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~- 190 (1099)
+.+++|+|+|+||+|..++..|...|+++|+|++.+. .|++.+++.+.. ..+....
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~-------------------~~a~~la~~~~~----~~~~~~~~ 174 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM-------------------AKALALRNELDH----SRLRISRY 174 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH-------------------HHHHHHHHHHCC----TTEEEECS
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH-------------------HHHHHHHHHhcc----CCeeEeeH
Confidence 5788999999999999999999999999999987432 377777766643 1233322
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
.++.. .++|+||.|+.
T Consensus 175 ~~l~~---~~~DivInaTp 190 (272)
T 3pwz_A 175 EALEG---QSFDIVVNATS 190 (272)
T ss_dssp GGGTT---CCCSEEEECSS
T ss_pred HHhcc---cCCCEEEECCC
Confidence 11211 57899888874
No 62
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.63 E-value=0.062 Score=54.61 Aligned_cols=87 Identities=9% Similarity=0.013 Sum_probs=58.8
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvla-GVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.+. .+++ .+++.. +.+ ..
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~-------------------~~~~----~~~~~g--~~~--~~ 88 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIRE-------------------EAAQ----QHRSEG--RNV--IS 88 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCH-------------------HHHH----HHHHTT--CCE--EE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCH-------------------HHHH----HHHHCC--CCE--EE
Confidence 4577999999999999999999999 97 688888533 1222 233332 222 11
Q ss_pred cCC-Ch----h--hccCCcEEEEecCCHHHHHHHHHHHHhcCC
Q 001331 191 SKL-TK----E--QLSDFQAVVFTDISLDKAIEFDDFCHNHQP 226 (1099)
Q Consensus 191 ~~l-~~----~--~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~ 226 (1099)
.+. ++ + .+.++|+||++..+......+-..+++.++
T Consensus 89 gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~~ 131 (183)
T 3c85_A 89 GDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRNY 131 (183)
T ss_dssp CCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred cCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHCC
Confidence 222 11 1 256789999988877766666677888764
No 63
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=94.51 E-value=0.067 Score=59.81 Aligned_cols=83 Identities=8% Similarity=0.091 Sum_probs=57.0
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
+.+++++|+|+||.|..++..|+..|+ .+|+|++.+. -...|++.+++.+....+ ..+
T Consensus 146 l~gk~~lVlGAGGaaraia~~L~~~G~-----~~v~v~nRt~----------------~~~~~a~~la~~~~~~~~-~~v 203 (312)
T 3t4e_A 146 MRGKTMVLLGAGGAATAIGAQAAIEGI-----KEIKLFNRKD----------------DFFEKAVAFAKRVNENTD-CVV 203 (312)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-----SEEEEEECSS----------------THHHHHHHHHHHHHHHSS-CEE
T ss_pred cCCCEEEEECcCHHHHHHHHHHHHcCC-----CEEEEEECCC----------------chHHHHHHHHHHhhhccC-cce
Confidence 567899999999999999999999999 8999885330 013467778877776543 344
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEcc
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINAL 618 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~al 618 (1099)
..+.. .+ .+.. .+.+.++|+||||+
T Consensus 204 ~~~~~--~~-l~~~--~~~l~~~DiIINaT 228 (312)
T 3t4e_A 204 TVTDL--AD-QHAF--TEALASADILTNGT 228 (312)
T ss_dssp EEEET--TC-HHHH--HHHHHHCSEEEECS
T ss_pred EEech--Hh-hhhh--HhhccCceEEEECC
Confidence 44321 10 0000 23457899999997
No 64
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=94.49 E-value=0.069 Score=58.81 Aligned_cols=73 Identities=14% Similarity=0.201 Sum_probs=53.6
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
+.+++|+|+|+||.|..++..|...|+++|+|++.+ ..|++.+++.+.... . +....
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~-------------------~~~a~~la~~~~~~~-~--~~~~~- 180 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQPASITVTNRT-------------------FAKAEQLAELVAAYG-E--VKAQA- 180 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESS-------------------HHHHHHHHHHHGGGS-C--EEEEE-
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECC-------------------HHHHHHHHHHhhccC-C--eeEee-
Confidence 578999999999999999999999999999999753 237777777765542 2 23221
Q ss_pred CCChhhccCCcEEEEecC
Q 001331 192 KLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~~ 209 (1099)
++ +...++|+||.|+.
T Consensus 181 -~~-~l~~~aDiIInaTp 196 (281)
T 3o8q_A 181 -FE-QLKQSYDVIINSTS 196 (281)
T ss_dssp -GG-GCCSCEEEEEECSC
T ss_pred -HH-HhcCCCCEEEEcCc
Confidence 11 12268899998875
No 65
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.44 E-value=0.023 Score=55.66 Aligned_cols=40 Identities=20% Similarity=0.361 Sum_probs=32.6
Q ss_pred HHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 504 KLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 504 ~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
....+....+|+|+|+|++|..+++.|...|+ . ++++|.+
T Consensus 14 ~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-----~-v~v~~r~ 53 (144)
T 3oj0_A 14 DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-----K-VTVAGRN 53 (144)
T ss_dssp HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-----E-EEEEESC
T ss_pred HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-----E-EEEEcCC
Confidence 33344458899999999999999999999888 5 8888743
No 66
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=94.32 E-value=0.024 Score=64.67 Aligned_cols=88 Identities=14% Similarity=0.162 Sum_probs=57.9
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
++.||+|+|+|.+|..+++.|... ..+++.|.+ ..+ +.++.+.+... .-+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~-------------------~~~-------~~~~~~~~~~~--~~d 64 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVN-------------------NEN-------LEKVKEFATPL--KVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESC-------------------HHH-------HHHHTTTSEEE--ECC
T ss_pred CccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcC-------------------HHH-------HHHHhccCCcE--EEe
Confidence 455799999999999999998643 577776632 112 22333333221 112
Q ss_pred CC-----hhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEE
Q 001331 193 LT-----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKA 233 (1099)
Q Consensus 193 l~-----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~ 233 (1099)
++ .+.++++|+||.|..+. ....+.+.|.+.+ +.+++.
T Consensus 65 ~~d~~~l~~~~~~~DvVi~~~p~~-~~~~v~~~~~~~g--~~yvD~ 107 (365)
T 3abi_A 65 ASNFDKLVEVMKEFELVIGALPGF-LGFKSIKAAIKSK--VDMVDV 107 (365)
T ss_dssp TTCHHHHHHHHTTCSEEEECCCGG-GHHHHHHHHHHHT--CEEEEC
T ss_pred cCCHHHHHHHHhCCCEEEEecCCc-ccchHHHHHHhcC--cceEee
Confidence 22 24678999999887544 4567889999999 887763
No 67
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.21 E-value=0.13 Score=57.20 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=30.8
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
...+|.|||+|.+|..++++|+..|...|+++|.+
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 35689999999999999999999998789999864
No 68
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.11 E-value=0.24 Score=55.59 Aligned_cols=77 Identities=14% Similarity=0.117 Sum_probs=53.7
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC----CCcEE
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVL 186 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN----p~V~v 186 (1099)
+|+..+|.|+|+|.+|..++..|+..|.++++|+|-+. .|++.....|+..+ ..++|
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~v 64 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE-------------------GTPQGKGLDIAESSPVDGFDAKF 64 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHHTCCCCE
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc-------------------hhHHHHHHHHhchhhhcCCCCEE
Confidence 35678999999999999999999999988899998532 23443334444433 24555
Q ss_pred EEEecCCChhhccCCcEEEEecC
Q 001331 187 STLTSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 187 ~~~~~~l~~~~l~~~dvVV~~~~ 209 (1099)
..... .+-+.+.|+||.+..
T Consensus 65 ~~t~d---~~a~~~aDiVIiaag 84 (324)
T 3gvi_A 65 TGAND---YAAIEGADVVIVTAG 84 (324)
T ss_dssp EEESS---GGGGTTCSEEEECCS
T ss_pred EEeCC---HHHHCCCCEEEEccC
Confidence 54332 257889999999853
No 69
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.01 E-value=0.047 Score=53.43 Aligned_cols=71 Identities=18% Similarity=0.192 Sum_probs=49.7
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
...+|+|+|+|++|..+++.|...|+. ++++|.+. .|++...+.+. +.+... ..
T Consensus 20 ~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~-------------------~~~~~~a~~~~-----~~~~~~-~~ 73 (144)
T 3oj0_A 20 GGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNI-------------------DHVRAFAEKYE-----YEYVLI-ND 73 (144)
T ss_dssp CCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCH-------------------HHHHHHHHHHT-----CEEEEC-SC
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCH-------------------HHHHHHHHHhC-----CceEee-cC
Confidence 389999999999999999999999987 99988532 24444444332 232221 11
Q ss_pred CChhhccCCcEEEEecCC
Q 001331 193 LTKEQLSDFQAVVFTDIS 210 (1099)
Q Consensus 193 l~~~~l~~~dvVV~~~~~ 210 (1099)
..+.+.++|+||.|+..
T Consensus 74 -~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 74 -IDSLIKNNDVIITATSS 90 (144)
T ss_dssp -HHHHHHTCSEEEECSCC
T ss_pred -HHHHhcCCCEEEEeCCC
Confidence 23456789999998764
No 70
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.88 E-value=0.081 Score=55.46 Aligned_cols=88 Identities=13% Similarity=0.120 Sum_probs=58.2
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
.+|+|+|+|.+|..+++.|...|. .++++|.|.= +++.++ +. .+. ..+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~------~v~vid~~~~-------------------~~~~l~----~~-~~~--~~i 48 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKY------GVVIINKDRE-------------------LCEEFA----KK-LKA--TII 48 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTC------CEEEEESCHH-------------------HHHHHH----HH-SSS--EEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECCHH-------------------HHHHHH----HH-cCC--eEE
Confidence 379999999999999999999997 8999985431 111111 11 122 233
Q ss_pred ecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhccc
Q 001331 592 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY 633 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~ 633 (1099)
...... +..+...-.+++|+||.++++......+...++.
T Consensus 49 ~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~ 88 (218)
T 3l4b_C 49 HGDGSH--KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMK 88 (218)
T ss_dssp ESCTTS--HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHH
T ss_pred EcCCCC--HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHH
Confidence 333322 1122223357899999999998888777777665
No 71
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=93.87 E-value=0.16 Score=58.88 Aligned_cols=95 Identities=14% Similarity=0.268 Sum_probs=65.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhC-C-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAG-V-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaG-V-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
.+|+|+|+|++|..+++.|+..| + ..+++.|.+ ..|++...+.+....+ ..+.....+
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~-------------------~~~~~~la~~l~~~~~-~~~~~~~~D 61 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRT-------------------LSKCQEIAQSIKAKGY-GEIDITTVD 61 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESC-------------------HHHHHHHHHHHHHTTC-CCCEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECC-------------------HHHHHHHHHHhhhhcC-CceEEEEec
Confidence 48999999999999999999988 4 689998753 2366666666655431 123333334
Q ss_pred CCh-----hhccC--CcEEEEecCCHHHHHHHHHHHHhcCCCceeEE
Q 001331 193 LTK-----EQLSD--FQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 232 (1099)
Q Consensus 193 l~~-----~~l~~--~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~ 232 (1099)
+++ +.+.+ .|+||.+..... ...+.+.|.+.+ +.++.
T Consensus 62 ~~d~~~l~~~l~~~~~DvVin~ag~~~-~~~v~~a~l~~g--~~vvD 105 (405)
T 4ina_A 62 ADSIEELVALINEVKPQIVLNIALPYQ-DLTIMEACLRTG--VPYLD 105 (405)
T ss_dssp TTCHHHHHHHHHHHCCSEEEECSCGGG-HHHHHHHHHHHT--CCEEE
T ss_pred CCCHHHHHHHHHhhCCCEEEECCCccc-ChHHHHHHHHhC--CCEEE
Confidence 432 24455 899998876433 457778999999 77775
No 72
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=93.86 E-value=0.09 Score=57.62 Aligned_cols=73 Identities=21% Similarity=0.297 Sum_probs=51.4
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
+.+++++|+|+||.|..++..|+..|+ .+|+|++.+ ..|++.+++.+.. ..+
T Consensus 118 l~~k~~lvlGaGg~~~aia~~L~~~G~-----~~v~i~~R~-------------------~~~a~~la~~~~~----~~~ 169 (272)
T 3pwz_A 118 LRNRRVLLLGAGGAVRGALLPFLQAGP-----SELVIANRD-------------------MAKALALRNELDH----SRL 169 (272)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHTCC-----SEEEEECSC-------------------HHHHHHHHHHHCC----TTE
T ss_pred ccCCEEEEECccHHHHHHHHHHHHcCC-----CEEEEEeCC-------------------HHHHHHHHHHhcc----CCe
Confidence 567899999999999999999999999 899987532 2366666666543 123
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccC
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALD 619 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD 619 (1099)
..... +++ . . .++|+||||+-
T Consensus 170 ~~~~~------~~l-~-~--~~~DivInaTp 190 (272)
T 3pwz_A 170 RISRY------EAL-E-G--QSFDIVVNATS 190 (272)
T ss_dssp EEECS------GGG-T-T--CCCSEEEECSS
T ss_pred eEeeH------HHh-c-c--cCCCEEEECCC
Confidence 33221 111 0 1 68999999974
No 73
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=93.72 E-value=0.07 Score=58.76 Aligned_cols=73 Identities=21% Similarity=0.297 Sum_probs=52.4
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
+.+++++|+|+||.|..++..|+..|+ .+|+|++.+ ..|++.+++.+.... .+
T Consensus 124 l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~-------------------~~~a~~la~~~~~~~---~~ 176 (281)
T 3o8q_A 124 LKGATILLIGAGGAARGVLKPLLDQQP-----ASITVTNRT-------------------FAKAEQLAELVAAYG---EV 176 (281)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTCC-----SEEEEEESS-------------------HHHHHHHHHHHGGGS---CE
T ss_pred ccCCEEEEECchHHHHHHHHHHHhcCC-----CeEEEEECC-------------------HHHHHHHHHHhhccC---Ce
Confidence 578899999999999999999999999 899988632 246666776665432 23
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccC
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALD 619 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD 619 (1099)
..... + +...++|+||+|+-
T Consensus 177 ~~~~~------~-----~l~~~aDiIInaTp 196 (281)
T 3o8q_A 177 KAQAF------E-----QLKQSYDVIINSTS 196 (281)
T ss_dssp EEEEG------G-----GCCSCEEEEEECSC
T ss_pred eEeeH------H-----HhcCCCCEEEEcCc
Confidence 33210 1 11268999999985
No 74
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.66 E-value=0.19 Score=52.67 Aligned_cols=92 Identities=9% Similarity=0.091 Sum_probs=61.4
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC-
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT- 194 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~- 194 (1099)
+|+|+|+|.+|..+++.|...|. .++++|.+.- +++ .+.+. ..+. +...+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~-------------------~~~----~l~~~-~~~~--~i~gd~~~ 54 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRE-------------------LCE----EFAKK-LKAT--IIHGDGSH 54 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHH-------------------HHH----HHHHH-SSSE--EEESCTTS
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHH-------------------HHH----HHHHH-cCCe--EEEcCCCC
Confidence 79999999999999999999997 7889885321 222 22221 1222 2333322
Q ss_pred h-----hhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEee
Q 001331 195 K-----EQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 235 (1099)
Q Consensus 195 ~-----~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~ 235 (1099)
+ ..+.++|+||++..+......+...+++..+ .+-+.+.+
T Consensus 55 ~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~-~~~iia~~ 99 (218)
T 3l4b_C 55 KEILRDAEVSKNDVVVILTPRDEVNLFIAQLVMKDFG-VKRVVSLV 99 (218)
T ss_dssp HHHHHHHTCCTTCEEEECCSCHHHHHHHHHHHHHTSC-CCEEEECC
T ss_pred HHHHHhcCcccCCEEEEecCCcHHHHHHHHHHHHHcC-CCeEEEEE
Confidence 2 2367899999999888877788888887432 44454443
No 75
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=93.57 E-value=0.11 Score=53.82 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=59.3
Q ss_pred cEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 513 KVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 513 ~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
+|+|.|+ |+||..+++.|+..|. ++++++.+.- +.. .+ ..+. ++.+
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~-------------------~~~----~~--~~~~--~~~~ 48 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH------EVLAVVRDPQ-------------------KAA----DR--LGAT--VATL 48 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCHH-------------------HHH----HH--TCTT--SEEE
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC------EEEEEEeccc-------------------ccc----cc--cCCC--ceEE
Confidence 6999997 9999999999999997 7887764321 111 11 1123 3445
Q ss_pred ecccCcccccccchhhhcCCCEEEEccC----------chHHHHHHHhhcccccccEEEcCcC
Q 001331 592 QNRVGPETENVFDDTFWENITCVINALD----------NVNARLYVDQRCLYFQKPLLESGTL 644 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~alD----------n~~ar~~i~~~c~~~~~Pli~sgt~ 644 (1099)
...+..... +.+.++|+||++.. |...-..+-+.|.+.++.+|..++.
T Consensus 49 ~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 49 VKEPLVLTE-----ADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp ECCGGGCCH-----HHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred ecccccccH-----hhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 555543222 45688999999884 3344455666777666556655443
No 76
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.49 E-value=0.052 Score=60.24 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=33.3
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+..++|+|+|+||+|..++..|...|+++|++++.+
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 568899999999999999999999999999999753
No 77
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=93.47 E-value=0.18 Score=52.49 Aligned_cols=94 Identities=19% Similarity=0.265 Sum_probs=59.9
Q ss_pred cEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 513 KVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 513 ~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
+|+|.| .|+||.++++.|+..|. ++++++.+.-....+ + .++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~------~V~~~~R~~~~~~~~---------------------------~--~~~~~ 46 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY------QIYAGARKVEQVPQY---------------------------N--NVKAV 46 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC------EEEEEESSGGGSCCC---------------------------T--TEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC------EEEEEECCccchhhc---------------------------C--CceEE
Confidence 799999 79999999999999997 788887543111100 2 34555
Q ss_pred ecccCcccccccchhhhcCCCEEEEccC---------chHHHHHHHhhcccccc-cEEEcCc
Q 001331 592 QNRVGPETENVFDDTFWENITCVINALD---------NVNARLYVDQRCLYFQK-PLLESGT 643 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~alD---------n~~ar~~i~~~c~~~~~-Pli~sgt 643 (1099)
...+....+.+ .+.++++|+||++.. |..+-..+-+.|.+.++ .+|..++
T Consensus 47 ~~D~~d~~~~~--~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS 106 (219)
T 3dqp_A 47 HFDVDWTPEEM--AKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLST 106 (219)
T ss_dssp ECCTTSCHHHH--HTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECC
T ss_pred EecccCCHHHH--HHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECc
Confidence 55555411222 345678999999875 44445556666766654 3554444
No 78
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.40 E-value=0.45 Score=52.76 Aligned_cols=74 Identities=22% Similarity=0.264 Sum_probs=51.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC----CCcEEEEE
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLSTL 189 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN----p~V~v~~~ 189 (1099)
.+|.|||+|.+|+.++..|+..|+ ..++++|.+. .|++.....+...+ ..+.+.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~-- 60 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE-------------------AKVKADQIDFQDAMANLEAHGNIV-- 60 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSSSCCEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH-------------------HHHHHHHHHHHhhhhhcCCCeEEE--
Confidence 479999999999999999999996 7899998532 24444444443322 234443
Q ss_pred ecCCChhhccCCcEEEEecCCH
Q 001331 190 TSKLTKEQLSDFQAVVFTDISL 211 (1099)
Q Consensus 190 ~~~l~~~~l~~~dvVV~~~~~~ 211 (1099)
..++ +.+.+.|+||.+....
T Consensus 61 ~~d~--~~~~~aDvViiav~~~ 80 (309)
T 1hyh_A 61 INDW--AALADADVVISTLGNI 80 (309)
T ss_dssp ESCG--GGGTTCSEEEECCSCG
T ss_pred eCCH--HHhCCCCEEEEecCCc
Confidence 2333 4678999999988653
No 79
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.37 E-value=0.18 Score=54.62 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=61.7
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
.++|+|.|+|.||..+++.|+..|. ++++++.+. +++ .+.+ +.
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~---~~~--------------------------~~~~--~~ 45 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGH------EVTGLRRSA---QPM--------------------------PAGV--QT 45 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC------CEEEEECTT---SCC--------------------------CTTC--CE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC------EEEEEeCCc---ccc--------------------------ccCC--ce
Confidence 4689999999999999999999997 788876431 111 1223 33
Q ss_pred EecccCcccccccchhhhcC-CCEEEEccC------------chHHHHHHHhhcccccc-cEEEcCcCcccc
Q 001331 591 LQNRVGPETENVFDDTFWEN-ITCVINALD------------NVNARLYVDQRCLYFQK-PLLESGTLGAKC 648 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~-~DvVi~alD------------n~~ar~~i~~~c~~~~~-Pli~sgt~G~~G 648 (1099)
+...+.... . + .+.+++ +|+||++.- |+.+-..+-+.|.+.++ .+|..++.+.+|
T Consensus 46 ~~~Dl~d~~-~-~-~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg 114 (286)
T 3gpi_A 46 LIADVTRPD-T-L-ASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYG 114 (286)
T ss_dssp EECCTTCGG-G-C-TTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCC
T ss_pred EEccCCChH-H-H-HHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEc
Confidence 444443321 1 1 234455 999998762 44455566677776664 466666555444
No 80
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.36 E-value=0.28 Score=54.95 Aligned_cols=75 Identities=15% Similarity=0.197 Sum_probs=53.7
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh----CCCcEEE
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL----NNAVVLS 187 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL----Np~V~v~ 187 (1099)
|...+|.|+|+|.+|..+|..|+..|+++++|+|.+. .|++.....|+.. +..++|.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~-------------------~~~~g~a~dL~~~~~~~~~~~~v~ 63 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ-------------------GMPNGKALDLLQTCPIEGVDFKVR 63 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCCcEEE
Confidence 4567999999999999999999999988899998532 2444444445443 2345565
Q ss_pred EEecCCChhhccCCcEEEEec
Q 001331 188 TLTSKLTKEQLSDFQAVVFTD 208 (1099)
Q Consensus 188 ~~~~~l~~~~l~~~dvVV~~~ 208 (1099)
... +.+-+.+.|+||.+.
T Consensus 64 ~t~---d~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 64 GTN---DYKDLENSDVVIVTA 81 (321)
T ss_dssp EES---CGGGGTTCSEEEECC
T ss_pred EcC---CHHHHCCCCEEEEcC
Confidence 432 235788999999985
No 81
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=93.25 E-value=0.13 Score=58.82 Aligned_cols=95 Identities=14% Similarity=0.140 Sum_probs=61.7
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
++++|+|+|+|++|..+++.|++. . .++|.|.+. .|++.+++ ...
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~-~------~V~V~~R~~-------------------~~a~~la~-------~~~-- 59 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE-F------DVYIGDVNN-------------------ENLEKVKE-------FAT-- 59 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT-S------EEEEEESCH-------------------HHHHHHTT-------TSE--
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC-C------eEEEEECCH-------------------HHHHHHHh-------hCC--
Confidence 467999999999999999999987 4 688876431 23332221 122
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCc
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGT 643 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt 643 (1099)
.....+.. .+.+ .+.++++|+||+|+-... ...+...|.+.++.+++...
T Consensus 60 ~~~~d~~~-~~~l--~~ll~~~DvVIn~~P~~~-~~~v~~a~l~~G~~~vD~s~ 109 (365)
T 2z2v_A 60 PLKVDASN-FDKL--VEVMKEFELVIGALPGFL-GFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp EEECCTTC-HHHH--HHHHTTCSCEEECCCHHH-HHHHHHHHHHTTCCEEECCC
T ss_pred eEEEecCC-HHHH--HHHHhCCCEEEECCChhh-hHHHHHHHHHhCCeEEEccC
Confidence 11111211 1122 356789999999986543 33477899999999998543
No 82
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.22 E-value=0.24 Score=52.11 Aligned_cols=102 Identities=19% Similarity=0.140 Sum_probs=60.5
Q ss_pred HHHHhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEE
Q 001331 108 TMRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVL 186 (1099)
Q Consensus 108 ~q~kL~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v 186 (1099)
.+.+|++.+|+|.|+ |++|.++++.|+..|. +|++++.+.- +.+ .+.+. .+ .
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~-------------------~~~----~~~~~--~~-~ 67 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEE-------------------QGP----ELRER--GA-S 67 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGG-------------------GHH----HHHHT--TC-S
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChH-------------------HHH----HHHhC--CC-c
Confidence 356788999999997 9999999999999996 7888875321 111 12221 22 0
Q ss_pred EEEecCCC---hhhccCCcEEEEecCC-------------HHHHHHHHHHHHhcCCCceeEEEeecc
Q 001331 187 STLTSKLT---KEQLSDFQAVVFTDIS-------------LDKAIEFDDFCHNHQPAISFIKAEVRG 237 (1099)
Q Consensus 187 ~~~~~~l~---~~~l~~~dvVV~~~~~-------------~~~~~~ln~~c~~~~~~ipfI~~~~~G 237 (1099)
.....+++ .+.+.+.|+||.+... ......+-+.|++.+. -.||..++.|
T Consensus 68 ~~~~~Dl~~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS~~ 133 (236)
T 3e8x_A 68 DIVVANLEEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGI-KRFIMVSSVG 133 (236)
T ss_dssp EEEECCTTSCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTC-CEEEEECCTT
T ss_pred eEEEcccHHHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCC-CEEEEEecCC
Confidence 33344443 2356789999977531 2223456678887761 2466666644
No 83
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=93.22 E-value=0.11 Score=56.07 Aligned_cols=75 Identities=17% Similarity=0.159 Sum_probs=52.7
Q ss_pred cEEEEcC-CcchHHHHHHHHHc-CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 513 KVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 513 ~v~vvG~-GglG~evlk~La~~-Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
||.|+|| |.+|..+++.+... |+ --+-++|.+
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~-----elva~~d~~----------------------------------------- 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDL-----TLSAELDAG----------------------------------------- 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTC-----EEEEEECTT-----------------------------------------
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCC-----EEEEEEccC-----------------------------------------
Confidence 7999997 99999999998866 66 223455532
Q ss_pred EecccCcccccccchhhh-cCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcc
Q 001331 591 LQNRVGPETENVFDDTFW-ENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 646 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~-~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~ 646 (1099)
.+ + +++. ...|+||+++ ++++-...-..|.++++|+| .||.|+
T Consensus 36 ------~d----l-~~~~~~~~DvvIDfT-~p~a~~~~~~~a~~~g~~~V-igTTG~ 79 (245)
T 1p9l_A 36 ------DP----L-SLLTDGNTEVVIDFT-HPDVVMGNLEFLIDNGIHAV-VGTTGF 79 (245)
T ss_dssp ------CC----T-HHHHHTTCCEEEECS-CTTTHHHHHHHHHHTTCEEE-ECCCCC
T ss_pred ------CC----H-HHHhccCCcEEEEcc-ChHHHHHHHHHHHHcCCCEE-EcCCCC
Confidence 00 1 1222 3789999999 55555666679999999998 456664
No 84
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=93.11 E-value=0.14 Score=56.15 Aligned_cols=38 Identities=21% Similarity=0.352 Sum_probs=34.4
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
.+.+++++|+|+||.|..++..|+..|+ .+|+|++.+.
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~-----~~v~v~~R~~ 151 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVR-----PTLTVANRTM 151 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCC-----SCCEEECSCG
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEeCCH
Confidence 3678999999999999999999999999 8999997654
No 85
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.11 E-value=0.18 Score=52.49 Aligned_cols=97 Identities=18% Similarity=0.220 Sum_probs=61.4
Q ss_pred CcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 512 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
++|+|.| .|.||..+++.|+..|. ++++++.+.-....+. -.++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~~~----------------------------~~~~~ 50 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF------EVTAVVRHPEKIKIEN----------------------------EHLKV 50 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC------EEEEECSCGGGCCCCC----------------------------TTEEE
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC------EEEEEEcCcccchhcc----------------------------CceEE
Confidence 5899999 59999999999999997 8888876532222111 13444
Q ss_pred EecccCcccccccchhhhcCCCEEEEccC-----------chHHHHHHHhhcccccc-cEEEcCcCc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALD-----------NVNARLYVDQRCLYFQK-PLLESGTLG 645 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alD-----------n~~ar~~i~~~c~~~~~-Pli~sgt~G 645 (1099)
+...+... +.+ .+.++++|+||++.. |...-..+-+.|.+.++ .+|..++.+
T Consensus 51 ~~~Dl~d~-~~~--~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 51 KKADVSSL-DEV--CEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp ECCCTTCH-HHH--HHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred EEecCCCH-HHH--HHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 54444432 111 345667788887764 34444556667777664 466655554
No 86
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=93.02 E-value=0.48 Score=52.72 Aligned_cols=71 Identities=20% Similarity=0.249 Sum_probs=51.3
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHH----hCCCcEEEEEec
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLTS 191 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~e----LNp~V~v~~~~~ 191 (1099)
+|.|+|+|.+|..++..|+..|+++|.|+|-+. .|++.....|.. ++..+++....+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~d 61 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP-------------------GKPQGEALDLAHAAAELGVDIRISGSNS 61 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEEESC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh-------------------hhHHHHHHHHHHhhhhcCCCeEEEECCC
Confidence 689999999999999999999996699999531 233333334433 455667766433
Q ss_pred CCChhhccCCcEEEEec
Q 001331 192 KLTKEQLSDFQAVVFTD 208 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~ 208 (1099)
. +-+.+.|+||.+.
T Consensus 62 -~--~a~~~aD~Vi~~a 75 (308)
T 2d4a_B 62 -Y--EDMRGSDIVLVTA 75 (308)
T ss_dssp -G--GGGTTCSEEEECC
T ss_pred -H--HHhCCCCEEEEeC
Confidence 2 4588999999984
No 87
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.01 E-value=0.32 Score=49.41 Aligned_cols=34 Identities=21% Similarity=0.225 Sum_probs=29.5
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 114 ASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 114 ~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
+.+|+|.|+ |++|.++++.|...| .++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g-~~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAG-YEVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTT-CEEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCC-CeEEEEEeCh
Confidence 468999997 999999999999999 4888888654
No 88
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.00 E-value=0.17 Score=52.87 Aligned_cols=36 Identities=19% Similarity=0.362 Sum_probs=29.0
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
++...+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 16 ~~~~~~I~iiG~G~mG~~la~~l~~~g~------~V~~~~~~ 51 (209)
T 2raf_A 16 YFQGMEITIFGKGNMGQAIGHNFEIAGH------EVTYYGSK 51 (209)
T ss_dssp ----CEEEEECCSHHHHHHHHHHHHTTC------EEEEECTT
T ss_pred ccCCCEEEEECCCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 4667899999999999999999999997 78888754
No 89
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.91 E-value=0.6 Score=51.99 Aligned_cols=109 Identities=13% Similarity=0.184 Sum_probs=69.0
Q ss_pred HHhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCC---cE
Q 001331 110 RRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA---VV 185 (1099)
Q Consensus 110 ~kL~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~---V~ 185 (1099)
..+...+|||.|+ |.+|..+++.|...|. +|+.++...-. .......+..+.+. -.
T Consensus 21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~~~ 80 (351)
T 3ruf_A 21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTG-------------------HQYNLDEVKTLVSTEQWSR 80 (351)
T ss_dssp HHHSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC-------------------CHHHHHHHHHTSCHHHHTT
T ss_pred CCCCCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCC-------------------chhhhhhhhhccccccCCc
Confidence 4567899999995 8899999999999995 78777753210 01112223322210 24
Q ss_pred EEEEecCCCh-----hhccCCcEEEEecCC--H---------------HHHHHHHHHHHhcCCCc-eeEEEeecceeE
Q 001331 186 LSTLTSKLTK-----EQLSDFQAVVFTDIS--L---------------DKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 240 (1099)
Q Consensus 186 v~~~~~~l~~-----~~l~~~dvVV~~~~~--~---------------~~~~~ln~~c~~~~~~i-pfI~~~~~G~~G 240 (1099)
++....++.+ ..+.++|+||.+... . .....+-+.|++.+ + .||++++.+.+|
T Consensus 81 ~~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg 156 (351)
T 3ruf_A 81 FCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYG 156 (351)
T ss_dssp EEEEECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGT
T ss_pred eEEEEccCCCHHHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcC
Confidence 5555556543 356789999977542 1 11234667888887 5 788888877765
No 90
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=92.78 E-value=0.067 Score=61.18 Aligned_cols=87 Identities=14% Similarity=0.079 Sum_probs=57.9
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
++++|+|+|+|++|..++++|+.. ..|++.|.+. .|++.+.+ .... ..-+
T Consensus 15 ~~~~v~IiGaG~iG~~ia~~L~~~--~~V~V~~R~~-------------------~~a~~la~-------~~~~--~~~d 64 (365)
T 2z2v_A 15 RHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNN-------------------ENLEKVKE-------FATP--LKVD 64 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCH-------------------HHHHHHTT-------TSEE--EECC
T ss_pred CCCeEEEEcCCHHHHHHHHHHHcC--CeEEEEECCH-------------------HHHHHHHh-------hCCe--EEEe
Confidence 688999999999999999999988 6888887532 23333221 1221 1111
Q ss_pred C-C----hhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEE
Q 001331 193 L-T----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 232 (1099)
Q Consensus 193 l-~----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~ 232 (1099)
+ + .+.+.++|+||.|.. ......+.+.|-+.+ +.+++
T Consensus 65 ~~~~~~l~~ll~~~DvVIn~~P-~~~~~~v~~a~l~~G--~~~vD 106 (365)
T 2z2v_A 65 ASNFDKLVEVMKEFELVIGALP-GFLGFKSIKAAIKSK--VDMVD 106 (365)
T ss_dssp TTCHHHHHHHHTTCSCEEECCC-HHHHHHHHHHHHHTT--CCEEE
T ss_pred cCCHHHHHHHHhCCCEEEECCC-hhhhHHHHHHHHHhC--CeEEE
Confidence 1 1 245778999999854 344456778899988 77665
No 91
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.72 E-value=0.23 Score=50.56 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=29.3
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 511 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 511 ~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
+++|+|.|+ |+||.++++.|+..|. ++++++.+.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~------~V~~~~r~~ 37 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGY------EVTVLVRDS 37 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCG
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC------eEEEEEeCh
Confidence 368999997 9999999999999997 788887653
No 92
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=92.72 E-value=0.35 Score=53.01 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=62.4
Q ss_pred HHHHHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCc--cEEEecCCccccccCCcccccccCcccchHHHHHHHHHH
Q 001331 504 KLQKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQG--KLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAAT 580 (1099)
Q Consensus 504 ~~q~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g--~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~ 580 (1099)
.....|.+++++|.| .||||.++++.|+..|. + +++++|.+ ..+.+.+++.+.
T Consensus 26 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~-----~~~~V~~~~r~-------------------~~~~~~~~~~l~ 81 (287)
T 3rku_A 26 KAAERLAKKTVLITGASAGIGKATALEYLEASN-----GDMKLILAARR-------------------LEKLEELKKTID 81 (287)
T ss_dssp HHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHT-----TCSEEEEEESC-------------------HHHHHHHHHHHH
T ss_pred cchhhcCCCEEEEecCCChHHHHHHHHHHHcCC-----CCceEEEEECC-------------------HHHHHHHHHHHH
Confidence 345678999999998 68999999999999987 4 77777643 235566777777
Q ss_pred hhCCCCeEEEEecccCcccc--cccc--hhhhcCCCEEEEc
Q 001331 581 SINPRLNIEALQNRVGPETE--NVFD--DTFWENITCVINA 617 (1099)
Q Consensus 581 ~~np~~~i~~~~~~v~~~~e--~~~~--~~~~~~~DvVi~a 617 (1099)
..+|..++..+...+..... ..+. .+-+...|++|++
T Consensus 82 ~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnn 122 (287)
T 3rku_A 82 QEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNN 122 (287)
T ss_dssp HHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEEC
T ss_pred hhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 77777888888877765321 1110 0123467777776
No 93
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=92.70 E-value=0.081 Score=59.74 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=64.4
Q ss_pred HHHHhcCcEEEEc-CCcchHHHHHHHHHc-CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhC
Q 001331 506 QKKLEDAKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN 583 (1099)
Q Consensus 506 q~~L~~~~v~vvG-~GglG~evlk~La~~-Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~n 583 (1099)
...+..++|+|.| .|.||+.+++.|+.. |. +++++|...- .+.. +.. .
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~~~---~~~~--~~~-------------------~ 68 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDW------EVFGMDMQTD---RLGD--LVK-------------------H 68 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSC------EEEEEESCCT---TTGG--GGG-------------------S
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCC------EEEEEeCChh---hhhh--hcc-------------------C
Confidence 3456778999999 699999999999998 76 7888875421 1100 000 1
Q ss_pred CCCeEEEEecccCcccccccchhhhcCCCEEEEccCchH-----------------HHHHHHhhcccccccEEEcCcCcc
Q 001331 584 PRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVN-----------------ARLYVDQRCLYFQKPLLESGTLGA 646 (1099)
Q Consensus 584 p~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~-----------------ar~~i~~~c~~~~~Pli~sgt~G~ 646 (1099)
-.++.+...+..+.+.+ .+.++++|+||.+..... +-..+-+.|.+.++.+|..++.+.
T Consensus 69 --~~v~~~~~Dl~~d~~~~--~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~v 144 (372)
T 3slg_A 69 --ERMHFFEGDITINKEWV--EYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEV 144 (372)
T ss_dssp --TTEEEEECCTTTCHHHH--HHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGG
T ss_pred --CCeEEEeCccCCCHHHH--HHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHH
Confidence 24555666665222222 345678899998654211 113355566666667777766655
Q ss_pred cce
Q 001331 647 KCN 649 (1099)
Q Consensus 647 ~G~ 649 (1099)
+|.
T Consensus 145 yg~ 147 (372)
T 3slg_A 145 YGM 147 (372)
T ss_dssp GBS
T ss_pred hCC
Confidence 543
No 94
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=92.59 E-value=0.2 Score=54.78 Aligned_cols=67 Identities=9% Similarity=0.122 Sum_probs=49.0
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
.+++|+|+|+||.|..++..|...|+++|+|++.+. .||+.+++.+. ..+ ...
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~-------------------~ka~~la~~~~-----~~~---~~~ 170 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV-------------------KTGQYLAALYG-----YAY---INS 170 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH-------------------HHHHHHHHHHT-----CEE---ESC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH-------------------HHHHHHHHHcC-----Ccc---chh
Confidence 457999999999999999999999999999987432 36666665552 111 111
Q ss_pred CChhhccCCcEEEEecC
Q 001331 193 LTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 193 l~~~~l~~~dvVV~~~~ 209 (1099)
+. +.++|+||.|+.
T Consensus 171 ~~---~~~~DivInaTp 184 (271)
T 1npy_A 171 LE---NQQADILVNVTS 184 (271)
T ss_dssp CT---TCCCSEEEECSS
T ss_pred hh---cccCCEEEECCC
Confidence 11 457899998875
No 95
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.47 E-value=0.14 Score=56.82 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=30.3
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
.-.+|.|||+|.+|+.++++|+..|. .++++|.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~------~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGF------KVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCC------eEEEEeCCH
Confidence 34689999999999999999999997 788887553
No 96
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.36 E-value=0.41 Score=53.46 Aligned_cols=78 Identities=17% Similarity=0.253 Sum_probs=52.8
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC----CC
Q 001331 109 MRRLFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NA 183 (1099)
Q Consensus 109 q~kL~~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN----p~ 183 (1099)
|+++...+|.|+|+|.+|..++..|+..|. .+|.|+|-+. .|++.....|.... ..
T Consensus 1 m~~m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~ 61 (317)
T 3d0o_A 1 MNKFKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT-------------------EKVRGDVMDLKHATPYSPTT 61 (317)
T ss_dssp ---CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH-------------------HHHHHHHHHHHHHGGGSSSC
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHhhhhhhhHHhhhhhcCCC
Confidence 345667899999999999999999999886 7899998531 23433223333222 45
Q ss_pred cEEEEEecCCChhhccCCcEEEEecC
Q 001331 184 VVLSTLTSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 184 V~v~~~~~~l~~~~l~~~dvVV~~~~ 209 (1099)
+++.. . +.+-+.+.|+||++..
T Consensus 62 ~~v~~--~--~~~a~~~aDvVvi~ag 83 (317)
T 3d0o_A 62 VRVKA--G--EYSDCHDADLVVICAG 83 (317)
T ss_dssp CEEEE--C--CGGGGTTCSEEEECCC
T ss_pred eEEEe--C--CHHHhCCCCEEEECCC
Confidence 56665 2 2456889999999864
No 97
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=92.33 E-value=0.57 Score=52.27 Aligned_cols=72 Identities=18% Similarity=0.254 Sum_probs=51.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCC----CcEEEE
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN----AVVLST 188 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp----~V~v~~ 188 (1099)
..+|.|+|+|.+|..++..|...|. ++|.++|.+. .|+++....|....+ .+++..
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~-------------------~~~~~~~~dl~~~~~~~~~~~~i~~ 66 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE-------------------SKAIGDAMDFNHGKVFAPKPVDIWH 66 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc-------------------chHHHHHhhHHHHhhhcCCCeEEEc
Confidence 3689999999999999999999884 7899998531 244444444444333 455553
Q ss_pred EecCCChhhccCCcEEEEec
Q 001331 189 LTSKLTKEQLSDFQAVVFTD 208 (1099)
Q Consensus 189 ~~~~l~~~~l~~~dvVV~~~ 208 (1099)
. +.+-+.+.|+||.+.
T Consensus 67 --~--~~~al~~aDvViia~ 82 (316)
T 1ldn_A 67 --G--DYDDCRDADLVVICA 82 (316)
T ss_dssp --C--CGGGTTTCSEEEECC
T ss_pred --C--cHHHhCCCCEEEEcC
Confidence 2 234588999999984
No 98
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.29 E-value=0.35 Score=56.12 Aligned_cols=90 Identities=12% Similarity=0.298 Sum_probs=63.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
+.+|+|+|+|-+|..+++.|...|+ .++++|.+.- ++ +.+++.. + .++..+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~-------------------~v----~~~~~~g--~--~vi~GDa 55 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPD-------------------HI----ETLRKFG--M--KVFYGDA 55 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHH-------------------HH----HHHHHTT--C--CCEESCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHH-------------------HH----HHHHhCC--C--eEEEcCC
Confidence 4589999999999999999999997 7999996532 22 2223222 2 2233333
Q ss_pred C-hh-----hccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeE
Q 001331 194 T-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 231 (1099)
Q Consensus 194 ~-~~-----~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI 231 (1099)
+ ++ -+.++++||++.++......+-..+++.++.++.|
T Consensus 56 t~~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Ii 99 (413)
T 3l9w_A 56 TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQII 99 (413)
T ss_dssp TCHHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEE
T ss_pred CCHHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCCCCeEE
Confidence 2 22 25678999999998888889999999998544443
No 99
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.26 E-value=0.27 Score=53.97 Aligned_cols=107 Identities=15% Similarity=0.106 Sum_probs=67.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh--CCCcEEEE
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL--NNAVVLST 188 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL--Np~V~v~~ 188 (1099)
.+.+++|+|+|+||.|..++..|...|+++|++++.+.-....+... ++... .+.+.+. ..++-|++
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~-------~~~~~----~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN-------INKIN----LSHAESHLDEFDIIINT 182 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC-------CEEEC----HHHHHHTGGGCSEEEEC
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh-------ccccc----HhhHHHHhcCCCEEEEC
Confidence 46789999999999999999999999999999999876544444432 11100 1122221 24555544
Q ss_pred EecC--------CChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeE
Q 001331 189 LTSK--------LTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 231 (1099)
Q Consensus 189 ~~~~--------l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI 231 (1099)
.... +..+.+..-.+|++...+... ..+-+.+++.| +..+
T Consensus 183 Tp~Gm~~~~~~~l~~~~l~~~~~V~D~vY~P~~-T~ll~~A~~~G--~~~~ 230 (277)
T 3don_A 183 TPAGMNGNTDSVISLNRLASHTLVSDIVYNPYK-TPILIEAEQRG--NPIY 230 (277)
T ss_dssp CC-------CCSSCCTTCCSSCEEEESCCSSSS-CHHHHHHHHTT--CCEE
T ss_pred ccCCCCCCCcCCCCHHHcCCCCEEEEecCCCCC-CHHHHHHHHCc--CEEe
Confidence 3221 233456666778877654322 34677888888 5543
No 100
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=92.09 E-value=0.36 Score=52.66 Aligned_cols=36 Identities=25% Similarity=0.343 Sum_probs=32.6
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+.+++|+|+|+|++|..+++.|...|+ +|+++|.+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~-~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC-EEEEEECC
Confidence 3678899999999999999999999999 99998853
No 101
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=92.09 E-value=0.17 Score=56.41 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=27.7
Q ss_pred HHHHhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 506 QKKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 506 q~~L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
++.+.+++|+|.|+ |.||..+++.|+..|. +++++|..
T Consensus 14 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~ 52 (347)
T 4id9_A 14 LVPRGSHMILVTGSAGRVGRAVVAALRTQGR------TVRGFDLR 52 (347)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTC------CEEEEESS
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCC
Confidence 56778889999996 9999999999999997 78887754
No 102
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=92.03 E-value=0.31 Score=51.49 Aligned_cols=92 Identities=17% Similarity=0.130 Sum_probs=62.3
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
...+|+|+|+|.+|..+++.|...|. ++++|.+.- ++ +.+. +.+. +...+
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~-------------------~~----~~~~---~~~~--~i~gd 57 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RK----KVLR---SGAN--FVHGD 57 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGG-------------------HH----HHHH---TTCE--EEESC
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHH-------------------HH----HHHh---cCCe--EEEcC
Confidence 35689999999999999999999987 888885321 22 2222 3333 33343
Q ss_pred CC-hh-----hccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEee
Q 001331 193 LT-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEV 235 (1099)
Q Consensus 193 l~-~~-----~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~ 235 (1099)
.+ ++ .+.++|+||++..+.+....+...+++.++.+ .|.+.+
T Consensus 58 ~~~~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~~~-~iia~~ 105 (234)
T 2aef_A 58 PTRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESV-RIIAEA 105 (234)
T ss_dssp TTCHHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCSSS-EEEEEC
T ss_pred CCCHHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCCCC-eEEEEE
Confidence 32 22 36789999999888777788888999988432 344333
No 103
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.00 E-value=0.45 Score=53.07 Aligned_cols=83 Identities=13% Similarity=0.006 Sum_probs=53.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
..+|.|||+|.+|..+|++|+..|...++++|.+.-.. .|++...+.+.+.. + . ...
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~----------------~~~~~~~~~~~~~g--~---~-~~s- 80 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDP----------------AASGALRARAAELG--V---E-PLD- 80 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCT----------------TTHHHHHHHHHHTT--C---E-EES-
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccc----------------cchHHHHHHHHHCC--C---C-CCC-
Confidence 46899999999999999999999955899988643100 13444444454432 2 1 101
Q ss_pred ChhhccCCcEEEEecCCHHHHHHHHH
Q 001331 194 TKEQLSDFQAVVFTDISLDKAIEFDD 219 (1099)
Q Consensus 194 ~~~~l~~~dvVV~~~~~~~~~~~ln~ 219 (1099)
..+.+.+.|+||+|..+......+.+
T Consensus 81 ~~e~~~~aDvVi~avp~~~~~~~~~~ 106 (317)
T 4ezb_A 81 DVAGIACADVVLSLVVGAATKAVAAS 106 (317)
T ss_dssp SGGGGGGCSEEEECCCGGGHHHHHHH
T ss_pred HHHHHhcCCEEEEecCCHHHHHHHHH
Confidence 23456678888888765544444433
No 104
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=91.99 E-value=0.23 Score=53.65 Aligned_cols=83 Identities=14% Similarity=0.308 Sum_probs=55.7
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
|.+++++|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+...++...
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 62 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA------NVLINGRR-------------------EENVNETIKEIRAQYPDAI 62 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHHCTTCE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhhCCCce
Confidence 5567888888 58999999999999997 78887643 2345556667777777777
Q ss_pred EEEEecccCcccc--cccchhhhcCCCEEEEcc
Q 001331 588 IEALQNRVGPETE--NVFDDTFWENITCVINAL 618 (1099)
Q Consensus 588 i~~~~~~v~~~~e--~~~~~~~~~~~DvVi~al 618 (1099)
+..+...+..... .++ +-+...|++|++.
T Consensus 63 ~~~~~~D~~~~~~~~~~~--~~~g~id~lv~nA 93 (267)
T 3t4x_A 63 LQPVVADLGTEQGCQDVI--EKYPKVDILINNL 93 (267)
T ss_dssp EEEEECCTTSHHHHHHHH--HHCCCCSEEEECC
T ss_pred EEEEecCCCCHHHHHHHH--HhcCCCCEEEECC
Confidence 7777766654221 111 1123567666653
No 105
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.99 E-value=0.43 Score=52.42 Aligned_cols=90 Identities=16% Similarity=0.125 Sum_probs=56.9
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
.+|.|||+|.+|+.++++|+..|. +++++|.+. .|++.+++ . .+. .
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~------~V~~~d~~~-------------------~~~~~~~~----~--g~~--~- 49 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDLVQ-------------------SAVDGLVA----A--GAS--A- 49 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECSSH-------------------HHHHHHHH----T--TCE--E-
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC------eEEEEcCCH-------------------HHHHHHHH----C--CCe--E-
Confidence 589999999999999999999997 788887543 12222222 1 121 1
Q ss_pred ecccCcccccccchhhhcCCCEEEEcc-CchHHHHHHH---hhc--ccccccEEEcCcC
Q 001331 592 QNRVGPETENVFDDTFWENITCVINAL-DNVNARLYVD---QRC--LYFQKPLLESGTL 644 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~al-Dn~~ar~~i~---~~c--~~~~~Pli~sgt~ 644 (1099)
..+. .+..++.|+||.|+ +....+..+. ... ...+..+++.++.
T Consensus 50 ----~~~~-----~~~~~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~ 99 (302)
T 2h78_A 50 ----ARSA-----RDAVQGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTI 99 (302)
T ss_dssp ----CSSH-----HHHHTTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCC
T ss_pred ----cCCH-----HHHHhCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCC
Confidence 1111 34567899999999 4555666665 333 2335556665543
No 106
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=91.93 E-value=0.73 Score=47.77 Aligned_cols=94 Identities=14% Similarity=0.104 Sum_probs=61.7
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 115 SNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 115 s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
.+|+|.| .|++|..+++.|...| .+|++++...-....+. + .++....++
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~--------------------------~--~~~~~~~Dl 55 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRG-FEVTAVVRHPEKIKIEN--------------------------E--HLKVKKADV 55 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTT-CEEEEECSCGGGCCCCC--------------------------T--TEEEECCCT
T ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEEcCcccchhcc--------------------------C--ceEEEEecC
Confidence 5899999 5899999999999999 48998887543322221 1 233333443
Q ss_pred Ch-----hhccCCcEEEEecCC-----------HHHHHHHHHHHHhcCCCc-eeEEEeeccee
Q 001331 194 TK-----EQLSDFQAVVFTDIS-----------LDKAIEFDDFCHNHQPAI-SFIKAEVRGLF 239 (1099)
Q Consensus 194 ~~-----~~l~~~dvVV~~~~~-----------~~~~~~ln~~c~~~~~~i-pfI~~~~~G~~ 239 (1099)
.+ +.+.++|+||.+... ......+-+.|++.+ + .||..++.+.+
T Consensus 56 ~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~ 116 (227)
T 3dhn_A 56 SSLDEVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSL 116 (227)
T ss_dssp TCHHHHHHHHTTCSEEEECCCC------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTS
T ss_pred CCHHHHHHHhcCCCEEEEeCcCCCCChhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhc
Confidence 21 235567777766432 334456778888887 5 68887776644
No 107
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=91.93 E-value=0.17 Score=55.36 Aligned_cols=33 Identities=27% Similarity=0.466 Sum_probs=29.6
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
.+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~------~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF------AVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEeCCH
Confidence 589999999999999999999998 888888543
No 108
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.89 E-value=0.69 Score=51.49 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=30.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+|.|+|+|.+|+.+|..|+..|...++++|.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~ 37 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIA 37 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCC
Confidence 589999999999999999999998679999864
No 109
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=91.87 E-value=0.26 Score=52.94 Aligned_cols=63 Identities=17% Similarity=0.263 Sum_probs=43.8
Q ss_pred HhcCcEEEEcC-C-cchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 509 LEDAKVFIVGS-G-ALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 509 L~~~~v~vvG~-G-glG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
+.+++|+|.|+ | |||.++++.|+..|. +++++|.+. .+.+.+++.+.+.. ..
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~-~~ 73 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA------DVVISDYHE-------------------RRLGETRDQLADLG-LG 73 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHTTC-SS
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC------EEEEecCCH-------------------HHHHHHHHHHHhcC-CC
Confidence 56788999998 7 899999999999998 788887542 23444445554433 23
Q ss_pred eEEEEecccCc
Q 001331 587 NIEALQNRVGP 597 (1099)
Q Consensus 587 ~i~~~~~~v~~ 597 (1099)
++..+...+..
T Consensus 74 ~~~~~~~Dl~~ 84 (266)
T 3o38_A 74 RVEAVVCDVTS 84 (266)
T ss_dssp CEEEEECCTTC
T ss_pred ceEEEEeCCCC
Confidence 56666665554
No 110
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=91.81 E-value=0.24 Score=58.47 Aligned_cols=100 Identities=15% Similarity=0.170 Sum_probs=57.7
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
.+..++|+|+|+|++|..++..|+..|- -+++++|.+. .|++.+++. +.+.
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g-----~~V~v~~R~~-------------------~ka~~la~~-----~~~~ 70 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDD-----INVTVACRTL-------------------ANAQALAKP-----SGSK 70 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTT-----EEEEEEESSH-------------------HHHHHHHGG-----GTCE
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCC-----CeEEEEECCH-------------------HHHHHHHHh-----cCCc
Confidence 4556799999999999999999999843 3788886431 233222221 1222
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcC
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 642 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sg 642 (1099)
.+...+... +.+ .+.++++|+||+|+-.... ..+...|...++.+++..
T Consensus 71 --~~~~D~~d~-~~l--~~~l~~~DvVIn~tp~~~~-~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 71 --AISLDVTDD-SAL--DKVLADNDVVISLIPYTFH-PNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp --EEECCTTCH-HHH--HHHHHTSSEEEECSCGGGH-HHHHHHHHHHTCEEEECS
T ss_pred --EEEEecCCH-HHH--HHHHcCCCEEEECCchhhh-HHHHHHHHhcCCEEEEee
Confidence 222222211 111 2345688888888865422 235556666667776643
No 111
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=91.76 E-value=0.39 Score=53.89 Aligned_cols=75 Identities=16% Similarity=0.217 Sum_probs=55.3
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCC---CcEEE
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVVLS 187 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp---~V~v~ 187 (1099)
....+|.|+|+|.+|+.+|..|+..|+ +++.|+|.+ ..|++..+..|+...| .+.+.
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~~i~ 67 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPKKIY 67 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCcEEE
Confidence 346789999999999999999999998 689999852 2366666666665544 34443
Q ss_pred EEecCCChhhccCCcEEEEecC
Q 001331 188 TLTSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 188 ~~~~~l~~~~l~~~dvVV~~~~ 209 (1099)
.. +.+-+.+.|+||.+..
T Consensus 68 --~~--~~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 68 --SA--EYSDAKDADLVVITAG 85 (326)
T ss_dssp --EC--CGGGGTTCSEEEECCC
T ss_pred --EC--cHHHhcCCCEEEECCC
Confidence 22 2356889999998854
No 112
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=91.70 E-value=0.43 Score=53.03 Aligned_cols=106 Identities=12% Similarity=0.165 Sum_probs=60.7
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCC-eEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEE
Q 001331 112 LFASNILVSGM-QGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 189 (1099)
Q Consensus 112 L~~s~VlIiG~-gglG~EiaKnLvlaGVg-~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~ 189 (1099)
+...+|||.|+ |.+|..+++.|...|-. .++.+|....... . ..+..+...-.++..
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~--------------------~~l~~~~~~~~~~~~ 80 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-L--------------------NNVKSIQDHPNYYFV 80 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-G--------------------GGGTTTTTCTTEEEE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-h--------------------hhhhhhccCCCeEEE
Confidence 45678999997 89999999999999932 5666664321100 0 011112212234444
Q ss_pred ecCCCh-----hhccC--CcEEEEecCC-----------------HHHHHHHHHHHHhcCCCce-eEEEeecceeE
Q 001331 190 TSKLTK-----EQLSD--FQAVVFTDIS-----------------LDKAIEFDDFCHNHQPAIS-FIKAEVRGLFG 240 (1099)
Q Consensus 190 ~~~l~~-----~~l~~--~dvVV~~~~~-----------------~~~~~~ln~~c~~~~~~ip-fI~~~~~G~~G 240 (1099)
..++.+ ..+.+ +|+||.+... ......+-+.|++.+ ++ ||++++.+.+|
T Consensus 81 ~~Dl~d~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vy~ 154 (346)
T 4egb_A 81 KGEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP--HIKLVQVSTDEVYG 154 (346)
T ss_dssp ECCTTCHHHHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST--TSEEEEEEEGGGGC
T ss_pred EcCCCCHHHHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeCchHHhC
Confidence 444432 12333 7777755321 111246677888887 55 88888877765
No 113
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=91.56 E-value=0.31 Score=53.49 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=28.5
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.++|+|.| .|.||..+++.|+..|. ++++++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN------TPIILTRS 35 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 46899999 69999999999999997 78887754
No 114
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.54 E-value=0.61 Score=51.59 Aligned_cols=72 Identities=15% Similarity=0.079 Sum_probs=50.8
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCC-eEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC----CCcEEEEEe
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLSTLT 190 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg-~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN----p~V~v~~~~ 190 (1099)
+|.|+|+|.+|..+|..|+..|.. +++|+|.+. .|++.....|+..+ ..++|....
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 62 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE-------------------DLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH-------------------HHHHHHHHHHHHHHHTTTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh-------------------HHHHHHHHHHHhhhhhcCCCCEEEEeC
Confidence 799999999999999999999964 899998532 23433333344333 345666543
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
+ .+-+.+.|+||.+..
T Consensus 63 d---~~a~~~aDiVViaag 78 (294)
T 1oju_A 63 D---YSLLKGSEIIVVTAG 78 (294)
T ss_dssp C---GGGGTTCSEEEECCC
T ss_pred C---HHHhCCCCEEEECCC
Confidence 2 567889999998853
No 115
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=91.54 E-value=0.97 Score=50.18 Aligned_cols=105 Identities=11% Similarity=0.158 Sum_probs=65.3
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEE
Q 001331 111 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 189 (1099)
Q Consensus 111 kL~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~ 189 (1099)
.+...+|||.|+ |.+|..+++.|...|. +|+++|...-... . . +..+...-.++..
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~-------~------------~~~~~~~~~~~~~ 80 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGH-EVTVVDNFFTGRK---R-------N------------VEHWIGHENFELI 80 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCG---G-------G------------TGGGTTCTTEEEE
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCC-EEEEEeCCCccch---h-------h------------hhhhccCCceEEE
Confidence 345689999997 8999999999999995 7888775321100 0 0 0011111234555
Q ss_pred ecCCChhhccCCcEEEEecCC---------HHH--------HHHHHHHHHhcCCCceeEEEeecceeE
Q 001331 190 TSKLTKEQLSDFQAVVFTDIS---------LDK--------AIEFDDFCHNHQPAISFIKAEVRGLFG 240 (1099)
Q Consensus 190 ~~~l~~~~l~~~dvVV~~~~~---------~~~--------~~~ln~~c~~~~~~ipfI~~~~~G~~G 240 (1099)
..++.+..+.++|+||.+... ... ...+-+.|++.+ +.||.+++.+.+|
T Consensus 81 ~~D~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~v~g 146 (343)
T 2b69_A 81 NHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEVYG 146 (343)
T ss_dssp ECCTTSCCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGGB
T ss_pred eCccCChhhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEECcHHHhC
Confidence 556655567789999976431 111 235567888888 7888888877655
No 116
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=91.51 E-value=0.34 Score=55.18 Aligned_cols=115 Identities=17% Similarity=0.195 Sum_probs=68.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh-CCCcEEEEEe
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLT 190 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL-Np~V~v~~~~ 190 (1099)
++..+|.|||+|.+|..+|++|...|. .++++|.+.-....+... |-..+....+.+... .|++-+....
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~--------g~~~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALERE--------GIAGARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT--------TCBCCSSHHHHHHHSCSSCEEEECSC
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHC--------CCEEeCCHHHHHhcCCCCCEEEEeCC
Confidence 446799999999999999999999995 899998764332222111 100000111222221 2455555444
Q ss_pred cCCCh-------hhccCCcEEEEecC-CHHHHHHHHHHHHhcCCCceeEEEeecc
Q 001331 191 SKLTK-------EQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRG 237 (1099)
Q Consensus 191 ~~l~~-------~~l~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ipfI~~~~~G 237 (1099)
....+ ..+..-++||++.- ......++.+.+.+.+ +.|+.+.+.|
T Consensus 91 ~~~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g--~~~vdapVsG 143 (358)
T 4e21_A 91 AAVVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQG--ITYVDVGTSG 143 (358)
T ss_dssp GGGHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTT--CEEEEEEEEC
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCC--CEEEeCCCCC
Confidence 33111 12344467776654 5556667788888888 8888876654
No 117
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.49 E-value=0.34 Score=53.86 Aligned_cols=94 Identities=9% Similarity=0.023 Sum_probs=58.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
..+|.|||+|.+|+.++++|+..|. ..++++|.+. ...|.+ .+.+. .+. .
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~-----~~V~~~dr~~-----------------~~~~~~----~~~~~--g~~--~ 73 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGA-----IDMAAYDAAS-----------------AESWRP----RAEEL--GVS--C 73 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSC-----CEEEEECSSC-----------------HHHHHH----HHHHT--TCE--E
T ss_pred CCEEEEECccHHHHHHHHHHHHCCC-----CeEEEEcCCC-----------------CHHHHH----HHHHC--CCE--E
Confidence 4689999999999999999999997 7899988653 011222 12221 111 1
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhccc--ccccEEEcCcC
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY--FQKPLLESGTL 644 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~--~~~Pli~sgt~ 644 (1099)
..+. .+..++.|+||.|+-.......+..+... .+..+|+.++.
T Consensus 74 -----~~~~-----~e~~~~aDvVi~~vp~~~~~~~~~~l~~~l~~~~ivvd~st~ 119 (312)
T 3qsg_A 74 -----KASV-----AEVAGECDVIFSLVTAQAALEVAQQAGPHLCEGALYADFTSC 119 (312)
T ss_dssp -----CSCH-----HHHHHHCSEEEECSCTTTHHHHHHHHGGGCCTTCEEEECCCC
T ss_pred -----eCCH-----HHHHhcCCEEEEecCchhHHHHHHhhHhhcCCCCEEEEcCCC
Confidence 1111 24457788888888776666555554432 34456665554
No 118
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.49 E-value=0.32 Score=54.79 Aligned_cols=78 Identities=14% Similarity=0.191 Sum_probs=55.2
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCC---CcE
Q 001331 110 RRLFASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVV 185 (1099)
Q Consensus 110 ~kL~~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp---~V~ 185 (1099)
......+|.|+|+|.+|+.+|..|++.|. ..++|+|-+ ..|++..+.-|+...+ ...
T Consensus 15 ~~~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~ 75 (331)
T 4aj2_A 15 EQVPQNKITVVGVGAVGMACAISILMKDLADELALVDVI-------------------EDKLKGEMMDLQHGSLFLKTPK 75 (331)
T ss_dssp --CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGCSCCE
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC-------------------hHHHHHHHHhhhhhhhccCCCe
Confidence 45667899999999999999999999997 589999842 3467776667765532 223
Q ss_pred EEEEecCCChhhccCCcEEEEecC
Q 001331 186 LSTLTSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 186 v~~~~~~l~~~~l~~~dvVV~~~~ 209 (1099)
+.. ..+ .+-+.+.|+||.+..
T Consensus 76 i~~-~~d--~~~~~~aDiVvi~aG 96 (331)
T 4aj2_A 76 IVS-SKD--YSVTANSKLVIITAG 96 (331)
T ss_dssp EEE-CSS--GGGGTTEEEEEECCS
T ss_pred EEE-cCC--HHHhCCCCEEEEccC
Confidence 322 222 235889999998753
No 119
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=91.45 E-value=1 Score=49.30 Aligned_cols=69 Identities=14% Similarity=0.196 Sum_probs=53.2
Q ss_pred HHHHHhhcCeEEEEc-CChHHHHHHHHHHHhCCC--eEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCC
Q 001331 107 ETMRRLFASNILVSG-MQGLGAEIAKNLILAGVK--SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA 183 (1099)
Q Consensus 107 e~q~kL~~s~VlIiG-~gglG~EiaKnLvlaGVg--~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~ 183 (1099)
..+..|.+++|+|.| .||+|.++|+.|+..|.+ ++.+++.+ ..+.+.+.+.+.+.++.
T Consensus 26 ~~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~ 86 (287)
T 3rku_A 26 KAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARR-------------------LEKLEELKKTIDQEFPN 86 (287)
T ss_dssp HHHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESC-------------------HHHHHHHHHHHHHHCTT
T ss_pred cchhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECC-------------------HHHHHHHHHHHHhhCCC
Confidence 345678999999998 579999999999999975 78887642 23566777778877777
Q ss_pred cEEEEEecCCC
Q 001331 184 VVLSTLTSKLT 194 (1099)
Q Consensus 184 V~v~~~~~~l~ 194 (1099)
.++.....+++
T Consensus 87 ~~~~~~~~Dv~ 97 (287)
T 3rku_A 87 AKVHVAQLDIT 97 (287)
T ss_dssp CEEEEEECCTT
T ss_pred CeEEEEECCCC
Confidence 77777766654
No 120
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=91.40 E-value=0.48 Score=51.20 Aligned_cols=95 Identities=20% Similarity=0.219 Sum_probs=61.5
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
+..+|||.|+|.+|..+++.|...|. +|+.++...-. + .+.++ ....+
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~--------------------------~~~~~--~~~~D 49 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGH-EVTGLRRSAQP---M--------------------------PAGVQ--TLIAD 49 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTC-CEEEEECTTSC---C--------------------------CTTCC--EEECC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCccc---c--------------------------ccCCc--eEEcc
Confidence 45689999999999999999999997 67777653211 1 12222 22223
Q ss_pred CCh-----hhccC-CcEEEEecC------------CHHHHHHHHHHHHhcCCCceeEEEeecceeE
Q 001331 193 LTK-----EQLSD-FQAVVFTDI------------SLDKAIEFDDFCHNHQPAISFIKAEVRGLFG 240 (1099)
Q Consensus 193 l~~-----~~l~~-~dvVV~~~~------------~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G 240 (1099)
+.+ +.+.+ +|+||.+.. +......+-+.|++.+. ..||.+++.+.+|
T Consensus 50 l~d~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-~~~v~~SS~~vyg 114 (286)
T 3gpi_A 50 VTRPDTLASIVHLRPEILVYCVAASEYSDEHYRLSYVEGLRNTLSALEGAPL-QHVFFVSSTGVYG 114 (286)
T ss_dssp TTCGGGCTTGGGGCCSEEEECHHHHHHC-----CCSHHHHHHHHHHTTTSCC-CEEEEEEEGGGCC
T ss_pred CCChHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHHHhhCCC-CEEEEEcccEEEc
Confidence 321 23444 888886532 23345567778887761 3688888888776
No 121
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=91.35 E-value=0.53 Score=49.13 Aligned_cols=37 Identities=24% Similarity=0.302 Sum_probs=29.2
Q ss_pred HHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 110 RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 110 ~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.++...+|.|||+|.+|+.+++.|...|. +++++|.+
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l~~~g~-~V~~~~~~ 51 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNFEIAGH-EVTYYGSK 51 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHHHHTTC-EEEEECTT
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCC
Confidence 45778899999999999999999999996 78888753
No 122
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=91.34 E-value=0.1 Score=61.56 Aligned_cols=94 Identities=14% Similarity=0.231 Sum_probs=64.9
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
..||+|+|+|-+|..+++.|...|. .+++||.|.=. .+.+... ..+..
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~------~v~vId~d~~~-----------------------~~~~~~~---~~~~~ 50 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENN------DITIVDKDGDR-----------------------LRELQDK---YDLRV 50 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTE------EEEEEESCHHH-----------------------HHHHHHH---SSCEE
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHHH-----------------------HHHHHHh---cCcEE
Confidence 4589999999999999999998886 89999977421 1222221 12334
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccc-cccE
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYF-QKPL 638 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~-~~Pl 638 (1099)
+....+. ...+...-.+++|++|.++++-++-..+...++.. +.|-
T Consensus 51 i~Gd~~~--~~~L~~Agi~~ad~~ia~t~~De~Nl~~~~~Ak~~~~~~~ 97 (461)
T 4g65_A 51 VNGHASH--PDVLHEAGAQDADMLVAVTNTDETNMAACQVAFTLFNTPN 97 (461)
T ss_dssp EESCTTC--HHHHHHHTTTTCSEEEECCSCHHHHHHHHHHHHHHHCCSS
T ss_pred EEEcCCC--HHHHHhcCCCcCCEEEEEcCChHHHHHHHHHHHHhcCCcc
Confidence 4443332 22333445688999999999999998888887764 4443
No 123
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=91.29 E-value=0.3 Score=54.15 Aligned_cols=36 Identities=19% Similarity=0.445 Sum_probs=30.6
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+.+++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~------~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH------EILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC------EEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 455678999996 9999999999999997 78888754
No 124
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=91.25 E-value=0.87 Score=50.16 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=51.0
Q ss_pred hcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 510 EDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 510 ~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
.+++|+|.|+ |.||+.+++.|+..|. +++++|.+. .+...+.+.+....+ -++
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~ 63 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGY------KVRGTARSA-------------------SKLANLQKRWDAKYP-GRF 63 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESSH-------------------HHHHHHHHHHHHHST-TTE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEeCCc-------------------ccHHHHHHHhhccCC-Cce
Confidence 4578999996 9999999999999987 777776321 122333333333332 245
Q ss_pred EEE-ecccCcccccccchhhhcCCCEEEEccC
Q 001331 589 EAL-QNRVGPETENVFDDTFWENITCVINALD 619 (1099)
Q Consensus 589 ~~~-~~~v~~~~e~~~~~~~~~~~DvVi~alD 619 (1099)
+.+ ...+.... .+ .++++++|+||++..
T Consensus 64 ~~~~~~D~~d~~-~~--~~~~~~~d~vih~A~ 92 (342)
T 1y1p_A 64 ETAVVEDMLKQG-AY--DEVIKGAAGVAHIAS 92 (342)
T ss_dssp EEEECSCTTSTT-TT--TTTTTTCSEEEECCC
T ss_pred EEEEecCCcChH-HH--HHHHcCCCEEEEeCC
Confidence 555 45554321 12 345678999999863
No 125
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=91.04 E-value=0.63 Score=47.85 Aligned_cols=93 Identities=20% Similarity=0.149 Sum_probs=57.0
Q ss_pred CcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 512 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 512 ~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
.||+|.|+ |+||..+++.|+..|. ++++++.+. .|.. ...+.+ +.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~-------------------~~~~-------~~~~~~--~~ 46 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGH------EVTAIVRNA-------------------GKIT-------QTHKDI--NI 46 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCS-------------------HHHH-------HHCSSS--EE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCC------EEEEEEcCc-------------------hhhh-------hccCCC--eE
Confidence 37999995 9999999999999997 788776431 1111 111333 44
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCc--------hHHHHHHHhhccccc-ccEEEcCc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDN--------VNARLYVDQRCLYFQ-KPLLESGT 643 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn--------~~ar~~i~~~c~~~~-~Pli~sgt 643 (1099)
+...+..... +.+.++|+||++... ...-..+-+.|.+.+ ..+|..++
T Consensus 47 ~~~D~~d~~~-----~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS 103 (221)
T 3ew7_A 47 LQKDIFDLTL-----SDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGG 103 (221)
T ss_dssp EECCGGGCCH-----HHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECC
T ss_pred EeccccChhh-----hhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCCceEEEEec
Confidence 4444443221 456889999998743 233345556666663 34554443
No 126
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=90.99 E-value=0.47 Score=52.75 Aligned_cols=39 Identities=23% Similarity=0.193 Sum_probs=27.3
Q ss_pred HHHHhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 108 TMRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 108 ~q~kL~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+..+...+|||.|+ |.+|..+++.|...|. +|+++|..
T Consensus 13 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 52 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLR 52 (347)
T ss_dssp --------CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred cccccCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 356778889999997 8999999999999996 67777754
No 127
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.99 E-value=0.59 Score=52.09 Aligned_cols=99 Identities=8% Similarity=0.029 Sum_probs=62.7
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
...+|.|||+|.+|..++++|+..|. -+++++|.+.=.. .|++...+.+.+. .+
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~~~G~-----~~V~~~dr~~~~~----------------~~~~~~~~~~~~~--g~--- 76 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLGGRNA-----ARLAAYDLRFNDP----------------AASGALRARAAEL--GV--- 76 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECGGGGCT----------------TTHHHHHHHHHHT--TC---
T ss_pred cCCeEEEECccHHHHHHHHHHHHcCC-----CeEEEEeCCCccc----------------cchHHHHHHHHHC--CC---
Confidence 45789999999999999999999993 3788887543100 1222233333322 22
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhccc--ccccEEEcCcC
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY--FQKPLLESGTL 644 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~--~~~Pli~sgt~ 644 (1099)
...+. .+..++.|+||.|+-.......+..+... .+..+|+.++.
T Consensus 77 -----~~~s~-----~e~~~~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~~st~ 123 (317)
T 4ezb_A 77 -----EPLDD-----VAGIACADVVLSLVVGAATKAVAASAAPHLSDEAVFIDLNSV 123 (317)
T ss_dssp -----EEESS-----GGGGGGCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEECCSC
T ss_pred -----CCCCH-----HHHHhcCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEECCCC
Confidence 00011 24567899999999888777766655433 35567776654
No 128
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.97 E-value=0.5 Score=53.06 Aligned_cols=75 Identities=20% Similarity=0.213 Sum_probs=53.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCc--EEEEEe
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV--VLSTLT 190 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V--~v~~~~ 190 (1099)
..+|.|+|+|.+|+.+|..|+..|+ ++++++|.+ ..|++..+.-|+...|.. .+....
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v~i~~ 65 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPVKTSY 65 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc-------------------hHHHHHHHHHHHhccccccCCeEEEe
Confidence 4689999999999999999999997 689999842 236666555566544432 222233
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
.. .+-+.+.|+||.+..
T Consensus 66 ~~--~~a~~~aDvVvi~ag 82 (326)
T 3pqe_A 66 GT--YEDCKDADIVCICAG 82 (326)
T ss_dssp EC--GGGGTTCSEEEECCS
T ss_pred Cc--HHHhCCCCEEEEecc
Confidence 22 346789999998853
No 129
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=90.96 E-value=0.83 Score=50.48 Aligned_cols=72 Identities=15% Similarity=0.123 Sum_probs=51.6
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHH----hCCCcEEEEEe
Q 001331 116 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 190 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~e----LNp~V~v~~~~ 190 (1099)
||.|+|+|++|+.+|-.|+..|. +++.|+|- -+.|++..+--|+. ++...++....
T Consensus 2 KV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di-------------------~~~~~~G~a~DL~h~~~~~~~~~~i~~~~ 62 (294)
T 2x0j_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDI-------------------AEDLAVGEAMDLAHAAAGIDKYPKIVGGA 62 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECS-------------------SHHHHHHHHHHHHHHHGGGTCCCEEEEES
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeC-------------------CCCcchhhhhhhhcccccCCCCCeEecCC
Confidence 79999999999999999999985 88999983 22355555555554 34445555432
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
+.+.+.+.|+||++..
T Consensus 63 ---d~~~~~~aDvVvitAG 78 (294)
T 2x0j_A 63 ---DYSLLKGSEIIVVTAG 78 (294)
T ss_dssp ---CGGGGTTCSEEEECCC
T ss_pred ---CHHHhCCCCEEEEecC
Confidence 2346889999998754
No 130
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=90.92 E-value=0.46 Score=52.89 Aligned_cols=115 Identities=10% Similarity=0.093 Sum_probs=67.9
Q ss_pred HHHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCC
Q 001331 506 QKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP 584 (1099)
Q Consensus 506 q~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np 584 (1099)
+..+..++|+|.| .|.||..+++.|+..|. +++++|...-. ... ....+....+
T Consensus 20 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~---------------~~~----~~~~~~~~~~ 74 (351)
T 3ruf_A 20 QLIFSPKTWLITGVAGFIGSNLLEKLLKLNQ------VVIGLDNFSTG---------------HQY----NLDEVKTLVS 74 (351)
T ss_dssp HHHHSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSC---------------CHH----HHHHHHHTSC
T ss_pred hCCCCCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCCCC---------------chh----hhhhhhhccc
Confidence 3457789999999 58999999999999997 77777643210 000 1111222111
Q ss_pred C---CeEEEEecccCcccccccchhhhcCCCEEEEccCc-----------------hHHHHHHHhhcccccc-cEEEcCc
Q 001331 585 R---LNIEALQNRVGPETENVFDDTFWENITCVINALDN-----------------VNARLYVDQRCLYFQK-PLLESGT 643 (1099)
Q Consensus 585 ~---~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn-----------------~~ar~~i~~~c~~~~~-Pli~sgt 643 (1099)
. -+++.+...+.... .+ ...++++|+||++... +.+-..+-+.|.+.++ .+|..++
T Consensus 75 ~~~~~~~~~~~~Dl~d~~-~~--~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS 151 (351)
T 3ruf_A 75 TEQWSRFCFIEGDIRDLT-TC--EQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAAS 151 (351)
T ss_dssp HHHHTTEEEEECCTTCHH-HH--HHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cccCCceEEEEccCCCHH-HH--HHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEec
Confidence 0 24556666665422 12 3456789999998753 1122335666766664 5666665
Q ss_pred Ccccc
Q 001331 644 LGAKC 648 (1099)
Q Consensus 644 ~G~~G 648 (1099)
.+.+|
T Consensus 152 ~~vyg 156 (351)
T 3ruf_A 152 SSTYG 156 (351)
T ss_dssp GGGGT
T ss_pred HHhcC
Confidence 55444
No 131
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.89 E-value=0.55 Score=52.43 Aligned_cols=77 Identities=19% Similarity=0.123 Sum_probs=52.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh----CCCcEEE
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL----NNAVVLS 187 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL----Np~V~v~ 187 (1099)
++..+|.|+|+|.+|+.+|..|+..|++.++|+|.+.. ..|++.....|... ....+|.
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~-----------------~~~~~g~a~dl~~~~~~~~~~~~i~ 68 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQL-----------------ENPTKGKALDMLEASPVQGFDANII 68 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGG-----------------HHHHHHHHHHHHHHHHHHTCCCCEE
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccch-----------------HHHHHHhhhhHHHhhhhccCCCEEE
Confidence 45679999999999999999999999989999996420 11233322333322 2344555
Q ss_pred EEecCCChhhccCCcEEEEec
Q 001331 188 TLTSKLTKEQLSDFQAVVFTD 208 (1099)
Q Consensus 188 ~~~~~l~~~~l~~~dvVV~~~ 208 (1099)
.... .+-+.+.|+||.+.
T Consensus 69 ~t~d---~~a~~~aDvVIiaa 86 (315)
T 3tl2_A 69 GTSD---YADTADSDVVVITA 86 (315)
T ss_dssp EESC---GGGGTTCSEEEECC
T ss_pred EcCC---HHHhCCCCEEEEeC
Confidence 4322 35688999999985
No 132
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=90.87 E-value=0.46 Score=51.17 Aligned_cols=64 Identities=20% Similarity=0.190 Sum_probs=47.2
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
|.++.++|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+....+..+
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~ 60 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA------AVAFCARD-------------------GERLRAAESALRQRFPGAR 60 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHHSTTCC
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHHhcCCce
Confidence 5677888998 68999999999999998 78887743 2345556666666666666
Q ss_pred EEEEecccCc
Q 001331 588 IEALQNRVGP 597 (1099)
Q Consensus 588 i~~~~~~v~~ 597 (1099)
+..+...+..
T Consensus 61 ~~~~~~Dv~~ 70 (265)
T 3lf2_A 61 LFASVCDVLD 70 (265)
T ss_dssp EEEEECCTTC
T ss_pred EEEEeCCCCC
Confidence 7777666654
No 133
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=90.85 E-value=0.74 Score=48.24 Aligned_cols=38 Identities=32% Similarity=0.573 Sum_probs=31.2
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+.+++|+|.| .|+||.++++.|+..|.. .+++++|.+
T Consensus 15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~----~~V~~~~r~ 53 (242)
T 2bka_A 15 RMQNKSVFILGASGETGRVLLKEILEQGLF----SKVTLIGRR 53 (242)
T ss_dssp HHTCCEEEEECTTSHHHHHHHHHHHHHTCC----SEEEEEESS
T ss_pred hhcCCeEEEECCCcHHHHHHHHHHHcCCCC----CEEEEEEcC
Confidence 36678999999 699999999999999861 278888754
No 134
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=90.83 E-value=0.73 Score=50.34 Aligned_cols=33 Identities=33% Similarity=0.388 Sum_probs=29.8
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
-.+|.|||+|.+|+.+|..|+.+|. .++++|.+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~ 36 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDIN 36 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 3689999999999999999999998 89998854
No 135
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.72 E-value=0.39 Score=53.17 Aligned_cols=36 Identities=8% Similarity=0.326 Sum_probs=32.5
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+..++|+|+|+|++|..++..|+..|+ .+|+|+|.+
T Consensus 139 l~~~~vlVlGaGg~g~aia~~L~~~G~-----~~V~v~nR~ 174 (297)
T 2egg_A 139 LDGKRILVIGAGGGARGIYFSLLSTAA-----ERIDMANRT 174 (297)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-----SEEEEECSS
T ss_pred CCCCEEEEECcHHHHHHHHHHHHHCCC-----CEEEEEeCC
Confidence 567899999999999999999999999 899998644
No 136
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.70 E-value=0.67 Score=49.86 Aligned_cols=80 Identities=18% Similarity=0.133 Sum_probs=50.9
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
+...+|.|||+|.+|..+++.|...|...++++|.+. .+++.+.+.+ .+.+ . .
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~-------------------~~~~~~~~~~-----g~~~--~-~ 60 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE-------------------ESARELAQKV-----EAEY--T-T 60 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH-------------------HHHHHHHHHT-----TCEE--E-S
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH-------------------HHHHHHHHHc-----CCce--e-C
Confidence 3446899999999999999999999986688887422 1333322221 1222 1 1
Q ss_pred CCChhhccCCcEEEEecCCHHHHHHHHH
Q 001331 192 KLTKEQLSDFQAVVFTDISLDKAIEFDD 219 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~~~~~~~~~ln~ 219 (1099)
++ ++.+.+.|+||.|..+......+.+
T Consensus 61 ~~-~~~~~~~Dvvi~av~~~~~~~v~~~ 87 (266)
T 3d1l_A 61 DL-AEVNPYAKLYIVSLKDSAFAELLQG 87 (266)
T ss_dssp CG-GGSCSCCSEEEECCCHHHHHHHHHH
T ss_pred CH-HHHhcCCCEEEEecCHHHHHHHHHH
Confidence 11 2456789999999876544333333
No 137
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=90.70 E-value=0.28 Score=54.60 Aligned_cols=37 Identities=16% Similarity=0.288 Sum_probs=27.3
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.+..++|+|.|+ |.||..+++.|+..|.. -+++.+|.
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~----~~v~~~~~ 58 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYET----YKIINFDA 58 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTT----EEEEEEEC
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCC----cEEEEEec
Confidence 355678999997 99999999999999930 15666654
No 138
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=90.69 E-value=1.1 Score=50.34 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=50.5
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHH----HHHhCCCcEEEE
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQK----LQELNNAVVLST 188 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~----L~eLNp~V~v~~ 188 (1099)
...+|.|+|+|.+|+.+|..|+..|...++|+|.+. .+++..... +..+....++..
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~ 73 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE-------------------GVPQGKALDLNHCMALIGSPAKIFG 73 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH-------------------HHHHHHHHHHHhHhhccCCCCEEEE
Confidence 346899999999999999999999995699998642 122222222 222333455665
Q ss_pred EecCCChhhccCCcEEEEec
Q 001331 189 LTSKLTKEQLSDFQAVVFTD 208 (1099)
Q Consensus 189 ~~~~l~~~~l~~~dvVV~~~ 208 (1099)
..+ + +-+.+.|+||.+.
T Consensus 74 t~d-~--~al~~aD~VI~av 90 (328)
T 2hjr_A 74 ENN-Y--EYLQNSDVVIITA 90 (328)
T ss_dssp ESC-G--GGGTTCSEEEECC
T ss_pred CCC-H--HHHCCCCEEEEcC
Confidence 432 3 4578999999986
No 139
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=90.68 E-value=0.34 Score=54.57 Aligned_cols=106 Identities=12% Similarity=0.121 Sum_probs=64.8
Q ss_pred HHHHHhhcCeEEEEc-CChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCc
Q 001331 107 ETMRRLFASNILVSG-MQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV 184 (1099)
Q Consensus 107 e~q~kL~~s~VlIiG-~gglG~EiaKnLvla-GVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V 184 (1099)
.++..|...+|||.| .|.+|+.+++.|... |. +|+++|...-....+.. .+
T Consensus 17 ~~~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~------------------------~~-- 69 (372)
T 3slg_A 17 QGPGSMKAKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVK------------------------HE-- 69 (372)
T ss_dssp ------CCCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGG------------------------ST--
T ss_pred cCCcccCCCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhcc------------------------CC--
Confidence 355667788999999 599999999999998 65 78888764311111100 12
Q ss_pred EEEEEecCCC-h-----hhccCCcEEEEecC--CHH---------------HHHHHHHHHHhcCCCceeEEEeecceeEE
Q 001331 185 VLSTLTSKLT-K-----EQLSDFQAVVFTDI--SLD---------------KAIEFDDFCHNHQPAISFIKAEVRGLFGS 241 (1099)
Q Consensus 185 ~v~~~~~~l~-~-----~~l~~~dvVV~~~~--~~~---------------~~~~ln~~c~~~~~~ipfI~~~~~G~~G~ 241 (1099)
.++....+++ + +.+.++|+||-+.. ... ....+-+.|++.+ ..||.+++.+.+|.
T Consensus 70 ~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~ 147 (372)
T 3slg_A 70 RMHFFEGDITINKEWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGM 147 (372)
T ss_dssp TEEEEECCTTTCHHHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBS
T ss_pred CeEEEeCccCCCHHHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCC
Confidence 3444455554 2 23557888886432 111 1135677888888 78999888877664
No 140
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.58 E-value=0.71 Score=51.89 Aligned_cols=73 Identities=16% Similarity=0.208 Sum_probs=51.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC---CCcEEEEE
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTL 189 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN---p~V~v~~~ 189 (1099)
..+|.|+|+|.+|+.+|..|+..|+ +.++|+|-+ ..|++..+.-|+... +...+...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~-------------------~~~~~g~a~DL~~~~~~~~~~~i~~t 81 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVM-------------------EDKLKGEMMDLEHGSLFLHTAKIVSG 81 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC-------------------HHHHHHHHHHHHHHGGGSCCSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC-------------------HHHHHHHHHHhhhhhhcccCCeEEEc
Confidence 4689999999999999999999997 689999852 224444444444332 23455433
Q ss_pred ecCCChhhccCCcEEEEec
Q 001331 190 TSKLTKEQLSDFQAVVFTD 208 (1099)
Q Consensus 190 ~~~l~~~~l~~~dvVV~~~ 208 (1099)
.++. .+.+.|+||.+.
T Consensus 82 -~d~~--~~~daDiVIita 97 (330)
T 3ldh_A 82 -KDYS--VSAGSKLVVITA 97 (330)
T ss_dssp -SSSC--SCSSCSEEEECC
T ss_pred -CCHH--HhCCCCEEEEeC
Confidence 3333 388999999874
No 141
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=90.57 E-value=0.57 Score=50.69 Aligned_cols=65 Identities=15% Similarity=0.220 Sum_probs=44.4
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
.+.+++|+|.| .|+||.++++.|+..|. +++++|.+. .+.+.+++.+.......
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~ 83 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL------KVVGCARTV-------------------GNIEELAAECKSAGYPG 83 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHTTCSS
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEECCh-------------------HHHHHHHHHHHhcCCCc
Confidence 36778899997 78999999999999997 788776431 23344455555544334
Q ss_pred eEEEEecccCc
Q 001331 587 NIEALQNRVGP 597 (1099)
Q Consensus 587 ~i~~~~~~v~~ 597 (1099)
++..+...+..
T Consensus 84 ~~~~~~~Dl~~ 94 (279)
T 1xg5_A 84 TLIPYRCDLSN 94 (279)
T ss_dssp EEEEEECCTTC
T ss_pred eEEEEEecCCC
Confidence 56666655553
No 142
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=90.52 E-value=0.31 Score=53.41 Aligned_cols=80 Identities=15% Similarity=0.190 Sum_probs=51.6
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
+.+++++|+| +||+|..+++.|+..|. +++++|.+ ..|++.+++.+... +.+.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~------~V~i~~R~-------------------~~~~~~l~~~~~~~-~~~~ 170 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA------EVVLCGRK-------------------LDKAQAAADSVNKR-FKVN 170 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEEESS-------------------HHHHHHHHHHHHHH-HTCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC------EEEEEECC-------------------HHHHHHHHHHHHhc-CCcE
Confidence 5678999999 99999999999999998 48887632 13455555555432 2232
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEccC
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINALD 619 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD 619 (1099)
+... .+... +.+ .+.++.+|+||++..
T Consensus 171 ~~~~--D~~~~-~~~--~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 171 VTAA--ETADD-ASR--AEAVKGAHFVFTAGA 197 (287)
T ss_dssp CEEE--ECCSH-HHH--HHHTTTCSEEEECCC
T ss_pred EEEe--cCCCH-HHH--HHHHHhCCEEEECCC
Confidence 2222 22221 111 245677899999963
No 143
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=90.49 E-value=0.51 Score=51.51 Aligned_cols=32 Identities=16% Similarity=0.532 Sum_probs=27.6
Q ss_pred CcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY------EVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC------EEEEEeCC
Confidence 47999997 9999999999999997 78887643
No 144
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.49 E-value=0.41 Score=51.69 Aligned_cols=97 Identities=10% Similarity=0.003 Sum_probs=59.8
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
.++|+|.|+|.||..+++.|+..|. ++++++.+. .+...+. . + .++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~------~V~~~~r~~-------------------~~~~~~~----~--~--~~~~ 51 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW------RIIGTSRNP-------------------DQMEAIR----A--S--GAEP 51 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC------EEEEEESCG-------------------GGHHHHH----H--T--TEEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC------EEEEEEcCh-------------------hhhhhHh----h--C--CCeE
Confidence 4789999999999999999999997 777775321 1111111 1 2 3555
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCch----HHHHHHHhhccc--cc-ccEEEcCcCcccc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNV----NARLYVDQRCLY--FQ-KPLLESGTLGAKC 648 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~----~ar~~i~~~c~~--~~-~Pli~sgt~G~~G 648 (1099)
+...+.. + + +.++|+||++.... .....+-+.|.. .+ +.+|..++.+.+|
T Consensus 52 ~~~D~~d-----~--~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 52 LLWPGEE-----P--S-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYLSTTAVYG 108 (286)
T ss_dssp EESSSSC-----C--C-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEEEEGGGGC
T ss_pred EEecccc-----c--c-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEeecceecC
Confidence 5554433 2 2 67899999988422 222344455555 33 4466666655544
No 145
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=90.46 E-value=1.2 Score=49.38 Aligned_cols=71 Identities=24% Similarity=0.305 Sum_probs=49.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC---CCcEEEEEec
Q 001331 116 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLTS 191 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN---p~V~v~~~~~ 191 (1099)
+|.|+|+|.+|..++..|+..|. +.++++|.+. .|++.....+...+ +.+++.. .
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE-------------------DRAQAEAEDIAHAAPVSHGTRVWH--G 60 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHTTSCCTTSCCEEEE--E
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH-------------------HHHHHHHHhhhhhhhhcCCeEEEE--C
Confidence 79999999999999999999984 5799998642 13333333333333 3455554 2
Q ss_pred CCChhhccCCcEEEEecC
Q 001331 192 KLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~~ 209 (1099)
+.+-+.+.|+||.+..
T Consensus 61 --~~~a~~~aDvVIi~~~ 76 (304)
T 2v6b_A 61 --GHSELADAQVVILTAG 76 (304)
T ss_dssp --CGGGGTTCSEEEECC-
T ss_pred --CHHHhCCCCEEEEcCC
Confidence 2345889999999874
No 146
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=90.36 E-value=0.29 Score=52.77 Aligned_cols=93 Identities=11% Similarity=0.110 Sum_probs=58.3
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
+.+.+|.|||+|.+|+.+++.|+..|. ..++++|.+. .+++.+++.+ .+.
T Consensus 8 ~~~m~i~iiG~G~mG~~~a~~l~~~g~-----~~v~~~~~~~-------------------~~~~~~~~~~-----g~~- 57 (266)
T 3d1l_A 8 IEDTPIVLIGAGNLATNLAKALYRKGF-----RIVQVYSRTE-------------------ESARELAQKV-----EAE- 57 (266)
T ss_dssp GGGCCEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSSH-------------------HHHHHHHHHT-----TCE-
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHCCC-----eEEEEEeCCH-------------------HHHHHHHHHc-----CCc-
Confidence 445799999999999999999999997 3377776432 1222222211 122
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhccc--ccccEEEcC
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY--FQKPLLESG 642 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~--~~~Pli~sg 642 (1099)
.. .+. .+.++++|+||.|+-....+..+..+... .+..+++..
T Consensus 58 -~~-----~~~-----~~~~~~~Dvvi~av~~~~~~~v~~~l~~~~~~~~ivv~~s 102 (266)
T 3d1l_A 58 -YT-----TDL-----AEVNPYAKLYIVSLKDSAFAELLQGIVEGKREEALMVHTA 102 (266)
T ss_dssp -EE-----SCG-----GGSCSCCSEEEECCCHHHHHHHHHHHHTTCCTTCEEEECC
T ss_pred -ee-----CCH-----HHHhcCCCEEEEecCHHHHHHHHHHHHhhcCCCcEEEECC
Confidence 11 111 23457899999999877766666554332 355566543
No 147
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=90.31 E-value=0.45 Score=51.84 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=51.7
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
.+.+++|+|.| .||||.++++.|+..|. +++++|.+ ..|.+.+++.+.+.++ -
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~------~V~~~~r~-------------------~~~~~~~~~~l~~~~~-~ 62 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGI------MVVLTCRD-------------------VTKGHEAVEKLKNSNH-E 62 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHTTTC-C
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCC------EEEEEeCC-------------------HHHHHHHHHHHHhcCC-C
Confidence 35677888888 58999999999999997 78887643 2344455566655543 3
Q ss_pred eEEEEecccCcccccc---cc--hhhhcCCCEEEEcc
Q 001331 587 NIEALQNRVGPETENV---FD--DTFWENITCVINAL 618 (1099)
Q Consensus 587 ~i~~~~~~v~~~~e~~---~~--~~~~~~~DvVi~al 618 (1099)
++..+...+....+.+ +. .+.+...|++|++.
T Consensus 63 ~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nA 99 (311)
T 3o26_A 63 NVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNA 99 (311)
T ss_dssp SEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECC
T ss_pred ceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECC
Confidence 5666666665431111 10 01134677777764
No 148
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=90.28 E-value=0.47 Score=53.22 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=31.4
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+...||.|+|+|.+|+.++..|+..|+ +.++++|-+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~-----~~v~L~Di~ 40 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKEL-----GDVVLFDIA 40 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 456799999999999999999999998 589999854
No 149
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=90.14 E-value=0.29 Score=53.49 Aligned_cols=37 Identities=22% Similarity=0.408 Sum_probs=30.0
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 508 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 508 ~L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
.+..++|+|.|+ |.||..+++.|+..|. +++++|...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE------EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC------EEEEEecCC
Confidence 456789999997 9999999999999997 788887654
No 150
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=90.14 E-value=0.46 Score=53.10 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=64.7
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhh-CCCC
Q 001331 509 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSI-NPRL 586 (1099)
Q Consensus 509 L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~-np~~ 586 (1099)
+..++|+|.|+ |.||..+++.|+..|. +++++|...-. ...+...+++.+... .+
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~-- 81 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ------KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWS-- 81 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHT--
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCCcc---------------chhhHHHHhhhcccccCC--
Confidence 66789999997 9999999999999987 78887643210 001111122111110 12
Q ss_pred eEEEEecccCcccccccchhhhcCCCEEEEccCch-----------------HHHHHHHhhcccccc-cEEEcCcCccc
Q 001331 587 NIEALQNRVGPETENVFDDTFWENITCVINALDNV-----------------NARLYVDQRCLYFQK-PLLESGTLGAK 647 (1099)
Q Consensus 587 ~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~-----------------~ar~~i~~~c~~~~~-Pli~sgt~G~~ 647 (1099)
+++.+...+.... .+ .+.++++|+||++.... .+-..+-+.|...++ .+|..++.+.+
T Consensus 82 ~~~~~~~Dl~d~~-~~--~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~ 157 (352)
T 1sb8_A 82 NFKFIQGDIRNLD-DC--NNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTY 157 (352)
T ss_dssp TEEEEECCTTSHH-HH--HHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGG
T ss_pred ceEEEECCCCCHH-HH--HHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhc
Confidence 4555555555321 12 34567899999986521 122345566666664 36655554443
No 151
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=90.13 E-value=0.14 Score=56.06 Aligned_cols=82 Identities=10% Similarity=0.183 Sum_probs=52.5
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
..+|.|||+|.+|+.+++.|+..|. +..+++++|.+. .|.+.+++. . .++ .
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~---~~~~V~v~dr~~-------------------~~~~~l~~~----~-gi~--~ 53 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGY---DPNRICVTNRSL-------------------DKLDFFKEK----C-GVH--T 53 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTC---CGGGEEEECSSS-------------------HHHHHHHHT----T-CCE--E
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCC---CCCeEEEEeCCH-------------------HHHHHHHHH----c-CCE--E
Confidence 4689999999999999999999996 124788877432 122222221 1 122 1
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRC 631 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c 631 (1099)
. .+. .+.+++.|+||-|+-....+..+.++.
T Consensus 54 ~-----~~~-----~~~~~~aDvVilav~p~~~~~vl~~l~ 84 (280)
T 3tri_A 54 T-----QDN-----RQGALNADVVVLAVKPHQIKMVCEELK 84 (280)
T ss_dssp E-----SCH-----HHHHSSCSEEEECSCGGGHHHHHHHHH
T ss_pred e-----CCh-----HHHHhcCCeEEEEeCHHHHHHHHHHHH
Confidence 1 111 245688999999996655555555544
No 152
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=90.06 E-value=1.4 Score=48.65 Aligned_cols=110 Identities=18% Similarity=0.219 Sum_probs=64.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh--CCCcEEEEEec
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL--NNAVVLSTLTS 191 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL--Np~V~v~~~~~ 191 (1099)
+.||.+||+|-.|..+|+||+.+|. .++++|.+.-....+... |-..++ .+.++ ..++-+.....
T Consensus 5 s~kIgfIGLG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~--------G~~~~~----s~~e~~~~~dvvi~~l~~ 71 (297)
T 4gbj_A 5 SEKIAFLGLGNLGTPIAEILLEAGY-ELVVWNRTASKAEPLTKL--------GATVVE----NAIDAITPGGIVFSVLAD 71 (297)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTC-EEEEC-------CTTTTT--------TCEECS----SGGGGCCTTCEEEECCSS
T ss_pred CCcEEEEecHHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHc--------CCeEeC----CHHHHHhcCCceeeeccc
Confidence 4689999999999999999999997 789998654333333211 111110 11122 12333333222
Q ss_pred C------CCh---hhccCCcEEEEec-CCHHHHHHHHHHHHhcCCCceeEEEeecce
Q 001331 192 K------LTK---EQLSDFQAVVFTD-ISLDKAIEFDDFCHNHQPAISFIKAEVRGL 238 (1099)
Q Consensus 192 ~------l~~---~~l~~~dvVV~~~-~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~ 238 (1099)
. +.. ..+..-++||++. .++....++.+.+.+++ +-|+.+.+.|-
T Consensus 72 ~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g--~~~ldapVsGg 126 (297)
T 4gbj_A 72 DAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYG--AHYVGAPIFAR 126 (297)
T ss_dssp HHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEECCEECC
T ss_pred hhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcC--CceecCCcCCC
Confidence 1 111 1233445667654 57888889999999999 99998877663
No 153
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.01 E-value=0.21 Score=48.54 Aligned_cols=88 Identities=11% Similarity=0.122 Sum_probs=54.9
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
+.+|+|+|+|.+|..+++.|...|. .++++|.|.= +.+ .+.+ .++. .
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~------~v~vid~~~~-------------------~~~----~~~~--~g~~--~ 53 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI------PLVVIETSRT-------------------RVD----ELRE--RGVR--A 53 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC------CEEEEESCHH-------------------HHH----HHHH--TTCE--E
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEECCHH-------------------HHH----HHHH--cCCC--E
Confidence 3589999999999999999999998 8999986531 111 2222 1232 2
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhccc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLY 633 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~ 633 (1099)
+...... +..+...-.+++|+||.++++...-..+-..++.
T Consensus 54 i~gd~~~--~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~ 94 (140)
T 3fwz_A 54 VLGNAAN--EEIMQLAHLECAKWLILTIPNGYEAGEIVASARA 94 (140)
T ss_dssp EESCTTS--HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHH
T ss_pred EECCCCC--HHHHHhcCcccCCEEEEECCChHHHHHHHHHHHH
Confidence 3332222 1112122246899999999987655544444433
No 154
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.01 E-value=1.5 Score=48.63 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=50.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHH----hCCCcEEEEEe
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 190 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~e----LNp~V~v~~~~ 190 (1099)
.+|.|+|+|.+|..++..|+..|.-.++|+|-+. .|++.....|.+ ....+++....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~~i~~t~ 63 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE-------------------GVPQGKALDLYEASPIEGFDVRVTGTN 63 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCCEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc-------------------cHHHHHHHhHHHhHhhcCCCeEEEECC
Confidence 5899999999999999999999974599998532 133322233333 34456666543
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
. . +-+.+.|+||.+..
T Consensus 64 d-~--~a~~~aD~Vi~a~g 79 (309)
T 1ur5_A 64 N-Y--ADTANSDVIVVTSG 79 (309)
T ss_dssp C-G--GGGTTCSEEEECCC
T ss_pred C-H--HHHCCCCEEEEcCC
Confidence 3 3 45789999999863
No 155
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=89.97 E-value=0.39 Score=51.37 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=45.5
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCC-
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR- 585 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~- 585 (1099)
.+.++.++|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+.+.++.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~~~ 58 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY------RVVLIARS-------------------KQNLEKVHDEIMRSNKHV 58 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC------EEEEEESC-------------------HHHHHHHHHHHHHHCTTS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHHhcccc
Confidence 35677888888 58999999999999997 78887743 23455566666666554
Q ss_pred CeEEEEecccCc
Q 001331 586 LNIEALQNRVGP 597 (1099)
Q Consensus 586 ~~i~~~~~~v~~ 597 (1099)
.++..+...+..
T Consensus 59 ~~~~~~~~Dv~~ 70 (250)
T 3nyw_A 59 QEPIVLPLDITD 70 (250)
T ss_dssp CCCEEEECCTTC
T ss_pred CcceEEeccCCC
Confidence 455555555543
No 156
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=89.95 E-value=0.5 Score=53.00 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=32.0
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
.|.+++|.|||+|.+|..+++.|...|+ +++.+|...
T Consensus 137 ~l~g~tvGIIGlG~IG~~vA~~l~~~G~------~V~~~dr~~ 173 (324)
T 3hg7_A 137 GLKGRTLLILGTGSIGQHIAHTGKHFGM------KVLGVSRSG 173 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred ccccceEEEEEECHHHHHHHHHHHhCCC------EEEEEcCCh
Confidence 3566799999999999999999999998 788887643
No 157
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=89.85 E-value=0.46 Score=55.95 Aligned_cols=106 Identities=8% Similarity=0.132 Sum_probs=73.3
Q ss_pred hhhhcCHHHHHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHH
Q 001331 497 QISVFGAKLQKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAA 576 (1099)
Q Consensus 497 qi~l~G~~~q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa 576 (1099)
-...||... -..++|+|+|.|-+|..+++.|-. + .++.|++.|. .|++.++
T Consensus 224 ~~~~~g~~~---~~~~~v~I~GgG~ig~~lA~~L~~-~------~~v~iIE~d~-------------------~r~~~la 274 (461)
T 4g65_A 224 VMSELQRLE---KPYRRIMIVGGGNIGASLAKRLEQ-T------YSVKLIERNL-------------------QRAEKLS 274 (461)
T ss_dssp HHHHTTGGG---SCCCEEEEECCSHHHHHHHHHHTT-T------SEEEEEESCH-------------------HHHHHHH
T ss_pred HHHhhcccc---ccccEEEEEcchHHHHHHHHHhhh-c------CceEEEecCH-------------------HHHHHHH
Confidence 334555432 134689999999999999999842 3 4788887553 3445555
Q ss_pred HHHHhhCCCCeEEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEE
Q 001331 577 SAATSINPRLNIEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLL 639 (1099)
Q Consensus 577 ~~l~~~np~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli 639 (1099)
+. .|+.. .++...++ .+++.++-.+++|+++.++++-+.-..+..++.+++.+-+
T Consensus 275 ~~----l~~~~--Vi~GD~td--~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kv 329 (461)
T 4g65_A 275 EE----LENTI--VFCGDAAD--QELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKV 329 (461)
T ss_dssp HH----CTTSE--EEESCTTC--HHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEE
T ss_pred HH----CCCce--EEeccccc--hhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccc
Confidence 43 45543 33333332 3455566778999999999999999999999998887744
No 158
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=89.79 E-value=0.6 Score=49.59 Aligned_cols=63 Identities=14% Similarity=0.258 Sum_probs=43.5
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
++.+++|+|.| .||||.++++.|+..|. +++++|.+ ..+.+.+++.+....+
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~-- 58 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA------AVVVADIN-------------------AEAAEAVAKQIVADGG-- 58 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEcCC-------------------HHHHHHHHHHHHhcCC--
Confidence 35678899998 58999999999999998 78887643 2344445555554443
Q ss_pred eEEEEecccCc
Q 001331 587 NIEALQNRVGP 597 (1099)
Q Consensus 587 ~i~~~~~~v~~ 597 (1099)
++..+...+..
T Consensus 59 ~~~~~~~D~~~ 69 (253)
T 3qiv_A 59 TAISVAVDVSD 69 (253)
T ss_dssp EEEEEECCTTS
T ss_pred cEEEEEccCCC
Confidence 55555555553
No 159
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.78 E-value=0.58 Score=50.94 Aligned_cols=71 Identities=11% Similarity=0.256 Sum_probs=50.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
+..++|+|+|+||+|..++..|...| .+|++++.+. .|++.+.+.+.... .+....
T Consensus 117 ~~~~~vlvlGaGg~g~a~a~~L~~~G-~~v~v~~R~~-------------------~~a~~l~~~~~~~~---~~~~~~- 172 (272)
T 1p77_A 117 RPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTF-------------------SKTKELAERFQPYG---NIQAVS- 172 (272)
T ss_dssp CTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSH-------------------HHHHHHHHHHGGGS---CEEEEE-
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCC-CEEEEEECCH-------------------HHHHHHHHHccccC---CeEEee-
Confidence 56789999999999999999999999 8999988532 36666666654321 222221
Q ss_pred CCChhhc--cCCcEEEEecC
Q 001331 192 KLTKEQL--SDFQAVVFTDI 209 (1099)
Q Consensus 192 ~l~~~~l--~~~dvVV~~~~ 209 (1099)
+ +.+ .++|+||.|+.
T Consensus 173 -~--~~~~~~~~DivIn~t~ 189 (272)
T 1p77_A 173 -M--DSIPLQTYDLVINATS 189 (272)
T ss_dssp -G--GGCCCSCCSEEEECCC
T ss_pred -H--HHhccCCCCEEEECCC
Confidence 1 122 37899998875
No 160
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.77 E-value=0.68 Score=49.88 Aligned_cols=97 Identities=9% Similarity=0.042 Sum_probs=63.7
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
..+|+|.|+|.+|..+++.|...|. +|+.++.+. .++. .+.. + .++....++
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~----~~~~--~--~~~~~~~D~ 56 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNP-------------------DQME----AIRA--S--GAEPLLWPG 56 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCG-------------------GGHH----HHHH--T--TEEEEESSS
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcCh-------------------hhhh----hHhh--C--CCeEEEecc
Confidence 3689999999999999999999996 677776422 1111 1222 2 244444444
Q ss_pred Ch-hhccCCcEEEEecCC----HHHHHHHHHHHHh--cCCCceeEEEeecceeE
Q 001331 194 TK-EQLSDFQAVVFTDIS----LDKAIEFDDFCHN--HQPAISFIKAEVRGLFG 240 (1099)
Q Consensus 194 ~~-~~l~~~dvVV~~~~~----~~~~~~ln~~c~~--~~~~ipfI~~~~~G~~G 240 (1099)
++ + +.++|+||.+... ......+-+.|++ .+ ...||.+++.+.+|
T Consensus 57 ~d~~-~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg 108 (286)
T 3ius_A 57 EEPS-LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQ-FRWVGYLSTTAVYG 108 (286)
T ss_dssp SCCC-CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGG-CSEEEEEEEGGGGC
T ss_pred cccc-cCCCCEEEECCCccccccHHHHHHHHHHHhhcCC-ceEEEEeecceecC
Confidence 32 2 7789999987542 2233566677877 44 13688888888776
No 161
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=89.70 E-value=1.2 Score=45.96 Aligned_cols=91 Identities=14% Similarity=0.165 Sum_probs=60.0
Q ss_pred eEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC
Q 001331 116 NILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 194 (1099)
Q Consensus 116 ~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~ 194 (1099)
+|+|.| .|++|.++++.|...|. +|++++.+.-....+ + .++....+++
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~---------------------------~--~~~~~~~D~~ 51 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY---------------------------N--NVKAVHFDVD 51 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC---------------------------T--TEEEEECCTT
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc---------------------------C--CceEEEeccc
Confidence 799999 78999999999999995 788888654221111 2 2344444443
Q ss_pred h------hhccCCcEEEEecC---------CHHHHHHHHHHHHhcCCCc-eeEEEeecce
Q 001331 195 K------EQLSDFQAVVFTDI---------SLDKAIEFDDFCHNHQPAI-SFIKAEVRGL 238 (1099)
Q Consensus 195 ~------~~l~~~dvVV~~~~---------~~~~~~~ln~~c~~~~~~i-pfI~~~~~G~ 238 (1099)
+ +.+.++|+||.+.. +......+-+.|++.+ + .||..++.+.
T Consensus 52 d~~~~~~~~~~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~a~~~~~--~~~iv~~SS~~~ 109 (219)
T 3dqp_A 52 WTPEEMAKQLHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE--VKRFILLSTIFS 109 (219)
T ss_dssp SCHHHHHTTTTTCSEEEECCCCTTSSCCCCCCHHHHHHHHHHHHTT--CCEEEEECCTTT
T ss_pred CCHHHHHHHHcCCCEEEECCcCCCCCcEeEeHHHHHHHHHHHHHhC--CCEEEEECcccc
Confidence 2 24567888887653 2334557778888887 4 5666666443
No 162
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=89.69 E-value=1 Score=47.99 Aligned_cols=39 Identities=23% Similarity=0.198 Sum_probs=31.2
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 109 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 109 q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
...+...+|.|||+|.+|..+|++|+..|. .|+++|.+.
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~ 52 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDP 52 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCh
Confidence 357889999999999999999999999996 799998653
No 163
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.68 E-value=0.25 Score=53.95 Aligned_cols=33 Identities=24% Similarity=0.314 Sum_probs=31.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+++|+|+|+||.|..++..|...| .+|+|++.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt 150 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRS 150 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCC
Confidence 789999999999999999999999 999999754
No 164
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=89.62 E-value=0.76 Score=53.92 Aligned_cols=91 Identities=11% Similarity=0.192 Sum_probs=58.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhC-C--CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAG-V--KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaG-V--g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
..+|+|||+||+|+.++..|+..+ + ..|+++|.+.. ++.. .+.+ .+++....
T Consensus 13 ~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~----------------~~~~----~~~~-----g~~~~~~~ 67 (480)
T 2ph5_A 13 KNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGT----------------KVDV----AQQY-----GVSFKLQQ 67 (480)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCC----------------SCCH----HHHH-----TCEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchh----------------hhhH----Hhhc-----CCceeEEe
Confidence 578999999999999999999864 5 58999986443 1101 1111 23333322
Q ss_pred c---CC---ChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEE
Q 001331 191 S---KL---TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 232 (1099)
Q Consensus 191 ~---~l---~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~ 232 (1099)
- ++ -...+.+.|+||.+.... ....+-+.|.+.| +-+|+
T Consensus 68 Vdadnv~~~l~aLl~~~DvVIN~s~~~-~~l~Im~acleaG--v~YlD 112 (480)
T 2ph5_A 68 ITPQNYLEVIGSTLEENDFLIDVSIGI-SSLALIILCNQKG--ALYIN 112 (480)
T ss_dssp CCTTTHHHHTGGGCCTTCEEEECCSSS-CHHHHHHHHHHHT--CEEEE
T ss_pred ccchhHHHHHHHHhcCCCEEEECCccc-cCHHHHHHHHHcC--CCEEE
Confidence 1 11 112455569999765444 4457889999999 76664
No 165
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=89.61 E-value=0.82 Score=49.98 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=51.8
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCC--CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGV--KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGV--g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
...+|.|||+|.+|..++++|...|. ..|+++|.+. .+++.+.+. . .+. ...
T Consensus 2 ~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~-------------------~~~~~l~~~---~--gi~--~~~ 55 (280)
T 3tri_A 2 NTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL-------------------DKLDFFKEK---C--GVH--TTQ 55 (280)
T ss_dssp CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS-------------------HHHHHHHHT---T--CCE--EES
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH-------------------HHHHHHHHH---c--CCE--EeC
Confidence 45789999999999999999999996 2688887532 133322222 1 222 211
Q ss_pred cCCChhhccCCcEEEEecCCHHHHHHHHHHH
Q 001331 191 SKLTKEQLSDFQAVVFTDISLDKAIEFDDFC 221 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c 221 (1099)
. ..+.+.+.|+||.|..+......+.++.
T Consensus 56 ~--~~~~~~~aDvVilav~p~~~~~vl~~l~ 84 (280)
T 3tri_A 56 D--NRQGALNADVVVLAVKPHQIKMVCEELK 84 (280)
T ss_dssp C--HHHHHSSCSEEEECSCGGGHHHHHHHHH
T ss_pred C--hHHHHhcCCeEEEEeCHHHHHHHHHHHH
Confidence 1 2356778999999986544444444443
No 166
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=89.57 E-value=0.45 Score=53.14 Aligned_cols=35 Identities=26% Similarity=0.371 Sum_probs=30.8
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
|.+++|.|||+|.+|..+++.|...|+ +++.+|.+
T Consensus 137 l~g~tvGIiG~G~IG~~vA~~l~~~G~------~V~~~dr~ 171 (315)
T 3pp8_A 137 REEFSVGIMGAGVLGAKVAESLQAWGF------PLRCWSRS 171 (315)
T ss_dssp STTCCEEEECCSHHHHHHHHHHHTTTC------CEEEEESS
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHHCCC------EEEEEcCC
Confidence 566799999999999999999999988 78888754
No 167
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=89.53 E-value=0.18 Score=58.48 Aligned_cols=91 Identities=16% Similarity=0.195 Sum_probs=61.9
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
+.+|+|+|+|-+|..+++.|...|+ .++++|.|.- +++ .+++. ++. .
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~------~vvvId~d~~-------------------~v~----~~~~~--g~~--v 50 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV------KMVVLDHDPD-------------------HIE----TLRKF--GMK--V 50 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEECCHH-------------------HHH----HHHHT--TCC--C
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC------CEEEEECCHH-------------------HHH----HHHhC--CCe--E
Confidence 4589999999999999999999998 8999997742 111 11111 121 2
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQK 636 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~ 636 (1099)
+....+. ...+...-++++|+||.|+++...-..+-..++..+.
T Consensus 51 i~GDat~--~~~L~~agi~~A~~viv~~~~~~~n~~i~~~ar~~~p 94 (413)
T 3l9w_A 51 FYGDATR--MDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFP 94 (413)
T ss_dssp EESCTTC--HHHHHHTTTTTCSEEEECCSSHHHHHHHHHHHHHHCT
T ss_pred EEcCCCC--HHHHHhcCCCccCEEEECCCChHHHHHHHHHHHHhCC
Confidence 2222221 1222222357899999999999988888888887654
No 168
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.53 E-value=0.62 Score=49.05 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=60.1
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
...++|+|.| .|+||.++++.|+..|- -++++++.+.-....+ . . -.
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~-----~~V~~~~R~~~~~~~~-----~--------------------~--~~ 68 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQT-----IKQTLFARQPAKIHKP-----Y--------------------P--TN 68 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTT-----EEEEEEESSGGGSCSS-----C--------------------C--TT
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCC-----ceEEEEEcChhhhccc-----c--------------------c--CC
Confidence 3446899999 69999999999999992 2788877543211110 0 0 13
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEccCchHHH---HHHHhhcccccc-cEEEcCcCcc
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINALDNVNAR---LYVDQRCLYFQK-PLLESGTLGA 646 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar---~~i~~~c~~~~~-Pli~sgt~G~ 646 (1099)
++.+...+.+.. .+ ...++++|+||++....... ..+-..|.+.+. .+|..++.+.
T Consensus 69 ~~~~~~Dl~d~~-~~--~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 69 SQIIMGDVLNHA-AL--KQAMQGQDIVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCTTCHH-HH--HHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred cEEEEecCCCHH-HH--HHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEEEeccee
Confidence 555555555322 22 35678899999877543221 233445555553 3555555443
No 169
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=89.52 E-value=0.57 Score=48.61 Aligned_cols=90 Identities=8% Similarity=0.097 Sum_probs=54.1
Q ss_pred CcEEEEc-CCcchHHHHHHHH-HcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 512 AKVFIVG-SGALGCEFLKNVA-LMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La-~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
++|+|.| .|+||.++++.|+ ..|. ++++++.+.-+ +.+. +....+ ++.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~------~V~~~~r~~~~------------------~~~~----~~~~~~--~~~ 55 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM------HITLYGRQLKT------------------RIPP----EIIDHE--RVT 55 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC------EEEEEESSHHH------------------HSCH----HHHTST--TEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc------eEEEEecCccc------------------cchh----hccCCC--ceE
Confidence 3599999 5999999999999 8997 78887654110 1101 111222 455
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccC--chHHHHHHHhhccccc
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALD--NVNARLYVDQRCLYFQ 635 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alD--n~~ar~~i~~~c~~~~ 635 (1099)
.+...+.... .+ ...++++|+||++.. |+.++..+ ..|.+.+
T Consensus 56 ~~~~D~~d~~-~~--~~~~~~~d~vv~~ag~~n~~~~~~~-~~~~~~~ 99 (221)
T 3r6d_A 56 VIEGSFQNPG-XL--EQAVTNAEVVFVGAMESGSDMASIV-KALSRXN 99 (221)
T ss_dssp EEECCTTCHH-HH--HHHHTTCSEEEESCCCCHHHHHHHH-HHHHHTT
T ss_pred EEECCCCCHH-HH--HHHHcCCCEEEEcCCCCChhHHHHH-HHHHhcC
Confidence 6666665422 22 356689999999886 34433333 3444444
No 170
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=89.52 E-value=0.84 Score=50.72 Aligned_cols=36 Identities=19% Similarity=0.507 Sum_probs=28.5
Q ss_pred HHHhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 507 KKLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 507 ~~L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
..+..++|+|.|+ |.||..+++.|+..|. +++++|.
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r 59 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGH------EVTVVDN 59 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEEC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCC------EEEEEeC
Confidence 4566789999996 9999999999999987 7888764
No 171
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=89.51 E-value=0.76 Score=50.75 Aligned_cols=32 Identities=19% Similarity=0.247 Sum_probs=27.0
Q ss_pred CcEEEEcC-CcchHHHHHHHHHc-CCCCCCCccEEEecCC
Q 001331 512 AKVFIVGS-GALGCEFLKNVALM-GVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~-GglG~evlk~La~~-Gv~~~~~g~i~ivD~D 549 (1099)
++|+|.|+ |.||..+++.|+.. |. +++++|.+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~------~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHY------EVYGLDIG 34 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTC------EEEEEESC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCC------EEEEEeCC
Confidence 37999996 99999999999998 66 78888754
No 172
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=89.42 E-value=1.2 Score=49.25 Aligned_cols=74 Identities=23% Similarity=0.292 Sum_probs=48.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHH---HhCCCcEEEEE
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQ---ELNNAVVLSTL 189 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~---eLNp~V~v~~~ 189 (1099)
..+|+|+|+|++|+.++..|+..|. +.|+++|.+. .+++.....+. .+.+.+.+...
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~-------------------~~~~~~~~~~~~~~~~~~~~~v~~~ 67 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK-------------------ERVEAEVLDMQHGSSFYPTVSIDGS 67 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH-------------------HHHHHHHHHHHHTGGGSTTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHHHHhhhhhcCCeEEEeC
Confidence 4689999999999999999999995 4899998542 12221111111 12234555543
Q ss_pred ecCCChhhccCCcEEEEecC
Q 001331 190 TSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 190 ~~~l~~~~l~~~dvVV~~~~ 209 (1099)
. +.+.+.++|+||++..
T Consensus 68 ~---~~~~~~~aD~Vii~v~ 84 (319)
T 1lld_A 68 D---DPEICRDADMVVITAG 84 (319)
T ss_dssp S---CGGGGTTCSEEEECCC
T ss_pred C---CHHHhCCCCEEEECCC
Confidence 2 2345778999999873
No 173
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=89.39 E-value=0.48 Score=51.76 Aligned_cols=32 Identities=28% Similarity=0.441 Sum_probs=28.8
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~------~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC------SVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC------eEEEEcCC
Confidence 589999999999999999999997 78888754
No 174
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=89.33 E-value=1.8 Score=47.19 Aligned_cols=94 Identities=20% Similarity=0.199 Sum_probs=60.2
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 114 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 114 ~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
..+|||.| .|.+|..+++.|...|. +|+.++...-. ..+. .++....+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~-~~~~-----------------------------~~~~~~~D 50 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGN-KAIN-----------------------------DYEYRVSD 50 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC-----------------------------------CCEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCc-ccCC-----------------------------ceEEEEcc
Confidence 36899999 58999999999999996 78888765111 0011 12222233
Q ss_pred CCh----hhccCCcEEEEecC-------------CHHHHHHHHHHHHhcCCCce-eEEEeecceeE
Q 001331 193 LTK----EQLSDFQAVVFTDI-------------SLDKAIEFDDFCHNHQPAIS-FIKAEVRGLFG 240 (1099)
Q Consensus 193 l~~----~~l~~~dvVV~~~~-------------~~~~~~~ln~~c~~~~~~ip-fI~~~~~G~~G 240 (1099)
++. +.+.++|+||.+.. +......+-+.|++.+ ++ ||..++.+.+|
T Consensus 51 l~~~~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vyg 114 (311)
T 3m2p_A 51 YTLEDLINQLNDVDAVVHLAATRGSQGKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAYS 114 (311)
T ss_dssp CCHHHHHHHTTTCSEEEECCCCCCSSSCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCC
T ss_pred ccHHHHHHhhcCCCEEEEccccCCCCChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhC
Confidence 321 23456777776532 1223356778888888 66 88888877766
No 175
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.30 E-value=1.7 Score=48.50 Aligned_cols=71 Identities=18% Similarity=0.236 Sum_probs=48.9
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh---CCCcEEEEEec
Q 001331 116 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL---NNAVVLSTLTS 191 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL---Np~V~v~~~~~ 191 (1099)
+|.|||+|.+|..++..|+..|. +.++++|.+. .+++.....+... .+.+.+.. .
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~i~~--~ 60 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK-------------------KRAEGDALDLIHGTPFTRRANIYA--G 60 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH-------------------HHHHHHHHHHHHHGGGSCCCEEEE--C
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh-------------------HHHHHHHHHHHhhhhhcCCcEEEe--C
Confidence 79999999999999999999994 5799988532 2333333333322 23445554 2
Q ss_pred CCChhhccCCcEEEEecC
Q 001331 192 KLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~~ 209 (1099)
+.+.+.+.|+||.+..
T Consensus 61 --d~~~~~~aDvViiav~ 76 (319)
T 1a5z_A 61 --DYADLKGSDVVIVAAG 76 (319)
T ss_dssp --CGGGGTTCSEEEECCC
T ss_pred --CHHHhCCCCEEEEccC
Confidence 2345789999999875
No 176
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=89.29 E-value=0.38 Score=52.79 Aligned_cols=75 Identities=16% Similarity=0.206 Sum_probs=50.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC--C-CcEEE
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN--N-AVVLS 187 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN--p-~V~v~ 187 (1099)
.+++++|+|+|+||+|..+++.|...| +|+++|.+. .|++.+.+.+.... . .+.+.
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L~~~G--~V~v~~r~~-------------------~~~~~l~~~~~~~~~~~~~~~~d 183 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTV-------------------EKAEALAKEIAEKLNKKFGEEVK 183 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSH-------------------HHHHHHHHHHHHHHTCCHHHHEE
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHCC--CEEEEECCH-------------------HHHHHHHHHHhhhcccccceeEE
Confidence 367889999999999999999999999 999987432 25555555554321 0 11222
Q ss_pred EEecCCChhhccCCcEEEEecC
Q 001331 188 TLTSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 188 ~~~~~l~~~~l~~~dvVV~~~~ 209 (1099)
... + .+.+.++|+||.+..
T Consensus 184 ~~~--~-~~~~~~~DilVn~ag 202 (287)
T 1nvt_A 184 FSG--L-DVDLDGVDIIINATP 202 (287)
T ss_dssp EEC--T-TCCCTTCCEEEECSC
T ss_pred Eee--H-HHhhCCCCEEEECCC
Confidence 221 2 345667888887764
No 177
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=89.29 E-value=1.2 Score=48.95 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=29.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~------~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL------STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC------eEEEEECC
Confidence 4689999999999999999999997 78888754
No 178
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=89.25 E-value=0.35 Score=53.68 Aligned_cols=111 Identities=21% Similarity=0.254 Sum_probs=67.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC-
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL- 193 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l- 193 (1099)
++|.+||+|-.|..+|+||+.+|. .++++|.+.-....+.. .|-..+....+.. -+.++-+......-
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~-~v~v~dr~~~~~~~l~~--------~Ga~~a~s~~e~~--~~~dvv~~~l~~~~~ 72 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVA--------AGASAARSARDAV--QGADVVISMLPASQH 72 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH--------TTCEECSSHHHHH--TTCSEEEECCSCHHH
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHH--------cCCEEcCCHHHHH--hcCCceeecCCchHH
Confidence 479999999999999999999997 78888864322222111 0111111111111 12344444433221
Q ss_pred Ch----------hhccCCcEEEEe-cCCHHHHHHHHHHHHhcCCCceeEEEeecce
Q 001331 194 TK----------EQLSDFQAVVFT-DISLDKAIEFDDFCHNHQPAISFIKAEVRGL 238 (1099)
Q Consensus 194 ~~----------~~l~~~dvVV~~-~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~ 238 (1099)
.+ ..+..=.+||++ +.+++...++.+.+.++| +-|+.+-+.|-
T Consensus 73 v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G--~~~lDaPVsGg 126 (300)
T 3obb_A 73 VEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERG--LAMLDAPVSGG 126 (300)
T ss_dssp HHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTT--CEEEECCEESC
T ss_pred HHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcC--CEEEecCCCCC
Confidence 00 112223567765 457888899999999999 99999887763
No 179
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=89.24 E-value=1.2 Score=46.92 Aligned_cols=98 Identities=12% Similarity=0.120 Sum_probs=61.3
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 114 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 114 ~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
.++|+|.| .|++|.++++.|+..|--+|++++.+.-....+.. + .+.....+
T Consensus 23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-------------------------~--~~~~~~~D 75 (236)
T 3qvo_A 23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------------------------T--NSQIIMGD 75 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-------------------------T--TEEEEECC
T ss_pred ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-------------------------C--CcEEEEec
Confidence 46899999 68999999999999994478888765422211110 1 23444445
Q ss_pred CCh-----hhccCCcEEEEecCC--HH-HHHHHHHHHHhcCCCc-eeEEEeecceeE
Q 001331 193 LTK-----EQLSDFQAVVFTDIS--LD-KAIEFDDFCHNHQPAI-SFIKAEVRGLFG 240 (1099)
Q Consensus 193 l~~-----~~l~~~dvVV~~~~~--~~-~~~~ln~~c~~~~~~i-pfI~~~~~G~~G 240 (1099)
+++ ..+.+.|+||.+... .. ....+-+.|++.+ + .||..++.+.++
T Consensus 76 l~d~~~~~~~~~~~D~vv~~a~~~~~~~~~~~~~~~~~~~~--~~~iV~iSS~~~~~ 130 (236)
T 3qvo_A 76 VLNHAALKQAMQGQDIVYANLTGEDLDIQANSVIAAMKACD--VKRLIFVLSLGIYD 130 (236)
T ss_dssp TTCHHHHHHHHTTCSEEEEECCSTTHHHHHHHHHHHHHHTT--CCEEEEECCCCC--
T ss_pred CCCHHHHHHHhcCCCEEEEcCCCCchhHHHHHHHHHHHHcC--CCEEEEEecceecC
Confidence 532 246678999876542 21 2335666777777 4 477777766654
No 180
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=89.13 E-value=2.2 Score=46.78 Aligned_cols=107 Identities=12% Similarity=0.059 Sum_probs=63.5
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEE-
Q 001331 112 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL- 189 (1099)
Q Consensus 112 L~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~- 189 (1099)
+.+.+|||.|+ |++|.++++.|...|. +|++++.+. .+.+.+.+.+....+ -.++..
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~-~~~~~~~ 67 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSA-------------------SKLANLQKRWDAKYP-GRFETAV 67 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSH-------------------HHHHHHHHHHHHHST-TTEEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCc-------------------ccHHHHHHHhhccCC-CceEEEE
Confidence 34678999996 9999999999999995 677766421 133333344433332 134444
Q ss_pred ecCCCh-----hhccCCcEEEEecC------CHH--------HHHHHHHHHHh-cCCCceeEEEeecceeE
Q 001331 190 TSKLTK-----EQLSDFQAVVFTDI------SLD--------KAIEFDDFCHN-HQPAISFIKAEVRGLFG 240 (1099)
Q Consensus 190 ~~~l~~-----~~l~~~dvVV~~~~------~~~--------~~~~ln~~c~~-~~~~ipfI~~~~~G~~G 240 (1099)
..++.+ +.+.++|+||.+.. +.. ....+-+.|++ .+ ...||.+++.+.+|
T Consensus 68 ~~D~~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~ 137 (342)
T 1y1p_A 68 VEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSAL 137 (342)
T ss_dssp CSCTTSTTTTTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTC
T ss_pred ecCCcChHHHHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhc
Confidence 344432 34567899997643 111 12345567764 33 14677777765543
No 181
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=89.03 E-value=0.38 Score=54.01 Aligned_cols=36 Identities=17% Similarity=0.422 Sum_probs=31.6
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++|.|||+|.+|..+++.|...|+ +++.+|..
T Consensus 134 ~l~gktvGIiGlG~IG~~vA~~l~~~G~------~V~~~dr~ 169 (324)
T 3evt_A 134 TLTGQQLLIYGTGQIGQSLAAKASALGM------HVIGVNTT 169 (324)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred cccCCeEEEECcCHHHHHHHHHHHhCCC------EEEEECCC
Confidence 3667899999999999999999999998 78888754
No 182
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=88.98 E-value=1.4 Score=48.78 Aligned_cols=36 Identities=22% Similarity=0.293 Sum_probs=30.8
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 111 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 111 kL~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+.+.+|||.|+ |++|..+++.|+..|. +|+++|..
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 456679999996 9999999999999995 78888864
No 183
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.97 E-value=0.7 Score=51.82 Aligned_cols=118 Identities=15% Similarity=0.191 Sum_probs=64.6
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHH--cCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVAL--MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 585 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~--~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~ 585 (1099)
+..++|+|.| +|.||..+++.|+. .|. +++++|...-.. ...+. ....+++.. .. +.
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~------~V~~~~r~~~~~-~~~~~---~~~~~~~~~---------~~-~~ 67 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA------KVVVLDKFRSNT-LFSNN---RPSSLGHFK---------NL-IG 67 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS------EEEEEECCCCC-----------CCCCCCGG---------GG-TT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC------eEEEEECCCccc-ccccc---chhhhhhhh---------hc-cc
Confidence 4567999997 69999999999999 776 888887532100 00000 000111100 00 11
Q ss_pred CeEEEEecccCcccccccchhh-hcCCCEEEEccC---------------chHHHHHHHhhcccccccEEEcCcCcccce
Q 001331 586 LNIEALQNRVGPETENVFDDTF-WENITCVINALD---------------NVNARLYVDQRCLYFQKPLLESGTLGAKCN 649 (1099)
Q Consensus 586 ~~i~~~~~~v~~~~e~~~~~~~-~~~~DvVi~alD---------------n~~ar~~i~~~c~~~~~Pli~sgt~G~~G~ 649 (1099)
..+..+...+.... . + ..+ ..++|+||++.. |+.+-..+-+.|.+.+..+|..++.+.+|.
T Consensus 68 ~~~~~~~~Dl~d~~-~-~-~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~ 144 (362)
T 3sxp_A 68 FKGEVIAADINNPL-D-L-RRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGN 144 (362)
T ss_dssp CCSEEEECCTTCHH-H-H-HHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCS
T ss_pred cCceEEECCCCCHH-H-H-HHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCC
Confidence 23344544444321 1 1 122 567888887653 223334566777777766887777665554
No 184
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=88.96 E-value=1.5 Score=47.56 Aligned_cols=87 Identities=11% Similarity=0.047 Sum_probs=55.1
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
.+|.|||+|.+|+.+++.|+. |. +++++|.+. .|++.+++. .+.+ .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~------~V~~~~~~~-------------------~~~~~~~~~------g~~~--~ 47 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF------PTLVWNRTF-------------------EKALRHQEE------FGSE--A 47 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS------CEEEECSST-------------------HHHHHHHHH------HCCE--E
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC------eEEEEeCCH-------------------HHHHHHHHC------CCcc--c
Confidence 479999999999999999999 97 688876432 122222221 1111 1
Q ss_pred ecccCcccccccchhhhcCCCEEEEccCchH-HHHHHHhhc--ccccccEEEcCc
Q 001331 592 QNRVGPETENVFDDTFWENITCVINALDNVN-ARLYVDQRC--LYFQKPLLESGT 643 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~-ar~~i~~~c--~~~~~Pli~sgt 643 (1099)
. . .+.+.++|+||.|+-+.. .+..+..+. ...+..+++.++
T Consensus 48 ~------~-----~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~l~~~~~vv~~s~ 91 (289)
T 2cvz_A 48 V------P-----LERVAEARVIFTCLPTTREVYEVAEALYPYLREGTYWVDATS 91 (289)
T ss_dssp C------C-----GGGGGGCSEEEECCSSHHHHHHHHHHHTTTCCTTEEEEECSC
T ss_pred C------H-----HHHHhCCCEEEEeCCChHHHHHHHHHHHhhCCCCCEEEECCC
Confidence 0 0 234578999999998775 555554442 234566776554
No 185
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=88.86 E-value=0.79 Score=49.25 Aligned_cols=64 Identities=22% Similarity=0.275 Sum_probs=44.3
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
+.+++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.+.+..+..+
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~ 65 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA------KLSLVDVSS-------------------EGLEASKAAVLETAPDAE 65 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCTTCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhcCCce
Confidence 5677888887 78999999999999997 788876432 233444455555554556
Q ss_pred EEEEecccCc
Q 001331 588 IEALQNRVGP 597 (1099)
Q Consensus 588 i~~~~~~v~~ 597 (1099)
+..+...+..
T Consensus 66 ~~~~~~D~~~ 75 (267)
T 1iy8_A 66 VLTTVADVSD 75 (267)
T ss_dssp EEEEECCTTS
T ss_pred EEEEEccCCC
Confidence 6666666554
No 186
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.81 E-value=2.3 Score=47.32 Aligned_cols=83 Identities=17% Similarity=0.084 Sum_probs=52.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCC-eEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg-~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
-.+|.|||+|.+|..+|+.|...|.. .|+++|.+.- +++ .+.++.-... . ..+
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~-------------------~~~----~a~~~G~~~~--~-~~~ 86 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE-------------------SIS----KAVDLGIIDE--G-TTS 86 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH-------------------HHH----HHHHTTSCSE--E-ESC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH-------------------HHH----HHHHCCCcch--h-cCC
Confidence 36899999999999999999999974 7888885321 222 2222221001 1 112
Q ss_pred CChh-hccCCcEEEEecCCHHHHHHHHHHHHh
Q 001331 193 LTKE-QLSDFQAVVFTDISLDKAIEFDDFCHN 223 (1099)
Q Consensus 193 l~~~-~l~~~dvVV~~~~~~~~~~~ln~~c~~ 223 (1099)
+ ++ .+.+.|+||+|.........+.++...
T Consensus 87 ~-~~~~~~~aDvVilavp~~~~~~vl~~l~~~ 117 (314)
T 3ggo_A 87 I-AKVEDFSPDFVMLSSPVRTFREIAKKLSYI 117 (314)
T ss_dssp T-TGGGGGCCSEEEECSCGGGHHHHHHHHHHH
T ss_pred H-HHHhhccCCEEEEeCCHHHHHHHHHHHhhc
Confidence 2 24 578899999998655444444454443
No 187
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.80 E-value=0.25 Score=50.11 Aligned_cols=90 Identities=12% Similarity=0.100 Sum_probs=55.8
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHc-CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~-Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
+.+.+|+|+|+|.+|..+++.|... |. .++++|.|. .|.+. +.+. ++.
T Consensus 37 ~~~~~v~IiG~G~~G~~~a~~L~~~~g~------~V~vid~~~-------------------~~~~~----~~~~--g~~ 85 (183)
T 3c85_A 37 PGHAQVLILGMGRIGTGAYDELRARYGK------ISLGIEIRE-------------------EAAQQ----HRSE--GRN 85 (183)
T ss_dssp CTTCSEEEECCSHHHHHHHHHHHHHHCS------CEEEEESCH-------------------HHHHH----HHHT--TCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhccCC------eEEEEECCH-------------------HHHHH----HHHC--CCC
Confidence 4467999999999999999999999 97 789988543 11211 2222 222
Q ss_pred EEEEecccCcccccccchhh--hcCCCEEEEccCchHHHHHHHhhcccc
Q 001331 588 IEALQNRVGPETENVFDDTF--WENITCVINALDNVNARLYVDQRCLYF 634 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~--~~~~DvVi~alDn~~ar~~i~~~c~~~ 634 (1099)
+ +...... ...+ .+. .+++|+||.|+.+...-..+-..+...
T Consensus 86 ~--~~gd~~~--~~~l-~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~ 129 (183)
T 3c85_A 86 V--ISGDATD--PDFW-ERILDTGHVKLVLLAMPHHQGNQTALEQLQRR 129 (183)
T ss_dssp E--EECCTTC--HHHH-HTBCSCCCCCEEEECCSSHHHHHHHHHHHHHT
T ss_pred E--EEcCCCC--HHHH-HhccCCCCCCEEEEeCCChHHHHHHHHHHHHH
Confidence 2 2222211 1111 122 468999999999877665555444443
No 188
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.77 E-value=0.53 Score=51.41 Aligned_cols=31 Identities=32% Similarity=0.350 Sum_probs=27.5
Q ss_pred cEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 513 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 513 ~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+|.|||+|.+|+.+++.|+..|. +++++|.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~------~V~~~~~~ 32 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY------PLIIYDVF 32 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC------CEEEECSS
T ss_pred eEEEEeccHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 79999999999999999999987 68887643
No 189
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=88.76 E-value=1.8 Score=48.40 Aligned_cols=112 Identities=13% Similarity=0.206 Sum_probs=63.7
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHH--hCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEE
Q 001331 112 LFASNILVSG-MQGLGAEIAKNLIL--AGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLST 188 (1099)
Q Consensus 112 L~~s~VlIiG-~gglG~EiaKnLvl--aGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~ 188 (1099)
|...+|||.| .|++|..+++.|.. .|. +|+++|...-...-..+ ..+.++... .+. ...+..
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~----~~~~~~~~~---------~~~-~~~~~~ 72 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRSNTLFSNN----RPSSLGHFK---------NLI-GFKGEV 72 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCCC-----------CCCCCCGG---------GGT-TCCSEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCcccccccc----chhhhhhhh---------hcc-ccCceE
Confidence 5578999997 59999999999999 776 78888753320000000 000011100 111 112334
Q ss_pred EecCCCh-----hh-ccCCcEEEEecC-------CHH--------HHHHHHHHHHhcCCCceeEEEeecceeE
Q 001331 189 LTSKLTK-----EQ-LSDFQAVVFTDI-------SLD--------KAIEFDDFCHNHQPAISFIKAEVRGLFG 240 (1099)
Q Consensus 189 ~~~~l~~-----~~-l~~~dvVV~~~~-------~~~--------~~~~ln~~c~~~~~~ipfI~~~~~G~~G 240 (1099)
...++.+ .. ..++|+||-+.. ... ....+-+.|++.+ ++||.+++.+.+|
T Consensus 73 ~~~Dl~d~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~V~~SS~~vyg 143 (362)
T 3sxp_A 73 IAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK--AKVIYASSAGVYG 143 (362)
T ss_dssp EECCTTCHHHHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT--CEEEEEEEGGGGC
T ss_pred EECCCCCHHHHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC--CcEEEeCcHHHhC
Confidence 4444432 12 457788886532 111 2235667888888 7799998877766
No 190
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.72 E-value=2 Score=48.02 Aligned_cols=99 Identities=12% Similarity=0.189 Sum_probs=63.2
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEE
Q 001331 112 LFASNILVSG-MQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 189 (1099)
Q Consensus 112 L~~s~VlIiG-~gglG~EiaKnLvla-GVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~ 189 (1099)
|.+++|||.| .|++|.++++.|+.. |..+|++++.+. .+.+.+.+.+ . ...+...
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~-------------------~~~~~~~~~~---~-~~~v~~~ 75 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE-------------------LKQSEMAMEF---N-DPRMRFF 75 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH-------------------HHHHHHHHHH---C-CTTEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh-------------------hhHHHHHHHh---c-CCCEEEE
Confidence 4568999999 599999999999999 988999987532 1222232222 1 2345556
Q ss_pred ecCCCh-----hhccCCcEEEEecCC--H-------HH--------HHHHHHHHHhcCCCc-eeEEEee
Q 001331 190 TSKLTK-----EQLSDFQAVVFTDIS--L-------DK--------AIEFDDFCHNHQPAI-SFIKAEV 235 (1099)
Q Consensus 190 ~~~l~~-----~~l~~~dvVV~~~~~--~-------~~--------~~~ln~~c~~~~~~i-pfI~~~~ 235 (1099)
..++.+ ..+.+.|+||.+... . .. ...+-+.|++.+ + .||..++
T Consensus 76 ~~Dl~d~~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS 142 (344)
T 2gn4_A 76 IGDVRDLERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALST 142 (344)
T ss_dssp ECCTTCHHHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred ECCCCCHHHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecC
Confidence 666543 356788999876531 1 11 134566777776 4 4665554
No 191
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=88.70 E-value=1.2 Score=48.00 Aligned_cols=32 Identities=25% Similarity=0.119 Sum_probs=29.4
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
+|.|||+|.+|+.++..|..+|. .++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-CEEEEEcCc
Confidence 79999999999999999999996 899998754
No 192
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=88.69 E-value=1.1 Score=49.84 Aligned_cols=102 Identities=11% Similarity=0.099 Sum_probs=61.8
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
+..++|+|.|+ |.+|..+++.|+..|. ++++++.+. .-...|...+. .+. .+ .
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~------~V~~l~R~~---------------~~~~~~~~~~~-~l~--~~--~ 61 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHR------PTYILARPG---------------PRSPSKAKIFK-ALE--DK--G 61 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTC------CEEEEECSS---------------CCCHHHHHHHH-HHH--HT--T
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCC------CEEEEECCC---------------CCChhHHHHHH-HHH--hC--C
Confidence 34579999997 9999999999999996 677766432 00112322221 121 12 3
Q ss_pred EEEEecccCcccccccchhhhc--CCCEEEEccC--chHHHHHHHhhccccc-ccEE
Q 001331 588 IEALQNRVGPETENVFDDTFWE--NITCVINALD--NVNARLYVDQRCLYFQ-KPLL 639 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~--~~DvVi~alD--n~~ar~~i~~~c~~~~-~Pli 639 (1099)
++.+...+.+. +.+ ...++ ++|+||++.. |+..-..+-+.|...+ ++.+
T Consensus 62 v~~~~~Dl~d~-~~l--~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 62 AIIVYGLINEQ-EAM--EKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRF 115 (346)
T ss_dssp CEEEECCTTCH-HHH--HHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHCCCSEE
T ss_pred cEEEEeecCCH-HHH--HHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcCCceEE
Confidence 44555555432 222 34567 9999999886 5555566777777766 5443
No 193
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=88.63 E-value=0.68 Score=51.95 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=50.1
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC--eE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL--NI 588 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~--~i 588 (1099)
..||.|||+|.+|+.++..|+..|+. +.++++|.+ ..|++..+.-+....|.. .+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~----~~l~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~v 61 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGIT----DELVVIDVN-------------------KEKAMGDVMDLNHGKAFAPQPV 61 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHHTGGGSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----ceEEEEecc-------------------hHHHHHHHHHHHhccccccCCe
Confidence 45899999999999999999999983 588988743 345555555555544422 12
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEcc
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINAL 618 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~al 618 (1099)
..+... .+-+++.|+||.+.
T Consensus 62 ~i~~~~----------~~a~~~aDvVvi~a 81 (326)
T 3pqe_A 62 KTSYGT----------YEDCKDADIVCICA 81 (326)
T ss_dssp EEEEEC----------GGGGTTCSEEEECC
T ss_pred EEEeCc----------HHHhCCCCEEEEec
Confidence 222110 12368899999885
No 194
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=88.59 E-value=0.52 Score=55.31 Aligned_cols=33 Identities=24% Similarity=0.355 Sum_probs=29.3
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.++|+|+|+|++|..+++.|+..|. +++++|.+
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~------~V~v~~R~ 35 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGI------KVTVACRT 35 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTC------EEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcC------EEEEEECC
Confidence 5689999999999999999999886 68888865
No 195
>3onh_A Ubiquitin-activating enzyme E1-like; ligase, SUMO conjugation, UBC9; 1.60A {Saccharomyces cerevisiae} PDB: 3ong_A
Probab=88.55 E-value=0.53 Score=45.06 Aligned_cols=45 Identities=16% Similarity=0.330 Sum_probs=35.1
Q ss_pred CCcHHHHHHHHHHc-CCc-eeeee--cCCceeecCCCcchhccccCcHHHHH
Q 001331 1013 NPTLRELIQWLKDK-GLN-AYSIS--CGSCLLFNSMFPRHKERMDKKVVDLA 1060 (1099)
Q Consensus 1013 ~~TL~~li~~~~~~-~l~-~~~i~--~g~~~LY~~~~~~~~~~l~~~l~~l~ 1060 (1099)
.+||++|++.++++ |.. -.+|+ .+.++||+.. ..++|.|+|++|-
T Consensus 19 ~~TL~dLV~~l~~~~gy~~eiSV~~~~~~rLLyD~D---fDDnl~k~L~dLg 67 (127)
T 3onh_A 19 KMKLSDFVVLIREKYSYPQDISLLDASNQRLLFDYD---FEDLNDRTLSEIN 67 (127)
T ss_dssp HCBHHHHHHHHHHHHTCCSSEEEEETTTTEEEEETT---BCTTTTSBTTTTT
T ss_pred ccCHHHHHHHHHHhcCCCCcEEEEecCCCCeEeCCC---ccccccCcHHHcC
Confidence 58999999999888 653 34454 3578999954 4589999999994
No 196
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.54 E-value=0.6 Score=50.98 Aligned_cols=32 Identities=19% Similarity=0.339 Sum_probs=28.6
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+|.|||+|.+|+.++++|+..|. +++++|.+
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~------~V~~~dr~ 33 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGF------DVTVWNRN 33 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTC------CEEEECSS
T ss_pred CeEEEEccCHHHHHHHHHHHHCCC------eEEEEcCC
Confidence 479999999999999999999997 78888754
No 197
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=88.53 E-value=1.4 Score=49.18 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=50.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHH----HhCCCcEEEEEe
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQ----ELNNAVVLSTLT 190 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~----eLNp~V~v~~~~ 190 (1099)
.+|.|+|+|.+|..++..|+..|...|+|+|-+. .|++.....|. .+....++....
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~-------------------~~l~~~~~~l~~~~~~~~~~~~i~~t~ 65 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK-------------------NMPHGKALDTSHTNVMAYSNCKVSGSN 65 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS-------------------SHHHHHHHHHHTHHHHHTCCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH-------------------HHHHHHHHHHHhhhhhcCCCcEEEECC
Confidence 5899999999999999999999985599998532 13333223332 234455666543
Q ss_pred cCCChhhccCCcEEEEec
Q 001331 191 SKLTKEQLSDFQAVVFTD 208 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~ 208 (1099)
+ + +-+.+.|+||.+.
T Consensus 66 d-~--~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 66 T-Y--DDLAGADVVIVTA 80 (322)
T ss_dssp C-G--GGGTTCSEEEECC
T ss_pred C-H--HHhCCCCEEEEeC
Confidence 2 2 4578999999985
No 198
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=88.53 E-value=0.77 Score=51.53 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=30.9
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
...||.|||+|.+|..++..|+..|. ..++++|.|
T Consensus 13 ~~~kI~ViGaG~vG~~iA~~la~~g~-----~~V~L~Di~ 47 (328)
T 2hjr_A 13 MRKKISIIGAGQIGSTIALLLGQKDL-----GDVYMFDII 47 (328)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 44699999999999999999999998 569999865
No 199
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=88.52 E-value=0.89 Score=48.32 Aligned_cols=84 Identities=20% Similarity=0.295 Sum_probs=52.1
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
+.+++|+|.| .||||.++++.|+..|. ..++++|.+. + + ...+.+.+..+..+
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~-----~~v~~~~r~~---------------~----~--~~~~~l~~~~~~~~ 56 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNL-----KNFVILDRVE---------------N----P--TALAELKAINPKVN 56 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCC-----SEEEEEESSC---------------C----H--HHHHHHHHHCTTSE
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-----cEEEEEecCc---------------h----H--HHHHHHHHhCCCce
Confidence 4567899998 78999999999999998 4488876432 0 0 11233444555567
Q ss_pred EEEEecccCcc-c--ccccc--hhhhcCCCEEEEcc
Q 001331 588 IEALQNRVGPE-T--ENVFD--DTFWENITCVINAL 618 (1099)
Q Consensus 588 i~~~~~~v~~~-~--e~~~~--~~~~~~~DvVi~al 618 (1099)
+..+...+... . +..+. .+-+.+.|+||++.
T Consensus 57 ~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~A 92 (254)
T 1sby_A 57 ITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGA 92 (254)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECC
Confidence 77777766643 1 11110 01124778888774
No 200
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=88.51 E-value=0.39 Score=51.67 Aligned_cols=34 Identities=24% Similarity=0.364 Sum_probs=28.6
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 511 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
.++|+|.| +|+||.++++.|+..|. +++++|.+.
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~------~V~~~~r~~ 37 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE------ILRLADLSP 37 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE------EEEEEESSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC------EEEEEecCC
Confidence 45789998 79999999999999986 788887553
No 201
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=88.50 E-value=1.3 Score=49.62 Aligned_cols=80 Identities=20% Similarity=0.284 Sum_probs=52.9
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHc-CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~-Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
+.+++|+|.| .|++|.++++.|+.. |. .+++++|.+. .|...+++.+ . ..
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~-----~~V~~~~r~~-------------------~~~~~~~~~~---~-~~ 70 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNA-----KKIIVYSRDE-------------------LKQSEMAMEF---N-DP 70 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCC-----SEEEEEESCH-------------------HHHHHHHHHH---C-CT
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCC-----CEEEEEECCh-------------------hhHHHHHHHh---c-CC
Confidence 4567899999 599999999999999 87 6888886442 1222233222 1 23
Q ss_pred eEEEEecccCcccccccchhhhcCCCEEEEccC
Q 001331 587 NIEALQNRVGPETENVFDDTFWENITCVINALD 619 (1099)
Q Consensus 587 ~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD 619 (1099)
.+..+...+.... .+ ...++++|+||++.-
T Consensus 71 ~v~~~~~Dl~d~~-~l--~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 71 RMRFFIGDVRDLE-RL--NYALEGVDICIHAAA 100 (344)
T ss_dssp TEEEEECCTTCHH-HH--HHHTTTCSEEEECCC
T ss_pred CEEEEECCCCCHH-HH--HHHHhcCCEEEECCC
Confidence 5666666665422 12 345678999998874
No 202
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=88.50 E-value=1.7 Score=48.50 Aligned_cols=72 Identities=17% Similarity=0.235 Sum_probs=52.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC---CCcEEEEEe
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLT 190 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN---p~V~v~~~~ 190 (1099)
.+|.|+|+|++|..++-.|+..|. .+|.|+|-+ ..|++..+..|.... +.+++..
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~v~~-- 64 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV-------------------KDRTKGDALDLEDAQAFTAPKKIYS-- 64 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS-------------------HHHHHHHHHHHHGGGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC-------------------chHHHHHHHHHHHHHHhcCCeEEEE--
Confidence 689999999999999999999884 578888841 235665555555443 4555654
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
. +.+-+.+.|+||++..
T Consensus 65 ~--~~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 65 G--EYSDCKDADLVVITAG 81 (318)
T ss_dssp C--CGGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 3456889999999864
No 203
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=88.43 E-value=0.28 Score=50.47 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=29.8
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+..|+|||+|..|+.+|..|++.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~------~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH------QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC------CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEECC
Confidence 3569999999999999999999999 89999853
No 204
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.36 E-value=0.91 Score=50.92 Aligned_cols=75 Identities=21% Similarity=0.270 Sum_probs=51.7
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCC---CC
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP---RL 586 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np---~~ 586 (1099)
...||.|+|+|.+|+.++..|+..|+. ++|+++|.+ ..|++..+.-+....| .+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~-------------------~~k~~g~a~DL~~~~~~~~~~ 64 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDIF-------------------KDKTKGDAIDLEDALPFTSPK 64 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEeCC-------------------hHHHHHHHhhHhhhhhhcCCc
Confidence 356899999999999999999999984 589998742 2355555555655443 23
Q ss_pred eEEEEecccCcccccccchhhhcCCCEEEEccC
Q 001331 587 NIEALQNRVGPETENVFDDTFWENITCVINALD 619 (1099)
Q Consensus 587 ~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD 619 (1099)
++. .. . .+-+++.|+||.+..
T Consensus 65 ~i~--~~-----~-----~~a~~~aDiVvi~ag 85 (326)
T 3vku_A 65 KIY--SA-----E-----YSDAKDADLVVITAG 85 (326)
T ss_dssp EEE--EC-----C-----GGGGTTCSEEEECCC
T ss_pred EEE--EC-----c-----HHHhcCCCEEEECCC
Confidence 332 11 1 133689999998853
No 205
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=88.34 E-value=0.8 Score=50.61 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=27.8
Q ss_pred CcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+|+|.| .|.||..+++.|+..|. +++++|.+
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 46 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH------DLVLIHRP 46 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC------EEEEEecC
Confidence 4799999 59999999999999986 78888754
No 206
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=88.33 E-value=0.9 Score=50.76 Aligned_cols=88 Identities=15% Similarity=0.135 Sum_probs=61.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
..+|+|+|+|.+|..+++.|...|. ++++|.+.- +++ +++ ..+ .+...+.
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~~~g~--v~vid~~~~-------------------~~~-----~~~--~~~--~~i~gd~ 164 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELRGSEV--FVLAEDENV-------------------RKK-----VLR--SGA--NFVHGDP 164 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGGGSCE--EEEESCGGG-------------------HHH-----HHH--TTC--EEEESCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCc--EEEEeCChh-------------------hhh-----HHh--CCc--EEEEeCC
Confidence 5689999999999999999999987 888886431 322 222 223 3344443
Q ss_pred C-hh-----hccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeE
Q 001331 194 T-KE-----QLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 231 (1099)
Q Consensus 194 ~-~~-----~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI 231 (1099)
+ ++ -+.++|.||++..+.+....+...+++.+++++.|
T Consensus 165 ~~~~~L~~a~i~~a~~vi~~~~~d~~n~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 165 TRVSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDESVRII 208 (336)
T ss_dssp TSHHHHHHTCSTTEEEEEECCSSHHHHHHHHHHHHTTCTTSEEE
T ss_pred CCHHHHHhcChhhccEEEEcCCccHHHHHHHHHHHHHCCCCeEE
Confidence 2 22 36678999998887777778888999988543444
No 207
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.31 E-value=1 Score=49.65 Aligned_cols=32 Identities=34% Similarity=0.567 Sum_probs=28.9
Q ss_pred CcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+|.||| +|.+|+.+++.|+..|. +++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~------~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY------PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC------CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC------eEEEEECC
Confidence 5899999 99999999999999997 78888855
No 208
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=88.07 E-value=1 Score=53.01 Aligned_cols=124 Identities=13% Similarity=0.152 Sum_probs=66.5
Q ss_pred hcCcEEEEc-CCcchHHHHHHHHHc---CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCC
Q 001331 510 EDAKVFIVG-SGALGCEFLKNVALM---GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 585 (1099)
Q Consensus 510 ~~~~v~vvG-~GglG~evlk~La~~---Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~ 585 (1099)
..++|+|.| .|.||+++++.|+.. |. ++++++...-....+.| +-. ........... .+.... .
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~------~V~~l~R~~~~~~~~~~--l~~--~~~~~~~~~~~-~~~~~~-~ 139 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDG------RLICLVRAESDEDARRR--LEK--TFDSGDPELLR-HFKELA-A 139 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTC------EEEEEECSSSHHHHHHH--HHG--GGCSSCHHHHH-HHHHHH-T
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCC------EEEEEECCCCcHHHHHH--HHH--HHHhcchhhhh-hhhhhc-c
Confidence 467899999 589999999999998 54 78887643211111111 000 00000000111 111111 1
Q ss_pred CeEEEEecccCccc----ccccchhhhcCCCEEEEccC-------------chHHHHHHHhhcccccc-cEEEcCcCcc
Q 001331 586 LNIEALQNRVGPET----ENVFDDTFWENITCVINALD-------------NVNARLYVDQRCLYFQK-PLLESGTLGA 646 (1099)
Q Consensus 586 ~~i~~~~~~v~~~~----e~~~~~~~~~~~DvVi~alD-------------n~~ar~~i~~~c~~~~~-Pli~sgt~G~ 646 (1099)
-+++.+...+.... ...+ ...++++|+||++.- |+..-..+-+.|...++ .+|..++.+.
T Consensus 140 ~~v~~v~~Dl~~~~~gld~~~~-~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v 217 (478)
T 4dqv_A 140 DRLEVVAGDKSEPDLGLDQPMW-RRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADV 217 (478)
T ss_dssp TTEEEEECCTTSGGGGCCHHHH-HHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGG
T ss_pred CceEEEEeECCCcccCCCHHHH-HHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhh
Confidence 35666766665321 0011 345578999998863 34444567777877764 6776665543
No 209
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=88.04 E-value=0.84 Score=51.57 Aligned_cols=77 Identities=17% Similarity=0.207 Sum_probs=51.8
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh-CCCcEEEE
Q 001331 112 LFASNILVSGM-QGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLST 188 (1099)
Q Consensus 112 L~~s~VlIiG~-gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL-Np~V~v~~ 188 (1099)
|...+|.|+|+ |.+|+.+|..|++.|. .+|+|+|-+ ..|++..+.-|+.. .|...+..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~-------------------~~k~~g~a~DL~~~~~~~~~i~~ 66 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF-------------------AVGLEGVAEEIRHCGFEGLNLTF 66 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC-------------------HHHHHHHHHHHHHHCCTTCCCEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC-------------------chhHHHHHHhhhhCcCCCCceEE
Confidence 45679999997 9999999999999997 589999842 23555544444443 23333332
Q ss_pred EecCCChhhccCCcEEEEecC
Q 001331 189 LTSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 189 ~~~~l~~~~l~~~dvVV~~~~ 209 (1099)
. .+. .+-+.+.|+||.|..
T Consensus 67 t-~d~-~~al~dADvVvitaG 85 (343)
T 3fi9_A 67 T-SDI-KEALTDAKYIVSSGG 85 (343)
T ss_dssp E-SCH-HHHHTTEEEEEECCC
T ss_pred c-CCH-HHHhCCCCEEEEccC
Confidence 2 111 245789999998853
No 210
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=87.99 E-value=0.44 Score=51.15 Aligned_cols=63 Identities=14% Similarity=0.268 Sum_probs=43.8
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
.+.+++|+|.| .||||.++++.|+..|. +++++|.+ ..+.+.+.+.+....+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r~-------------------~~~~~~~~~~~~~~~~-- 78 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGA------RVVLTARD-------------------VEKLRAVEREIVAAGG-- 78 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEECC-------------------HHHHHHHHHHHHHhCC--
Confidence 36678899998 68999999999999998 78888743 2344445555555443
Q ss_pred eEEEEecccCc
Q 001331 587 NIEALQNRVGP 597 (1099)
Q Consensus 587 ~i~~~~~~v~~ 597 (1099)
++..+...+..
T Consensus 79 ~~~~~~~D~~~ 89 (262)
T 3rkr_A 79 EAESHACDLSH 89 (262)
T ss_dssp EEEEEECCTTC
T ss_pred ceeEEEecCCC
Confidence 55666655554
No 211
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.92 E-value=0.73 Score=51.23 Aligned_cols=35 Identities=20% Similarity=0.459 Sum_probs=29.7
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++|+|.| .||||.++++.|+..|. +++++|.+
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~------~Vv~~~r~ 41 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC------KVAIADIR 41 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC------EEEEEECC
Confidence 4567899998 58999999999999998 78888754
No 212
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=87.88 E-value=0.83 Score=51.13 Aligned_cols=35 Identities=20% Similarity=0.387 Sum_probs=31.1
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
...||.|||+|.+|+.++..|+..|+ +.++++|-+
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~~~~~-----~~v~l~Di~ 38 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLALIKQL-----GDVVLFDIA 38 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCC
Confidence 35799999999999999999999998 689999854
No 213
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=87.81 E-value=1.2 Score=48.46 Aligned_cols=37 Identities=27% Similarity=0.439 Sum_probs=29.6
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 111 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 111 kL~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
.+...+|||.|+ |.+|..+++.|...|. +|++++...
T Consensus 4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~ 41 (321)
T 3vps_A 4 NTLKHRILITGGAGFIGGHLARALVASGE-EVTVLDDLR 41 (321)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC-CEEEECCCS
T ss_pred ccCCCeEEEECCCChHHHHHHHHHHHCCC-EEEEEecCC
Confidence 356789999997 8899999999999996 688877644
No 214
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=87.81 E-value=0.64 Score=52.84 Aligned_cols=37 Identities=16% Similarity=0.391 Sum_probs=30.6
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
-+...+|.|||+|.+|..++++|+..|. .++++|.+.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~------~V~v~dr~~ 55 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGH------ECVVYDLNV 55 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSCH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCC------EEEEEeCCH
Confidence 3556899999999999999999999997 788888653
No 215
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.79 E-value=1.9 Score=46.52 Aligned_cols=30 Identities=27% Similarity=0.249 Sum_probs=27.4
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
+|.|||+|.+|..+++.|...|. +|+++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~ 31 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSR 31 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEEC
Confidence 79999999999999999999997 7888874
No 216
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.68 E-value=3 Score=45.05 Aligned_cols=81 Identities=16% Similarity=0.103 Sum_probs=50.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCC-eEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVK-SVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg-~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
.+|.|||+|.+|..+++.|...|.. +|+++|.+. .+++. +.+..-... . ..++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~-------------------~~~~~----~~~~g~~~~--~-~~~~ 55 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP-------------------ESISK----AVDLGIIDE--G-TTSI 55 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH-------------------HHHHH----HHHTTSCSE--E-ESCG
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH-------------------HHHHH----HHHCCCccc--c-cCCH
Confidence 4799999999999999999999963 688887532 12221 222221101 1 1122
Q ss_pred Chhhcc-CCcEEEEecCCHHHHHHHHHHHH
Q 001331 194 TKEQLS-DFQAVVFTDISLDKAIEFDDFCH 222 (1099)
Q Consensus 194 ~~~~l~-~~dvVV~~~~~~~~~~~ln~~c~ 222 (1099)
++.+. +.|+||+|..+......+.++..
T Consensus 56 -~~~~~~~aDvVilavp~~~~~~v~~~l~~ 84 (281)
T 2g5c_A 56 -AKVEDFSPDFVMLSSPVRTFREIAKKLSY 84 (281)
T ss_dssp -GGGGGTCCSEEEECSCHHHHHHHHHHHHH
T ss_pred -HHHhcCCCCEEEEcCCHHHHHHHHHHHHh
Confidence 24567 89999999876555544555443
No 217
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=87.68 E-value=0.57 Score=50.00 Aligned_cols=82 Identities=11% Similarity=0.172 Sum_probs=49.6
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
.||.|||+|.+|+.+++.|+..|.. +..+++++|.+. .|++.+++.. . +. .
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~--~~~~V~~~~r~~-------------------~~~~~~~~~~---g--~~--~- 53 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIV--SSNQIICSDLNT-------------------ANLKNASEKY---G--LT--T- 53 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSS--CGGGEEEECSCH-------------------HHHHHHHHHH---C--CE--E-
T ss_pred CeEEEECccHHHHHHHHHHHhCCCC--CCCeEEEEeCCH-------------------HHHHHHHHHh---C--CE--E-
Confidence 5899999999999999999999851 113677776431 2333333222 1 21 1
Q ss_pred ecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhc
Q 001331 592 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRC 631 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c 631 (1099)
..+. .+..++.|+||-|+.....+..+..+.
T Consensus 54 ----~~~~-----~e~~~~aDvVilav~~~~~~~v~~~l~ 84 (247)
T 3gt0_A 54 ----TTDN-----NEVAKNADILILSIKPDLYASIINEIK 84 (247)
T ss_dssp ----CSCH-----HHHHHHCSEEEECSCTTTHHHHC---C
T ss_pred ----eCCh-----HHHHHhCCEEEEEeCHHHHHHHHHHHH
Confidence 1111 244678999999996555555554443
No 218
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.66 E-value=1.4 Score=47.50 Aligned_cols=34 Identities=32% Similarity=0.347 Sum_probs=31.1
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+++ +|+|+|+|++|..+++.|...|+ +++++|.+
T Consensus 115 l~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~ 148 (263)
T 2d5c_A 115 LKG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRT 148 (263)
T ss_dssp CCS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECC
Confidence 567 99999999999999999999998 89999854
No 219
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=87.63 E-value=0.47 Score=54.26 Aligned_cols=37 Identities=30% Similarity=0.428 Sum_probs=35.2
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+|+..+|+|+|+|..|..+|+.|+.+|+++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 5788999999999999999999999999999999976
No 220
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=87.62 E-value=1.1 Score=47.88 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=29.2
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGA------RLLLFSRN 40 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 4567888888 68999999999999997 78887743
No 221
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=87.61 E-value=2.4 Score=47.07 Aligned_cols=109 Identities=11% Similarity=0.094 Sum_probs=66.1
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh-CCCcEEEEE
Q 001331 112 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTL 189 (1099)
Q Consensus 112 L~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL-Np~V~v~~~ 189 (1099)
+...+|||.|+ |++|..+++.|...|. +|+++|...-. ...+.+.+.+.+... .+ .+...
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~--~~~~~ 86 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATG---------------HQRNLDEVRSLVSEKQWS--NFKFI 86 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSC---------------CHHHHHHHHHHSCHHHHT--TEEEE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCcc---------------chhhHHHHhhhcccccCC--ceEEE
Confidence 56689999997 9999999999999995 78887753210 011222222221111 13 34455
Q ss_pred ecCCCh-----hhccCCcEEEEecCC--H-------H--------HHHHHHHHHHhcCCCc-eeEEEeecceeE
Q 001331 190 TSKLTK-----EQLSDFQAVVFTDIS--L-------D--------KAIEFDDFCHNHQPAI-SFIKAEVRGLFG 240 (1099)
Q Consensus 190 ~~~l~~-----~~l~~~dvVV~~~~~--~-------~--------~~~~ln~~c~~~~~~i-pfI~~~~~G~~G 240 (1099)
..++.+ +.+.++|+||.+... . . ....+-+.|++.+ + .||.+++.+.+|
T Consensus 87 ~~Dl~d~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~ 158 (352)
T 1sb8_A 87 QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTYG 158 (352)
T ss_dssp ECCTTSHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGT
T ss_pred ECCCCCHHHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEeccHHhcC
Confidence 555542 356789999976541 1 1 1134557788777 5 588888776654
No 222
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=87.58 E-value=1 Score=48.95 Aligned_cols=35 Identities=29% Similarity=0.520 Sum_probs=29.8
Q ss_pred HhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++|+|.|+ ||||.++++.|+..|. +++++|.+
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~------~V~~~~r~ 61 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGA------HVVVTARS 61 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 56788999985 8999999999999997 78887643
No 223
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=87.56 E-value=1 Score=52.72 Aligned_cols=93 Identities=20% Similarity=0.251 Sum_probs=61.5
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
+.+++|+|+|+|+.|..+|+.|...|. +|++.|..... .+ ...+.|++. .+.+. .+
T Consensus 7 ~~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~----------------~~---~~~~~L~~~--gi~~~--~g 62 (451)
T 3lk7_A 7 FENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFD----------------EN---PTAQSLLEE--GIKVV--CG 62 (451)
T ss_dssp TTTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGG----------------GC---HHHHHHHHT--TCEEE--ES
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCccc----------------CC---hHHHHHHhC--CCEEE--EC
Confidence 567899999999999999999999996 89999864420 00 123456555 34444 33
Q ss_pred CCChhhccC-CcEEEEecC-CHHHHHHHHHHHHhcCCCceeEE
Q 001331 192 KLTKEQLSD-FQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIK 232 (1099)
Q Consensus 192 ~l~~~~l~~-~dvVV~~~~-~~~~~~~ln~~c~~~~~~ipfI~ 232 (1099)
.-.++.+.+ +|+||.+.. +... -.-..+++.+ +|++.
T Consensus 63 ~~~~~~~~~~~d~vv~spgi~~~~--p~~~~a~~~g--i~v~~ 101 (451)
T 3lk7_A 63 SHPLELLDEDFCYMIKNPGIPYNN--PMVKKALEKQ--IPVLT 101 (451)
T ss_dssp CCCGGGGGSCEEEEEECTTSCTTS--HHHHHHHHTT--CCEEC
T ss_pred CChHHhhcCCCCEEEECCcCCCCC--hhHHHHHHCC--CcEEe
Confidence 333445666 999998754 2221 1234568888 88763
No 224
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=87.56 E-value=0.69 Score=50.23 Aligned_cols=36 Identities=19% Similarity=0.331 Sum_probs=27.6
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGI------AVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 35677888888 68999999999999998 78887743
No 225
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=87.53 E-value=0.8 Score=49.86 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=27.3
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEec
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
.+|.|||+|.+|+.+++.|+..|. +++++|
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~------~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGH------QLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTC------EEEECC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCC------EEEEEc
Confidence 489999999999999999999987 788887
No 226
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=87.49 E-value=3.2 Score=43.30 Aligned_cols=36 Identities=19% Similarity=0.315 Sum_probs=31.2
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCC-eEEEEeCC
Q 001331 112 LFASNILVSG-MQGLGAEIAKNLILAGVK-SVTLHDEG 147 (1099)
Q Consensus 112 L~~s~VlIiG-~gglG~EiaKnLvlaGVg-~itlvD~d 147 (1099)
|...+|+|.| .|++|.++++.|+..|.. +|++++.+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcC
Confidence 6678999999 699999999999999963 78888764
No 227
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=87.48 E-value=1.1 Score=50.64 Aligned_cols=77 Identities=10% Similarity=0.111 Sum_probs=54.5
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHH-hCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 112 LFASNILVSGMQGLGAEIAKNLIL-AGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvl-aGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
....+|+|||+|+.|..++.+|.. .++.+|+++|.+ ..|++..++.+.+. +.+.+....
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~-------------------~~~a~~la~~~~~~-~g~~~~~~~ 186 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTD-------------------PLATAKLIANLKEY-SGLTIRRAS 186 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHTTC-TTCEEEECS
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCC-------------------HHHHHHHHHHHHhc-cCceEEEeC
Confidence 356799999999999999999864 478999998742 23677776666442 344444332
Q ss_pred cCCChhhccCCcEEEEecCC
Q 001331 191 SKLTKEQLSDFQAVVFTDIS 210 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~~ 210 (1099)
. .++.+.+.|+||.|+.+
T Consensus 187 -~-~~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 187 -S-VAEAVKGVDIITTVTAD 204 (350)
T ss_dssp -S-HHHHHTTCSEEEECCCC
T ss_pred -C-HHHHHhcCCEEEEeccC
Confidence 1 23567789999998865
No 228
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=87.47 E-value=0.84 Score=50.34 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=28.7
Q ss_pred hcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 510 EDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 510 ~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+++|+|.|+ |+||..+++.|+..|. +++++|.+
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~------~V~~~~r~ 36 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGY------EVYGADRR 36 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEECC
Confidence 4678999996 9999999999999997 78887743
No 229
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=87.45 E-value=1 Score=49.21 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=30.9
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 112 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 112 L~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
+.+++|+|.| .||+|..+++.|...|.. |+++|.
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~-V~i~~R 151 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAE-VVLCGR 151 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCE-EEEEEC
Confidence 5778999999 999999999999999985 999874
No 230
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=87.40 E-value=0.9 Score=47.93 Aligned_cols=36 Identities=14% Similarity=0.314 Sum_probs=30.3
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA------SVVLLGRT 47 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEecC
Confidence 35677889988 58999999999999998 78888754
No 231
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=87.36 E-value=1.2 Score=48.35 Aligned_cols=37 Identities=14% Similarity=0.330 Sum_probs=30.9
Q ss_pred HHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 507 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 507 ~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 44 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGA------SVMIVGRN 44 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 356778899998 78999999999999998 78888754
No 232
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.34 E-value=2.3 Score=47.32 Aligned_cols=72 Identities=17% Similarity=0.168 Sum_probs=50.4
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh----CCCcEEEEEe
Q 001331 116 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL----NNAVVLSTLT 190 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL----Np~V~v~~~~ 190 (1099)
+|.|+|+|.+|..+|..|+..|+ ..++|+|-+. .|++..+.-|+.. ...+++...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~-------------------~k~~g~a~DL~~~~~~~~~~~~v~~~- 61 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD-------------------GMPQGKALDMRESSPIHGFDTRVTGT- 61 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST-------------------THHHHHHHHHHHHHHHHTCCCEEEEE-
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch-------------------HHHHHHHHHHhccccccCCCcEEEEC-
Confidence 79999999999999999999997 5899998532 2344333344432 234566543
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
. +.+-+.+.|+||++..
T Consensus 62 ~--~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 62 N--DYGPTEDSDVCIITAG 78 (314)
T ss_dssp S--SSGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 1 2456789999998864
No 233
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=87.27 E-value=0.86 Score=48.77 Aligned_cols=34 Identities=26% Similarity=0.434 Sum_probs=29.2
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
|.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 44 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA------SVVVTDL 44 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC------EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 5677888887 68999999999999998 7888874
No 234
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=87.25 E-value=1.8 Score=47.23 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=28.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
.+|+|||+|.+|+.++..|..+|. .++++|.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r 34 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQ 34 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECS
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEEC
Confidence 489999999999999999999996 7888875
No 235
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=87.24 E-value=0.74 Score=50.92 Aligned_cols=33 Identities=18% Similarity=0.410 Sum_probs=28.2
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+++|+|.| .|+||..+++.|+..|. +++++|.+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~------~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY------DVVIADNL 38 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECCC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC------cEEEEecC
Confidence 46899998 69999999999999997 78887643
No 236
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.23 E-value=0.49 Score=52.03 Aligned_cols=36 Identities=14% Similarity=0.084 Sum_probs=33.4
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+.+++|+|+|+||.|..++..|...|+++|+|++.+
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt 155 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRN 155 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESC
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 578899999999999999999999999999999753
No 237
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=87.21 E-value=1 Score=47.64 Aligned_cols=78 Identities=18% Similarity=0.239 Sum_probs=52.8
Q ss_pred cEEEEcCCcchHHHHHHHHHcCCCCCCCccE-EEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 513 KVFIVGSGALGCEFLKNVALMGVSCGNQGKL-TITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 513 ~v~vvG~GglG~evlk~La~~Gv~~~~~g~i-~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
||.|||+|.+|..++++|...|+ .+ .+.|.+. ...+ .+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~------~lv~v~d~~~----~~~~-------------------------------~~ 40 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGF------EIAAILDVRG----EHEK-------------------------------MV 40 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------EEEEEECSSC----CCTT-------------------------------EE
T ss_pred EEEEECCCHHHHHHHHHHhcCCC------EEEEEEecCc----chhh-------------------------------hc
Confidence 79999999999999999998777 44 6777552 1111 11
Q ss_pred ecccCcccccccchhhh-cCCCEEEEccCchHHHHHHHhhcccccccEEEcC
Q 001331 592 QNRVGPETENVFDDTFW-ENITCVINALDNVNARLYVDQRCLYFQKPLLESG 642 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~-~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sg 642 (1099)
.+. ++++ .+.|+|+.|+-+.....++ ..|.+.+++++...
T Consensus 41 -----~~~-----~~l~~~~~DvVv~~~~~~~~~~~~-~~~l~~G~~vv~~~ 81 (236)
T 2dc1_A 41 -----RGI-----DEFLQREMDVAVEAASQQAVKDYA-EKILKAGIDLIVLS 81 (236)
T ss_dssp -----SSH-----HHHTTSCCSEEEECSCHHHHHHHH-HHHHHTTCEEEESC
T ss_pred -----CCH-----HHHhcCCCCEEEECCCHHHHHHHH-HHHHHCCCcEEEEC
Confidence 111 2334 5889999999876555544 46677788877543
No 238
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=87.19 E-value=1.2 Score=50.35 Aligned_cols=37 Identities=30% Similarity=0.634 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
++..++|+|.|+ |.||..+++.|+..|. -+++++|..
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~-----~~V~~~~r~ 66 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGV-----NQVHVVDNL 66 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-----SEEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCC-----ceEEEEECC
Confidence 356679999995 9999999999999993 378887653
No 239
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=87.14 E-value=1.6 Score=48.70 Aligned_cols=33 Identities=30% Similarity=0.297 Sum_probs=29.1
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
..+|+|+|+|.+|+.++..|...|. .++++|.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 3689999999999999999999996 68888753
No 240
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=87.06 E-value=1.9 Score=48.25 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=52.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC---CCcEEEEE
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTL 189 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN---p~V~v~~~ 189 (1099)
..+|.|+|+|++|..++-.|+..|. .+|.|+|-+ ..|++..+..|.... ..+++..
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~i~~- 68 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF-------------------KDKTKGDAIDLSNALPFTSPKKIYS- 68 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC-------------------HHHHHHHHHHHHTTGGGSCCCEEEE-
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC-------------------chHhHHHHHHHHHHHHhcCCeEEEE-
Confidence 4689999999999999999998884 578888842 235555455554433 4555654
Q ss_pred ecCCChhhccCCcEEEEecC
Q 001331 190 TSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 190 ~~~l~~~~l~~~dvVV~~~~ 209 (1099)
. +.+-+.+.|+||++..
T Consensus 69 -~--~~~a~~~aDvVii~ag 85 (326)
T 2zqz_A 69 -A--EYSDAKDADLVVITAG 85 (326)
T ss_dssp -C--CGGGGGGCSEEEECCC
T ss_pred -C--CHHHhCCCCEEEEcCC
Confidence 2 3455889999998864
No 241
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=87.04 E-value=2.7 Score=47.39 Aligned_cols=102 Identities=13% Similarity=0.160 Sum_probs=60.6
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCc-ccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEE
Q 001331 112 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVEL-WDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 189 (1099)
Q Consensus 112 L~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~-~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~ 189 (1099)
+...+|||.|+ |.+|..+++.|...|..+|++++...-.. ..+. -.+ .++..
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~------------------------~~~--~v~~~ 83 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP------------------------DHP--AVRFS 83 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC------------------------CCT--TEEEE
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc------------------------CCC--ceEEE
Confidence 55678999995 89999999999999955888887543211 0010 012 23444
Q ss_pred ecCCCh-----hhccCCcEEEEecCC--H---------------HHHHHHHHHHHhc-CCCc-eeEEEeecceeEE
Q 001331 190 TSKLTK-----EQLSDFQAVVFTDIS--L---------------DKAIEFDDFCHNH-QPAI-SFIKAEVRGLFGS 241 (1099)
Q Consensus 190 ~~~l~~-----~~l~~~dvVV~~~~~--~---------------~~~~~ln~~c~~~-~~~i-pfI~~~~~G~~G~ 241 (1099)
..++.+ +.+.++|+||.+... . .....+-+.|++. + + .||.+++.+.+|.
T Consensus 84 ~~Dl~d~~~l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~--~~~~V~~SS~~vyg~ 157 (377)
T 2q1s_A 84 ETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR--LKKVVYSAAGCSIAE 157 (377)
T ss_dssp CSCTTCHHHHHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS--CCEEEEEEEC-----
T ss_pred ECCCCCHHHHHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--CCeEEEeCCHHHcCC
Confidence 444432 245678988876431 1 1123455777777 5 4 7888888766653
No 242
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.04 E-value=1.3 Score=47.84 Aligned_cols=66 Identities=11% Similarity=0.119 Sum_probs=44.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 194 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~ 194 (1099)
.+|.|||+|.+|..++++|.. |. +++++|.+. .+++.+.+. .+.+ .. .
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~-------------------~~~~~~~~~------g~~~--~~---~ 49 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTF-------------------EKALRHQEE------FGSE--AV---P 49 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TS-CEEEECSST-------------------HHHHHHHHH------HCCE--EC---C
T ss_pred CeEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCH-------------------HHHHHHHHC------CCcc--cC---H
Confidence 379999999999999999999 97 588887421 133332221 1221 11 3
Q ss_pred hhhccCCcEEEEecCCHH
Q 001331 195 KEQLSDFQAVVFTDISLD 212 (1099)
Q Consensus 195 ~~~l~~~dvVV~~~~~~~ 212 (1099)
.+.+.++|+||.|..+..
T Consensus 50 ~~~~~~~D~vi~~v~~~~ 67 (289)
T 2cvz_A 50 LERVAEARVIFTCLPTTR 67 (289)
T ss_dssp GGGGGGCSEEEECCSSHH
T ss_pred HHHHhCCCEEEEeCCChH
Confidence 345678999999987654
No 243
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=87.01 E-value=1.4 Score=49.11 Aligned_cols=39 Identities=23% Similarity=0.251 Sum_probs=28.6
Q ss_pred HHHhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 109 MRRLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 109 q~kL~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+..+.+.+|||.|+ |++|..+++.|...|...|++++..
T Consensus 41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECC
T ss_pred cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecC
Confidence 34566789999997 8999999999999996678888764
No 244
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=87.00 E-value=0.91 Score=48.76 Aligned_cols=36 Identities=31% Similarity=0.419 Sum_probs=30.4
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 44 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGA------DLVLAART 44 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcC------EEEEEeCC
Confidence 46778899998 67999999999999998 78888753
No 245
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=86.96 E-value=1.4 Score=48.96 Aligned_cols=36 Identities=22% Similarity=0.377 Sum_probs=30.8
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+....+|.|||+|.+|..++++|+..|. .|+++|.+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 63 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRT 63 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSC
T ss_pred ccCCCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 4456799999999999999999999997 78888754
No 246
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=86.95 E-value=0.66 Score=49.08 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=28.8
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
|.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~------~v~~~~r 37 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGA------TVVGTAT 37 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeC
Confidence 4567888887 68999999999999997 7888764
No 247
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=86.85 E-value=1.8 Score=48.14 Aligned_cols=72 Identities=22% Similarity=0.243 Sum_probs=52.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhC-CCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC---CCcEEEEEe
Q 001331 115 SNILVSGMQGLGAEIAKNLILAG-VKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN---NAVVLSTLT 190 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaG-Vg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN---p~V~v~~~~ 190 (1099)
.||.|+|+|.+|..++-.|+..| +++|.|+|-+ ..|++..+..|.... ..++++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v~~-- 59 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWVWA-- 59 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEEEE--
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEEEE--
Confidence 37999999999999999999887 4679998842 235665555555533 3556665
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
. +.+-+.+.|+||.+..
T Consensus 60 ~--~~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 60 G--SYGDLEGARAVVLAAG 76 (310)
T ss_dssp C--CGGGGTTEEEEEECCC
T ss_pred C--CHHHhCCCCEEEECCC
Confidence 2 3456889999998764
No 248
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.85 E-value=1.4 Score=49.05 Aligned_cols=34 Identities=21% Similarity=0.589 Sum_probs=29.8
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.||.|||+|.+|..++..|+..|.. ++|+++|-+
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~----~ev~l~Di~ 40 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIA----DEIVLIDAN 40 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 5899999999999999999999863 689999853
No 249
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=86.82 E-value=1.1 Score=49.17 Aligned_cols=35 Identities=20% Similarity=0.420 Sum_probs=29.8
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++|+|.| .||||.++++.|+..|. +++++|.+
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~------~V~~~~r~ 64 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA------RLVLSDVD 64 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 5677899998 58899999999999998 78887643
No 250
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.76 E-value=2 Score=47.97 Aligned_cols=36 Identities=25% Similarity=0.245 Sum_probs=29.9
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
+.-.+|.|||+|..|+.+|.+|+.+|. .|+++|.+.
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~ 39 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEP 39 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 345789999999999999999999998 789988643
No 251
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=86.72 E-value=0.7 Score=50.26 Aligned_cols=64 Identities=11% Similarity=0.186 Sum_probs=43.2
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
.+.++.++|.| .||||.++++.|+..|. +++++|... ..+.+.+++.+....+
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~~~~------------------~~~~~~~~~~~~~~~~-- 79 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF------DIAITGIGD------------------AEGVAPVIAELSGLGA-- 79 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCC------------------HHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC------eEEEEeCCC------------------HHHHHHHHHHHHhcCC--
Confidence 46677888888 68999999999999998 788877311 1234444555555443
Q ss_pred eEEEEecccCc
Q 001331 587 NIEALQNRVGP 597 (1099)
Q Consensus 587 ~i~~~~~~v~~ 597 (1099)
++..+...+..
T Consensus 80 ~~~~~~~Dv~d 90 (280)
T 4da9_A 80 RVIFLRADLAD 90 (280)
T ss_dssp CEEEEECCTTS
T ss_pred cEEEEEecCCC
Confidence 55666666654
No 252
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=86.69 E-value=1.7 Score=48.33 Aligned_cols=32 Identities=19% Similarity=0.335 Sum_probs=29.0
Q ss_pred cEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 513 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 513 ~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
||.|||+|.+|..++..|+..|+ +.|+++|-|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l-----~el~L~Di~ 32 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGY-----DDLLLIART 32 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTC-----SCEEEECSS
T ss_pred CEEEECcCHHHHHHHHHHHhCCC-----CEEEEEcCC
Confidence 68999999999999999999988 689999854
No 253
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=86.66 E-value=2 Score=47.46 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=29.0
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEec
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
.||.|||+|++|+.++-.|++.|.+ ++|.|+|
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~----~el~L~D 32 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVD 32 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCC----CEEEEEe
Confidence 4799999999999999999999975 7899887
No 254
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=86.64 E-value=2.1 Score=44.17 Aligned_cols=97 Identities=12% Similarity=0.178 Sum_probs=61.3
Q ss_pred CeEEEEc-CChHHHHHHHHHH-HhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 115 SNILVSG-MQGLGAEIAKNLI-LAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 115 s~VlIiG-~gglG~EiaKnLv-laGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
++|+|.| .|++|.++++.|+ ..|. +|++++.+.-. ++ +.+.+..+ .+.....+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~------------------~~----~~~~~~~~--~~~~~~~D 60 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKT------------------RI----PPEIIDHE--RVTVIEGS 60 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHH------------------HS----CHHHHTST--TEEEEECC
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccc------------------cc----hhhccCCC--ceEEEECC
Confidence 4599999 5999999999999 8897 78887753210 10 11112233 34455555
Q ss_pred CCh-----hhccCCcEEEEecC--CHHHHHHHHHHHHhcCCCc-eeEEEeeccee
Q 001331 193 LTK-----EQLSDFQAVVFTDI--SLDKAIEFDDFCHNHQPAI-SFIKAEVRGLF 239 (1099)
Q Consensus 193 l~~-----~~l~~~dvVV~~~~--~~~~~~~ln~~c~~~~~~i-pfI~~~~~G~~ 239 (1099)
+++ ..+.+.|+||.+.. +.. ...+-+.|++.+ + .+|..++.+.+
T Consensus 61 ~~d~~~~~~~~~~~d~vv~~ag~~n~~-~~~~~~~~~~~~--~~~iv~iSs~~~~ 112 (221)
T 3r6d_A 61 FQNPGXLEQAVTNAEVVFVGAMESGSD-MASIVKALSRXN--IRRVIGVSMAGLS 112 (221)
T ss_dssp TTCHHHHHHHHTTCSEEEESCCCCHHH-HHHHHHHHHHTT--CCEEEEEEETTTT
T ss_pred CCCHHHHHHHHcCCCEEEEcCCCCChh-HHHHHHHHHhcC--CCeEEEEeeceec
Confidence 542 35678899998764 334 556667777776 4 46666665543
No 255
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=86.63 E-value=1.1 Score=49.25 Aligned_cols=32 Identities=25% Similarity=0.449 Sum_probs=29.0
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 115 SNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 115 s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+|.||| +|.+|..+++.|...|. .++++|.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~-~V~~~~~~ 54 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGY-PISILDRE 54 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTT
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 5899999 99999999999999997 78888854
No 256
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=86.61 E-value=0.92 Score=48.73 Aligned_cols=35 Identities=17% Similarity=0.354 Sum_probs=29.7
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 43 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA------NVAVAGRS 43 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5677888887 78999999999999998 78888754
No 257
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=86.60 E-value=1 Score=48.16 Aligned_cols=34 Identities=12% Similarity=0.240 Sum_probs=30.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC---CeEEEEeCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGV---KSVTLHDEG 147 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGV---g~itlvD~d 147 (1099)
..+|.|||+|.+|+.++++|..+|. ..++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCC
Confidence 3589999999999999999999995 589999864
No 258
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=86.59 E-value=1.4 Score=48.01 Aligned_cols=23 Identities=13% Similarity=0.419 Sum_probs=19.9
Q ss_pred CcEEEEcC-CcchHHHHHHHHHcC
Q 001331 512 AKVFIVGS-GALGCEFLKNVALMG 534 (1099)
Q Consensus 512 ~~v~vvG~-GglG~evlk~La~~G 534 (1099)
++|+|.|+ |.||..+++.|+..|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g 25 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN 25 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS
T ss_pred CEEEEECCCchHHHHHHHHHHhCC
Confidence 37999995 999999999998876
No 259
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=86.58 E-value=5.1 Score=45.82 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=69.9
Q ss_pred HHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCC--CcEE
Q 001331 110 RRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN--AVVL 186 (1099)
Q Consensus 110 ~kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp--~V~v 186 (1099)
..+.+.+|||.| .|++|+++++.|+..|...++++|.. ..+.....+.|.+..+ ...+
T Consensus 31 ~~~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~v 91 (399)
T 3nzo_A 31 SVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDIS-------------------ENNMVELVRDIRSSFGYINGDF 91 (399)
T ss_dssp HHHHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSC-------------------HHHHHHHHHHHHHHTCCCSSEE
T ss_pred HHhCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECC-------------------cchHHHHHHHHHHhcCCCCCcE
Confidence 447789999999 58899999999999998889998742 2244455556665544 2467
Q ss_pred EEEecCCChh-----h--ccCCcEEEEecC--------CHH-----------HHHHHHHHHHhcCCCc-eeEEEee
Q 001331 187 STLTSKLTKE-----Q--LSDFQAVVFTDI--------SLD-----------KAIEFDDFCHNHQPAI-SFIKAEV 235 (1099)
Q Consensus 187 ~~~~~~l~~~-----~--l~~~dvVV~~~~--------~~~-----------~~~~ln~~c~~~~~~i-pfI~~~~ 235 (1099)
..+..++.+. . ..+.|+||.+.. +.. ....+-+.|++++ + .||..++
T Consensus 92 ~~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~g--v~r~V~iSS 165 (399)
T 3nzo_A 92 QTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAG--AKKYFCVST 165 (399)
T ss_dssp EEECCCTTSHHHHHHHHHCCCCSEEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEECC
T ss_pred EEEEEeCCCHHHHHHHHHhCCCCEEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEeC
Confidence 7777776431 1 247899886542 110 1225667888887 4 4565554
No 260
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=86.52 E-value=1.9 Score=46.87 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=48.7
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 115 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 115 s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
.+|.|||+ |.+|..++++|...|. +|+++|.+. .+++. +.+.. +.+ ..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~-------------------~~~~~----~~~~g--~~~----~~- 60 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAP-------------------EGRDR----LQGMG--IPL----TD- 60 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSH-------------------HHHHH----HHHTT--CCC----CC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCH-------------------HHHHH----HHhcC--CCc----CC-
Confidence 48999999 9999999999999996 788887422 12222 22221 221 11
Q ss_pred ChhhccCCcEEEEecCCHHHHHHHHHH
Q 001331 194 TKEQLSDFQAVVFTDISLDKAIEFDDF 220 (1099)
Q Consensus 194 ~~~~l~~~dvVV~~~~~~~~~~~ln~~ 220 (1099)
..+.+.++|+||+|..+......+.++
T Consensus 61 ~~~~~~~aDvVi~av~~~~~~~v~~~l 87 (286)
T 3c24_A 61 GDGWIDEADVVVLALPDNIIEKVAEDI 87 (286)
T ss_dssp SSGGGGTCSEEEECSCHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCchHHHHHHHHH
Confidence 234677899999998655443333333
No 261
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=86.47 E-value=0.45 Score=51.49 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=32.8
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
+.+ +|+|+|+||.|..++..|...|+++|++++.+.
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 467 999999999999999999999999999998643
No 262
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=86.46 E-value=0.83 Score=51.87 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=32.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+...+|+|+|+|++|..++..+...|. +|+++|.+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~ 199 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDIN 199 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 677999999999999999999999999 89999853
No 263
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=86.33 E-value=1.6 Score=48.05 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=31.4
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
|.+++|.|||+|.+|..+++.|..+|+ +++.+|..
T Consensus 120 l~g~tvGIIGlG~IG~~vA~~l~~~G~------~V~~~dr~ 154 (290)
T 3gvx_A 120 LYGKALGILGYGGIGRRVAHLAKAFGM------RVIAYTRS 154 (290)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTC------EEEEECSS
T ss_pred eecchheeeccCchhHHHHHHHHhhCc------EEEEEecc
Confidence 567799999999999999999999998 88888754
No 264
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=86.31 E-value=3.1 Score=44.71 Aligned_cols=93 Identities=15% Similarity=0.171 Sum_probs=58.0
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC
Q 001331 116 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 194 (1099)
Q Consensus 116 ~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~ 194 (1099)
+|+|.|+ |++|..+++.|...+-.+|++++.+.-....+ ..+. ++....+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------------~~~~--v~~~~~D~~ 54 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------------WRGK--VSVRQLDYF 54 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------------GBTT--BEEEECCTT
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------------hhCC--CEEEEcCCC
Confidence 6999995 88999999999887334677776543211111 0122 334444543
Q ss_pred h-----hhccCCcEEEEecCC-------HHHHHHHHHHHHhcCCCc-eeEEEeecc
Q 001331 195 K-----EQLSDFQAVVFTDIS-------LDKAIEFDDFCHNHQPAI-SFIKAEVRG 237 (1099)
Q Consensus 195 ~-----~~l~~~dvVV~~~~~-------~~~~~~ln~~c~~~~~~i-pfI~~~~~G 237 (1099)
+ ..+.++|+||.+... ......+-+.|++.+ + .||..++.|
T Consensus 55 d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~g--v~~iv~~Ss~~ 108 (289)
T 3e48_A 55 NQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSG--VAHIIFIGYYA 108 (289)
T ss_dssp CHHHHHHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTT--CCEEEEEEESC
T ss_pred CHHHHHHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcC--CCEEEEEcccC
Confidence 2 356788999887542 233456778888888 5 477766644
No 265
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=86.28 E-value=1.8 Score=46.46 Aligned_cols=63 Identities=21% Similarity=0.416 Sum_probs=47.2
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 112 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 112 L~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
|++++|+|.| .||+|.++++.|+..|. ++.++|.+ ..+.+...+.|.+..+...+....
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 67 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRR-------------------EENVNETIKEIRAQYPDAILQPVV 67 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESS-------------------HHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHhhCCCceEEEEe
Confidence 5678888888 57999999999999997 67777642 235666777788877776766665
Q ss_pred cCCC
Q 001331 191 SKLT 194 (1099)
Q Consensus 191 ~~l~ 194 (1099)
.+++
T Consensus 68 ~D~~ 71 (267)
T 3t4x_A 68 ADLG 71 (267)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 5553
No 266
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=86.24 E-value=4.4 Score=47.53 Aligned_cols=32 Identities=28% Similarity=0.395 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+|.|||+|.+|+.+|.+|+.+|. .++++|.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~ 69 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESD 69 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECC
Confidence 479999999999999999999997 79998854
No 267
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=86.20 E-value=0.82 Score=49.51 Aligned_cols=35 Identities=23% Similarity=0.458 Sum_probs=29.4
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~------~V~~~~r 58 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGA------RILINGT 58 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEECCS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 36677888887 68999999999999998 7888764
No 268
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=86.15 E-value=1.7 Score=48.03 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.5
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.||.|+|+|.+|..++..|+..|.. ++++++|-+
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~----~~v~L~D~~ 34 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDV----DEIALVDIA 34 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCC----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CeEEEEECC
Confidence 3799999999999999999999973 589998844
No 269
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=86.15 E-value=0.69 Score=50.49 Aligned_cols=33 Identities=12% Similarity=0.164 Sum_probs=30.2
Q ss_pred HhcCcEEEEcCCc-chHHHHHHHHHcCCCCCCCccEEEec
Q 001331 509 LEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 509 L~~~~v~vvG~Gg-lG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
|.+++++|||.|+ +|..+++.|+.+|. .+++++
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gA------tVtv~~ 181 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNY------TVSVCH 181 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCC------eEEEEe
Confidence 8899999999997 79999999999997 788885
No 270
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=86.13 E-value=4.6 Score=44.68 Aligned_cols=72 Identities=17% Similarity=0.110 Sum_probs=47.7
Q ss_pred eEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHH----hCCCcEEEEEe
Q 001331 116 NILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE----LNNAVVLSTLT 190 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~e----LNp~V~v~~~~ 190 (1099)
+|.|+|+|.+|..+|..|+..|. .+++++|.+. .|++.....+.. .....++....
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~~i~~t~ 62 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE-------------------GIPQGKALDMYESGPVGLFDTKVTGSN 62 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS-------------------SHHHHHHHHHHTTHHHHTCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------hHHHHHHHhHHhhhhcccCCcEEEECC
Confidence 79999999999999999998763 5799998642 133322222221 23344555533
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
+ + ++ +.+.|+||.+..
T Consensus 63 d-~-~~-l~~aDvViiav~ 78 (310)
T 1guz_A 63 D-Y-AD-TANSDIVIITAG 78 (310)
T ss_dssp C-G-GG-GTTCSEEEECCS
T ss_pred C-H-HH-HCCCCEEEEeCC
Confidence 2 2 23 889999999874
No 271
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=86.12 E-value=0.77 Score=51.69 Aligned_cols=33 Identities=12% Similarity=0.207 Sum_probs=27.8
Q ss_pred CcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+|+|.| .|.||..+++.|+..|. -+++.+|.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~-----~~v~~~d~~ 34 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTD-----HHIFEVHRQ 34 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCC-----CEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEECCC
Confidence 3799999 69999999999999986 477777654
No 272
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=86.09 E-value=1.9 Score=48.12 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=29.4
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.||.|||+|.+|..++..|+..|. ..++++|-|
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~-----~~v~L~Di~ 37 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNL-----GDVVLFDIV 37 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----CEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEeCC
Confidence 589999999999999999999998 459999854
No 273
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=86.08 E-value=0.64 Score=53.23 Aligned_cols=38 Identities=32% Similarity=0.392 Sum_probs=35.8
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
+|+..+|+|+|+|..|..+|+.|+.+|+++|+++|..-
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 57889999999999999999999999999999999874
No 274
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=86.07 E-value=0.51 Score=51.90 Aligned_cols=35 Identities=11% Similarity=0.185 Sum_probs=32.0
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+.+++++|+|+||.|..++..|+..|+ ++|+|++.
T Consensus 120 ~~~k~vlvlGaGGaaraia~~L~~~G~-----~~v~v~nR 154 (282)
T 3fbt_A 120 IKNNICVVLGSGGAARAVLQYLKDNFA-----KDIYVVTR 154 (282)
T ss_dssp CTTSEEEEECSSTTHHHHHHHHHHTTC-----SEEEEEES
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCC-----CEEEEEeC
Confidence 568899999999999999999999999 89999863
No 275
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=86.07 E-value=0.75 Score=52.13 Aligned_cols=77 Identities=12% Similarity=0.140 Sum_probs=51.4
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHH-cCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVAL-MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~-~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
....+|.|||+|+.|..++..|.. .++ .+++|+|.+ ..|++.+++.+.. .+++.
T Consensus 127 ~~~~~v~iIGaG~~a~~~a~al~~~~~~-----~~V~V~~r~-------------------~~~a~~la~~~~~-~~g~~ 181 (350)
T 1x7d_A 127 PNARKMALIGNGAQSEFQALAFHKHLGI-----EEIVAYDTD-------------------PLATAKLIANLKE-YSGLT 181 (350)
T ss_dssp TTCCEEEEECCSTTHHHHHHHHHHHSCC-----CEEEEECSS-------------------HHHHHHHHHHHTT-CTTCE
T ss_pred ccCCeEEEECCcHHHHHHHHHHHHhCCC-----cEEEEEcCC-------------------HHHHHHHHHHHHh-ccCce
Confidence 356799999999999999999864 466 788887632 2355666655533 23444
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEccCc
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINALDN 620 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn 620 (1099)
+..+. +. .+.+.+.|+|++|+-+
T Consensus 182 ~~~~~-----~~-----~eav~~aDiVi~aTps 204 (350)
T 1x7d_A 182 IRRAS-----SV-----AEAVKGVDIITTVTAD 204 (350)
T ss_dssp EEECS-----SH-----HHHHTTCSEEEECCCC
T ss_pred EEEeC-----CH-----HHHHhcCCEEEEeccC
Confidence 43321 11 2456789999999864
No 276
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=86.06 E-value=1.6 Score=48.03 Aligned_cols=35 Identities=29% Similarity=0.318 Sum_probs=28.8
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 112 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 112 L~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
|++.+|||.|+ |++|..+++.|+..|. +|+++|..
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRR 36 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECC
Confidence 35678999996 9999999999999995 78888753
No 277
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=86.03 E-value=2.8 Score=46.06 Aligned_cols=95 Identities=16% Similarity=0.184 Sum_probs=58.3
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC
Q 001331 116 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 194 (1099)
Q Consensus 116 ~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~ 194 (1099)
+|||.|+ |++|..+++.|...|. +|++++...-....+. . + .++....++.
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~-----------------------~--~--~~~~~~~Dl~ 66 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLA-----------------------Y--L--EPECRVAEML 66 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGG-----------------------G--G--CCEEEECCTT
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhc-----------------------c--C--CeEEEEecCC
Confidence 7999995 9999999999999994 7888876432211110 0 1 2233334443
Q ss_pred h-----hhccCCcEEEEecCC---------------HHHHHHHHHHHHhcCCCc-eeEEEeecceeE
Q 001331 195 K-----EQLSDFQAVVFTDIS---------------LDKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 240 (1099)
Q Consensus 195 ~-----~~l~~~dvVV~~~~~---------------~~~~~~ln~~c~~~~~~i-pfI~~~~~G~~G 240 (1099)
+ +.+.++|+||.+... ......+-+.|++.+ + .||.+++.+.+|
T Consensus 67 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~v~~SS~~~~~ 131 (342)
T 2x4g_A 67 DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQAR--VPRILYVGSAYAMP 131 (342)
T ss_dssp CHHHHHHHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHT--CSCEEEECCGGGSC
T ss_pred CHHHHHHHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEECCHHhhC
Confidence 2 245577887765421 112245667788776 4 688888777655
No 278
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=86.01 E-value=1.3 Score=53.22 Aligned_cols=85 Identities=14% Similarity=0.148 Sum_probs=63.2
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC-
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL- 193 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l- 193 (1099)
.+|+|+|+|-+|..+|+.|...|. .++++|.+.-....+. .+...+.
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~-------------------------------~~i~gD~t 396 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV-PFILIDRQESPVCNDH-------------------------------VVVYGDAT 396 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCSSCCSS-------------------------------CEEESCSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-CEEEEECChHHHhhcC-------------------------------CEEEeCCC
Confidence 899999999999999999999997 6899997654332221 1222222
Q ss_pred -----ChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeE
Q 001331 194 -----TKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFI 231 (1099)
Q Consensus 194 -----~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI 231 (1099)
.+.-+.++|.||++..+.+....+...+++.++++..|
T Consensus 397 ~~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~~~ii 439 (565)
T 4gx0_A 397 VGQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSHIRIV 439 (565)
T ss_dssp SSTHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSSSEEE
T ss_pred CHHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCCCEEE
Confidence 22346789999999988888888899999998544444
No 279
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=85.96 E-value=1.7 Score=46.73 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=64.2
Q ss_pred eEEEEcC-ChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 116 NILVSGM-QGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 116 ~VlIiG~-gglG~EiaKnLvla-GVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
+|.|+|+ |.+|..+++.+... |..=+.++|.. +|+ +.+....++|-|....-..
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~---------------~dl---------~~~~~~~~DvvIDfT~p~a 57 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG---------------DPL---------SLLTDGNTEVVIDFTHPDV 57 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT---------------CCT---------HHHHHTTCCEEEECSCTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC---------------CCH---------HHHhccCCcEEEEccChHH
Confidence 7999997 99999999998765 76445566642 111 1122235666665543332
Q ss_pred Chhh-----ccCCcEEEEecC-CHHHHHHHHHHHHhc-CCCceeEEEeecceeEEE
Q 001331 194 TKEQ-----LSDFQAVVFTDI-SLDKAIEFDDFCHNH-QPAISFIKAEVRGLFGSV 242 (1099)
Q Consensus 194 ~~~~-----l~~~dvVV~~~~-~~~~~~~ln~~c~~~-~~~ipfI~~~~~G~~G~v 242 (1099)
..++ -.+.++||.++. +.+....|.++|++. + +|++.+..+++...+
T Consensus 58 ~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~--~~vv~a~N~siGv~l 111 (245)
T 1p9l_A 58 VMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPN--TSVLIAPNFAIGAVL 111 (245)
T ss_dssp HHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTT--CEEEECSCCCHHHHH
T ss_pred HHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCC--CCEEEECCccHHHHH
Confidence 2222 235678887664 556667888888876 7 888887776654433
No 280
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=85.93 E-value=1.2 Score=48.93 Aligned_cols=32 Identities=31% Similarity=0.440 Sum_probs=28.9
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+|.|||+|.+|..++++|...|. .++++|.+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~-~V~~~d~~ 35 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLV 35 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCC-eEEEEcCC
Confidence 589999999999999999999997 78888753
No 281
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.89 E-value=0.76 Score=52.58 Aligned_cols=36 Identities=22% Similarity=0.221 Sum_probs=33.1
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+..++|+|+|+|++|..+++.+...|. +|+++|..
T Consensus 165 ~l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~ 200 (377)
T 2vhw_A 165 GVEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDIN 200 (377)
T ss_dssp TBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCC
Confidence 5889999999999999999999999999 89999853
No 282
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=85.88 E-value=0.84 Score=50.69 Aligned_cols=74 Identities=18% Similarity=0.196 Sum_probs=48.6
Q ss_pred HHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCC
Q 001331 507 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPR 585 (1099)
Q Consensus 507 ~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~ 585 (1099)
..|.+++++|.| .||||.++++.|+..|. +++++|.+.- +.|. ..-...+.+.+++.+....+
T Consensus 23 ~~l~gk~vlVTGas~GIG~aia~~la~~G~------~Vv~~~r~~~----~~~~-----~~~~~~~~~~~~~~~~~~~~- 86 (322)
T 3qlj_A 23 GVVDGRVVIVTGAGGGIGRAHALAFAAEGA------RVVVNDIGVG----LDGS-----PASGGSAAQSVVDEITAAGG- 86 (322)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEECCCBC----TTSS-----BTCTTSHHHHHHHHHHHTTC-
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCccc----cccc-----ccccHHHHHHHHHHHHhcCC-
Confidence 346777888887 68999999999999997 8889886531 1111 11223455566666665543
Q ss_pred CeEEEEecccCc
Q 001331 586 LNIEALQNRVGP 597 (1099)
Q Consensus 586 ~~i~~~~~~v~~ 597 (1099)
++..+...+..
T Consensus 87 -~~~~~~~Dv~d 97 (322)
T 3qlj_A 87 -EAVADGSNVAD 97 (322)
T ss_dssp -EEEEECCCTTS
T ss_pred -cEEEEECCCCC
Confidence 56666655554
No 283
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=85.88 E-value=0.85 Score=50.36 Aligned_cols=33 Identities=12% Similarity=0.239 Sum_probs=29.5
Q ss_pred HhcCcEEEEcCCc-chHHHHHHHHHcCCCCCCCccEEEec
Q 001331 509 LEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 509 L~~~~v~vvG~Gg-lG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
+..++|+|||.|. +|..+++.|+..|. ++++++
T Consensus 163 l~gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 196 (301)
T 1a4i_A 163 IAGRHAVVVGRSKIVGAPMHDLLLWNNA------TVTTCH 196 (301)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEE
Confidence 6678999999996 79999999999997 788886
No 284
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=85.87 E-value=1.2 Score=48.67 Aligned_cols=101 Identities=16% Similarity=0.167 Sum_probs=0.0
Q ss_pred hcCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEE-EecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 510 EDAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLT-ITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 510 ~~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~-ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
++.||.|+|| |.+|..+++.++...= -.++ ++|.+.-...--.-.-+..-...|
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~-----~elva~~d~~~~~~~g~d~~~~~g~~~~~------------------- 59 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEG-----VQLGAALEREGSSLLGSDAGELAGAGKTG------------------- 59 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTT-----EECCCEECCTTCTTCSCCTTCSSSSSCCS-------------------
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCC-----CEEEEEEecCchhhhhhhHHHHcCCCcCC-------------------
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcc
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 646 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~ 646 (1099)
.....++ ++.+..+|+||+++ .+.+-..+-..|.++++|++ +||.|+
T Consensus 60 --------v~~~~dl--~~~l~~~DvVIDft-~p~~~~~~~~~a~~~G~~vV-igTtG~ 106 (273)
T 1dih_A 60 --------VTVQSSL--DAVKDDFDVFIDFT-RPEGTLNHLAFCRQHGKGMV-IGTTGF 106 (273)
T ss_dssp --------CCEESCS--TTTTTSCSEEEECS-CHHHHHHHHHHHHHTTCEEE-ECCCCC
T ss_pred --------ceecCCH--HHHhcCCCEEEEcC-ChHHHHHHHHHHHhCCCCEE-EECCCC
No 285
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=85.85 E-value=1.2 Score=48.23 Aligned_cols=34 Identities=24% Similarity=0.493 Sum_probs=28.3
Q ss_pred hcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 510 EDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 510 ~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 37 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA------KILLGARR 37 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECC
Confidence 466788888 58999999999999998 78888743
No 286
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=85.85 E-value=0.86 Score=47.81 Aligned_cols=31 Identities=19% Similarity=0.389 Sum_probs=27.0
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEE-ecC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTI-TDD 548 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~i-vD~ 548 (1099)
.+|.|||+|.+|..+++.|+..|. .+++ +|.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~------~V~~v~~r 55 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQI------PAIIANSR 55 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTC------CEEEECTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------EEEEEECC
Confidence 589999999999999999999997 5666 554
No 287
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=85.85 E-value=1.5 Score=51.92 Aligned_cols=37 Identities=24% Similarity=0.371 Sum_probs=29.4
Q ss_pred HHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 109 MRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 109 q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
...|.+++|.|||+|..|..+|.+|+..|. .|+++|.
T Consensus 10 ~~~~~~~~IgvIGlG~MG~~lA~~La~~G~-~V~v~~r 46 (480)
T 2zyd_A 10 HHHMSKQQIGVVGMAVMGRNLALNIESRGY-TVSIFNR 46 (480)
T ss_dssp -----CBSEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred ccccCCCeEEEEccHHHHHHHHHHHHhCCC-eEEEEeC
Confidence 456888999999999999999999999997 6888774
No 288
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=85.82 E-value=1.1 Score=50.69 Aligned_cols=33 Identities=18% Similarity=0.295 Sum_probs=28.5
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.++|+|.|+ |.||..+++.|+..|. +++++|.+
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH------YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC------eEEEEECC
Confidence 368999996 9999999999999997 78888754
No 289
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=85.55 E-value=1.3 Score=48.02 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=31.1
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+|.++.++|.| .||||.++++.|+..|. +++++|.+
T Consensus 8 ~l~~k~~lVTGas~gIG~aia~~la~~G~------~V~~~~~~ 44 (286)
T 3uve_A 8 RVEGKVAFVTGAARGQGRSHAVRLAQEGA------DIIAVDIC 44 (286)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------eEEEEecc
Confidence 46778899998 67899999999999998 88898865
No 290
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=85.55 E-value=2.2 Score=48.86 Aligned_cols=89 Identities=15% Similarity=0.171 Sum_probs=59.1
Q ss_pred HHHHHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhh
Q 001331 504 KLQKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSI 582 (1099)
Q Consensus 504 ~~q~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~ 582 (1099)
.....+.+++|+|.| .|+||+++++.|+..|. .+++++|.. ..+...+.+.+.+.
T Consensus 28 ~~~~~~~~k~vLVTGatG~IG~~l~~~L~~~g~-----~~V~~~~r~-------------------~~~~~~~~~~l~~~ 83 (399)
T 3nzo_A 28 ELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNP-----QKLHVVDIS-------------------ENNMVELVRDIRSS 83 (399)
T ss_dssp HHHHHHHTCEEEEETTTSHHHHHHHHHHHTTCC-----SEEEEECSC-------------------HHHHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEEcCChHHHHHHHHHHHHCCC-----CEEEEEECC-------------------cchHHHHHHHHHHh
Confidence 344567889999999 58899999999999996 588887632 22333344455555
Q ss_pred CC--CCeEEEEecccCcccccccchhhh--cCCCEEEEccC
Q 001331 583 NP--RLNIEALQNRVGPETENVFDDTFW--ENITCVINALD 619 (1099)
Q Consensus 583 np--~~~i~~~~~~v~~~~e~~~~~~~~--~~~DvVi~alD 619 (1099)
.+ ...++.+...+..... + ..++ .++|+||++.-
T Consensus 84 ~~~~~~~v~~~~~Dl~d~~~-~--~~~~~~~~~D~Vih~Aa 121 (399)
T 3nzo_A 84 FGYINGDFQTFALDIGSIEY-D--AFIKADGQYDYVLNLSA 121 (399)
T ss_dssp TCCCSSEEEEECCCTTSHHH-H--HHHHHCCCCSEEEECCC
T ss_pred cCCCCCcEEEEEEeCCCHHH-H--HHHHHhCCCCEEEECCC
Confidence 44 3467777776665321 1 1222 57899998753
No 291
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=85.51 E-value=1.7 Score=51.09 Aligned_cols=93 Identities=14% Similarity=0.062 Sum_probs=55.4
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
.+...+|+|+|+|++|..++..|+..|--+|+++|.+. .|++.+.+ . +.+.+ ..
T Consensus 20 ~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~-------------------~ka~~la~----~-~~~~~--~~ 73 (467)
T 2axq_A 20 RHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTL-------------------ANAQALAK----P-SGSKA--IS 73 (467)
T ss_dssp ---CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSH-------------------HHHHHHHG----G-GTCEE--EE
T ss_pred CCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCH-------------------HHHHHHHH----h-cCCcE--EE
Confidence 45667999999999999999999998433799987532 23333222 1 22322 12
Q ss_pred cCCC-----hhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEE
Q 001331 191 SKLT-----KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIK 232 (1099)
Q Consensus 191 ~~l~-----~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~ 232 (1099)
.++. .+.+.++|+||.|.... ....+.+.|.+.+ ..++.
T Consensus 74 ~D~~d~~~l~~~l~~~DvVIn~tp~~-~~~~v~~a~l~~g--~~vvd 117 (467)
T 2axq_A 74 LDVTDDSALDKVLADNDVVISLIPYT-FHPNVVKSAIRTK--TDVVT 117 (467)
T ss_dssp CCTTCHHHHHHHHHTSSEEEECSCGG-GHHHHHHHHHHHT--CEEEE
T ss_pred EecCCHHHHHHHHcCCCEEEECCchh-hhHHHHHHHHhcC--CEEEE
Confidence 2221 13456889988886532 2234566777777 55554
No 292
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=85.49 E-value=0.89 Score=49.51 Aligned_cols=36 Identities=25% Similarity=0.350 Sum_probs=30.0
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~------~V~~~~r~ 41 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGA------KVVVTARN 41 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEECCSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 35677888887 68999999999999998 78888754
No 293
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=85.46 E-value=2.2 Score=47.54 Aligned_cols=73 Identities=21% Similarity=0.277 Sum_probs=49.8
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhC---CCCeE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN---PRLNI 588 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~n---p~~~i 588 (1099)
.||.|||+|.+|..++-.|+..|.. ..|.++|-| ..|++..+.-+.... +.+++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~~~~g~~~dl~~~~~~~~~~~v 62 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIA----EEFVIVDVV-------------------KDRTKGDALDLEDAQAFTAPKKI 62 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECSS-------------------HHHHHHHHHHHHGGGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeCC-------------------chHHHHHHHHHHHHHHhcCCeEE
Confidence 6899999999999999999999973 678888732 234444444444332 34455
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccC
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALD 619 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD 619 (1099)
.+ +. .+-+++.|+||.+..
T Consensus 63 ~~-----~~-------~~a~~~aDvVii~ag 81 (318)
T 1ez4_A 63 YS-----GE-------YSDCKDADLVVITAG 81 (318)
T ss_dssp EE-----CC-------GGGGTTCSEEEECCC
T ss_pred EE-----CC-------HHHhCCCCEEEECCC
Confidence 53 11 123689999998864
No 294
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=85.45 E-value=1.2 Score=48.87 Aligned_cols=34 Identities=18% Similarity=0.242 Sum_probs=29.8
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
..+|.|||+|.+|+.++++|+..|. +++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~------~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG------GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT------CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC------eEEEEeCCH
Confidence 4689999999999999999999997 788887543
No 295
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=85.43 E-value=1.4 Score=47.60 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=47.0
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.+.-....+.. .. -...+.+.+++.+.... .
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~------~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~--~ 77 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA------DIIACDICAPVSASVTY----AP--ASPEDLDETARLVEDQG--R 77 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCCCTTCCS----CC--CCHHHHHHHHHHHHTTT--C
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeccccccccccc----cc--cCHHHHHHHHHHHHhcC--C
Confidence 46778899998 68999999999999998 88888864311111110 00 11234455555555443 3
Q ss_pred eEEEEecccCc
Q 001331 587 NIEALQNRVGP 597 (1099)
Q Consensus 587 ~i~~~~~~v~~ 597 (1099)
++..+...+..
T Consensus 78 ~~~~~~~Dv~~ 88 (280)
T 3pgx_A 78 KALTRVLDVRD 88 (280)
T ss_dssp CEEEEECCTTC
T ss_pred eEEEEEcCCCC
Confidence 55566555554
No 296
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=85.42 E-value=2.6 Score=46.90 Aligned_cols=37 Identities=19% Similarity=0.199 Sum_probs=31.5
Q ss_pred HHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 507 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 507 ~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..+.+++|+|.| .|.||..+++.|+..|. +++++|.+
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA------TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC------eEEEEeCC
Confidence 356788999999 69999999999999987 78888754
No 297
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=85.40 E-value=1.3 Score=47.77 Aligned_cols=76 Identities=18% Similarity=0.119 Sum_probs=46.9
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.+.-..+.+.+. . -...+.+.+++.+...++
T Consensus 8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~------~V~~~~r~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~-- 73 (277)
T 3tsc_A 8 KLEGRVAFITGAARGQGRAHAVRMAAEGA------DIIAVDIAGKLPSCVPYD----P--ASPDDLSETVRLVEAANR-- 73 (277)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEECCSCCCTTCCSC----C--CCHHHHHHHHHHHHHTTC--
T ss_pred ccCCCEEEEECCccHHHHHHHHHHHHcCC------EEEEEecccccccccccc----c--cCHHHHHHHHHHHHhcCC--
Confidence 46778899998 68999999999999998 888888643222211111 1 112344444455554443
Q ss_pred eEEEEecccCc
Q 001331 587 NIEALQNRVGP 597 (1099)
Q Consensus 587 ~i~~~~~~v~~ 597 (1099)
++..+...+..
T Consensus 74 ~~~~~~~D~~~ 84 (277)
T 3tsc_A 74 RIVAAVVDTRD 84 (277)
T ss_dssp CEEEEECCTTC
T ss_pred eEEEEECCCCC
Confidence 45555555554
No 298
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=85.40 E-value=1.4 Score=48.64 Aligned_cols=36 Identities=28% Similarity=0.321 Sum_probs=28.9
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+..++|+|.| .|+||..+++.|+..|. +++++|.+
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERGD------KVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCCC------EEEEEECC
Confidence 35567899998 69999999999999996 78888754
No 299
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=85.36 E-value=1.7 Score=48.38 Aligned_cols=93 Identities=14% Similarity=0.110 Sum_probs=58.3
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 112 LFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 112 L~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
|...+|+|.|+ |.+|..+++.|...| .++++++.+.-. ...|+.. .+.+.. +. ++...
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g-~~V~~l~R~~~~---------------~~~~~~~-~~~l~~--~~--v~~~~ 66 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAH-RPTYILARPGPR---------------SPSKAKI-FKALED--KG--AIIVY 66 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTT-CCEEEEECSSCC---------------CHHHHHH-HHHHHH--TT--CEEEE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCC-CCEEEEECCCCC---------------ChhHHHH-HHHHHh--CC--cEEEE
Confidence 44678999998 899999999999999 577777653210 0112221 122222 33 34445
Q ss_pred cCCCh-----hhcc--CCcEEEEecC--CHHHHHHHHHHHHhcC
Q 001331 191 SKLTK-----EQLS--DFQAVVFTDI--SLDKAIEFDDFCHNHQ 225 (1099)
Q Consensus 191 ~~l~~-----~~l~--~~dvVV~~~~--~~~~~~~ln~~c~~~~ 225 (1099)
.++++ ..+. +.|+||.+.. +......+-+.|++.+
T Consensus 67 ~Dl~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 67 GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp CCTTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHHHC
T ss_pred eecCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHHcC
Confidence 55533 3466 8999998765 4555667788888876
No 300
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=85.29 E-value=1.6 Score=47.47 Aligned_cols=36 Identities=14% Similarity=0.342 Sum_probs=30.1
Q ss_pred HHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 507 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 507 ~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
..|.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~------~V~~~~r 57 (281)
T 3v2h_A 21 QSMMTKTAVITGSTSGIGLAIARTLAKAGA------NIVLNGF 57 (281)
T ss_dssp -CCTTCEEEEETCSSHHHHHHHHHHHHTTC------EEEEECC
T ss_pred hccCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 356778899998 68999999999999998 7888764
No 301
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=85.20 E-value=1 Score=48.97 Aligned_cols=36 Identities=19% Similarity=0.350 Sum_probs=30.6
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 65 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA------QVAVAARH 65 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 36778899998 68999999999999997 78888753
No 302
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=85.19 E-value=0.55 Score=47.03 Aligned_cols=32 Identities=28% Similarity=0.396 Sum_probs=29.4
Q ss_pred cEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 513 KVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 513 ~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
+|+|||+|.+|++++..|++.|. +++|+|...
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~------~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGL------KVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC------CEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCC------cEEEEeCCC
Confidence 79999999999999999999997 899998754
No 303
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=85.19 E-value=1.2 Score=48.17 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=32.1
Q ss_pred HHHHHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 504 KLQKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 504 ~~q~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.....|.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~r 65 (275)
T 4imr_A 26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGA------HVILHGV 65 (275)
T ss_dssp HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEcC
Confidence 344557788888888 68999999999999998 7888774
No 304
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=85.18 E-value=2.1 Score=45.50 Aligned_cols=53 Identities=25% Similarity=0.288 Sum_probs=40.1
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCC
Q 001331 111 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNA 183 (1099)
Q Consensus 111 kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~ 183 (1099)
.+.+++|+|.| .||+|.++++.|+..|. ++.++|.+ ..+++.+.+.+.+.++.
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~~~~~~~~ 57 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARS-------------------KQNLEKVHDEIMRSNKH 57 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESC-------------------HHHHHHHHHHHHHHCTT
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHHhccc
Confidence 35678899998 58999999999999998 78887742 23566667777776654
No 305
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=85.18 E-value=1.3 Score=47.21 Aligned_cols=36 Identities=14% Similarity=0.368 Sum_probs=29.9
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 11 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 47 (260)
T 2zat_A 11 PLENKVALVTASTDGIGLAIARRLAQDGA------HVVVSSRK 47 (260)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 35677888887 78999999999999997 78887643
No 306
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=85.14 E-value=1.8 Score=46.16 Aligned_cols=35 Identities=20% Similarity=0.455 Sum_probs=29.5
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~------~V~~~~r~ 42 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGA------SVYTCSRN 42 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5567899998 68999999999999997 78887743
No 307
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=85.11 E-value=0.8 Score=50.09 Aligned_cols=39 Identities=21% Similarity=0.362 Sum_probs=32.4
Q ss_pred HHHHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 505 LQKKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 505 ~q~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+||+++.++|-| .+|||-++++.|+..|. ++.++|.+
T Consensus 23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga------~V~i~~r~ 62 (273)
T 4fgs_A 23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGA------RVFITGRR 62 (273)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 44578888888888 67899999999999998 89998854
No 308
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=85.10 E-value=1.8 Score=47.65 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=29.3
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
..+|.|||+|.+|..++++|+..|. .++++|.+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~ 39 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGL-STWGADLN 39 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-eEEEEECC
Confidence 4689999999999999999999997 78888753
No 309
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=85.07 E-value=0.51 Score=53.31 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.3
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.||+|||+|..|+.++-.|++.|+ +++|+|.+
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~------~v~v~Er~ 33 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGI------KVTIYERN 33 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC------CEEEEecC
Confidence 4689999999999999999999999 89999865
No 310
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.06 E-value=1.2 Score=48.25 Aligned_cols=83 Identities=12% Similarity=0.199 Sum_probs=53.9
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
.|+++.++|-| ++|||-++++.|+..|. ++.++|.+ ..+.+.+++.+.+...
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga------~Vv~~~~~-------------------~~~~~~~~~~i~~~g~-- 56 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS------IVVAVELL-------------------EDRLNQIVQELRGMGK-- 56 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC-------------------HHHHHHHHHHHHHTTC--
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC------EEEEEECC-------------------HHHHHHHHHHHHhcCC--
Confidence 47888888887 78999999999999997 88888743 2355666666766553
Q ss_pred eEEEEecccCcccc--cccc--hhhhcCCCEEEEc
Q 001331 587 NIEALQNRVGPETE--NVFD--DTFWENITCVINA 617 (1099)
Q Consensus 587 ~i~~~~~~v~~~~e--~~~~--~~~~~~~DvVi~a 617 (1099)
++..+...+....+ ..++ .+-|...|++||.
T Consensus 57 ~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNN 91 (254)
T 4fn4_A 57 EVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNN 91 (254)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred cEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 45666666654321 1111 1224456666665
No 311
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=85.06 E-value=0.89 Score=50.22 Aligned_cols=35 Identities=11% Similarity=0.275 Sum_probs=31.2
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG~Gg-lG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.|.+++++|||.|+ +|..++..|+.+|. .+++++.
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~~~ 197 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENA------TVTIVHS 197 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEECT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------eEEEEeC
Confidence 47889999999998 79999999999998 7888864
No 312
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.02 E-value=1.4 Score=47.30 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=31.0
Q ss_pred HHhcCcEEEEcCC---cchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGSG---ALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~G---glG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|+++.++|-|++ |||-++++.|+..|. +++++|.+
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga------~Vvi~~r~ 41 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA------KLVFTYRK 41 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC------EEEEEECC
Confidence 3678899999974 899999999999998 88888753
No 313
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=85.01 E-value=3.1 Score=45.85 Aligned_cols=104 Identities=13% Similarity=0.245 Sum_probs=61.4
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh-CCCcEEEEEec
Q 001331 114 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLTS 191 (1099)
Q Consensus 114 ~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL-Np~V~v~~~~~ 191 (1099)
+.+|||.| .|++|..+++.|+..|. +|+++|...-. .....+.+.+. .+. +..+..
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~--~~~~~~ 62 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNS-------------------KREAIARIEKITGKT--PAFHET 62 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSS-------------------CTHHHHHHHHHHSCC--CEEECC
T ss_pred CcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcc-------------------hHHHHHHHHhhcCCC--ceEEEe
Confidence 46899998 58999999999999996 67777643211 01112223222 222 344444
Q ss_pred CCCh-----hhcc--CCcEEEEecCC-----------------HHHHHHHHHHHHhcCCCceeEEEeecceeE
Q 001331 192 KLTK-----EQLS--DFQAVVFTDIS-----------------LDKAIEFDDFCHNHQPAISFIKAEVRGLFG 240 (1099)
Q Consensus 192 ~l~~-----~~l~--~~dvVV~~~~~-----------------~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G 240 (1099)
++.+ ..+. +.|+||.+... ......+-+.|++.+. -.||.+++.+.+|
T Consensus 63 Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~iv~~SS~~~~g 134 (341)
T 3enk_A 63 DVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV-KRIVFSSSATVYG 134 (341)
T ss_dssp CTTCHHHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEEEGGGBC
T ss_pred ecCCHHHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC-CEEEEEecceEec
Confidence 5432 2333 67888865431 1122355567888771 2688877777665
No 314
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=84.98 E-value=3.3 Score=44.95 Aligned_cols=32 Identities=25% Similarity=0.364 Sum_probs=27.4
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 115 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 115 s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+|||.|+ |++|..+++.|...|. +|+++|..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGY-EVVVVDNL 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCC
Confidence 37999997 8999999999999996 78887753
No 315
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=84.98 E-value=2.5 Score=49.93 Aligned_cols=37 Identities=16% Similarity=0.354 Sum_probs=29.6
Q ss_pred HHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 507 KKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 507 ~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..+.+++|.|||+|.+|+.++.+|+..|. +++++|.+
T Consensus 11 ~~~~~~~IgvIGlG~MG~~lA~~La~~G~------~V~v~~r~ 47 (480)
T 2zyd_A 11 HHMSKQQIGVVGMAVMGRNLALNIESRGY------TVSIFNRS 47 (480)
T ss_dssp ----CBSEEEECCSHHHHHHHHHHHTTTC------CEEEECSS
T ss_pred cccCCCeEEEEccHHHHHHHHHHHHhCCC------eEEEEeCC
Confidence 45778899999999999999999999997 67887643
No 316
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=84.94 E-value=1.9 Score=46.30 Aligned_cols=82 Identities=15% Similarity=0.188 Sum_probs=52.9
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEE-EecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLT-ITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~-ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
.||.|+|||.+|..+++.+...+ +.|+ ++|.+.-. ..++
T Consensus 4 mkI~ViGaGrMG~~i~~~l~~~~------~eLva~~d~~~~~------------------------------~~gv---- 43 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAEEKG------HEIVGVIENTPKA------------------------------TTPY---- 43 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT------CEEEEEECSSCC--------------------------------CCS----
T ss_pred eEEEEECcCHHHHHHHHHHHhCC------CEEEEEEecCccc------------------------------cCCC----
Confidence 58999999999999999998765 2333 35543210 0111
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 646 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~ 646 (1099)
.+..+. +++. ++|+||+++..-.+...+. .+.++|+| .||.|+
T Consensus 44 ---~v~~dl-----~~l~-~~DVvIDft~p~a~~~~~~---l~~g~~vV-igTTG~ 86 (243)
T 3qy9_A 44 ---QQYQHI-----ADVK-GADVAIDFSNPNLLFPLLD---EDFHLPLV-VATTGE 86 (243)
T ss_dssp ---CBCSCT-----TTCT-TCSEEEECSCHHHHHHHHT---SCCCCCEE-ECCCSS
T ss_pred ---ceeCCH-----HHHh-CCCEEEEeCChHHHHHHHH---HhcCCceE-eCCCCC
Confidence 111111 2334 8999999986555555554 78999999 577776
No 317
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=84.93 E-value=1.6 Score=47.08 Aligned_cols=35 Identities=29% Similarity=0.478 Sum_probs=29.3
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~------~V~~~~~ 63 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA------AVALTYV 63 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 36678899998 68999999999999998 7777753
No 318
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=84.90 E-value=1.3 Score=53.30 Aligned_cols=87 Identities=13% Similarity=0.235 Sum_probs=64.5
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
.+|+|+|+|-+|..+++.|...|. .++++|.|.-....+. ..+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~------~v~vid~d~~~~~~~~-------------------------------~~i 391 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPV------PFILIDRQESPVCNDH-------------------------------VVV 391 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC------CEEEEESSCCSSCCSS-------------------------------CEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC------CEEEEECChHHHhhcC-------------------------------CEE
Confidence 799999999999999999999998 8999998753222211 122
Q ss_pred ecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhccccccc
Q 001331 592 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKP 637 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~P 637 (1099)
....+. +..+...-.+++|.+|.++++.++...+...+++.+.+
T Consensus 392 ~gD~t~--~~~L~~agi~~ad~vi~~~~~d~~ni~~~~~ak~l~~~ 435 (565)
T 4gx0_A 392 YGDATV--GQTLRQAGIDRASGIIVTTNDDSTNIFLTLACRHLHSH 435 (565)
T ss_dssp ESCSSS--STHHHHHTTTSCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred EeCCCC--HHHHHhcCccccCEEEEECCCchHHHHHHHHHHHHCCC
Confidence 222222 23343445689999999999999999888888887654
No 319
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=84.89 E-value=2.2 Score=48.21 Aligned_cols=37 Identities=22% Similarity=0.342 Sum_probs=32.3
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
.|.+++|.|||.|.+|..+++.|...|+ +++.+|...
T Consensus 145 ~l~gktvgIiGlG~IG~~vA~~l~~~G~------~V~~~d~~~ 181 (343)
T 2yq5_A 145 EIYNLTVGLIGVGHIGSAVAEIFSAMGA------KVIAYDVAY 181 (343)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC------EEEEECSSC
T ss_pred ccCCCeEEEEecCHHHHHHHHHHhhCCC------EEEEECCCh
Confidence 3667899999999999999999999998 888888643
No 320
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=84.78 E-value=2.9 Score=46.30 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=29.2
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.||.|||+|.+|..++..|+..|. ..++++|-|
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~-----~~v~L~Di~ 35 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKEL-----GDIVLLDIV 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-----CeEEEEeCC
Confidence 589999999999999999999996 359999854
No 321
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=84.76 E-value=1.6 Score=49.34 Aligned_cols=93 Identities=16% Similarity=0.142 Sum_probs=61.4
Q ss_pred CcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 512 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
.||.||| .|.+|.|+++.|...-. -+|..+. ..+..|+. +.+..|..+
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~-----~el~~l~---------------S~~~aG~~--------~~~~~p~~~--- 62 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPE-----AKITYLS---------------SRTYAGKK--------LEEIFPSTL--- 62 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTT-----EEEEEEE---------------CSTTTTSB--------HHHHCGGGC---
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCC-----cEEEEEe---------------CcccccCC--------hHHhChhhc---
Confidence 4799998 69999999999997754 5555542 33455654 333345443
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcC
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESG 642 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sg 642 (1099)
....+.+.+ .+++++++|+||-|+..-.++.++... .+..+||.+
T Consensus 63 ~~l~~~~~~----~~~~~~~~Dvvf~alp~~~s~~~~~~~---~g~~VIDlS 107 (351)
T 1vkn_A 63 ENSILSEFD----PEKVSKNCDVLFTALPAGASYDLVREL---KGVKIIDLG 107 (351)
T ss_dssp CCCBCBCCC----HHHHHHHCSEEEECCSTTHHHHHHTTC---CSCEEEESS
T ss_pred cCceEEeCC----HHHhhcCCCEEEECCCcHHHHHHHHHh---CCCEEEECC
Confidence 111111111 134568899999999999999998877 577777644
No 322
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.75 E-value=2.3 Score=45.34 Aligned_cols=34 Identities=29% Similarity=0.516 Sum_probs=29.5
Q ss_pred hhcCeEEEEcC-C-hHHHHHHHHHHHhCCCeEEEEeC
Q 001331 112 LFASNILVSGM-Q-GLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 112 L~~s~VlIiG~-g-glG~EiaKnLvlaGVg~itlvD~ 146 (1099)
|++++|+|.|. | |+|.++++.|+..|. ++.++|.
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r 55 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDY 55 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecC
Confidence 56789999998 6 899999999999997 5778775
No 323
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=84.75 E-value=0.54 Score=53.73 Aligned_cols=37 Identities=32% Similarity=0.519 Sum_probs=34.7
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+|...||+|+|+|+.|..+++.|+.+|+ ++|+++|.+
T Consensus 189 ~l~~~kVVv~GAGaAG~~iAkll~~~G~-----~~I~v~Dr~ 225 (388)
T 1vl6_A 189 KIEEVKVVVNGIGAAGYNIVKFLLDLGV-----KNVVAVDRK 225 (388)
T ss_dssp CTTTCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETT
T ss_pred CCCCcEEEEECCCHHHHHHHHHHHhCCC-----CeEEEEECC
Confidence 5778899999999999999999999999 899999976
No 324
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=84.75 E-value=4.8 Score=44.70 Aligned_cols=37 Identities=16% Similarity=0.045 Sum_probs=31.5
Q ss_pred HHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 110 RRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 110 ~kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
..|.+.+|||.| .|++|..+++.|...|. +|++++..
T Consensus 5 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 42 (357)
T 1rkx_A 5 SFWQGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLT 42 (357)
T ss_dssp HHHTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred hhhCCCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCC
Confidence 356778999999 59999999999999996 78888764
No 325
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=84.74 E-value=1 Score=49.32 Aligned_cols=34 Identities=18% Similarity=0.368 Sum_probs=30.3
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHcCCCCCCCccEEEec
Q 001331 508 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 508 ~L~~~~v~vvG~Gg-lG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
.|.+++++|||.|+ +|..++..|+..|. .+++++
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gA------tVtv~h 191 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGA------TVSVCH 191 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC------eEEEEe
Confidence 36788999999988 79999999999998 788886
No 326
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=84.71 E-value=1.2 Score=48.00 Aligned_cols=36 Identities=22% Similarity=0.584 Sum_probs=30.1
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 53 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGA------RLVLSGRD 53 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 35677888888 68999999999999998 78888753
No 327
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=84.71 E-value=1.2 Score=47.89 Aligned_cols=34 Identities=29% Similarity=0.372 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
|.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~------~V~~~~r 43 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESV------NLVLHYH 43 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSC------EEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEec
Confidence 5667888988 68999999999999998 7777753
No 328
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=84.59 E-value=3.5 Score=46.48 Aligned_cols=33 Identities=24% Similarity=0.226 Sum_probs=28.5
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 114 ASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 114 ~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
..+|||.|+ |++|..+++.|...|. +|+++|..
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWK 62 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECC
Confidence 368999997 8999999999999995 78888764
No 329
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=84.57 E-value=0.88 Score=49.04 Aligned_cols=35 Identities=34% Similarity=0.536 Sum_probs=29.2
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
++.+++|+|.| .||||.++++.|+..|. ++++++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~------~V~~~~r 61 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGL------KVWINYR 61 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 35677888888 68999999999999998 7777764
No 330
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=84.56 E-value=1.3 Score=51.04 Aligned_cols=112 Identities=14% Similarity=0.085 Sum_probs=64.6
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCC-----
Q 001331 511 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP----- 584 (1099)
Q Consensus 511 ~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np----- 584 (1099)
.++|+|.|+ |+||.++++.|+..|. ++++++...- .....+.+.+.+....+
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~R~~~----------------~~~~~~~l~~~l~~~~~~~~~~ 126 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSH------RIYCFIRADN----------------EEIAWYKLMTNLNDYFSEETVE 126 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEE------EEEEEEECSS----------------HHHHHHHHHHHHHHHSCHHHHH
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCC------EEEEEECCCC----------------hHHHHHHHHHHHHHhccccccc
Confidence 348999995 9999999999987775 6777653211 00112222333332221
Q ss_pred --CCeEEEEecccCcccccccchhhhcCCCEEEEccC--------------chHHHHHHHhhcccccccEEEcCcCcccc
Q 001331 585 --RLNIEALQNRVGPETENVFDDTFWENITCVINALD--------------NVNARLYVDQRCLYFQKPLLESGTLGAKC 648 (1099)
Q Consensus 585 --~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD--------------n~~ar~~i~~~c~~~~~Pli~sgt~G~~G 648 (1099)
.-+++.+...+.... . +. .+.++|+||++.- |+..-..+-+.|....+.+|..++.+. |
T Consensus 127 ~~~~~v~~v~~Dl~d~~-~-l~--~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~-G 201 (427)
T 4f6c_A 127 MMLSNIEVIVGDFECMD-D-VV--LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISV-G 201 (427)
T ss_dssp HHHTTEEEEEECC---C-C-CC--CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGG-G
T ss_pred cccCceEEEeCCCCCcc-c-CC--CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHh-C
Confidence 135666666665421 1 22 4678999999864 333335566667666677777666655 4
Q ss_pred e
Q 001331 649 N 649 (1099)
Q Consensus 649 ~ 649 (1099)
.
T Consensus 202 ~ 202 (427)
T 4f6c_A 202 T 202 (427)
T ss_dssp S
T ss_pred C
Confidence 4
No 331
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=84.51 E-value=1.6 Score=46.26 Aligned_cols=35 Identities=29% Similarity=0.307 Sum_probs=29.5
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.+.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~------~V~~~~r 39 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKA------KVVVNYR 39 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEEcC
Confidence 36677888887 78999999999999997 7888764
No 332
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=84.51 E-value=2.4 Score=45.27 Aligned_cols=29 Identities=21% Similarity=0.212 Sum_probs=25.8
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEe
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHD 145 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD 145 (1099)
+|.|||+|.+|..++++|...|. .++++|
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~-~V~~~~ 30 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSL 30 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECC
T ss_pred eEEEEechHHHHHHHHHHHHCCC-eEEEeC
Confidence 79999999999999999999997 677654
No 333
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.48 E-value=3 Score=44.84 Aligned_cols=63 Identities=21% Similarity=0.236 Sum_probs=42.8
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEE
Q 001331 111 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 189 (1099)
Q Consensus 111 kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~ 189 (1099)
.|.+++|+|.| .||+|.++++.|+..|. +|.+++.+. .+.+.+.+.+++......+...
T Consensus 29 ~l~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 88 (279)
T 1xg5_A 29 RWRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTV-------------------GNIEELAAECKSAGYPGTLIPY 88 (279)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCH-------------------HHHHHHHHHHHHTTCSSEEEEE
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCh-------------------HHHHHHHHHHHhcCCCceEEEE
Confidence 46778999997 68999999999999997 677776431 2444555566555443445544
Q ss_pred ecCC
Q 001331 190 TSKL 193 (1099)
Q Consensus 190 ~~~l 193 (1099)
..++
T Consensus 89 ~~Dl 92 (279)
T 1xg5_A 89 RCDL 92 (279)
T ss_dssp ECCT
T ss_pred EecC
Confidence 4444
No 334
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=84.48 E-value=1.1 Score=49.84 Aligned_cols=32 Identities=28% Similarity=0.337 Sum_probs=29.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+|+|+|+|++|+.++..|..+|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGH-CVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTC-EEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCC
Confidence 589999999999999999999995 89998864
No 335
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=84.46 E-value=2.2 Score=47.50 Aligned_cols=37 Identities=27% Similarity=0.513 Sum_probs=31.3
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
....||.|||+|.+|..++..|+..|.. ..|.++|-|
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~----~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIV----DELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSC----SEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 3457999999999999999999998873 579998854
No 336
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=84.45 E-value=1.9 Score=45.67 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~r 39 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA------AVAIAAR 39 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 5667899998 78999999999999997 7888764
No 337
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=84.40 E-value=1.6 Score=48.23 Aligned_cols=31 Identities=32% Similarity=0.549 Sum_probs=26.8
Q ss_pred CcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 512 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
++|+|.| .|.||..+++.|+..|. +++++|.
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~------~V~~~~r 33 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI------DLIVFDN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC------EEEEEEC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC------EEEEEeC
Confidence 4799999 69999999999999987 7888764
No 338
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=84.40 E-value=1.1 Score=49.59 Aligned_cols=32 Identities=22% Similarity=0.173 Sum_probs=28.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+|+|+|+|++|+.++..|..+|. .+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~-~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE-DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC-CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEEcC
Confidence 589999999999999999999996 78888754
No 339
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.37 E-value=1.3 Score=46.86 Aligned_cols=34 Identities=24% Similarity=0.391 Sum_probs=28.9
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~------~V~~~~r 43 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGA------SVVVSDI 43 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTC------EEEEEES
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC------EEEEEcC
Confidence 5667889998 58999999999999997 7888763
No 340
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=84.37 E-value=0.78 Score=50.36 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=29.8
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHcCCCCCCCccEEEec
Q 001331 508 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 508 ~L~~~~v~vvG~Gg-lG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
.+.+++|+|||.|. +|..+++.|+..|. ++++++
T Consensus 156 ~l~gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 190 (288)
T 1b0a_A 156 DTFGLNAVVIGASNIVGRPMSMELLLAGC------TTTVTH 190 (288)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTC------EEEEEC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHCCC------eEEEEe
Confidence 35678999999997 69999999999986 888885
No 341
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=84.35 E-value=0.99 Score=50.16 Aligned_cols=36 Identities=8% Similarity=-0.016 Sum_probs=31.8
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHh-CCCeEEEEeC
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDE 146 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvla-GVg~itlvD~ 146 (1099)
+....+|.|||+|..|..++++|... |+.+++++|.
T Consensus 132 ~~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr 168 (312)
T 2i99_A 132 PPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 168 (312)
T ss_dssp CTTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECS
T ss_pred CCCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 34567999999999999999999988 9889999884
No 342
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=84.34 E-value=1.5 Score=47.48 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=30.3
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~------~V~~~~r~ 60 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGC------HTVIASRS 60 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEESC
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46778899998 57899999999999997 78887743
No 343
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=84.33 E-value=1.3 Score=49.31 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=48.4
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCC---CcEEEEE
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN---AVVLSTL 189 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp---~V~v~~~ 189 (1099)
..+|.|+|+|.+|..++-.|+..|. ++|.|+|-+. .|++.....|....| .+++..
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~-------------------~~~~g~~~dl~~~~~~~~~~~i~~- 66 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK-------------------EKAIGEAMDINHGLPFMGQMSLYA- 66 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC----------------------CCHHHHHHTTSCCCTTCEEEC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh-------------------HHHHHHHHHHHHhHHhcCCeEEEE-
Confidence 4689999999999999999999885 6899999642 122222233333222 344443
Q ss_pred ecCCChhhccCCcEEEEecC
Q 001331 190 TSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 190 ~~~l~~~~l~~~dvVV~~~~ 209 (1099)
. +.+-+.+.|+||++..
T Consensus 67 -~--~~~a~~~aDvVii~~g 83 (318)
T 1y6j_A 67 -G--DYSDVKDCDVIVVTAG 83 (318)
T ss_dssp ----CGGGGTTCSEEEECCC
T ss_pred -C--CHHHhCCCCEEEEcCC
Confidence 2 2455889999999865
No 344
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=84.32 E-value=1.5 Score=51.79 Aligned_cols=118 Identities=13% Similarity=0.118 Sum_probs=65.6
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh-CCCcEEEEEecC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLTSK 192 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL-Np~V~v~~~~~~ 192 (1099)
..+|.|||+|.+|..+|++|+..|. .|+++|.+.-....+...-... ..+ .-+....+.++.+ .+++-+...+..
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~g-~~i--~~~~s~~e~v~~l~~aDvVil~Vp~~ 79 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKG-TKV--VGAQSLKEMVSKLKKPRRIILLVKAG 79 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTT-SSC--EECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcccCC-Cce--eccCCHHHHHhhccCCCEEEEecCCh
Confidence 4689999999999999999999997 7999987543222221110000 000 0000111122222 345444444332
Q ss_pred -CCh-------hhccCCcEEEEecC-CHHHHHHHHHHHHhcCCCceeEEEeecc
Q 001331 193 -LTK-------EQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRG 237 (1099)
Q Consensus 193 -l~~-------~~l~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ipfI~~~~~G 237 (1099)
..+ ..+..-++||++.- ......++.+.+.+.+ +.|+.+.+.|
T Consensus 80 ~~v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~G--i~fvd~pVsG 131 (484)
T 4gwg_A 80 QAVDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKG--ILFVGSGVSG 131 (484)
T ss_dssp HHHHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTT--CEEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhc--cccccCCccC
Confidence 111 13445577777654 4445556667777788 8888766554
No 345
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=84.31 E-value=2.9 Score=46.90 Aligned_cols=73 Identities=15% Similarity=0.155 Sum_probs=48.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHH----HhCCCcEEEEEe
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQ----ELNNAVVLSTLT 190 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~----eLNp~V~v~~~~ 190 (1099)
.+|.|+|+|.+|..+|..|+..|...++|+|.+. .+++.....+. .+....++....
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~-------------------~~~~~~~~~l~~~~~~~~~~~~i~~t~ 70 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK-------------------GMPEGKALDLSHVTSVVDTNVSVRAEY 70 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS-------------------SHHHHHHHHHHHHHHHTTCCCCEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh-------------------hHHHHHHHHHHhhhhccCCCCEEEEeC
Confidence 5899999999999999999999985599998642 13333222222 222333444432
Q ss_pred cCCChhhccCCcEEEEec
Q 001331 191 SKLTKEQLSDFQAVVFTD 208 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~ 208 (1099)
++. +-+.+.|+||.+.
T Consensus 71 -d~~-ea~~~aDiVi~a~ 86 (331)
T 1pzg_A 71 -SYE-AALTGADCVIVTA 86 (331)
T ss_dssp -SHH-HHHTTCSEEEECC
T ss_pred -CHH-HHhCCCCEEEEcc
Confidence 222 2578999999886
No 346
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=84.28 E-value=2.8 Score=44.92 Aligned_cols=62 Identities=21% Similarity=0.255 Sum_probs=44.5
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEe
Q 001331 112 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLT 190 (1099)
Q Consensus 112 L~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~ 190 (1099)
|.++.|+|.| .+|+|.++++.|+..|. +|.++|.+ ..+.+.+.+.+.+..+..++..+.
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~ 65 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARD-------------------GERLRAAESALRQRFPGARLFASV 65 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCC-------------------HHHHHHHHHHHHHhcCCceEEEEe
Confidence 5678899997 57999999999999998 58887742 235666667777666654455444
Q ss_pred cCC
Q 001331 191 SKL 193 (1099)
Q Consensus 191 ~~l 193 (1099)
.++
T Consensus 66 ~Dv 68 (265)
T 3lf2_A 66 CDV 68 (265)
T ss_dssp CCT
T ss_pred CCC
Confidence 433
No 347
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=84.28 E-value=1.1 Score=48.38 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=29.2
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.|.++.++|.| .||||.++++.|+..|. +++++|.
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r 60 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGA------MVIGTAT 60 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 46677788887 68999999999999998 7888764
No 348
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=84.25 E-value=1.2 Score=47.37 Aligned_cols=64 Identities=16% Similarity=0.197 Sum_probs=44.5
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHH---cCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVAL---MGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP 584 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~---~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np 584 (1099)
|.+++++|.| .||||.++++.|+. .|. +++++|.+. .+.+.+++.+...+|
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~------~V~~~~r~~-------------------~~~~~~~~~l~~~~~ 58 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS------VMLVSARSE-------------------SMLRQLKEELGAQQP 58 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC------EEEEEESCH-------------------HHHHHHHHHHHHHCT
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC------eEEEEeCCH-------------------HHHHHHHHHHHhhCC
Confidence 4556777777 78999999999999 787 788876432 234445556666666
Q ss_pred CCeEEEEecccCc
Q 001331 585 RLNIEALQNRVGP 597 (1099)
Q Consensus 585 ~~~i~~~~~~v~~ 597 (1099)
..++..+...+..
T Consensus 59 ~~~~~~~~~Dv~~ 71 (259)
T 1oaa_A 59 DLKVVLAAADLGT 71 (259)
T ss_dssp TSEEEEEECCTTS
T ss_pred CCeEEEEecCCCC
Confidence 6667766666554
No 349
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=84.19 E-value=1.2 Score=49.69 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=28.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCC---CeEEEEeC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGV---KSVTLHDE 146 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGV---g~itlvD~ 146 (1099)
..+|.|||+|.+|..++.+|..+|+ ..|+++|.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r 57 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSP 57 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECC
Confidence 3589999999999999999999995 57888774
No 350
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=84.18 E-value=1.5 Score=48.53 Aligned_cols=31 Identities=23% Similarity=0.078 Sum_probs=27.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
..+|+|+|+|++|+.++..|. +|. .|++++.
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~-~V~~~~r 32 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYH-DVTVVTR 32 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCC-ceEEEEC
Confidence 368999999999999999999 884 7888874
No 351
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=84.17 E-value=1.5 Score=44.84 Aligned_cols=92 Identities=14% Similarity=0.094 Sum_probs=58.2
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC
Q 001331 116 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 194 (1099)
Q Consensus 116 ~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~ 194 (1099)
+|+|.|+ |++|..+++.|+..|. +|++++.+. .+ +.++.+.+. ....+++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~-------------------~~-------~~~~~~~~~--~~~~D~~ 52 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNA-------------------GK-------ITQTHKDIN--ILQKDIF 52 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCS-------------------HH-------HHHHCSSSE--EEECCGG
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCc-------------------hh-------hhhccCCCe--EEecccc
Confidence 6999995 8999999999999994 788877532 11 112224443 3333432
Q ss_pred h---hhccCCcEEEEecCC--------HHHHHHHHHHHHhcCCCceeEEEeecc
Q 001331 195 K---EQLSDFQAVVFTDIS--------LDKAIEFDDFCHNHQPAISFIKAEVRG 237 (1099)
Q Consensus 195 ~---~~l~~~dvVV~~~~~--------~~~~~~ln~~c~~~~~~ipfI~~~~~G 237 (1099)
+ +.+.++|+||.+... ......+-+.|++.+. ..+|..++.+
T Consensus 53 d~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~l~~a~~~~~~-~~~v~~SS~~ 105 (221)
T 3ew7_A 53 DLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVS-PRLLVVGGAA 105 (221)
T ss_dssp GCCHHHHTTCSEEEECCCSSTTTTTSHHHHHHHHHHHHCSCCS-SEEEEECCCC
T ss_pred ChhhhhhcCCCEEEECCcCCccccchHHHHHHHHHHHHHhcCC-ceEEEEecce
Confidence 2 467789999987532 2333566677877742 4566655543
No 352
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=84.10 E-value=2.2 Score=47.55 Aligned_cols=73 Identities=16% Similarity=0.015 Sum_probs=53.6
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 113 FASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvla-GVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
...+|+|||+|+.|..++++|... ++.+++++|.+ ..|++..++++.... +.+. . .
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~~-~-~ 180 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISAS-V-Q 180 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSS-------------------HHHHHHHHHHHHHTT--CCEE-E-C
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCC-------------------HHHHHHHHHHHHhcC--ceEE-E-C
Confidence 467999999999999999999874 78999998752 237777777776532 3333 2 2
Q ss_pred CCChhhccCCcEEEEecCC
Q 001331 192 KLTKEQLSDFQAVVFTDIS 210 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~~~ 210 (1099)
++ ++.+ ++|+||.|+.+
T Consensus 181 ~~-~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 181 PA-EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp CH-HHHT-SSSEEEECCCC
T ss_pred CH-HHHh-CCCEEEEeeCC
Confidence 22 3456 89999999865
No 353
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=84.08 E-value=1.1 Score=48.88 Aligned_cols=35 Identities=17% Similarity=0.209 Sum_probs=29.0
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.+.++.++|.| .||||.++++.|+..|. +++++|.
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r 60 (283)
T 3v8b_A 25 NQPSPVALITGAGSGIGRATALALAADGV------TVGALGR 60 (283)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 46778889998 68999999999999998 7888874
No 354
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=84.06 E-value=0.63 Score=50.79 Aligned_cols=32 Identities=13% Similarity=0.316 Sum_probs=28.8
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+++++|+|+||.|..++..|+..|. +|+|++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~------~v~V~nR 149 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGL------QVSVLNR 149 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC------EEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 7899999999999999999999995 7888753
No 355
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=84.05 E-value=0.92 Score=49.57 Aligned_cols=32 Identities=19% Similarity=0.215 Sum_probs=27.5
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 511 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 511 ~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+++|+|.|+ |.||..+++.|+..|. +++++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNW------HAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTC------EEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC------eEEEEcc
Confidence 468999996 9999999999999986 7888874
No 356
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=84.04 E-value=1.9 Score=45.00 Aligned_cols=82 Identities=13% Similarity=0.117 Sum_probs=48.7
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 511 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
.++++|.| .||||.++++.|+..|. +++++|.+. .+.+.+++.+.+.. ..++.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~------~V~~~~r~~-------------------~~~~~~~~~~~~~~-~~~~~ 55 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY------ALALGARSV-------------------DRLEKIAHELMQEQ-GVEVF 55 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC------EEEEEESCH-------------------HHHHHHHHHHHHHH-CCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeCCH-------------------HHHHHHHHHHHhhc-CCeEE
Confidence 35688888 68899999999999998 688876432 23444444444222 24566
Q ss_pred EEecccCcccc--cccc--hhhhcCCCEEEEcc
Q 001331 590 ALQNRVGPETE--NVFD--DTFWENITCVINAL 618 (1099)
Q Consensus 590 ~~~~~v~~~~e--~~~~--~~~~~~~DvVi~al 618 (1099)
.+...+..... ..+. .+-+...|++|++.
T Consensus 56 ~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~A 88 (235)
T 3l77_A 56 YHHLDVSKAESVEEFSKKVLERFGDVDVVVANA 88 (235)
T ss_dssp EEECCTTCHHHHHHHCC-HHHHHSSCSEEEECC
T ss_pred EEEeccCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 66666654221 1111 01123677777663
No 357
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=83.92 E-value=0.99 Score=51.38 Aligned_cols=35 Identities=23% Similarity=0.312 Sum_probs=32.3
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
.+...+|+|+|+|++|..+++.+...|. +++++|.
T Consensus 163 ~l~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~ 197 (369)
T 2eez_A 163 GVAPASVVILGGGTVGTNAAKIALGMGA-QVTILDV 197 (369)
T ss_dssp BBCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEEC
Confidence 4778999999999999999999999998 8999885
No 358
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=83.88 E-value=1.8 Score=47.92 Aligned_cols=38 Identities=18% Similarity=0.252 Sum_probs=32.5
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCcc
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTV 149 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V 149 (1099)
...-.+|.|||+|.+|..+|++|+..|. .++++|.+.-
T Consensus 18 ~~~m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~ 55 (310)
T 3doj_A 18 GSHMMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLS 55 (310)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGG
T ss_pred cccCCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHH
Confidence 3344689999999999999999999997 8999987653
No 359
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=83.86 E-value=0.83 Score=46.82 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=29.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
...|+|||+|..|..+|..|.+.|+ +++|+|..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~ 34 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKS 34 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECC
Confidence 3569999999999999999999999 79999963
No 360
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=83.82 E-value=0.75 Score=50.96 Aligned_cols=32 Identities=25% Similarity=0.313 Sum_probs=28.1
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.||+|||+|++|+.++..|++.|. .++++|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGE------DVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSC------CEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC------eEEEEEcC
Confidence 589999999999999999999996 78888754
No 361
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=83.77 E-value=1.6 Score=45.94 Aligned_cols=35 Identities=26% Similarity=0.406 Sum_probs=29.4
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~------~V~~~~r~ 40 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGA------KVGLHGRK 40 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC------EEEEECCC
Confidence 5677888887 68999999999999997 78887643
No 362
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=83.72 E-value=1.6 Score=46.51 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=29.1
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..+|.|||+|.+|+.+++.|+..|.. +...++++|.+
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~--~~~~v~~~~~~ 40 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANII--KKENLFYYGPS 40 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSS--CGGGEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCC--CCCeEEEEeCC
Confidence 35899999999999999999999831 00268888754
No 363
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=83.69 E-value=2.6 Score=43.40 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=27.3
Q ss_pred eEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 116 NILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 116 ~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
+|+|+| +|.+|..+++.|...|. +++++|.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~-~V~~~~r 32 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSR 32 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 799999 99999999999999996 7888875
No 364
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=83.69 E-value=1.2 Score=48.72 Aligned_cols=34 Identities=21% Similarity=0.214 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHcCCCCCCCccEEEec
Q 001331 508 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 508 ~L~~~~v~vvG~Gg-lG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
.|.+++++|||.|+ +|..++..|..+|. .+++++
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gA------tVtv~h 192 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKA------TVTTCH 192 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC------eEEEEe
Confidence 47889999999998 79999999999998 788874
No 365
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=83.68 E-value=1.7 Score=47.30 Aligned_cols=35 Identities=17% Similarity=0.384 Sum_probs=29.9
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.|.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 15 ~l~~k~vlVTGasggIG~~la~~l~~~G~------~V~~~~r 50 (303)
T 1yxm_A 15 LLQGQVAIVTGGATGIGKAIVKELLELGS------NVVIASR 50 (303)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 46678899998 68999999999999997 7888764
No 366
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=83.67 E-value=1.5 Score=47.90 Aligned_cols=98 Identities=17% Similarity=0.170 Sum_probs=59.5
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHc-CCCCCCCccE-EEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 511 DAKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKL-TITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~~-Gv~~~~~g~i-~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
..||.|+| +|.+|.++++.+... ++ .| -++|...- .. .-.|+|.- + .+.+++.
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~------eLv~~~d~~~~---~~------~G~d~gel----~-----g~~~gv~ 62 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDA------TLVGALDRTGS---PQ------LGQDAGAF----L-----GKQTGVA 62 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTE------EEEEEBCCTTC---TT------TTSBTTTT----T-----TCCCSCB
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCC------EEEEEEEecCc---cc------ccccHHHH----h-----CCCCCce
Confidence 35899999 899999999998865 33 33 33453310 00 01233311 1 1111211
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcc
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 646 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~ 646 (1099)
+..+. ++.+..+|+||+++ .+.+-...-..|.++++|+| .||.|+
T Consensus 63 -------v~~dl-----~~ll~~~DVVIDfT-~p~a~~~~~~~al~~G~~vV-igTTG~ 107 (272)
T 4f3y_A 63 -------LTDDI-----ERVCAEADYLIDFT-LPEGTLVHLDAALRHDVKLV-IGTTGF 107 (272)
T ss_dssp -------CBCCH-----HHHHHHCSEEEECS-CHHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred -------ecCCH-----HHHhcCCCEEEEcC-CHHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 11111 34456899999998 56665666778999999999 577775
No 367
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=83.66 E-value=2.7 Score=46.57 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=26.5
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEE
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLH 144 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlv 144 (1099)
...+|+|+|+|++|+.+|..|..+|. .++++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~ 48 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGH-EVILI 48 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTC-EEEEE
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCC-eEEEE
Confidence 45789999999999999999999996 67776
No 368
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=83.64 E-value=2.6 Score=47.24 Aligned_cols=34 Identities=32% Similarity=0.614 Sum_probs=29.6
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
..||.|||+|.+|..++-.|+..|.. ..|.++|-
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~----~el~L~Di 42 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIA----QEIGIVDI 42 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCC----SEEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCC----CEEEEEeC
Confidence 35899999999999999999999973 67888874
No 369
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=83.58 E-value=2.1 Score=47.58 Aligned_cols=73 Identities=27% Similarity=0.278 Sum_probs=49.5
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhC---CCCeE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSIN---PRLNI 588 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~n---p~~~i 588 (1099)
.||.|||+|.+|..++-.|+..|.. +.|.++|-| ..|++..+..+.... ..+++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~k~~g~a~dl~~~~~~~~~~~v 57 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVA----REVVLVDLD-------------------RKLAQAHAEDILHATPFAHPVWV 57 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS-------------------HHHHHHHHHHHHTTGGGSCCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC-------------------hhHHHHHHHHHHHhHhhcCCeEE
Confidence 4799999999999999999999873 689999843 234443344444432 34555
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccC
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALD 619 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD 619 (1099)
++ ++ .+-+++.|+||.+..
T Consensus 58 ~~-----~~-------~~a~~~aD~Vii~ag 76 (310)
T 2xxj_A 58 WA-----GS-------YGDLEGARAVVLAAG 76 (310)
T ss_dssp EE-----CC-------GGGGTTEEEEEECCC
T ss_pred EE-----CC-------HHHhCCCCEEEECCC
Confidence 53 11 123689999998853
No 370
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=83.51 E-value=2.5 Score=49.76 Aligned_cols=32 Identities=28% Similarity=0.402 Sum_probs=28.5
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
..+|.|||+|.+|..+|.+|+..|. .|+++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~-~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY-TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC-CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC-EEEEEcC
Confidence 4689999999999999999999997 6888774
No 371
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=83.50 E-value=3.5 Score=44.70 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=28.5
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGV-KSVTLHDE 146 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~ 146 (1099)
...+|.|||+|.+|..+++.|...|. ..|+++|.
T Consensus 5 ~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~ 39 (290)
T 3b1f_A 5 EEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNR 39 (290)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred ccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcC
Confidence 34689999999999999999999964 36777774
No 372
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=83.46 E-value=4.1 Score=45.38 Aligned_cols=87 Identities=17% Similarity=0.179 Sum_probs=56.8
Q ss_pred CeEEEEcCChHHHH-HHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 115 SNILVSGMQGLGAE-IAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 115 s~VlIiG~gglG~E-iaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
++|.++|+||.|.. +|+.|...|. .|++.|...-. + ..+.|++. .+.+.. + .
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~-~V~~~D~~~~~-----------------~----~~~~L~~~--gi~v~~--g-~ 57 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGF-EVSGCDAKMYP-----------------P----MSTQLEAL--GIDVYE--G-F 57 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTC-EEEEEESSCCT-----------------T----HHHHHHHT--TCEEEE--S-C
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCC-EEEEEcCCCCc-----------------H----HHHHHHhC--CCEEEC--C-C
Confidence 68999999999996 9999999997 78998864310 0 23456555 455542 2 2
Q ss_pred Chhhc--cCCcEEEEecC-CHHHHHHHHHHHHhcCCCceeEE
Q 001331 194 TKEQL--SDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIK 232 (1099)
Q Consensus 194 ~~~~l--~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ipfI~ 232 (1099)
+++.+ .++|+||.+.. +.. . -.-..+++.| +|++.
T Consensus 58 ~~~~l~~~~~d~vV~Spgi~~~-~-p~~~~a~~~g--i~v~~ 95 (326)
T 3eag_A 58 DAAQLDEFKADVYVIGNVAKRG-M-DVVEAILNLG--LPYIS 95 (326)
T ss_dssp CGGGGGSCCCSEEEECTTCCTT-C-HHHHHHHHTT--CCEEE
T ss_pred CHHHcCCCCCCEEEECCCcCCC-C-HHHHHHHHcC--CcEEe
Confidence 33344 47999998754 222 1 1223568888 88774
No 373
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=83.39 E-value=3.7 Score=43.86 Aligned_cols=35 Identities=31% Similarity=0.484 Sum_probs=29.4
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 111 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 111 kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
.|.+++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r 45 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDV 45 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 36678899997 67999999999999997 6777764
No 374
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=83.39 E-value=1.1 Score=47.99 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=23.8
Q ss_pred HHHHhcCcEEEEc-CCcchHHHHHHHHHcCC
Q 001331 506 QKKLEDAKVFIVG-SGALGCEFLKNVALMGV 535 (1099)
Q Consensus 506 q~~L~~~~v~vvG-~GglG~evlk~La~~Gv 535 (1099)
+..+.+++|+|.| .||||.++++.|+..|.
T Consensus 21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~ 51 (267)
T 4iiu_A 21 QSNAMSRSVLVTGASKGIGRAIARQLAADGF 51 (267)
T ss_dssp ----CCCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCC
Confidence 4457778889988 68999999999999998
No 375
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=83.33 E-value=0.68 Score=53.03 Aligned_cols=39 Identities=23% Similarity=0.446 Sum_probs=35.6
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCcc
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVI 551 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~I 551 (1099)
+|...||+|+|+|+.|..+++.|..+|+ .+|+++|.+-+
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~~Ga-----~~I~v~D~~Gl 223 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLAAGA-----TKVTVVDKFGI 223 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEEETTEE
T ss_pred CCCccEEEEECCCHHHHHHHHHHHHcCC-----CeEEEEECCCc
Confidence 5677899999999999999999999999 89999998753
No 376
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=83.32 E-value=3.2 Score=43.88 Aligned_cols=35 Identities=20% Similarity=0.488 Sum_probs=30.3
Q ss_pred hhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 112 LFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 112 L~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
|++++|+|.| .||+|.++++.|+..|...+.++|.
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEES
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEec
Confidence 5678899997 6799999999999999877888874
No 377
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=83.29 E-value=0.82 Score=48.91 Aligned_cols=36 Identities=25% Similarity=0.416 Sum_probs=29.9
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|++++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~ 39 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGA------RVVITGRT 39 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 35677888888 68999999999999998 78887743
No 378
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=83.26 E-value=2.2 Score=46.52 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=27.4
Q ss_pred cCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 114 ASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 114 ~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
+.+|||.|+ |++|..+++.|...| .+|++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g-~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNN-WHAVGCGF 34 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTT-CEEEEEC-
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCC-CeEEEEcc
Confidence 468999997 899999999999999 47888874
No 379
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=83.20 E-value=1.8 Score=47.47 Aligned_cols=31 Identities=29% Similarity=0.408 Sum_probs=26.8
Q ss_pred eEEEEcCChHHHHHHHHHHHh-----CCCeEEEEeC
Q 001331 116 NILVSGMQGLGAEIAKNLILA-----GVKSVTLHDE 146 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvla-----GVg~itlvD~ 146 (1099)
+|.|||+|.+|+.++..|..+ |-..|+++|.
T Consensus 10 ~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 799999999999999999999 7236888763
No 380
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=83.19 E-value=0.67 Score=50.07 Aligned_cols=35 Identities=20% Similarity=0.425 Sum_probs=31.7
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+ +++|+|+|+.|..++..|+..|+ .+|+|++.+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L~~~G~-----~~I~v~nR~ 141 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYALLQMGV-----KDIWVVNRT 141 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHHHHTTC-----CCEEEEESC
T ss_pred CCC-eEEEECcHHHHHHHHHHHHHcCC-----CEEEEEeCC
Confidence 466 99999999999999999999999 899998754
No 381
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=83.16 E-value=0.78 Score=53.50 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=33.0
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCC--CeEEEEe
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGV--KSVTLHD 145 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGV--g~itlvD 145 (1099)
.|++.+|+|+|+||.|..+++.|...|+ ++|+++|
T Consensus 183 ~l~~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 183 KISEITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CTTTCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 4678899999999999999999999999 8999999
No 382
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=83.15 E-value=0.51 Score=52.11 Aligned_cols=44 Identities=16% Similarity=0.296 Sum_probs=36.2
Q ss_pred cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 104 YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 104 ~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
|.......|.+++|.|||+|.+|..+|+.|...|. +|..+|...
T Consensus 112 w~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 155 (290)
T 3gvx_A 112 FRQSPTTLLYGKALGILGYGGIGRRVAHLAKAFGM-RVIAYTRSS 155 (290)
T ss_dssp CCCCCCCCCTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSC
T ss_pred cccCCceeeecchheeeccCchhHHHHHHHHhhCc-EEEEEeccc
Confidence 43333345889999999999999999999999998 788888643
No 383
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=83.10 E-value=0.75 Score=49.10 Aligned_cols=38 Identities=24% Similarity=0.434 Sum_probs=30.5
Q ss_pred HHHHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 506 QKKLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 506 q~~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
...+...+|.|||+|.+|..++++|+..|. ++++.|.+
T Consensus 14 ~~~~~~~kIgiIG~G~mG~alA~~L~~~G~------~V~~~~r~ 51 (245)
T 3dtt_A 14 NLYFQGMKIAVLGTGTVGRTMAGALADLGH------EVTIGTRD 51 (245)
T ss_dssp -----CCEEEEECCSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred ccccCCCeEEEECCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 457889999999999999999999999997 78888755
No 384
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=83.09 E-value=2.4 Score=45.59 Aligned_cols=96 Identities=10% Similarity=0.040 Sum_probs=57.5
Q ss_pred CcEEEEc-CCcchHHHHHHHHHc-CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 512 AKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~-Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
.+|+|.| .|.||..+++.|+.. |. ++++++.+.-....+ ..+ .++
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~------~V~~~~R~~~~~~~~-------------------------~~~--~v~ 47 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHID------HFHIGVRNVEKVPDD-------------------------WRG--KVS 47 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCT------TEEEEESSGGGSCGG-------------------------GBT--TBE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCC------cEEEEECCHHHHHHh-------------------------hhC--CCE
Confidence 3799999 599999999999987 65 788776543111100 012 344
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccCc-------hHHHHHHHhhcccccc-cEEEcCc
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALDN-------VNARLYVDQRCLYFQK-PLLESGT 643 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn-------~~ar~~i~~~c~~~~~-Pli~sgt 643 (1099)
.+...+.+. +.+ ...++++|+||++... ...-..+-+.|.+.++ .+|..++
T Consensus 48 ~~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 48 VRQLDYFNQ-ESM--VEAFKGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp EEECCTTCH-HHH--HHHTTTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEcCCCCH-HHH--HHHHhCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 455555432 112 3456889999988653 2333455666776664 3554444
No 385
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=83.08 E-value=2.1 Score=47.75 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=52.5
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
+.++.|+|.| .||||.++++.|+..|. ++++++.+... ....+.+.+++.+....+ +
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~------~V~~~~r~~~~--------------r~~~~~~~l~~~~~~~~~--~ 60 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGH------RVYASMRDIVG--------------RNASNVEAIAGFARDNDV--D 60 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESCTTT--------------TTHHHHHHHHHHHHHHTC--C
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC------EEEEecCcccc--------------cCHHHHHHHHHHHHhcCC--c
Confidence 4566788888 69999999999999998 77776654321 123344555555555443 4
Q ss_pred EEEEecccCcccc--cccc--hhhhcCCCEEEEccC
Q 001331 588 IEALQNRVGPETE--NVFD--DTFWENITCVINALD 619 (1099)
Q Consensus 588 i~~~~~~v~~~~e--~~~~--~~~~~~~DvVi~alD 619 (1099)
+..+...+..... ..+. .+-+...|+||++..
T Consensus 61 ~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 61 LRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAG 96 (324)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCC
T ss_pred EEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5666666654221 1110 011237888887753
No 386
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=82.95 E-value=1.5 Score=47.05 Aligned_cols=35 Identities=20% Similarity=0.449 Sum_probs=29.0
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 40 (267)
T 2gdz_A 5 VNGKVALVTGAAQGIGRAFAEALLLKGA------KVALVDWN 40 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC------EEEEEECC
Confidence 3466889998 68999999999999997 78887743
No 387
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=82.95 E-value=3.9 Score=48.09 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=28.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
..+|.|||+|.+|+.++.+|+..|. +++++|.
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~------~V~v~dr 36 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGY------TVAIYNR 36 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTC------CEEEECS
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCC------EEEEEcC
Confidence 3589999999999999999999997 6777764
No 388
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=82.93 E-value=1.5 Score=51.34 Aligned_cols=108 Identities=13% Similarity=0.120 Sum_probs=64.5
Q ss_pred hcCcEEEEcCCcc--hHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 510 EDAKVFIVGSGAL--GCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 510 ~~~~v~vvG~Ggl--G~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
++.||.|||+|.+ |..++..|+..-. ..|.|+++|-|.= -|.+ ....++.+.+ ...+
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~---~~geV~L~Di~~e---~le~-------------~~~~~~~l~~--~~~~ 62 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDER---MSGTVALYDLDFE---AAQK-------------NEVIGNHSGN--GRWR 62 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSS---CCEEEEEECSSHH---HHHH-------------HHHHHTTSTT--SCEE
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccc---cCCeEEEEeCCHH---HHHH-------------HHHHHHHHhc--cCCe
Confidence 4569999999998 5899999987552 1279999986531 1111 0011111111 2344
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEcc--CchHHHHHHHhhcccccccEEEcCcCcccc
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINAL--DNVNARLYVDQRCLYFQKPLLESGTLGAKC 648 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~al--Dn~~ar~~i~~~c~~~~~Pli~sgt~G~~G 648 (1099)
|++.. +. .+-+++.|+||.++ ...++|..=.++.+++|.-=--+-|.|..|
T Consensus 63 I~~Tt-----D~-----~eAl~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GG 115 (450)
T 3fef_A 63 YEAVS-----TL-----KKALSAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGG 115 (450)
T ss_dssp EEEES-----SH-----HHHHTTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHH
T ss_pred EEEEC-----CH-----HHHhcCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCch
Confidence 44321 11 24578999999999 677888876777777776322124555444
No 389
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=82.93 E-value=2.2 Score=47.60 Aligned_cols=73 Identities=10% Similarity=0.133 Sum_probs=50.1
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHc-CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~-Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
...++.|||+|+.|..+++.|+.. ++ .++.+.|.+ ..|++.+++.+.... +.+
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~-----~~V~v~~r~-------------------~~~a~~la~~~~~~~--~~~ 177 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDI-----GEVKAYDVR-------------------EKAAKKFVSYCEDRG--ISA 177 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCC-----CEEEEECSS-------------------HHHHHHHHHHHHHTT--CCE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCc-----cEEEEECCC-------------------HHHHHHHHHHHHhcC--ceE
Confidence 467999999999999999999875 56 678877632 346666666665421 233
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccCc
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALDN 620 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn 620 (1099)
. +. +. .+.. ++|+|++|+-+
T Consensus 178 ~-~~-----~~-----~e~v-~aDvVi~aTp~ 197 (322)
T 1omo_A 178 S-VQ-----PA-----EEAS-RCDVLVTTTPS 197 (322)
T ss_dssp E-EC-----CH-----HHHT-SSSEEEECCCC
T ss_pred E-EC-----CH-----HHHh-CCCEEEEeeCC
Confidence 2 21 11 2445 89999999864
No 390
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=82.92 E-value=1 Score=48.92 Aligned_cols=34 Identities=21% Similarity=0.216 Sum_probs=31.2
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
+.+++|+|+|+||+|..++..|...| .+|+++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G-~~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLD-CAVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcC-CEEEEEEC
Confidence 56889999999999999999999999 79999874
No 391
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=82.89 E-value=6.7 Score=45.95 Aligned_cols=33 Identities=21% Similarity=0.278 Sum_probs=30.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
.+|.|||+|-.|+-||.+|+.+|. .|+++|.+.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcH
Confidence 589999999999999999999998 899998653
No 392
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=82.87 E-value=3.6 Score=44.08 Aligned_cols=104 Identities=13% Similarity=0.111 Sum_probs=56.5
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC
Q 001331 116 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 194 (1099)
Q Consensus 116 ~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~ 194 (1099)
+|||.|+ |.+|..+++.|...|. +|+.++... .|+.. .+.+.+.+.+..+++-|+.-.....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--------------~D~~d--~~~~~~~~~~~~~d~vi~~a~~~~~ 69 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEY-DIYPFDKKL--------------LDITN--ISQVQQVVQEIRPHIIIHCAAYTKV 69 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTE-EEEEECTTT--------------SCTTC--HHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEecccc--------------cCCCC--HHHHHHHHHhcCCCEEEECCcccCh
Confidence 7999995 9999999999999995 788887622 23322 2333444444333332222110000
Q ss_pred hhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEeecceeE
Q 001331 195 KEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAEVRGLFG 240 (1099)
Q Consensus 195 ~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~~~G~~G 240 (1099)
.......+-. -..+......+-+.|++.+ +.||..++.+.+|
T Consensus 70 ~~~~~~~~~~--~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~vy~ 111 (287)
T 3sc6_A 70 DQAEKERDLA--YVINAIGARNVAVASQLVG--AKLVYISTDYVFQ 111 (287)
T ss_dssp HHHTTCHHHH--HHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSC
T ss_pred HHHhcCHHHH--HHHHHHHHHHHHHHHHHcC--CeEEEEchhhhcC
Confidence 0000000000 0001112345778899998 7899988877665
No 393
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=82.80 E-value=1.9 Score=47.68 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=28.5
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCC-CCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVS-CGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~-~~~~g~i~ivD~D 549 (1099)
+.+++|+|.| +|+||..+++.|+..|.. ..+.-+++++|.+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 3456899999 699999999999999810 0000167777753
No 394
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=82.80 E-value=0.72 Score=49.66 Aligned_cols=98 Identities=10% Similarity=0.112 Sum_probs=59.0
Q ss_pred CcEEEEcC-CcchHHHHHHHHHc--CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeE
Q 001331 512 AKVFIVGS-GALGCEFLKNVALM--GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 512 ~~v~vvG~-GglG~evlk~La~~--Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i 588 (1099)
++|+|.|+ |.||+.+++.|+.. |. ++++++.+. + +... +.. +. +
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~------~V~~~~r~~---~----------------~~~~----l~~--~~--~ 47 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPAS------QIIAIVRNV---E----------------KAST----LAD--QG--V 47 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGG------GEEEEESCT---T----------------TTHH----HHH--TT--C
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCC------eEEEEEcCH---H----------------HHhH----Hhh--cC--C
Confidence 47999996 99999999999988 75 788776431 0 0110 111 22 3
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccC-------chHHHHHHHhhcccccc-cEEEcCcCc
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALD-------NVNARLYVDQRCLYFQK-PLLESGTLG 645 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alD-------n~~ar~~i~~~c~~~~~-Pli~sgt~G 645 (1099)
+.+...+... +.+ .+.++++|+||++.. |+..-..+-+.|.+.++ .+|..++.+
T Consensus 48 ~~~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 48 EVRHGDYNQP-ESL--QKAFAGVSKLLFISGPHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp EEEECCTTCH-HHH--HHHTTTCSEEEECCCCCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred eEEEeccCCH-HHH--HHHHhcCCEEEEcCCCCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 3444444432 112 345678999998764 44455566677777664 455554443
No 395
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=82.77 E-value=2.1 Score=48.11 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=50.9
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCC---
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINP--- 584 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np--- 584 (1099)
.....||.|||+|.+|+.++..|++.|.+ ..++++|-+ ..|++..+.-+....+
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~~~~~~----~el~L~Di~-------------------~~~~~g~a~DL~~~~~~~~ 72 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISILMKDLA----DELALVDVI-------------------EDKLKGEMMDLQHGSLFLK 72 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSC-------------------HHHHHHHHHHHHHTGGGCS
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHhCCCC----ceEEEEeCC-------------------hHHHHHHHHhhhhhhhccC
Confidence 44567999999999999999999999973 478988742 3456666666665432
Q ss_pred CCeEEEEecccCcccccccchhhhcCCCEEEEcc
Q 001331 585 RLNIEALQNRVGPETENVFDDTFWENITCVINAL 618 (1099)
Q Consensus 585 ~~~i~~~~~~v~~~~e~~~~~~~~~~~DvVi~al 618 (1099)
...+... .+ + +-+++.|+||.+.
T Consensus 73 ~~~i~~~-----~d----~--~~~~~aDiVvi~a 95 (331)
T 4aj2_A 73 TPKIVSS-----KD----Y--SVTANSKLVIITA 95 (331)
T ss_dssp CCEEEEC-----SS----G--GGGTTEEEEEECC
T ss_pred CCeEEEc-----CC----H--HHhCCCCEEEEcc
Confidence 1122211 01 1 2268899888774
No 396
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=82.77 E-value=1.7 Score=53.26 Aligned_cols=36 Identities=17% Similarity=0.226 Sum_probs=28.7
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHc-CCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~-Gv~~~~~g~i~ivD~D 549 (1099)
.+..++|+|.| .|.||+++++.|+.. |. +++++|..
T Consensus 312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~------~V~~~~r~ 349 (660)
T 1z7e_A 312 ARRRTRVLILGVNGFIGNHLTERLLREDHY------EVYGLDIG 349 (660)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHHHSSSE------EEEEEESC
T ss_pred hccCceEEEEcCCcHHHHHHHHHHHhcCCC------EEEEEEcC
Confidence 35667899999 599999999999998 65 78887754
No 397
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=82.72 E-value=2.4 Score=45.32 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=29.2
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r 39 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT------AIALLDM 39 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeC
Confidence 5677899998 68999999999999997 7888764
No 398
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=82.68 E-value=0.99 Score=49.27 Aligned_cols=33 Identities=30% Similarity=0.429 Sum_probs=30.2
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEec
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
.+++|+|+|+||.|..++..|+..|+ .+|+|++
T Consensus 118 ~~~~vlvlGaGgaarav~~~L~~~G~-----~~i~v~n 150 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAFKNSGF-----EKLKIYA 150 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHHHHTTC-----CCEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-----CEEEEEe
Confidence 35789999999999999999999999 8999985
No 399
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=82.66 E-value=0.4 Score=57.11 Aligned_cols=60 Identities=20% Similarity=0.376 Sum_probs=44.9
Q ss_pred CchhhhhhhcCHHHH------------------HHHhcCcEEEEcCCcchHHHHHHHHH----cCCCCC-CCccEEEecC
Q 001331 492 SRYDAQISVFGAKLQ------------------KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCG-NQGKLTITDD 548 (1099)
Q Consensus 492 ~Rydrqi~l~G~~~q------------------~~L~~~~v~vvG~GglG~evlk~La~----~Gv~~~-~~g~i~ivD~ 548 (1099)
+||...+.+|..+.| ++|.+.||++.|+|+-|+.+++.|+. .|+.-. ...+|+++|.
T Consensus 283 ~ryr~~ipvFnDDiqGTA~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~ 362 (605)
T 1o0s_A 283 DKYQDKYTMFNDDIQGTASVIVAGLLTCTRVTKKLVSQEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDI 362 (605)
T ss_dssp HHHTTTSEEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEET
T ss_pred HHhccCCCeeCcccchHHHHHHHHHHHHHHHhCCChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEEC
Confidence 567666667766544 46889999999999999999999998 675100 0168999998
Q ss_pred Ccc
Q 001331 549 DVI 551 (1099)
Q Consensus 549 D~I 551 (1099)
.-+
T Consensus 363 ~Gl 365 (605)
T 1o0s_A 363 DGL 365 (605)
T ss_dssp TEE
T ss_pred CCc
Confidence 654
No 400
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=82.63 E-value=0.77 Score=51.05 Aligned_cols=34 Identities=18% Similarity=0.383 Sum_probs=29.4
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
..||+|+|+|++|+.++..|++.|. .++++|.+.
T Consensus 2 ~mkI~IiGaGaiG~~~a~~L~~~g~------~V~~~~r~~ 35 (320)
T 3i83_A 2 SLNILVIGTGAIGSFYGALLAKTGH------CVSVVSRSD 35 (320)
T ss_dssp -CEEEEESCCHHHHHHHHHHHHTTC------EEEEECSTT
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC------eEEEEeCCh
Confidence 3689999999999999999999986 888887553
No 401
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=82.59 E-value=4.1 Score=44.90 Aligned_cols=36 Identities=22% Similarity=0.313 Sum_probs=28.7
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 111 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 111 kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.+...+|||.| .|++|..+++.|+..| .+|+++|..
T Consensus 18 ~~~~~~vlVTGatG~iG~~l~~~L~~~g-~~V~~~~r~ 54 (333)
T 2q1w_A 18 GSHMKKVFITGICGQIGSHIAELLLERG-DKVVGIDNF 54 (333)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECC
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHCC-CEEEEEECC
Confidence 34557899998 6899999999999999 478888764
No 402
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=82.51 E-value=1.9 Score=47.05 Aligned_cols=93 Identities=13% Similarity=0.091 Sum_probs=0.0
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSK 192 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~ 192 (1099)
...+|.|||+|.+|..++++|...|. .++++| |.....+.+.+. ......
T Consensus 3 ~~~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-----------------------~~~~~~~~~~~~------g~~~~~ 52 (301)
T 3cky_A 3 KSIKIGFIGLGAMGKPMAINLLKEGV-TVYAFD-----------------------LMEANVAAVVAQ------GAQACE 52 (301)
T ss_dssp -CCEEEEECCCTTHHHHHHHHHHTTC-EEEEEC-----------------------SSHHHHHHHHTT------TCEECS
T ss_pred CCCEEEEECccHHHHHHHHHHHHCCC-eEEEEe-----------------------CCHHHHHHHHHC------CCeecC
Q ss_pred CChhhccCCcEEEEec-CCHHHHHHHH---HHHHhcCCCceeEEEee
Q 001331 193 LTKEQLSDFQAVVFTD-ISLDKAIEFD---DFCHNHQPAISFIKAEV 235 (1099)
Q Consensus 193 l~~~~l~~~dvVV~~~-~~~~~~~~ln---~~c~~~~~~ipfI~~~~ 235 (1099)
-..+.+.+.|+||+|. .+......+. ++.....+...+|+..+
T Consensus 53 ~~~~~~~~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~ 99 (301)
T 3cky_A 53 NNQKVAAASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSS 99 (301)
T ss_dssp SHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCC
T ss_pred CHHHHHhCCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCC
No 403
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=82.45 E-value=2.1 Score=46.64 Aligned_cols=33 Identities=33% Similarity=0.500 Sum_probs=29.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
.+|.|||+|.+|..++++|...|. .++++|.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCH
Confidence 589999999999999999999995 899998654
No 404
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=82.44 E-value=4.2 Score=44.90 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=49.3
Q ss_pred eEEEEc-CChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHH---hCCCcEEEEEe
Q 001331 116 NILVSG-MQGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQE---LNNAVVLSTLT 190 (1099)
Q Consensus 116 ~VlIiG-~gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~e---LNp~V~v~~~~ 190 (1099)
||+|+| +|.+|..++..|+..|. .++.|+|.. .+ ..|++....-|.. +...+++..
T Consensus 2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~----~~-------------~~~~~~~~~dl~~~~~~~~~~~v~~-- 62 (303)
T 1o6z_A 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIP----DK-------------EDDTVGQAADTNHGIAYDSNTRVRQ-- 62 (303)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCG----GG-------------HHHHHHHHHHHHHHHTTTCCCEEEE--
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCC----CC-------------hhhHHHHHHHHHHHHhhCCCcEEEe--
Confidence 799999 99999999999998885 458888850 00 1133222233333 356667766
Q ss_pred cCCChhhccCCcEEEEecC
Q 001331 191 SKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 191 ~~l~~~~l~~~dvVV~~~~ 209 (1099)
. +.+.+.+.|+||.+..
T Consensus 63 ~--~~~a~~~aDvVi~~ag 79 (303)
T 1o6z_A 63 G--GYEDTAGSDVVVITAG 79 (303)
T ss_dssp C--CGGGGTTCSEEEECCC
T ss_pred C--CHHHhCCCCEEEEcCC
Confidence 2 2556889999998754
No 405
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=82.44 E-value=1.7 Score=47.93 Aligned_cols=35 Identities=17% Similarity=0.307 Sum_probs=28.0
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+|+|.| .|+||..+++.|+..|-+ -+++++|..
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~----~~V~~~~r~ 38 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPD----WEVINIDKL 38 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTT----CEEEEEECC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCC----CEEEEEecC
Confidence 46899999 599999999999999830 277877753
No 406
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=82.40 E-value=1.9 Score=44.30 Aligned_cols=92 Identities=22% Similarity=0.121 Sum_probs=58.3
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCC
Q 001331 116 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLT 194 (1099)
Q Consensus 116 ~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~ 194 (1099)
+|+|.|+ |++|.++++.|+..|. +|++++.+.- +.. .+ ..+.++ ....+++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~-------------------~~~----~~--~~~~~~--~~~~D~~ 53 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQ-------------------KAA----DR--LGATVA--TLVKEPL 53 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHH-------------------HHH----HH--TCTTSE--EEECCGG
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEeccc-------------------ccc----cc--cCCCce--EEecccc
Confidence 6999997 8999999999999995 7877764321 111 11 123333 3344442
Q ss_pred h---hhccCCcEEEEecCC----------HHHHHHHHHHHHhcCCCceeEEEeecc
Q 001331 195 K---EQLSDFQAVVFTDIS----------LDKAIEFDDFCHNHQPAISFIKAEVRG 237 (1099)
Q Consensus 195 ~---~~l~~~dvVV~~~~~----------~~~~~~ln~~c~~~~~~ipfI~~~~~G 237 (1099)
+ +.+.++|+||.+... ......+-+.|++.+ ..+|..++.|
T Consensus 54 d~~~~~~~~~d~vi~~ag~~~~~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~ 107 (224)
T 3h2s_A 54 VLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSD--TLAVFILGSA 107 (224)
T ss_dssp GCCHHHHTTCSEEEECCCCCTTSSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGG
T ss_pred cccHhhcccCCEEEECCccCCCcchhhHHHHHHHHHHHHHHHcC--CcEEEEecce
Confidence 2 457789999877532 223345566777777 6777776654
No 407
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=82.38 E-value=1.2 Score=47.52 Aligned_cols=35 Identities=17% Similarity=0.298 Sum_probs=28.7
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 38 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGA------TVYITGRH 38 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 4566778887 78999999999999997 78887643
No 408
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=82.38 E-value=1.4 Score=48.70 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=28.0
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.++|+|.| +|.||+.+++.|+..|. +++++|..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY------LPVVIDNF 35 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC------CEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEecC
Confidence 46899998 59999999999999986 78887743
No 409
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=82.32 E-value=0.95 Score=50.00 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=28.4
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
.+.||-+||+|-.|..++++|+..|. ++++.|.+.
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~~~G~------~V~v~dr~~ 38 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILLEAGY------ELVVWNRTA 38 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHHTTC------EEEEC----
T ss_pred CCCcEEEEecHHHHHHHHHHHHHCCC------eEEEEeCCH
Confidence 35689999999999999999999998 788887543
No 410
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=82.28 E-value=3.3 Score=48.43 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=30.1
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
..++|+|+|+|++|..+++.|+..|. +++++|.+
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~ 35 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRT 35 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECC
Confidence 46789999999999999999999995 69998864
No 411
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=82.22 E-value=2.2 Score=45.79 Aligned_cols=81 Identities=11% Similarity=0.117 Sum_probs=52.4
Q ss_pred HHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHH-HHHHHHHHhhCC
Q 001331 507 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKS-TVAASAATSINP 584 (1099)
Q Consensus 507 ~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka-~vaa~~l~~~np 584 (1099)
..+.+++|+|.| .||||.++++.|+..|. +++++|.+.-...+. +..+-..|+..+.+ +.+.+.+.+...
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~------~V~~~~r~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNY------RVVATSRSIKPSADP--DIHTVAGDISKPETADRIVREGIERFG 95 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEESSCCCCSST--TEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEeCChhhcccC--ceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence 357788888888 68999999999999998 899998764333322 23344567766532 333444444444
Q ss_pred CCeEEEEeccc
Q 001331 585 RLNIEALQNRV 595 (1099)
Q Consensus 585 ~~~i~~~~~~v 595 (1099)
.+.+-.+..-+
T Consensus 96 ~iD~lv~nAg~ 106 (260)
T 3un1_A 96 RIDSLVNNAGV 106 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 55555555443
No 412
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=82.19 E-value=4.8 Score=47.15 Aligned_cols=108 Identities=11% Similarity=0.082 Sum_probs=64.3
Q ss_pred hhcCeEEEEcC-ChHHHHHHHHHHHhC-C-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCC------
Q 001331 112 LFASNILVSGM-QGLGAEIAKNLILAG-V-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN------ 182 (1099)
Q Consensus 112 L~~s~VlIiG~-gglG~EiaKnLvlaG-V-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp------ 182 (1099)
....+|||.|+ |++|.++++.|...+ + .+|++++...-. + ...++|.+...
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~-------------------~-~~~~~l~~~~~~~~~~~ 130 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESD-------------------E-DARRRLEKTFDSGDPEL 130 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSH-------------------H-HHHHHHHGGGCSSCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCc-------------------H-HHHHHHHHHHHhcchhh
Confidence 45779999995 889999999999983 1 478887753211 1 11122222111
Q ss_pred --------CcEEEEEecCCC-------h----hhccCCcEEEEecC-------------CHHHHHHHHHHHHhcCCCcee
Q 001331 183 --------AVVLSTLTSKLT-------K----EQLSDFQAVVFTDI-------------SLDKAIEFDDFCHNHQPAISF 230 (1099)
Q Consensus 183 --------~V~v~~~~~~l~-------~----~~l~~~dvVV~~~~-------------~~~~~~~ln~~c~~~~~~ipf 230 (1099)
.-.+.....+++ . ..+.+.|+||-+.. +......+-+.|++.+. ..|
T Consensus 131 ~~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~~ 209 (478)
T 4dqv_A 131 LRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTKL-KPF 209 (478)
T ss_dssp HHHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSSC-CCE
T ss_pred hhhhhhhccCceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCCC-CeE
Confidence 124555555553 1 23457788886642 22234466778888771 278
Q ss_pred EEEeecceeE
Q 001331 231 IKAEVRGLFG 240 (1099)
Q Consensus 231 I~~~~~G~~G 240 (1099)
|..++.+.+|
T Consensus 210 V~iSS~~v~~ 219 (478)
T 4dqv_A 210 TYVSTADVGA 219 (478)
T ss_dssp EEEEEGGGGT
T ss_pred EEEeehhhcC
Confidence 8888776543
No 413
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=82.16 E-value=4.1 Score=44.36 Aligned_cols=29 Identities=24% Similarity=0.354 Sum_probs=23.4
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEe
Q 001331 115 SNILVSGM-QGLGAEIAKNLILAGVKSVTLHD 145 (1099)
Q Consensus 115 s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD 145 (1099)
++|||.|+ |++|..+++.|...| .+++++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g--~~v~~~ 31 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESN--EIVVID 31 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTS--CEEEEC
T ss_pred CEEEEECCCchHHHHHHHHHHhCC--CEEEEE
Confidence 37999995 899999999999999 444444
No 414
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=82.04 E-value=2.2 Score=46.17 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=27.7
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 116 NILVSGM-QGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 116 ~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+|||.|+ |++|..+++.|...|...+++++..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~ 33 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccC
Confidence 5899997 8999999999999996678888754
No 415
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=82.02 E-value=1.4 Score=46.86 Aligned_cols=32 Identities=16% Similarity=0.253 Sum_probs=28.3
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC---CeEEEEeC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGV---KSVTLHDE 146 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGV---g~itlvD~ 146 (1099)
.+|.|||+|.+|..++++|...|. ..++++|.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r 37 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDL 37 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECS
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeC
Confidence 589999999999999999999996 47888774
No 416
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=81.97 E-value=1.4 Score=46.78 Aligned_cols=33 Identities=12% Similarity=0.324 Sum_probs=27.4
Q ss_pred cCcEEEEc-CCcchHHHHHHHHH-cCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVG-SGALGCEFLKNVAL-MGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~-~Gv~~~~~g~i~ivD~D 549 (1099)
+++|+|.| .|+||.++++.|+. .|. ++++++.+
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~------~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSG------DVVLTARD 38 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSS------EEEEEESS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCC------eEEEEeCC
Confidence 46778887 79999999999999 897 78887754
No 417
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=81.96 E-value=2.1 Score=47.08 Aligned_cols=99 Identities=15% Similarity=0.207 Sum_probs=59.7
Q ss_pred CcEEEEc-CCcchHHHHHHHHHc-CCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 512 AKVFIVG-SGALGCEFLKNVALM-GVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~-Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
.||.|+| +|.+|..+++.+... ++ --+-++|...- . +.-.|+|.- ..+.+ ..+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~-----eLvg~vd~~~~---~------~~G~d~gel---------~G~~~-~gv- 76 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDV-----ELCAVLVRKGS---S------FVDKDASIL---------IGSDF-LGV- 76 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSE-----EEEEEBCCTTC---T------TTTSBGGGG---------TTCSC-CSC-
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCC-----EEEEEEecCCc---c------ccccchHHh---------hccCc-CCc-
Confidence 5899999 899999999998754 44 22334454210 0 012244421 00111 111
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcCcc
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTLGA 646 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~G~ 646 (1099)
.+..+. ++.+..+|+||+++ .+.+-...-..|.++++|+| .||.|+
T Consensus 77 ----~v~~dl-----~~ll~~aDVvIDFT-~p~a~~~~~~~~l~~Gv~vV-iGTTG~ 122 (288)
T 3ijp_A 77 ----RITDDP-----ESAFSNTEGILDFS-QPQASVLYANYAAQKSLIHI-IGTTGF 122 (288)
T ss_dssp ----BCBSCH-----HHHTTSCSEEEECS-CHHHHHHHHHHHHHHTCEEE-ECCCCC
T ss_pred ----eeeCCH-----HHHhcCCCEEEEcC-CHHHHHHHHHHHHHcCCCEE-EECCCC
Confidence 111111 34567899999998 56666666779999999999 677775
No 418
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=81.89 E-value=0.9 Score=50.27 Aligned_cols=35 Identities=23% Similarity=0.452 Sum_probs=30.5
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..||.|||+|++|+.++..|+..|.. ++++++|.+
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~----~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIA----REIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCC----SEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCC
Confidence 46899999999999999999999962 589999865
No 419
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=81.89 E-value=2.8 Score=44.80 Aligned_cols=37 Identities=35% Similarity=0.491 Sum_probs=30.6
Q ss_pred HHHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 109 MRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 109 q~kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
|..|.+++|+|.| .||+|.++++.|+..|. +|.++|.
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r 61 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTAR 61 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEEC
Confidence 4457788999998 58999999999999998 5777774
No 420
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=81.89 E-value=5.5 Score=43.13 Aligned_cols=97 Identities=13% Similarity=0.141 Sum_probs=57.0
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 511 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 511 ~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.- .-...|+..+.. + ..+. ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~--------------~~~~~~~~~~~~-~--~~~~--~~ 58 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGH------PTYVLFRPEV--------------VSNIDKVQMLLY-F--KQLG--AK 58 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC------CEEEECCSCC--------------SSCHHHHHHHHH-H--HTTT--CE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC------cEEEEECCCc--------------ccchhHHHHHHH-H--HhCC--eE
Confidence 368999995 9999999999999986 6777654320 000112222211 1 1233 44
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccC------chHHHHHHHhhccccc
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALD------NVNARLYVDQRCLYFQ 635 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alD------n~~ar~~i~~~c~~~~ 635 (1099)
.+...+... +.+ ...++++|+||++.. |...-..+-+.|.+.+
T Consensus 59 ~~~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 59 LIEASLDDH-QRL--VDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 107 (313)
T ss_dssp EECCCSSCH-HHH--HHHHTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred EEeCCCCCH-HHH--HHHHhCCCEEEECCccccchhhHHHHHHHHHHHHhcC
Confidence 455555432 222 355788999999875 3344445555666654
No 421
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=81.88 E-value=1.1 Score=51.54 Aligned_cols=35 Identities=31% Similarity=0.556 Sum_probs=32.9
Q ss_pred hhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 112 LFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 112 L~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
+.+.+|+|+|+|++|..+++.|...|+++|+++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 67899999999999999999999999999999885
No 422
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=81.83 E-value=4.3 Score=43.60 Aligned_cols=36 Identities=33% Similarity=0.340 Sum_probs=28.4
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 111 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 111 kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+-..++|||.| .|.+|.++++.|...|. +|++++..
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~ 45 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNV-EVIPTDVQ 45 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSE-EEEEECTT
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCC-eEEeccCc
Confidence 45678899998 58899999999999994 78888764
No 423
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=81.83 E-value=6.6 Score=42.98 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=28.4
Q ss_pred hcCeEEEEc-CChHHHHHHHHHHHhCC-CeEEEEeCC
Q 001331 113 FASNILVSG-MQGLGAEIAKNLILAGV-KSVTLHDEG 147 (1099)
Q Consensus 113 ~~s~VlIiG-~gglG~EiaKnLvlaGV-g~itlvD~d 147 (1099)
.+.+|||.| .|++|..+++.|+..|- -+|+++|..
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~ 38 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKL 38 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECC
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecC
Confidence 346899999 59999999999999984 378888754
No 424
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=81.83 E-value=3.8 Score=45.53 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=50.5
Q ss_pred CeEEEEc-CChHHHHHHHHHHHh-CC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 115 SNILVSG-MQGLGAEIAKNLILA-GV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 115 s~VlIiG-~gglG~EiaKnLvla-GV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
.+|.|+| +|.+|..++..|... +. .+|.|+|... +++....-|+.....+++..+..
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~--------------------~~~G~a~Dl~~~~~~~~v~~~~~ 60 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP--------------------VTPGVAVDLSHIPTAVKIKGFSG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST--------------------THHHHHHHHHTSCSSEEEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC--------------------CchhHHHHhhCCCCCceEEEecC
Confidence 3799999 899999999999876 54 5899998532 12222334444444556665533
Q ss_pred CCChhhccCCcEEEEecC
Q 001331 192 KLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~~ 209 (1099)
.-+.+-+.+.|+||++..
T Consensus 61 ~~~~~~~~~aDivii~ag 78 (312)
T 3hhp_A 61 EDATPALEGADVVLISAG 78 (312)
T ss_dssp SCCHHHHTTCSEEEECCS
T ss_pred CCcHHHhCCCCEEEEeCC
Confidence 224467889999998863
No 425
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=81.81 E-value=3.8 Score=45.22 Aligned_cols=94 Identities=7% Similarity=0.050 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchH--HHHHHHHHHHhCCCcE-------E
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNR--ALASVQKLQELNNAVV-------L 186 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~K--aea~~~~L~eLNp~V~-------v 186 (1099)
+|.|||+|.+|+.+|.+|..+|. .++++| | .....+.+++..-.+. +
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~-~V~~~~-----------------------r~~~~~~~~~~~~~~~~~~~g~~~~~~ 57 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWG-----------------------TEFDTEILKSISAGREHPRLGVKLNGV 57 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEEC-----------------------CGGGHHHHHHHHTTCCBTTTTBCCCSE
T ss_pred EEEEECcCHHHHHHHHHHHhCCC-eEEEEE-----------------------ccCCHHHHHHHHHhCcCcccCccccce
Q ss_pred EEEecCCChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEe
Q 001331 187 STLTSKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAE 234 (1099)
Q Consensus 187 ~~~~~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~ 234 (1099)
......-..+.+.++|+||+|..+......+..+.. ..+...+|...
T Consensus 58 ~~~~~~~~~~~~~~~D~vi~~v~~~~~~~v~~~i~~-l~~~~~vv~~~ 104 (335)
T 1txg_A 58 EIFWPEQLEKCLENAEVVLLGVSTDGVLPVMSRILP-YLKDQYIVLIS 104 (335)
T ss_dssp EEECGGGHHHHHTTCSEEEECSCGGGHHHHHHHHTT-TCCSCEEEECC
T ss_pred EEecHHhHHHHHhcCCEEEEcCChHHHHHHHHHHhc-CCCCCEEEEEc
No 426
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.79 E-value=1.5 Score=46.73 Aligned_cols=34 Identities=12% Similarity=0.226 Sum_probs=28.8
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+.+++|+|.| .|+||.++++.|+..|. +++++|.
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~------~v~~~~r 53 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGA------SVVVNYG 53 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEcC
Confidence 5667899998 68999999999999997 7777764
No 427
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=81.77 E-value=1.6 Score=47.22 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=28.2
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+.++.++|.| .||||.++++.|+..|. +++++|.+
T Consensus 25 ~~~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~ 61 (272)
T 4dyv_A 25 KTGKKIAIVTGAGSGVGRAVAVALAGAGY------GVALAGRR 61 (272)
T ss_dssp ---CCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEECC
Confidence 56677778887 68999999999999998 78888754
No 428
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=81.74 E-value=4.5 Score=43.63 Aligned_cols=35 Identities=31% Similarity=0.499 Sum_probs=30.2
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 111 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 111 kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
.|.+++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r 43 (281)
T 3svt_A 8 SFQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGR 43 (281)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CcCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeC
Confidence 56788999997 67999999999999998 6888774
No 429
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=81.73 E-value=0.78 Score=52.96 Aligned_cols=35 Identities=29% Similarity=0.528 Sum_probs=32.2
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+.+++|+|+|+|++|..+++.|...|+ ++++++|.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~-----~~V~v~~r 199 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGV-----RAVLVANR 199 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCC-----SEEEEECS
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCC-----CEEEEEeC
Confidence 678899999999999999999999998 89999864
No 430
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=81.72 E-value=0.9 Score=49.48 Aligned_cols=36 Identities=11% Similarity=0.348 Sum_probs=31.4
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+.+++|+|+|+|++|..+++.|+..|+ +++++|.+
T Consensus 126 ~~~~~~v~iiGaG~~g~aia~~L~~~g~------~V~v~~r~ 161 (275)
T 2hk9_A 126 EVKEKSILVLGAGGASRAVIYALVKEGA------KVFLWNRT 161 (275)
T ss_dssp TGGGSEEEEECCSHHHHHHHHHHHHHTC------EEEEECSS
T ss_pred CcCCCEEEEECchHHHHHHHHHHHHcCC------EEEEEECC
Confidence 3678899999999999999999999997 78887643
No 431
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=81.70 E-value=2.5 Score=47.49 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=31.1
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.|.+++|.|||.|.||.++++.+...|+ ++...|.
T Consensus 138 ~l~g~tvGIiG~G~IG~~va~~~~~fg~------~v~~~d~ 172 (334)
T 3kb6_A 138 ELNRLTLGVIGTGRIGSRVAMYGLAFGM------KVLCYDV 172 (334)
T ss_dssp CGGGSEEEEECCSHHHHHHHHHHHHTTC------EEEEECS
T ss_pred eecCcEEEEECcchHHHHHHHhhcccCc------eeeecCC
Confidence 4778899999999999999999999998 7777774
No 432
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=81.64 E-value=4.9 Score=44.42 Aligned_cols=33 Identities=24% Similarity=0.311 Sum_probs=29.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCC-CeEEEEeCC
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGV-KSVTLHDEG 147 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGV-g~itlvD~d 147 (1099)
.+|.|||+|.+|+.++..|+..|. ..|+|+|-+
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~ 48 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLS 48 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 689999999999999999999995 479999864
No 433
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=81.64 E-value=3.1 Score=45.10 Aligned_cols=98 Identities=9% Similarity=0.189 Sum_probs=56.1
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEE
Q 001331 511 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIE 589 (1099)
Q Consensus 511 ~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~ 589 (1099)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.-.. + ...|+..+. .+. .++ ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~------~V~~l~R~~~~~----~---------~~~~~~~~~-~l~--~~~--v~ 59 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH------PTFLLVRESTAS----S---------NSEKAQLLE-SFK--ASG--AN 59 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC------CEEEECCCCCTT----T---------THHHHHHHH-HHH--TTT--CE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC------CEEEEECCcccc----c---------CHHHHHHHH-HHH--hCC--CE
Confidence 368999996 9999999999999986 677765432100 0 012322221 111 233 44
Q ss_pred EEecccCcccccccchhhhcCCCEEEEccCch--HHHHHHHhhccccc
Q 001331 590 ALQNRVGPETENVFDDTFWENITCVINALDNV--NARLYVDQRCLYFQ 635 (1099)
Q Consensus 590 ~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~--~ar~~i~~~c~~~~ 635 (1099)
.+...+... +.+ ...++++|+||++.... ..-..+-+.|.+.+
T Consensus 60 ~v~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 60 IVHGSIDDH-ASL--VEAVKNVDVVISTVGSLQIESQVNIIKAIKEVG 104 (308)
T ss_dssp EECCCTTCH-HHH--HHHHHTCSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred EEEeccCCH-HHH--HHHHcCCCEEEECCcchhhhhHHHHHHHHHhcC
Confidence 455555432 222 34568899999998643 22234445555554
No 434
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=81.63 E-value=3.3 Score=46.93 Aligned_cols=33 Identities=24% Similarity=0.246 Sum_probs=29.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
..+|.|||+|.+|+.+|..|+..|. .++++|.+
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~-~V~l~~r~ 61 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQ-KVRLWSYE 61 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTC-CEEEECSC
T ss_pred CCeEEEECccHHHHHHHHHHHHCCC-eEEEEeCC
Confidence 4689999999999999999999995 68888764
No 435
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=81.54 E-value=6 Score=44.11 Aligned_cols=109 Identities=15% Similarity=0.084 Sum_probs=0.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcE---------
Q 001331 115 SNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVV--------- 185 (1099)
Q Consensus 115 s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~--------- 185 (1099)
.+|.|||+|-.|+-||-.++.+|. .++|+|.+.=.... +..+.+...+++.+....-.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~------------~~~~i~~~l~~~~~~g~~~~~~~~~~~l~ 73 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITG------------ALENIRKEMKSLQQSGSLKGSLSAEEQLS 73 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHH------------HHHHHHHHHHHHHHTTCCCSSSCHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHH------------HHHHHHHHHHHHHHcCCCCCccCHHHHHh
Q ss_pred -EEEEecCCChhhccCCcEEEEecC-CHHHHHHHHHHHHhcCCCceeEEEeecce
Q 001331 186 -LSTLTSKLTKEQLSDFQAVVFTDI-SLDKAIEFDDFCHNHQPAISFIKAEVRGL 238 (1099)
Q Consensus 186 -v~~~~~~l~~~~l~~~dvVV~~~~-~~~~~~~ln~~c~~~~~~ipfI~~~~~G~ 238 (1099)
++..+. -.+.+.+.|+||-+.. +++.+..+-.-..+.-++-.+|.+.|.++
T Consensus 74 ~i~~~~~--l~~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl 126 (319)
T 3ado_A 74 LISSCTN--LAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCL 126 (319)
T ss_dssp TEEEECC--HHHHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSC
T ss_pred hcccccc--hHhHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhc
No 436
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=81.52 E-value=2.8 Score=46.32 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=60.5
Q ss_pred CcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 512 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
++|+|.| .|.||..+++.|+..|-+ -+++++|...-. .+. . .+..+. .-+++.
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g----~~V~~~~r~~~~-~~~--~------------------~~~~~~-~~~~~~ 58 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPD----VHVTVLDKLTYA-GNK--A------------------NLEAIL-GDRVEL 58 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTT----CEEEEEECCCTT-CCG--G------------------GTGGGC-SSSEEE
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCC----CEEEEEeCCCCC-CCh--h------------------HHhhhc-cCCeEE
Confidence 5799999 699999999999999320 278888753210 000 0 000111 124455
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCch-----------------HHHHHHHhhcccccccEEEcCcCcccc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNV-----------------NARLYVDQRCLYFQKPLLESGTLGAKC 648 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~-----------------~ar~~i~~~c~~~~~Pli~sgt~G~~G 648 (1099)
+...+.... .+ .+.++++|+||++.... .+-..+-+.|...+..+|..++.+.+|
T Consensus 59 ~~~Dl~d~~-~~--~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg 130 (348)
T 1oc2_A 59 VVGDIADAE-LV--DKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYG 130 (348)
T ss_dssp EECCTTCHH-HH--HHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGC
T ss_pred EECCCCCHH-HH--HHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeC
Confidence 555554321 11 34567789888876422 122345566666666677666655444
No 437
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=81.51 E-value=2.3 Score=45.56 Aligned_cols=35 Identities=23% Similarity=0.275 Sum_probs=29.0
Q ss_pred hcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 113 FASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 113 ~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
..++|+|.| .|++|.++++.|+..|. ++.+.|.+.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~ 37 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSP 37 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCC
Confidence 346799998 68999999999999995 788887654
No 438
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=81.49 E-value=2 Score=45.40 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=27.0
Q ss_pred hcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 510 EDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 510 ~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~------~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY------NVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEeC
Confidence 456777777 68999999999999998 7777663
No 439
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=81.45 E-value=2.5 Score=44.32 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=27.9
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEec
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
+.+++|+|.| .|+||.++++.|+..|. +++++|
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~------~V~~~~ 36 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGA------NIVLNG 36 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTC------EEEEEE
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC------EEEEEc
Confidence 4567888887 68999999999999997 777774
No 440
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=81.44 E-value=0.76 Score=51.47 Aligned_cols=32 Identities=28% Similarity=0.451 Sum_probs=28.6
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
..||.|||+|++|+.++..|++.|. .++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~------~V~~~~r 34 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGE------AINVLAR 34 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTC------CEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC------EEEEEEC
Confidence 4689999999999999999999997 7888764
No 441
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=81.43 E-value=6.1 Score=46.61 Aligned_cols=34 Identities=29% Similarity=0.302 Sum_probs=30.2
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
-.+|.|||+|..|..||.+|+.+|. .|+++|.+.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCH
Confidence 4689999999999999999999997 799988643
No 442
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=81.41 E-value=1.4 Score=47.04 Aligned_cols=35 Identities=17% Similarity=0.395 Sum_probs=29.0
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++|+|.| .|+||.++++.|+..|. +++++|.+
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~------~V~~~~r~ 47 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGA------VIHTCARN 47 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 4567888887 78999999999999997 78887643
No 443
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=81.40 E-value=1.5 Score=47.89 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=26.6
Q ss_pred cCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 511 DAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 511 ~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+++|+|.| .|.||+.+++.|+..|. ++++++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~------~v~~~~r 35 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGD------VELVLRT 35 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTT------EEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCC------eEEEEec
Confidence 46899999 59999999999999886 5666654
No 444
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=81.38 E-value=3.5 Score=45.91 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=29.7
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.||.|+|+|.+|..++..|+..|++ ..++++|-+
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~----~el~l~D~~ 34 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVA----KEVVMVDIK 34 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCS----SEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCC----CEEEEEeCc
Confidence 3799999999999999999999983 589998854
No 445
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=81.38 E-value=3.9 Score=43.12 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=27.9
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
+|.|||+|.+|..++++|...|+.-+.++|.+
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~ 33 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVR 33 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecC
Confidence 79999999999999999998888545788865
No 446
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=81.35 E-value=2 Score=46.26 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=28.9
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 39 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGA------KVTITGRH 39 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5567788887 68999999999999997 78887643
No 447
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=81.31 E-value=0.81 Score=50.24 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=29.2
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..||+|||+|++|+.++..|++.|. +++++|.+
T Consensus 2 ~mkI~iiGaGa~G~~~a~~L~~~g~------~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGTTIAYELQQSLP------HTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHHCT------TCEEEESS
T ss_pred CcEEEEECCCHHHHHHHHHHHHCCC------eEEEEEec
Confidence 3689999999999999999999996 78888865
No 448
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=81.28 E-value=2 Score=47.81 Aligned_cols=73 Identities=18% Similarity=0.123 Sum_probs=51.9
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHh-CCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEec
Q 001331 113 FASNILVSGMQGLGAEIAKNLILA-GVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTS 191 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvla-GVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~ 191 (1099)
...+|+|||+|..|...++.|... ++.+|+++|.+ |++..++++++.. .+.+...
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~---------------------~a~~la~~l~~~~-g~~~~~~-- 175 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY---------------------ASPEILERIGRRC-GVPARMA-- 175 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT---------------------CCHHHHHHHHHHH-TSCEEEC--
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc---------------------HHHHHHHHHHHhc-CCeEEEe--
Confidence 467899999999999999999874 79999999853 3344455554322 2344433
Q ss_pred CCChhhccCCcEEEEecCC
Q 001331 192 KLTKEQLSDFQAVVFTDIS 210 (1099)
Q Consensus 192 ~l~~~~l~~~dvVV~~~~~ 210 (1099)
++ ++.+.+.|+||.|+.+
T Consensus 176 ~~-~eav~~aDIVi~aT~s 193 (313)
T 3hdj_A 176 AP-ADIAAQADIVVTATRS 193 (313)
T ss_dssp CH-HHHHHHCSEEEECCCC
T ss_pred CH-HHHHhhCCEEEEccCC
Confidence 22 3567789999999865
No 449
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=81.24 E-value=1.6 Score=49.42 Aligned_cols=84 Identities=17% Similarity=0.334 Sum_probs=0.0
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHH-------HHHh
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAAS-------AATS 581 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~-------~l~~ 581 (1099)
|.+++|.|||+|.+|..+++.|...|+ +++.+|.... +.+.+.+ .+.+
T Consensus 162 l~gktvGIIG~G~IG~~vA~~l~~~G~------~V~~~dr~~~-------------------~~~~~~~~g~~~~~~l~e 216 (351)
T 3jtm_A 162 LEGKTIGTVGAGRIGKLLLQRLKPFGC------NLLYHDRLQM-------------------APELEKETGAKFVEDLNE 216 (351)
T ss_dssp STTCEEEEECCSHHHHHHHHHHGGGCC------EEEEECSSCC-------------------CHHHHHHHCCEECSCHHH
T ss_pred ccCCEEeEEEeCHHHHHHHHHHHHCCC------EEEEeCCCcc-------------------CHHHHHhCCCeEcCCHHH
Q ss_pred hCCCCeEEEEecccCcccccccchhhhcCCC---EEEEc
Q 001331 582 INPRLNIEALQNRVGPETENVFDDTFWENIT---CVINA 617 (1099)
Q Consensus 582 ~np~~~i~~~~~~v~~~~e~~~~~~~~~~~D---vVi~a 617 (1099)
+-....|.......++++.++++.+.++... ++||+
T Consensus 217 ll~~aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~ 255 (351)
T 3jtm_A 217 MLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNN 255 (351)
T ss_dssp HGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEEC
T ss_pred HHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEEC
No 450
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=81.22 E-value=6.1 Score=42.64 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=56.1
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccc-hHHHHHHHHHHhhCCCCeE
Q 001331 511 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQ-AKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 511 ~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~-~Ka~vaa~~l~~~np~~~i 588 (1099)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.- + .. .. .|+..+. .+. .+.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~--~---------~~--~~~~~~~~~~-~l~--~~~v-- 57 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN------PTYALVRKTI--T---------AA--NPETKEELID-NYQ--SLGV-- 57 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC------CEEEEECCSC--C---------SS--CHHHHHHHHH-HHH--HTTC--
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC------cEEEEECCCc--c---------cC--ChHHHHHHHH-HHH--hCCC--
Confidence 368999996 9999999999999997 6777654320 0 00 00 2332221 121 2333
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccCc--hHHHHHHHhhccccc
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALDN--VNARLYVDQRCLYFQ 635 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn--~~ar~~i~~~c~~~~ 635 (1099)
+.+...+... +.+ ...++++|+||++... ...-..+-+.|.+.+
T Consensus 58 ~~v~~D~~d~-~~l--~~~~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 58 ILLEGDINDH-ETL--VKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp EEEECCTTCH-HHH--HHHHTTCSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred EEEEeCCCCH-HHH--HHHHhCCCEEEECCcccccccHHHHHHHHHhcC
Confidence 4444555432 222 3567889999998764 233334445555544
No 451
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=81.14 E-value=2.9 Score=45.05 Aligned_cols=36 Identities=25% Similarity=0.405 Sum_probs=30.9
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCc
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDV 550 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~ 550 (1099)
|.+++++|.| .||||.++++.|+..|. +++++|.+.
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~------~V~~~~r~~ 40 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA------NVAIAAKSA 40 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEESCC
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC------EEEEEeccc
Confidence 4677888888 78999999999999997 789988654
No 452
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=81.06 E-value=1.9 Score=45.38 Aligned_cols=89 Identities=10% Similarity=0.083 Sum_probs=56.6
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
+.+|+|+|+|.+|..+++.|...| - ++++|.|.- ++ +.+. +++ ..
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g------~-v~vid~~~~-------------------~~----~~~~---~~~--~~ 53 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSE------V-FVLAEDENV-------------------RK----KVLR---SGA--NF 53 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSE------E-EEEESCGGG-------------------HH----HHHH---TTC--EE
T ss_pred CCEEEEECCChHHHHHHHHHHhCC------e-EEEEECCHH-------------------HH----HHHh---cCC--eE
Confidence 468999999999999999987654 3 678875421 11 1122 233 33
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQK 636 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~ 636 (1099)
+...... ...+...-++++|.||.++++......+...|+..+.
T Consensus 54 i~gd~~~--~~~l~~a~i~~ad~vi~~~~~d~~n~~~~~~a~~~~~ 97 (234)
T 2aef_A 54 VHGDPTR--VSDLEKANVRGARAVIVDLESDSETIHCILGIRKIDE 97 (234)
T ss_dssp EESCTTC--HHHHHHTTCTTCSEEEECCSCHHHHHHHHHHHHHHCS
T ss_pred EEcCCCC--HHHHHhcCcchhcEEEEcCCCcHHHHHHHHHHHHHCC
Confidence 4333332 1122222367899999999998887777777776544
No 453
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=81.01 E-value=5.2 Score=43.65 Aligned_cols=97 Identities=11% Similarity=0.115 Sum_probs=55.7
Q ss_pred cCcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCccc-chHHHHHHHHHHhhCCCCeE
Q 001331 511 DAKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIG-QAKSTVAASAATSINPRLNI 588 (1099)
Q Consensus 511 ~~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG-~~Ka~vaa~~l~~~np~~~i 588 (1099)
.++|+|.|+ |.+|..+++.|+..|. ++++++.+.- +-. ..|+..+.. +. .+. +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~R~~~--------------~~~~~~~~~~l~~-~~--~~~--v 58 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSH------PTFIYARPLT--------------PDSTPSSVQLREE-FR--SMG--V 58 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTC------CEEEEECCCC--------------TTCCHHHHHHHHH-HH--HTT--C
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCC------cEEEEECCcc--------------cccChHHHHHHHH-hh--cCC--c
Confidence 367999995 9999999999999986 6777764310 000 112222221 11 233 3
Q ss_pred EEEecccCcccccccchhhhcCCCEEEEccCch--HHHHHHHhhccccc
Q 001331 589 EALQNRVGPETENVFDDTFWENITCVINALDNV--NARLYVDQRCLYFQ 635 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~--~ar~~i~~~c~~~~ 635 (1099)
+.+...+.+. +.+ ...++++|+||++.... ..-..+-+.|.+.+
T Consensus 59 ~~v~~D~~d~-~~l--~~a~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 104 (321)
T 3c1o_A 59 TIIEGEMEEH-EKM--VSVLKQVDIVISALPFPMISSQIHIINAIKAAG 104 (321)
T ss_dssp EEEECCTTCH-HHH--HHHHTTCSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred EEEEecCCCH-HHH--HHHHcCCCEEEECCCccchhhHHHHHHHHHHhC
Confidence 4445555432 222 35678899999987643 22234444555544
No 454
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.00 E-value=0.91 Score=49.35 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=30.0
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+.+++++|+|+||+|..++..|+..|. +++++|.
T Consensus 117 l~~k~vlViGaGg~g~a~a~~L~~~G~------~V~v~~R 150 (271)
T 1nyt_A 117 RPGLRILLIGAGGASRGVLLPLLSLDC------AVTITNR 150 (271)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECS
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCC------EEEEEEC
Confidence 567899999999999999999999996 7888753
No 455
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=80.97 E-value=6 Score=42.57 Aligned_cols=41 Identities=24% Similarity=0.405 Sum_probs=32.6
Q ss_pred HHHHHHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 106 RETMRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 106 ~e~q~kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
...|..|.+++|+|.| .||+|.++++.|+..|. ++.++|.+
T Consensus 2 p~~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~ 43 (281)
T 3s55_A 2 PGSMADFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRC 43 (281)
T ss_dssp ----CTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CCcccccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCC
Confidence 3446678899999998 67999999999999997 68888864
No 456
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=80.95 E-value=0.21 Score=59.22 Aligned_cols=60 Identities=20% Similarity=0.378 Sum_probs=44.9
Q ss_pred CchhhhhhhcCHHHH------------------HHHhcCcEEEEcCCcchHHHHHHHHH----cCCCCC-CCccEEEecC
Q 001331 492 SRYDAQISVFGAKLQ------------------KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCG-NQGKLTITDD 548 (1099)
Q Consensus 492 ~Rydrqi~l~G~~~q------------------~~L~~~~v~vvG~GglG~evlk~La~----~Gv~~~-~~g~i~ivD~ 548 (1099)
+||...+.+|..+.| ++|.+.||++.|+|+-|+.+++.|.. .|+.-. ...+|+++|.
T Consensus 247 ~ryr~~ipvFnDDiqGTa~V~lAgllnAlki~gk~l~d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~ 326 (564)
T 1pj3_A 247 RKYREKYCTFNDDIQGTAAVALAGLLAAQKVISKPISEHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDK 326 (564)
T ss_dssp HHHTTTSSEEEHHHHHHHHHHHHHHHHHHHHHCCCGGGCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEET
T ss_pred HHhccCCCEeCCCCchHHHHHHHHHHHHHHHhCCcHhHcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeC
Confidence 566666667766544 46889999999999999999999996 785100 0168999998
Q ss_pred Ccc
Q 001331 549 DVI 551 (1099)
Q Consensus 549 D~I 551 (1099)
.-+
T Consensus 327 ~Gl 329 (564)
T 1pj3_A 327 YGL 329 (564)
T ss_dssp TEE
T ss_pred CCe
Confidence 654
No 457
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=80.95 E-value=1.2 Score=49.37 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=30.2
Q ss_pred HhcCcEEEEcCCcchHHHHHHHHHc-CCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVGSGALGCEFLKNVALM-GVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG~GglG~evlk~La~~-Gv~~~~~g~i~ivD~ 548 (1099)
....+|.|||+|..|..++++|+.. |+ .++++.|.
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~-----~~V~v~dr 168 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSF-----KEVRIWNR 168 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCC-----SEEEEECS
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCC-----cEEEEEcC
Confidence 4567899999999999999999987 87 68888763
No 458
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=80.93 E-value=1.7 Score=46.96 Aligned_cols=37 Identities=22% Similarity=0.352 Sum_probs=31.9
Q ss_pred HHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 507 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 507 ~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 6 ~~l~~k~~lVTGas~gIG~a~a~~l~~~G~------~V~~~~r~ 43 (281)
T 3s55_A 6 ADFEGKTALITGGARGMGRSHAVALAEAGA------DIAICDRC 43 (281)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECC
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC------eEEEEeCC
Confidence 357788899998 78999999999999998 78898864
No 459
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=80.91 E-value=4.5 Score=44.63 Aligned_cols=109 Identities=17% Similarity=0.253 Sum_probs=62.0
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHh-CCCcEEEEEec
Q 001331 114 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQEL-NNAVVLSTLTS 191 (1099)
Q Consensus 114 ~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eL-Np~V~v~~~~~ 191 (1099)
+.+|+|.| .|++|..+++.|+..|. +|+++|...-...+.. . ... ..+.+.++ .+. ++....
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~--------~-~~~----~~~~l~~~~~~~--~~~~~~ 65 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGG--------S-LPE----SLRRVQELTGRS--VEFEEM 65 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSS--------S-SBH----HHHHHHHHHTCC--CEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCccccccc--------c-cHH----HHHHHHhccCCc--eEEEEC
Confidence 46899998 59999999999999995 6777775321101100 0 011 12233332 233 344445
Q ss_pred CCCh-----hhcc--CCcEEEEecCC--H---------------HHHHHHHHHHHhcCCCc-eeEEEeecceeE
Q 001331 192 KLTK-----EQLS--DFQAVVFTDIS--L---------------DKAIEFDDFCHNHQPAI-SFIKAEVRGLFG 240 (1099)
Q Consensus 192 ~l~~-----~~l~--~~dvVV~~~~~--~---------------~~~~~ln~~c~~~~~~i-pfI~~~~~G~~G 240 (1099)
++++ +.+. ++|+||.+... . .....+-+.|++.+ + .||.+++.+.+|
T Consensus 66 D~~~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~iv~~SS~~~~g 137 (348)
T 1ek6_A 66 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG--VKNLVFSSSATVYG 137 (348)
T ss_dssp CTTCHHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGGC
T ss_pred CCCCHHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC--CCEEEEECcHHHhC
Confidence 5532 2344 68888876431 1 11234556777776 4 588877776655
No 460
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.90 E-value=2.2 Score=45.96 Aligned_cols=97 Identities=10% Similarity=0.033 Sum_probs=55.3
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRL 586 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~ 586 (1099)
.|.+++|+|.| .||||.++++.|+..|. +++++|.+.-. .+.-. ..-...+.+.++..+.... .
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~--~ 71 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGA------DIILFDICHDI----ETNEY---PLATSRDLEEAGLEVEKTG--R 71 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEEECCSCC----TTSCS---CCCCHHHHHHHHHHHHHTT--S
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCC------eEEEEcccccc----ccccc---chhhhHHHHHHHHHHHhcC--C
Confidence 46678899998 67999999999999998 78888854211 11000 0011233344444444443 3
Q ss_pred eEEEEecccCcccc--cccc--hhhhcCCCEEEEccC
Q 001331 587 NIEALQNRVGPETE--NVFD--DTFWENITCVINALD 619 (1099)
Q Consensus 587 ~i~~~~~~v~~~~e--~~~~--~~~~~~~DvVi~alD 619 (1099)
++..+...+..... ..+. .+-+...|++|++..
T Consensus 72 ~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg 108 (287)
T 3pxx_A 72 KAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG 108 (287)
T ss_dssp CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 56666666654321 1110 011347888888653
No 461
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=80.83 E-value=3.3 Score=45.85 Aligned_cols=68 Identities=21% Similarity=0.286 Sum_probs=43.8
Q ss_pred CHHHHHHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCC
Q 001331 105 GRETMRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNN 182 (1099)
Q Consensus 105 G~e~q~kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp 182 (1099)
|...|..|.+++|+|.| .||+|.++|+.|+..|. ++.++|.+.-. .+. ..-...+++...+.+.+..+
T Consensus 18 ~p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~ 86 (322)
T 3qlj_A 18 GPGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGL----DGS-----PASGGSAAQSVVDEITAAGG 86 (322)
T ss_dssp ----CCTTTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCT----TSS-----BTCTTSHHHHHHHHHHHTTC
T ss_pred CCchhcccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccc----ccc-----ccccHHHHHHHHHHHHhcCC
Confidence 34445678888999997 57999999999999997 78888764311 110 01123466666777766543
No 462
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=80.82 E-value=4.6 Score=42.36 Aligned_cols=35 Identities=37% Similarity=0.490 Sum_probs=30.0
Q ss_pred HhhcCeEEEEcC-ChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 111 RLFASNILVSGM-QGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 111 kL~~s~VlIiG~-gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
.|++++|+|.|+ ||+|.++++.|+..|. ++.++|.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r 46 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGR 46 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEec
Confidence 467889999984 8999999999999997 6888774
No 463
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=80.81 E-value=2.3 Score=45.98 Aligned_cols=36 Identities=22% Similarity=0.420 Sum_probs=27.5
Q ss_pred HHHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 507 KKLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 507 ~~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..|. ++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~------~V~~~~r~ 54 (272)
T 2nwq_A 18 SHMS-STLFITGATSGFGEACARRFAEAGW------SLVLTGRR 54 (272)
T ss_dssp ---C-CEEEESSTTTSSHHHHHHHHHHTTC------EEEEEESC
T ss_pred CCcC-cEEEEeCCCCHHHHHHHHHHHHCCC------EEEEEECC
Confidence 3455 6778887 78999999999999997 78887643
No 464
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=80.80 E-value=2.6 Score=45.66 Aligned_cols=36 Identities=14% Similarity=0.319 Sum_probs=28.9
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~------~V~~~~r~ 56 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGY------RVVIHYHN 56 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTC------EEEEEESS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC------eEEEEeCC
Confidence 46677888887 78999999999999997 78887643
No 465
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=80.79 E-value=1.7 Score=49.39 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=30.7
Q ss_pred hcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 113 FASNILVSGMQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 113 ~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
.+.+|+|+|+|++|..++.-+...|.+++..+|.
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~ 215 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARLAGATTVILSTR 215 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence 4679999999999999999999999999988874
No 466
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=80.74 E-value=1.8 Score=47.41 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=30.2
Q ss_pred HHhcCcEEEEcCCc-chHHHHHHHHHcCCCCCCCccEEEec
Q 001331 508 KLEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITD 547 (1099)
Q Consensus 508 ~L~~~~v~vvG~Gg-lG~evlk~La~~Gv~~~~~g~i~ivD 547 (1099)
.|.+++++|||.|+ +|..++..|+.+|. .+++++
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gA------tVtv~h 192 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGC------TVTVTH 192 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTC------EEEEEC
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCC------eEEEEe
Confidence 46788999999988 89999999999997 788875
No 467
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=80.73 E-value=0.37 Score=56.96 Aligned_cols=45 Identities=20% Similarity=0.331 Sum_probs=35.7
Q ss_pred HHHhcCcEEEEcCCcchHHHHHHHHH----cCCCCC-CCccEEEecCCcc
Q 001331 507 KKLEDAKVFIVGSGALGCEFLKNVAL----MGVSCG-NQGKLTITDDDVI 551 (1099)
Q Consensus 507 ~~L~~~~v~vvG~GglG~evlk~La~----~Gv~~~-~~g~i~ivD~D~I 551 (1099)
++|.+.||++.|+|+-|+.+++.|.. .|+.-. ...+|+++|..-+
T Consensus 278 k~l~d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~Gl 327 (555)
T 1gq2_A 278 NRLSDHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGL 327 (555)
T ss_dssp SCGGGCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEE
T ss_pred CChhhcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCCe
Confidence 47889999999999999999999998 785100 0169999998654
No 468
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.69 E-value=3.7 Score=44.14 Aligned_cols=38 Identities=32% Similarity=0.428 Sum_probs=32.1
Q ss_pred HHHhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 109 MRRLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 109 q~kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
|..|.+++|+|.| .||+|.++|+.|+..|. ++.++|..
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~ 43 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDIC 43 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEccc
Confidence 3467889999998 56999999999999997 68888754
No 469
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=80.69 E-value=2.3 Score=47.35 Aligned_cols=89 Identities=13% Similarity=0.073 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCc-------EEEE
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAV-------VLST 188 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V-------~v~~ 188 (1099)
+|.|||+|.+|+.++.+|+.+|. .++++| |...-.+.|++.-..+ .+.+
T Consensus 16 kI~iIG~G~mG~ala~~L~~~G~-~V~~~~-----------------------r~~~~~~~l~~~g~~~~~~~~~~~~~~ 71 (335)
T 1z82_A 16 RFFVLGAGSWGTVFAQMLHENGE-EVILWA-----------------------RRKEIVDLINVSHTSPYVEESKITVRA 71 (335)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEC-----------------------SSHHHHHHHHHHSCBTTBTTCCCCSEE
T ss_pred cEEEECcCHHHHHHHHHHHhCCC-eEEEEe-----------------------CCHHHHHHHHHhCCcccCCCCeeeEEE
Q ss_pred EecCCChhhccCCcEEEEecCCHHHHHHHHHHHHhcCCCceeEEEe
Q 001331 189 LTSKLTKEQLSDFQAVVFTDISLDKAIEFDDFCHNHQPAISFIKAE 234 (1099)
Q Consensus 189 ~~~~l~~~~l~~~dvVV~~~~~~~~~~~ln~~c~~~~~~ipfI~~~ 234 (1099)
... ..+ +..+|+||+|..+......+..+.. .+ ..+|++.
T Consensus 72 ~~~--~~~-~~~aDvVil~vk~~~~~~v~~~l~~-~~--~~vv~~~ 111 (335)
T 1z82_A 72 TND--LEE-IKKEDILVIAIPVQYIREHLLRLPV-KP--SMVLNLS 111 (335)
T ss_dssp ESC--GGG-CCTTEEEEECSCGGGHHHHHTTCSS-CC--SEEEECC
T ss_pred eCC--HHH-hcCCCEEEEECCHHHHHHHHHHhCc-CC--CEEEEEe
No 470
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=80.65 E-value=1.2 Score=49.28 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=29.9
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
..+|.|||+|.+|..+|++|...|. .++++|.+.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCH
Confidence 4689999999999999999999997 688887543
No 471
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=80.54 E-value=1.8 Score=49.18 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=39.0
Q ss_pred hhhhhhc--cCHHHH----HHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 97 HSRQLAV--YGRETM----RRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 97 YsRQi~l--~G~e~q----~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
|+|+++- |..... ..|.+++|.|||+|.+|..+|+.|...|..+|..+|..
T Consensus 141 ~~~~~~~g~W~~~~~~~~~~~l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~ 197 (364)
T 2j6i_A 141 AHEQIINHDWEVAAIAKDAYDIEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQ 197 (364)
T ss_dssp HHHHHHTTCCCHHHHHTTCCCSTTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSS
T ss_pred HHHHHHhCCCCcCcccCCcccCCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4444443 764322 35899999999999999999999999998668888753
No 472
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=80.51 E-value=5.5 Score=41.99 Aligned_cols=35 Identities=29% Similarity=0.376 Sum_probs=30.0
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeC
Q 001331 111 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDE 146 (1099)
Q Consensus 111 kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~ 146 (1099)
+|.+++|+|.| .||+|.++++.|+..|. ++.++|.
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r 41 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADI 41 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 46788999998 58999999999999997 5888774
No 473
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=80.47 E-value=7.4 Score=46.03 Aligned_cols=34 Identities=15% Similarity=0.177 Sum_probs=28.8
Q ss_pred cCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 114 ASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 114 ~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
..+|||.| .|.+|..+++.|...|. +|+.++...
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~-~V~~l~R~~ 181 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGH-EVIQLVRKE 181 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCC
Confidence 45899999 68999999999999997 788887643
No 474
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=80.44 E-value=1.4 Score=48.17 Aligned_cols=78 Identities=12% Similarity=0.216 Sum_probs=53.4
Q ss_pred HhcCcEEEEcCCc-chHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCe
Q 001331 509 LEDAKVFIVGSGA-LGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLN 587 (1099)
Q Consensus 509 L~~~~v~vvG~Gg-lG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~ 587 (1099)
|.+++++|||.|. +|..+++.|...|. +.++++++..+
T Consensus 156 l~gk~vvVvG~s~iVG~p~A~lL~~~g~----~atVtv~h~~t------------------------------------- 194 (281)
T 2c2x_A 156 IAGAHVVVIGRGVTVGRPLGLLLTRRSE----NATVTLCHTGT------------------------------------- 194 (281)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHTSTTT----CCEEEEECTTC-------------------------------------
T ss_pred CCCCEEEEECCCcHHHHHHHHHHhcCCC----CCEEEEEECch-------------------------------------
Confidence 6678999999997 59999999998841 14788874111
Q ss_pred EEEEecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEEcCcC
Q 001331 588 IEALQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLESGTL 644 (1099)
Q Consensus 588 i~~~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~sgt~ 644 (1099)
.++ .+...++|+||.|+-.+. ++..-.++.+.-+||.|+.
T Consensus 195 ------------~~L--~~~~~~ADIVI~Avg~p~---~I~~~~vk~GavVIDVgi~ 234 (281)
T 2c2x_A 195 ------------RDL--PALTRQADIVVAAVGVAH---LLTADMVRPGAAVIDVGVS 234 (281)
T ss_dssp ------------SCH--HHHHTTCSEEEECSCCTT---CBCGGGSCTTCEEEECCEE
T ss_pred ------------hHH--HHHHhhCCEEEECCCCCc---ccCHHHcCCCcEEEEccCC
Confidence 111 355789999999987554 2444444555556676654
No 475
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=80.38 E-value=1.5 Score=47.17 Aligned_cols=35 Identities=14% Similarity=0.406 Sum_probs=28.8
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.|.+++++|.| .||||.++++.|+..|. +++++|.
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~------~V~~~~~ 50 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGA------KVVVNYA 50 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCC------EEEEEcC
Confidence 35677888887 67999999999999998 7777653
No 476
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=80.37 E-value=2.6 Score=45.84 Aligned_cols=90 Identities=17% Similarity=0.205 Sum_probs=0.0
Q ss_pred eEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCCCh
Q 001331 116 NILVSGMQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKLTK 195 (1099)
Q Consensus 116 ~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l~~ 195 (1099)
+|.|||+|.+|..++.+|...|. +++++| |.....+.+.+.. .....-.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~-----------------------~~~~~~~~~~~~g------~~~~~~~~ 56 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSD-----------------------RNPEAIADVIAAG------AETASTAK 56 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEEC-----------------------SCHHHHHHHHHTT------CEECSSHH
T ss_pred eEEEECchHHHHHHHHHHHhCCC-EEEEEe-----------------------CCHHHHHHHHHCC------CeecCCHH
Q ss_pred hhccCCcEEEEecC-CHHHHHHH---HHHHHhcCCCceeEEEee
Q 001331 196 EQLSDFQAVVFTDI-SLDKAIEF---DDFCHNHQPAISFIKAEV 235 (1099)
Q Consensus 196 ~~l~~~dvVV~~~~-~~~~~~~l---n~~c~~~~~~ipfI~~~~ 235 (1099)
+.+.++|+||+|.. +......+ .++.....+...+|.+.+
T Consensus 57 ~~~~~~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~ 100 (299)
T 1vpd_A 57 AIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSS 100 (299)
T ss_dssp HHHHHCSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred HHHhCCCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCC
No 477
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=80.34 E-value=1 Score=49.46 Aligned_cols=32 Identities=22% Similarity=0.457 Sum_probs=29.2
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.+|.|||+|.+|+.++..|+..|. +++++|.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~------~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGH------TVVLVDQT 47 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC------eEEEEECC
Confidence 479999999999999999999997 88999865
No 478
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=80.17 E-value=0.74 Score=51.63 Aligned_cols=51 Identities=18% Similarity=0.173 Sum_probs=39.4
Q ss_pred hhhhhhc--cCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 97 HSRQLAV--YGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 97 YsRQi~l--~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
|+|+.+- |.......|.+++|.|||+|.+|..+|+.|...|. +|+.+|...
T Consensus 121 ~~~~~~~g~W~~~~~~~l~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~dr~~ 173 (324)
T 3hg7_A 121 YREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGM-KVLGVSRSG 173 (324)
T ss_dssp HHHHHHTTCCCCCCCCCSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred HHHHHhhCCCcCCCCcccccceEEEEEECHHHHHHHHHHHhCCC-EEEEEcCCh
Confidence 4444432 54333357899999999999999999999999998 788888654
No 479
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=80.14 E-value=1.8 Score=46.75 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=28.8
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.|.++.++|.| .||||.++++.|+..|. +++++|.
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~------~V~~~~~ 60 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGA------KVAVNYA 60 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeC
Confidence 36677888887 68999999999999998 7777653
No 480
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=80.10 E-value=3.1 Score=48.10 Aligned_cols=36 Identities=19% Similarity=0.337 Sum_probs=32.3
Q ss_pred HHhcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++|.|||+|.+|..+++.|...|+ +++..|..
T Consensus 153 el~gktvGIIGlG~IG~~vA~~l~~~G~------~V~~yd~~ 188 (416)
T 3k5p_A 153 EVRGKTLGIVGYGNIGSQVGNLAESLGM------TVRYYDTS 188 (416)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC------EEEEECTT
T ss_pred cCCCCEEEEEeeCHHHHHHHHHHHHCCC------EEEEECCc
Confidence 4678899999999999999999999998 88888864
No 481
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=80.08 E-value=5.5 Score=43.76 Aligned_cols=104 Identities=12% Similarity=0.220 Sum_probs=60.4
Q ss_pred CeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEEecCC
Q 001331 115 SNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTLTSKL 193 (1099)
Q Consensus 115 s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~~~~l 193 (1099)
.+|||.| .|++|..+++.|...|. +|+++|...-. ......+.|... + .+.....++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~------------------~~~~~~~~l~~~-~--~~~~~~~Dl 59 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRK------------------GATDNLHWLSSL-G--NFEFVHGDI 59 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCST------------------THHHHHHHHHTT-C--CCEEEECCT
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCC-EEEEEeCCCcc------------------CchhhhhhhccC-C--ceEEEEcCC
Confidence 4799998 68999999999999995 78887742100 011112233221 2 234444455
Q ss_pred Ch-----hhccC--CcEEEEecCC--H-------H--------HHHHHHHHHHhcCCCceeEEEeecceeE
Q 001331 194 TK-----EQLSD--FQAVVFTDIS--L-------D--------KAIEFDDFCHNHQPAISFIKAEVRGLFG 240 (1099)
Q Consensus 194 ~~-----~~l~~--~dvVV~~~~~--~-------~--------~~~~ln~~c~~~~~~ipfI~~~~~G~~G 240 (1099)
.+ +.+.+ +|+||.+... . . ....+-+.|++.+.+..||.+++.+.+|
T Consensus 60 ~d~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g 130 (347)
T 1orr_A 60 RNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYG 130 (347)
T ss_dssp TCHHHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGT
T ss_pred CCHHHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhC
Confidence 32 23445 8888876431 1 1 1234567788877211488877776654
No 482
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=80.07 E-value=1.1 Score=47.06 Aligned_cols=33 Identities=30% Similarity=0.401 Sum_probs=30.1
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
...|+|||+|..|++.+..|++.|+ +++|+|..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~------~v~lie~~ 35 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGV------RVGLLTQS 35 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC------CEEEEESC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC------CEEEEecC
Confidence 4589999999999999999999998 89999875
No 483
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=80.05 E-value=2.9 Score=46.90 Aligned_cols=31 Identities=26% Similarity=0.290 Sum_probs=24.5
Q ss_pred CCCEEEEccCchHHHHHHHhhcccccccEEE
Q 001331 610 NITCVINALDNVNARLYVDQRCLYFQKPLLE 640 (1099)
Q Consensus 610 ~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~ 640 (1099)
..|+|++|+-+.......-..|.+.+|.++.
T Consensus 66 ~iDvVve~t~~~~~a~~~~~~AL~aGKhVVt 96 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLVLPALEAGIPLIT 96 (332)
T ss_dssp TCSEEEECCCCSHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHcCCeEEE
Confidence 8999999999885444455578889999984
No 484
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=80.04 E-value=4.3 Score=44.76 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=27.8
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+||-+||+|..|..+++||+..|. .+++.|.
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~~~G~------~v~v~dr 34 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLLKAGY------LLNVFDL 34 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC------EEEEECS
T ss_pred CEEEEeeehHHHHHHHHHHHhCCC------eEEEEcC
Confidence 479999999999999999999998 7888764
No 485
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=80.04 E-value=1.1 Score=48.30 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=27.0
Q ss_pred CcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 512 AKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 512 ~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
.+|+|.| .|.||..+++.|+..|. ++++++.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~------~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEY------DIYPFDK 37 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTE------EEEEECT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCC------EEEEecc
Confidence 3799999 59999999999999886 7888875
No 486
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=80.03 E-value=1.1 Score=48.61 Aligned_cols=89 Identities=12% Similarity=0.061 Sum_probs=0.0
Q ss_pred CcEEEEcC-CcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 512 AKVFIVGS-GALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 512 ~~v~vvG~-GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
.+|+|.|+ |.||+.+++.|+ .|. +++++|.+. ..
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~------~V~~~~r~~--------------------------------------~~ 35 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVG------NLIALDVHS--------------------------------------KE 35 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTS------EEEEECTTC--------------------------------------SS
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCC------eEEEecccc--------------------------------------cc
Q ss_pred EecccCcccccccchhhhcC--CCEEEEccC-----------------chHHHHHHHhhcccccccEEEcCcCcccc
Q 001331 591 LQNRVGPETENVFDDTFWEN--ITCVINALD-----------------NVNARLYVDQRCLYFQKPLLESGTLGAKC 648 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~--~DvVi~alD-----------------n~~ar~~i~~~c~~~~~Pli~sgt~G~~G 648 (1099)
+...+.....-. +.+++ +|+||++.. |+.+-..+-+.|...++.+|..++.+.+|
T Consensus 36 ~~~D~~d~~~~~---~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~ 109 (299)
T 1n2s_A 36 FCGDFSNPKGVA---ETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFP 109 (299)
T ss_dssp SCCCTTCHHHHH---HHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSC
T ss_pred ccccCCCHHHHH---HHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEe
No 487
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=80.01 E-value=5.1 Score=44.38 Aligned_cols=76 Identities=12% Similarity=0.102 Sum_probs=48.8
Q ss_pred eEEEEcC-ChHHHHHHHHHHHhCC-CeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhC----CCcEEEEE
Q 001331 116 NILVSGM-QGLGAEIAKNLILAGV-KSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELN----NAVVLSTL 189 (1099)
Q Consensus 116 ~VlIiG~-gglG~EiaKnLvlaGV-g~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLN----p~V~v~~~ 189 (1099)
||+|+|+ |.+|+.++..|+..|. .++.|+|... ...|++.....|.... ..+.+...
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~-----------------~~~~~~~~~~dl~~~~~~~~~~~~i~~~ 64 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH-----------------SINKLEGLREDIYDALAGTRSDANIYVE 64 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG-----------------GHHHHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCC-----------------chhhhHHHHHHHHHhHHhcCCCeEEEeC
Confidence 7999999 9999999999998886 5589888400 0123443333333332 34466553
Q ss_pred ecCCChhhccCCcEEEEecC
Q 001331 190 TSKLTKEQLSDFQAVVFTDI 209 (1099)
Q Consensus 190 ~~~l~~~~l~~~dvVV~~~~ 209 (1099)
.+.+ .+.+.+.|+||.+..
T Consensus 65 ~d~l-~~al~gaD~Vi~~Ag 83 (313)
T 1hye_A 65 SDEN-LRIIDESDVVIITSG 83 (313)
T ss_dssp ETTC-GGGGTTCSEEEECCS
T ss_pred Ccch-HHHhCCCCEEEECCC
Confidence 2222 345789999998753
No 488
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=80.00 E-value=5.4 Score=47.28 Aligned_cols=96 Identities=11% Similarity=0.122 Sum_probs=0.0
Q ss_pred hcCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHh-hCCCCeE
Q 001331 510 EDAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATS-INPRLNI 588 (1099)
Q Consensus 510 ~~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~-~np~~~i 588 (1099)
...+|.|||+|..|+.++.+|+..|. +++++|.+. ..++.+.+ ..++..+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~------~V~v~dr~~-----------------------~~~~~l~~~~~~~~gi 59 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGF------TVCAYNRTQ-----------------------SKVDHFLANEAKGKSI 59 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC------CEEEECSSS-----------------------HHHHHHHHTTTTTSSE
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCC------EEEEEeCCH-----------------------HHHHHHHcccccCCCe
Q ss_pred EEEecccCcccccccchhhhcC---CCEEEEccCc-hHHHHHHHhhcccc--cccEEEcCcC
Q 001331 589 EALQNRVGPETENVFDDTFWEN---ITCVINALDN-VNARLYVDQRCLYF--QKPLLESGTL 644 (1099)
Q Consensus 589 ~~~~~~v~~~~e~~~~~~~~~~---~DvVi~alDn-~~ar~~i~~~c~~~--~~Pli~sgt~ 644 (1099)
...... .++.++ .|+||.|+-. ...+..+..+.... +..+|+.++.
T Consensus 60 ~~~~s~----------~e~v~~l~~aDvVil~Vp~~~~v~~vl~~l~~~l~~g~iIId~s~~ 111 (497)
T 2p4q_A 60 IGATSI----------EDFISKLKRPRKVMLLVKAGAPVDALINQIVPLLEKGDIIIDGGNS 111 (497)
T ss_dssp ECCSSH----------HHHHHTSCSSCEEEECCCSSHHHHHHHHHHGGGCCTTCEEEECSCC
T ss_pred EEeCCH----------HHHHhcCCCCCEEEEEcCChHHHHHHHHHHHHhCCCCCEEEECCCC
No 489
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=80.00 E-value=4.4 Score=44.85 Aligned_cols=63 Identities=14% Similarity=0.284 Sum_probs=44.1
Q ss_pred HhhcCeEEEEc-CChHHHHHHHHHHHhCCCeEEEEeCCccCcccCCcccccCCCcccchHHHHHHHHHHHhCCCcEEEEE
Q 001331 111 RLFASNILVSG-MQGLGAEIAKNLILAGVKSVTLHDEGTVELWDLSSNFVFSDNDIGKNRALASVQKLQELNNAVVLSTL 189 (1099)
Q Consensus 111 kL~~s~VlIiG-~gglG~EiaKnLvlaGVg~itlvD~d~V~~~dL~~qf~~~~~diGk~Kaea~~~~L~eLNp~V~v~~~ 189 (1099)
.|.+++|||.| .||+|.++++.|+..|. +|.++|.+ ..+.+.+.+.+....+...+..+
T Consensus 5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~ 64 (319)
T 3ioy_A 5 DFAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIR-------------------QDSIDKALATLEAEGSGPEVMGV 64 (319)
T ss_dssp CCTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESC-------------------HHHHHHHHHHHHHHTCGGGEEEE
T ss_pred CCCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECC-------------------HHHHHHHHHHHHhcCCCCeEEEE
Confidence 35678899998 58999999999999997 57777642 23555566666665554445555
Q ss_pred ecCC
Q 001331 190 TSKL 193 (1099)
Q Consensus 190 ~~~l 193 (1099)
..++
T Consensus 65 ~~Dl 68 (319)
T 3ioy_A 65 QLDV 68 (319)
T ss_dssp ECCT
T ss_pred ECCC
Confidence 4444
No 490
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=79.94 E-value=1.8 Score=46.97 Aligned_cols=94 Identities=13% Similarity=0.111 Sum_probs=56.5
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEE
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEA 590 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~ 590 (1099)
..+|.|||+|.+|+.+++.|+..|.+ -+++++|.+. .+.+.+. +.. +....
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~----~~V~~~d~~~-------------------~~~~~~~----~~g--~~~~~ 56 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPH----YKIVGYNRSD-------------------RSRDIAL----ERG--IVDEA 56 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTT----SEEEEECSSH-------------------HHHHHHH----HTT--SCSEE
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCC----cEEEEEcCCH-------------------HHHHHHH----HcC--Ccccc
Confidence 35899999999999999999999751 2677776432 1222111 111 10000
Q ss_pred EecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcc---cccccEEEcCc
Q 001331 591 LQNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCL---YFQKPLLESGT 643 (1099)
Q Consensus 591 ~~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~---~~~~Pli~sgt 643 (1099)
..+. .+.+++.|+||-|+-....+..+..+.. ..+..+++.++
T Consensus 57 -----~~~~-----~~~~~~aDvVilavp~~~~~~v~~~l~~~~l~~~~ivi~~~~ 102 (290)
T 3b1f_A 57 -----TADF-----KVFAALADVIILAVPIKKTIDFIKILADLDLKEDVIITDAGS 102 (290)
T ss_dssp -----ESCT-----TTTGGGCSEEEECSCHHHHHHHHHHHHTSCCCTTCEEECCCS
T ss_pred -----cCCH-----HHhhcCCCEEEEcCCHHHHHHHHHHHHhcCCCCCCEEEECCC
Confidence 0111 2345789999999987777766666532 23455665443
No 491
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=79.93 E-value=1.3 Score=48.78 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=30.0
Q ss_pred cCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 114 ASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 114 ~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
..+|.|||+|.+|..++++|...|. .++++|.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~ 48 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRI 48 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTT-CEEEECSST
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCH
Confidence 4689999999999999999999996 788888644
No 492
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=79.87 E-value=1.8 Score=45.71 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=29.1
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDD 548 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~ 548 (1099)
+.+++|+|.| .||||.++++.|+..|. +++++|.
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~------~V~~~~r 46 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS------KVIISGS 46 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEES
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC------EEEEEcC
Confidence 4567899998 68999999999999997 7888774
No 493
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=79.87 E-value=0.65 Score=51.87 Aligned_cols=51 Identities=14% Similarity=0.076 Sum_probs=39.1
Q ss_pred hhhhhh--ccCHHHHHHhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCCc
Q 001331 97 HSRQLA--VYGRETMRRLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEGT 148 (1099)
Q Consensus 97 YsRQi~--l~G~e~q~kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d~ 148 (1099)
|+|+.+ -|.......|.+++|.|||+|.+|..+|+.|...|. ++..+|...
T Consensus 120 ~~~~~~~g~W~~~~~~~l~g~tvGIiG~G~IG~~vA~~l~~~G~-~V~~~dr~~ 172 (315)
T 3pp8_A 120 YQALKNQALWKPLPEYTREEFSVGIMGAGVLGAKVAESLQAWGF-PLRCWSRSR 172 (315)
T ss_dssp HHHHHHTTCCCCCCCCCSTTCCEEEECCSHHHHHHHHHHHTTTC-CEEEEESSC
T ss_pred HHHHHHhcccCCCCCCCcCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCc
Confidence 444443 264333456889999999999999999999999998 688888643
No 494
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=79.80 E-value=1.2 Score=47.98 Aligned_cols=35 Identities=31% Similarity=0.421 Sum_probs=28.3
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
-..++|+|.| .|.||+.+++.|+..|. +++++|.+
T Consensus 10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~V~~~~r~ 45 (292)
T 1vl0_A 10 HHHMKILITGANGQLGREIQKQLKGKNV------EVIPTDVQ 45 (292)
T ss_dssp --CEEEEEESTTSHHHHHHHHHHTTSSE------EEEEECTT
T ss_pred cccceEEEECCCChHHHHHHHHHHhCCC------eEEeccCc
Confidence 3456899998 69999999999999886 78888754
No 495
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=79.77 E-value=2.2 Score=45.32 Aligned_cols=36 Identities=17% Similarity=0.380 Sum_probs=30.9
Q ss_pred HHhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+|.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~------~V~~~~r~ 39 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGA------TVIVSDIN 39 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC------EEEEECSC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 46778899998 58999999999999998 78888754
No 496
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=79.71 E-value=3.9 Score=44.62 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=30.0
Q ss_pred HHhcCcEEEEcCC-c--chHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 508 KLEDAKVFIVGSG-A--LGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 508 ~L~~~~v~vvG~G-g--lG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
.|.+++++|.|++ + ||.++++.|+..|. +++++|.+
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~------~V~~~~r~ 66 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGA------ELAFTYQG 66 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTC------EEEEEECS
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCC------EEEEEcCC
Confidence 4778899999973 4 99999999999998 78887743
No 497
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=79.63 E-value=4.2 Score=43.27 Aligned_cols=85 Identities=15% Similarity=0.225 Sum_probs=0.0
Q ss_pred CcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCCccccccCCcccccccCcccchHHHHHHHHHHhhCCCCeEEEE
Q 001331 512 AKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDDVIEKSNLSRQFLFRDWNIGQAKSTVAASAATSINPRLNIEAL 591 (1099)
Q Consensus 512 ~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D~Ie~sNLnRQflf~~~diG~~Ka~vaa~~l~~~np~~~i~~~ 591 (1099)
.+|.|||+|.+|..+++.|+..|. .++++ |....|++.+++..
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~------~v~~~-------------------~~~~~~~~~~~~~~------------ 46 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPH------ELIIS-------------------GSSLERSKEIAEQL------------ 46 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSC------EEEEE-------------------CSSHHHHHHHHHHH------------
T ss_pred cEEEEECCCHHHHHHHHHHHhCCC------eEEEE-------------------CCCHHHHHHHHHHc------------
Q ss_pred ecccCcccccccchhhhcCCCEEEEccCchHHHHHHHhhcccccccEEE
Q 001331 592 QNRVGPETENVFDDTFWENITCVINALDNVNARLYVDQRCLYFQKPLLE 640 (1099)
Q Consensus 592 ~~~v~~~~e~~~~~~~~~~~DvVi~alDn~~ar~~i~~~c~~~~~Pli~ 640 (1099)
...+..+.+ +.+++.|+||.|+-....+..+..+. .++.+++
T Consensus 47 g~~~~~~~~-----~~~~~~D~Vi~~v~~~~~~~v~~~l~--~~~~vv~ 88 (259)
T 2ahr_A 47 ALPYAMSHQ-----DLIDQVDLVILGIKPQLFETVLKPLH--FKQPIIS 88 (259)
T ss_dssp TCCBCSSHH-----HHHHTCSEEEECSCGGGHHHHHTTSC--CCSCEEE
T ss_pred CCEeeCCHH-----HHHhcCCEEEEEeCcHhHHHHHHHhc--cCCEEEE
No 498
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=79.60 E-value=1.6 Score=47.83 Aligned_cols=36 Identities=19% Similarity=0.410 Sum_probs=32.7
Q ss_pred HhhcCeEEEEcCChHHHHHHHHHHHhCCCeEEEEeCC
Q 001331 111 RLFASNILVSGMQGLGAEIAKNLILAGVKSVTLHDEG 147 (1099)
Q Consensus 111 kL~~s~VlIiG~gglG~EiaKnLvlaGVg~itlvD~d 147 (1099)
.|.+++|+|+|+|++|..+++.|...|. +++++|..
T Consensus 152 ~l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~ 187 (293)
T 3d4o_A 152 TIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARE 187 (293)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECC
Confidence 4678999999999999999999999998 89999863
No 499
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=79.56 E-value=1.7 Score=46.99 Aligned_cols=35 Identities=20% Similarity=0.383 Sum_probs=28.9
Q ss_pred HhcCcEEEEc-CCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 509 LEDAKVFIVG-SGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 509 L~~~~v~vvG-~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
+.+++++|.| .||||.++++.|+..|. +++++|.+
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~------~V~~~~r~ 62 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGC------KVIVNYAN 62 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC------EEEEEESS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC------EEEEEeCC
Confidence 5567788887 78999999999999997 77777643
No 500
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=79.56 E-value=1.1 Score=49.90 Aligned_cols=34 Identities=21% Similarity=0.322 Sum_probs=30.6
Q ss_pred cCcEEEEcCCcchHHHHHHHHHcCCCCCCCccEEEecCC
Q 001331 511 DAKVFIVGSGALGCEFLKNVALMGVSCGNQGKLTITDDD 549 (1099)
Q Consensus 511 ~~~v~vvG~GglG~evlk~La~~Gv~~~~~g~i~ivD~D 549 (1099)
..||.|||+|.+|+.++..|+..|. ..++++|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~-----~~V~l~D~~ 37 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNL-----ADVVLFDIA 37 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-----CEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-----ceEEEEeCC
Confidence 3589999999999999999999998 579999865
Done!