Query 001333
Match_columns 1097
No_of_seqs 275 out of 1301
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 22:45:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001333.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001333hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ols_A Phosphoenolpyruvate syn 100.0 5.9E-48 2E-52 476.3 25.9 291 779-1096 2-336 (794)
2 1vbg_A Pyruvate,orthophosphate 100.0 1.4E-38 4.9E-43 393.4 12.7 244 780-1096 3-342 (876)
3 1kbl_A PPDK, pyruvate phosphat 100.0 1.1E-37 3.9E-42 385.2 10.9 242 781-1096 2-338 (873)
4 1h6z_A Pyruvate phosphate diki 100.0 6.9E-37 2.4E-41 377.3 9.7 266 780-1096 4-367 (913)
5 2x0s_A Pyruvate phosphate diki 100.0 3.3E-35 1.1E-39 366.6 9.0 267 780-1096 4-367 (913)
6 3t05_A Pyruvate kinase, PK; te 95.6 0.021 7.3E-07 68.9 8.8 93 646-744 501-595 (606)
7 2e28_A Pyruvate kinase, PK; al 95.2 0.011 3.9E-07 71.1 4.7 96 646-748 482-580 (587)
8 2ols_A Phosphoenolpyruvate syn 94.6 0.013 4.3E-07 73.3 2.7 99 645-751 363-467 (794)
9 2laa_A Beta/alpha-amylase; SBD 94.1 0.2 7E-06 47.4 9.3 69 94-184 13-82 (104)
10 2c3v_A Alpha-amylase G-6; carb 94.0 0.24 8E-06 46.8 9.5 64 97-182 21-85 (102)
11 1vbg_A Pyruvate,orthophosphate 93.7 0.031 1.1E-06 70.3 3.7 102 644-750 397-511 (876)
12 1h6z_A Pyruvate phosphate diki 93.6 0.056 1.9E-06 68.1 5.6 76 644-723 422-501 (913)
13 1kbl_A PPDK, pyruvate phosphat 93.4 0.032 1.1E-06 70.1 3.2 102 644-750 393-507 (873)
14 1zym_A Enzyme I; phosphotransf 93.3 0.048 1.6E-06 59.4 3.9 75 672-752 153-232 (258)
15 2wqd_A Phosphoenolpyruvate-pro 88.2 0.38 1.3E-05 58.0 5.2 75 672-752 155-234 (572)
16 2hwg_A Phosphoenolpyruvate-pro 88.1 0.38 1.3E-05 58.0 5.1 75 672-752 153-232 (575)
17 2x0s_A Pyruvate phosphate diki 87.6 0.3 1E-05 61.9 4.1 75 645-723 423-501 (913)
18 2hi6_A UPF0107 protein AF0055; 30.7 1.3E+02 0.0045 29.8 7.8 102 646-753 7-135 (141)
19 1ow5_A Serine/threonine-protei 25.5 13 0.00044 33.9 -0.4 57 348-417 14-71 (85)
20 2la2_A Cecropin, papiliocin; a 25.1 19 0.00065 27.9 0.5 11 311-321 11-21 (38)
No 1
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=100.00 E-value=5.9e-48 Score=476.29 Aligned_cols=291 Identities=23% Similarity=0.361 Sum_probs=237.2
Q ss_pred CCceeEeCCCCCC---CccchhhHhHHHhhhhCC-CcccCCCceeeCHHHHHHHHHhccchhHHHHHHHHHhhhCCCChH
Q 001333 779 RGKYAVSVEDFTP---DMVGAKSCNIKFLRERVP-SWIKIPTSVAIPFGAFETVLSENINKDIANKISRLYKFINGGDLS 854 (1097)
Q Consensus 779 ~~~~vl~l~e~~~---~~VGgKAanLg~L~~~lp-~g~~VP~GfvIpfgafe~fL~~~~n~~L~~~L~~l~~~l~~~d~~ 854 (1097)
++++++++++.+. .++|||++||++|.+.++ .|++||+||+||+++|++|++++ ++++.|...++.++.++..
T Consensus 2 ~~~~v~~~~~~~~~~~~~vGGK~anL~em~~~L~~~GlpVP~GF~Itt~a~~~fl~~~---~l~~~i~~~l~~l~~~~~~ 78 (794)
T 2ols_A 2 ADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGGFATTAEAYRAFLAHN---GLSERISAALAKLDVEDVA 78 (794)
T ss_dssp --CCEEEGGGCCGGGHHHHHHHHHHHHHHHHHHGGGTCCCCCEEEECHHHHHHHHTGG---GHHHHHHHHHHSCCTTSHH
T ss_pred CCCEEEECCcCChhhcccCCHHHHHHHHHHHHHhhCCCCCCCEEEECHHHHHHHHHhC---ChHHHHHHHHHhhcccCHH
Confidence 4578999998754 689999999999987443 58999999999999999999987 7888888887777777765
Q ss_pred HH----HHHHHHHHcCCCCHHHHHHHHHHHHh----------------cC-------CCCCCCc-------cHHHHHHHH
Q 001333 855 KL----QEIQEAVLQMSAPLSLIYELKNKMRS----------------SG-------MPWPGDE-------GWNLAWRSI 900 (1097)
Q Consensus 855 ~L----~~IR~~I~~~~lP~eL~~eL~~A~RS----------------Sg-------~s~AG~~-------g~e~l~~AI 900 (1097)
.| .++|++|+++++|+++.++|.++++. |+ .+|||++ +.++++.||
T Consensus 79 ~l~~~~~~ir~~I~~~~~p~~l~~~i~~a~~~l~~~~g~~~~~vaVRSSa~~EDl~~~sfAG~~~t~l~v~g~~~l~~Ai 158 (794)
T 2ols_A 79 ELARVGKEIRQWILDTPFPEQLDAEIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLDNVKEAM 158 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTSSCCCCEEEEEEECC-------CCSCSCEEEEECSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhccccccCceEEEecCCChhhhhhhhhhhhhhhhhcCCCHHHHHHHH
Confidence 44 78999999999999999999887632 21 3689987 599999999
Q ss_pred HHHHhcCCChHHHHHHHHcCCCCcccceEEEEEeeecCc--eeEEEEecCCCCCCCcchhhhccccccccccccccCCCc
Q 001333 901 KKVWASKWNERAFISCRKANLNHDNLCMAVLIQETICGD--YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAM 978 (1097)
Q Consensus 901 K~VWASlfn~RAv~yRr~~Gi~~~~v~MAVLVQemV~ad--~SGVlfT~nP~tgd~~~i~Iea~~GLGEtLVsG~~Gtpd 978 (1097)
|+||||+||+||+.||+.+|++++++.|||+||+||.++ +|||+||+||.||+.+.++|+++|||||.||+|.+ +|+
T Consensus 159 k~v~aS~~s~RAi~YR~~~gi~~~~~~mAV~VQ~MV~~~~s~sGV~FT~dP~tG~~~~~~I~a~~GlGE~vV~G~~-tpd 237 (794)
T 2ols_A 159 HHVFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVFVTSSYGLGENVVQGAV-NPD 237 (794)
T ss_dssp HHHHHHTTCHHHHHHHHHHCC--CCCCEEEEEEECCCTTSSEEEEEESSCTTTCCCSEEEEEEEESCTHHHHHTSS-CCE
T ss_pred HHHHHhcCCHHHHHHHHHcCCChHHhCceEEEEEcccCCceeEEEEEeCCCCCCCCceEEEEeccCCCceeecCCc-CCc
Confidence 999999999999999999999999999999999999999 99999999999999999999999999999999998 899
Q ss_pred eEEEecCCCC--CCcccccccccccccCCceEEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccch
Q 001333 979 SFVTKKNNLK--SPIVTCYPSKLIGLYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQT 1056 (1097)
Q Consensus 979 ~f~v~K~~~~--~~~vl~~~sk~i~~~~~~~~i~rsdsnGedLe~~ag~Gl~~svp~~~~~~~~vdy~~~plLtD~~~r~ 1056 (1097)
.|.++|++.. ...+ ..+.++.+ ...+++.. +++ .+|.+..++++++. ++.++|+|++
T Consensus 238 ~~~v~kp~l~~~~~~i---~~~~~~~k-~~~~~~~~--~~~------~g~~~~~~~~p~~~------~~~~~L~d~~--- 296 (794)
T 2ols_A 238 EFYVFKPTLKAGKPAI---LRKTMGSK-HIKMIFTD--KAE------AGKSVTNVDVPEED------RNRFSITDEE--- 296 (794)
T ss_dssp EEEEEHHHHHTTSCCE---EEEECCCC-CEEEEECS--CCS------SSTTEEEEECCHHH------HTSCSSCHHH---
T ss_pred EEEEeccccccCCcce---eeeecccc-ceeEEecc--ccc------CCCeeEEEeCCHHH------hcCCCCCHHH---
Confidence 9999983210 0122 23444443 22344422 111 12335567776543 4679999988
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEEECC--eEEEEeeccC
Q 001333 1057 SVFSKIAETGKIIESLYGYPQDIEGVLKDG--LIYVVQARPQ 1096 (1097)
Q Consensus 1057 ~ll~~La~lg~~IE~~fG~PQDIEWai~~g--~LyILQaRPq 1096 (1097)
+.+|++++..||++||.||||||+++++ +|||||+||+
T Consensus 297 --~~~L~~~~~~lE~~yg~pqDIEwai~~~~g~L~iLQaRP~ 336 (794)
T 2ols_A 297 --ITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQARPE 336 (794)
T ss_dssp --HHHHHHHHHHHHHHHTSCEEEEEEECTTTCCEEEEEEEEC
T ss_pred --HHHHHHHHHHHHHHcCCCeEEEEEEECCCCeEEEEEecCc
Confidence 7899999999999999999999999976 9999999996
No 2
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=100.00 E-value=1.4e-38 Score=393.38 Aligned_cols=244 Identities=17% Similarity=0.195 Sum_probs=189.7
Q ss_pred CceeEeC----CCCC---CCccchhhHhHHHhhhhCCCcccCCCceeeCHHHHHHHHHhc--cchhHHHHHHHHHhhhC-
Q 001333 780 GKYAVSV----EDFT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFIN- 849 (1097)
Q Consensus 780 ~~~vl~l----~e~~---~~~VGgKAanLg~L~~~lp~g~~VP~GfvIpfgafe~fL~~~--~n~~L~~~L~~l~~~l~- 849 (1097)
.+||+++ ++.+ .+++|||++||++|.+ .|+|||+||+||+++|++|++++ ..+++++.|....+.++
T Consensus 3 ~~~v~~f~~~~~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~Itt~a~~~~~~~~~~~~~~l~~~i~~~l~~le~ 79 (876)
T 1vbg_A 3 KKRVFHFGKGKSEGNKTMKELLGGKGANLAEMAS---IGLSVPPGFTVSTEACQQYQDAGCALPAGLWAEIVDGLQWVEE 79 (876)
T ss_dssp CCSEEEEETTEESSCTTCTTTTHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHHTTSCCCTTHHHHHHHHHHHHHH
T ss_pred CcEEEECCccccccCccccccCcHHHHHHHHHHH---CCCCCCCeEEECHHHHHHHHHhcccccHHHHHHHHHHHHHHHH
Confidence 4688999 6653 5789999999999998 69999999999999999999876 23466666655443332
Q ss_pred -----CCChH-------------HHHHHHHHHHcCCCCHHHHHHHHHH---------HH---------------------
Q 001333 850 -----GGDLS-------------KLQEIQEAVLQMSAPLSLIYELKNK---------MR--------------------- 881 (1097)
Q Consensus 850 -----~~d~~-------------~L~~IR~~I~~~~lP~eL~~eL~~A---------~R--------------------- 881 (1097)
.+|.+ .+..++++|+++++|++++++|.++ ||
T Consensus 80 ~~~~~~gd~~~plllsvrs~a~~smpgm~~tIln~~lpd~~~~~l~~~~~~~fA~d~yrr~~q~~~~~~~~vr~~~f~~~ 159 (876)
T 1vbg_A 80 YMGATLGDPQRPLLLSVRSGAAVSMPGMMDTVLNLGLNDEVAAGLAAKSGERFAYDSFRRFLDMFGNVVMDIPRSLFEEK 159 (876)
T ss_dssp HHTCBTTCSSSBCCEEEECCCSSCCTTCCCCEEEETCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred hhccccCCCcccccceecccccccchhHHHHHHcCCCCHHHHHHHHHhhccchHHHHHHHHHhhccceeeecChhhHHHH
Confidence 12211 1246788999999999999999852 22
Q ss_pred -------------hcC---------CCCCCCc-----------cHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCcccce
Q 001333 882 -------------SSG---------MPWPGDE-----------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCM 928 (1097)
Q Consensus 882 -------------SSg---------~s~AG~~-----------g~e~l~~AIK~VWASlfn~RAv~yRr~~Gi~~~~v~M 928 (1097)
||. .+|+|.| .+++++.|||+||||+||+||+.||+.+|++++ ..|
T Consensus 160 ~~~~~~~~~v~~~ss~taEDl~~~~~sf~~~y~~~~g~~fp~d~~~qL~~Ai~~v~aS~~~~RAi~YR~~~gi~~~-~~~ 238 (876)
T 1vbg_A 160 LEHMKESKGLKNDTDLTASDLKELVGQYKEVYLSAKGEPFPSDPKKQLELAVLAVFNSWESPRAKKYRSINQITGL-RGT 238 (876)
T ss_dssp HHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHHTTTCCCC-CCC
T ss_pred HHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHhccCCHHHHHHHHhcCCCch-hCc
Confidence 111 1122222 258999999999999999999999999999998 799
Q ss_pred EEEEEeeecCc-----eeEEEEecCCCCCCCcchhhhccccccccccccccCCCceEEEecCCCCCCccccccccccccc
Q 001333 929 AVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLY 1003 (1097)
Q Consensus 929 AVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~Iea~~GLGEtLVsG~~Gtpd~f~v~K~~~~~~~vl~~~sk~i~~~ 1003 (1097)
||+||+||.++ .|||+||+||.||+++.+-.-.+.|+||.||+|.+ +|+.|.+ +
T Consensus 239 AV~VQ~MV~g~~g~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VVsG~~-tPd~~~~----------l---------- 297 (876)
T 1vbg_A 239 AVNVQCMVFGNMGNTSGTGVLFTRNPNTGEKKLYGEFLVNAQGEDVVAGIR-TPEDLDA----------M---------- 297 (876)
T ss_dssp CEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESSCHHHHHHTSC-CCEETHH----------H----------
T ss_pred eEEEEEeccCCCCCCeeEEEEEeCCCCCCCcccceEEEEecCchhhhcCCc-Ccchhhh----------h----------
Confidence 99999999886 89999999999999863222346679999999977 6654321 0
Q ss_pred CCceEEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEEE
Q 001333 1004 GKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVL 1083 (1097)
Q Consensus 1004 ~~~~~i~rsdsnGedLe~~ag~Gl~~svp~~~~~~~~vdy~~~plLtD~~~r~~ll~~La~lg~~IE~~fG~PQDIEWai 1083 (1097)
+ + +.++ .+.+|++++..||++||.||||||++
T Consensus 298 ----------------~----------------~-----------~~p~-----~~~~L~~~~~~lE~hy~~pqDIEfti 329 (876)
T 1vbg_A 298 ----------------K----------------N-----------LMPQ-----AYDELVENCNILESHYKEMQDIEFTV 329 (876)
T ss_dssp ----------------H----------------H-----------HCHH-----HHHHHHHHHHHHHHHHCSCEEEEEEE
T ss_pred ----------------c----------------c-----------cCHH-----HHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 0 0 0112 26899999999999999999999999
Q ss_pred ECCeEEEEeeccC
Q 001333 1084 KDGLIYVVQARPQ 1096 (1097)
Q Consensus 1084 ~~g~LyILQaRPq 1096 (1097)
++|+|||||+||.
T Consensus 330 ~~g~L~iLQ~Rp~ 342 (876)
T 1vbg_A 330 QENRLWMLQCRTG 342 (876)
T ss_dssp ETTEEEEEEEEEC
T ss_pred ECCEEEEEEeccc
Confidence 9999999999996
No 3
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=100.00 E-value=1.1e-37 Score=385.25 Aligned_cols=242 Identities=20% Similarity=0.326 Sum_probs=186.4
Q ss_pred ceeEeCCCCCC---CccchhhHhHHHhhhhCCCcccCCCceeeCHHHHHHHHHhc--cchhHHHHHHHHHhhhCC-----
Q 001333 781 KYAVSVEDFTP---DMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN--INKDIANKISRLYKFING----- 850 (1097)
Q Consensus 781 ~~vl~l~e~~~---~~VGgKAanLg~L~~~lp~g~~VP~GfvIpfgafe~fL~~~--~n~~L~~~L~~l~~~l~~----- 850 (1097)
++|+++++.+. +++|||++||++|.+ .|+|||+||+||+++|++|++++ ..+++++.|....+.++.
T Consensus 2 ~~v~~f~~~~~~~~~~vGGKganL~em~~---~glpVP~GF~ITt~a~~~~~~~~~~~p~~l~~~i~~~l~~le~~~~~~ 78 (873)
T 1kbl_A 2 KWVYKFEEGNASMRNLLGGKGCNLAEMTI---LGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKK 78 (873)
T ss_dssp CCEEEGGGCCGGGHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTSC
T ss_pred CeEEECcCCChhhhhhCcHHHHHHHHHHh---CCCCCCCEEEEcHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHhccc
Confidence 58899988754 689999999999998 69999999999999999999876 234566666655443320
Q ss_pred -CC---h----------HHHHHHHHHHHcCCCCHHHHHHHHH----------HHH-------------------------
Q 001333 851 -GD---L----------SKLQEIQEAVLQMSAPLSLIYELKN----------KMR------------------------- 881 (1097)
Q Consensus 851 -~d---~----------~~L~~IR~~I~~~~lP~eL~~eL~~----------A~R------------------------- 881 (1097)
++ + ..+.-+++.|+++.+|++++++|.+ +||
T Consensus 79 fg~~~~pl~lsvRS~a~~SmpGm~dtiLn~~l~d~~~~~l~~~~g~~~fa~d~yrr~~~~~~~v~~~v~~~~f~~~~~~~ 158 (873)
T 1kbl_A 79 FGDTEDPLLVSVRSGARASMPGMMDTILNLGLNDVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAM 158 (873)
T ss_dssp BTCSSSCBCEEEEEECSSCCTTSSCEEEEETCCTTHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred cCCCCCchhHHHhhccccccccHHHHHHcCCCCHHHHHHHHHhhCCchHHHHHHHHHHhccCCceeeccchhHHHHHHHH
Confidence 11 1 0113347778888888888888874 122
Q ss_pred ---------hc----------------------CCCCCCCccHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCcccceEE
Q 001333 882 ---------SS----------------------GMPWPGDEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLCMAV 930 (1097)
Q Consensus 882 ---------SS----------------------g~s~AG~~g~e~l~~AIK~VWASlfn~RAv~yRr~~Gi~~~~v~MAV 930 (1097)
|+ |.+|| ++..++++.|||+||||+||+||+.||+.+|++++ ..|||
T Consensus 159 ~~~~~v~~ds~~taedl~~~~~~~~~~~~~~~~g~~fp-~dp~eqL~~Aik~V~aS~~~~RAi~YR~~~gi~~~-~~~AV 236 (873)
T 1kbl_A 159 KEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFP-QEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGD-WGTAV 236 (873)
T ss_dssp HHHTCCCSGGGCCHHHHHHHHHHHHHHHHTTTTTCCCC-CCHHHHHHHHHHHHHHHTTSHHHHHHHHHTTCCGG-GCCEE
T ss_pred HHhcCcCccCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-ccHHHHHHHHHHHHHhccCCHHHHHHHHHcCCCch-hCceE
Confidence 11 11111 11268999999999999999999999999999997 79999
Q ss_pred EEEeeecCc-----eeEEEEecCCCCCCCcchhhhccccccccccccccCCCceEEEecCCCCCCcccccccccccccCC
Q 001333 931 LIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGLYGK 1005 (1097)
Q Consensus 931 LVQemV~ad-----~SGVlfT~nP~tgd~~~i~Iea~~GLGEtLVsG~~Gtpd~f~v~K~~~~~~~vl~~~sk~i~~~~~ 1005 (1097)
+||+||.++ .|||+||+||.||+++.+-.-.+.|+||.||+|.+ +|+.|.+ +
T Consensus 237 ~VQ~MV~g~~~~~s~sGV~FT~nP~tG~~~~~g~~li~a~GE~VV~G~~-tPd~~~~-------------------l--- 293 (873)
T 1kbl_A 237 NVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVR-TPQPITQ-------------------L--- 293 (873)
T ss_dssp EEEECCCTTSSTTCEEEEEEEECTTTCCEEEEEEEEESCCHHHHHHTSS-CCEEGGG-------------------H---
T ss_pred EEEEcccCCCCCceeEEEEEecCCCCCCcccceEEEecCCchhhhcCCc-Cchhhhh-------------------h---
Confidence 999999886 89999999999998763323346789999999976 6654211 0
Q ss_pred ceEEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEEEEC
Q 001333 1006 PSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGVLKD 1085 (1097)
Q Consensus 1006 ~~~i~rsdsnGedLe~~ag~Gl~~svp~~~~~~~~vdy~~~plLtD~~~r~~ll~~La~lg~~IE~~fG~PQDIEWai~~ 1085 (1097)
+ . ..++ .+.+|++++..||++||.||||||++++
T Consensus 294 --------------~----------------~-----------~~p~-----~~~~L~~~~~~lE~hy~~pqDIEfti~~ 327 (873)
T 1kbl_A 294 --------------E----------------N-----------DMPD-----CYKQFMDLAMKLEKHFRDMQDMEFTIEE 327 (873)
T ss_dssp --------------H----------------H-----------HCHH-----HHHHHHHHHHHHHHHHTSCEEEEEEEET
T ss_pred --------------c----------------c-----------cCHH-----HHHHHHHHHHHHHHHcCCCeEEEEEEEC
Confidence 0 0 0112 2789999999999999999999999999
Q ss_pred CeEEEEeeccC
Q 001333 1086 GLIYVVQARPQ 1096 (1097)
Q Consensus 1086 g~LyILQaRPq 1096 (1097)
|+|||||+||.
T Consensus 328 g~L~iLQtRp~ 338 (873)
T 1kbl_A 328 GKLYFLQTRNG 338 (873)
T ss_dssp TEEEEEEEEEC
T ss_pred CEEEEEEeccc
Confidence 99999999996
No 4
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=100.00 E-value=6.9e-37 Score=377.33 Aligned_cols=266 Identities=20% Similarity=0.230 Sum_probs=189.2
Q ss_pred CceeEeCCC----CC---CCccchhhHhHHHhhhhCCCcccCCCceeeCHHHHHHHHHhc-cchhHHHHHHHHHhhhC--
Q 001333 780 GKYAVSVED----FT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSEN-INKDIANKISRLYKFIN-- 849 (1097)
Q Consensus 780 ~~~vl~l~e----~~---~~~VGgKAanLg~L~~~lp~g~~VP~GfvIpfgafe~fL~~~-~n~~L~~~L~~l~~~l~-- 849 (1097)
.+||+++++ .+ .+++|||++||++|.+ .|+|||+||+||+++|++|++.+ ..+++++.|....+.++
T Consensus 4 ~k~v~~f~~~~~~~~~~~~~llGgKganL~em~~---lglpVPpGF~Itteac~~~~~~~~~~~~l~~~i~~~l~~le~~ 80 (913)
T 1h6z_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 80 (913)
T ss_dssp CCCEEEECSSSCSCCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHTTTTTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcccCChhhHhhcChHhhhHHHHHH---CCCCCCCcEEeeHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 478999987 33 3689999999999998 69999999999999999999765 23455555544432221
Q ss_pred ----CCCh-------------HHHHHHHHHHHcCCCCHHHHHH-HH----------HHHHh----c-----CCC---C--
Q 001333 850 ----GGDL-------------SKLQEIQEAVLQMSAPLSLIYE-LK----------NKMRS----S-----GMP---W-- 887 (1097)
Q Consensus 850 ----~~d~-------------~~L~~IR~~I~~~~lP~eL~~e-L~----------~A~RS----S-----g~s---~-- 887 (1097)
.+|. ..+.-+++.|+++.++++.++. |. .+||. . |.+ |
T Consensus 81 ~g~~fg~~~~PLLvsvrsga~~smpGmmdtilnlGlnd~~~~~~la~~~g~~~fa~d~Yrrfiq~~~~vv~~v~~~~fe~ 160 (913)
T 1h6z_A 81 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 160 (913)
T ss_dssp HCCBTTCTTSBCCEEEEESCTTC-----CCCCSBSCCHHHHHHHGGGCGGGHHHHHHHHHHHHHHHHHHHHCCCSTTTST
T ss_pred hCcccCCCCCccceeeecccccccchHHHHHHhcCCCHHHHHHHHHHhcCChhHHHHHHHHHHHHhchhhcCCCHHHHHH
Confidence 1221 1235689999999999999998 52 12221 1 111 1
Q ss_pred ------------------------------------CC----CccHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCcccc
Q 001333 888 ------------------------------------PG----DEGWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLC 927 (1097)
Q Consensus 888 ------------------------------------AG----~~g~e~l~~AIK~VWASlfn~RAv~yRr~~Gi~~~~v~ 927 (1097)
.| ++-.++++.||+.||||+||+||+.||+.+|++++ ..
T Consensus 161 ~~~~~k~~~g~~~d~~~~a~dl~~~~~~yk~~~~~~~g~~fp~dp~eqL~~AI~~v~aS~~s~RAi~YR~~~gi~~~-~~ 239 (913)
T 1h6z_A 161 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-LG 239 (913)
T ss_dssp TTHHHHHHHSCSCGGGCCHHHHHHHHHTTHHHHHHHSSSCCCCCHHHHHHHHHHHHHHTTTCTTTTTHHHHSCCCSC-CC
T ss_pred HHHHHHHHcCCCcccCCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHhcCcHHHHHHHHHcCCChh-hc
Confidence 01 11278999999999999999999999999999995 89
Q ss_pred eEEEEEeeecCc-----eeEEEEecCCCCCCCcchhhhc-cccccccccccccCCCceEEEecCCCCCCccccccccccc
Q 001333 928 MAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEI-VKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIG 1001 (1097)
Q Consensus 928 MAVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~Iea-~~GLGEtLVsG~~Gtpd~f~v~K~~~~~~~vl~~~sk~i~ 1001 (1097)
|||+||+||.++ .|||+||+||.||+++ ++.++ +.||||.||+|.+ +|+.|++++.. .+ ..+.+.
T Consensus 240 mAV~VQ~MV~g~~~~~s~SGV~FT~dP~TG~~~-~~ge~li~alGE~VVsG~v-tPd~~~v~~~~----~~---~~~~i~ 310 (913)
T 1h6z_A 240 TAVNVQAMVFGNINDRSATGVAFSRSPSTGENF-FFGEYLVNAQGEDVVAGIR-TPQQINHSLSL----RW---AKAHGV 310 (913)
T ss_dssp CCEEEEECCCSCSSTTCEEEEEESSCSSSCCSS-CEEEEEESCCTTHHHHCCS-CCEESSHHHHH----HH---HTTSSC
T ss_pred ceEEEEEEeccCCCCcceeEEEEeCCCCCCCcc-eeeEEEEecCCchhccCCc-cCeEEEEeccc----ch---hhcccc
Confidence 999999999875 6999999999999865 32222 3359999999998 89988776431 01 011010
Q ss_pred ccCCceEEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEE
Q 001333 1002 LYGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEG 1081 (1097)
Q Consensus 1002 ~~~~~~~i~rsdsnGedLe~~ag~Gl~~svp~~~~~~~~vdy~~~plLtD~~~r~~ll~~La~lg~~IE~~fG~PQDIEW 1081 (1097)
.+ + . ....+ +..+.+++++ +.+|+++|..||+|||.||||||
T Consensus 311 ~~-------------~--------~---~~~~~---------~~l~~l~p~~-----~~eLa~~a~~lE~hyg~pqDIEw 352 (913)
T 1h6z_A 311 GE-------------E--------E---RRKRY---------PSMEEAMPEN-----YRLLCDVRKRLENHYRDMQDLEF 352 (913)
T ss_dssp CH-------------H--------H---HHHHS---------CCHHHHSHHH-----HHHHHHHHHHHHHHHTSCEEEEE
T ss_pred hh-------------h--------h---cccCc---------hhhhhcCHHH-----HHHHHHHHHHHHHHhCCCceEEE
Confidence 00 0 0 00000 0112344444 78999999999999999999999
Q ss_pred EEECCeEEEEeeccC
Q 001333 1082 VLKDGLIYVVQARPQ 1096 (1097)
Q Consensus 1082 ai~~g~LyILQaRPq 1096 (1097)
|+++|+|||||+||.
T Consensus 353 ai~~G~LyILQaRP~ 367 (913)
T 1h6z_A 353 TVQDGRLWLLQCRNG 367 (913)
T ss_dssp EEETTEEEEEEEEEC
T ss_pred EEECCEEEEEEecCc
Confidence 999999999999995
No 5
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=100.00 E-value=3.3e-35 Score=366.60 Aligned_cols=267 Identities=19% Similarity=0.188 Sum_probs=181.3
Q ss_pred CceeEeCC----CCC---CCccchhhHhHHHhhhhCCCcccCCCceeeCHHHHHHHHHhcc-chhHHHHHHHHHhhhC--
Q 001333 780 GKYAVSVE----DFT---PDMVGAKSCNIKFLRERVPSWIKIPTSVAIPFGAFETVLSENI-NKDIANKISRLYKFIN-- 849 (1097)
Q Consensus 780 ~~~vl~l~----e~~---~~~VGgKAanLg~L~~~lp~g~~VP~GfvIpfgafe~fL~~~~-n~~L~~~L~~l~~~l~-- 849 (1097)
.+||+.+. |.+ .++||||++|||+|.+ .|+|||+|||||+.+|++|++.+. .+.+.+.|......++
T Consensus 4 ~k~vy~F~~~~~e~~~~~~~LvGGKgAnLgEM~~---~GlpVP~GF~iTt~Ay~~fl~~~~l~~~i~~~l~~~l~~le~~ 80 (913)
T 2x0s_A 4 KKWVYYFGGGNADGNKNMKELLGGKGANLAEMVN---LGIPVPPGFTITTEACKTYQETETIPQEVADQVRENVSRVEKE 80 (913)
T ss_dssp CCCEEEECSSSCSSCTTCHHHHHHHHHHHHHHHH---TTCCCCCEEEECHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCCccCCcchhhhCcHHHHHHHHHHH---CcCCCCCCEeehHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH
Confidence 47899985 333 2589999999999998 699999999999999999998762 3445444433221110
Q ss_pred ----CCChH--------------------H-----H--HHHHHHHHcCC-----------------------CCHHHHHH
Q 001333 850 ----GGDLS--------------------K-----L--QEIQEAVLQMS-----------------------APLSLIYE 875 (1097)
Q Consensus 850 ----~~d~~--------------------~-----L--~~IR~~I~~~~-----------------------lP~eL~~e 875 (1097)
.+|.. . + ..++.++...+ ++.+..++
T Consensus 81 ~~~~~gd~~~pLl~sVRsga~~smpgmmdtilnlgln~~~v~~l~~~~~~~~~~a~d~Yrr~~~~y~~~v~~v~~~~fe~ 160 (913)
T 2x0s_A 81 MGAKFGDPANPLLFSVRSGAAASMPGMMDTVLNLGLNKVTVDAWVRRAPRLERFVYDSYRRFITMYADIVMQVGREDFEE 160 (913)
T ss_dssp HSCBTTCTTSBCCEEEEEECSCCC----CEEEEETCCHHHHTTTSTTCTTSHHHHHHHHHHHHHHHHHHHHCCCSHHHHH
T ss_pred hhhhhCCccccchheecccccccCCccchhHHhccccHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHhcCCChhhHHH
Confidence 01100 0 0 12222222222 22221122
Q ss_pred HHH---HHHhcCC-------CCCCCc------------------cHHHHHHHHHHHHhcCCChHHHHHHHHcCCCCcccc
Q 001333 876 LKN---KMRSSGM-------PWPGDE------------------GWNLAWRSIKKVWASKWNERAFISCRKANLNHDNLC 927 (1097)
Q Consensus 876 L~~---A~RSSg~-------s~AG~~------------------g~e~l~~AIK~VWASlfn~RAv~yRr~~Gi~~~~v~ 927 (1097)
+.. +.||++. +|+|+. .+++++.|||.||||+||+||+.||+.+|+++. +.
T Consensus 161 ~~~~~~~~rssa~~~dl~~as~a~~~~tyl~v~~~~~g~~fp~d~~~qL~~ai~~vfaSl~t~RAi~YR~~~g~~~~-~~ 239 (913)
T 2x0s_A 161 ALSRMKERRGTKFDTDLTASDLKELCDGYLELFELKTGCSFPQDPVMQLFAAIKAVFRSWGNPRATIYRRMNNITGL-LG 239 (913)
T ss_dssp HHHHHHHHHTCSCGGGCCHHHHHHHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHHHHHHHCHHHHTHHHHSCCCCC-CC
T ss_pred HHHHHHHhcCccccccCCHHHHHHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHHHHHHccCHHHHHHHHhcCCCcc-cc
Confidence 211 2255542 244432 268999999999999999999999999999985 99
Q ss_pred eEEEEEeeecCc-----eeEEEEecCCCCCCCcchhhhccccccccccccccCCCceEEEecCCCCCCcccccccccccc
Q 001333 928 MAVLIQETICGD-----YAFVIHTKNPLSGDNSEIYTEIVKGLGETLVGAYPGRAMSFVTKKNNLKSPIVTCYPSKLIGL 1002 (1097)
Q Consensus 928 MAVLVQemV~ad-----~SGVlfT~nP~tgd~~~i~Iea~~GLGEtLVsG~~Gtpd~f~v~K~~~~~~~vl~~~sk~i~~ 1002 (1097)
+||.||.||.++ .||||||+||.||++..+.+.+++||||.||+|.+ +|+.|...+... .+ ..+.++.
T Consensus 240 laV~VQ~MV~~~~~~~s~SGVmFT~dp~TG~~~~~~~~~~~glGE~VV~G~v-tPd~~~~~~~~~---~~---~~~~~~~ 312 (913)
T 2x0s_A 240 TAVNVQAMVFGNINDRSATGVAFSRSPSTGENFFFGEYLVNAQGEDVVAGIR-TPQQINHSLSLR---WA---KAHGVGE 312 (913)
T ss_dssp CEEEEEECCCSCSSTTCEEEEEESSCTTTCCSSCEEEEEESCCTTHHHHCSS-CCBCSSHHHHHH---HH---HTTTCCH
T ss_pred cceEEEEeeecccCccccceEEEecCCCCCCCcEEEEEccCCcCcccccCCC-CCcccccchhhh---hh---hhccccc
Confidence 999999999876 68999999999999999999999999999999998 898764332110 00 0010110
Q ss_pred cCCceEEeecCCCCcccccccCCCceeeeecCCccccccccCCCCCcCCcccchHHHHHHHHHHHHHHHhcCCCeeEEEE
Q 001333 1003 YGKPSIIFRSDSNGEDLEKYAGAGLYDSVIMNDPEKVVLDYSRDPMVGDKSFQTSVFSKIAETGKIIESLYGYPQDIEGV 1082 (1097)
Q Consensus 1003 ~~~~~~i~rsdsnGedLe~~ag~Gl~~svp~~~~~~~~vdy~~~plLtD~~~r~~ll~~La~lg~~IE~~fG~PQDIEWa 1082 (1097)
+ . ....|....-.. ......|++++..||.||+.||||||+
T Consensus 313 k--------------------------~--------~~~~~~~~~~~~-----p~~~~~l~~~~~~lE~hy~~~qdiE~a 353 (913)
T 2x0s_A 313 E--------------------------E--------RRKRYPSMEEAM-----PENYRLLCDVRKRLENHYRDMQDLEFT 353 (913)
T ss_dssp H--------------------------H--------HHHHSCCHHHHS-----HHHHHHHHHHHHHHHHHHSSCEEEEEE
T ss_pred c--------------------------c--------ccccccchhhhh-----HHHHHHHHHHHHHHHHhcCcHHHhHHH
Confidence 0 0 000010000001 123678999999999999999999999
Q ss_pred EECCeEEEEeeccC
Q 001333 1083 LKDGLIYVVQARPQ 1096 (1097)
Q Consensus 1083 i~~g~LyILQaRPq 1096 (1097)
+++|+||+||+||.
T Consensus 354 ~~~g~l~ilq~R~~ 367 (913)
T 2x0s_A 354 VQDGRLWLLQCRNG 367 (913)
T ss_dssp EETTEEEEEEEEEC
T ss_pred hcCCchHHHHhhhc
Confidence 99999999999973
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=95.61 E-value=0.021 Score=68.86 Aligned_cols=93 Identities=14% Similarity=0.164 Sum_probs=66.5
Q ss_pred EEeeeeeEEEEEEEecccccccccccCCCeEEEEeCCCCccccC--CCcEEEecCCCCCCcchhhhhcccCCceeeEecc
Q 001333 646 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFATCFD 723 (1097)
Q Consensus 646 qvispG~a~G~L~~V~~l~~~~~~~~~~p~Ill~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at~~d 723 (1097)
+.++||.+.|+++++....+.. .....+.||+++..+-++ +| ..+.||||..-. ..||.++.||++|||-+.--.
T Consensus 501 ~~i~~G~v~G~v~vv~~~~da~-~~~~~g~ILVa~~l~Ps~-~~~l~~v~GiVte~Gg-~tSHaAIlAR~lgIPaVvG~~ 577 (606)
T 3t05_A 501 QGIGRGSVVGTTLVAETVKDLE-GKDLSDKVIVTNSIDETF-VPYVEKALGLITEENG-ITSPSAIVGLEKGIPTVVGVE 577 (606)
T ss_dssp EEESSCEEEEEEEECSSGGGGS-SSCCSSEEEEESCCCTTT-HHHHTTSSEEEESSCC-SSSHHHHHHHHTTCCEEECCT
T ss_pred cccccceEEEEEEEECChHHHh-hcCCCCeEEEECCCCHHH-HHHHHhhEEEEecCCC-cccHHHHHHhhCCCCEEEecc
Confidence 4478999999999999876632 224568899998543322 33 279999998876 899999999999999865333
Q ss_pred hHHHHHHHhcCCCeEEEEEcC
Q 001333 724 QNILRNLRLKEGKAVSIRLKS 744 (1097)
Q Consensus 724 ~~~~~~l~~l~Gk~V~l~vs~ 744 (1097)
. ... .-.+|+.|.+....
T Consensus 578 ~-a~~--~l~~G~~V~vDg~~ 595 (606)
T 3t05_A 578 K-AVK--NISNNVLVTIDAAQ 595 (606)
T ss_dssp T-HHH--HSCSSCEEEEETTT
T ss_pred c-HHh--hCCCCCEEEEECCC
Confidence 1 222 23489998876654
No 7
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=95.23 E-value=0.011 Score=71.13 Aligned_cols=96 Identities=11% Similarity=0.114 Sum_probs=67.7
Q ss_pred EEeeeeeEEEEEEEecccccccccccCCCeEEEEeCCCCccccC--CCcEEEecCCCCCCcchhhhhcccCCceeeE-ec
Q 001333 646 QVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CF 722 (1097)
Q Consensus 646 qvispG~a~G~L~~V~~l~~~~~~~~~~p~Ill~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at-~~ 722 (1097)
..++||.+.|+++++....+.. .....|.||+++..+=++ +| ..+.||+|..-. ..||.++.||++|||-+. |.
T Consensus 482 ~~~~~g~~~G~v~v~~~~~~~~-~~~~~g~ILVa~~l~Ps~-~~~l~~~~Givt~~Gg-~tSHaAIlAR~lgIPaVvG~~ 558 (587)
T 2e28_A 482 QGIGRKSAFGKAVVAKTAEEAR-QKMVDGGILVTVSTDADM-MPAIEKAAAIITEEGG-LTSHAAVVGLSLGIPVIVGVE 558 (587)
T ss_dssp EEESSCEECCBEEECSSHHHHH-HHCCTTCEEEESCCCGGG-HHHHTTCSEEEESSCC-TTSHHHHHHHHHTCCEEECCT
T ss_pred ccccCCeEEeeEEEeCCHHHHh-hcCCCCeEEEECCCCHHH-HHHHHhcEEEEEcCCC-CcCHHHHHHHHcCCCEEEecc
Confidence 5579999999999998765421 123568899998433332 22 379999998766 899999999999999755 33
Q ss_pred chHHHHHHHhcCCCeEEEEEcCCceE
Q 001333 723 DQNILRNLRLKEGKAVSIRLKSTNLI 748 (1097)
Q Consensus 723 d~~~~~~l~~l~Gk~V~l~vs~~~~~ 748 (1097)
+ +...+ .+|+.|.+......+.
T Consensus 559 ~--~~~~l--~~G~~v~vDg~~G~V~ 580 (587)
T 2e28_A 559 N--ATTLF--KDGQEITVDGGFGAVY 580 (587)
T ss_dssp T--HHHHS--CTTCBEEEETTTTEEE
T ss_pred c--HHHhC--CCCCEEEEECCCCEEE
Confidence 3 23322 4799998866553333
No 8
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=94.56 E-value=0.013 Score=73.26 Aligned_cols=99 Identities=14% Similarity=0.124 Sum_probs=55.5
Q ss_pred cEEeeeeeEEEEEEEecccccccccccCCCeEEEEeCCCCccccC--CCcEEEecCCCCCCcchhhhhcccCCceeeE-e
Q 001333 645 WQVISPVEVCGFITSVNELITLQNKVYRRPTIIIASRITGEEEIP--VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT-C 721 (1097)
Q Consensus 645 wqvispG~a~G~L~~V~~l~~~~~~~~~~p~Ill~~~~~G~EEIP--~~VaGVit~~~~~~LSHv~VRARn~gVp~at-~ 721 (1097)
=..++||.+.|++++|...++.. ....+.|||++..+= +++| ..+.||||..-. ..||.+|.||++|||-+. |
T Consensus 363 G~~~~~g~~~G~v~~~~~~~~~~--~~~~g~ILv~~~~~p-~~~~~~~~~~givt~~Gg-~tSHaAivar~~giP~vvg~ 438 (794)
T 2ols_A 363 GRAIGQKVGQGKVRLIKDASEMD--SVEAGDVLVTDMTDP-DWEPVMKRASAIVTNRGG-RTCHAAIIARELGIPAVVGC 438 (794)
T ss_dssp CBC--CCCCCBCBC----------------CEEEESCCCG-GGSHHHHTCSEEEESSCC-TTCHHHHHTTC---CEEECC
T ss_pred ccccCCCcceEEEEEecCHHHHH--hcCCCeEEEECCCCH-HHHHHHhhCcEEEEcCCC-cccHHHHHHhHCCCCEEEcC
Confidence 35579999999998887766532 234577988884433 3344 279999998755 899999999999999855 4
Q ss_pred cchHHHHHHHhcCCCeEEE---EEcCCceEEee
Q 001333 722 FDQNILRNLRLKEGKAVSI---RLKSTNLIISD 751 (1097)
Q Consensus 722 ~d~~~~~~l~~l~Gk~V~l---~vs~~~~~l~~ 751 (1097)
.+ .... -.+|+.|.+ ..+...|...+
T Consensus 439 ~~--~~~~--~~~G~~v~v~c~Dg~~G~v~~g~ 467 (794)
T 2ols_A 439 GN--ATEL--LKNGQEVTVSCAEGDTGFIYAGL 467 (794)
T ss_dssp TT--HHHH--SCSSCCEECCCC--CCCBCEECC
T ss_pred cc--hhhc--ccCCCEEEEEecCCCcceEEeCC
Confidence 44 2232 247999998 66554444433
No 9
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=94.12 E-value=0.2 Score=47.40 Aligned_cols=69 Identities=16% Similarity=0.359 Sum_probs=48.1
Q ss_pred ccCCCeEEEeeeecCCCCcccCCCCCCCCCccccccceeeeeeeeccCCCcceeEEEEEccCCceeEEEEEEecC-Cccc
Q 001333 94 NMKGAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSG-GSWI 172 (1097)
Q Consensus 94 d~~~~lvLHWGv~~~~~~eW~~PP~~~~P~gS~~~~~A~eT~f~~~~~~~~~~~~lei~l~~~~~~gi~FVLk~~-~~W~ 172 (1097)
..-+.+.|||+. +.+.|..+|.. +|.+..-. -+...+|+++.. ..|+|+++++ ++|-
T Consensus 13 ~g~~~vylHyg~---~~g~Wt~~~~v---------------~M~~~~~~--gw~~~TI~l~~g--~~~~~~F~dG~~~WD 70 (104)
T 2laa_A 13 KGFNSPYIHYRP---AGGSWTAAPGV---------------KMQDAEIS--GYAKITVDIGSA--SQLEAAFNDGNNNWD 70 (104)
T ss_dssp CSSSSCEEEEEE---TTSCCCSSSCE---------------ECEEETTT--TEEEEEEECTTC--SCEEEEEECSSSCEE
T ss_pred CCCCcEEEEEcC---CCCCCCcCCcc---------------ccccccCC--CeEEEEEECCCC--CEEEEEEeCCCCcCc
Confidence 345579999992 33799988762 33332211 133467777642 6799999998 7999
Q ss_pred ccCCcceEEecC
Q 001333 173 KNNGENFFVGLH 184 (1097)
Q Consensus 173 kn~G~DF~V~l~ 184 (1097)
+|+|+||.++.-
T Consensus 71 Nn~g~Nyt~~~g 82 (104)
T 2laa_A 71 SNNTKNYSFSTG 82 (104)
T ss_dssp STTTSCEEECSE
T ss_pred CCCCccEEecCC
Confidence 999999999753
No 10
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=94.05 E-value=0.24 Score=46.82 Aligned_cols=64 Identities=17% Similarity=0.366 Sum_probs=45.2
Q ss_pred CCeEEEeeeecCCCCcccCCCCCCCCCccccccceeeeeeeeccCCCcceeEEEEEccCCceeEEEEEEecC-CcccccC
Q 001333 97 GAAILHWGISKCSPGEWLSPPPDMLPEKSKMVAGACQTYFTDIATARGSFQMVDVNLQKRKFVGIQFVIWSG-GSWIKNN 175 (1097)
Q Consensus 97 ~~lvLHWGv~~~~~~eW~~PP~~~~P~gS~~~~~A~eT~f~~~~~~~~~~~~lei~l~~~~~~gi~FVLk~~-~~W~kn~ 175 (1097)
...-|||++- .+.|..+|.- +|.+... .-+...+|+++. =..|+||++++ ++|-+|+
T Consensus 21 ~~~ylHy~~~---~g~Wt~vpgv---------------~M~~~~~--~Gw~~~TI~~~~--~~~l~~~F~dG~~~WDNN~ 78 (102)
T 2c3v_A 21 THPHIHYSLN---QGAWTTLPGV---------------PLTKSEX--EGXVKVTIEAEE--GSQLRAAFNNGSGQWDNNQ 78 (102)
T ss_dssp SSCEEEEEET---TCCBCCTTCE---------------ECEECSS--TTEEEEEECCCT--TCEEEEEEECSSSCEECGG
T ss_pred CcEEEEEeCC---CCCcccCCCc---------------Ccccccc--CCceEEEEecCC--CceEEEEEeCCCcccccCC
Confidence 4578999943 3799998772 3333211 112345677653 26999999998 7999999
Q ss_pred CcceEEe
Q 001333 176 GENFFVG 182 (1097)
Q Consensus 176 G~DF~V~ 182 (1097)
|.||.+.
T Consensus 79 g~Ny~~~ 85 (102)
T 2c3v_A 79 GRDYDFS 85 (102)
T ss_dssp GTCEEEE
T ss_pred CcceEEC
Confidence 9999996
No 11
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=93.68 E-value=0.031 Score=70.27 Aligned_cols=102 Identities=19% Similarity=0.261 Sum_probs=63.7
Q ss_pred CcEEeeeeeEEEEEEEecccccccc-cccCCCeEEEEeCCCCccccCC--CcEEEecCCCCCCcchhhhhcccCCceeeE
Q 001333 644 CWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT 720 (1097)
Q Consensus 644 ~wqvispG~a~G~L~~V~~l~~~~~-~~~~~p~Ill~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~at 720 (1097)
.=...+||.+.|++++ ..++... ....+|.|||.+..+= +++|- .+.||||..-. ..||.+|.||++|||-+.
T Consensus 397 ~G~~as~G~a~G~vv~--~~~~~~~~~~~g~~~ILV~~~t~P-~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~Vv 472 (876)
T 1vbg_A 397 TGLPASPGAAVGQVVF--TAEDAEAWHSQGKAAILVRAETSP-EDVGGMHAAVGILTERGG-MTSHAAVVARGWGKCCVS 472 (876)
T ss_dssp ECEEEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESCCCT-TSHHHHHHSSEEEESSCC-TTSHHHHHHHHTTCCEEE
T ss_pred cCcccCCCeEEEEEEE--CHHHHHHHhhccCCEEEEEcCCCH-HHHHhHhhccEEEECCCC-CccHHHHHHhHcCCCEEE
Confidence 3345799999999754 2222211 1234678998883222 22331 58899998766 899999999999999855
Q ss_pred -ecchHHHH--------HHH-hcCCCeEEEEEcCCceEEe
Q 001333 721 -CFDQNILR--------NLR-LKEGKAVSIRLKSTNLIIS 750 (1097)
Q Consensus 721 -~~d~~~~~--------~l~-~l~Gk~V~l~vs~~~~~l~ 750 (1097)
|.+.. ++ ... -.+|..|.+..+...|.+.
T Consensus 473 G~~~~~-~~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g 511 (876)
T 1vbg_A 473 GCSGIR-VNDAEKLVTIGGHVLREGEWLSLNGSTGEVILG 511 (876)
T ss_dssp CCTTEE-EEGGGTEEEETTEEEETTCEEEEETTTTEEEES
T ss_pred cCCCce-eccccceEEeCCeeecCCCEEEEECCCCEEEEC
Confidence 44420 00 011 2468888887665444443
No 12
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=93.56 E-value=0.056 Score=68.07 Aligned_cols=76 Identities=18% Similarity=0.232 Sum_probs=53.2
Q ss_pred CcEEeeeeeEEEEEEEeccccccccc-ccCCCeEEEEeCCCCccccCC--CcEEEecCCCCCCcchhhhhcccCCceeeE
Q 001333 644 CWQVISPVEVCGFITSVNELITLQNK-VYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT 720 (1097)
Q Consensus 644 ~wqvispG~a~G~L~~V~~l~~~~~~-~~~~p~Ill~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~at 720 (1097)
.=...+||.|+|++++ ..++.... ...+|.|||+...+ -+++|. .+.||||..-+ ..||.+|.||++|||-+.
T Consensus 422 ~G~~aspG~a~G~v~~--~~~~a~~~~~~ge~~ILV~~~t~-P~d~~~m~~a~GIvT~~GG-~TSHaAIvAR~lGiPaVv 497 (913)
T 1h6z_A 422 RGLAASPGAAVGQVVF--DAESAKEWSGRGKKVIMVRLETS-PEDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCVS 497 (913)
T ss_dssp ECEEEESCEEEEEEES--SHHHHHSTTTTSCCEEEEESSCC-GGGCTTTTTSSEEEESSCC-TTCHHHHHHHHTTCCEEE
T ss_pred cceecCCceEEEEEEE--CHHHHHHHHhcCCCEEEEECCCC-HHHHHhHHhceEEEEcCCC-cccHHHHHHHhcCCCEEE
Confidence 3455799999999763 22222211 23457788887544 344553 68999998876 889999999999999755
Q ss_pred -ecc
Q 001333 721 -CFD 723 (1097)
Q Consensus 721 -~~d 723 (1097)
|.+
T Consensus 498 G~~~ 501 (913)
T 1h6z_A 498 GCGD 501 (913)
T ss_dssp CCTT
T ss_pred CCcc
Confidence 544
No 13
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=93.40 E-value=0.032 Score=70.10 Aligned_cols=102 Identities=17% Similarity=0.189 Sum_probs=63.7
Q ss_pred CcEEeeeeeEEEEEEEecccccccc-cccCCCeEEEEeCCCCccccCC--CcEEEecCCCCCCcchhhhhcccCCceeeE
Q 001333 644 CWQVISPVEVCGFITSVNELITLQN-KVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFAT 720 (1097)
Q Consensus 644 ~wqvispG~a~G~L~~V~~l~~~~~-~~~~~p~Ill~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~at 720 (1097)
.=..++||.++|++++ ..++... ....+|.|||.+..+ -+++|- .+.||||..-. ..||.+|.||++|||-+.
T Consensus 393 ~G~~as~G~a~G~vv~--~~~~a~~~~~~g~~~ILV~~~t~-P~~~~~~~~a~GivT~~GG-~tSHaAIvAR~lGiP~Vv 468 (873)
T 1kbl_A 393 SALPASPGAAAGKVYF--TADEAKAAHEKGERVILVRLETS-PEDIEGMHAAEGILTVRGG-MTSHAAVVARGMGTCCVS 468 (873)
T ss_dssp ECEEEECSEEEEEEES--SHHHHHHHHHTTCCEEEEESSCC-GGGHHHHHHCSEEEESSCC-TTSHHHHHHHHHTCEEEE
T ss_pred cCccccCceEEEEEEE--cHHHHHHhhccCCCEEEEECCCC-HHHHHHHHhccEEEecCCC-CccHHHHHHhHcCCCEEE
Confidence 4455799999999854 2222211 123467798887322 222331 58899998766 899999999999999855
Q ss_pred -ecchHHHH--------HHH-hcCCCeEEEEEcCCceEEe
Q 001333 721 -CFDQNILR--------NLR-LKEGKAVSIRLKSTNLIIS 750 (1097)
Q Consensus 721 -~~d~~~~~--------~l~-~l~Gk~V~l~vs~~~~~l~ 750 (1097)
|.+.. ++ ... -.+|..|.+..+...|.+.
T Consensus 469 G~~~~~-i~~~~~~~~~~~~~l~~G~~vtvDG~~G~V~~g 507 (873)
T 1kbl_A 469 GCGEIK-INEEAKTFELGGHTFAEGDYISLDGSTGKIYKG 507 (873)
T ss_dssp CCTTCE-EETTTTEEEETTEEEETTCEEEEETTTCEEEES
T ss_pred cCCCce-ecccccEEEeCCeeecCCCEEEEECCCCEEEEC
Confidence 55420 00 011 2468888876665444443
No 14
>1zym_A Enzyme I; phosphotransferase; 2.50A {Escherichia coli} SCOP: a.60.10.1 c.8.1.2 PDB: 1eza_A 1ezb_A 1ezc_A 1ezd_A 2eza_A 2ezb_A 2ezc_A 3ezb_A 3eze_A 3eza_A
Probab=93.30 E-value=0.048 Score=59.43 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=50.6
Q ss_pred CCCeEEEEeCCCCccccC----CCcEEEecCCCCCCcchhhhhcccCCceeeE-ecchHHHHHHHhcCCCeEEEEEcCCc
Q 001333 672 RRPTIIIASRITGEEEIP----VGVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CFDQNILRNLRLKEGKAVSIRLKSTN 746 (1097)
Q Consensus 672 ~~p~Ill~~~~~G~EEIP----~~VaGVit~~~~~~LSHv~VRARn~gVp~at-~~d~~~~~~l~~l~Gk~V~l~vs~~~ 746 (1097)
..|.|||++..+=.+ ++ ..+.||||..-. ..||.++.||++|||-+. |.+ ....+ .+|..|.+......
T Consensus 153 ~~~~ILVa~~l~Ps~-~~~l~~~~~~givt~~Gg-~tSH~AIlAR~lgIPavvg~~~--~~~~~--~~G~~v~vDg~~G~ 226 (258)
T 1zym_A 153 QDEVILVAADLTPSE-TAQLNLKKVLGFITDAGG-RTSHTSIMARSLELPAIVGTGS--VTSQV--KNDDYLILDAVNNQ 226 (258)
T ss_dssp CSCEEEECSCCCHHH-HHHSCGGGEEEEECSCCC-SSSHHHHHHHHHTCCEECCCSC--HHHHC--CTTCEEEECCSSCC
T ss_pred CCCeEEEECCCCHHH-HHhhchhhcEEEEEcCCC-cccHHHHHHHHcCCCEEEechh--HHHhC--CCCCEEEEECCCCe
Confidence 467888887322111 11 169999997655 999999999999999755 444 23322 47999988776655
Q ss_pred eEEeec
Q 001333 747 LIISDI 752 (1097)
Q Consensus 747 ~~l~~~ 752 (1097)
+.+.+.
T Consensus 227 v~~~p~ 232 (258)
T 1zym_A 227 VYVNPT 232 (258)
T ss_dssp EEESCC
T ss_pred EEECcC
Confidence 655543
No 15
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=88.18 E-value=0.38 Score=57.98 Aligned_cols=75 Identities=15% Similarity=0.139 Sum_probs=51.3
Q ss_pred CCCeEEEEeCCCCccccCC----CcEEEecCCCCCCcchhhhhcccCCceeeE-ecchHHHHHHHhcCCCeEEEEEcCCc
Q 001333 672 RRPTIIIASRITGEEEIPV----GVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CFDQNILRNLRLKEGKAVSIRLKSTN 746 (1097)
Q Consensus 672 ~~p~Ill~~~~~G~EEIP~----~VaGVit~~~~~~LSHv~VRARn~gVp~at-~~d~~~~~~l~~l~Gk~V~l~vs~~~ 746 (1097)
..|.|||++..+=++ ++. .+.||||..-. ..||.+|.||++|||-+. |.+ .... -.+|..|.+.-+...
T Consensus 155 ~~~~ILVa~~l~P~~-~~~l~~~~~~Givt~~Gg-~tSHaAIvAR~lgIPaVvg~~~--~~~~--~~~G~~v~vDg~~G~ 228 (572)
T 2wqd_A 155 DESVVIVGNDLTPSD-TAQLNKEFVQGFATNIGG-RTSASAIMSRSLEIPAIVGTKS--ITQE--VKQGDMIIVDGLNGD 228 (572)
T ss_dssp SCCEEEEESCCCHHH-HTTCCTTTEEEEEESSCC-TTSHHHHHHHHTTCCEEECCSS--HHHH--CCTTCEEEEETTTTE
T ss_pred CCCEEEEEcCCCHHH-HHhhChhceeEEEEcCCC-cccHHHHHHHHcCCCEEEechh--HHhh--CCCCCEEEEECCCCE
Confidence 468898887322222 221 48999997665 899999999999999855 444 2332 247999998776655
Q ss_pred eEEeec
Q 001333 747 LIISDI 752 (1097)
Q Consensus 747 ~~l~~~ 752 (1097)
+.+.+.
T Consensus 229 V~~~p~ 234 (572)
T 2wqd_A 229 VIVNPT 234 (572)
T ss_dssp EEESCC
T ss_pred EEeCCc
Confidence 555443
No 16
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=88.07 E-value=0.38 Score=58.00 Aligned_cols=75 Identities=17% Similarity=0.201 Sum_probs=51.2
Q ss_pred CCCeEEEEeCCCCccccC---C-CcEEEecCCCCCCcchhhhhcccCCceeeE-ecchHHHHHHHhcCCCeEEEEEcCCc
Q 001333 672 RRPTIIIASRITGEEEIP---V-GVVAVLTPDMPDVLSHVSIRARNNKVCFAT-CFDQNILRNLRLKEGKAVSIRLKSTN 746 (1097)
Q Consensus 672 ~~p~Ill~~~~~G~EEIP---~-~VaGVit~~~~~~LSHv~VRARn~gVp~at-~~d~~~~~~l~~l~Gk~V~l~vs~~~ 746 (1097)
..|.|||++..+=++ ++ . .+.||||..-. ..||.+|.||++|||-+. |.+ .... -.+|..|.+..+...
T Consensus 153 ~~~~ILVa~~l~Ps~-~~~l~~~~~~Givt~~Gg-~tSHaAIvAR~lgIPaVvG~~~--~~~~--~~~G~~v~vDg~~G~ 226 (575)
T 2hwg_A 153 QDEVILVAADLTPSE-TAQLNLKKVLGFITDAGG-RTSHTSIMARSLELPAIVGTGS--VTSQ--VKNDDYLILDAVNNQ 226 (575)
T ss_dssp CSCEEEEESCCCHHH-HHTCCTTTEEEEEESSCC-TTSHHHHHHHHTTCCEEECCSC--HHHH--CCTTCEEEEETTTTE
T ss_pred CCCEEEEEcCCCHHH-HHHhCccceeEEEEcCCC-cccHHHHHHHHCCCCEEEcchh--HHhh--CCCCCEEEEECCCCE
Confidence 468899887322221 22 1 48999997665 899999999999999754 444 2232 247999998776655
Q ss_pred eEEeec
Q 001333 747 LIISDI 752 (1097)
Q Consensus 747 ~~l~~~ 752 (1097)
+.+.+.
T Consensus 227 V~~~p~ 232 (575)
T 2hwg_A 227 VYVNPT 232 (575)
T ss_dssp EEESCC
T ss_pred EEeCCc
Confidence 555443
No 17
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=87.61 E-value=0.3 Score=61.86 Aligned_cols=75 Identities=19% Similarity=0.216 Sum_probs=50.4
Q ss_pred cEEeeeeeEEEEEEEe-cccccccccccCCCeEEEEeCCCCccccCC--CcEEEecCCCCCCcchhhhhcccCCceee-E
Q 001333 645 WQVISPVEVCGFITSV-NELITLQNKVYRRPTIIIASRITGEEEIPV--GVVAVLTPDMPDVLSHVSIRARNNKVCFA-T 720 (1097)
Q Consensus 645 wqvispG~a~G~L~~V-~~l~~~~~~~~~~p~Ill~~~~~G~EEIP~--~VaGVit~~~~~~LSHv~VRARn~gVp~a-t 720 (1097)
=-..+||.|+|++++. ++..+.. ....+.|||.+..+ -+.+|- ...||||..-+ .-||.+|.||.+|||-+ .
T Consensus 423 Gl~aspG~a~G~v~~~~~~~~~~~--~~~~g~ILV~~~T~-Pd~~p~M~~a~gIvT~~GG-~TSHAAIvAR~LGIPaVVG 498 (913)
T 2x0s_A 423 GLAASPGAAVGQVVFDAESAKEWS--GRGKKVIMVRLETS-PEDLAGMDAACGILTARGG-MTSHAAVVARGMGKCCVSG 498 (913)
T ss_dssp CEEEESSEEEEEEESSHHHHHHHT--TTTCCEEEEESSCC-TTSHHHHTTSSEEEESSCC-TTCHHHHHHHTTTCCEEEC
T ss_pred ccccCCccceeeEEechhHHHHHh--hCCCceEEEcCCCC-HHHHHHHHHHHHHHHHccC-CCChHHHHHHHcCCCeecC
Confidence 3456999999998653 3333221 22345677776322 223442 57899998876 88999999999999984 4
Q ss_pred ecc
Q 001333 721 CFD 723 (1097)
Q Consensus 721 ~~d 723 (1097)
|.|
T Consensus 499 ~~~ 501 (913)
T 2x0s_A 499 CGD 501 (913)
T ss_dssp CTT
T ss_pred cch
Confidence 555
No 18
>2hi6_A UPF0107 protein AF0055; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Archaeoglobus fulgidus} SCOP: c.8.2.3
Probab=30.65 E-value=1.3e+02 Score=29.78 Aligned_cols=102 Identities=12% Similarity=0.159 Sum_probs=71.0
Q ss_pred EEeeeeeEEEEEEEecc-------cccccccc------c---CCCeEEEEeCCCCccccCC---------C--cEEEecC
Q 001333 646 QVISPVEVCGFITSVNE-------LITLQNKV------Y---RRPTIIIASRITGEEEIPV---------G--VVAVLTP 698 (1097)
Q Consensus 646 qvispG~a~G~L~~V~~-------l~~~~~~~------~---~~p~Ill~~~~~G~EEIP~---------~--VaGVit~ 698 (1097)
+.|++|.|.|.+.+.+. +++....- + -.-+||++....|-- +-. | =+|+|..
T Consensus 7 r~iv~G~a~Ge~Lvs~~~lSF~GgvDp~tG~id~~H~L~G~siagkILv~P~gkGSt-~gS~vl~~l~~~g~aPaAiI~~ 85 (141)
T 2hi6_A 7 RAITRGRAEGEALVTKEYISFLGGIDKETGIVKEDCEIKGESVAGRILVFPGGKGST-VGSYVLLNLRKNGVAPKAIINK 85 (141)
T ss_dssp EESSCCEEEEEEEECCSCCCTTSCBCTTTCBBCSCSSSTTCBCTTSEEEESCCSCCS-SCTTHHHHHHHHTCSCSEEEES
T ss_pred EEEecceEEEEEEEeCCCceEeeeecCCCCEEcCCCCcCCCcccCeEEEecCCCCcc-HHHHHHHHHHHCCCCCeEEEec
Confidence 46899999999988663 22111111 1 124699999887775 332 2 3688888
Q ss_pred CCCCCcchhhhhcccCCceeeEecchHHHHHHHhcCCCeEEEEEcCCceEEeecC
Q 001333 699 DMPDVLSHVSIRARNNKVCFATCFDQNILRNLRLKEGKAVSIRLKSTNLIISDIS 753 (1097)
Q Consensus 699 ~~~~~LSHv~VRARn~gVp~at~~d~~~~~~l~~l~Gk~V~l~vs~~~~~l~~~~ 753 (1097)
+.=+.+.==++.|. ||.+.+.+++.++.|+ +|.+|++......+.+.+.+
T Consensus 86 ~~e~Il~~Gaiva~---IP~vd~~~~d~~~~i~--~G~~v~vd~~~G~v~v~~~~ 135 (141)
T 2hi6_A 86 KTETIIAVGAAMAE---IPLVEVRDEKFFEAVK--TGDRVVVNADEGYVELIELE 135 (141)
T ss_dssp SCCHHHHHHHHHHT---CCEEECCCTHHHHHCC--TTSEEEEETTTTEEEEEC--
T ss_pred CcchhhhhhhheeC---CceEeccChhHHHHhc--CCCEEEEeCCCCEEEEeeec
Confidence 86667777778887 9999999988788775 59999998877667776543
No 19
>1ow5_A Serine/threonine-protein kinase STE11; MAP kinase, MAPKKK, SAM domain, pointed domain, SCM domain, STE50 regulator, transferase; NMR {Saccharomyces cerevisiae} SCOP: a.60.1.2 PDB: 1x9x_A
Probab=25.46 E-value=13 Score=33.91 Aligned_cols=57 Identities=19% Similarity=0.316 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHcCCChhhHHHHHhhCCCCh-hhhhcCCCCcccCCCCCchhhhhhhHHHHHHHHHHHhh
Q 001333 348 DIIICEALLNYIRCGFKIDAYWQTLNCHGLSK-QKLASYDRPIVSEPRFRADAKESLTRDLTMYLKTLKAV 417 (1097)
Q Consensus 348 dv~icea~l~~l~~~~~~~~yw~~l~~~g~t~-e~l~s~dr~i~~~p~~~~~~~~~l~~d~~~yl~~lk~v 417 (1097)
|+..|..+|..|.+ ..|-...-+|||+- |.|...|..+.-|=- |.-..+=++|||++
T Consensus 14 ~~~~v~~wL~si~c----~qY~~~F~eN~I~g~d~L~eLd~e~LkElG---------I~kvGdRirIlk~v 71 (85)
T 1ow5_A 14 DLPFVQLFLEEIGC----TQYLDSFIQCNLVTEEEIKYLDKDILIALG---------VNKIGDRLKILRKS 71 (85)
T ss_dssp --CHHHHHHHHHSC----THHHHHHHHHTCCCHHHHHHCCHHHHHHHT---------CCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHcCC----hhHHHHHHHcCCCcHHHHHHcCHHHHHHhC---------CCcccHHHHHHHHH
Confidence 34488888888855 47999999999999 999988865532211 34456667888765
No 20
>2la2_A Cecropin, papiliocin; antimicrobial peptide, cecropin-like peptide, AN inflammatory activity, antimicrobial protein; NMR {Papilio xuthus}
Probab=25.09 E-value=19 Score=27.93 Aligned_cols=11 Identities=45% Similarity=0.866 Sum_probs=9.2
Q ss_pred CchhhHHHHHH
Q 001333 311 VGQRIRDEILV 321 (1097)
Q Consensus 311 ~gq~ird~il~ 321 (1097)
+||+|||.|..
T Consensus 11 vGq~iRd~ii~ 21 (38)
T 2la2_A 11 VGRNVRDGIIK 21 (38)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 69999999863
Done!