Query 001335
Match_columns 1097
No_of_seqs 428 out of 3409
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 22:51:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001335.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001335hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ixz_A Potassium-transporting 100.0 7E-104 2E-108 1016.1 70.3 837 53-1087 80-984 (1034)
2 3ar4_A Sarcoplasmic/endoplasmi 100.0 2E-102 8E-107 1001.0 69.7 858 52-1086 31-952 (995)
3 2zxe_A Na, K-ATPase alpha subu 100.0 2E-103 6E-108 1010.3 53.2 834 53-1087 75-978 (1028)
4 1mhs_A Proton pump, plasma mem 100.0 6.1E-96 2E-100 915.0 42.2 735 53-1086 95-845 (920)
5 3b8c_A ATPase 2, plasma membra 100.0 7.4E-94 2.5E-98 897.9 -20.1 677 52-1018 39-729 (885)
6 3rfu_A Copper efflux ATPase; a 100.0 1.4E-70 4.9E-75 675.1 36.4 491 115-931 193-696 (736)
7 3j09_A COPA, copper-exporting 100.0 8.8E-69 3E-73 665.0 42.8 486 115-931 179-676 (723)
8 3j08_A COPA, copper-exporting 100.0 4.6E-69 1.6E-73 658.4 39.5 485 116-931 102-598 (645)
9 2yj3_A Copper-transporting ATP 99.8 2.5E-25 8.5E-30 243.7 0.0 137 687-915 124-262 (263)
10 3a1c_A Probable copper-exporti 99.9 1.1E-20 3.9E-25 209.7 22.9 272 403-914 14-287 (287)
11 3skx_A Copper-exporting P-type 99.8 1.6E-19 5.4E-24 199.5 22.7 274 409-922 1-276 (280)
12 2hc8_A PACS, cation-transporti 99.8 6.4E-21 2.2E-25 177.3 7.7 99 134-285 5-103 (113)
13 2kij_A Copper-transporting ATP 99.8 4.4E-19 1.5E-23 168.0 5.9 98 135-285 12-115 (124)
14 3gwi_A Magnesium-transporting 99.7 1.5E-18 5.1E-23 174.7 1.9 140 506-699 17-165 (170)
15 4fe3_A Cytosolic 5'-nucleotida 99.4 6.3E-14 2.1E-18 156.1 6.3 140 697-899 139-287 (297)
16 3mn1_A Probable YRBI family ph 99.0 3.7E-10 1.3E-14 116.5 9.8 137 689-924 42-187 (189)
17 3dnp_A Stress response protein 99.0 9.2E-10 3.1E-14 121.8 9.3 81 833-914 195-286 (290)
18 4dw8_A Haloacid dehalogenase-l 98.9 6.8E-10 2.3E-14 122.1 7.2 78 831-909 188-276 (279)
19 3dao_A Putative phosphatse; st 98.9 2.4E-09 8.3E-14 118.0 9.3 190 699-896 39-271 (283)
20 3mpo_A Predicted hydrolase of 98.9 1.5E-09 5.2E-14 119.2 7.0 204 699-908 22-275 (279)
21 1l6r_A Hypothetical protein TA 98.8 4.4E-09 1.5E-13 111.7 9.0 180 697-895 20-212 (227)
22 3pgv_A Haloacid dehalogenase-l 98.8 2.2E-09 7.5E-14 118.5 5.9 184 698-890 37-263 (285)
23 1k1e_A Deoxy-D-mannose-octulos 98.8 1.3E-08 4.5E-13 103.9 10.8 129 700-921 36-173 (180)
24 3n28_A Phosphoserine phosphata 98.8 9.9E-09 3.4E-13 116.1 8.6 150 699-924 178-333 (335)
25 1u02_A Trehalose-6-phosphate p 98.7 1.3E-08 4.5E-13 109.0 8.9 178 699-894 23-211 (239)
26 3ij5_A 3-deoxy-D-manno-octulos 98.7 2.6E-08 9E-13 104.1 10.1 108 690-895 73-183 (211)
27 3ewi_A N-acylneuraminate cytid 98.7 2.8E-08 9.5E-13 99.7 9.7 107 687-894 30-141 (168)
28 3n07_A 3-deoxy-D-manno-octulos 98.7 1.2E-08 4.1E-13 105.4 7.2 97 707-895 60-159 (195)
29 3mmz_A Putative HAD family hyd 98.7 4.7E-08 1.6E-12 99.3 10.8 116 690-904 36-160 (176)
30 3l7y_A Putative uncharacterize 98.7 1E-08 3.5E-13 114.3 6.1 65 831-896 219-288 (304)
31 2pq0_A Hypothetical conserved 98.7 3.5E-08 1.2E-12 107.0 9.1 58 838-896 183-243 (258)
32 2zos_A MPGP, mannosyl-3-phosph 98.6 2.3E-08 7.9E-13 107.9 6.8 64 832-895 172-240 (249)
33 3n1u_A Hydrolase, HAD superfam 98.6 4.2E-08 1.4E-12 101.1 7.9 116 708-915 55-178 (191)
34 1rkq_A Hypothetical protein YI 98.6 3.9E-08 1.3E-12 108.2 7.8 192 699-895 22-257 (282)
35 3fzq_A Putative hydrolase; YP_ 98.6 5.6E-08 1.9E-12 106.2 8.6 63 834-897 194-261 (274)
36 2b30_A Pvivax hypothetical pro 98.6 3.9E-08 1.3E-12 109.2 7.0 64 831-895 215-284 (301)
37 3r4c_A Hydrolase, haloacid deh 98.6 1.4E-08 4.9E-13 110.7 2.9 64 832-896 186-254 (268)
38 3e8m_A Acylneuraminate cytidyl 98.5 1.4E-07 4.8E-12 94.4 8.8 110 707-909 39-157 (164)
39 4ap9_A Phosphoserine phosphata 98.5 2E-07 6.8E-12 96.1 8.1 117 699-901 79-195 (201)
40 1rlm_A Phosphatase; HAD family 98.5 1.4E-07 4.8E-12 103.1 6.6 63 833-896 184-251 (271)
41 1nf2_A Phosphatase; structural 98.4 1.5E-07 5.1E-12 102.7 6.6 63 832-895 182-249 (268)
42 2r8e_A 3-deoxy-D-manno-octulos 98.4 4.5E-07 1.5E-11 93.1 9.7 110 707-908 61-180 (188)
43 1nrw_A Hypothetical protein, h 98.4 1.2E-06 4.1E-11 96.5 13.0 65 831-896 207-276 (288)
44 1l7m_A Phosphoserine phosphata 98.4 4.8E-07 1.6E-11 94.0 8.2 121 699-894 76-200 (211)
45 1s2o_A SPP, sucrose-phosphatas 98.4 3.1E-07 1.1E-11 98.6 6.9 187 702-896 22-229 (244)
46 3m1y_A Phosphoserine phosphata 98.4 6.7E-07 2.3E-11 93.6 8.8 125 698-897 74-202 (217)
47 1wr8_A Phosphoglycolate phosph 98.3 2.2E-06 7.4E-11 91.1 11.0 181 698-896 19-213 (231)
48 3f9r_A Phosphomannomutase; try 98.3 2.7E-07 9.2E-12 99.1 3.7 50 831-881 178-234 (246)
49 1xvi_A MPGP, YEDP, putative ma 98.3 2.1E-06 7E-11 93.9 10.7 53 699-755 26-78 (275)
50 3p96_A Phosphoserine phosphata 98.3 1.9E-06 6.4E-11 100.3 10.9 120 699-897 256-383 (415)
51 1svj_A Potassium-transporting 98.3 2.7E-06 9.1E-11 83.5 9.8 107 532-702 49-156 (156)
52 2rbk_A Putative uncharacterize 98.2 7.3E-07 2.5E-11 96.7 5.7 59 838-897 187-248 (261)
53 3kd3_A Phosphoserine phosphohy 98.2 1.5E-06 5.3E-11 90.5 7.9 134 699-902 82-218 (219)
54 3m9l_A Hydrolase, haloacid deh 98.2 2.5E-06 8.7E-11 88.4 9.2 130 698-908 69-201 (205)
55 1y8a_A Hypothetical protein AF 98.2 2.2E-06 7.5E-11 96.5 9.0 76 836-915 205-291 (332)
56 2fue_A PMM 1, PMMH-22, phospho 98.2 1.4E-06 4.9E-11 94.5 6.5 61 832-894 189-257 (262)
57 4eze_A Haloacid dehalogenase-l 98.2 3.1E-06 1E-10 94.3 9.2 121 699-894 179-303 (317)
58 4ex6_A ALNB; modified rossman 98.2 2.5E-06 8.5E-11 90.5 7.9 125 698-901 103-231 (237)
59 3zx4_A MPGP, mannosyl-3-phosph 98.2 8.5E-06 2.9E-10 88.1 12.0 54 837-894 175-233 (259)
60 2amy_A PMM 2, phosphomannomuta 98.1 4.5E-07 1.6E-11 97.4 1.8 58 832-891 180-245 (246)
61 1te2_A Putative phosphatase; s 98.1 5.4E-06 1.8E-10 86.8 9.0 122 699-900 94-219 (226)
62 2p9j_A Hypothetical protein AQ 98.1 7E-06 2.4E-10 81.7 9.1 105 699-896 36-144 (162)
63 3mc1_A Predicted phosphatase, 98.1 6.1E-06 2.1E-10 86.7 8.8 121 698-902 85-214 (226)
64 1rku_A Homoserine kinase; phos 98.0 2.9E-05 9.7E-10 80.4 12.6 123 699-901 69-195 (206)
65 1nnl_A L-3-phosphoserine phosp 98.0 7E-06 2.4E-10 86.4 7.8 128 698-899 85-220 (225)
66 3fvv_A Uncharacterized protein 98.0 1.5E-05 5.2E-10 84.2 9.6 41 699-739 92-132 (232)
67 3sd7_A Putative phosphatase; s 97.9 1.5E-05 5E-10 84.8 7.8 121 698-902 109-239 (240)
68 4gxt_A A conserved functionall 97.9 1.1E-05 3.6E-10 92.0 6.9 41 698-738 220-260 (385)
69 3s6j_A Hydrolase, haloacid deh 97.9 1.1E-05 3.6E-10 85.1 6.4 43 698-740 90-132 (233)
70 3d6j_A Putative haloacid dehal 97.9 1.7E-05 5.8E-10 82.9 7.4 41 699-739 89-129 (225)
71 2go7_A Hydrolase, haloacid deh 97.8 1.6E-05 5.5E-10 81.7 6.5 118 699-901 85-203 (207)
72 3e58_A Putative beta-phosphogl 97.8 2.2E-05 7.4E-10 81.2 7.3 122 699-899 89-211 (214)
73 2pib_A Phosphorylated carbohyd 97.8 2.6E-05 8.9E-10 80.8 7.9 42 699-740 84-125 (216)
74 3nas_A Beta-PGM, beta-phosphog 97.8 2.9E-05 9.8E-10 82.0 7.8 118 699-899 92-209 (233)
75 3um9_A Haloacid dehalogenase, 97.8 3E-05 1E-09 81.4 7.5 119 698-901 95-222 (230)
76 2nyv_A Pgpase, PGP, phosphogly 97.7 5.1E-05 1.7E-09 79.7 8.1 125 698-902 82-208 (222)
77 2hsz_A Novel predicted phospha 97.7 2.9E-05 9.7E-10 83.0 6.1 42 698-739 113-154 (243)
78 2wf7_A Beta-PGM, beta-phosphog 97.7 2E-05 6.9E-10 82.2 4.8 47 850-898 161-207 (221)
79 3kzx_A HAD-superfamily hydrola 97.7 8.7E-05 3E-09 78.1 9.5 115 698-901 102-224 (231)
80 3ddh_A Putative haloacid dehal 97.7 0.00012 4E-09 76.8 10.4 116 699-901 105-232 (234)
81 3gyg_A NTD biosynthesis operon 97.7 0.00027 9.2E-09 77.5 13.5 67 830-897 201-272 (289)
82 3umb_A Dehalogenase-like hydro 97.7 4.3E-05 1.5E-09 80.5 6.4 124 698-902 98-226 (233)
83 2om6_A Probable phosphoserine 97.6 7.2E-05 2.4E-09 78.7 7.9 41 699-739 99-142 (235)
84 3l8h_A Putative haloacid dehal 97.6 8.4E-05 2.9E-09 75.1 7.9 54 850-903 117-176 (179)
85 3nuq_A Protein SSM1, putative 97.6 4.1E-05 1.4E-09 83.7 5.6 125 699-901 142-277 (282)
86 3ed5_A YFNB; APC60080, bacillu 97.6 0.00025 8.5E-09 74.7 11.3 120 698-902 102-230 (238)
87 1swv_A Phosphonoacetaldehyde h 97.6 4.2E-05 1.4E-09 82.7 5.3 40 699-738 103-142 (267)
88 2hoq_A Putative HAD-hydrolase 97.6 0.00026 8.9E-09 75.1 11.5 41 699-739 94-134 (241)
89 3iru_A Phoshonoacetaldehyde hy 97.6 7.9E-05 2.7E-09 80.7 7.5 41 699-739 111-151 (277)
90 3qnm_A Haloacid dehalogenase-l 97.6 0.00021 7E-09 75.4 10.0 125 699-908 107-236 (240)
91 2fea_A 2-hydroxy-3-keto-5-meth 97.6 0.00013 4.3E-09 77.5 8.3 137 698-901 76-214 (236)
92 2hcf_A Hydrolase, haloacid deh 97.5 8.8E-05 3E-09 78.1 7.0 41 699-739 93-134 (234)
93 4eek_A Beta-phosphoglucomutase 97.5 7.8E-05 2.7E-09 80.2 6.7 43 697-739 108-150 (259)
94 3u26_A PF00702 domain protein; 97.5 0.00022 7.6E-09 74.9 10.0 121 699-902 100-226 (234)
95 2no4_A (S)-2-haloacid dehaloge 97.4 0.00035 1.2E-08 74.0 10.1 42 699-740 105-146 (240)
96 2hdo_A Phosphoglycolate phosph 97.4 4.8E-05 1.6E-09 78.8 3.2 41 698-739 82-122 (209)
97 3dv9_A Beta-phosphoglucomutase 97.4 0.00021 7.1E-09 75.8 7.9 41 698-739 107-147 (247)
98 1zrn_A L-2-haloacid dehalogena 97.4 0.0001 3.6E-09 77.5 5.4 41 699-739 95-135 (232)
99 2hi0_A Putative phosphoglycola 97.4 0.00029 1E-08 74.8 8.7 41 699-739 110-150 (240)
100 2ah5_A COG0546: predicted phos 97.4 0.00025 8.5E-09 73.6 7.3 41 699-740 84-124 (210)
101 3qxg_A Inorganic pyrophosphata 97.3 0.00018 6.2E-09 76.4 6.0 41 698-739 108-148 (243)
102 3l5k_A Protein GS1, haloacid d 97.3 0.0001 3.5E-09 78.7 4.1 50 852-901 191-242 (250)
103 2w43_A Hypothetical 2-haloalka 97.2 0.00043 1.5E-08 71.0 7.4 40 698-739 73-112 (201)
104 2wm8_A MDP-1, magnesium-depend 97.2 0.0005 1.7E-08 69.9 7.6 42 698-739 67-109 (187)
105 2fdr_A Conserved hypothetical 97.2 0.00036 1.2E-08 73.0 6.5 52 850-901 159-218 (229)
106 3umg_A Haloacid dehalogenase; 97.2 0.00039 1.3E-08 73.9 6.4 122 699-905 116-249 (254)
107 2gmw_A D,D-heptose 1,7-bisphos 97.1 0.00066 2.3E-08 70.6 7.0 51 851-901 148-202 (211)
108 1qq5_A Protein (L-2-haloacid d 97.1 0.0011 3.8E-08 70.8 9.0 39 699-739 93-131 (253)
109 3pdw_A Uncharacterized hydrola 97.1 0.0033 1.1E-07 67.7 12.6 43 698-740 21-66 (266)
110 2pke_A Haloacid delahogenase-l 97.0 0.0032 1.1E-07 67.0 12.2 40 699-739 112-151 (251)
111 3umc_A Haloacid dehalogenase; 97.0 0.00059 2E-08 72.7 6.3 119 699-902 120-250 (254)
112 2fi1_A Hydrolase, haloacid deh 97.0 0.00074 2.5E-08 68.4 6.4 39 700-739 83-121 (190)
113 2qlt_A (DL)-glycerol-3-phospha 97.0 0.00083 2.8E-08 72.9 6.9 41 699-739 114-155 (275)
114 2x4d_A HLHPP, phospholysine ph 97.0 0.018 6.2E-07 61.5 17.5 40 700-739 33-75 (271)
115 3smv_A S-(-)-azetidine-2-carbo 97.0 0.00081 2.8E-08 70.6 6.5 52 850-901 171-233 (240)
116 3k1z_A Haloacid dehalogenase-l 96.9 0.00077 2.6E-08 72.6 6.0 124 699-902 106-235 (263)
117 3ib6_A Uncharacterized protein 96.8 0.0053 1.8E-07 62.4 10.7 42 699-740 34-78 (189)
118 3qgm_A P-nitrophenyl phosphata 96.7 0.01 3.4E-07 63.9 12.9 45 697-741 22-69 (268)
119 3vay_A HAD-superfamily hydrola 96.7 0.0028 9.7E-08 66.1 7.8 53 850-902 171-226 (230)
120 2o2x_A Hypothetical protein; s 96.6 0.0017 5.9E-08 67.7 5.9 41 698-738 55-110 (218)
121 1vjr_A 4-nitrophenylphosphatas 96.6 0.004 1.4E-07 67.1 8.9 42 698-739 32-76 (271)
122 3epr_A Hydrolase, haloacid deh 96.3 0.01 3.4E-07 63.8 9.8 42 699-741 22-66 (264)
123 2gfh_A Haloacid dehalogenase-l 96.3 0.0092 3.1E-07 64.0 8.9 41 699-740 121-161 (260)
124 3cnh_A Hydrolase family protei 96.2 0.002 6.9E-08 65.8 3.0 40 699-739 86-125 (200)
125 3pct_A Class C acid phosphatas 95.9 0.013 4.6E-07 62.0 8.0 43 697-739 99-145 (260)
126 2i6x_A Hydrolase, haloacid deh 95.9 0.002 6.8E-08 66.4 1.6 36 699-735 89-124 (211)
127 3kbb_A Phosphorylated carbohyd 95.9 0.017 5.7E-07 59.6 8.7 42 699-740 84-125 (216)
128 2c4n_A Protein NAGD; nucleotid 95.9 0.03 1E-06 58.7 10.9 41 699-739 19-62 (250)
129 3nvb_A Uncharacterized protein 95.8 0.0061 2.1E-07 68.5 5.0 35 701-735 258-292 (387)
130 2pr7_A Haloacid dehalogenase/e 95.8 0.0015 5E-08 62.2 -0.3 42 698-739 17-58 (137)
131 2oda_A Hypothetical protein ps 95.6 0.029 9.9E-07 57.3 8.6 35 699-733 36-70 (196)
132 1qyi_A ZR25, hypothetical prot 95.4 0.019 6.5E-07 65.0 7.2 42 699-740 215-256 (384)
133 3ocu_A Lipoprotein E; hydrolas 95.4 0.02 6.8E-07 60.8 6.7 43 697-739 99-145 (262)
134 2kmv_A Copper-transporting ATP 95.4 0.12 4.2E-06 51.9 12.2 51 607-699 135-185 (185)
135 2zg6_A Putative uncharacterize 95.2 0.049 1.7E-06 56.4 9.0 40 699-739 95-134 (220)
136 2b0c_A Putative phosphatase; a 95.2 0.0017 5.7E-08 66.6 -2.4 30 699-728 91-120 (206)
137 4gib_A Beta-phosphoglucomutase 94.9 0.032 1.1E-06 59.3 6.8 118 697-898 114-232 (250)
138 2i33_A Acid phosphatase; HAD s 94.7 0.037 1.3E-06 59.1 6.4 43 697-739 99-144 (258)
139 2ho4_A Haloacid dehalogenase-l 94.6 0.54 1.9E-05 49.5 15.6 63 839-901 181-253 (259)
140 2oyc_A PLP phosphatase, pyrido 94.5 0.17 5.8E-06 55.4 11.6 43 697-739 35-80 (306)
141 4dcc_A Putative haloacid dehal 94.4 0.017 5.7E-07 60.3 2.9 35 699-734 112-146 (229)
142 4as2_A Phosphorylcholine phosp 94.3 0.03 1E-06 61.9 4.6 42 695-736 139-180 (327)
143 2fpr_A Histidine biosynthesis 93.9 0.018 6.2E-07 57.7 1.7 41 699-739 42-97 (176)
144 2p11_A Hypothetical protein; p 93.9 0.11 3.8E-06 54.1 8.0 40 698-738 95-134 (231)
145 1ltq_A Polynucleotide kinase; 93.4 0.075 2.6E-06 58.1 6.0 32 697-728 186-217 (301)
146 1yns_A E-1 enzyme; hydrolase f 91.3 0.31 1.1E-05 51.9 7.3 39 698-736 129-167 (261)
147 4g9b_A Beta-PGM, beta-phosphog 90.6 0.34 1.2E-05 50.9 6.6 41 698-740 94-134 (243)
148 2obb_A Hypothetical protein; s 89.3 0.36 1.2E-05 46.0 5.0 40 700-739 25-67 (142)
149 2arf_A Wilson disease ATPase; 88.7 2.9 9.9E-05 40.9 11.3 36 609-648 118-153 (165)
150 2b82_A APHA, class B acid phos 86.2 0.33 1.1E-05 49.9 2.8 29 700-728 89-117 (211)
151 1yv9_A Hydrolase, haloacid deh 86.1 3.9 0.00013 43.0 11.5 42 698-739 20-65 (264)
152 4fe3_A Cytosolic 5'-nucleotida 82.2 0.38 1.3E-05 52.3 1.3 36 401-437 15-59 (297)
153 3i28_A Epoxide hydrolase 2; ar 78.2 0.88 3E-05 53.6 2.8 26 699-724 100-125 (555)
154 3zvl_A Bifunctional polynucleo 74.3 2 7E-05 49.0 4.2 26 700-725 88-113 (416)
155 2hhl_A CTD small phosphatase-l 70.9 1.4 4.7E-05 44.6 1.5 42 697-739 66-107 (195)
156 1xpj_A Hypothetical protein; s 69.3 4.1 0.00014 37.7 4.4 30 699-728 24-53 (126)
157 2g80_A Protein UTR4; YEL038W, 67.0 3.8 0.00013 43.2 4.0 35 698-736 124-158 (253)
158 2ght_A Carboxy-terminal domain 65.9 1.9 6.4E-05 43.0 1.3 41 698-739 54-94 (181)
159 3bwv_A Putative 5'(3')-deoxyri 65.0 11 0.00038 36.8 6.9 25 699-724 69-93 (180)
160 2i7d_A 5'(3')-deoxyribonucleot 59.5 2.8 9.5E-05 41.9 1.2 41 698-738 72-113 (193)
161 1zjj_A Hypothetical protein PH 53.3 6.8 0.00023 41.2 3.1 42 698-739 16-60 (263)
162 1q92_A 5(3)-deoxyribonucleotid 49.8 5.7 0.00019 39.7 1.6 42 698-739 74-116 (197)
163 1zjj_A Hypothetical protein PH 46.7 12 0.00042 39.1 3.8 50 850-899 201-257 (263)
164 1ccw_A Protein (glutamate muta 44.9 52 0.0018 30.6 7.4 82 634-739 25-114 (137)
165 2jmz_A Hypothetical protein MJ 44.0 19 0.00065 35.7 4.4 37 140-176 102-138 (186)
166 2hx1_A Predicted sugar phospha 43.1 19 0.00066 38.0 4.7 43 697-739 28-73 (284)
167 3n28_A Phosphoserine phosphata 42.4 15 0.0005 40.2 3.7 48 693-740 37-95 (335)
168 3kc2_A Uncharacterized protein 38.9 28 0.00095 38.4 5.2 48 692-739 22-73 (352)
169 2lcj_A PAB POLC intein; hydrol 36.7 36 0.0012 33.6 5.1 34 141-174 93-126 (185)
170 1d1n_A Initiation factor 2; be 31.8 36 0.0012 29.8 3.5 20 155-174 78-97 (99)
171 2l82_A Designed protein OR32; 28.7 2.9E+02 0.0099 24.0 10.1 17 630-646 16-32 (162)
172 2yxb_A Coenzyme B12-dependent 28.5 63 0.0022 31.0 5.2 81 635-739 41-123 (161)
173 2i2x_B MTAC, methyltransferase 27.0 92 0.0032 32.5 6.6 79 635-738 146-224 (258)
174 2crv_A IF-2MT, translation ini 24.7 59 0.002 29.5 3.8 22 155-176 85-107 (120)
175 3ezx_A MMCP 1, monomethylamine 24.0 54 0.0019 33.2 3.9 78 635-738 115-197 (215)
176 1nz9_A Transcription antitermi 23.8 1.2E+02 0.0043 23.2 5.2 42 158-199 4-45 (58)
177 3ff4_A Uncharacterized protein 20.1 54 0.0018 29.9 2.7 39 700-738 67-106 (122)
No 1
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=100.00 E-value=6.7e-104 Score=1016.13 Aligned_cols=837 Identities=17% Similarity=0.172 Sum_probs=636.8
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc--Cc-------ccCcccchhhHHHHHHHHHHH
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP--MS-------PVNPVTNVVPLSLVLLVSLIK 123 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~--~~-------~~~~~~~~~~l~~vl~is~~~ 123 (1097)
.|+++||+|.++.+|.+.+. +.|++||.++++++++++++++++. +. ..+.+...++++++++++++.
T Consensus 80 ~rl~~~G~N~l~~~~~~~~~---~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~ 156 (1034)
T 3ixz_A 80 ELLLRDGPNALRPPRGTPEY---VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCF 156 (1034)
T ss_pred HHHHhhCCCCCCCCCCCCHH---HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHH
Confidence 47889999999988765543 8999999999999999999888753 11 112344556677888899999
Q ss_pred HHHHHHHHhhchhhhc---CceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcc
Q 001335 124 EAWEDWKRFQNDMTIN---STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGET 200 (1097)
Q Consensus 124 ~~~ed~~r~k~~~~~n---~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs 200 (1097)
++++++|..++.++++ +++++|+|||++++|+|++|+|||||.|++||.||||++|+++++ +.||||+|||||
T Consensus 157 ~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTGES 232 (1034)
T 3ixz_A 157 GYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTGES 232 (1034)
T ss_pred HHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCCCC
Confidence 9999999998866554 688999999999999999999999999999999999999999886 789999999999
Q ss_pred cceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCc
Q 001335 201 NLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHE 280 (1097)
Q Consensus 201 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~ 280 (1097)
.|+.|.+.+.. ..|+...|++++||.+.+ |.+.|+|++||.+
T Consensus 233 ~pv~K~~~~~~-------------------------------------~~~~~~~n~~f~GT~v~~-G~~~~vVv~tG~~ 274 (1034)
T 3ixz_A 233 EPQTRSPECTH-------------------------------------ESPLETRNIAFFSTMCLE-GTAQGLVVNTGDR 274 (1034)
T ss_pred CCeeccCCCcc-------------------------------------ccccccccceecceeEEe-ecceEEEEeehhh
Confidence 99999875421 112333455555555554 3499999999999
Q ss_pred ccee---eccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHH
Q 001335 281 TKVM---MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVF 357 (1097)
Q Consensus 281 Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 357 (1097)
|.++ +.....+.+++|+++.++++..++..+.++++++.++++.+... .+
T Consensus 275 T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------------~~ 327 (1034)
T 3ixz_A 275 TIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIGY---------------------------TF 327 (1034)
T ss_pred hHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---------------------------hH
Confidence 9654 44556778899999999999999988888887777665433211 25
Q ss_pred HHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecce
Q 001335 358 VLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM 437 (1097)
Q Consensus 358 ~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m 437 (1097)
...+..++.+++.+||++||++++++.+++ +.++ +++++++|+++++|+||++++||||||||||+|+|
T Consensus 328 ~~~~~~~i~l~v~~iPe~Lp~~vti~la~~-~~rm----------ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m 396 (1034)
T 3ixz_A 328 LRAMVFFMAIVVAYVPEGLLATVTVCLSLT-AKRL----------ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRM 396 (1034)
T ss_pred HHHHHHHHHHHHheeccccHHHHHHHHHHH-HHHH----------hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeE
Confidence 667888999999999999999999999999 8877 88999999999999999999999999999999999
Q ss_pred EEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccce
Q 001335 438 EFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTV 517 (1097)
Q Consensus 438 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~ 517 (1097)
+|.++++++..|..+..+... +. ..+...+....+++++++||++
T Consensus 397 ~v~~~~~~~~~~~~~~~~~~~-----------------------~~------------~~~~~~~~~~~l~~~~~lc~~a 441 (1034)
T 3ixz_A 397 TVSHLWFDNHIHSADTTEDQS-----------------------GQ------------TFDQSSETWRALCRVLTLCNRA 441 (1034)
T ss_pred EEEEEEECCccccccCccccc-----------------------cc------------ccCcCCHHHHHHHHHHHHhccc
Confidence 999999988766532211000 00 0011233566789999999998
Q ss_pred EeccCCCCC--ceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEE
Q 001335 518 LPEGDESPE--RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVV 595 (1097)
Q Consensus 518 ~~~~~~~~~--~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (1097)
....+++.. .-.+..++|+|.|+++++...|..... ....|+.+..+||+|+||||+++
T Consensus 442 ~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~-------------------~~~~~~~~~~~pF~s~rk~m~~v 502 (1034)
T 3ixz_A 442 AFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMG-------------------YRERFPKVCEIPFNSTNKFQLSI 502 (1034)
T ss_pred eeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHH-------------------HHHhCcceEEeeecCCCceEEEE
Confidence 765432211 122346899999999999887643211 14568889999999999999988
Q ss_pred EEec---CCcEEEEEecchhHHHHHhhc---------CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001335 596 CRYA---DGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 663 (1097)
Q Consensus 596 v~~~---~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~ 663 (1097)
++.. ++++.+|+|||||.|+++|+. .+++.++.+.+.+++|+.+|+|||++|||+++++++.++....
T Consensus 503 ~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~ 582 (1034)
T 3ixz_A 503 HTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFD 582 (1034)
T ss_pred EEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccccc
Confidence 8754 367999999999999999974 2334677788999999999999999999999987665432211
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCC
Q 001335 664 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 743 (1097)
Q Consensus 664 ~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 743 (1097)
+ +..+.+|+||+|+|+++++||+|++++++|++|+++||++||+|||++.||.++|+++|+..++.
T Consensus 583 ---------~-----~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~ 648 (1034)
T 3ixz_A 583 ---------V-----EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGS 648 (1034)
T ss_pred ---------h-----hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCc
Confidence 0 11245689999999999999999999999999999999999999999999999999999976432
Q ss_pred eEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcc-cccCCCeEEEEEcCccchhhcChhHHHHHHhh
Q 001335 744 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYI-HSISGEKLALIIDGKCLMYALDPSLRVILLNL 822 (1097)
Q Consensus 744 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l 822 (1097)
.. +. +......... ..........+++|..+....++++.+ .
T Consensus 649 ~~---------i~------------------------~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~----~ 691 (1034)
T 3ixz_A 649 ET---------VE------------------------DIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVE----A 691 (1034)
T ss_pred hH---------HH------------------------HHHHhhCccchhccccccceeEEecHhhhhCCHHHHHH----H
Confidence 10 00 0000000000 011223345678888877654444433 3
Q ss_pred hccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHH-
Q 001335 823 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL- 901 (1097)
Q Consensus 823 ~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~l- 901 (1097)
...++..+|+|++|+||.++++.+|+ .+++|+|+|||.||++||++||+||||+++....||++||+++.++++...+
T Consensus 692 ~~~~~~~v~ar~~P~~K~~iv~~lq~-~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ 770 (1034)
T 3ixz_A 692 LRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVT 770 (1034)
T ss_pred HHhCCceEEEecCHHHHHHHHHHHHH-cCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHH
Confidence 34455679999999999999999998 6999999999999999999999999996455555999999999999985554
Q ss_pred HHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcC
Q 001335 902 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKY 981 (1097)
Q Consensus 902 ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~ 981 (1097)
.+.|||++|+|+++++.|.+++|+..+++.+++.++. ...++.++|++|+|++++.+|+++++.. +++..+|++
T Consensus 771 ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal~~e---~~~~~~m~~ 844 (1034)
T 3ixz_A 771 GVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSLAYE---KAESDIMHL 844 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHhhcC---CCChhhhhC
Confidence 4789999999999999999999999999999888774 2345889999999999999999999862 344556655
Q ss_pred chhhhhcc-cccccCHHHHHHH-HHHHHHHHHHHHHhhh-hcCCCccCC---------------------CCc-------
Q 001335 982 PQLYQEGI-KNVFFTWRVVAIW-AFFSVYQSLVLYNCVT-TSSATGQNS---------------------SGK------- 1030 (1097)
Q Consensus 982 P~ly~~~~-~~~~~~~~~~~~~-~~~~~~~~~~if~~~~-~~~~~~~~~---------------------~g~------- 1030 (1097)
|+ +.+ +..+++.+.++.. +..|++++++.|+.++ .+...++.. .|.
T Consensus 845 ~P---r~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 921 (1034)
T 3ixz_A 845 RP---RNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQR 921 (1034)
T ss_pred CC---CCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccccccccccccchhhh
Confidence 55 354 4678888776653 4458888776665554 221111100 000
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHh-ccc---c--hHHHHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1031 IFGIWDVSTMAFTCVVVTVNLRLLMM-CNT---I--TRFHYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1031 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~---~--~~~~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
........|++|+++++.+.+..+.. +.. | .++.+.++|+++++.+++++++.++|+
T Consensus 922 ~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~ 984 (1034)
T 3ixz_A 922 LYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPG 984 (1034)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhh
Confidence 00112357888888887666655432 111 2 235788889999999998888888874
No 2
>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...
Probab=100.00 E-value=2.4e-102 Score=1001.01 Aligned_cols=858 Identities=20% Similarity=0.222 Sum_probs=619.1
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhcccc-Cccc------CcccchhhHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTP-MSPV------NPVTNVVPLSLVLLVSLIKE 124 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~-~~~~------~~~~~~~~l~~vl~is~~~~ 124 (1097)
+.|+++||+|+++.+|+..+. +.|++||++++++++++++++++++ +.+. .|+..++ ++++++++++..
T Consensus 31 ~~r~~~~G~N~l~~~~~~~~~---~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~i~ 106 (995)
T 3ar4_A 31 KRHLEKYGHNELPAEEGKSLW---ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFV-ILLILIANAIVG 106 (995)
T ss_dssp HHHHHHHCCSSCCCCCCCCHH---HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHH-HHHHHHHHHHHH
T ss_pred HHHHHhcCCCccCCCCCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHH-hhHHHHHHHHHH
Confidence 347889999999998765442 8999999999999999999999876 3221 2333333 334555666667
Q ss_pred HHHHHHHhhch---hhhcCceEEEeeCCe--EEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCc
Q 001335 125 AWEDWKRFQND---MTINSTPVEVLQGQR--WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGE 199 (1097)
Q Consensus 125 ~~ed~~r~k~~---~~~n~~~~~V~r~g~--~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGE 199 (1097)
.++++|..++. +++.+.+++|+|||+ .++|+|++|+|||||.|++||.||||++|+++++ +.|+||||+||||
T Consensus 107 ~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s--~~l~VdeS~LTGE 184 (995)
T 3ar4_A 107 VWQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKS--TTLRVDQSILTGE 184 (995)
T ss_dssp HHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECS--SCEEEECHHHHCC
T ss_pred HHHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEee--ceEEEEcccccCC
Confidence 77777665553 445678999999887 6999999999999999999999999999987653 3499999999999
Q ss_pred ccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecC
Q 001335 200 TNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGH 279 (1097)
Q Consensus 200 s~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~ 279 (1097)
|+|+.|.+.+.. +| ...+.+.+|++++||.+.+ |+++|+|++||+
T Consensus 185 S~pv~K~~~~~~-------------------~~---------------~~~~~~~~~~v~~GT~v~~-G~~~~~V~~tG~ 229 (995)
T 3ar4_A 185 SVSVIKHTEPVP-------------------DP---------------RAVNQDKKNMLFSGTNIAA-GKALGIVATTGV 229 (995)
T ss_dssp CSCEEECCSCCC-------------------CT---------------TCCGGGCTTEECTTCEEEE-CEEEEEEEECGG
T ss_pred CcceeccccccC-------------------Cc---------------ccCcccccceEecCCEEEc-ceEEEEEEEcCc
Confidence 999999876421 01 1124567899999999998 789999999999
Q ss_pred ccceee---ccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHH
Q 001335 280 ETKVMM---NSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLV 356 (1097)
Q Consensus 280 ~Tk~~~---~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 356 (1097)
+|++++ ....++.+++|+|+++|++..++..+++++|++.++++..+.. . ... .......
T Consensus 230 ~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~-----------~~~~~~~ 292 (995)
T 3ar4_A 230 STEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN-D-----PVH-----------GGSWIRG 292 (995)
T ss_dssp GSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGG-S-----CSS-----------SSCHHHH
T ss_pred chHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c-----ccc-----------cchHHHH
Confidence 997754 4456778899999999999999988888887776554332110 0 000 0011223
Q ss_pred HHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecc
Q 001335 357 FVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNL 436 (1097)
Q Consensus 357 ~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~ 436 (1097)
+...|..++.+++.+||++||++++++.+++ +.++ +++++++|+++++|+||++|+||||||||||+|+
T Consensus 293 ~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~-~~~m----------a~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~ 361 (995)
T 3ar4_A 293 AIYYFKIAVALAVAAIPEGLPAVITTCLALG-TRRM----------AKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 361 (995)
T ss_dssp HHHHHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCC
T ss_pred HHHHHHHHHHHHHHhcCcchHHHHHHHHHHH-HHHh----------ccCCcEeccchhhhhhcCceEEEecCCCCcccCc
Confidence 3456778899999999999999999999998 7766 6789999999999999999999999999999999
Q ss_pred eEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccc
Q 001335 437 MEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHT 516 (1097)
Q Consensus 437 m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~ 516 (1097)
|+|+++++.+..++.... .........+. . +.+ .....+........+...+++.++++||+
T Consensus 362 m~v~~~~~~~~~~~~~~~-~~~~~~~~~~~-~-----------p~~-----~~~~~~~~~~~~~~~~~~~l~~~~alc~~ 423 (995)
T 3ar4_A 362 MSVCKMFIIDKVDGDFCS-LNEFSITGSTY-A-----------PEG-----EVLKNDKPIRSGQFDGLVELATICALCND 423 (995)
T ss_dssp CEEEEEEEEEEEETTEEE-EEEEEECCSSS-S-----------SCC-----CEEETTEECCGGGCHHHHHHHHHHHHSCC
T ss_pred eEEEEEEecCcccCcccc-cceeeccCCCc-C-----------Ccc-----ccccccccccccccHHHHHHHHHHHHcCC
Confidence 999999987654331000 00000000000 0 000 00000000011223456788999999999
Q ss_pred eEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEE
Q 001335 517 VLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVC 596 (1097)
Q Consensus 517 ~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv 596 (1097)
+....++..+.+ ...+||+|.|++.++++.|+ +.. ....+...+... .........|++++.+||+|+||||||++
T Consensus 424 ~~~~~~~~~~~~-~~~g~p~E~Al~~~a~~~g~-~~~-~~~~i~~~~~~~-~~~~~~~~~~~~~~~~pF~s~rk~msvi~ 499 (995)
T 3ar4_A 424 SSLDFNETKGVY-EKVGEATETALTTLVEKMNV-FNT-EVRNLSKVERAN-ACNSVIRQLMKKEFTLEFSRDRKSMSVYC 499 (995)
T ss_dssp CEEEEETTTTEE-EEESCHHHHHHHHHHHHHCT-TCC-CCTTSCTTTSTT-HHHHHHHHHEEEEEEEEEETTTTEEEEEE
T ss_pred CcccccCCCCce-eecCCccHHHHHHHHHHcCC-ccc-cccccccccccc-cchhhhhhhCceEEEeecCCCCCeeEEEE
Confidence 876543322222 23489999999999999887 211 100000000000 00000134689999999999999999999
Q ss_pred EecCC-----cEEEEEecchhHHHHHhhcC---------chhHHHHHHHHHHHH--HhcCCeEEEEEEEecCHHHHHHHH
Q 001335 597 RYADG-----RLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQF--GSSGLRTLCLAYRDLSPDMYERWN 660 (1097)
Q Consensus 597 ~~~~~-----~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~--a~~GlR~l~~A~r~l~~~~~~~~~ 660 (1097)
+.++| ++.+|+|||||.|+++|... +.+.++.+.+++++| +++|+|||++|||+++..+.
T Consensus 500 ~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~---- 575 (995)
T 3ar4_A 500 SPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE---- 575 (995)
T ss_dssp EESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----
T ss_pred ecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc----
Confidence 98666 68999999999999999642 234567788899999 99999999999999864210
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 661 EKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 661 ~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
...+.+ ...++.+|+|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.++|+++||..
T Consensus 576 ------~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~ 644 (995)
T 3ar4_A 576 ------EMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFG 644 (995)
T ss_dssp ------GCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSC
T ss_pred ------cccccc-----chhhhhhccCcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCC
Confidence 001111 113467899999999999999999999999999999999999999999999999999999976
Q ss_pred CCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHH
Q 001335 741 NEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILL 820 (1097)
Q Consensus 741 ~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~ 820 (1097)
.+... . ..+++|+++..+.++++.+...
T Consensus 645 ~~~~i-----~-----------------------------------------------~~~~~g~~~~~l~~~~~~~~~~ 672 (995)
T 3ar4_A 645 ENEEV-----A-----------------------------------------------DRAYTGREFDDLPLAEQREACR 672 (995)
T ss_dssp TTCCC-----T-----------------------------------------------TTEEEHHHHHTSCHHHHHHHHH
T ss_pred CCCcc-----c-----------------------------------------------ceEEEchhhhhCCHHHHHHHHh
Confidence 43210 0 0134454444332223333222
Q ss_pred hhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--
Q 001335 821 NLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF-- 897 (1097)
Q Consensus 821 ~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~-- 897 (1097)
+..+|||++|+||.++|+.+|+ .|+.|+|+|||.||++||++||+||||+ |++. |+++||+++.++++
T Consensus 673 ------~~~v~~r~~P~~K~~~v~~l~~-~g~~v~~~GDG~ND~~alk~Advgiamg~g~~~--ak~aAd~vl~~~~~~~ 743 (995)
T 3ar4_A 673 ------RACCFARVEPSHKSKIVEYLQS-YDEITAMTGDGVNDAPALKKAEIGIAMGSGTAV--AKTASEMVLADDNFST 743 (995)
T ss_dssp ------HCCEEESCCSSHHHHHHHHHHT-TTCCEEEEECSGGGHHHHHHSTEEEEETTSCHH--HHHTCSEEETTCCHHH
T ss_pred ------hCcEEEEeCHHHHHHHHHHHHH-CCCEEEEEcCCchhHHHHHHCCeEEEeCCCCHH--HHHhCCEEECCCCHHH
Confidence 2459999999999999999999 5899999999999999999999999994 4444 89999999987666
Q ss_pred HHHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhh
Q 001335 898 LTDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASL 977 (1097)
Q Consensus 898 l~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~ 977 (1097)
+.++ +.|||++|+|+++++.|.+++|+...++.+++.++. + ..++.++|++|+|++++.+|++++++.+. +++.
T Consensus 744 i~~~-i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g-~--~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~ 817 (995)
T 3ar4_A 744 IVAA-VEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALG-L--PEALIPVQLLWVNLVTDGLPATALGFNPP--DLDI 817 (995)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C--CCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTG
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--cchHHHHHHHHHHHHHHHHHHHhhccCCC--ChhH
Confidence 5665 899999999999999999999999988888877663 2 24578899999999999999999998543 3455
Q ss_pred hhcCchhhhhcccccccCHHHHHHHHHHHHHHHHHHHHhhh-hcC-CC-c--cC-----------CCCcc--------ch
Q 001335 978 SKKYPQLYQEGIKNVFFTWRVVAIWAFFSVYQSLVLYNCVT-TSS-AT-G--QN-----------SSGKI--------FG 1033 (1097)
Q Consensus 978 ~~~~P~ly~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~-~~~-~~-~--~~-----------~~g~~--------~~ 1033 (1097)
+.+.|. .+++.+++++.++.|++.|+++++++++.++ ++. .. . .. .++.. ..
T Consensus 818 m~~~P~----~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 893 (995)
T 3ar4_A 818 MDRPPR----SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFE 893 (995)
T ss_dssp GGSCCC----CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGG
T ss_pred HhCCCC----CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccchhcccccccccccccccccccccc
Confidence 555554 6678899999999999999999988765433 221 10 0 00 00000 01
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhcc-c---c--hHHHHHHHHHHHHHHHHHHHHHhccC
Q 001335 1034 IWDVSTMAFTCVVVTVNLRLLMMCN-T---I--TRFHYITVGGSILAWFLFVFLYTGIM 1086 (1097)
Q Consensus 1034 ~~~~~~~~~~~~v~~~~~~~~~~~~-~---~--~~~~~~~~~~si~~~~~~~~~~~~~~ 1086 (1097)
....+|++|++++++..++.+...+ . | ..+.+..+++++++.+++++++.++|
T Consensus 894 ~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p 952 (995)
T 3ar4_A 894 APEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVD 952 (995)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHST
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 1246888999888877766543211 1 1 23455666666666666555555555
No 3
>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A
Probab=100.00 E-value=1.7e-103 Score=1010.26 Aligned_cols=834 Identities=19% Similarity=0.215 Sum_probs=630.9
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccC--c---c----cCcccchhhHHHHHHHHHHH
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPM--S---P----VNPVTNVVPLSLVLLVSLIK 123 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~--~---~----~~~~~~~~~l~~vl~is~~~ 123 (1097)
.|+++||+|+++.+|...+. +.|++||.++++++++++++++++.+ . . .+.+...++++++++++++.
T Consensus 75 ~r~~~~G~N~l~~~~~~~~~---~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~ 151 (1028)
T 2zxe_A 75 EILARDGPNSLTPPPTTPEW---IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCF 151 (1028)
T ss_dssp HHHHHHCCSCCCCCCCCCHH---HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCCHH---HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHH
Confidence 47889999999987544332 89999999999999999999987641 1 0 01233455677888899999
Q ss_pred HHHHHHHHhhchhh---hcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcc
Q 001335 124 EAWEDWKRFQNDMT---INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGET 200 (1097)
Q Consensus 124 ~~~ed~~r~k~~~~---~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs 200 (1097)
++++++|..++.+. +.+++++|+|||++++|++++|+|||||.|++||.||||++|++|++ |+||||+|||||
T Consensus 152 ~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGES 227 (1028)
T 2zxe_A 152 SYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGES 227 (1028)
T ss_dssp HHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCCCC
Confidence 99999887776554 45789999999999999999999999999999999999999999975 899999999999
Q ss_pred cceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCc
Q 001335 201 NLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHE 280 (1097)
Q Consensus 201 ~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~ 280 (1097)
.|+.|.+.+.. ..|++.+|++++||.+.+ |+++|+|++||++
T Consensus 228 ~pv~K~~~~~~-------------------------------------~~~~~~~n~v~~GT~v~~-G~~~~~V~~tG~~ 269 (1028)
T 2zxe_A 228 EPQTRSPEFSS-------------------------------------ENPLETRNIAFFSTNCVE-GTARGVVVYTGDR 269 (1028)
T ss_dssp SCEECCSSCCC-------------------------------------SSTTTCSSEECTTCEEEE-EEEEEEEEECGGG
T ss_pred cceecccCCCC-------------------------------------CCcccccceEEeCceEEc-ceEEEEEEEeccc
Confidence 99999876411 115677899999999987 6799999999999
Q ss_pred ccee---eccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHH
Q 001335 281 TKVM---MNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVF 357 (1097)
Q Consensus 281 Tk~~---~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~ 357 (1097)
|+++ ++...++.+++++|+.+++++.+++.+.++++++.+++..+ .... +
T Consensus 270 T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~~--------------------------~ 322 (1028)
T 2zxe_A 270 TVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI-LGYS--------------------------W 322 (1028)
T ss_dssp SHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCC--------------------------H
T ss_pred cHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCc--------------------------H
Confidence 9664 45556788899999999999999999888888877665432 2111 3
Q ss_pred HHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecce
Q 001335 358 VLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLM 437 (1097)
Q Consensus 358 ~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m 437 (1097)
...+..++.+++.+||++||++++++.+++ +.++ +++++++|+++.+|+||++++||||||||||+|+|
T Consensus 323 ~~~~~~~i~llv~~iP~~Lp~~vti~l~~~-~~~m----------ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m 391 (1028)
T 2zxe_A 323 LEAVIFLIGIIVANVPEGLLATVTVCLTLT-AKRM----------ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRM 391 (1028)
T ss_dssp HHHHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSC
T ss_pred HHHHHHHHHHHHHHcCchHHHHHHHHHHHH-HHHH----------hhCCceeccchHhhhhcCceEEeccCCCCCCCCeE
Confidence 345667778888899999999999999999 8876 78899999999999999999999999999999999
Q ss_pred EEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccce
Q 001335 438 EFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTV 517 (1097)
Q Consensus 438 ~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~ 517 (1097)
+|.++++++..|.....+.+ .+.. .+..++..+.++.++++||++
T Consensus 392 ~v~~~~~~~~~~~~~~~~~~-----------------------~~~~------------~~~~~~~~~~l~~~~alc~~~ 436 (1028)
T 2zxe_A 392 TVAHMWFDNQIHEADTTENQ-----------------------SGAA------------FDKTSATWSALSRIAALCNRA 436 (1028)
T ss_dssp EEEEEEETTEEEECCCCTTC-----------------------CSCC------------CCSSCHHHHHHHHHHHHSCCC
T ss_pred EEEEEEECCeeeeccCCCCc-----------------------cccc------------cccCCHHHHHHHHHHHhcCCC
Confidence 99999998876643211000 0000 001223456788999999999
Q ss_pred EeccCCCCCc--eEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEE
Q 001335 518 LPEGDESPER--ITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVV 595 (1097)
Q Consensus 518 ~~~~~~~~~~--~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsvi 595 (1097)
..+.+++... -.+..+||+|.||+++|++.|..... ....|+++..+||+|+||||+++
T Consensus 437 ~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~-------------------~~~~~~~~~~~pF~s~rk~msvi 497 (1028)
T 2zxe_A 437 VFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQG-------------------MRDRNPKIVEIPFNSTNKYQLSI 497 (1028)
T ss_dssp EECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHH-------------------HHHHSCEEEEECCCTTTCEEEEE
T ss_pred eeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHH-------------------HHHhCceEEEeccCcccceEEEE
Confidence 8754322111 11235899999999999876421000 12347788999999999999999
Q ss_pred EEec---CCcEEEEEecchhHHHHHhhcC---------chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHH
Q 001335 596 CRYA---DGRLVLYCKGADSVIYERLANG---------NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKF 663 (1097)
Q Consensus 596 v~~~---~~~~~l~~KGa~~~i~~~~~~~---------~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~ 663 (1097)
++.+ ++++++|+|||||.|+++|... +.+.++.+.+++++|+++|+|||++|||+++++++.++.+
T Consensus 498 ~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~~-- 575 (1028)
T 2zxe_A 498 HENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYP-- 575 (1028)
T ss_dssp EECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTCC--
T ss_pred EeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccc--
Confidence 9974 5788999999999999999741 2345677889999999999999999999997654322100
Q ss_pred HHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCC
Q 001335 664 IQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEM 743 (1097)
Q Consensus 664 ~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~ 743 (1097)
. +++ ..+.+|+|++|+|+++++||+|++++++|++|+++||++||+|||+..||.++|++|||...+.
T Consensus 576 ------~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~ 643 (1028)
T 2zxe_A 576 ------F-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGN 643 (1028)
T ss_dssp ------C-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTC
T ss_pred ------c-chh-----hhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCc
Confidence 0 000 0123578999999999999999999999999999999999999999999999999999975432
Q ss_pred eEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhh-cccccCCCeEEEEEcCccchhhcChhHHHHHHhh
Q 001335 744 KQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQ-YIHSISGEKLALIIDGKCLMYALDPSLRVILLNL 822 (1097)
Q Consensus 744 ~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l 822 (1097)
.. +.+ .. ...+. ............+++|.++....++++. ++
T Consensus 644 ~~---------i~~-----------------~~-------~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~----~~ 686 (1028)
T 2zxe_A 644 ET---------IED-----------------IA-------ARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD----DI 686 (1028)
T ss_dssp CC---------HHH-----------------HH-------HHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHH----HH
T ss_pred hh---------HHH-----------------HH-------hhcCcchhhccccccceEEEEcHHhhhCCHHHHH----HH
Confidence 11 000 00 00000 0000112233568889887765443333 33
Q ss_pred hccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec--CccchhhhhhcceeccchHh--H
Q 001335 823 SLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS--GQEGMQAVMASDFAIAQFRF--L 898 (1097)
Q Consensus 823 ~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~--g~e~~~a~~~AD~vi~~~~~--l 898 (1097)
...++.++|||++|+||..+|+.+|+ .|++|+|+|||.||++||++|||||||+ |++. |+++||+++.++++ +
T Consensus 687 ~~~~~~~v~ar~~P~~K~~iV~~lq~-~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~--ak~aAD~Vl~~~~~~~I 763 (1028)
T 2zxe_A 687 LHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV--SKQAADMILLDDNFASI 763 (1028)
T ss_dssp HHHCSEEEEESCCHHHHHHHHHHHHH-TTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH--HHHHCSEEETTCCTHHH
T ss_pred HhhCCcEEEEEcCHHHHHHHHHHHHh-CCCEEEEEcCCcchHHHHHhCCceEEeCCccCHH--HHHhcCEEecCCCHHHH
Confidence 44455679999999999999999999 6899999999999999999999999995 4454 89999999998655 6
Q ss_pred HHHHHhhhhhhHHHHhHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhh
Q 001335 899 TDLLLVHGRWSYLRICKVVLYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLS 978 (1097)
Q Consensus 899 ~~lll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~ 978 (1097)
.++ +.|||++|+|+++++.|.+++|+..+++.+++.++.. ..++.+++++|+|++++.+|+++++. |+ +.++.+
T Consensus 764 ~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa~al~~-e~-~~~~~m 837 (1028)
T 2zxe_A 764 VTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPAISLAY-EQ-AESDIM 837 (1028)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHHHHGGG-CC-CSSCGG
T ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---cchhHHHHHHHHHHHHHHHHHHHhcc-Cc-cchhhh
Confidence 666 8999999999999999999999999888888777632 23478899999999999999999985 43 334444
Q ss_pred hcCchhhhhccc-ccccCHHHHHH-HHHHHHHHHHHHHHhhh-hcCCCcc-------------C--------CCCccc--
Q 001335 979 KKYPQLYQEGIK-NVFFTWRVVAI-WAFFSVYQSLVLYNCVT-TSSATGQ-------------N--------SSGKIF-- 1032 (1097)
Q Consensus 979 ~~~P~ly~~~~~-~~~~~~~~~~~-~~~~~~~~~~~if~~~~-~~~~~~~-------------~--------~~g~~~-- 1032 (1097)
.+.|. .++ +++++++.++. |+..|++++++.|+.++ .+...++ . ..|...
T Consensus 838 ~~~Pr----~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1028)
T 2zxe_A 838 KRQPR----NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTY 913 (1028)
T ss_dssp GSCCC----CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTCCCEECTTSCEECH
T ss_pred ccCCC----CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccccccccccccccch
Confidence 44453 333 48999998776 56789999988876554 2211110 0 011110
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHh-cccchH----HHHHHHHHHHHHHHHHHHHHhccCC
Q 001335 1033 -----GIWDVSTMAFTCVVVTVNLRLLMM-CNTITR----FHYITVGGSILAWFLFVFLYTGIMT 1087 (1097)
Q Consensus 1033 -----~~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~----~~~~~~~~si~~~~~~~~~~~~~~~ 1087 (1097)
......|++|+++++.+.+..+.. ++..++ +.+..+|+++++.+++++++.++|+
T Consensus 914 ~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~ 978 (1028)
T 2zxe_A 914 EQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPG 978 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTT
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhh
Confidence 112568999999988877776543 333332 2456777777777777777777774
No 4
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=100.00 E-value=6.1e-96 Score=915.00 Aligned_cols=735 Identities=16% Similarity=0.182 Sum_probs=550.6
Q ss_pred CCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCcccCcccchhhHHHHHHHHHHHHHHHHHHHh
Q 001335 53 NQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMSPVNPVTNVVPLSLVLLVSLIKEAWEDWKRF 132 (1097)
Q Consensus 53 ~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~~~~~~~~~~~l~~vl~is~~~~~~ed~~r~ 132 (1097)
.|+++||+|+++.+|+++| +.|++||..+++++++++++++++. ..|..++ .++++++++++.+++++++..
T Consensus 95 ~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~---g~~~~~~-~i~~vv~i~~~i~~~qe~~a~ 166 (920)
T 1mhs_A 95 QRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGL---EDWVDFG-VICGLLLLNAVVGFVQEFQAG 166 (920)
T ss_dssp HHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTC---SCSSHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHH---HhHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999888876 7889999999999999999998874 3444443 455677788888999999999
Q ss_pred hchhhhc---CceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccc
Q 001335 133 QNDMTIN---STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALE 209 (1097)
Q Consensus 133 k~~~~~n---~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~ 209 (1097)
++.+.++ +.+++|+|||++++|++++|+|||||.|++||.||||++|+++++ .+.||||+|||||.|+.|.+.+
T Consensus 167 ~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K~~gd 243 (920)
T 1mhs_A 167 SIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDKHKGD 243 (920)
T ss_dssp HHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEECCSSC
T ss_pred HHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCc---eeeeeccccCCCCcceEecCCC
Confidence 8876655 578999999999999999999999999999999999999999872 1699999999999999998754
Q ss_pred cccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceeecc--
Q 001335 210 RTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMMNS-- 287 (1097)
Q Consensus 210 ~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~~~-- 287 (1097)
..|+||++.+|. +.++|++||.+|++++..
T Consensus 244 ---------------------------~v~sGT~v~~G~---------------------~~~~V~~tG~~T~~g~I~~l 275 (920)
T 1mhs_A 244 ---------------------------QVFASSAVKRGE---------------------AFVVITATGDNTFVGRAAAL 275 (920)
T ss_dssp ---------------------------EECSCBCCSCCC---------------------EEEEEEECSTTCSTTTTTSS
T ss_pred ---------------------------eeecCceEecce---------------------EEEEEEEeCCcCHHHHHHHH
Confidence 567777666665 999999999999876643
Q ss_pred -CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHHHHHHH
Q 001335 288 -MNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNMFTLIT 366 (1097)
Q Consensus 288 -~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 366 (1097)
...+.+++++++.++++..+++++.++++++.++.+. | ... .+...|..++.
T Consensus 276 v~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~--------~-~~~------------------~~~~~l~~av~ 328 (920)
T 1mhs_A 276 VNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF--------Y-RSN------------------PIVQILEFTLA 328 (920)
T ss_dssp CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--------T-TTC------------------CHHHHHHHHHH
T ss_pred HhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------h-cCC------------------cHHHHHHHHHH
Confidence 4566778999999999998887777666655433211 1 000 14557778899
Q ss_pred HhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcc
Q 001335 367 LYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGG 446 (1097)
Q Consensus 367 l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~ 446 (1097)
+++.+||++||++++++.+++ +.++ +++++++|+++.+|+||++|+||||||||||+|+|+|.+++..+
T Consensus 329 llV~aiP~aLp~~vti~la~g-~~~m----------ak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~ 397 (920)
T 1mhs_A 329 ITIIGVPVGLPAVVTTTMAVG-AAYL----------AKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA 397 (920)
T ss_dssp HHHHHSCCCHHHHHHHHHHHH-HHHH----------HHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCS
T ss_pred HHHHhCchhHHHHHHHHHHHH-HHHH----------HhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecC
Confidence 999999999999999999998 8776 77899999999999999999999999999999999998764321
Q ss_pred eeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCC
Q 001335 447 EIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPE 526 (1097)
Q Consensus 447 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~ 526 (1097)
.. ++ .+++.+.++|+....
T Consensus 398 g~-------------------------------------------------~~-----~~ll~~a~l~~~~~~------- 416 (920)
T 1mhs_A 398 GV-------------------------------------------------DP-----EDLMLTACLAASRKK------- 416 (920)
T ss_dssp CC-------------------------------------------------CC-----THHHHHHHHSCCCSS-------
T ss_pred CC-------------------------------------------------CH-----HHHHHHHHHhcCCcc-------
Confidence 00 00 124556677765311
Q ss_pred ceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEE
Q 001335 527 RITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLY 606 (1097)
Q Consensus 527 ~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~ 606 (1097)
..+||+|.|+++++++.+... + ....|++++.+||+|.||||+++++.++|+.+++
T Consensus 417 ----~~~~P~e~Al~~~~~~~~~~~------------------~--~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~ 472 (920)
T 1mhs_A 417 ----KGIDAIDKAFLKSLKYYPRAK------------------S--VLSKYKVLQFHPFDPVSKKVVAVVESPQGERITC 472 (920)
T ss_dssp ----CSCCSHHHHHHHHHHHSSSCC------------------G--GGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEE
T ss_pred ----cCCChHHHHHHHHHHhcccch------------------h--hccccceeEEeeccCCCCeEEEEEEeCCCcEEEE
Confidence 024999999999998766310 0 0234778899999999999999998778888899
Q ss_pred EecchhHHHHHhhcC---chhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Q 001335 607 CKGADSVIYERLANG---NEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAEL 683 (1097)
Q Consensus 607 ~KGa~~~i~~~~~~~---~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~ 683 (1097)
+||||+.|+++|... +.+.++.+.+++++|+.+|+||+++|+|..
T Consensus 473 ~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~~-------------------------------- 520 (920)
T 1mhs_A 473 VKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG-------------------------------- 520 (920)
T ss_dssp EEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCSS--------------------------------
T ss_pred EeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEecc--------------------------------
Confidence 999999999999752 334567788899999999999999999741
Q ss_pred HhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCC
Q 001335 684 IEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGD 763 (1097)
Q Consensus 684 iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~ 763 (1097)
|++++|+|+++++||+|++++++|++|+++||++||+|||++.||.+||+++||.... ++.+.
T Consensus 521 -e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~-----~~~~~----------- 583 (920)
T 1mhs_A 521 -EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI-----YNAER----------- 583 (920)
T ss_dssp -SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC-----CCSSS-----------
T ss_pred -ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc-----cCccc-----------
Confidence 4689999999999999999999999999999999999999999999999999996421 00000
Q ss_pred hHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHH
Q 001335 764 PVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVT 843 (1097)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv 843 (1097)
++++|.. .+.++++. +.. .+..+|+|++|+||.++|
T Consensus 584 ------------------------------------~~~~g~~--~~~~~el~----~~~--~~~~V~arv~P~~K~~iV 619 (920)
T 1mhs_A 584 ------------------------------------LGLGGGG--DMPGSEVY----DFV--EAADGFAEVFPQHKYNVV 619 (920)
T ss_dssp ------------------------------------SSSCBCC--CGGGGGGG----TTT--TTTSCEESCCSTHHHHHH
T ss_pred ------------------------------------eeecCcc--cCCHHHHH----HHH--hhCeEEEEeCHHHHHHHH
Confidence 0111110 00011111 111 123499999999999999
Q ss_pred HHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHHHhhhhhhHHHHhHHHHHH
Q 001335 844 SLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLLLVHGRWSYLRICKVVLYF 920 (1097)
Q Consensus 844 ~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~~~~~i~~~i~~~ 920 (1097)
+.+|+ .|+.|+|+|||.||++||++|||||||+ |++. |+++||+++.++++ +..+ +.+||++|+|+++++.|.
T Consensus 620 ~~Lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADiVl~~~~~~~I~~a-i~~gR~~~~ni~k~i~~~ 695 (920)
T 1mhs_A 620 EILQQ-RGYLVAMTGDGVNDAPSLKKADTGIAVEGSSDA--ARSAADIVFLAPGLGAIIDA-LKTSRQIFHRMYAYVVYR 695 (920)
T ss_dssp HHHHT-TTCCCEECCCCGGGHHHHHHSSEEEEETTSCHH--HHHSSSEEESSCCSHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-CCCeEEEEcCCcccHHHHHhCCcCcccccccHH--HHHhcCeEEcCCCHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99999 6899999999999999999999999995 3443 89999999998777 5555 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHHHHH
Q 001335 921 FYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWRVVA 1000 (1097)
Q Consensus 921 ~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~~~~ 1000 (1097)
++.|+.+.+..+++..+.+++ +++.+++|.|++.+. |++++++...+. + +.|. .++.. +.+.
T Consensus 696 l~~n~~~~~~~~~~~~~~~~~----l~~~~il~~~l~~d~-~~lal~~e~~~~--~---~~P~----~~~~~----~~~~ 757 (920)
T 1mhs_A 696 IALSIHLEIFLGLWIAILNRS----LNIELVVFIAIFADV-ATLAIAYDNAPY--S---QTPV----KWNLP----KLWG 757 (920)
T ss_dssp HHHHHHHHHHHHHHHHSCSCC----CCHHHHHHHHHHHTT-HHHHCCCCCSGG--G---GSCC----CCCSS----SCSS
T ss_pred HHHHHHHHHHHHHHHHHHhcc----CCHHHHHHHHHHHHH-HhhhhcccCccc--c---cCCC----CchHH----HHHH
Confidence 999998754444444444443 456677788877775 999998744322 1 3343 11111 1112
Q ss_pred HHHHHHHHHHHHHHHhhh-hcCCCccCCCCccchhhHHHHHHHHHHHHHHHHHHHHh-ccc--chHHHHHHHHHHHHHHH
Q 001335 1001 IWAFFSVYQSLVLYNCVT-TSSATGQNSSGKIFGIWDVSTMAFTCVVVTVNLRLLMM-CNT--ITRFHYITVGGSILAWF 1076 (1097)
Q Consensus 1001 ~~~~~~~~~~~~if~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~--~~~~~~~~~~~si~~~~ 1076 (1097)
..++.|++.++..++.+. .+... ..+|.........|++|+++++...+.++.. +.. |.-..+..+++++++..
T Consensus 758 ~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~ 835 (920)
T 1mhs_A 758 MSVLLGVVLAVGTWITVTTMYAQG--ENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPSWQLSGAIFLVD 835 (920)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTT--TTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--ccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchHHHHHHHHHHHH
Confidence 223456666655444333 22110 0111111122478999999998887776532 111 22224455666666666
Q ss_pred HHHHHHhccC
Q 001335 1077 LFVFLYTGIM 1086 (1097)
Q Consensus 1077 ~~~~~~~~~~ 1086 (1097)
++..++.++|
T Consensus 836 ~~~~~~~~~~ 845 (920)
T 1mhs_A 836 ILATCFTIWG 845 (920)
T ss_dssp HHHHHHHSSS
T ss_pred HHHHHHHHhh
Confidence 6666666666
No 5
>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}
Probab=100.00 E-value=7.4e-94 Score=897.88 Aligned_cols=677 Identities=17% Similarity=0.198 Sum_probs=509.2
Q ss_pred CCCCCCCCCCeeeccCccccccchHHHHHHhhhhHHHHHHHHhhhccccCc----ccCcccchhhHHHHHHHHHHHHHHH
Q 001335 52 ANQPLRFKGNSIATTKYNVLTFLPKGLFEQFRRVANCYFLMISILSTTPMS----PVNPVTNVVPLSLVLLVSLIKEAWE 127 (1097)
Q Consensus 52 ~~~~~~~g~N~i~~~ky~~~~flp~~l~~qf~~~~n~~fl~~~il~~~~~~----~~~~~~~~~~l~~vl~is~~~~~~e 127 (1097)
+.|+++||+|+++.++++.| +.|++||.+|++++++++++++++... +..|..++ .++++++++.+.+.++
T Consensus 39 ~~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~-~I~~~v~i~~~l~~~q 113 (885)
T 3b8c_A 39 EDRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFV-GIICLLVINSTISFIE 113 (885)
T ss_dssp HHHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHH-HHHHHTTTTTTTTTTT
T ss_pred HHHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHH-HHHHHHHHHHHHHHHH
Confidence 34789999999999887776 667799999999999999999887411 12455554 4445666777778888
Q ss_pred HHHHhhchhh---hcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCccccee
Q 001335 128 DWKRFQNDMT---INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKI 204 (1097)
Q Consensus 128 d~~r~k~~~~---~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~ 204 (1097)
++|..++.+. +.+.+++|+|||++++|++++|+|||||.|++||.||||++|++|++ |.||||+|||||.|+.
T Consensus 114 e~ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~ 189 (885)
T 3b8c_A 114 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVT 189 (885)
T ss_dssp TTTTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCC
T ss_pred HHHHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcceE
Confidence 8877776554 35788999999999999999999999999999999999999999885 6899999999999999
Q ss_pred ecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCcccee
Q 001335 205 RKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVM 284 (1097)
Q Consensus 205 K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~ 284 (1097)
|.+.+ ..|+||.+.+|. +.++|++||.+|.++
T Consensus 190 K~~g~---------------------------~v~~GT~v~~G~---------------------~~~~V~~tG~~T~~g 221 (885)
T 3b8c_A 190 KHPGQ---------------------------EVFSGSTCKQGE---------------------IEAVVIATGVHTFFG 221 (885)
T ss_dssp BSSCC---------------------------CCCSCCCCCSCC---------------------CCCBCCSCTTTTTST
T ss_pred ecCCC---------------------------ccccCeEEeeeE---------------------EEEEEEEcCcccHHH
Confidence 98654 456666666555 899999999999876
Q ss_pred eccC--CCCCcccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhhcccccccccccCCCCCccCCCCCCChhHHHHHHHH
Q 001335 285 MNSM--NIPSKRSTLERKLDKLILALFA-TLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDDQFNPDKRFLVFVLNM 361 (1097)
Q Consensus 285 ~~~~--~~~~k~s~l~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (1097)
+... +...+++++|+.++++..+++. +++.++++.++.+.+ .. .. +...+
T Consensus 222 ~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~-~~-------------------------~~~~~ 274 (885)
T 3b8c_A 222 KAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI-QR-RK-------------------------YRDGI 274 (885)
T ss_dssp TCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTTT-TC-SC-------------------------STTHH
T ss_pred HHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cc-Cc-------------------------HHHHH
Confidence 5432 2256789999999999876433 222222222111111 00 00 12357
Q ss_pred HHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEecCCCceeecceEEEE
Q 001335 362 FTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFK 441 (1097)
Q Consensus 362 ~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~ 441 (1097)
..++.+++.+||++||++++++.+++ +.++ +++++++|+++.+|+||++|+||||||||||+|+|+|.+
T Consensus 275 ~~~v~llv~aiP~aLp~~vti~la~g-~~r~----------ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~ 343 (885)
T 3b8c_A 275 DNLLVLLIGGIPIAMPTVLSVTMAIG-SHRL----------SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDK 343 (885)
T ss_dssp HHHHHHTTTTCCSSTTTHHHHTTTHH-HHHH----------TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH-HHHH----------HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEE
Confidence 78999999999999999999998888 7766 889999999999999999999999999999999999863
Q ss_pred EEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEecc
Q 001335 442 CSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEG 521 (1097)
Q Consensus 442 ~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~ 521 (1097)
+.+. .++.+ . ...+++...++|+...
T Consensus 344 ~~~~--~~~~~----------------------------------------------~---~~~~ll~~aa~~~~~~--- 369 (885)
T 3b8c_A 344 NLVE--VFCKG----------------------------------------------V---EKDQVLLFAAMASRVE--- 369 (885)
T ss_dssp CCCC--SSCSS----------------------------------------------T---THHHHHHHHHHHCCSS---
T ss_pred EEEe--ccCCC----------------------------------------------C---CHHHHHHHHHHHhCCC---
Confidence 2210 00000 0 1134667778887531
Q ss_pred CCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCC
Q 001335 522 DESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADG 601 (1097)
Q Consensus 522 ~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 601 (1097)
.+||.|.|+++++.+.. . ....+++++.+||+|.||||+++++..+|
T Consensus 370 ----------~~~p~~~Al~~~~~~~~---------~--------------~~~~~~~~~~~pF~s~~k~~sv~~~~~~g 416 (885)
T 3b8c_A 370 ----------NQDAIDAAMVGMLADPK---------E--------------ARAGIREVHFLPFNPVDKRTALTYIDGSG 416 (885)
T ss_dssp ----------SCCSHHHHHHHTTCCTT---------C--------------CCCSSCCBCCCCCCTTTCCCCCBBCSSSS
T ss_pred ----------CCCchHHHHHHHhhchh---------h--------------HhhcCceeecccCCcccceEEEEEEecCC
Confidence 37999999999764310 0 02336678889999999999999987778
Q ss_pred cEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 001335 602 RLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVA 681 (1097)
Q Consensus 602 ~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~ 681 (1097)
+.++++||||+.|+++|.... +.++.+.+++++|+++|+||+++|+|++++++.
T Consensus 417 ~~~~~~KGa~e~il~~c~~~~-~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~~------------------------- 470 (885)
T 3b8c_A 417 NWHRVSKGAPEQILELAKASN-DLSKKVLSIIDKYAERGLRSLAVARQVVPEKTK------------------------- 470 (885)
T ss_dssp CBCBCCCCSGGGTSSSSCCCS-TTTTTHHHHHHHHTTTTCEEEEECCBCCCSSSS-------------------------
T ss_pred cEEEEEeCCHHHHHHhccCch-hhHHHHHHHHHHHHhCCCeEEEEEEeccccccc-------------------------
Confidence 888999999999999997432 345567788999999999999999998875321
Q ss_pred HHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccC
Q 001335 682 ELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEER 761 (1097)
Q Consensus 682 ~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~ 761 (1097)
+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..||.++|+++||..+.. ...
T Consensus 471 ~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~-------~~~-------- 535 (885)
T 3b8c_A 471 ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMY-------PSS-------- 535 (885)
T ss_dssp SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCS-------TTS--------
T ss_pred cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccC-------Ccc--------
Confidence 34578999999999999999999999999999999999999999999999999999964210 000
Q ss_pred CChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhc-ChhHHHHHHhhhccCCceEEEEeCcccHH
Q 001335 762 GDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYAL-DPSLRVILLNLSLNCSSVVCCRVSPLQKA 840 (1097)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l-~~~l~~~f~~l~~~~~~vi~~r~sP~qK~ 840 (1097)
++.|.+++..+ +.++.+...+ ..+|+|++|+||.
T Consensus 536 ---------------------------------------~l~g~~~~~~~~~~~l~~~~~~------~~v~arv~P~~K~ 570 (885)
T 3b8c_A 536 ---------------------------------------ALLGTHKDANLASIPVEELIEK------ADGFAGVFPEHKY 570 (885)
T ss_dssp ---------------------------------------SCCBGGGGTTSCCSCHHHHHHT------SCCEECCCHHHHH
T ss_pred ---------------------------------------eeeccccccccchhHHHHHHhh------CcEEEEECHHHHH
Confidence 11122222111 1122222221 2389999999999
Q ss_pred HHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHHHhhhhhhHHHHhHHH
Q 001335 841 QVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLLLVHGRWSYLRICKVV 917 (1097)
Q Consensus 841 ~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~~~~~i~~~i 917 (1097)
++|+.+|+ .|+.|+|+|||.||++||++|||||||+ |++. |+++||+++.++++ +..+ +.+||++|+|+++++
T Consensus 571 ~iV~~lq~-~g~~Vam~GDGvNDapaLk~AdvGIAmg~gtd~--ak~aADivl~~~~~~~I~~a-i~~gR~~~~ni~~~i 646 (885)
T 3b8c_A 571 EIVKKLQE-RKHIVGMTGDGVNDAPALKKADIGIAVADATDA--ARGASDIVLTEPGLSVIISA-VLTSRAIFQRMKNYT 646 (885)
T ss_dssp HHHHHHHH-TTCCCCBCCCSSTTHHHHHHSSSCCCCSSSHHH--HGGGCSSCCSSCSHHHHTHH-HHTHHHHHHHHHHHH
T ss_pred HHHHHHHH-CCCeEEEEcCCchhHHHHHhCCEeEEeCCccHH--HHHhcceeeccCchhHHHHH-HHHHHHHHHHHHHHH
Confidence 99999998 6899999999999999999999999995 3333 88999999998877 4444 899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhHHHHHHhhccccCChhhhhcCchhhhhcccccccCHH
Q 001335 918 LYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTSMPVIMLGLFEKDVSASLSKKYPQLYQEGIKNVFFTWR 997 (1097)
Q Consensus 918 ~~~~~~ni~~~~~~~~~~~~~~fs~~~~~~~~~~~~~n~~~~~lp~~~l~~~~~d~~~~~~~~~P~ly~~~~~~~~~~~~ 997 (1097)
.|.+..|+...+..++..+ ++. .++.+++++|+|++.+..+ +.++. |. +.+ |+ .++.. ...+
T Consensus 647 ~~~l~~n~~~~~~~~~~~~--~~~--~~l~p~~il~i~l~~d~~~-l~l~~-~~-~~~------~~----~p~~~-~~~~ 708 (885)
T 3b8c_A 647 IYAVSITIRIVFGFMLIAL--IWE--FDFSAFMVLIIAILNDGTI-MTISK-DR-VKP------SP----TPDSW-KLKE 708 (885)
T ss_dssp HHHHHHTTTTTSTTHHHHS--SCS--SCSCHHHHHHHHHHHHTTT-CCCCC-CC-CCC------SS----CCCST-TTTT
T ss_pred HHHHHHHHHHHHHHHHHHH--ccC--cCcCHHHHHHHHHHHHHHH-Hhhcc-cc-cCc------cc----CCcch-hHHH
Confidence 9999999876555444443 222 2467899999999998875 56653 21 111 11 12222 2233
Q ss_pred HHHHHHHHHHHHHHHHHHhhh
Q 001335 998 VVAIWAFFSVYQSLVLYNCVT 1018 (1097)
Q Consensus 998 ~~~~~~~~~~~~~~~if~~~~ 1018 (1097)
.+..+++.|++++++.+++++
T Consensus 709 ~~~~~~~~g~~~~~~~~~~~~ 729 (885)
T 3b8c_A 709 IFATGVVLGGYQAIMTVIFFW 729 (885)
T ss_dssp TTTTHHHHHSSTHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455566788888887766544
No 6
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.4e-70 Score=675.09 Aligned_cols=491 Identities=18% Similarity=0.231 Sum_probs=404.5
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhh------cCceEEEee-CCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCc
Q 001335 115 LVLLVSLIKEAWEDWKRFQNDMTI------NSTPVEVLQ-GQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADG 187 (1097)
Q Consensus 115 ~vl~is~~~~~~ed~~r~k~~~~~------n~~~~~V~r-~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g 187 (1097)
+++++..+.+.+|.+.|+|+.+.+ .+++++|+| ||++++|++++|+|||+|.|++||.||||++|++|+
T Consensus 193 ~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~---- 268 (736)
T 3rfu_A 193 VITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGR---- 268 (736)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECc----
Confidence 444555677888998888875443 477888887 999999999999999999999999999999999977
Q ss_pred eEEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecC
Q 001335 188 VCYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNT 267 (1097)
Q Consensus 188 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt 267 (1097)
++||||+|||||.|+.|.+.+ .+|+||++.+|.
T Consensus 269 -~~VDES~LTGES~Pv~K~~gd---------------------------~v~~Gt~~~~G~------------------- 301 (736)
T 3rfu_A 269 -SFVDESMVTGEPIPVAKEASA---------------------------KVIGATINQTGS------------------- 301 (736)
T ss_dssp -EEEECSSSTTCSSCEEECTTC---------------------------EECTTCEEESCC-------------------
T ss_pred -eEeeecccCCccccEEeccCC---------------------------cCCCceEeccce-------------------
Confidence 799999999999999998876 677888888777
Q ss_pred CeEEEEEEEecCccce---eeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCcc
Q 001335 268 EYIIGAVIFAGHETKV---MMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVE 344 (1097)
Q Consensus 268 ~~~~gvVv~tG~~Tk~---~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~ 344 (1097)
+.+.|++||.+|.+ .+...+++.+++++|+.+|++..++++++++++++++++|.++....
T Consensus 302 --~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~~~-------------- 365 (736)
T 3rfu_A 302 --FVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGPQP-------------- 365 (736)
T ss_dssp --CCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSS--------------
T ss_pred --EEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc--------------
Confidence 89999999999954 45555667788999999999999999999999999888776553211
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEE
Q 001335 345 DDQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYI 424 (1097)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i 424 (1097)
.+...+..++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||++|+|
T Consensus 366 -----------~~~~~l~~ai~vlviacPcaL~la~p~a~~~~-~~~~----------a~~gilvk~~~alE~l~~v~~i 423 (736)
T 3rfu_A 366 -----------ALSYGLIAAVSVLIIACPCALGLATPMSIMVG-VGKG----------AQSGVLIKNAEALERMEKVNTL 423 (736)
T ss_dssp -----------STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHH-HHHH----------HHTTEEESCHHHHHHHTSCCEE
T ss_pred -----------hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHH-HHHH----------hhcceeechHHHHHHhcCCCEE
Confidence 02346888999999999999999999999998 7766 7789999999999999999999
Q ss_pred EecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHH
Q 001335 425 FSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDAC 504 (1097)
Q Consensus 425 ~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 504 (1097)
|||||||||+|+|++.++..++.. .
T Consensus 424 ~fDKTGTLT~g~~~v~~i~~~~~~-------------------------------------------------------~ 448 (736)
T 3rfu_A 424 VVDKTGTLTEGHPKLTRIVTDDFV-------------------------------------------------------E 448 (736)
T ss_dssp EECCBTTTBCSSCEEEEEEESSSC-------------------------------------------------------H
T ss_pred EEeCCCCCcCCceEEEEEEecCCC-------------------------------------------------------H
Confidence 999999999999999998733211 0
Q ss_pred HHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeec
Q 001335 505 KEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLE 584 (1097)
Q Consensus 505 ~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~ 584 (1097)
.+++...+.+ ++.++||++.|+++++++.|+.+. ...+
T Consensus 449 ~~~l~~aa~l--------------e~~s~hPla~Aiv~~a~~~~~~~~----------------------------~~~~ 486 (736)
T 3rfu_A 449 DNALALAAAL--------------EHQSEHPLANAIVHAAKEKGLSLG----------------------------SVEA 486 (736)
T ss_dssp HHHHHHHHHH--------------HHSSCCHHHHHHHHHHHTTCCCCC----------------------------CCSC
T ss_pred HHHHHHHHHH--------------hhcCCChHHHHHHHHHHhcCCCcc----------------------------Cccc
Confidence 1122222211 123579999999999998775421 1246
Q ss_pred CCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHH
Q 001335 585 FNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFI 664 (1097)
Q Consensus 585 F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~ 664 (1097)
|++.+++. +... .+|+. +.+|+++.+.+.... .....+.+++++.+|+|++++|+
T Consensus 487 f~~~~g~g-v~~~-~~g~~--~~~G~~~~~~~~~~~-----~~~~~~~~~~~~~~G~~vl~va~---------------- 541 (736)
T 3rfu_A 487 FEAPTGKG-VVGQ-VDGHH--VAIGNARLMQEHGGD-----NAPLFEKADELRGKGASVMFMAV---------------- 541 (736)
T ss_dssp CCCCTTTE-EEEC-SSSSC--EEEESHHHHHHHCCC-----CHHHHHHHHHHHHTTCEEEEEEE----------------
T ss_pred ccccCCce-EEEE-ECCEE--EEEcCHHHHHHcCCC-----hhHHHHHHHHHHhcCCeEEEEEE----------------
Confidence 77776653 3333 23332 345999887654322 12456678899999999999996
Q ss_pred HHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCe
Q 001335 665 QAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMK 744 (1097)
Q Consensus 665 ~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~ 744 (1097)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 542 ----------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~---- 595 (736)
T 3rfu_A 542 ----------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK---- 595 (736)
T ss_dssp ----------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC----
T ss_pred ----------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE----
Confidence 678999999999999999999999999999999999999999999999999831
Q ss_pred EEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhc
Q 001335 745 QFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSL 824 (1097)
Q Consensus 745 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~ 824 (1097)
T Consensus 596 -------------------------------------------------------------------------------- 595 (736)
T 3rfu_A 596 -------------------------------------------------------------------------------- 595 (736)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHH
Q 001335 825 NCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDL 901 (1097)
Q Consensus 825 ~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~l 901 (1097)
++++++|++|.++++.+++ .++.|+|+|||.||++||++||+||+|+ |++. ++++||+++.+.++ +..+
T Consensus 596 -----v~a~~~P~~K~~~v~~l~~-~g~~V~~vGDG~ND~paL~~AdvGIAmg~g~d~--a~~~AD~vl~~~~~~~i~~a 667 (736)
T 3rfu_A 596 -----VVAEIMPEDKSRIVSELKD-KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDV--AIESAGVTLLHGDLRGIAKA 667 (736)
T ss_dssp -----EECSCCHHHHHHHHHHHHH-HSCCEEEEECSSTTHHHHHHSSEEEEESSSCSH--HHHHCSEEECSCCSTTHHHH
T ss_pred -----EEEecCHHHHHHHHHHHHh-cCCEEEEEECChHhHHHHHhCCEEEEeCCccHH--HHHhCCEEEccCCHHHHHHH
Confidence 8899999999999999998 6899999999999999999999999994 4444 99999999987666 5555
Q ss_pred HHhhhhhhHHHHhHHHHHHHHHHHHHHHHH
Q 001335 902 LLVHGRWSYLRICKVVLYFFYKNLTFTLTQ 931 (1097)
Q Consensus 902 ll~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 931 (1097)
+.+||.+++++++++.|.|.+|++.+.+.
T Consensus 668 -i~~sr~t~~~i~qnl~~a~~yN~~~iplA 696 (736)
T 3rfu_A 668 -RRLSESTMSNIRQNLFFAFIYNVLGVPLA 696 (736)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999998875443
No 7
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=8.8e-69 Score=665.01 Aligned_cols=486 Identities=19% Similarity=0.253 Sum_probs=394.6
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhh------cCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCce
Q 001335 115 LVLLVSLIKEAWEDWKRFQNDMTI------NSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGV 188 (1097)
Q Consensus 115 ~vl~is~~~~~~ed~~r~k~~~~~------n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~ 188 (1097)
+++++..+.+.+|++.++|+.+.+ .+++++|+|||+++++++++|+|||+|.|++||.||||++|++|+
T Consensus 179 ~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~----- 253 (723)
T 3j09_A 179 LLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE----- 253 (723)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECC-----
Confidence 344445667889999988875443 467999999999999999999999999999999999999999977
Q ss_pred EEEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCC
Q 001335 189 CYIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTE 268 (1097)
Q Consensus 189 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~ 268 (1097)
|+||||+|||||.|+.|.+.+ .+|+|+++.+|.
T Consensus 254 ~~VdeS~LTGES~pv~K~~g~---------------------------~v~~Gt~~~~g~-------------------- 286 (723)
T 3j09_A 254 SYVDESMISGEPVPVLKSKGD---------------------------EVFGATINNTGV-------------------- 286 (723)
T ss_dssp EEEECHHHHCCSSCEEECTTC---------------------------EECTTCEECSSC--------------------
T ss_pred eEEecccccCCCcceeecCCC---------------------------eeccceEEecCc--------------------
Confidence 899999999999999998765 566666666555
Q ss_pred eEEEEEEEecCcc---ceeeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccC
Q 001335 269 YIIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVED 345 (1097)
Q Consensus 269 ~~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~ 345 (1097)
+.+.|++||.+| ++.+...+++.+++++|+.+|++..+++++++++++++++.|.++....
T Consensus 287 -~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~--------------- 350 (723)
T 3j09_A 287 -LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAP--------------- 350 (723)
T ss_dssp -EEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSSTTCT---------------
T ss_pred -EEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------------
Confidence 999999999999 4556667888899999999999999999998888888766543322110
Q ss_pred CCCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEE
Q 001335 346 DQFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIF 425 (1097)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~ 425 (1097)
+...+..++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||++|+||
T Consensus 351 -----------~~~~~~~~i~vlvia~P~aL~la~p~a~~~~-~~~~----------a~~gilvk~~~~lE~lg~v~~i~ 408 (723)
T 3j09_A 351 -----------LLFAFTTLIAVLVVACPCAFGLATPTALTVG-MGKG----------AELGILIKNADALEVAEKVTAVI 408 (723)
T ss_dssp -----------TCCSHHHHHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTTCEESSTTHHHHGGGCCEEE
T ss_pred -----------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH-HHHH----------HHCCeEEeChHHHHHhhcCCEEE
Confidence 1225778899999999999999999999988 7766 78899999999999999999999
Q ss_pred ecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHH
Q 001335 426 SDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACK 505 (1097)
Q Consensus 426 ~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 505 (1097)
||||||||+|+|+|.++...+.. ..
T Consensus 409 fDKTGTLT~g~~~v~~~~~~~~~-------------------------------------------------------~~ 433 (723)
T 3j09_A 409 FDKTGTLTKGKPEVTDLVPLNGD-------------------------------------------------------ER 433 (723)
T ss_dssp EEHHHHTSCSCCEEEEEEESSSC-------------------------------------------------------HH
T ss_pred EcCCCccccCceEEEEEEeCCCC-------------------------------------------------------HH
Confidence 99999999999999998764311 11
Q ss_pred HHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecC
Q 001335 506 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 585 (1097)
Q Consensus 506 ~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F 585 (1097)
+++...+.|.. .++||++.|+++++++.|+...... +|
T Consensus 434 ~~l~~aa~~e~--------------~s~hP~~~Ai~~~a~~~~~~~~~~~----------------------------~~ 471 (723)
T 3j09_A 434 ELLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE----------------------------KV 471 (723)
T ss_dssp HHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC----------------------------CC
T ss_pred HHHHHHHHHhc--------------cCCCchhHHHHHHHHhcCCCcCCcc----------------------------ce
Confidence 23444444322 2579999999999999886532210 01
Q ss_pred CCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHH
Q 001335 586 NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQ 665 (1097)
Q Consensus 586 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~ 665 (1097)
.+...+ ++.. .. +.+|+++.+.+... ...+.+.+++++++.+|+|++++|+
T Consensus 472 ~~~~g~-g~~~----~~---~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~va~----------------- 522 (723)
T 3j09_A 472 EVIAGE-GVVA----DG---ILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVAR----------------- 522 (723)
T ss_dssp EEETTT-EEEE----TT---EEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCEEEEEEE-----------------
T ss_pred EEecCC-ceEE----EE---EEECCHHHHHhcCC----CccHHHHHHHHHHHhcCCeEEEEEE-----------------
Confidence 111111 1111 22 34488876654322 2234677788999999999999996
Q ss_pred HHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeE
Q 001335 666 AKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQ 745 (1097)
Q Consensus 666 a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~ 745 (1097)
|++++|+++++|++|++++++|+.|+++||+++|+|||+..+|.++|+++|+..
T Consensus 523 ---------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~----- 576 (723)
T 3j09_A 523 ---------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL----- 576 (723)
T ss_dssp ---------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-----
T ss_pred ---------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-----
Confidence 679999999999999999999999999999999999999999999999999831
Q ss_pred EEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhcc
Q 001335 746 FIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLN 825 (1097)
Q Consensus 746 i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~ 825 (1097)
T Consensus 577 -------------------------------------------------------------------------------- 576 (723)
T 3j09_A 577 -------------------------------------------------------------------------------- 576 (723)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHH
Q 001335 826 CSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLL 902 (1097)
Q Consensus 826 ~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~ll 902 (1097)
++++++|++|..+++.+++ . +.|+|+|||.||++||++||+||+|+ |.+. ++++||+++.++++ +..+
T Consensus 577 ----~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~- 647 (723)
T 3j09_A 577 ----VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA- 647 (723)
T ss_dssp ----EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSTTHHHHHHSSEEEECCCCSCC--SSCCSSEECSSCCTTHHHHH-
T ss_pred ----EEccCCHHHHHHHHHHHhc-C-CeEEEEECChhhHHHHhhCCEEEEeCCCcHH--HHHhCCEEEeCCCHHHHHHH-
Confidence 8999999999999999998 4 89999999999999999999999994 4444 89999999977666 5555
Q ss_pred HhhhhhhHHHHhHHHHHHHHHHHHHHHHH
Q 001335 903 LVHGRWSYLRICKVVLYFFYKNLTFTLTQ 931 (1097)
Q Consensus 903 l~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 931 (1097)
+.+||++++++++++.|.|++|++.+...
T Consensus 648 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 676 (723)
T 3j09_A 648 IQLSRKTMSKIKQNIFWALIYNVILIPAA 676 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999998864443
No 8
>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=4.6e-69 Score=658.38 Aligned_cols=485 Identities=19% Similarity=0.249 Sum_probs=393.6
Q ss_pred HHHHHHHHHHHHHHHHhhchhh------hcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceE
Q 001335 116 VLLVSLIKEAWEDWKRFQNDMT------INSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVC 189 (1097)
Q Consensus 116 vl~is~~~~~~ed~~r~k~~~~------~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~ 189 (1097)
++++..+.+.+|++.++|+.+. +.+++++|+|||+++++++++|+|||+|.|++||.||||++|++|+ |
T Consensus 102 i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~-----~ 176 (645)
T 3j08_A 102 LLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----S 176 (645)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECc-----E
Confidence 3444466788899998876443 4578999999999999999999999999999999999999999977 8
Q ss_pred EEEccccCCcccceeecccccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCe
Q 001335 190 YIETANLDGETNLKIRKALERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEY 269 (1097)
Q Consensus 190 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~ 269 (1097)
+||||+|||||.|+.|.+.+ .+|+|+++.+|.
T Consensus 177 ~VdeS~LTGES~Pv~K~~g~---------------------------~v~~Gt~~~~g~--------------------- 208 (645)
T 3j08_A 177 YVDESMISGEPVPVLKSKGD---------------------------EVFGATINNTGV--------------------- 208 (645)
T ss_dssp EEECHHHHCCSSCEEECTTC---------------------------EECTTCEECSSC---------------------
T ss_pred EEEcccccCCCCceecCCCC---------------------------EeeccEEEecCc---------------------
Confidence 99999999999999998765 566676666655
Q ss_pred EEEEEEEecCcc---ceeeccCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccCCCCCccCC
Q 001335 270 IIGAVIFAGHET---KVMMNSMNIPSKRSTLERKLDKLILALFATLTVMCLICAIGSAIFIDKKHYYLGLHNMGNSVEDD 346 (1097)
Q Consensus 270 ~~gvVv~tG~~T---k~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~yl~~~~~~~~~~~~ 346 (1097)
+.+.|++||.+| ++.+...+++.+++++|+.+|++..+++++++++++++++.|.++.... |
T Consensus 209 ~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~~~~-~-------------- 273 (645)
T 3j08_A 209 LKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAP-L-------------- 273 (645)
T ss_dssp EEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCSCS-C--------------
T ss_pred EEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-H--------------
Confidence 999999999999 4556667888899999999999999999999888888876654332110 1
Q ss_pred CCCCChhHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHhhhhhhccCcccccccCCCCceeccCccccccccceEEEe
Q 001335 347 QFNPDKRFLVFVLNMFTLITLYSPIIPISLYVSIETIKFFQSTQYINKDLHMYHAESNTPASARTSNLNEELGQVEYIFS 426 (1097)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~i~l~~~~iP~sL~v~l~~~~~~~~~~~i~~d~~m~~~~~~~~~~~r~~~~~e~LG~v~~i~~ 426 (1097)
...+..++.+++.+|||+|+++++++...+ ..++ +++++++|+++.+|+||++|+|||
T Consensus 274 -----------~~~~~~~i~vlvia~P~aL~la~p~a~~~~-~~~~----------a~~gilvk~~~~lE~lg~v~~i~f 331 (645)
T 3j08_A 274 -----------LFAFTTLIAVLVVACPCAFGLATPTALTVG-MGKG----------AELGILIKNADALEVAEKVTAVIF 331 (645)
T ss_dssp -----------CCTTTTTHHHHHHHSCTTHHHHHHHHHHHH-HHHH----------HTTCCCCSSTTHHHHGGGCCEEEE
T ss_pred -----------HHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHH----------HHCCeEecCchHHHHhhCCCEEEE
Confidence 124566788999999999999999999988 7766 788999999999999999999999
Q ss_pred cCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCChHhhhcccCCCCChhHHHH
Q 001335 427 DKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDPRLLRGAWRNEHNPDACKE 506 (1097)
Q Consensus 427 DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 506 (1097)
|||||||+|+|+|.++...+.. ..+
T Consensus 332 DKTGTLT~~~~~v~~~~~~~~~-------------------------------------------------------~~~ 356 (645)
T 3j08_A 332 DKTGTLTKGKPEVTDLVPLNGD-------------------------------------------------------ERE 356 (645)
T ss_dssp EGGGTSSSSCCEEEEEEESSSC-------------------------------------------------------HHH
T ss_pred cCcccccCCCeEEEEEEeCCCC-------------------------------------------------------HHH
Confidence 9999999999999998765311 123
Q ss_pred HHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCC
Q 001335 507 FFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFN 586 (1097)
Q Consensus 507 ~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~ 586 (1097)
++...+.|+. .++||++.|+++++++.|+...... +|+
T Consensus 357 ~l~~aa~~e~--------------~s~hPla~Aiv~~a~~~g~~~~~~~----------------------------~~~ 394 (645)
T 3j08_A 357 LLRLAAIAER--------------RSEHPIAEAIVKKALEHGIELGEPE----------------------------KVE 394 (645)
T ss_dssp HHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCSCC----------------------------CCE
T ss_pred HHHHHHHHhh--------------cCCChhHHHHHHHHHhcCCCcCCcc----------------------------ceE
Confidence 4444444422 2579999999999999886532110 111
Q ss_pred CCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHH
Q 001335 587 STRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQA 666 (1097)
Q Consensus 587 s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a 666 (1097)
+...+ ++.. .. +.+|+++.+.+... ...+.+.+++++++.+|+|++++|+
T Consensus 395 ~~~g~-g~~~----~~---v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~l~va~------------------ 444 (645)
T 3j08_A 395 VIAGE-GVVA----DG---ILVGNKRLMEDFGV----AVSNEVELALEKLEREAKTAVIVAR------------------ 444 (645)
T ss_dssp EETTT-EEEE----TT---EEEECHHHHHHTTC----CCCHHHHHHHHHHHTTTCCCEEEEE------------------
T ss_pred EecCC-ceEE----EE---EEECCHHHHHhcCC----CccHHHHHHHHHHHhcCCeEEEEEE------------------
Confidence 11111 1111 22 34488876654222 2335667788899999999999996
Q ss_pred HhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEE
Q 001335 667 KSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQF 746 (1097)
Q Consensus 667 ~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i 746 (1097)
|++++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+..
T Consensus 445 --------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~------ 498 (645)
T 3j08_A 445 --------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------ 498 (645)
T ss_dssp --------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE------
T ss_pred --------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE------
Confidence 679999999999999999999999999999999999999999999999999831
Q ss_pred EEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccC
Q 001335 747 IITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNC 826 (1097)
Q Consensus 747 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~ 826 (1097)
T Consensus 499 -------------------------------------------------------------------------------- 498 (645)
T 3j08_A 499 -------------------------------------------------------------------------------- 498 (645)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEec-CccchhhhhhcceeccchHh--HHHHHH
Q 001335 827 SSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGIS-GQEGMQAVMASDFAIAQFRF--LTDLLL 903 (1097)
Q Consensus 827 ~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~-g~e~~~a~~~AD~vi~~~~~--l~~lll 903 (1097)
++++++|++|..+++.+++ . +.|+|+|||.||++|++.||+||+|+ |.+. ++++||+++.++++ +..+ +
T Consensus 499 ---~~~~~~P~~K~~~v~~l~~-~-~~v~~vGDg~ND~~al~~A~vgiamg~g~~~--a~~~AD~vl~~~~~~~i~~~-i 570 (645)
T 3j08_A 499 ---VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSDV--AVESGDIVLIRDDLRDVVAA-I 570 (645)
T ss_dssp ---EECSCCTTCHHHHHHHHTT-T-CCEEEEECSSSCHHHHHHSSEEEEECCCSCC--SSCCSSSEESSCCTTHHHHH-H
T ss_pred ---EEEeCCHHhHHHHHHHHhh-C-CeEEEEeCCHhHHHHHHhCCEEEEeCCCcHH--HHHhCCEEEecCCHHHHHHH-H
Confidence 8999999999999999998 4 89999999999999999999999994 4443 89999999976665 5565 7
Q ss_pred hhhhhhHHHHhHHHHHHHHHHHHHHHHH
Q 001335 904 VHGRWSYLRICKVVLYFFYKNLTFTLTQ 931 (1097)
Q Consensus 904 ~~Gr~~~~~i~~~i~~~~~~ni~~~~~~ 931 (1097)
.+||++++|+++++.|.+++|++.+...
T Consensus 571 ~~~r~~~~~i~~nl~~a~~~N~~~i~la 598 (645)
T 3j08_A 571 QLSRKTMSKIKQNIFWALIYNVILIPAA 598 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999998854443
No 9
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=99.83 E-value=2.5e-25 Score=243.68 Aligned_cols=137 Identities=22% Similarity=0.299 Sum_probs=115.2
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHH
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE 766 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 766 (1097)
+-.+.|.+.++|+++|+++++|+.|++.|++++|+|||+..++..+++.+|+..
T Consensus 124 ~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~-------------------------- 177 (263)
T 2yj3_A 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE-------------------------- 177 (263)
Confidence 446789999999999999999999999999999999999999999999988731
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHH
Q 001335 767 IARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLV 846 (1097)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~l 846 (1097)
+|..+.|+.|..+++.+
T Consensus 178 ---------------------------------------------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 178 ---------------------------------------------------------------YYSNLSPEDKVRIIEKL 194 (263)
Confidence 44555599999999998
Q ss_pred HcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceec--cchHhHHHHHHhhhhhhHHHHhH
Q 001335 847 KKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAI--AQFRFLTDLLLVHGRWSYLRICK 915 (1097)
Q Consensus 847 k~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi--~~~~~l~~lll~~Gr~~~~~i~~ 915 (1097)
+. .++.++|||||.||++|++.||+||++... ...+...||+++ .++.-+..+ +..+|.+++++++
T Consensus 195 ~~-~~~~~~~VGD~~~D~~aa~~Agv~va~g~~-~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~~ 262 (263)
T 2yj3_A 195 KQ-NGNKVLMIGDGVNDAAALALADVSVAMGNG-VDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIPS 262 (263)
Confidence 87 577899999999999999999999999432 223678899999 444446555 7889999988875
No 10
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=99.86 E-value=1.1e-20 Score=209.74 Aligned_cols=272 Identities=22% Similarity=0.274 Sum_probs=193.0
Q ss_pred CCCCceeccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCC
Q 001335 403 SNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKG 482 (1097)
Q Consensus 403 ~~~~~~~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (1097)
+++++++|+++.+|.|+++++|+||||||||.+.+.+..+...+. +
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~------~---------------------------- 59 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG------D---------------------------- 59 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS------C----------------------------
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC------C----------------------------
Confidence 789999999999999999999999999999999999988765421 0
Q ss_pred CCCCChHhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEE
Q 001335 483 FNFDDPRLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVR 562 (1097)
Q Consensus 483 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~ 562 (1097)
. .+++..+ ..+ + ..+.||.+.|+.+++++.|+..... .
T Consensus 60 ------------------~---~~~l~~~---~~~--e---------~~s~hp~~~a~~~~~~~~g~~~~~~--~----- 97 (287)
T 3a1c_A 60 ------------------E---RELLRLA---AIA--E---------RRSEHPIAEAIVKKALEHGIELGEP--E----- 97 (287)
T ss_dssp ------------------H---HHHHHHH---HHH--T---------TTCCSHHHHHHHHHHHHTTCCCCCC--S-----
T ss_pred ------------------H---HHHHHHH---HHH--h---------hcCCCHHHHHHHHHHHhcCCCcccc--c-----
Confidence 0 1122222 221 1 1257999999999999988642110 0
Q ss_pred eccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCe
Q 001335 563 ESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLR 642 (1097)
Q Consensus 563 ~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR 642 (1097)
.+.. +. .+ ++. . .. +.+|.++.+.+.... .++.+.+..+.+..+|.+
T Consensus 98 -------------~~~~---~~----G~--~~~--~--~~---~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~ 144 (287)
T 3a1c_A 98 -------------KVEV---IA----GE--GVV--A--DG---ILVGNKRLMEDFGVA----VSNEVELALEKLEREAKT 144 (287)
T ss_dssp -------------CEEE---ET----TT--EEE--E--TT---EEEECHHHHHHTTCC----CCHHHHHHHHHHHHTTCE
T ss_pred -------------ccee---ec----CC--CeE--E--EE---EEECCHHHHHhcCCC----ccHHHHHHHHHHHhCCCe
Confidence 0100 00 00 111 0 12 234665444321111 112345566788889999
Q ss_pred EEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEc
Q 001335 643 TLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLT 722 (1097)
Q Consensus 643 ~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlT 722 (1097)
++++++ |..++|.+..+++++|+++++|+.|+++|+++.++|
T Consensus 145 ~i~~~~--------------------------------------d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 145 AVIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp EEEEEE--------------------------------------TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEE--------------------------------------CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence 999996 457899999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEE
Q 001335 723 GDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALII 802 (1097)
Q Consensus 723 GD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi 802 (1097)
|+....+..+++.+|+..
T Consensus 187 ~~~~~~~~~~l~~~gl~~-------------------------------------------------------------- 204 (287)
T 3a1c_A 187 GDNWRSAEAISRELNLDL-------------------------------------------------------------- 204 (287)
T ss_dssp SSCHHHHHHHHHHHTCSE--------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHhCCce--------------------------------------------------------------
Confidence 999999999999988731
Q ss_pred cCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccch
Q 001335 803 DGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGM 882 (1097)
Q Consensus 803 ~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~ 882 (1097)
.|..+.|..|...++.+.. . ..+++|||+.||+.|.+.||++|++.+...
T Consensus 205 ---------------------------~f~~i~~~~K~~~~~~l~~-~-~~~~~vGDs~~Di~~a~~ag~~v~~~~~~~- 254 (287)
T 3a1c_A 205 ---------------------------VIAEVLPHQKSEEVKKLQA-K-EVVAFVGDGINDAPALAQADLGIAVGSGSD- 254 (287)
T ss_dssp ---------------------------EECSCCTTCHHHHHHHHTT-T-CCEEEEECTTTCHHHHHHSSEEEEECCCSC-
T ss_pred ---------------------------eeeecChHHHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHCCeeEEeCCCCH-
Confidence 3444558899999998887 4 889999999999999999999999943322
Q ss_pred hhhhhcceec--cchHhHHHHHHhhhhhhHHHHh
Q 001335 883 QAVMASDFAI--AQFRFLTDLLLVHGRWSYLRIC 914 (1097)
Q Consensus 883 ~a~~~AD~vi--~~~~~l~~lll~~Gr~~~~~i~ 914 (1097)
..+..||+++ .++.-+..+ +..+|.++++++
T Consensus 255 ~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i~ 287 (287)
T 3a1c_A 255 VAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKIK 287 (287)
T ss_dssp CSSCCSSEEESSSCTHHHHHH-HHTTC-------
T ss_pred HHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhhC
Confidence 2567899999 666666665 788999888764
No 11
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=99.83 E-value=1.6e-19 Score=199.51 Aligned_cols=274 Identities=22% Similarity=0.252 Sum_probs=185.5
Q ss_pred eccCccccccccceEEEecCCCceeecceEEEEEEEcceeccCCchhhhhhhhhhcCCCCCccccccccccCCCCCCCCh
Q 001335 409 ARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEIYGTGITEIERGVAQQTGMKIPEVERSVKAVHEKGFNFDDP 488 (1097)
Q Consensus 409 ~r~~~~~e~LG~v~~i~~DKTGTLT~n~m~~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (1097)
+|+++.+|.|++++.|+||++||||.|+|++..+...+.
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~----------------------------------------- 39 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH----------------------------------------- 39 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS-----------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC-----------------------------------------
Confidence 478899999999999999999999999999998764321
Q ss_pred HhhhcccCCCCChhHHHHHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccc
Q 001335 489 RLLRGAWRNEHNPDACKEFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEK 568 (1097)
Q Consensus 489 ~l~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~ 568 (1097)
...+++..++.+.. .+.+|...++.++++..|+....
T Consensus 40 --------------~~~~~~~~~~~~~~--------------~s~~~~~~a~~~~~~~~g~~~~~--------------- 76 (280)
T 3skx_A 40 --------------SEDELLQIAASLEA--------------RSEHPIAAAIVEEAEKRGFGLTE--------------- 76 (280)
T ss_dssp --------------CHHHHHHHHHHHHT--------------TCCSHHHHHHHHHHHHTTCCCCC---------------
T ss_pred --------------CHHHHHHHHHHhhc--------------cCCCHHHHHHHHHHHhcCCCCCC---------------
Confidence 01123333332211 13588999999999998864311
Q ss_pred cCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEE
Q 001335 569 MGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAY 648 (1097)
Q Consensus 569 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~ 648 (1097)
...+. .++ .+.+...+ ....+ ..|.++.+........ +....+...+.+.+.+++
T Consensus 77 -----~~~~~---~~~----g~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 131 (280)
T 3skx_A 77 -----VEEFR---AIP----GKGVEGIV--NGRRY---MVVSPGYIRELGIKTD--------ESVEKLKQQGKTVVFILK 131 (280)
T ss_dssp -----CEEEE---EET----TTEEEEEE--TTEEE---EEECHHHHHHTTCCCC--------TTHHHHHTTTCEEEEEEE
T ss_pred -----cccee---ecC----CCEEEEEE--CCEEE---EEecHHHHHHcCCCch--------HHHHHHHhCCCeEEEEEE
Confidence 11111 111 11122222 12222 2366665544322211 234566788888888775
Q ss_pred EecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 649 RDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 649 r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
+..++|.+.++|+++++++++++.|++.|+++.++||+....
T Consensus 132 --------------------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~ 173 (280)
T 3skx_A 132 --------------------------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFV 173 (280)
T ss_dssp --------------------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHH
T ss_pred --------------------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHH
Confidence 557899999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccch
Q 001335 729 AINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLM 808 (1097)
Q Consensus 729 a~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~ 808 (1097)
+..+++.+|+..
T Consensus 174 ~~~~~~~~gl~~-------------------------------------------------------------------- 185 (280)
T 3skx_A 174 AKWVAEELGLDD-------------------------------------------------------------------- 185 (280)
T ss_dssp HHHHHHHHTCSE--------------------------------------------------------------------
T ss_pred HHHHHHHcCChh--------------------------------------------------------------------
Confidence 999999998731
Q ss_pred hhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhc
Q 001335 809 YALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMAS 888 (1097)
Q Consensus 809 ~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~A 888 (1097)
.|..+.|.+|...++.+.+ .. .++||||+.||+.|++.||+||+|.+... .++..|
T Consensus 186 ---------------------~f~~~~~~~k~~~~k~~~~-~~-~~~~vGD~~nDi~~~~~Ag~~va~~~~~~-~~~~~a 241 (280)
T 3skx_A 186 ---------------------YFAEVLPHEKAEKVKEVQQ-KY-VTAMVGDGVNDAPALAQADVGIAIGAGTD-VAVETA 241 (280)
T ss_dssp ---------------------EECSCCGGGHHHHHHHHHT-TS-CEEEEECTTTTHHHHHHSSEEEECSCCSS-SCCCSS
T ss_pred ---------------------HhHhcCHHHHHHHHHHHHh-cC-CEEEEeCCchhHHHHHhCCceEEecCCcH-HHHhhC
Confidence 4555668899999998887 33 57999999999999999999999954332 277889
Q ss_pred ceec--cchHhHHHHHHhhhhhhHHHHhHHHHHHHH
Q 001335 889 DFAI--AQFRFLTDLLLVHGRWSYLRICKVVLYFFY 922 (1097)
Q Consensus 889 D~vi--~~~~~l~~lll~~Gr~~~~~i~~~i~~~~~ 922 (1097)
|+++ .+..-+..+ +..+|..++++++++.|.+.
T Consensus 242 ~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 242 DIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp SEECSSCCTHHHHHH-HHHHHTCCC-----------
T ss_pred CEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9998 445546665 67899999888888777653
No 12
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=99.82 E-value=6.4e-21 Score=177.26 Aligned_cols=99 Identities=17% Similarity=0.286 Sum_probs=90.1
Q ss_pred chhhhcCceEEEeeCCeEEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeecccccccC
Q 001335 134 NDMTINSTPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALERTWD 213 (1097)
Q Consensus 134 ~~~~~n~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~~~~~~ 213 (1097)
+...+.+++++|+|+|+++++++++|+|||+|.|++||.+|||++|++++ +.||||+|||||.|+.|.+.+
T Consensus 5 ~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-----~~vdeS~LTGEs~pv~k~~g~---- 75 (113)
T 2hc8_A 5 KLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-----SYVDESMISGEPVPVLKSKGD---- 75 (113)
T ss_dssp HHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-----EEEECHHHHCCSSCEEECTTC----
T ss_pred HHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-----EEEEccccCCCCccEEECCCC----
Confidence 34556789999999999999999999999999999999999999999986 899999999999999998875
Q ss_pred CCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee
Q 001335 214 YLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM 285 (1097)
Q Consensus 214 ~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~ 285 (1097)
.+|+|+++.+|. +.+.|++||.+|.+.+
T Consensus 76 -----------------------~v~aGt~~~~G~---------------------~~~~V~~~g~~T~~~~ 103 (113)
T 2hc8_A 76 -----------------------EVFGATINNTGV---------------------LKIRATRVGGETLLAQ 103 (113)
T ss_dssp -----------------------EECTTCEECSSC---------------------EEEEEEECGGGSHHHH
T ss_pred -----------------------EEEeCCEEeece---------------------EEEEEEEecCcCHHHH
Confidence 678888888887 9999999999997643
No 13
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=99.75 E-value=4.4e-19 Score=167.96 Aligned_cols=98 Identities=16% Similarity=0.240 Sum_probs=87.4
Q ss_pred hhhhcCceEEEeeCCe------EEEEecccCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCcccceeeccc
Q 001335 135 DMTINSTPVEVLQGQR------WVSIPWRKLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKAL 208 (1097)
Q Consensus 135 ~~~~n~~~~~V~r~g~------~~~i~~~~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGEs~~~~K~~~ 208 (1097)
...+.+.+++|+|+|. +++++.++|+|||+|.|++||.||||++|++++ +.||||+|||||.|+.|.+.
T Consensus 12 L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~-----~~vdeS~LTGEs~pv~k~~g 86 (124)
T 2kij_A 12 LISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGH-----SMVDESLITGEAMPVAKKPG 86 (124)
T ss_dssp HHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCC-----CEEECTTTTCCSSCEECCTT
T ss_pred HhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEcc-----EEEEeccccCCCccEEeCCC
Confidence 4456789999999764 789999999999999999999999999999987 58999999999999999886
Q ss_pred ccccCCCChhhhccceEEEEEecCCCCceeeEEEEEEcCccccCCCCCeeecccEEecCCeEEEEEEEecCccceee
Q 001335 209 ERTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNLIMQKQTLPLNPNQILLRGCSLRNTEYIIGAVIFAGHETKVMM 285 (1097)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~i~~e~p~~~~~~f~Gt~~~~g~~~~l~~~n~llrGs~l~nt~~~~gvVv~tG~~Tk~~~ 285 (1097)
+ .+|+|+++.+|. +.+.|+.||.+|.+.+
T Consensus 87 ~---------------------------~v~aGt~~~~G~---------------------~~~~v~~~g~~T~~~~ 115 (124)
T 2kij_A 87 S---------------------------TVIAGSINQNGS---------------------LLICATHVGADTTLSQ 115 (124)
T ss_dssp E---------------------------EECTTCEEESSC---------------------CEEEECSCTTTCHHHH
T ss_pred C---------------------------EEEcCCEEeeeE---------------------EEEEEEEecccCHHHH
Confidence 5 778888888887 9999999999997643
No 14
>3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli}
Probab=99.70 E-value=1.5e-18 Score=174.71 Aligned_cols=140 Identities=18% Similarity=0.187 Sum_probs=107.1
Q ss_pred HHHHHhhcccceEeccCCCCCceEEecCChhHHHHHHHHHHCCcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecC
Q 001335 506 EFFRCLAICHTVLPEGDESPERITYQAASPDEAALVTAAKNFGFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEF 585 (1097)
Q Consensus 506 ~~~~~lalc~~~~~~~~~~~~~~~y~~~sp~e~al~~~a~~~g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F 585 (1097)
+.++..++|..... ..++|+|.|+++++...+..- ....|+++..+||
T Consensus 17 ~vl~~a~L~s~~~~-----------~~~n~~d~Ail~~~~~~~~~~---------------------~~~~~~~~~eiPF 64 (170)
T 3gwi_A 17 RVLHSAWLNSHYQT-----------GLKNLLDTAVLEGTDEESARS---------------------LASRWQKIDEIPF 64 (170)
T ss_dssp HHHHHHHHHHHHCC-----------SCCCHHHHHHHHTSCHHHHHH---------------------HHHHSEEEEEECC
T ss_pred HHHHHHHHcCCCCC-----------CCCChHHHHHHHHHHhcChhh---------------------hhhcCeEEeeEec
Confidence 45566666654321 136999999999875432100 1345888999999
Q ss_pred CCCCceEEEEEEecCCcEEEEEecchhHHHHHhhc---------CchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHH
Q 001335 586 NSTRKRQSVVCRYADGRLVLYCKGADSVIYERLAN---------GNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMY 656 (1097)
Q Consensus 586 ~s~rkrmsviv~~~~~~~~l~~KGa~~~i~~~~~~---------~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~ 656 (1097)
+|+|||||++++.++|++++++|||||.|+++|+. .+.+.++.+.+.+++|+.+|+|||++|||+++..+.
T Consensus 65 ds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~ 144 (170)
T 3gwi_A 65 DFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREG 144 (170)
T ss_dssp CTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSS
T ss_pred CcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCcc
Confidence 99999999999987888999999999999999974 234567789999999999999999999999875421
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccc
Q 001335 657 ERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDK 699 (1097)
Q Consensus 657 ~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~ 699 (1097)
. .....|+||+|+|++|+-|.
T Consensus 145 ~----------------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 145 D----------------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp C----------------------CCGGGSCSEEEEEEEEEEC-
T ss_pred c----------------------cCccccCCcEEEehhccccc
Confidence 0 01235899999999999875
No 15
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=99.43 E-value=6.3e-14 Score=156.11 Aligned_cols=140 Identities=13% Similarity=0.114 Sum_probs=101.3
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
.++++|+++++++.|+++|+++.|+|||...++.++++++|+...+...+......
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~------------------------ 194 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDF------------------------ 194 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEE------------------------
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEE------------------------
Confidence 57999999999999999999999999999999999999999976543222110000
Q ss_pred HHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEE
Q 001335 777 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vla 856 (1097)
........+.+... ..+++..|.+|...+..+++ .++.|+|
T Consensus 195 -----------------~~~~~~~~~~~~~i---------------------~~~~k~~~~~k~~~~~~~~~-~~~~v~~ 235 (297)
T 4fe3_A 195 -----------------DENGVLKGFKGELI---------------------HVFNKHDGALKNTDYFSQLK-DNSNIIL 235 (297)
T ss_dssp -----------------CTTSBEEEECSSCC---------------------CTTCHHHHHHTCHHHHHHTT-TCCEEEE
T ss_pred -----------------cccceeEecccccc---------------------chhhcccHHHHHHHHHHhhc-cCCEEEE
Confidence 00011111122111 14566678888888877877 6788999
Q ss_pred ecCCCCChhhhh---hcCeeEEec--C----ccchhhhhhcceeccchHhHH
Q 001335 857 IGDGANDVSMIQ---AAHIGVGIS--G----QEGMQAVMASDFAIAQFRFLT 899 (1097)
Q Consensus 857 iGDG~ND~~ml~---~AdvGIam~--g----~e~~~a~~~AD~vi~~~~~l~ 899 (1097)
+|||+||++|++ .||+||+|+ + +....++++||+||.++++..
T Consensus 236 vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~ 287 (297)
T 4fe3_A 236 LGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLE 287 (297)
T ss_dssp EESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCH
T ss_pred EeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChH
Confidence 999999999955 999999984 1 122236899999999988843
No 16
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=99.05 E-value=3.7e-10 Score=116.47 Aligned_cols=137 Identities=14% Similarity=0.101 Sum_probs=102.7
Q ss_pred eEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHH
Q 001335 689 TLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIA 768 (1097)
Q Consensus 689 ~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 768 (1097)
..++...++|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 42 ~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------- 87 (189)
T 3mn1_A 42 SEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------- 87 (189)
T ss_dssp CEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE----------------------------
T ss_pred cEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH----------------------------
Confidence 345555555544 9999999999999999999999999999999832
Q ss_pred HHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHc
Q 001335 769 RFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKK 848 (1097)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~ 848 (1097)
+|.. +..|...++.+.+
T Consensus 88 -------------------------------------------------------------~f~~--~~~K~~~~~~~~~ 104 (189)
T 3mn1_A 88 -------------------------------------------------------------LFQG--REDKLVVLDKLLA 104 (189)
T ss_dssp -------------------------------------------------------------EECS--CSCHHHHHHHHHH
T ss_pred -------------------------------------------------------------HhcC--cCChHHHHHHHHH
Confidence 1111 1556666666554
Q ss_pred c---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHHHHhhhhhhHHHHhHHHHH
Q 001335 849 G---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDLLLVHGRWSYLRICKVVLY 919 (1097)
Q Consensus 849 ~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~lll~~Gr~~~~~i~~~i~~ 919 (1097)
. ..+.++++||+.||++|++.|++|+++.+... .++..||+++.+ .+.+..+ +...|..++++.+.+.|
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~ 182 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVANAAS-FVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLE 182 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTST
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhc
Confidence 3 24679999999999999999999999954332 378899999987 3445555 55678899999999988
Q ss_pred HHHHH
Q 001335 920 FFYKN 924 (1097)
Q Consensus 920 ~~~~n 924 (1097)
.+.+|
T Consensus 183 ~~~~~ 187 (189)
T 3mn1_A 183 GHHHH 187 (189)
T ss_dssp TC---
T ss_pred ccccc
Confidence 87665
No 17
>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0
Probab=98.96 E-value=9.2e-10 Score=121.80 Aligned_cols=81 Identities=19% Similarity=0.269 Sum_probs=57.0
Q ss_pred EeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH------hHHHH
Q 001335 833 RVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR------FLTDL 901 (1097)
Q Consensus 833 r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~------~l~~l 901 (1097)
...|. .|+..++.+.+.. ...|++|||+.||++|++.|++||+|.++... ++..||+++.+.+ .+.++
T Consensus 195 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~s~~edGv~~~i~~~ 273 (290)
T 3dnp_A 195 NIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNAVPE-IKRKADWVTRSNDEQGVAYMMKEY 273 (290)
T ss_dssp EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHSSEECCCTTTTHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCCcHH-HHHhcCEECCCCCccHHHHHHHHH
Confidence 44553 4998888887653 35699999999999999999999999655443 8999999987533 25666
Q ss_pred HHhhhhhhHHHHh
Q 001335 902 LLVHGRWSYLRIC 914 (1097)
Q Consensus 902 ll~~Gr~~~~~i~ 914 (1097)
+...+++-|.+-.
T Consensus 274 ~~~~~~~~~~~~~ 286 (290)
T 3dnp_A 274 FRMQQRKGFLDKF 286 (290)
T ss_dssp HHHHHHC------
T ss_pred HHhcCcccHHhHh
Confidence 6666666665443
No 18
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=98.94 E-value=6.8e-10 Score=122.11 Aligned_cols=78 Identities=27% Similarity=0.398 Sum_probs=54.6
Q ss_pred EEEeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH------hHH
Q 001335 831 CCRVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR------FLT 899 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~------~l~ 899 (1097)
+.+..|. .|...++.+.+.. ...|++|||+.||++|++.|++||+|+++.. .++.+||+++.+.+ .+.
T Consensus 188 ~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~e~Gv~~~i~ 266 (279)
T 4dw8_A 188 FLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGNAQE-PVKKAADYITLTNDEDGVAEAIE 266 (279)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCCCcH-HHHHhCCEEcCCCCCcHHHHHHH
Confidence 3456666 5898888877643 3569999999999999999999999955443 38899999987633 266
Q ss_pred HHHHhhhhhh
Q 001335 900 DLLLVHGRWS 909 (1097)
Q Consensus 900 ~lll~~Gr~~ 909 (1097)
+++..+|+..
T Consensus 267 ~~~~~~~~~~ 276 (279)
T 4dw8_A 267 RIFNVEGHHH 276 (279)
T ss_dssp HHC-------
T ss_pred HHHhcccccc
Confidence 6667777653
No 19
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=98.89 E-value=2.4e-09 Score=117.98 Aligned_cols=190 Identities=15% Similarity=0.128 Sum_probs=106.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcc-----cCCChHHHHHHhHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVE-----ERGDPVEIARFMRE 773 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~-----~~~~~~~~~~~~~~ 773 (1097)
.+-+.+.++|++++++|++++++|||....+..+...+++. ...++.++..+.... ...+.....+.+ +
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~-----~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~-~ 112 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK-----LLYITDGGTVVRTPKEILKTYPMDEDIWKGMC-R 112 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGG-----CEEEETTTTEEECSSCEEEECCCCHHHHHHHH-H
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----cEEEECCCcEEEECCEEEEEecCCHHHHHHHH-H
Confidence 57788999999999999999999999999999998887752 235555655443210 011111111111 1
Q ss_pred HHHHH----------------------HHHHHHh-hhhcc------c-cc-CCCeEEEEE-cCccchhhcChhHHHHHHh
Q 001335 774 EVKRE----------------------LNKCIDE-AQQYI------H-SI-SGEKLALII-DGKCLMYALDPSLRVILLN 821 (1097)
Q Consensus 774 ~~~~~----------------------~~~~~~~-~~~~~------~-~~-~~~~~~lvi-~G~~l~~~l~~~l~~~f~~ 821 (1097)
...+. ....... ..... . .. .......+. +...... +.+.+.+.+..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~-~~~~l~~~~~~ 191 (283)
T 3dao_A 113 MVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEEL-CTPVFIPAWNK 191 (283)
T ss_dssp HHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHH-HTTTHHHHHTT
T ss_pred HHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHH-HHHHHHHHhcC
Confidence 11100 0000000 00000 0 00 011111122 2222211 12234344432
Q ss_pred -hhccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 822 -LSLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 822 -l~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
+........+.+..|.. |+..++.+.+..| ..|++|||+.||++|++.|++||+|+++... +|..||++..+.
T Consensus 192 ~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~na~~~-~k~~A~~v~~s~ 270 (283)
T 3dao_A 192 KAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVSNARQE-VIAAAKHTCAPY 270 (283)
T ss_dssp TEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEETTSCHH-HHHHSSEEECCG
T ss_pred CEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcCCCCHH-HHHhcCeECCCC
Confidence 11111122344566654 9999888876533 5699999999999999999999999655443 899999998754
Q ss_pred H
Q 001335 896 R 896 (1097)
Q Consensus 896 ~ 896 (1097)
+
T Consensus 271 ~ 271 (283)
T 3dao_A 271 W 271 (283)
T ss_dssp G
T ss_pred C
Confidence 3
No 20
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=98.87 E-value=1.5e-09 Score=119.24 Aligned_cols=204 Identities=15% Similarity=0.124 Sum_probs=99.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+.+.++|++++++|++++++||+....+..+...+|+..+. ...++.++. +....... ......+..+...+
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~--~~~i~~nGa-i~~~~~~~--~~~~~~~~~~~~~~ 96 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDD--QYAITFNGS-VAQTISGK--VLTNHSLTYEDYID 96 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSS--CEEEEGGGT-EEEETTSC--EEEECCCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--CEEEEcCcE-EEECCCCC--EEEecCCCHHHHHH
Confidence 46778899999999999999999999999999999999985432 234555554 22110000 00000011111111
Q ss_pred HHHHHHhhhhccccc-------------------------------------CCCeEEEEEcCcc-chhhcChhHHHHHH
Q 001335 779 LNKCIDEAQQYIHSI-------------------------------------SGEKLALIIDGKC-LMYALDPSLRVILL 820 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~-------------------------------------~~~~~~lvi~G~~-l~~~l~~~l~~~f~ 820 (1097)
+.+...+........ ......+.+.+.. ....+.+.+.+.+.
T Consensus 97 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~ 176 (279)
T 3mpo_A 97 LEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFK 176 (279)
T ss_dssp HHHHHHHTTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHH
T ss_pred HHHHHHHcCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 111111110000000 0000011111110 00000011111111
Q ss_pred h-hhccCCceEEEEeCccc--HHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 821 N-LSLNCSSVVCCRVSPLQ--KAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 821 ~-l~~~~~~vi~~r~sP~q--K~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
. +........+.+..|.. |...++.+.+..| ..+++|||+.||++|++.|++||+|+++... +|.+||++..+
T Consensus 177 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~~-~k~~A~~v~~~ 255 (279)
T 3mpo_A 177 DRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNAIDE-VKEAAQAVTLT 255 (279)
T ss_dssp HHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC---CCH-HHHHCSCBC--
T ss_pred CCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCCCHH-HHHhcceeccC
Confidence 1 22222223345666654 9998888776533 5699999999999999999999999554433 89999999865
Q ss_pred hHh------HHHHHHhhhhh
Q 001335 895 FRF------LTDLLLVHGRW 908 (1097)
Q Consensus 895 ~~~------l~~lll~~Gr~ 908 (1097)
.+- +.++++-+|+.
T Consensus 256 ~~e~Gv~~~i~~~~~~~~~~ 275 (279)
T 3mpo_A 256 NAENGVAAAIRKYALNEGHH 275 (279)
T ss_dssp ----CHHHHHC---------
T ss_pred CCccHHHHHHHHHhcccCcc
Confidence 332 55555666654
No 21
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=98.85 E-value=4.4e-09 Score=111.74 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=102.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHH-HHHHhHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVE-IARFMREEV 775 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 775 (1097)
..++.+++.++|++|+++|++++++|||....+..+++++|+.. ..++.++..+.+.. +. .. ....+ +.
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~-----~~I~~NGa~i~~~~--~~-~i~~~~~l--~~ 89 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING-----PVFGENGGIMFDND--GS-IKKFFSNE--GT 89 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS-----CEEEGGGTEEECTT--SC-EEESSCSH--HH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCC-----eEEEeCCcEEEeCC--CC-EEEEeccH--HH
Confidence 34678899999999999999999999999999999999998742 14555555443210 00 00 00111 11
Q ss_pred HHHHHHHHHhhhh----cccccCCCeEEEEEcCccchhhcChhHHHHHHh---hhccCCceEEEEeCc--ccHHHHHHHH
Q 001335 776 KRELNKCIDEAQQ----YIHSISGEKLALIIDGKCLMYALDPSLRVILLN---LSLNCSSVVCCRVSP--LQKAQVTSLV 846 (1097)
Q Consensus 776 ~~~~~~~~~~~~~----~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~---l~~~~~~vi~~r~sP--~qK~~iv~~l 846 (1097)
..++ +...+.-. +........+.. + +. ..+.+..+.+.. +... ...-+.++.| ..|...++.+
T Consensus 90 ~~~i-~~~~~~~~~~~~~~~~~~~~~~~~-~----~~-~~~~~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~l~~l 161 (227)
T 1l6r_A 90 NKFL-EEMSKRTSMRSILTNRWREASTGF-D----ID-PEDVDYVRKEAESRGFVIF-YSGYSWHLMNRGEDKAFAVNKL 161 (227)
T ss_dssp HHHH-HHHTTTSSCBCCGGGGGCSSSEEE-B----CC-GGGHHHHHHHHHTTTEEEE-EETTEEEEEETTCSHHHHHHHH
T ss_pred HHHH-HHHHHHhcCCccccccceecccce-E----Ee-cCCHHHHHHHHHhcCEEEE-ecCcEEEEecCCCCHHHHHHHH
Confidence 1222 11111000 000000000000 0 00 001111111111 1111 1112345567 5699998888
Q ss_pred Hccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 847 KKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 847 k~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
.+.. ...++++||+.||++|++.|++||+|.+... .++..||+++.+.
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n~~~-~~k~~a~~v~~~~ 212 (227)
T 1l6r_A 162 KEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD-NIKAVSDFVSDYS 212 (227)
T ss_dssp HHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCH-HHHHHCSEECSCC
T ss_pred HHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecCchH-HHHHhCCEEecCC
Confidence 7642 3579999999999999999999999954433 3788999998764
No 22
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=98.82 E-value=2.2e-09 Score=118.50 Aligned_cols=184 Identities=15% Similarity=0.170 Sum_probs=101.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
..+-+.+.++|++++++|++++++|||....+..+.+.+|+- ...+..++..+.+.... ......+..+...
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~-----~~~I~~nGa~i~~~~~~---~l~~~~l~~~~~~ 108 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR-----SYMITSNGARVHDSDGQ---QIFAHNLDRDIAA 108 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC-----CEEEEGGGTEEECTTSC---EEEECCCCHHHHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC-----ccEEEcCCeEEECCCCC---EEEecCCCHHHHH
Confidence 357778999999999999999999999999999999999874 24555555544321100 0000011111111
Q ss_pred HHHH-HHHhhhhccccc----------------------------------CCCe-EEEEEcCcc-chhhcChhHHHHHH
Q 001335 778 ELNK-CIDEAQQYIHSI----------------------------------SGEK-LALIIDGKC-LMYALDPSLRVILL 820 (1097)
Q Consensus 778 ~~~~-~~~~~~~~~~~~----------------------------------~~~~-~~lvi~G~~-l~~~l~~~l~~~f~ 820 (1097)
++.+ ............ ...- ..++.++.. ....+.+.+.+.+.
T Consensus 109 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~ 188 (285)
T 3pgv_A 109 DLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWG 188 (285)
T ss_dssp HHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 1111 000000000000 0000 111111110 00001112222222
Q ss_pred h-hhccCCceEEEEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcce
Q 001335 821 N-LSLNCSSVVCCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDF 890 (1097)
Q Consensus 821 ~-l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~ 890 (1097)
. +........+.++.|. .|+..++.+.+..| +.+++|||+.||++|++.|++||+|+++... +|.+||+
T Consensus 189 ~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na~~~-vk~~A~~ 263 (285)
T 3pgv_A 189 DRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQR-LKDLHPE 263 (285)
T ss_dssp GGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHHCTT
T ss_pred CCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCCCHH-HHHhCCC
Confidence 1 1111122234556664 49998888876533 5799999999999999999999999655443 8899985
No 23
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=98.81 E-value=1.3e-08 Score=103.90 Aligned_cols=129 Identities=16% Similarity=0.098 Sum_probs=91.6
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHH
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKREL 779 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1097)
+.+++.++|+.|+++|++++++||+....+..+++.+|+..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------------------------------------- 76 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------- 76 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------------------
Confidence 44567799999999999999999999999999999998832
Q ss_pred HHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHccc---CceEEE
Q 001335 780 NKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGA---RKITLS 856 (1097)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~---~~~vla 856 (1097)
.+.. ...|...++.+.+.. .+.+++
T Consensus 77 --------------------------------------------------~~~~--~k~k~~~~~~~~~~~~~~~~~~~~ 104 (180)
T 1k1e_A 77 --------------------------------------------------FFLG--KLEKETACFDLMKQAGVTAEQTAY 104 (180)
T ss_dssp --------------------------------------------------EEES--CSCHHHHHHHHHHHHTCCGGGEEE
T ss_pred --------------------------------------------------eecC--CCCcHHHHHHHHHHcCCCHHHEEE
Confidence 1100 134555555444322 367999
Q ss_pred ecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH------hHHHHHHhhhhhhHHHHhHHHHHHH
Q 001335 857 IGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR------FLTDLLLVHGRWSYLRICKVVLYFF 921 (1097)
Q Consensus 857 iGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~------~l~~lll~~Gr~~~~~i~~~i~~~~ 921 (1097)
|||+.||++|++.|++++++.+... .++..||+++.+.. .+.+. +...|..++++...+.|.+
T Consensus 105 vGD~~~Di~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~~~~~-~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 105 IGDDSVDLPAFAACGTSFAVADAPI-YVKNAVDHVLSTHGGKGAFREMSDM-ILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp EECSGGGHHHHHHSSEEEECTTSCH-HHHTTSSEECSSCTTTTHHHHHHHH-HHHHTTCTHHHHCHHHHHH
T ss_pred ECCCHHHHHHHHHcCCeEEeCCccH-HHHhhCCEEecCCCCCcHHHHHHHH-HHHhcCchhhhhhccchhh
Confidence 9999999999999999999954332 36788999988742 22222 2334555666665555543
No 24
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=98.76 E-value=9.9e-09 Score=116.05 Aligned_cols=150 Identities=19% Similarity=0.182 Sum_probs=94.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|+++|+++.|+||+....+..+++.+|+...-...+.+. ++
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~-d~-------------------------- 230 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIV-SG-------------------------- 230 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-TT--------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEee-CC--------------------------
Confidence 689999999999999999999999999999999999999843111111110 00
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEE-eCcccHHHHHHHHHcc---cCceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
.++|. +... ..++.|...++.+.+. ....+
T Consensus 231 ----------------------~~tg~------------------------~~~~~~~~kpk~~~~~~~~~~lgi~~~~~ 264 (335)
T 3n28_A 231 ----------------------KLTGQ------------------------VLGEVVSAQTKADILLTLAQQYDVEIHNT 264 (335)
T ss_dssp ----------------------EEEEE------------------------EESCCCCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ----------------------eeeee------------------------ecccccChhhhHHHHHHHHHHcCCChhhE
Confidence 00000 0000 1133455555544432 34679
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh--HHHHHHhhhhhhHHHHhHHHHHHHHHH
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF--LTDLLLVHGRWSYLRICKVVLYFFYKN 924 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~--l~~lll~~Gr~~~~~i~~~i~~~~~~n 924 (1097)
+|+|||.||++|++.||+||+|.+.+. ++..||+++...++ +..+ +......-.|++.++.+.+.+|
T Consensus 265 v~vGDs~nDi~~a~~aG~~va~~~~~~--~~~~a~~v~~~~~l~~v~~~-L~~~l~~~~r~~~~~~~~~~~~ 333 (335)
T 3n28_A 265 VAVGDGANDLVMMAAAGLGVAYHAKPK--VEAKAQTAVRFAGLGGVVCI-LSAALVAQQKLSWKSKEGHHHH 333 (335)
T ss_dssp EEEECSGGGHHHHHHSSEEEEESCCHH--HHTTSSEEESSSCTHHHHHH-HHHHHHHTTCCCCC--------
T ss_pred EEEeCCHHHHHHHHHCCCeEEeCCCHH--HHhhCCEEEecCCHHHHHHH-HHhHHHHhhhhccccccccccc
Confidence 999999999999999999999944444 78899999865444 2222 3333344457777777776655
No 25
>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15
Probab=98.75 E-value=1.3e-08 Score=109.02 Aligned_cols=178 Identities=10% Similarity=0.011 Sum_probs=100.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChH---HHHHHhHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPV---EIARFMREEV 775 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 775 (1097)
.+.+.+.++|++|+++| +++++|||....+..+...+ ...++.++..+.. ....... .....+..+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l--------~~~I~~nGa~i~~-~~~~~~~~~~~~~~~l~~~~ 92 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD--------INMICYHGACSKI-NGQIVYNNGSDRFLGVFDRI 92 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS--------CEEEEGGGTEEEE-TTEEEECTTGGGGHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc--------hheEEECCEEEee-CCeeeecccccccchhhHHH
Confidence 46678999999999999 99999999999998887654 1355666665543 1100000 1222333333
Q ss_pred HHHHHHHHHhhhhcccccCCCeEEEEEcC-ccchhhcChhHHHHHHh---hhccCCceEEEEeCcc--cHHHHHHHHHcc
Q 001335 776 KRELNKCIDEAQQYIHSISGEKLALIIDG-KCLMYALDPSLRVILLN---LSLNCSSVVCCRVSPL--QKAQVTSLVKKG 849 (1097)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~lvi~G-~~l~~~l~~~l~~~f~~---l~~~~~~vi~~r~sP~--qK~~iv~~lk~~ 849 (1097)
..++..................+...... ..+..-..+.+.+.+.. +.. ....-+.++.|. .|+..++.+.+.
T Consensus 93 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~lei~~~~~~Kg~al~~l~~~ 171 (239)
T 1u02_A 93 YEDTRSWVSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVET-YYGKMIIELRVPGVNKGSAIRSVRGE 171 (239)
T ss_dssp HHHHTTHHHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEE-EECSSEEEEECTTCCHHHHHHHHHTT
T ss_pred HHHHHHHHhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEE-EeCCcEEEEEcCCCCHHHHHHHHHhh
Confidence 33333322222110000001111111000 00000000011111111 111 111234566676 599999999886
Q ss_pred cCceEEEecCCCCChhhhhhc--CeeEEecCccchhhhhhcceeccc
Q 001335 850 ARKITLSIGDGANDVSMIQAA--HIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~A--dvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.+ |+++||+.||++||+.| ++||+|.++ +..||+++.+
T Consensus 172 ~g--via~GD~~ND~~Ml~~a~~g~~vam~Na-----~~~A~~v~~~ 211 (239)
T 1u02_A 172 RP--AIIAGDDATDEAAFEANDDALTIKVGEG-----ETHAKFHVAD 211 (239)
T ss_dssp SC--EEEEESSHHHHHHHHTTTTSEEEEESSS-----CCCCSEEESS
T ss_pred CC--eEEEeCCCccHHHHHHhhCCcEEEECCC-----CCcceEEeCC
Confidence 66 99999999999999999 999999664 5689998866
No 26
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=98.73 E-value=2.6e-08 Score=104.13 Aligned_cols=108 Identities=12% Similarity=0.118 Sum_probs=83.1
Q ss_pred EEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHH
Q 001335 690 LIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIAR 769 (1097)
Q Consensus 690 llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 769 (1097)
.+....+.|.+ +|+.|+++|+++.|+||+....+..+++.+|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 34445555554 9999999999999999999999999999999832
Q ss_pred HhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc
Q 001335 770 FMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 849 (1097)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~ 849 (1097)
++... +.|...++.+.+.
T Consensus 118 ------------------------------------------------------------~f~~~--k~K~~~l~~~~~~ 135 (211)
T 3ij5_A 118 ------------------------------------------------------------LYQGQ--SDKLVAYHELLAT 135 (211)
T ss_dssp ------------------------------------------------------------EECSC--SSHHHHHHHHHHH
T ss_pred ------------------------------------------------------------hhccc--CChHHHHHHHHHH
Confidence 11111 4566666666543
Q ss_pred ---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 850 ---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 850 ---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
....++++||+.||++|++.|++++++.+... .++..||+++.+.
T Consensus 136 lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~~~~~-~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 136 LQCQPEQVAYIGDDLIDWPVMAQVGLSVAVADAHP-LLLPKAHYVTRIK 183 (211)
T ss_dssp HTCCGGGEEEEECSGGGHHHHTTSSEEEECTTSCT-TTGGGSSEECSSC
T ss_pred cCcCcceEEEEcCCHHHHHHHHHCCCEEEeCCccH-HHHhhCCEEEeCC
Confidence 24679999999999999999999999954433 2788999998764
No 27
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=98.72 E-value=2.8e-08 Score=99.74 Aligned_cols=107 Identities=15% Similarity=0.122 Sum_probs=80.7
Q ss_pred CceEEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH--HcCCccCCCeEEEEecCCccchhcccCCCh
Q 001335 687 DLTLIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY--ACNLINNEMKQFIITSETNAIRDVEERGDP 764 (1097)
Q Consensus 687 ~l~llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~--~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~ 764 (1097)
+-..++.+.++|.. +|+.|+++|+++.|+||+ ..+..+++ .+|+.
T Consensus 30 ~g~~~~~f~~~D~~------~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------- 76 (168)
T 3ewi_A 30 DQKEIISYDVKDAI------GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------- 76 (168)
T ss_dssp SCCCEEEEEHHHHH------HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-------------------------
T ss_pred CCCEEEEEecCcHH------HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-------------------------
Confidence 34567777777773 899999999999999999 67777887 44441
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHH
Q 001335 765 VEIARFMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTS 844 (1097)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~ 844 (1097)
++ ..++.|...++
T Consensus 77 -----------------------------------------------------------------~~--~g~~~K~~~l~ 89 (168)
T 3ewi_A 77 -----------------------------------------------------------------TE--VSVSDKLATVD 89 (168)
T ss_dssp -----------------------------------------------------------------EE--CSCSCHHHHHH
T ss_pred -----------------------------------------------------------------EE--ECCCChHHHHH
Confidence 00 11345777766
Q ss_pred HHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 845 LVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 845 ~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.+.+. ....++++||+.||++|++.|+++++|.+... .++..||+++..
T Consensus 90 ~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~na~~-~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 90 EWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACS-GAQKAVGYICKC 141 (168)
T ss_dssp HHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECTTCCH-HHHTTCSEECSS
T ss_pred HHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeCChhH-HHHHhCCEEeCC
Confidence 66543 23679999999999999999999999954433 389999999875
No 28
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=98.72 E-value=1.2e-08 Score=105.35 Aligned_cols=97 Identities=19% Similarity=0.159 Sum_probs=75.8
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhh
Q 001335 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 786 (1097)
Q Consensus 707 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1097)
.|+.|+++|+++.|+||+....+..+++++|+..
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------------------------- 93 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------------------------- 93 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE----------------------------------------------
Confidence 4999999999999999999999999999999842
Q ss_pred hhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCCC
Q 001335 787 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAND 863 (1097)
Q Consensus 787 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND 863 (1097)
++... +.|...++.+.+. ....+++|||+.||
T Consensus 94 -------------------------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nD 128 (195)
T 3n07_A 94 -------------------------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLID 128 (195)
T ss_dssp -------------------------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGG
T ss_pred -------------------------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHH
Confidence 11111 4455555555432 34679999999999
Q ss_pred hhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 864 ~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
++|++.|+++++|.+... .++..||+++...
T Consensus 129 i~~~~~ag~~va~~na~~-~~~~~ad~v~~~~ 159 (195)
T 3n07_A 129 WPVMEKVALRVCVADGHP-LLAQRANYVTHIK 159 (195)
T ss_dssp HHHHTTSSEEEECTTSCH-HHHHHCSEECSSC
T ss_pred HHHHHHCCCEEEECChHH-HHHHhCCEEEcCC
Confidence 999999999999955433 3789999998763
No 29
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=98.70 E-value=4.7e-08 Score=99.31 Aligned_cols=116 Identities=15% Similarity=0.116 Sum_probs=85.9
Q ss_pred EEEEeeeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHH
Q 001335 690 LIGCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIAR 769 (1097)
Q Consensus 690 llG~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 769 (1097)
.+....+.|.+ +|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 36 ~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------------------------ 79 (176)
T 3mmz_A 36 EFVSVHRGDGL------GIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------------------------ 79 (176)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC------------------------------
T ss_pred HhHhcccccHH------HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe------------------------------
Confidence 34444445444 899999999999999999999999999999873
Q ss_pred HhHHHHHHHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc
Q 001335 770 FMREEVKRELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG 849 (1097)
Q Consensus 770 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~ 849 (1097)
++.. .+.|...++.+.+.
T Consensus 80 ------------------------------------------------------------~~~~--~~~k~~~l~~~~~~ 97 (176)
T 3mmz_A 80 ------------------------------------------------------------VLHG--IDRKDLALKQWCEE 97 (176)
T ss_dssp ------------------------------------------------------------EEES--CSCHHHHHHHHHHH
T ss_pred ------------------------------------------------------------eEeC--CCChHHHHHHHHHH
Confidence 0000 14466666555543
Q ss_pred c---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHHHHh
Q 001335 850 A---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDLLLV 904 (1097)
Q Consensus 850 ~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~lll~ 904 (1097)
. .+.++++||+.||++|++.|++|+++.+... .++..||+++.+ .+.+..+++.
T Consensus 98 ~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~l~~ 160 (176)
T 3mmz_A 98 QGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHD-VVRGAARAVTTVPGGDGAIREIASWILG 160 (176)
T ss_dssp HTCCGGGEEEEECSGGGHHHHHHSSEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHHHHT
T ss_pred cCCCHHHEEEEcCCHHHHHHHHHCCCeEECCChhH-HHHHhCCEEecCCCCCcHHHHHHHHHHH
Confidence 2 3679999999999999999999999954332 378899999987 5556665443
No 30
>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}
Probab=98.69 E-value=1e-08 Score=114.25 Aligned_cols=65 Identities=15% Similarity=0.213 Sum_probs=50.8
Q ss_pred EEEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 831 CCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+.+..|. .|+..++.+.+..| ..+++|||+.||++|++.|++||+|.++... +|.+||+++.+.+
T Consensus 219 ~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 219 YIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANAPKN-VKAAANYQAKSND 288 (304)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTSCHH-HHHHCSEECCCGG
T ss_pred eEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCcCHH-HHHhccEEcCCCC
Confidence 3445554 59988888876433 5699999999999999999999999655443 8999999987643
No 31
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=98.67 E-value=3.5e-08 Score=107.01 Aligned_cols=58 Identities=22% Similarity=0.365 Sum_probs=46.4
Q ss_pred cHHHHHHHHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 838 QKAQVTSLVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 838 qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
.|+..++.+.+. ....|+++||+.||++|++.|++||+|.++. ..+|..||++..+.+
T Consensus 183 ~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~na~-~~~k~~A~~v~~~~~ 243 (258)
T 2pq0_A 183 SKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGNAH-EEVKRVADFVTKPVD 243 (258)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETTCC-HHHHHTCSEEECCGG
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCCCc-HHHHHhCCEEeCCCC
Confidence 388888877764 2356999999999999999999999995433 348899999986543
No 32
>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A
Probab=98.64 E-value=2.3e-08 Score=107.87 Aligned_cols=64 Identities=14% Similarity=0.093 Sum_probs=49.1
Q ss_pred EEeCc-ccHHHHHHHHHcc----cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 832 CRVSP-LQKAQVTSLVKKG----ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 832 ~r~sP-~qK~~iv~~lk~~----~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
..+.| ..|+..++.+.+. ....|++|||+.||++||+.|++||+|+++.....+..||+++.+.
T Consensus 172 ~ei~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 172 YTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp EEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTEEEESSHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCCccccchhceEEeccc
Confidence 45566 2399988888764 2357999999999999999999999996654233667889877653
No 33
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=98.63 E-value=4.2e-08 Score=101.11 Aligned_cols=116 Identities=17% Similarity=0.176 Sum_probs=82.4
Q ss_pred HHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhhh
Q 001335 708 IETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEAQ 787 (1097)
Q Consensus 708 I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1097)
|+.|+++|+++.++||+....+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999999842
Q ss_pred hcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeC--cccHHHHHHHHHcccCceEEEecCCCCChh
Q 001335 788 QYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGARKITLSIGDGANDVS 865 (1097)
Q Consensus 788 ~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~~~~~vlaiGDG~ND~~ 865 (1097)
++.... |+-...+++.+.- ....+++|||+.||++
T Consensus 88 ------------------------------------------~~~~~kpk~~~~~~~~~~~~~-~~~~~~~vGD~~~Di~ 124 (191)
T 3n1u_A 88 ------------------------------------------YYKGQVDKRSAYQHLKKTLGL-NDDEFAYIGDDLPDLP 124 (191)
T ss_dssp ------------------------------------------EECSCSSCHHHHHHHHHHHTC-CGGGEEEEECSGGGHH
T ss_pred ------------------------------------------ceeCCCChHHHHHHHHHHhCC-CHHHEEEECCCHHHHH
Confidence 111111 2222333333332 3567999999999999
Q ss_pred hhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHHHHhhhhhhHHHHhH
Q 001335 866 MIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDLLLVHGRWSYLRICK 915 (1097)
Q Consensus 866 ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~lll~~Gr~~~~~i~~ 915 (1097)
|++.|++++++.+... .++..||+++.+ .+.+..+ +...|..+.++..
T Consensus 125 ~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~~~ 178 (191)
T 3n1u_A 125 LIQQVGLGVAVSNAVP-QVLEFADWRTERTGGRGAVRELCDL-ILNAQNKAELAIT 178 (191)
T ss_dssp HHHHSSEEEECTTCCH-HHHHHSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHH
T ss_pred HHHHCCCEEEeCCccH-HHHHhCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHHHH
Confidence 9999999999954432 378899999987 3335554 3445555555443
No 34
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=98.62 E-value=3.9e-08 Score=108.23 Aligned_cols=192 Identities=14% Similarity=0.159 Sum_probs=102.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++-+.+.++|++|+++|++++++|||....+..+.+++++.... ...++.++..+.+.... .......+..+...+
T Consensus 22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~--~~~I~~NGa~i~~~~~~--~~i~~~~l~~~~~~~ 97 (282)
T 1rkq_A 22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPG--DYCITYNGALVQKAADG--STVAQTALSYDDYRF 97 (282)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTT--CEEEEGGGTEEEETTTC--CEEEECCBCHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCC--CeEEEeCCeEEEECCCC--eEEEEecCCHHHHHH
Confidence 46678999999999999999999999999999999999874321 23455666554331000 000001111111222
Q ss_pred HHHHHHhhhhcccccCCCeE-------------------------------------EEEEcCcc-chhhcChhHHHHHH
Q 001335 779 LNKCIDEAQQYIHSISGEKL-------------------------------------ALIIDGKC-LMYALDPSLRVILL 820 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~-------------------------------------~lvi~G~~-l~~~l~~~l~~~f~ 820 (1097)
+.+...+.+........... .+.+-+.. ....+.+.+.+.+.
T Consensus 98 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~ 177 (282)
T 1rkq_A 98 LEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVK 177 (282)
T ss_dssp HHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHH
T ss_pred HHHHHHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhc
Confidence 21111111100000000000 00000000 00000000111111
Q ss_pred -hhhccCCceEEEEeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 821 -NLSLNCSSVVCCRVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 821 -~l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.+.......-+.++.|. .|...++.+.+.. ...++++||+.||++|++.|++||+|.+... .++..||+++.+
T Consensus 178 ~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~-~~~~~a~~v~~~ 256 (282)
T 1rkq_A 178 EKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIP-SVKEVANFVTKS 256 (282)
T ss_dssp HHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHCSEECCC
T ss_pred CCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecCCcH-HHHhhCCEEecC
Confidence 11100011113466666 5999888887642 3569999999999999999999999955433 377889999865
Q ss_pred h
Q 001335 895 F 895 (1097)
Q Consensus 895 ~ 895 (1097)
.
T Consensus 257 ~ 257 (282)
T 1rkq_A 257 N 257 (282)
T ss_dssp T
T ss_pred C
Confidence 3
No 35
>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0
Probab=98.60 E-value=5.6e-08 Score=106.20 Aligned_cols=63 Identities=19% Similarity=0.268 Sum_probs=49.1
Q ss_pred eCcc--cHHHHHHHHHcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 834 VSPL--QKAQVTSLVKKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 834 ~sP~--qK~~iv~~lk~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
+.|. .|...++.+.+. ..+.+++|||+.||++|++.|++||+|+++.. +++..||+++.+.+-
T Consensus 194 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na~~-~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 194 IIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMKNSHQ-QLKDIATSICEDIFD 261 (274)
T ss_dssp EEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEETTSCH-HHHHHCSEEECCGGG
T ss_pred EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEecCccH-HHHHhhhheeCCCch
Confidence 4444 488888877654 23569999999999999999999999955543 388999999876443
No 36
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=98.59 E-value=3.9e-08 Score=109.19 Aligned_cols=64 Identities=17% Similarity=0.254 Sum_probs=50.2
Q ss_pred EEEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceecc-ch
Q 001335 831 CCRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIA-QF 895 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~-~~ 895 (1097)
+.++.|. .|+..++.+.+..+ ..+++|||+.||++|++.|++||+|.++.. .++..||+++. +.
T Consensus 215 ~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~ 284 (301)
T 2b30_A 215 HAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATD-SAKSHAKCVLPVSH 284 (301)
T ss_dssp CEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCH-HHHHHSSEECSSCT
T ss_pred ceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCCcH-HHHhhCCEEEccCC
Confidence 3455666 59999888876433 569999999999999999999999965443 37789999987 53
No 37
>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=98.58 E-value=1.4e-08 Score=110.72 Aligned_cols=64 Identities=30% Similarity=0.388 Sum_probs=50.3
Q ss_pred EEeCcc--cHHHHHHHHHcccC---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 832 CRVSPL--QKAQVTSLVKKGAR---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 832 ~r~sP~--qK~~iv~~lk~~~~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
.+..|. .|+..++.+.+..+ +.++++||+.||++|++.|++||+|.++... +|.+||++..+.+
T Consensus 186 ~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na~~~-~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 186 ADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEK-VQSVADFVTDTVD 254 (268)
T ss_dssp EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHH-HHHTCSEECCCTT
T ss_pred EEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCCcHH-HHHhcCEeeCCCC
Confidence 344554 59888888776533 5699999999999999999999999655443 8999999987643
No 38
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=98.54 E-value=1.4e-07 Score=94.44 Aligned_cols=110 Identities=18% Similarity=0.109 Sum_probs=81.0
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhh
Q 001335 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 786 (1097)
Q Consensus 707 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1097)
+++.|+++|+++.++||+....+..+++.+|+..
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------------------------- 72 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------------------------- 72 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE----------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE----------------------------------------------
Confidence 8999999999999999999999999999998842
Q ss_pred hhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCCC
Q 001335 787 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAND 863 (1097)
Q Consensus 787 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND 863 (1097)
.+.. .+.|...++.+.+. ..+.+++|||+.||
T Consensus 73 -------------------------------------------~~~~--~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~D 107 (164)
T 3e8m_A 73 -------------------------------------------LFQG--VVDKLSAAEELCNELGINLEQVAYIGDDLND 107 (164)
T ss_dssp -------------------------------------------EECS--CSCHHHHHHHHHHHHTCCGGGEEEECCSGGG
T ss_pred -------------------------------------------eecc--cCChHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1111 13344444444332 34679999999999
Q ss_pred hhhhhhcCeeEEecCccchhhhhhcceeccc------hHhHHHHHHhhhhhh
Q 001335 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQ------FRFLTDLLLVHGRWS 909 (1097)
Q Consensus 864 ~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~------~~~l~~lll~~Gr~~ 909 (1097)
+.|.+.|++++++.+... .++..||+++.+ .+.+...++ +|+|.
T Consensus 108 i~~~~~ag~~~~~~~~~~-~~~~~ad~v~~~~~~~g~~~e~~~~ll-~~~~~ 157 (164)
T 3e8m_A 108 AKLLKRVGIAGVPASAPF-YIRRLSTIFLEKRGGEGVFREFVEKVL-GINLE 157 (164)
T ss_dssp HHHHTTSSEEECCTTSCH-HHHTTCSSCCCCCTTTTHHHHHHHHHT-TCCHH
T ss_pred HHHHHHCCCeEEcCChHH-HHHHhCcEEeccCCCCcHHHHHHHHHH-ccCch
Confidence 999999999999943332 378899999987 334444444 66644
No 39
>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A
Probab=98.47 E-value=2e-07 Score=96.13 Aligned_cols=117 Identities=20% Similarity=0.279 Sum_probs=87.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.+.++.|++.|++++++||.....+..+ +.+|+... ...+...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~~~~~~----------------------------- 127 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-ANRAIFE----------------------------- 127 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EEEEEEE-----------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-eeeEEee-----------------------------
Confidence 7899999999999999999999999988887777 77776321 1111000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
++ . .-.....|..|...++.+ ....+++||
T Consensus 128 ------------------------~~-~----------------------~~~~~~~~~~k~~~l~~l---~~~~~i~iG 157 (201)
T 4ap9_A 128 ------------------------DG-K----------------------FQGIRLRFRDKGEFLKRF---RDGFILAMG 157 (201)
T ss_dssp ------------------------TT-E----------------------EEEEECCSSCHHHHHGGG---TTSCEEEEE
T ss_pred ------------------------CC-c----------------------eECCcCCccCHHHHHHhc---CcCcEEEEe
Confidence 00 0 011345567798888877 346789999
Q ss_pred CCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHHHH
Q 001335 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
|+.||+.|++.|++||+|.+... .||+++.+.+-+..+
T Consensus 158 D~~~Di~~~~~ag~~v~~~~~~~-----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 158 DGYADAKMFERADMGIAVGREIP-----GADLLVKDLKELVDF 195 (201)
T ss_dssp CTTCCHHHHHHCSEEEEESSCCT-----TCSEEESSHHHHHHH
T ss_pred CCHHHHHHHHhCCceEEECCCCc-----cccEEEccHHHHHHH
Confidence 99999999999999999955443 899999987776555
No 40
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=98.45 E-value=1.4e-07 Score=103.06 Aligned_cols=63 Identities=19% Similarity=0.202 Sum_probs=49.1
Q ss_pred EeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 833 RVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 833 r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+..|. .|...++.+.+.. ...++++||+.||++|++.|++||+|.++.. .++..||+++.+.+
T Consensus 184 ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~-~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 184 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAE-NIKQIARYATDDNN 251 (271)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred EEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeCCccH-HHHHhCCeeCcCCC
Confidence 44444 5998888887643 3569999999999999999999999955443 37889999987643
No 41
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=98.44 E-value=1.5e-07 Score=102.66 Aligned_cols=63 Identities=19% Similarity=0.294 Sum_probs=49.1
Q ss_pred EEeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccch
Q 001335 832 CRVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQF 895 (1097)
Q Consensus 832 ~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~ 895 (1097)
.++.|. .|...++.+.+.. ...++++||+.||++|++.|++||+|.+... ..+..||+++.+.
T Consensus 182 ~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIE-KVKEASDIVTLTN 249 (268)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCH-HHHHHCSEECCCT
T ss_pred EEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecCCCH-HHHhhCCEEEccC
Confidence 455665 5998888877642 3569999999999999999999999965433 3678899998753
No 42
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=98.44 E-value=4.5e-07 Score=93.10 Aligned_cols=110 Identities=15% Similarity=0.171 Sum_probs=80.0
Q ss_pred HHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHHHHHHHHhh
Q 001335 707 CIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRELNKCIDEA 786 (1097)
Q Consensus 707 ~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1097)
+|+.|+++|++++++||+....+..+++.+|+..
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------------------------- 94 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------------------------- 94 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce----------------------------------------------
Confidence 8999999999999999999999999999988731
Q ss_pred hhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEEEecCCCCC
Q 001335 787 QQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITLSIGDGAND 863 (1097)
Q Consensus 787 ~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vlaiGDG~ND 863 (1097)
++.. .+.|...++.+.+. ....+++|||+.||
T Consensus 95 -------------------------------------------~~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~D 129 (188)
T 2r8e_A 95 -------------------------------------------LYQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLID 129 (188)
T ss_dssp -------------------------------------------EECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGG
T ss_pred -------------------------------------------eecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHH
Confidence 1110 13344444444332 23579999999999
Q ss_pred hhhhhhcCeeEEecCccchhhhhhcceeccch-------HhHHHHHHhhhhh
Q 001335 864 VSMIQAAHIGVGISGQEGMQAVMASDFAIAQF-------RFLTDLLLVHGRW 908 (1097)
Q Consensus 864 ~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~-------~~l~~lll~~Gr~ 908 (1097)
+.|.+.|++++++.+.. ..++..||+++.+. .++..++-.+|+|
T Consensus 130 i~~a~~ag~~~~~~~~~-~~~~~~ad~v~~~~~~~g~~~~~l~~ll~~~~~~ 180 (188)
T 2r8e_A 130 WPVMEKVGLSVAVADAH-PLLIPRADYVTRIAGGRGAVREVCDLLLLAQGKL 180 (188)
T ss_dssp HHHHTTSSEEEECTTSC-TTTGGGSSEECSSCTTTTHHHHHHHHHHHHTTCC
T ss_pred HHHHHHCCCEEEecCcC-HHHHhcCCEEEeCCCCCcHHHHHHHHHHHhcCcH
Confidence 99999999999984332 22677899999885 3345554555654
No 43
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=98.42 E-value=1.2e-06 Score=96.54 Aligned_cols=65 Identities=25% Similarity=0.239 Sum_probs=50.1
Q ss_pred EEEeCccc--HHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 831 CCRVSPLQ--KAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 831 ~~r~sP~q--K~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
+.++.|.. |+..++.+.+.. ...++++||+.||++|++.|++||+|.+... ..+..||+++.+..
T Consensus 207 ~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~~~~~-~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 207 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNARE-DIKSIADAVTLTND 276 (288)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCH-HHHHHCSEECCCGG
T ss_pred cEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEcCCCH-HHHhhCceeecCCC
Confidence 44555654 988888877643 3569999999999999999999999955433 37788999987643
No 44
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=98.38 E-value=4.8e-07 Score=94.01 Aligned_cols=121 Identities=21% Similarity=0.266 Sum_probs=81.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++.|+++.++||+....+..+...+|+...-...+... ++
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------------------- 128 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVK-DG-------------------------- 128 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-TT--------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEEE-CC--------------------------
Confidence 577899999999999999999999999888888888777621000000000 00
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEE-eCcccHHHHHHHHHcc---cCceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
.++|+ +... ..+..|...+..+.+. ....+
T Consensus 129 ----------------------~~~~~------------------------~~~~~~~~~~K~~~l~~~~~~lgi~~~~~ 162 (211)
T 1l7m_A 129 ----------------------KLTGD------------------------VEGEVLKENAKGEILEKIAKIEGINLEDT 162 (211)
T ss_dssp ----------------------EEEEE------------------------EECSSCSTTHHHHHHHHHHHHHTCCGGGE
T ss_pred ----------------------EEcCC------------------------cccCccCCccHHHHHHHHHHHcCCCHHHE
Confidence 00000 0001 1134576666555432 23569
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
+++||+.||++|++.|+++++|.+.+. .+..||+++.+
T Consensus 163 ~~iGD~~~Di~~~~~ag~~~~~~~~~~--~~~~a~~v~~~ 200 (211)
T 1l7m_A 163 VAVGDGANDISMFKKAGLKIAFCAKPI--LKEKADICIEK 200 (211)
T ss_dssp EEEECSGGGHHHHHHCSEEEEESCCHH--HHTTCSEEECS
T ss_pred EEEecChhHHHHHHHCCCEEEECCCHH--HHhhcceeecc
Confidence 999999999999999999999964433 57789999876
No 45
>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*
Probab=98.38 E-value=3.1e-07 Score=98.59 Aligned_cols=187 Identities=16% Similarity=0.171 Sum_probs=99.2
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHH-HHHHH
Q 001335 702 EGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEV-KRELN 780 (1097)
Q Consensus 702 ~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 780 (1097)
+.+.++|++++ +|++++++|||....+..+.+++++... ...|+.++..+.... ..+.. ....+.... ...+.
T Consensus 22 ~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~---~~~I~~NGa~i~~~~-~~~~~-~~~~~~~~~~~~~~~ 95 (244)
T 1s2o_A 22 EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEP---DYWLTAVGSEIYHPE-GLDQH-WADYLSEHWQRDILQ 95 (244)
T ss_dssp HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCC---SEEEETTTTEEEETT-EECHH-HHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCC---CEEEECCCcEEEeCC-CcChH-HHHHHhccccHHHHH
Confidence 34566777755 6899999999999999999999887432 246677776654311 11111 111111000 01111
Q ss_pred HHHHhhhhcc-c---ccCCCeEEEEEcCccchhhcChhHHHHHHh----hhccCCceEEEEeCcc--cHHHHHHHHHccc
Q 001335 781 KCIDEAQQYI-H---SISGEKLALIIDGKCLMYALDPSLRVILLN----LSLNCSSVVCCRVSPL--QKAQVTSLVKKGA 850 (1097)
Q Consensus 781 ~~~~~~~~~~-~---~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~----l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~ 850 (1097)
.......... . ......+.+..+....... .+.+.+.+.. +.......-+.++.|. .|...++.+.+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~ 174 (244)
T 1s2o_A 96 AIADGFEALKPQSPLEQNPWKISYHLDPQACPTV-IDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHL 174 (244)
T ss_dssp HHHHTCTTEEECCGGGCBTTBEEEEECTTSCTHH-HHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHT
T ss_pred HHHHhccCccccCcccCCCeEEEEEeChhhHHHH-HHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHh
Confidence 1111111000 0 0011122222222111110 1122333321 1110111124466666 4999888887643
Q ss_pred C---ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhh-------cceeccchH
Q 001335 851 R---KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMA-------SDFAIAQFR 896 (1097)
Q Consensus 851 ~---~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~-------AD~vi~~~~ 896 (1097)
+ ..++++||+.||++|++.|++||+|++... ..+.. ||++..+..
T Consensus 175 ~~~~~~~~~~GD~~nD~~m~~~~g~~va~~na~~-~~k~~a~~~~~~a~~v~~~~~ 229 (244)
T 1s2o_A 175 AMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQP-ELLHWYDQWGDSRHYRAQSSH 229 (244)
T ss_dssp TCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCH-HHHHHHHHHCCTTEEECSSCH
T ss_pred CCCHHHEEEECCchhhHHHHhccCcEEEEcCCcH-HHHHHHhcccccceeecCCcc
Confidence 3 569999999999999999999999954433 35664 789876543
No 46
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=98.36 E-value=6.7e-07 Score=93.57 Aligned_cols=125 Identities=21% Similarity=0.270 Sum_probs=87.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-...+... ++
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~-~~------------------------- 127 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVE-ND------------------------- 127 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-TT-------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEe-CC-------------------------
Confidence 4689999999999999999999999999999999999988843111111000 00
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEe-CcccHHHHHHHHHcc---cCce
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV-SPLQKAQVTSLVKKG---ARKI 853 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~-sP~qK~~iv~~lk~~---~~~~ 853 (1097)
.++| .+...+ ..+.|...++.+.+. ....
T Consensus 128 -----------------------~~~~------------------------~~~~~~~~~k~k~~~~~~~~~~~g~~~~~ 160 (217)
T 3m1y_A 128 -----------------------ALNG------------------------LVTGHMMFSHSKGEMLLVLQRLLNISKTN 160 (217)
T ss_dssp -----------------------EEEE------------------------EEEESCCSTTHHHHHHHHHHHHHTCCSTT
T ss_pred -----------------------EEEe------------------------eeccCCCCCCChHHHHHHHHHHcCCCHhH
Confidence 0000 011111 234466666655443 2356
Q ss_pred EEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 854 TLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 854 vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
+++|||+.||+.|++.|++++++.+.+. .+..||+++.+.++
T Consensus 161 ~i~vGDs~~Di~~a~~aG~~~~~~~~~~--l~~~ad~v~~~~dl 202 (217)
T 3m1y_A 161 TLVVGDGANDLSMFKHAHIKIAFNAKEV--LKQHATHCINEPDL 202 (217)
T ss_dssp EEEEECSGGGHHHHTTCSEEEEESCCHH--HHTTCSEEECSSBG
T ss_pred EEEEeCCHHHHHHHHHCCCeEEECccHH--HHHhcceeecccCH
Confidence 9999999999999999999999944433 77899999987665
No 47
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=98.30 E-value=2.2e-06 Score=91.12 Aligned_cols=181 Identities=18% Similarity=0.167 Sum_probs=97.3
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
..+.+.+.++|++++++|++++++||+....+..+...+|+.. . .+..++..+....+. .....+ + ...
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~---~--~i~~nGa~i~~~~~~----~~~~~l-~-~~~ 87 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG---P--VVAEDGGAISYKKKR----IFLASM-D-EEW 87 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCS---C--EEEGGGTEEEETTEE----EESCCC-S-HHH
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCC---e--EEEeCCcEEEeCCEE----EEeccH-H-HHH
Confidence 3567888999999999999999999999999999999988632 1 233443322210000 000000 0 011
Q ss_pred HHHHHHH-hh-hhcc---cccCCCeEEEEEc-CccchhhcChhHHHHHHhhhccCCce---EEEEeCcc--cHHHHHHHH
Q 001335 778 ELNKCID-EA-QQYI---HSISGEKLALIID-GKCLMYALDPSLRVILLNLSLNCSSV---VCCRVSPL--QKAQVTSLV 846 (1097)
Q Consensus 778 ~~~~~~~-~~-~~~~---~~~~~~~~~lvi~-G~~l~~~l~~~l~~~f~~l~~~~~~v---i~~r~sP~--qK~~iv~~l 846 (1097)
++..... .. +... .......+ .+.+ +.. .+........+......+ .+.+..|. .|...++.+
T Consensus 88 ~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~ 161 (231)
T 1wr8_A 88 ILWNEIRKRFPNARTSYTMPDRRAGL-VIMRETIN-----VETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKA 161 (231)
T ss_dssp HHHHHHHHHCTTCCBCTTGGGCSSCE-EECTTTSC-----HHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCceEEecCCCceeeE-EEECCCCC-----HHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHH
Confidence 1111111 11 0000 00000011 1111 100 011122221111111111 12344444 588888877
Q ss_pred Hcc---cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 847 KKG---ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 847 k~~---~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
.+. ....++++||+.||++|++.|++||+|.+... ..+..||+++.+..
T Consensus 162 ~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~~~~~-~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 162 SEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPK-ILKENADYVTKKEY 213 (231)
T ss_dssp HHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHTTCSEECSSCH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEecCCCH-HHHhhCCEEecCCC
Confidence 653 23569999999999999999999999954433 36778999987643
No 48
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=98.29 E-value=2.7e-07 Score=99.08 Aligned_cols=50 Identities=22% Similarity=0.325 Sum_probs=41.2
Q ss_pred EEEeCcc--cHHHHHHHHHcccCceEEEecC----CCCChhhhhhcC-eeEEecCccc
Q 001335 831 CCRVSPL--QKAQVTSLVKKGARKITLSIGD----GANDVSMIQAAH-IGVGISGQEG 881 (1097)
Q Consensus 831 ~~r~sP~--qK~~iv~~lk~~~~~~vlaiGD----G~ND~~ml~~Ad-vGIam~g~e~ 881 (1097)
+.++.|. .|+..++.+.+ ....|+++|| |.||++||+.|+ +|++|++.+.
T Consensus 178 ~leI~~~gv~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n~~~ 234 (246)
T 3f9r_A 178 SFDVFPVGWDKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTSYKD 234 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSSHHH
T ss_pred EEEEEeCCCCHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCCHHH
Confidence 4556666 49999998887 6788999999 799999999996 8999966544
No 49
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=98.28 E-value=2.1e-06 Score=93.93 Aligned_cols=53 Identities=9% Similarity=0.119 Sum_probs=42.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAI 755 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~ 755 (1097)
.+-+.+.++|++|+++|++++++|||....+..+..++++.. . ..|+.++..+
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~--~--~~I~~NGa~i 78 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG--L--PLIAENGAVI 78 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT--S--CEEEGGGTEE
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC--C--eEEEeCCCeE
Confidence 455778999999999999999999999999999999998732 0 2445555544
No 50
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.28 E-value=1.9e-06 Score=100.27 Aligned_cols=120 Identities=25% Similarity=0.321 Sum_probs=88.2
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+...-...+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~------------------------------- 304 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELE------------------------------- 304 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEE-------------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEE-------------------------------
Confidence 7999999999999999999999999999999999999998421100000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEe-----CcccHHHHHHHHHccc---
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV-----SPLQKAQVTSLVKKGA--- 850 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~-----sP~qK~~iv~~lk~~~--- 850 (1097)
+.+| .+..+. .++-|..+++.+.+..
T Consensus 305 ----------------------~~dg------------------------~~tg~~~~~v~~~kpk~~~~~~~~~~~gi~ 338 (415)
T 3p96_A 305 ----------------------IVDG------------------------TLTGRVVGPIIDRAGKATALREFAQRAGVP 338 (415)
T ss_dssp ----------------------EETT------------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCC
T ss_pred ----------------------EeCC------------------------EEEeeEccCCCCCcchHHHHHHHHHHcCcC
Confidence 0111 022221 1455777666665432
Q ss_pred CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 851 RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 851 ~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
...+++||||.||+.|++.||+|+++.+.+. .+..||+++...++
T Consensus 339 ~~~~i~vGD~~~Di~~a~~aG~~va~~~~~~--~~~~ad~~i~~~~l 383 (415)
T 3p96_A 339 MAQTVAVGDGANDIDMLAAAGLGIAFNAKPA--LREVADASLSHPYL 383 (415)
T ss_dssp GGGEEEEECSGGGHHHHHHSSEEEEESCCHH--HHHHCSEEECSSCT
T ss_pred hhhEEEEECCHHHHHHHHHCCCeEEECCCHH--HHHhCCEEEccCCH
Confidence 3579999999999999999999999954443 78899999876555
No 51
>1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A*
Probab=98.26 E-value=2.7e-06 Score=83.46 Aligned_cols=107 Identities=15% Similarity=0.230 Sum_probs=75.5
Q ss_pred cCChhHHHHHHHHHHC-CcEEEeecCCeEEEEeccccccCceeeEEEEEeEeecCCCCCceEEEEEEecCCcEEEEEecc
Q 001335 532 AASPDEAALVTAAKNF-GFFFYRRTPTMIYVRESHVEKMGKMQDVCYEILNVLEFNSTRKRQSVVCRYADGRLVLYCKGA 610 (1097)
Q Consensus 532 ~~sp~e~al~~~a~~~-g~~~~~r~~~~~~i~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~l~~KGa 610 (1097)
+++|...|++++|++. |..... ... ......+|++..++..|.+ +|+ -+.+|+
T Consensus 49 SeHPla~AIv~~A~~~~~l~~~~--------------------~~~-~~~~~~~F~a~~G~~Gv~v---~G~--~v~vGn 102 (156)
T 1svj_A 49 DETPEGRSIVILAKQRFNLRERD--------------------VQS-LHATFVPFTAQSRMSGINI---DNR--MIRKGS 102 (156)
T ss_dssp CCSHHHHHHHHHHHHHTTCCCCC--------------------HHH-HTCEEEEEETTTTEEEEEE---TTE--EEEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCccc--------------------ccc-cccceeeccccCCCCeEEE---CCE--EEEEeC
Confidence 5799999999999986 643211 000 0011357888777777744 453 456799
Q ss_pred hhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceE
Q 001335 611 DSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTL 690 (1097)
Q Consensus 611 ~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~l 690 (1097)
+..|...+...+......+.+.+++++.+|.+++++|. |-.+
T Consensus 103 ~~~i~~l~~~~gi~~~~~~~~~~~~la~~G~T~v~VA~--------------------------------------d~~l 144 (156)
T 1svj_A 103 VDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVE--------------------------------------GSRV 144 (156)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHHHHHTTCEEEEEEE--------------------------------------TTEE
T ss_pred cHHHHHHHHHcCCCCcHHHHHHHHHHHhCCCCEEEEEE--------------------------------------CCEE
Confidence 88777766543322334577788899999999999994 6689
Q ss_pred EEEeeeccccCC
Q 001335 691 IGCTAIEDKLQE 702 (1097)
Q Consensus 691 lG~~~ieD~lr~ 702 (1097)
+|++++.|++|+
T Consensus 145 ~GvIalaD~iK~ 156 (156)
T 1svj_A 145 LGVIALKDIVKG 156 (156)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEecCCCC
Confidence 999999999996
No 52
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=98.23 E-value=7.3e-07 Score=96.70 Aligned_cols=59 Identities=29% Similarity=0.406 Sum_probs=46.7
Q ss_pred cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 838 QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 838 qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
.|...++.+.+.. ...+++|||+.||++|++.|++||+|.+... ..+..||+++.+..-
T Consensus 187 ~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n~~~-~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 187 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKE-DVKAAADYVTAPIDE 248 (261)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCH-HHHHHSSEECCCGGG
T ss_pred ChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecCccH-HHHhhCCEEeccCch
Confidence 5888777776542 3579999999999999999999999954433 367899999877655
No 53
>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}
Probab=98.23 E-value=1.5e-06 Score=90.51 Aligned_cols=134 Identities=18% Similarity=0.230 Sum_probs=84.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+++.++++.|+++|+++.++||.....+..+.+.+|+.... .+..
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~~------------------------------ 129 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFAV------------------------------ 129 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEEE------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEEe------------------------------
Confidence 37899999999999999999999999999999999999884211 1100
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
.++.++.... ..+.....+|..|...+..........++++|
T Consensus 130 --------------------~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vG 171 (219)
T 3kd3_A 130 --------------------ETIWNSDGSF------------------KELDNSNGACDSKLSAFDKAKGLIDGEVIAIG 171 (219)
T ss_dssp --------------------EEEECTTSBE------------------EEEECTTSTTTCHHHHHHHHGGGCCSEEEEEE
T ss_pred --------------------eeeecCCCce------------------eccCCCCCCcccHHHHHHHHhCCCCCCEEEEE
Confidence 0011000000 00011112344555555443222457899999
Q ss_pred CCCCChhhhhh--cCeeEEec-CccchhhhhhcceeccchHhHHHHH
Q 001335 859 DGANDVSMIQA--AHIGVGIS-GQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 859 DG~ND~~ml~~--AdvGIam~-g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
|+.||++|+++ +.++|++. +......+..||+++.+..-+..+|
T Consensus 172 D~~~Di~~~~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 172 DGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp SSHHHHHHHHHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred CCHhHHHHHhCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHhh
Confidence 99999999975 22444442 2233336778999999988776653
No 54
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=98.21 E-value=2.5e-06 Score=88.43 Aligned_cols=130 Identities=18% Similarity=0.125 Sum_probs=87.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-....
T Consensus 69 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~------------------------------- 117 (205)
T 3m9l_A 69 SRPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEAD------------------------------- 117 (205)
T ss_dssp EEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGG-------------------------------
T ss_pred CCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcce-------------------------------
Confidence 3678999999999999999999999999999988888888742110000
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCc--ccHHHHHHHHHcccCceEE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSP--LQKAQVTSLVKKGARKITL 855 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP--~qK~~iv~~lk~~~~~~vl 855 (1097)
++++. . ....| .--..+.+.+.- ....++
T Consensus 118 -----------------------i~~~~------------------------~-~~~kp~~~~~~~~~~~~g~-~~~~~i 148 (205)
T 3m9l_A 118 -----------------------VLGRD------------------------E-APPKPHPGGLLKLAEAWDV-SPSRMV 148 (205)
T ss_dssp -----------------------EECTT------------------------T-SCCTTSSHHHHHHHHHTTC-CGGGEE
T ss_pred -----------------------EEeCC------------------------C-CCCCCCHHHHHHHHHHcCC-CHHHEE
Confidence 00000 0 00011 111222333322 346799
Q ss_pred EecCCCCChhhhhhcCe-eEEecCccchhhhhhcceeccchHhHHHHHHhhhhh
Q 001335 856 SIGDGANDVSMIQAAHI-GVGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRW 908 (1097)
Q Consensus 856 aiGDG~ND~~ml~~Adv-GIam~g~e~~~a~~~AD~vi~~~~~l~~lll~~Gr~ 908 (1097)
+|||+.||+.|.+.|++ +|+|.+... ..+..||+++.+..-|..++=.+++.
T Consensus 149 ~iGD~~~Di~~a~~aG~~~i~v~~~~~-~~~~~ad~v~~~~~el~~~~~~~~~~ 201 (205)
T 3m9l_A 149 MVGDYRFDLDCGRAAGTRTVLVNLPDN-PWPELTDWHARDCAQLRDLLSAEGHH 201 (205)
T ss_dssp EEESSHHHHHHHHHHTCEEEECSSSSC-SCGGGCSEECSSHHHHHHHHHHTTCC
T ss_pred EECCCHHHHHHHHHcCCEEEEEeCCCC-cccccCCEEeCCHHHHHHHHHhcccc
Confidence 99999999999999999 999944332 25678999999988877764444443
No 55
>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24
Probab=98.20 E-value=2.2e-06 Score=96.52 Aligned_cols=76 Identities=14% Similarity=0.228 Sum_probs=56.1
Q ss_pred cccHHHHHHHHHcc-cCceEEEecCCCCChhhhhhc----CeeEEecCccchhhhhhcceeccchH------hHHHHHHh
Q 001335 836 PLQKAQVTSLVKKG-ARKITLSIGDGANDVSMIQAA----HIGVGISGQEGMQAVMASDFAIAQFR------FLTDLLLV 904 (1097)
Q Consensus 836 P~qK~~iv~~lk~~-~~~~vlaiGDG~ND~~ml~~A----dvGIam~g~e~~~a~~~AD~vi~~~~------~l~~lll~ 904 (1097)
+.+|+..++.+... ..++|+++|||.||++|++.| ++||+| ++.. .++..||+++.+.+ .+.++ +.
T Consensus 205 g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na~~-~lk~~Ad~v~~~~~~dGV~~~l~~~-~~ 281 (332)
T 1y8a_A 205 AGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NGNE-YALKHADVVIISPTAMSEAKVIELF-ME 281 (332)
T ss_dssp HHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SCCH-HHHTTCSEEEECSSTHHHHHHHHHH-HH
T ss_pred CCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cCCH-HHHhhCcEEecCCCCCHHHHHHHHH-HH
Confidence 45698888866541 114599999999999999999 999999 5433 38899999987532 24554 67
Q ss_pred hhhhhHHHHhH
Q 001335 905 HGRWSYLRICK 915 (1097)
Q Consensus 905 ~Gr~~~~~i~~ 915 (1097)
.||..+ ++-+
T Consensus 282 ~~~~~~-~~~~ 291 (332)
T 1y8a_A 282 RKERAF-EVLS 291 (332)
T ss_dssp HGGGGG-GGGG
T ss_pred cCCchh-HHHH
Confidence 888877 5444
No 56
>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*
Probab=98.18 E-value=1.4e-06 Score=94.49 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=47.6
Q ss_pred EEeCccc--HHHHHHHHHcc-cCceEEEecC----CCCChhhhhhcC-eeEEecCccchhhhhhcceeccc
Q 001335 832 CRVSPLQ--KAQVTSLVKKG-ARKITLSIGD----GANDVSMIQAAH-IGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 832 ~r~sP~q--K~~iv~~lk~~-~~~~vlaiGD----G~ND~~ml~~Ad-vGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
.++.|.. |+..++.+ .. ....|++||| |.||++||+.|+ +|++|.++. ..++..||++...
T Consensus 189 leI~~~~vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~NA~-~~~k~~a~~v~~~ 257 (262)
T 2fue_A 189 FDVFPEGWDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQ-DTVQRCREIFFPE 257 (262)
T ss_dssp EEEEETTCSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHH-HHHHHHHHHHCTT
T ss_pred EEEecCCCCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEecCCC-HHHHHhhheeCCC
Confidence 4566654 99999988 32 4467999999 999999999999 599995443 3488889987654
No 57
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=98.17 E-value=3.1e-06 Score=94.35 Aligned_cols=121 Identities=17% Similarity=0.201 Sum_probs=82.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|+++|+++.++||.....+..+.+.+|+...-...+.... +
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~d-g-------------------------- 231 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRD-N-------------------------- 231 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEET-T--------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeC-C--------------------------
Confidence 4899999999999999999999999999999999999998421110000000 0
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEE-eCcccHHHHHHHHHcc---cCceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCR-VSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r-~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
..+|. +... ..++-|..+++.+.+. ....+
T Consensus 232 ----------------------~~tg~------------------------i~~~~~~~kpkp~~~~~~~~~lgv~~~~~ 265 (317)
T 4eze_A 232 ----------------------VLTDN------------------------ITLPIMNAANKKQTLVDLAARLNIATENI 265 (317)
T ss_dssp ----------------------EEEEE------------------------ECSSCCCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred ----------------------eeeee------------------------EecccCCCCCCHHHHHHHHHHcCCCcceE
Confidence 00000 0000 1234455555544332 23579
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
++|||+.||+.|.+.||+|+++.+.+. .+..||.++..
T Consensus 266 i~VGDs~~Di~aa~~AG~~va~~~~~~--~~~~a~~~i~~ 303 (317)
T 4eze_A 266 IACGDGANDLPMLEHAGTGIAWKAKPV--VREKIHHQINY 303 (317)
T ss_dssp EEEECSGGGHHHHHHSSEEEEESCCHH--HHHHCCEEESS
T ss_pred EEEeCCHHHHHHHHHCCCeEEeCCCHH--HHHhcCeeeCC
Confidence 999999999999999999999954433 67788888753
No 58
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=98.16 E-value=2.5e-06 Score=90.50 Aligned_cols=125 Identities=21% Similarity=0.188 Sum_probs=83.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
.++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 149 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTV--------------------------------- 149 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheee---------------------------------
Confidence 45789999999999999999999999999988888888887432110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
++.+.... ...-.|+--..+.+.+.- ....+++|
T Consensus 150 -----------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~lg~-~~~~~i~v 183 (237)
T 4ex6_A 150 -----------------------IAGDDSVE----------------------RGKPHPDMALHVARGLGI-PPERCVVI 183 (237)
T ss_dssp -----------------------EECTTTSS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEE
T ss_pred -----------------------EEeCCCCC----------------------CCCCCHHHHHHHHHHcCC-CHHHeEEE
Confidence 11111000 000011112233333332 34679999
Q ss_pred cCCCCChhhhhhcCe---eEEecCccchhhhh-hcceeccchHhHHHH
Q 001335 858 GDGANDVSMIQAAHI---GVGISGQEGMQAVM-ASDFAIAQFRFLTDL 901 (1097)
Q Consensus 858 GDG~ND~~ml~~Adv---GIam~g~e~~~a~~-~AD~vi~~~~~l~~l 901 (1097)
||+.||+.|.+.||+ +|++++......+. .||+++.+..-+..+
T Consensus 184 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 184 GDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp ESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred cCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 999999999999999 66664333222343 799999998887766
No 59
>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*
Probab=98.15 E-value=8.5e-06 Score=88.09 Aligned_cols=54 Identities=15% Similarity=0.278 Sum_probs=44.4
Q ss_pred ccHHHHHHHHHcccC-----ceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccc
Q 001335 837 LQKAQVTSLVKKGAR-----KITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQ 894 (1097)
Q Consensus 837 ~qK~~iv~~lk~~~~-----~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~ 894 (1097)
..|...++.+.+..+ ..++++||+.||++|++.|++||+|.++.. . .++++...
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~--~--~~~~~~~~ 233 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP--P--EGVLATPA 233 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC--C--TTCEECSS
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh--c--CCcEEeCC
Confidence 578998888876533 679999999999999999999999976665 2 67888765
No 60
>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A
Probab=98.15 E-value=4.5e-07 Score=97.43 Aligned_cols=58 Identities=21% Similarity=0.245 Sum_probs=44.2
Q ss_pred EEeCccc--HHHHHHHHHcc-cCceEEEecC----CCCChhhhhhcCe-eEEecCccchhhhhhccee
Q 001335 832 CRVSPLQ--KAQVTSLVKKG-ARKITLSIGD----GANDVSMIQAAHI-GVGISGQEGMQAVMASDFA 891 (1097)
Q Consensus 832 ~r~sP~q--K~~iv~~lk~~-~~~~vlaiGD----G~ND~~ml~~Adv-GIam~g~e~~~a~~~AD~v 891 (1097)
.++.|.. |+..++.+ .. ..+.|++||| |.||++||+.|+. |++|.++... +|..||||
T Consensus 180 leI~~~~~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~Na~~~-vk~~A~~v 245 (246)
T 2amy_A 180 FDVFPDGWDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICELLF 245 (246)
T ss_dssp EEEEETTCSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHHHHC
T ss_pred EEEecCCCchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeCCCHH-HHHHHhhc
Confidence 4556654 99888888 32 4467999999 9999999999988 9999665443 88999986
No 61
>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6
Probab=98.11 E-value=5.4e-06 Score=86.81 Aligned_cols=122 Identities=11% Similarity=0.126 Sum_probs=79.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-...
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~--------------------------------- 140 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDAL--------------------------------- 140 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEE---------------------------------
Confidence 46789999999999999999999999888887777777764221110
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
+.+.... ...-.|.--..+.+.+.- ....+++||
T Consensus 141 -----------------------~~~~~~~----------------------~~kp~~~~~~~~~~~~~i-~~~~~i~iG 174 (226)
T 1te2_A 141 -----------------------ASAEKLP----------------------YSKPHPQVYLDCAAKLGV-DPLTCVALE 174 (226)
T ss_dssp -----------------------EECTTSS----------------------CCTTSTHHHHHHHHHHTS-CGGGEEEEE
T ss_pred -----------------------EeccccC----------------------CCCCChHHHHHHHHHcCC-CHHHeEEEe
Confidence 0000000 000001111233333332 346799999
Q ss_pred CCCCChhhhhhcCeeEEe----cCccchhhhhhcceeccchHhHHH
Q 001335 859 DGANDVSMIQAAHIGVGI----SGQEGMQAVMASDFAIAQFRFLTD 900 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam----~g~e~~~a~~~AD~vi~~~~~l~~ 900 (1097)
|+.||+.|++.|++++++ .+... ..+..||+++.+..-+..
T Consensus 175 D~~nDi~~a~~aG~~~~~~~~~~~~~~-~~~~~a~~v~~~~~el~~ 219 (226)
T 1te2_A 175 DSVNGMIASKAARMRSIVVPAPEAQND-PRFVLANVKLSSLTELTA 219 (226)
T ss_dssp SSHHHHHHHHHTTCEEEECCCTTTTTC-GGGGGSSEECSCGGGCCH
T ss_pred CCHHHHHHHHHcCCEEEEEcCCCCccc-ccccccCeEECCHHHHhH
Confidence 999999999999999988 22221 256789999988766433
No 62
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=98.09 E-value=7e-06 Score=81.72 Aligned_cols=105 Identities=12% Similarity=0.113 Sum_probs=76.6
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+++.++|+.|+++|++++++||+....+..+.+.+|+..
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-------------------------------------- 77 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE-------------------------------------- 77 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------------------------------------
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------------------------------------
Confidence 345678899999999999999999999999999999988731
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHH----HHHHcccCceE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVT----SLVKKGARKIT 854 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv----~~lk~~~~~~v 854 (1097)
.+.. ++.|...+ +.+.- ..+.+
T Consensus 78 ---------------------------------------------------~~~~--~kp~~~~~~~~~~~~~~-~~~~~ 103 (162)
T 2p9j_A 78 ---------------------------------------------------IYTG--SYKKLEIYEKIKEKYSL-KDEEI 103 (162)
T ss_dssp ---------------------------------------------------EEEC--C--CHHHHHHHHHHTTC-CGGGE
T ss_pred ---------------------------------------------------hccC--CCCCHHHHHHHHHHcCC-CHHHE
Confidence 0101 12223332 22222 34579
Q ss_pred EEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchH
Q 001335 855 LSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFR 896 (1097)
Q Consensus 855 laiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~ 896 (1097)
++|||+.||+.|.+.|++++++.+.. ...+..||+++.+..
T Consensus 104 ~~vGD~~~Di~~a~~ag~~~~~~~~~-~~~~~~a~~v~~~~~ 144 (162)
T 2p9j_A 104 GFIGDDVVDIEVMKKVGFPVAVRNAV-EEVRKVAVYITQRNG 144 (162)
T ss_dssp EEEECSGGGHHHHHHSSEEEECTTSC-HHHHHHCSEECSSCS
T ss_pred EEECCCHHHHHHHHHCCCeEEecCcc-HHHHhhCCEEecCCC
Confidence 99999999999999999999884332 226678999988744
No 63
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=98.08 E-value=6.1e-06 Score=86.68 Aligned_cols=121 Identities=17% Similarity=0.152 Sum_probs=85.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 131 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDA--------------------------------- 131 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheee---------------------------------
Confidence 36789999999999999999999999998888888888887432111
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCc--ccHHHHHHHHHcc---cCc
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSP--LQKAQVTSLVKKG---ARK 852 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP--~qK~~iv~~lk~~---~~~ 852 (1097)
++.+...+ +-|...++.+.+. ...
T Consensus 132 ---------------------------------------------------~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 160 (226)
T 3mc1_A 132 ---------------------------------------------------IVGSSLDGKLSTKEDVIRYAMESLNIKSD 160 (226)
T ss_dssp ---------------------------------------------------EEEECTTSSSCSHHHHHHHHHHHHTCCGG
T ss_pred ---------------------------------------------------eeccCCCCCCCCCHHHHHHHHHHhCcCcc
Confidence 11122111 2244444433332 335
Q ss_pred eEEEecCCCCChhhhhhcCe---eEEecCccchh-hhhhcceeccchHhHHHHH
Q 001335 853 ITLSIGDGANDVSMIQAAHI---GVGISGQEGMQ-AVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 853 ~vlaiGDG~ND~~ml~~Adv---GIam~g~e~~~-a~~~AD~vi~~~~~l~~ll 902 (1097)
.+++|||+.||+.|.+.|++ +|+++...... .+..||+++.++.-+..++
T Consensus 161 ~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 161 DAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp GEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 79999999999999999999 55553322221 2578999999988887774
No 64
>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A
Probab=98.03 E-value=2.9e-05 Score=80.43 Aligned_cols=123 Identities=18% Similarity=0.188 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++. +++.++|+.....+..+.+.+|+...-...+....+.
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~-------------------------- 121 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSD-------------------------- 121 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTS--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCc--------------------------
Confidence 5789999999999999 9999999999999999999998843100001110000
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEE--EeCcccHHHHHHHHHcccCceEEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCC--RVSPLQKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~--r~sP~qK~~iv~~lk~~~~~~vla 856 (1097)
.... .-.|..|...++.+.. ....+++
T Consensus 122 --------------------------------------------------~~~~~~~p~p~~~~~~l~~l~~-~~~~~~~ 150 (206)
T 1rku_A 122 --------------------------------------------------RVVGYQLRQKDPKRQSVIAFKS-LYYRVIA 150 (206)
T ss_dssp --------------------------------------------------CEEEEECCSSSHHHHHHHHHHH-TTCEEEE
T ss_pred --------------------------------------------------eEEeeecCCCchHHHHHHHHHh-cCCEEEE
Confidence 0111 1357778888888876 5678999
Q ss_pred ecCCCCChhhhhhcCeeEEecCccchhhhhh-ccee-ccchHhHHHH
Q 001335 857 IGDGANDVSMIQAAHIGVGISGQEGMQAVMA-SDFA-IAQFRFLTDL 901 (1097)
Q Consensus 857 iGDG~ND~~ml~~AdvGIam~g~e~~~a~~~-AD~v-i~~~~~l~~l 901 (1097)
|||+.||+.|.+.|++++++...+. .+.. ++++ +.+..-+..+
T Consensus 151 iGD~~~Di~~a~~aG~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 151 AGDSYNDTTMLSEAHAGILFHAPEN--VIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp EECSSTTHHHHHHSSEEEEESCCHH--HHHHCTTSCEECSHHHHHHH
T ss_pred EeCChhhHHHHHhcCccEEECCcHH--HHHHHhhhccccchHHHHHH
Confidence 9999999999999999999844332 3443 4554 5555555444
No 65
>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A
Probab=98.02 E-value=7e-06 Score=86.44 Aligned_cols=128 Identities=20% Similarity=0.243 Sum_probs=86.1
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.|++.++++.|+++|++++++||.....+..+.+.+|+...+ .+...
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~---------------------------- 134 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANR---------------------------- 134 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEEC----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeee----------------------------
Confidence 368999999999999999999999999999999999999985311 11000
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEe------CcccHHHHHHHHHcccC
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRV------SPLQKAQVTSLVKKGAR 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~------sP~qK~~iv~~lk~~~~ 851 (1097)
+..+. ...+.+.- .+..|..+++.+.+..+
T Consensus 135 ----------------------~~~~~----------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~ 170 (225)
T 1nnl_A 135 ----------------------LKFYF----------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFH 170 (225)
T ss_dssp ----------------------EEECT----------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHC
T ss_pred ----------------------EEEcC----------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcC
Confidence 00000 00011111 12356666665544223
Q ss_pred -ceEEEecCCCCChhhhhhcCeeEEecCcc-chhhhhhcceeccchHhHH
Q 001335 852 -KITLSIGDGANDVSMIQAAHIGVGISGQE-GMQAVMASDFAIAQFRFLT 899 (1097)
Q Consensus 852 -~~vlaiGDG~ND~~ml~~AdvGIam~g~e-~~~a~~~AD~vi~~~~~l~ 899 (1097)
..+++|||+.||+.|.+.||++|++.... .......+|+++.++.-+.
T Consensus 171 ~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~ 220 (225)
T 1nnl_A 171 FKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 220 (225)
T ss_dssp CSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred CCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHH
Confidence 57999999999999999999988884322 1223456899988876543
No 66
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=97.98 E-value=1.5e-05 Score=84.20 Aligned_cols=41 Identities=17% Similarity=0.033 Sum_probs=38.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.+.++.|++.|+++.++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57999999999999999999999999999999999999984
No 67
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=97.90 E-value=1.5e-05 Score=84.76 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=83.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++.|++++++|+.....+..+.+.+|+...-...
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 156 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYI-------------------------------- 156 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEE--------------------------------
Confidence 467899999999999999999999999988888888888874321111
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeC--cccHHHHHHHHHcc---c-C
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKG---A-R 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~---~-~ 851 (1097)
+++... .+-|..+++.+.+. . .
T Consensus 157 ----------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 184 (240)
T 3sd7_A 157 ----------------------------------------------------AGSNLDGTRVNKNEVIQYVLDLCNVKDK 184 (240)
T ss_dssp ----------------------------------------------------EEECTTSCCCCHHHHHHHHHHHHTCCCG
T ss_pred ----------------------------------------------------EeccccCCCCCCHHHHHHHHHHcCCCCC
Confidence 111111 12233444333322 3 5
Q ss_pred ceEEEecCCCCChhhhhhcCe---eEEecCccchh-hhhhcceeccchHhHHHHH
Q 001335 852 KITLSIGDGANDVSMIQAAHI---GVGISGQEGMQ-AVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 852 ~~vlaiGDG~ND~~ml~~Adv---GIam~g~e~~~-a~~~AD~vi~~~~~l~~ll 902 (1097)
..+++|||+.||+.|.+.|++ +|+++...... .+..||+++.++.-+..+|
T Consensus 185 ~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 185 DKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 679999999999999999999 33332222111 2478999999988777664
No 68
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=97.90 E-value=1.1e-05 Score=92.03 Aligned_cols=41 Identities=12% Similarity=0.188 Sum_probs=39.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
.++.|++++.|+.|+++|++|+|+||.....+..+|.++|+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 35789999999999999999999999999999999999987
No 69
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=97.89 E-value=1.1e-05 Score=85.14 Aligned_cols=43 Identities=23% Similarity=0.131 Sum_probs=38.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
-++.+++.+.++.|++.|++++++|+.....+..+.+..|+..
T Consensus 90 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~ 132 (233)
T 3s6j_A 90 IIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDI 132 (233)
T ss_dssp CEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCT
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhh
Confidence 4578999999999999999999999999998888888888743
No 70
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.87 E-value=1.7e-05 Score=82.88 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.+.+++.+.++.|++.|++++++|+.....+......+|+.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~ 129 (225)
T 3d6j_A 89 ILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPD 129 (225)
T ss_dssp EECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCch
Confidence 45789999999999999999999999988888888777764
No 71
>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.84 E-value=1.6e-05 Score=81.66 Aligned_cols=118 Identities=15% Similarity=0.149 Sum_probs=76.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
.+.+++.+.++.|++.|++++++|+....... ....+|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46899999999999999999999999887776 666666532100
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
.++.+.... ...-.|+--..+.+.+.- ....+++||
T Consensus 129 ---------------------~~~~~~~~~----------------------~~Kp~~~~~~~~~~~~~i-~~~~~~~iG 164 (207)
T 2go7_A 129 ---------------------EILTSQSGF----------------------VRKPSPEAATYLLDKYQL-NSDNTYYIG 164 (207)
T ss_dssp ---------------------EEECGGGCC----------------------CCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ---------------------eEEecCcCC----------------------CCCCCcHHHHHHHHHhCC-CcccEEEEC
Confidence 011100000 000001111234444433 346799999
Q ss_pred CCCCChhhhhhcCee-EEecCccchhhhhhcceeccchHhHHHH
Q 001335 859 DGANDVSMIQAAHIG-VGISGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 859 DG~ND~~ml~~AdvG-Iam~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
|+.||+.|++.|+++ |+|.+.. . .||+++.+..-+..+
T Consensus 165 D~~nDi~~~~~aG~~~i~~~~~~-~----~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 165 DRTLDVEFAQNSGIQSINFLEST-Y----EGNHRIQALADISRI 203 (207)
T ss_dssp SSHHHHHHHHHHTCEEEESSCCS-C----TTEEECSSTTHHHHH
T ss_pred CCHHHHHHHHHCCCeEEEEecCC-C----CCCEEeCCHHHHHHH
Confidence 999999999999998 6774332 2 689999887666554
No 72
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=97.83 E-value=2.2e-05 Score=81.24 Aligned_cols=122 Identities=11% Similarity=0.012 Sum_probs=80.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 134 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI---------------------------------- 134 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE----------------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee----------------------------------
Confidence 5789999999999999999999999999999999988887532111
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
++.+.... ...-.|.--..+.+.+.- ....+++||
T Consensus 135 ----------------------~~~~~~~~----------------------~~kp~~~~~~~~~~~~~~-~~~~~~~iG 169 (214)
T 3e58_A 135 ----------------------VLSGEEFK----------------------ESKPNPEIYLTALKQLNV-QASRALIIE 169 (214)
T ss_dssp ----------------------EEEGGGCS----------------------SCTTSSHHHHHHHHHHTC-CGGGEEEEE
T ss_pred ----------------------Eeeccccc----------------------CCCCChHHHHHHHHHcCC-ChHHeEEEe
Confidence 01100000 000011112233333432 346799999
Q ss_pred CCCCChhhhhhcCeeEEecCcc-chhhhhhcceeccchHhHH
Q 001335 859 DGANDVSMIQAAHIGVGISGQE-GMQAVMASDFAIAQFRFLT 899 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e-~~~a~~~AD~vi~~~~~l~ 899 (1097)
|+.||+.|.+.|++++.+-+.. ....+..+|+++.+..-+.
T Consensus 170 D~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~ 211 (214)
T 3e58_A 170 DSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVL 211 (214)
T ss_dssp CSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGG
T ss_pred ccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHH
Confidence 9999999999999988763321 1113478999998876543
No 73
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=97.83 E-value=2.6e-05 Score=80.76 Aligned_cols=42 Identities=21% Similarity=0.206 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..
T Consensus 84 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~~~~ 125 (216)
T 2pib_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred CcCcCHHHHHHHHHHCCCCEEEEeCCcHHhHHHHHHhcChHH
Confidence 578999999999999999999999999999999999888743
No 74
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=97.80 E-value=2.9e-05 Score=81.95 Aligned_cols=118 Identities=20% Similarity=0.185 Sum_probs=73.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++.|+++.++|+... +..+...+|+...-..
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~---------------------------------- 135 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHA---------------------------------- 135 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSE----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCE----------------------------------
Confidence 4789999999999999999999999744 6667777776432110
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
++.+... -...-.|.--..+.+.+.- ....+++||
T Consensus 136 ----------------------i~~~~~~----------------------~~~Kp~~~~~~~~~~~lgi-~~~~~i~vG 170 (233)
T 3nas_A 136 ----------------------IVDPTTL----------------------AKGKPDPDIFLTAAAMLDV-SPADCAAIE 170 (233)
T ss_dssp ----------------------ECCC-------------------------------CCHHHHHHHHHTS-CGGGEEEEE
T ss_pred ----------------------EeeHhhC----------------------CCCCCChHHHHHHHHHcCC-CHHHEEEEe
Confidence 1111000 0000112222334444433 346799999
Q ss_pred CCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhHH
Q 001335 859 DGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFLT 899 (1097)
Q Consensus 859 DG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l~ 899 (1097)
|+.||+.|.+.|++++++.+.... .+ .||+++.+..-+.
T Consensus 171 Ds~~Di~~a~~aG~~~~~~~~~~~-~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 171 DAEAGISAIKSAGMFAVGVGQGQP-ML-GADLVVRQTSDLT 209 (233)
T ss_dssp CSHHHHHHHHHTTCEEEECC---------CSEECSSGGGCC
T ss_pred CCHHHHHHHHHcCCEEEEECCccc-cc-cCCEEeCChHhCC
Confidence 999999999999999988544332 34 8999998866643
No 75
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=97.78 E-value=3e-05 Score=81.45 Aligned_cols=119 Identities=13% Similarity=0.064 Sum_probs=82.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 141 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDH--------------------------------- 141 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSE---------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcce---------------------------------
Confidence 46789999999999999999999999998888888888887432111
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCc--ccHHH----HHHHHHcccC
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSP--LQKAQ----VTSLVKKGAR 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP--~qK~~----iv~~lk~~~~ 851 (1097)
+ +.+...+ +-|.. +.+.+.- ..
T Consensus 142 -----------------------~----------------------------~~~~~~~~~kp~~~~~~~~~~~~~~-~~ 169 (230)
T 3um9_A 142 -----------------------L----------------------------ISVDEVRLFKPHQKVYELAMDTLHL-GE 169 (230)
T ss_dssp -----------------------E----------------------------EEGGGTTCCTTCHHHHHHHHHHHTC-CG
T ss_pred -----------------------e----------------------------EehhhcccCCCChHHHHHHHHHhCC-Cc
Confidence 0 1110111 11222 2333322 34
Q ss_pred ceEEEecCCCCChhhhhhcCeeEEecC---ccchhhhhhcceeccchHhHHHH
Q 001335 852 KITLSIGDGANDVSMIQAAHIGVGISG---QEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 852 ~~vlaiGDG~ND~~ml~~AdvGIam~g---~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
..+++|||+.||+.|.+.|++++++-. ......+..+|+++.++.-+..+
T Consensus 170 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 170 SEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp GGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred ccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 679999999999999999999998721 11222456899999998776655
No 76
>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A
Probab=97.71 E-value=5.1e-05 Score=79.70 Aligned_cols=125 Identities=20% Similarity=0.210 Sum_probs=82.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...-..
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--------------------------------- 128 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--------------------------------- 128 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE---------------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE---------------------------------
Confidence 46789999999999999999999999998888888888887432110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
++.+.... ...-.|.-...+.+.+.- ....+++|
T Consensus 129 -----------------------i~~~~~~~----------------------~~Kp~~~~~~~~~~~~~~-~~~~~~~v 162 (222)
T 2nyv_A 129 -----------------------IVGGDTFG----------------------EKKPSPTPVLKTLEILGE-EPEKALIV 162 (222)
T ss_dssp -----------------------EECTTSSC----------------------TTCCTTHHHHHHHHHHTC-CGGGEEEE
T ss_pred -----------------------EEecCcCC----------------------CCCCChHHHHHHHHHhCC-CchhEEEE
Confidence 11111000 000012222333344432 34679999
Q ss_pred cCCCCChhhhhhcCee-EEec-CccchhhhhhcceeccchHhHHHHH
Q 001335 858 GDGANDVSMIQAAHIG-VGIS-GQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvG-Iam~-g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
||+.||+.|.+.||++ |++. |...... ..+|+++.++.-+..++
T Consensus 163 GD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 163 GDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp ESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHH
Confidence 9999999999999998 6773 3221112 57899998877766653
No 77
>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6
Probab=97.71 E-value=2.9e-05 Score=82.96 Aligned_cols=42 Identities=21% Similarity=0.224 Sum_probs=38.5
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.++.+++.++++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 467899999999999999999999999999899999998874
No 78
>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A
Probab=97.71 E-value=2e-05 Score=82.19 Aligned_cols=47 Identities=9% Similarity=0.013 Sum_probs=37.7
Q ss_pred cCceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHhH
Q 001335 850 ARKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRFL 898 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~l 898 (1097)
....+++|||+.||+.|++.|+++++|.+... ..+ .||+++.+..-+
T Consensus 161 ~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~-~a~~v~~~~~el 207 (221)
T 2wf7_A 161 APSESIGLEDSQAGIQAIKDSGALPIGVGRPE-DLG-DDIVIVPDTSHY 207 (221)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESCHH-HHC-SSSEEESSGGGC
T ss_pred ChhHeEEEeCCHHHHHHHHHCCCEEEEECCHH-Hhc-cccchhcCHHhC
Confidence 34679999999999999999999999965433 245 899998876653
No 79
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=97.69 E-value=8.7e-05 Score=78.10 Aligned_cols=115 Identities=13% Similarity=0.093 Sum_probs=78.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-...
T Consensus 102 ~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i-------------------------------- 149 (231)
T 3kzx_A 102 FMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSI-------------------------------- 149 (231)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred ceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeE--------------------------------
Confidence 357899999999999999999999999998888888888874321110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccH------HHHHHHHHcccC
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQK------AQVTSLVKKGAR 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK------~~iv~~lk~~~~ 851 (1097)
+.+...+..| ..+.+.+.- ..
T Consensus 150 ----------------------------------------------------~~~~~~~~~Kp~~~~~~~~~~~lgi-~~ 176 (231)
T 3kzx_A 150 ----------------------------------------------------IGSGDTGTIKPSPEPVLAALTNINI-EP 176 (231)
T ss_dssp ----------------------------------------------------EEETSSSCCTTSSHHHHHHHHHHTC-CC
T ss_pred ----------------------------------------------------EcccccCCCCCChHHHHHHHHHcCC-Cc
Confidence 1111111111 233333332 33
Q ss_pred c-eEEEecCCCCChhhhhhcCe-eEEecCccchhhhhhcceeccchHhHHHH
Q 001335 852 K-ITLSIGDGANDVSMIQAAHI-GVGISGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 852 ~-~vlaiGDG~ND~~ml~~Adv-GIam~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
. .+++|||+.||+.|.+.|++ +|.+...+. ..+|+++.++.-+..+
T Consensus 177 ~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~----~~~~~~~~~~~el~~~ 224 (231)
T 3kzx_A 177 SKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI----IKDILSFKNFYDIRNF 224 (231)
T ss_dssp STTEEEEESSHHHHHHHHHTTCEEEEECC---------CCEEESSHHHHHHH
T ss_pred ccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC----CCCceeeCCHHHHHHH
Confidence 4 79999999999999999998 556643332 4678999988887765
No 80
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=97.68 E-value=0.00012 Score=76.77 Aligned_cols=116 Identities=16% Similarity=0.026 Sum_probs=79.4
Q ss_pred ccCCChHHHHHHHHHcC-CeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 699 KLQEGVPACIETLARAG-IKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aG-Ikv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
++.+++.+.++.|++.| +++.++|+.....+..+.+.+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999988888888888777632110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKIT 854 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~v 854 (1097)
.+++...| |...++.+.+. ....+
T Consensus 151 ---------------------------------------------------~~~~~~kp--k~~~~~~~~~~lgi~~~~~ 177 (234)
T 3ddh_A 151 ---------------------------------------------------HIEVMSDK--TEKEYLRLLSILQIAPSEL 177 (234)
T ss_dssp ---------------------------------------------------EEEEESCC--SHHHHHHHHHHHTCCGGGE
T ss_pred ---------------------------------------------------eeeecCCC--CHHHHHHHHHHhCCCcceE
Confidence 02222223 44444444332 34679
Q ss_pred EEecCCC-CChhhhhhcCeeEEec--C----ccchhhh-hhcceeccchHhHHHH
Q 001335 855 LSIGDGA-NDVSMIQAAHIGVGIS--G----QEGMQAV-MASDFAIAQFRFLTDL 901 (1097)
Q Consensus 855 laiGDG~-ND~~ml~~AdvGIam~--g----~e~~~a~-~~AD~vi~~~~~l~~l 901 (1097)
++|||+. ||+.|.+.|++++++- | ......+ ..+|+++.+..-+..+
T Consensus 178 i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 178 LMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred EEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 9999996 9999999999988762 1 1111112 3449999887766554
No 81
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}
Probab=97.68 E-value=0.00027 Score=77.49 Aligned_cols=67 Identities=16% Similarity=0.211 Sum_probs=50.3
Q ss_pred EEEEeCcc--cHHHHHHHHHccc---CceEEEecCCCCChhhhhhcCeeEEecCccchhhhhhcceeccchHh
Q 001335 830 VCCRVSPL--QKAQVTSLVKKGA---RKITLSIGDGANDVSMIQAAHIGVGISGQEGMQAVMASDFAIAQFRF 897 (1097)
Q Consensus 830 i~~r~sP~--qK~~iv~~lk~~~---~~~vlaiGDG~ND~~ml~~AdvGIam~g~e~~~a~~~AD~vi~~~~~ 897 (1097)
.+.+..|. .|...++.+.+.. ...++++||+.||++|++.|++||+|.+... ..+..||+++.+..-
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~~~-~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNATQ-EAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTCCH-HHHHHCCCBCSSCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCccH-HHHHhCCEEcCCCCc
Confidence 45566554 4888777766542 3569999999999999999999999955433 377889998876443
No 82
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=97.66 E-value=4.3e-05 Score=80.52 Aligned_cols=124 Identities=9% Similarity=-0.054 Sum_probs=84.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-... +.
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~--~~---------------------------- 147 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHV--LS---------------------------- 147 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEE--EE----------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEE--EE----------------------------
Confidence 467899999999999999999999999998888888888875321110 00
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcc--cHHHHHHHHHcccCceEE
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL--QKAQVTSLVKKGARKITL 855 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~~~vl 855 (1097)
+.... ...|+ --..+.+.+.- ....++
T Consensus 148 --------------------------~~~~~------------------------~~kp~~~~~~~~~~~~~~-~~~~~~ 176 (233)
T 3umb_A 148 --------------------------VDAVR------------------------LYKTAPAAYALAPRAFGV-PAAQIL 176 (233)
T ss_dssp --------------------------GGGTT------------------------CCTTSHHHHTHHHHHHTS-CGGGEE
T ss_pred --------------------------ecccC------------------------CCCcCHHHHHHHHHHhCC-CcccEE
Confidence 00000 00011 11223333332 346799
Q ss_pred EecCCCCChhhhhhcCeeEEec---CccchhhhhhcceeccchHhHHHHH
Q 001335 856 SIGDGANDVSMIQAAHIGVGIS---GQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIam~---g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
+|||+.||+.|.+.|++++++- +......+..+|+++.++.-+..++
T Consensus 177 ~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 177 FVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp EEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred EEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 9999999999999999999882 2222224567999999988877763
No 83
>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}
Probab=97.64 E-value=7.2e-05 Score=78.68 Aligned_cols=41 Identities=15% Similarity=0.130 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDK---METAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi~ 739 (1097)
.+.+++.+.++.|++.|+++.++|+.. ...+....+.+|+.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~ 142 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLM 142 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCG
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcH
Confidence 458999999999999999999999998 77777777777764
No 84
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=97.63 E-value=8.4e-05 Score=75.09 Aligned_cols=54 Identities=13% Similarity=0.103 Sum_probs=38.5
Q ss_pred cCceEEEecCCCCChhhhhhcCee-EEe-cCccchhhh----hhcceeccchHhHHHHHH
Q 001335 850 ARKITLSIGDGANDVSMIQAAHIG-VGI-SGQEGMQAV----MASDFAIAQFRFLTDLLL 903 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~AdvG-Iam-~g~e~~~a~----~~AD~vi~~~~~l~~lll 903 (1097)
....+++|||+.||+.|.+.|++. |++ .|....... ..+|+++.+..-+..+++
T Consensus 117 ~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 117 DLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp CCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred CHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 346799999999999999999973 444 233222122 457999999888777644
No 85
>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*
Probab=97.61 E-value=4.1e-05 Score=83.66 Aligned_cols=125 Identities=14% Similarity=0.047 Sum_probs=82.1
Q ss_pred ccCCChHHHHHHHHHcCC--eEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 699 KLQEGVPACIETLARAGI--KIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGI--kv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
++.+++.++++.|++.|+ +++++|+.....+..+.+.+|+...-...
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v------------------------------- 190 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGL------------------------------- 190 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEE-------------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceE-------------------------------
Confidence 567899999999999999 99999999999888888888885321111
Q ss_pred HHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cC-c
Q 001335 777 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---AR-K 852 (1097)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~-~ 852 (1097)
+.+..... .. ..++-|..+++.+.+. .. +
T Consensus 191 -------------------------~~~~~~~~--------------------~~--~~~Kp~~~~~~~~~~~lgi~~~~ 223 (282)
T 3nuq_A 191 -------------------------TYCDYSRT--------------------DT--LVCKPHVKAFEKAMKESGLARYE 223 (282)
T ss_dssp -------------------------ECCCCSSC--------------------SS--CCCTTSHHHHHHHHHHHTCCCGG
T ss_pred -------------------------EEeccCCC--------------------cc--cCCCcCHHHHHHHHHHcCCCCcc
Confidence 00000000 00 0122233333333222 33 6
Q ss_pred eEEEecCCCCChhhhhhcCeeEEecCccch-----hhhhhcceeccchHhHHHH
Q 001335 853 ITLSIGDGANDVSMIQAAHIGVGISGQEGM-----QAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 853 ~vlaiGDG~ND~~ml~~AdvGIam~g~e~~-----~a~~~AD~vi~~~~~l~~l 901 (1097)
.+++|||+.||+.|.+.||+|++|....+. .....||+++.+..-|..+
T Consensus 224 ~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 224 NAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp GEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred cEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 799999999999999999998877322221 1134789999887765544
No 86
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=97.60 E-value=0.00025 Score=74.70 Aligned_cols=120 Identities=16% Similarity=0.144 Sum_probs=81.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.+++.++++.|++. +++.++|+.....+......+|+...-...
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-------------------------------- 148 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDI-------------------------------- 148 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEE--------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheE--------------------------------
Confidence 35789999999999999 999999999988888888888874321110
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeC--cccHHHHHHHHHccc----C
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVS--PLQKAQVTSLVKKGA----R 851 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~s--P~qK~~iv~~lk~~~----~ 851 (1097)
+.+... .+-|...++.+.+.. .
T Consensus 149 ----------------------------------------------------~~~~~~~~~kp~~~~~~~~~~~~g~~~~ 176 (238)
T 3ed5_A 149 ----------------------------------------------------FVSEDTGFQKPMKEYFNYVFERIPQFSA 176 (238)
T ss_dssp ----------------------------------------------------EEGGGTTSCTTCHHHHHHHHHTSTTCCG
T ss_pred ----------------------------------------------------EEecccCCCCCChHHHHHHHHHcCCCCh
Confidence 000000 111233333222222 3
Q ss_pred ceEEEecCCC-CChhhhhhcCeeE-Ee-cCccchhhhhhcceeccchHhHHHHH
Q 001335 852 KITLSIGDGA-NDVSMIQAAHIGV-GI-SGQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 852 ~~vlaiGDG~-ND~~ml~~AdvGI-am-~g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
..+++|||+. ||+.|.+.||++. .+ .+......+..+|+++.++.-+..++
T Consensus 177 ~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 177 EHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp GGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred hHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 5799999998 9999999999954 45 23222225668999999988887764
No 87
>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A
Probab=97.59 E-value=4.2e-05 Score=82.69 Aligned_cols=40 Identities=33% Similarity=0.288 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
++.+++.+.++.|++.|+++.++|++....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 5679999999999999999999999988887777776665
No 88
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=97.59 E-value=0.00026 Score=75.08 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=36.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 47899999999999999999999999888888888888874
No 89
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=97.59 E-value=7.9e-05 Score=80.70 Aligned_cols=41 Identities=22% Similarity=0.121 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|++.|+++.++|+.....+..+...+|+.
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~ 151 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQ 151 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcc
Confidence 57899999999999999999999999988888888877764
No 90
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=97.55 E-value=0.00021 Score=75.38 Aligned_cols=125 Identities=14% Similarity=0.134 Sum_probs=82.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|+ .|++++++|+.....+....+.+|+...-...
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~--------------------------------- 152 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKI--------------------------------- 152 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEE---------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeE---------------------------------
Confidence 57899999999999 99999999999888888888888874321110
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITL 855 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vl 855 (1097)
+.+.... ..+-|..+++.+.+. ....++
T Consensus 153 -----------------------~~~~~~~--------------------------~~kp~~~~~~~~~~~lgi~~~~~~ 183 (240)
T 3qnm_A 153 -----------------------ILSEDLG--------------------------VLKPRPEIFHFALSATQSELRESL 183 (240)
T ss_dssp -----------------------EEGGGTT--------------------------CCTTSHHHHHHHHHHTTCCGGGEE
T ss_pred -----------------------EEeccCC--------------------------CCCCCHHHHHHHHHHcCCCcccEE
Confidence 0000000 011122333322221 346799
Q ss_pred EecCCC-CChhhhhhcCeeEEecCccc-hhhhhhcceeccchHhHHHHHHhhhhh
Q 001335 856 SIGDGA-NDVSMIQAAHIGVGISGQEG-MQAVMASDFAIAQFRFLTDLLLVHGRW 908 (1097)
Q Consensus 856 aiGDG~-ND~~ml~~AdvGIam~g~e~-~~a~~~AD~vi~~~~~l~~lll~~Gr~ 908 (1097)
+|||+. ||+.|.+.|++++++.+... ...+..+|+++.+..-+..+ .+|+.
T Consensus 184 ~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~~ 236 (240)
T 3qnm_A 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL--LEGHH 236 (240)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH--TC---
T ss_pred EECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH--Hhccc
Confidence 999995 99999999999998843332 12456899999998877765 45654
No 91
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20
Probab=97.55 E-value=0.00013 Score=77.52 Aligned_cols=137 Identities=12% Similarity=0.172 Sum_probs=86.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHH
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKR 777 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 777 (1097)
-++.|++.++++.|+++|+++.++|+.....+..+.+ |+... ..++.-...
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~-------------------------- 126 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHAS-------------------------- 126 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEE--------------------------
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeE--------------------------
Confidence 3689999999999999999999999999888888877 66433 222111100
Q ss_pred HHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEe
Q 001335 778 ELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSI 857 (1097)
Q Consensus 778 ~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlai 857 (1097)
..+..+..... +.....+.+.....|..+++.+.. ....+++|
T Consensus 127 ------------------------~~~~~~~~~~~------------kp~p~~~~~~~~~~K~~~~~~~~~-~~~~~~~v 169 (236)
T 2fea_A 127 ------------------------FDNDYIHIDWP------------HSCKGTCSNQCGCCKPSVIHELSE-PNQYIIMI 169 (236)
T ss_dssp ------------------------CSSSBCEEECT------------TCCCTTCCSCCSSCHHHHHHHHCC-TTCEEEEE
T ss_pred ------------------------EcCCceEEecC------------CCCccccccccCCcHHHHHHHHhc-cCCeEEEE
Confidence 00000000000 000000111125578888888865 56789999
Q ss_pred cCCCCChhhhhhcCeeEEecCccchhhhhh--cceeccchHhHHHH
Q 001335 858 GDGANDVSMIQAAHIGVGISGQEGMQAVMA--SDFAIAQFRFLTDL 901 (1097)
Q Consensus 858 GDG~ND~~ml~~AdvGIam~g~e~~~a~~~--AD~vi~~~~~l~~l 901 (1097)
||+.+|+.|.+.||+.+...+.. ..+... +|+++.++.-+..+
T Consensus 170 GDs~~Di~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 170 GDSVTDVEAAKLSDLCFARDYLL-NECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp ECCGGGHHHHHTCSEEEECHHHH-HHHHHTTCCEECCSSHHHHHHH
T ss_pred eCChHHHHHHHhCCeeeechHHH-HHHHHCCCCeeecCCHHHHHHH
Confidence 99999999999999988653321 112222 78988887776655
No 92
>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6
Probab=97.55 E-value=8.8e-05 Score=78.08 Aligned_cols=41 Identities=20% Similarity=0.216 Sum_probs=36.8
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARA-GIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.+.++.|++. |+++.++|+.....+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 5789999999999999 9999999999988888888888774
No 93
>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A
Probab=97.55 E-value=7.8e-05 Score=80.15 Aligned_cols=43 Identities=14% Similarity=0.091 Sum_probs=37.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.-++.+++.++++.|++.|++++++|+.....+..+.+.+|+.
T Consensus 108 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 150 (259)
T 4eek_A 108 GVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLT 150 (259)
T ss_dssp TCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCH
T ss_pred cCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChH
Confidence 3467899999999999999999999999998888888888773
No 94
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=97.54 E-value=0.00022 Score=74.91 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=79.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+...-...
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~--------------------------------- 145 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSI--------------------------------- 145 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEE---------------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHccee---------------------------------
Confidence 5679999999999999 999999999998888888888874321110
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcc--cHHHHHHHHHcccCceEEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPL--QKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~--qK~~iv~~lk~~~~~~vla 856 (1097)
+.+... ....|+ --..+.+.+.- ....+++
T Consensus 146 -----------------------~~~~~~------------------------~~~kp~~~~~~~~~~~~~~-~~~~~~~ 177 (234)
T 3u26_A 146 -----------------------TTSEEA------------------------GFFKPHPRIFELALKKAGV-KGEEAVY 177 (234)
T ss_dssp -----------------------EEHHHH------------------------TBCTTSHHHHHHHHHHHTC-CGGGEEE
T ss_pred -----------------------Eecccc------------------------CCCCcCHHHHHHHHHHcCC-CchhEEE
Confidence 000000 000111 11223333332 3467999
Q ss_pred ecCCC-CChhhhhhcCe---eEEecCccchhhhhhcceeccchHhHHHHH
Q 001335 857 IGDGA-NDVSMIQAAHI---GVGISGQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 857 iGDG~-ND~~ml~~Adv---GIam~g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
|||+. ||+.|.+.|++ +|++.+.. ...+..||+++.++.-+..++
T Consensus 178 vGD~~~~Di~~a~~aG~~~~~v~~~~~~-~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 178 VGDNPVKDCGGSKNLGMTSILLDRKGEK-REFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp EESCTTTTHHHHHTTTCEEEEECSSSTT-GGGGGGCSEEESSTHHHHHHH
T ss_pred EcCCcHHHHHHHHHcCCEEEEECCCCCc-cccccCCCEeeCCHHHHHHHH
Confidence 99997 99999999995 44443322 225568999999988776653
No 95
>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*
Probab=97.45 E-value=0.00035 Score=73.97 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+..
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~ 146 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDR 146 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHH
Confidence 578999999999999999999999999988888888888743
No 96
>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6
Probab=97.45 E-value=4.8e-05 Score=78.78 Aligned_cols=41 Identities=12% Similarity=0.216 Sum_probs=36.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 82 ~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~ 122 (209)
T 2hdo_A 82 IELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFM 122 (209)
T ss_dssp CEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGG
T ss_pred CCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChH
Confidence 35789999999999999 999999999988888888887763
No 97
>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}
Probab=97.42 E-value=0.00021 Score=75.84 Aligned_cols=41 Identities=15% Similarity=0.228 Sum_probs=32.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.++.+++.+.++.|++.|+++.++|+.....+...... |+.
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 147 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFP 147 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHH
Confidence 46789999999999999999999999887766666555 653
No 98
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=97.42 E-value=0.0001 Score=77.53 Aligned_cols=41 Identities=20% Similarity=0.291 Sum_probs=37.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57899999999999999999999999988888888888874
No 99
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=97.40 E-value=0.00029 Score=74.75 Aligned_cols=41 Identities=15% Similarity=0.114 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+++|+++.++|+.....+..+...+|+.
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 150 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG 150 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc
Confidence 46799999999999999999999999888888888887763
No 100
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=97.35 E-value=0.00025 Score=73.62 Aligned_cols=41 Identities=17% Similarity=0.246 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.|++.+.++.|++ |+++.++|+.....+..+.+.+|+..
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~ 124 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHH 124 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGG
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchh
Confidence 578999999999999 99999999988888888888888743
No 101
>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A
Probab=97.33 E-value=0.00018 Score=76.38 Aligned_cols=41 Identities=15% Similarity=0.157 Sum_probs=34.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+++.+.++.|++.|+++.++|+.....+...... |+.
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~ 148 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFP 148 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HST
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHH
Confidence 46789999999999999999999999887766665555 653
No 102
>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}
Probab=97.33 E-value=0.0001 Score=78.74 Aligned_cols=50 Identities=16% Similarity=0.169 Sum_probs=37.3
Q ss_pred ceEEEecCCCCChhhhhhcCeeEEe--cCccchhhhhhcceeccchHhHHHH
Q 001335 852 KITLSIGDGANDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 852 ~~vlaiGDG~ND~~ml~~AdvGIam--~g~e~~~a~~~AD~vi~~~~~l~~l 901 (1097)
..+++|||+.||+.|.+.|++.+.+ .+......+..||+++.+..-+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHH
Confidence 6799999999999999999965433 2222223678999999987765443
No 103
>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A
Probab=97.23 E-value=0.00043 Score=71.03 Aligned_cols=40 Identities=10% Similarity=0.161 Sum_probs=35.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+++.+ ++.|++. +++.++|+.....+..+.+.+|+.
T Consensus 73 ~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 73 LKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp CEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred cccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 367899999 9999999 999999999988888888888874
No 104
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=97.21 E-value=0.0005 Score=69.94 Aligned_cols=42 Identities=19% Similarity=0.223 Sum_probs=38.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCC-hhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDK-METAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~-~~ta~~ia~~~gi~ 739 (1097)
-++.+++.++|+.|+++|++++++||.. ...+..+.+.+|+.
T Consensus 67 ~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 67 VRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp ECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred cCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 3678999999999999999999999998 68888899888874
No 105
>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6
Probab=97.20 E-value=0.00036 Score=73.02 Aligned_cols=52 Identities=15% Similarity=0.255 Sum_probs=38.7
Q ss_pred cCceEEEecCCCCChhhhhhcCee-EEecCccc------hhhhhh-cceeccchHhHHHH
Q 001335 850 ARKITLSIGDGANDVSMIQAAHIG-VGISGQEG------MQAVMA-SDFAIAQFRFLTDL 901 (1097)
Q Consensus 850 ~~~~vlaiGDG~ND~~ml~~AdvG-Iam~g~e~------~~a~~~-AD~vi~~~~~l~~l 901 (1097)
....+++|||+.||+.|.+.|+++ |++.+... ...+.. ||+++.+..-+..+
T Consensus 159 ~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 159 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred ChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 346799999999999999999998 66643322 124555 99999887766554
No 106
>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}
Probab=97.16 E-value=0.00039 Score=73.90 Aligned_cols=122 Identities=9% Similarity=-0.002 Sum_probs=82.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++. +++.++|+.....+..+...+|+.-..
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f~~------------------------------------ 158 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPWDV------------------------------------ 158 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCCSC------------------------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCeeE------------------------------------
Confidence 5679999999999997 999999999988888888888873100
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITL 855 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vl 855 (1097)
++.+. .... .+-|..+++.+.+. ....++
T Consensus 159 ----------------------~~~~~------------------------~~~~--~kp~~~~~~~~~~~lgi~~~~~~ 190 (254)
T 3umg_A 159 ----------------------IIGSD------------------------INRK--YKPDPQAYLRTAQVLGLHPGEVM 190 (254)
T ss_dssp ----------------------CCCHH------------------------HHTC--CTTSHHHHHHHHHHTTCCGGGEE
T ss_pred ----------------------EEEcC------------------------cCCC--CCCCHHHHHHHHHHcCCChHHEE
Confidence 00000 0000 11122233333222 346799
Q ss_pred EecCCCCChhhhhhcCeeEEecCccc---h----h--hhhhcceeccchHhHHHHHHhh
Q 001335 856 SIGDGANDVSMIQAAHIGVGISGQEG---M----Q--AVMASDFAIAQFRFLTDLLLVH 905 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIam~g~e~---~----~--a~~~AD~vi~~~~~l~~lll~~ 905 (1097)
+|||+.||+.|.+.|++++++-+... . . .+..+|+++.++.-+..+|..+
T Consensus 191 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~~~ 249 (254)
T 3umg_A 191 LAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLRAG 249 (254)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHHHC
T ss_pred EEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhcCC
Confidence 99999999999999999998843211 0 0 2567899999998888775433
No 107
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=97.07 E-value=0.00066 Score=70.58 Aligned_cols=51 Identities=24% Similarity=0.322 Sum_probs=36.7
Q ss_pred CceEEEecCCCCChhhhhhcCee--EEe-cCccc-hhhhhhcceeccchHhHHHH
Q 001335 851 RKITLSIGDGANDVSMIQAAHIG--VGI-SGQEG-MQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 851 ~~~vlaiGDG~ND~~ml~~AdvG--Iam-~g~e~-~~a~~~AD~vi~~~~~l~~l 901 (1097)
...+++|||+.||+.|.+.|++. |++ .|... ......+|+++.+..-+..+
T Consensus 148 ~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~ 202 (211)
T 2gmw_A 148 MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 202 (211)
T ss_dssp GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred HHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHH
Confidence 45689999999999999999974 555 23221 11234689999887776665
No 108
>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A
Probab=97.07 E-value=0.0011 Score=70.78 Aligned_cols=39 Identities=15% Similarity=0.212 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+ |+++.++|+.....+..+.+.+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 67899999999999 9999999999999888888888874
No 109
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=97.05 E-value=0.0033 Score=67.65 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=35.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~ 740 (1097)
+++-++++++|++|+++|++++++|| +..........++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34456899999999999999999988 67777777888888854
No 110
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=97.05 E-value=0.0032 Score=67.01 Aligned_cols=40 Identities=15% Similarity=0.180 Sum_probs=34.4
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+ .|+++.++|+.....+......+|+.
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~ 151 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLS 151 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcH
Confidence 56899999999999 99999999999887777777777663
No 111
>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}
Probab=97.04 E-value=0.00059 Score=72.67 Aligned_cols=119 Identities=11% Similarity=0.011 Sum_probs=79.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.- .. ++
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f---~~-~~------------------------------ 164 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW---DM-LL------------------------------ 164 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC---SE-EC------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc---ce-EE------------------------------
Confidence 5679999999999985 9999999999888888888888730 00 00
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcc---cCceEE
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKG---ARKITL 855 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~---~~~~vl 855 (1097)
.+.. + -..+-|..+++.+.+. ....++
T Consensus 165 ------------------------~~~~-----------------------~---~~~kp~~~~~~~~~~~lgi~~~~~~ 194 (254)
T 3umc_A 165 ------------------------CADL-----------------------F---GHYKPDPQVYLGACRLLDLPPQEVM 194 (254)
T ss_dssp ------------------------CHHH-----------------------H---TCCTTSHHHHHHHHHHHTCCGGGEE
T ss_pred ------------------------eecc-----------------------c---ccCCCCHHHHHHHHHHcCCChHHEE
Confidence 0000 0 0011223333322221 346799
Q ss_pred EecCCCCChhhhhhcCeeEEecCc---cc----hhh--hhhcceeccchHhHHHHH
Q 001335 856 SIGDGANDVSMIQAAHIGVGISGQ---EG----MQA--VMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 856 aiGDG~ND~~ml~~AdvGIam~g~---e~----~~a--~~~AD~vi~~~~~l~~ll 902 (1097)
+|||+.||+.|.+.|+++++|-+. .+ ... +..+|+++.++.-+..+|
T Consensus 195 ~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 195 LCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp EEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred EEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 999999999999999999988431 01 112 567999999988877663
No 112
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=97.01 E-value=0.00074 Score=68.36 Aligned_cols=39 Identities=18% Similarity=0.320 Sum_probs=32.2
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
+.+++.+.++.|++.|++++++|+... .+....+.+|+.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~ 121 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIA 121 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCG
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCH
Confidence 689999999999999999999998764 456666666663
No 113
>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}
Probab=96.98 E-value=0.00083 Score=72.93 Aligned_cols=41 Identities=15% Similarity=-0.066 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARA-GIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.+.+++.+.++.|++. |+++.++|+.....+....+.+|+.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~ 155 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK 155 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 4679999999999999 9999999999988888887777763
No 114
>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}
Probab=96.96 E-value=0.018 Score=61.48 Aligned_cols=40 Identities=13% Similarity=0.116 Sum_probs=35.9
Q ss_pred cCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCc
Q 001335 700 LQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 739 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 739 (1097)
+-+++.++++.+++.|++++++| |+....+.....++|+-
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~ 75 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFD 75 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCC
Confidence 66889999999999999999999 99999888888888874
No 115
>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}
Probab=96.96 E-value=0.00081 Score=70.63 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=39.8
Q ss_pred cCceEEEecCCC-CChhhhhhcCeeEEecCcc----------chhhhhhcceeccchHhHHHH
Q 001335 850 ARKITLSIGDGA-NDVSMIQAAHIGVGISGQE----------GMQAVMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 850 ~~~~vlaiGDG~-ND~~ml~~AdvGIam~g~e----------~~~a~~~AD~vi~~~~~l~~l 901 (1097)
....+++|||+. ||+.|.+.|++++++-+.. ....+..+|+++.+..-+..+
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~ 233 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEA 233 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHH
Confidence 346799999996 9999999999999883221 111347899999998776665
No 116
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=96.92 E-value=0.00077 Score=72.63 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=78.8
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVKRE 778 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1097)
++.+++.++++.|++.|+++.++|+... .+..+.+.+|+...-...
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~~~--------------------------------- 151 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFDFV--------------------------------- 151 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCSCE---------------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhhEE---------------------------------
Confidence 5789999999999999999999999665 467777788874321100
Q ss_pred HHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEEec
Q 001335 779 LNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLSIG 858 (1097)
Q Consensus 779 ~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vlaiG 858 (1097)
+.+... -...-.|.--..+.+.+.- ....+++||
T Consensus 152 -----------------------~~~~~~----------------------~~~Kp~~~~~~~~~~~~g~-~~~~~~~vG 185 (263)
T 3k1z_A 152 -----------------------LTSEAA----------------------GWPKPDPRIFQEALRLAHM-EPVVAAHVG 185 (263)
T ss_dssp -----------------------EEHHHH----------------------SSCTTSHHHHHHHHHHHTC-CGGGEEEEE
T ss_pred -----------------------Eeeccc----------------------CCCCCCHHHHHHHHHHcCC-CHHHEEEEC
Confidence 000000 0000011112233333332 346799999
Q ss_pred CCC-CChhhhhhcCeeEEecCccc--hh---hhhhcceeccchHhHHHHH
Q 001335 859 DGA-NDVSMIQAAHIGVGISGQEG--MQ---AVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 859 DG~-ND~~ml~~AdvGIam~g~e~--~~---a~~~AD~vi~~~~~l~~ll 902 (1097)
|+. ||+.|.+.|++++.+-+... .. ....+|+++.+..-+..+|
T Consensus 186 D~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 186 DNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp SCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred CCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 997 99999999999987733221 11 1236999999988877664
No 117
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=96.78 E-value=0.0053 Score=62.37 Aligned_cols=42 Identities=17% Similarity=0.281 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCCh---hhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKM---ETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~---~ta~~ia~~~gi~~ 740 (1097)
++.+++.++++.|+++|+++.++|+... ..+..+.+.+|+..
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~ 78 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID 78 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh
Confidence 6889999999999999999999998876 78888888888843
No 118
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=96.72 E-value=0.01 Score=63.87 Aligned_cols=45 Identities=11% Similarity=0.009 Sum_probs=37.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCCccC
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLINN 741 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~~~ 741 (1097)
.+++-++++++|++++++|++++++|| +...........+|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 455667899999999999999999999 677777777788888543
No 119
>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}
Probab=96.67 E-value=0.0028 Score=66.12 Aligned_cols=53 Identities=19% Similarity=0.219 Sum_probs=39.6
Q ss_pred cCceEEEecCCC-CChhhhhhcCeeEEe--cCccchhhhhhcceeccchHhHHHHH
Q 001335 850 ARKITLSIGDGA-NDVSMIQAAHIGVGI--SGQEGMQAVMASDFAIAQFRFLTDLL 902 (1097)
Q Consensus 850 ~~~~vlaiGDG~-ND~~ml~~AdvGIam--~g~e~~~a~~~AD~vi~~~~~l~~ll 902 (1097)
....+++|||+. ||+.|.+.|++++.+ .+.........+|+++.++.-+..+|
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 171 DASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 346799999998 999999999998866 22221112567899999988877663
No 120
>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19
Probab=96.64 E-value=0.0017 Score=67.71 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=33.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCCh---------------hhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKM---------------ETAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~---------------~ta~~ia~~~gi 738 (1097)
.++.+++.++|+.|+++|+++.++|+... ..+..+.+.+|+
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 110 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGV 110 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCC
Confidence 46789999999999999999999999987 455555666665
No 121
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=96.62 E-value=0.004 Score=67.12 Aligned_cols=42 Identities=17% Similarity=0.124 Sum_probs=38.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 739 (1097)
+++-+++.++|++|+++|++++++| |+.........+.+|+.
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~ 76 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVD 76 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 5677899999999999999999999 88988888888888874
No 122
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=96.34 E-value=0.01 Score=63.81 Aligned_cols=42 Identities=19% Similarity=0.225 Sum_probs=36.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCccC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLINN 741 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~~~ 741 (1097)
.+ ++++++|++++++|++++++| |+..........++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 44 899999999999999999999 8888888888889998543
No 123
>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A
Probab=96.26 E-value=0.0092 Score=64.02 Aligned_cols=41 Identities=22% Similarity=0.328 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+++.++++.|++ ++++.++|+.....+..+...+|+..
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~ 161 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQS 161 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHh
Confidence 577999999999998 59999999999888888888888743
No 124
>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}
Probab=96.18 E-value=0.002 Score=65.78 Aligned_cols=40 Identities=13% Similarity=0.062 Sum_probs=35.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.+.++.|++.| +++++|+.....+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 47799999999999999 99999999988888888888874
No 125
>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}
Probab=95.95 E-value=0.013 Score=62.01 Aligned_cols=43 Identities=5% Similarity=0.097 Sum_probs=36.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKME----TAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 739 (1097)
+.++.|++.+.++.|+++|+++.++||+... .+..-.+++||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4689999999999999999999999999764 556666777874
No 126
>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}
Probab=95.94 E-value=0.002 Score=66.42 Aligned_cols=36 Identities=8% Similarity=0.082 Sum_probs=30.9
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 735 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 735 (1097)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 567899999999999 999999999887777666655
No 127
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=95.93 E-value=0.017 Score=59.61 Aligned_cols=42 Identities=21% Similarity=0.206 Sum_probs=38.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.|++.++++.|++.|+++.++|+.....+....+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 467999999999999999999999999999999999998854
No 128
>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14
Probab=95.92 E-value=0.03 Score=58.71 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=32.7
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 739 (1097)
+.-+.+.++++.|++.|++++++| |+..........+.|+.
T Consensus 19 ~~~~~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 19 VAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred EeCcCHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 334455889999999999999999 88888777777777763
No 129
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=95.83 E-value=0.0061 Score=68.50 Aligned_cols=35 Identities=17% Similarity=0.075 Sum_probs=32.8
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH
Q 001335 701 QEGVPACIETLARAGIKIWVLTGDKMETAINIAYA 735 (1097)
Q Consensus 701 r~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~ 735 (1097)
-+++++.|+.|+++||++.++|+.+...+..+.+.
T Consensus 258 ypgv~e~L~~Lk~~Gi~laI~Snn~~~~v~~~l~~ 292 (387)
T 3nvb_A 258 FTEFQEWVKKLKNRGIIIAVCSKNNEGKAKEPFER 292 (387)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhh
Confidence 47899999999999999999999999999999987
No 130
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=95.77 E-value=0.0015 Score=62.20 Aligned_cols=42 Identities=12% Similarity=0.045 Sum_probs=35.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.++.|++.++++.|+++|+++.++|+.....+..+.+.+|+.
T Consensus 17 ~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 17 DEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred CccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 356788999999999999999999999888877777777663
No 131
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=95.56 E-value=0.029 Score=57.26 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=30.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIA 733 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia 733 (1097)
++.+++.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999998877664433
No 132
>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13
Probab=95.43 E-value=0.019 Score=64.98 Aligned_cols=42 Identities=17% Similarity=0.213 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999998888888854
No 133
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=95.38 E-value=0.02 Score=60.79 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=35.9
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChh----hHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKME----TAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~----ta~~ia~~~gi~ 739 (1097)
++++.|++.+.++.|+++|+++.++||+... .+..-.+.+||-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 4689999999999999999999999999763 555556677774
No 134
>2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A*
Probab=95.37 E-value=0.12 Score=51.87 Aligned_cols=51 Identities=18% Similarity=0.197 Sum_probs=35.2
Q ss_pred EecchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhc
Q 001335 607 CKGADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEK 686 (1097)
Q Consensus 607 ~KGa~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~ 686 (1097)
.-|..+.|.+.--. ..+...+.+.++..+|..++.+|.
T Consensus 135 ~iGn~~~m~~~gi~----i~~~~~~~~~~~~~~G~T~V~vai-------------------------------------- 172 (185)
T 2kmv_A 135 LIGNREWMIRNGLV----INNDVNDFMTEHERKGRTAVLVAV-------------------------------------- 172 (185)
T ss_dssp EEECHHHHHHHTCC----CCHHHHHHHHHHHHTTCEEEEEEE--------------------------------------
T ss_pred EECCHHHHHHcCCC----CCHHHHHHHHHHHhCCCeEEEEEE--------------------------------------
Confidence 34998777542111 222344556777889998888885
Q ss_pred CceEEEEeeeccc
Q 001335 687 DLTLIGCTAIEDK 699 (1097)
Q Consensus 687 ~l~llG~~~ieD~ 699 (1097)
|-.++|++++.|+
T Consensus 173 dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 DDELCGLIAIADT 185 (185)
T ss_dssp TTEEEEEEEEECC
T ss_pred CCEEEEEEEEEcC
Confidence 5689999999985
No 135
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=95.19 E-value=0.049 Score=56.38 Aligned_cols=40 Identities=15% Similarity=0.155 Sum_probs=34.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
++.+++.++++.|+++|+++.++|+... .+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 6789999999999999999999999866 467777777774
No 136
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=95.18 E-value=0.0017 Score=66.63 Aligned_cols=30 Identities=23% Similarity=0.284 Sum_probs=26.3
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
++.+++.++++.|++.|++++++|+.....
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 578999999999999999999999965444
No 137
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=94.94 E-value=0.032 Score=59.29 Aligned_cols=118 Identities=16% Similarity=0.201 Sum_probs=75.8
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCccCCCeEEEEecCCccchhcccCCChHHHHHHhHHHHH
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIITSETNAIRDVEERGDPVEIARFMREEVK 776 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 776 (1097)
..++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-..
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~-------------------------------- 159 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF-------------------------------- 159 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--------------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--------------------------------
Confidence 34678999999999999999999887754 45667777887532110
Q ss_pred HHHHHHHHhhhhcccccCCCeEEEEEcCccchhhcChhHHHHHHhhhccCCceEEEEeCcccHHHHHHHHHcccCceEEE
Q 001335 777 RELNKCIDEAQQYIHSISGEKLALIIDGKCLMYALDPSLRVILLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGARKITLS 856 (1097)
Q Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~l~~~f~~l~~~~~~vi~~r~sP~qK~~iv~~lk~~~~~~vla 856 (1097)
++.+.... ...=.|+-=..+.+.+.- ....+++
T Consensus 160 ------------------------i~~~~~~~----------------------~~KP~p~~~~~a~~~lg~-~p~e~l~ 192 (250)
T 4gib_A 160 ------------------------IADAGKCK----------------------NNKPHPEIFLMSAKGLNV-NPQNCIG 192 (250)
T ss_dssp ------------------------ECCGGGCC----------------------SCTTSSHHHHHHHHHHTC-CGGGEEE
T ss_pred ------------------------eecccccC----------------------CCCCcHHHHHHHHHHhCC-ChHHeEE
Confidence 11111000 000012222233344433 3467999
Q ss_pred ecCCCCChhhhhhcCe-eEEecCccchhhhhhcceeccchHhH
Q 001335 857 IGDGANDVSMIQAAHI-GVGISGQEGMQAVMASDFAIAQFRFL 898 (1097)
Q Consensus 857 iGDG~ND~~ml~~Adv-GIam~g~e~~~a~~~AD~vi~~~~~l 898 (1097)
|||..+|+.+=++||+ .|++.+.+. ...||+++.++.-|
T Consensus 193 VGDs~~Di~aA~~aG~~~i~v~~~~~---~~~ad~vi~~l~eL 232 (250)
T 4gib_A 193 IEDASAGIDAINSANMFSVGVGNYEN---LKKANLVVDSTNQL 232 (250)
T ss_dssp EESSHHHHHHHHHTTCEEEEESCTTT---TTTSSEEESSGGGC
T ss_pred ECCCHHHHHHHHHcCCEEEEECChhH---hccCCEEECChHhC
Confidence 9999999999999998 667755443 34689999887654
No 138
>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A
Probab=94.67 E-value=0.037 Score=59.10 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=34.2
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhh---HHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMET---AINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t---a~~ia~~~gi~ 739 (1097)
+.++-|++.++|+.|++.|+++.++||+.... +......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 35788999999999999999999999998443 34444566764
No 139
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=94.60 E-value=0.54 Score=49.46 Aligned_cols=63 Identities=16% Similarity=0.152 Sum_probs=41.2
Q ss_pred HHHHHHHHHccc---CceEEEecCCC-CChhhhhhcCee-EEe-cCcc-chhh---hhhcceeccchHhHHHH
Q 001335 839 KAQVTSLVKKGA---RKITLSIGDGA-NDVSMIQAAHIG-VGI-SGQE-GMQA---VMASDFAIAQFRFLTDL 901 (1097)
Q Consensus 839 K~~iv~~lk~~~---~~~vlaiGDG~-ND~~ml~~AdvG-Iam-~g~e-~~~a---~~~AD~vi~~~~~l~~l 901 (1097)
|..+.+.+.+.. ...+++|||+. ||+.|.+.|++. |.+ .|.. ..+. ...+|+++.+..-+..+
T Consensus 181 ~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 181 EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGGSSSCCSEEESCHHHHHHH
T ss_pred CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccccCCCCCEEECCHHHHHHH
Confidence 455555544332 35799999998 999999999984 455 3321 1111 24589998887766554
No 140
>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*
Probab=94.52 E-value=0.17 Score=55.42 Aligned_cols=43 Identities=19% Similarity=0.155 Sum_probs=36.0
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEc---CCChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLT---GDKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlT---GD~~~ta~~ia~~~gi~ 739 (1097)
.+++-+++.++|++|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 57777776777777774
No 141
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=94.41 E-value=0.017 Score=60.33 Aligned_cols=35 Identities=6% Similarity=-0.034 Sum_probs=30.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHH
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMETAINIAY 734 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~ 734 (1097)
++.+++.++++.|++. +++.++|+.....+..+.+
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 4668999999999999 9999999998888776653
No 142
>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*
Probab=94.25 E-value=0.03 Score=61.94 Aligned_cols=42 Identities=17% Similarity=0.223 Sum_probs=38.0
Q ss_pred eeccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 695 AIEDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 695 ~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
.....+.++..+.++.|+++|++|||+||-...-+..+|..+
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344468899999999999999999999999999999999886
No 143
>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*
Probab=93.86 E-value=0.018 Score=57.66 Aligned_cols=41 Identities=20% Similarity=0.275 Sum_probs=34.0
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC---------------ChhhHHHHHHHcCCc
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD---------------KMETAINIAYACNLI 739 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD---------------~~~ta~~ia~~~gi~ 739 (1097)
++.|++.++|+.|+++|++++++|+. ....+..+.+..|+.
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~ 97 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ 97 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC
Confidence 57899999999999999999999997 355566677777763
No 144
>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}
Probab=93.85 E-value=0.11 Score=54.09 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=35.8
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
-++.|++.++++.|+++| ++.++|+.....+..+.+.+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888887776
No 145
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=93.43 E-value=0.075 Score=58.13 Aligned_cols=32 Identities=25% Similarity=0.253 Sum_probs=28.6
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
++++.+++.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 56788999999999999999999999998553
No 146
>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A
Probab=91.32 E-value=0.31 Score=51.95 Aligned_cols=39 Identities=13% Similarity=0.249 Sum_probs=33.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
-++.+++.++++.|+++|+++.++|+-....+..+-+.+
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468899999999999999999999999888777665543
No 147
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=90.56 E-value=0.34 Score=50.91 Aligned_cols=41 Identities=17% Similarity=0.146 Sum_probs=33.0
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
.++.+++.+.++.|+++|+++.++|+... +..+-..+|+..
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 46789999999999999999999998653 455566777743
No 148
>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25
Probab=89.25 E-value=0.36 Score=46.00 Aligned_cols=40 Identities=13% Similarity=0.065 Sum_probs=34.0
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCC---hhhHHHHHHHcCCc
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDK---METAINIAYACNLI 739 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~---~~ta~~ia~~~gi~ 739 (1097)
+-+++.++|++|+++|++++++|||. ...+.....+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 56667777788773
No 149
>2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A
Probab=88.72 E-value=2.9 Score=40.88 Aligned_cols=36 Identities=8% Similarity=0.128 Sum_probs=22.3
Q ss_pred cchhHHHHHhhcCchhHHHHHHHHHHHHHhcCCeEEEEEE
Q 001335 609 GADSVIYERLANGNEDLKKVTREHLEQFGSSGLRTLCLAY 648 (1097)
Q Consensus 609 Ga~~~i~~~~~~~~~~~~~~~~~~l~~~a~~GlR~l~~A~ 648 (1097)
|....|-+.--. ......+.+..+..+|..++.+|.
T Consensus 118 Gn~~~m~~~gi~----~~~~~~~~~~~~~~~G~T~v~va~ 153 (165)
T 2arf_A 118 GNREWLRRNGLT----ISSDVSDAMTDHEMKGQTAILVAI 153 (165)
T ss_dssp ECHHHHHHHHCS----SCHHHHHHHHHHHTTTSEEEEEEE
T ss_pred cCHHHHHhcCCC----CCHHHHHHHHHHHhCCCeEEEEEE
Confidence 988776442111 122344556677789998888885
No 150
>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A
Probab=86.19 E-value=0.33 Score=49.94 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=25.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
+.+++.++++.|+++|+++.++||.....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 46789999999999999999999987543
No 151
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=86.11 E-value=3.9 Score=42.97 Aligned_cols=42 Identities=10% Similarity=0.142 Sum_probs=34.4
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH----cCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA----CNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~----~gi~ 739 (1097)
++.-+++.++++.+++.|+++.++||+...+...++.. +|+.
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~ 65 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIH 65 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCC
Confidence 34446888999999999999999999998887777665 7764
No 152
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=82.17 E-value=0.38 Score=52.32 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=27.4
Q ss_pred ccCCCCceeccCcccccc---------ccceEEEecCCCceeecce
Q 001335 401 AESNTPASARTSNLNEEL---------GQVEYIFSDKTGTLTRNLM 437 (1097)
Q Consensus 401 ~~~~~~~~~r~~~~~e~L---------G~v~~i~~DKTGTLT~n~m 437 (1097)
+-.+.++++|++..+|++ .++. |+||||||||+...
T Consensus 15 ~l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 15 EFQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GGTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HHhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 337788999999998873 3344 67799999997644
No 153
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=78.25 E-value=0.88 Score=53.57 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=24.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD 724 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD 724 (1097)
++.+++.++++.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 67899999999999999999999995
No 154
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=74.30 E-value=2 Score=49.02 Aligned_cols=26 Identities=27% Similarity=0.456 Sum_probs=24.5
Q ss_pred cCCChHHHHHHHHHcCCeEEEEcCCC
Q 001335 700 LQEGVPACIETLARAGIKIWVLTGDK 725 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIkv~mlTGD~ 725 (1097)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
No 155
>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}
Probab=70.87 E-value=1.4 Score=44.60 Aligned_cols=42 Identities=10% Similarity=-0.015 Sum_probs=38.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
.=.+||++.+.++.|++. +++++.|.-....|..+...+++.
T Consensus 66 ~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 66 YVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred EEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 346899999999999998 999999999999999999998874
No 156
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=69.35 E-value=4.1 Score=37.71 Aligned_cols=30 Identities=20% Similarity=0.194 Sum_probs=26.5
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCCChhh
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGDKMET 728 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD~~~t 728 (1097)
++.+++.++|++|+++|++++++||+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 466789999999999999999999998643
No 157
>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22
Probab=66.99 E-value=3.8 Score=43.21 Aligned_cols=35 Identities=3% Similarity=0.045 Sum_probs=28.2
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYAC 736 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~ 736 (1097)
-++.+++.++++. |+++.++|+-+...+..+...+
T Consensus 124 ~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 124 APVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp BCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence 3567888888877 9999999999988777766655
No 158
>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A
Probab=65.92 E-value=1.9 Score=42.97 Aligned_cols=41 Identities=10% Similarity=-0.001 Sum_probs=37.9
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
=.+||++.+.++.+++. +++.+.|.-....|..+...++..
T Consensus 54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 46899999999999998 999999999999999999988874
No 159
>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}
Probab=65.01 E-value=11 Score=36.82 Aligned_cols=25 Identities=12% Similarity=0.252 Sum_probs=23.1
Q ss_pred ccCCChHHHHHHHHHcCCeEEEEcCC
Q 001335 699 KLQEGVPACIETLARAGIKIWVLTGD 724 (1097)
Q Consensus 699 ~lr~~v~e~I~~L~~aGIkv~mlTGD 724 (1097)
++.||+.++++.|++ ++++.++|+.
T Consensus 69 ~~~pg~~e~L~~L~~-~~~~~i~T~~ 93 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNE-HYDIYIATAA 93 (180)
T ss_dssp CBCTTHHHHHHHHTT-TSEEEEEECC
T ss_pred CCCcCHHHHHHHHHh-cCCEEEEeCC
Confidence 688999999999998 4999999997
No 160
>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*
Probab=59.50 E-value=2.8 Score=41.91 Aligned_cols=41 Identities=5% Similarity=0.066 Sum_probs=35.8
Q ss_pred cccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCC
Q 001335 698 DKLQEGVPACIETLARA-GIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
-++.|++.++++.|+++ |+++.++|+.....+..+...+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 36789999999999999 999999999988877777777666
No 161
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=53.31 E-value=6.8 Score=41.18 Aligned_cols=42 Identities=24% Similarity=0.216 Sum_probs=34.7
Q ss_pred cccCCChHHHHHHHHHcCCeEEEEcCCChhhHHHHHHH---cCCc
Q 001335 698 DKLQEGVPACIETLARAGIKIWVLTGDKMETAINIAYA---CNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~aGIkv~mlTGD~~~ta~~ia~~---~gi~ 739 (1097)
+.+-+++.++|++|+++|++++++||+...+...+++. +|+.
T Consensus 16 ~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 16 NRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp TEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 34448999999999999999999999998887777765 4663
No 162
>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A
Probab=49.83 E-value=5.7 Score=39.73 Aligned_cols=42 Identities=7% Similarity=0.003 Sum_probs=35.4
Q ss_pred cccCCChHHHHHHHHHc-CCeEEEEcCCChhhHHHHHHHcCCc
Q 001335 698 DKLQEGVPACIETLARA-GIKIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 698 D~lr~~v~e~I~~L~~a-GIkv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
-++.+|+.++++.|++. |+++.++|+.....+..+....|+.
T Consensus 74 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 116 (197)
T 1q92_A 74 LEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWV 116 (197)
T ss_dssp CCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHH
T ss_pred CCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchH
Confidence 36789999999999999 9999999999877766666666663
No 163
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=46.71 E-value=12 Score=39.11 Aligned_cols=50 Identities=12% Similarity=0.231 Sum_probs=34.3
Q ss_pred cCceEEEecCCC-CChhhhhhcCee-EEe-cCccch-hhh---hhcceeccchHhHH
Q 001335 850 ARKITLSIGDGA-NDVSMIQAAHIG-VGI-SGQEGM-QAV---MASDFAIAQFRFLT 899 (1097)
Q Consensus 850 ~~~~vlaiGDG~-ND~~ml~~AdvG-Iam-~g~e~~-~a~---~~AD~vi~~~~~l~ 899 (1097)
....++||||+. +|+.+-+.|++. |.+ .|.... ... ..+|+++.+..-+.
T Consensus 201 ~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~ 257 (263)
T 1zjj_A 201 PGEELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELI 257 (263)
T ss_dssp TTCEEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGG
T ss_pred CcccEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHH
Confidence 456899999995 999999999985 555 333211 112 15899888766543
No 164
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=44.93 E-value=52 Score=30.63 Aligned_cols=82 Identities=10% Similarity=0.112 Sum_probs=57.3
Q ss_pred HHHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHH
Q 001335 634 EQFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLAR 713 (1097)
Q Consensus 634 ~~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~ 713 (1097)
.-+...|++|+-++. ..+.+++.+ .-.|.+-..+|+-+.-..--+.+++.++.|++
T Consensus 25 ~~l~~~G~~Vi~lG~-~~p~e~~v~-----------------------~a~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~ 80 (137)
T 1ccw_A 25 HAFTNAGFNVVNIGV-LSPQELFIK-----------------------AAIETKADAILVSSLYGQGEIDCKGLRQKCDE 80 (137)
T ss_dssp HHHHHTTCEEEEEEE-EECHHHHHH-----------------------HHHHHTCSEEEEEECSSTHHHHHTTHHHHHHH
T ss_pred HHHHHCCCEEEECCC-CCCHHHHHH-----------------------HHHhcCCCEEEEEecCcCcHHHHHHHHHHHHh
Confidence 356789999999887 566655432 22345788889888888777889999999999
Q ss_pred cCC--eEEEEcCCC------hhhHHHHHHHcCCc
Q 001335 714 AGI--KIWVLTGDK------METAINIAYACNLI 739 (1097)
Q Consensus 714 aGI--kv~mlTGD~------~~ta~~ia~~~gi~ 739 (1097)
+|. ..+++-|-. .......+++.|..
T Consensus 81 ~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d 114 (137)
T 1ccw_A 81 AGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYD 114 (137)
T ss_dssp TTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCS
T ss_pred cCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCC
Confidence 875 234555643 22235568888883
No 165
>2jmz_A Hypothetical protein MJ0781; unknown function; NMR {Methanocaldococcus jannaschii} PDB: 2jnq_A
Probab=44.05 E-value=19 Score=35.73 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=29.0
Q ss_pred CceEEEeeCCeEEEEecccCccCcEEEEccCCccCce
Q 001335 140 STPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFPAD 176 (1097)
Q Consensus 140 ~~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vPaD 176 (1097)
+-+..+.++|+++.+++++|++||.|.+..+..++.|
T Consensus 102 ~Hp~~v~~~g~~~w~~A~eLk~GD~v~~~~~~~~~~~ 138 (186)
T 2jmz_A 102 DHPVYISKTGEVLEINAEMVKVGDYIYIPKNNTINLD 138 (186)
T ss_dssp TCEEEEEETTEEEEEEGGGCCTTSEEEEECSSSEEEE
T ss_pred CCEEEEeCCCeEEEEEhhcCCCCCEEEecccCCccce
Confidence 3467777888888999999999999998776544433
No 166
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=43.08 E-value=19 Score=38.03 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=36.4
Q ss_pred ccccCCChHHHHHHHHHcCCeEEEEcC---CChhhHHHHHHHcCCc
Q 001335 697 EDKLQEGVPACIETLARAGIKIWVLTG---DKMETAINIAYACNLI 739 (1097)
Q Consensus 697 eD~lr~~v~e~I~~L~~aGIkv~mlTG---D~~~ta~~ia~~~gi~ 739 (1097)
.+++-+++.++|++++++|++++++|| +.........+.+|+-
T Consensus 28 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 28 YNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred CCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 455678999999999999999999996 6777777778888875
No 167
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=42.41 E-value=15 Score=40.24 Aligned_cols=48 Identities=13% Similarity=0.065 Sum_probs=39.0
Q ss_pred EeeeccccCCChHHHHHHHH-Hc----------CCeEEEEcCCChhhHHHHHHHcCCcc
Q 001335 693 CTAIEDKLQEGVPACIETLA-RA----------GIKIWVLTGDKMETAINIAYACNLIN 740 (1097)
Q Consensus 693 ~~~ieD~lr~~v~e~I~~L~-~a----------GIkv~mlTGD~~~ta~~ia~~~gi~~ 740 (1097)
++.+..++-+...+++.++. .+ |+++|++|||.......++.++|+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~atGr~~~~l~~~~~~~gld~ 95 (335)
T 3n28_A 37 WIVFGHYLTPAQFEDMDFFTNRFNAILDMWKVGRYEVALMDGELTSEHETILKALELDY 95 (335)
T ss_dssp EEEEESCCCHHHHHHHHHHHTSCCCEEEEEEETTEEEEEESSCCCHHHHHHHHHHTCEE
T ss_pred EEEECCCCCHHHHHHHHHHhcccccchheeecccceEEEecCCchHHHHHHHHHcCCCE
Confidence 44555667777788888888 33 89999999999999999999999854
No 168
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=38.87 E-value=28 Score=38.43 Aligned_cols=48 Identities=19% Similarity=0.124 Sum_probs=36.6
Q ss_pred EEeeeccccCCChHHHHHHHHHcCCeEEEEcCCCh----hhHHHHHHHcCCc
Q 001335 692 GCTAIEDKLQEGVPACIETLARAGIKIWVLTGDKM----ETAINIAYACNLI 739 (1097)
Q Consensus 692 G~~~ieD~lr~~v~e~I~~L~~aGIkv~mlTGD~~----~ta~~ia~~~gi~ 739 (1097)
|.+.-.+.+-+++.++|+.|+++|+++.++|+... ..+..+.+.+|+-
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~ 73 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVD 73 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSC
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCC
Confidence 44445567789999999999999999999998753 3345555567873
No 169
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=36.67 E-value=36 Score=33.64 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=28.0
Q ss_pred ceEEEeeCCeEEEEecccCccCcEEEEccCCccC
Q 001335 141 TPVEVLQGQRWVSIPWRKLQVGDIVMVKQDGFFP 174 (1097)
Q Consensus 141 ~~~~V~r~g~~~~i~~~~L~vGDII~l~~ge~vP 174 (1097)
-...+.++|+.+.++.++|++||.|.+..++..|
T Consensus 93 H~~~v~~~g~~~~~~A~eLk~GD~v~v~~~~~~~ 126 (185)
T 2lcj_A 93 HPVLVYENGRFIEKRAFEVKEGDKVLVSELELVE 126 (185)
T ss_dssp SEEEEEETTEEEEEEGGGCCTTCEEEECCCCCSC
T ss_pred CEEEEecCCeEEEEEHHHCCCCCEEEEccccccc
Confidence 4566678888899999999999999998776544
No 170
>1d1n_A Initiation factor 2; beta-barrel, gene regulation; NMR {Geobacillus stearothermophilus} SCOP: b.43.3.1
Probab=31.81 E-value=36 Score=29.78 Aligned_cols=20 Identities=10% Similarity=0.175 Sum_probs=16.5
Q ss_pred ecccCccCcEEEEccCCccC
Q 001335 155 PWRKLQVGDIVMVKQDGFFP 174 (1097)
Q Consensus 155 ~~~~L~vGDII~l~~ge~vP 174 (1097)
.|.|+++||+|..-.-..+|
T Consensus 78 ~~~dik~GD~Ie~ye~~ev~ 97 (99)
T 1d1n_A 78 NFNDIKEGDVIEAYVMQEVA 97 (99)
T ss_dssp TCSSCSSCSEEEEECCSCCC
T ss_pred CcCCCCCCCEEEEEEEEEEc
Confidence 68999999999987766665
No 171
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=28.68 E-value=2.9e+02 Score=23.95 Aligned_cols=17 Identities=24% Similarity=0.497 Sum_probs=10.9
Q ss_pred HHHHHHHHhcCCeEEEE
Q 001335 630 REHLEQFGSSGLRTLCL 646 (1097)
Q Consensus 630 ~~~l~~~a~~GlR~l~~ 646 (1097)
++.+.+...+|.|+..+
T Consensus 16 keivreikrqgvrvvll 32 (162)
T 2l82_A 16 KEIVREIKRQGVRVVLL 32 (162)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHhCCeEEEEE
Confidence 34455667788887654
No 172
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=28.48 E-value=63 Score=31.01 Aligned_cols=81 Identities=14% Similarity=0.207 Sum_probs=56.7
Q ss_pred HHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHc
Q 001335 635 QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARA 714 (1097)
Q Consensus 635 ~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~a 714 (1097)
-+...|+.|+.++.. .+.+++.+ .-.+.+-.++|+.+....-.+.+++.++.|+++
T Consensus 41 ~l~~~G~eVi~lG~~-~p~e~lv~-----------------------aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~ 96 (161)
T 2yxb_A 41 ALRDAGFEVVYTGLR-QTPEQVAM-----------------------AAVQEDVDVIGVSILNGAHLHLMKRLMAKLREL 96 (161)
T ss_dssp HHHHTTCEEECCCSB-CCHHHHHH-----------------------HHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHhcCCCEEEEEeechhhHHHHHHHHHHHHhc
Confidence 456789999988753 45544322 223568889999998888889999999999998
Q ss_pred CC--eEEEEcCCChhhHHHHHHHcCCc
Q 001335 715 GI--KIWVLTGDKMETAINIAYACNLI 739 (1097)
Q Consensus 715 GI--kv~mlTGD~~~ta~~ia~~~gi~ 739 (1097)
|. -.+++-|-....-...+++.|..
T Consensus 97 g~~~i~v~vGG~~~~~~~~~l~~~G~d 123 (161)
T 2yxb_A 97 GADDIPVVLGGTIPIPDLEPLRSLGIR 123 (161)
T ss_dssp TCTTSCEEEEECCCHHHHHHHHHTTCC
T ss_pred CCCCCEEEEeCCCchhcHHHHHHCCCc
Confidence 74 23455675544444457788873
No 173
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=27.03 E-value=92 Score=32.45 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=54.7
Q ss_pred HHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEEeeeccccCCChHHHHHHHHHc
Q 001335 635 QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGCTAIEDKLQEGVPACIETLARA 714 (1097)
Q Consensus 635 ~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~~~ieD~lr~~v~e~I~~L~~a 714 (1097)
-+...|++|+.++.. .+.+++.+ .-.+.+-..+|+.+....-.+..++.++.|+++
T Consensus 146 ~L~~~G~~Vi~LG~~-vp~e~l~~-----------------------~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~ 201 (258)
T 2i2x_B 146 LLRANGYNVVDLGRD-VPAEEVLA-----------------------AVQKEKPIMLTGTALMTTTMYAFKEVNDMLLEN 201 (258)
T ss_dssp HHHHTTCEEEEEEEE-CCSHHHHH-----------------------HHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTT
T ss_pred HHHHCCCEEEECCCC-CCHHHHHH-----------------------HHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhc
Confidence 457899999999986 55554322 122457889999998888788999999999999
Q ss_pred CCeEEEEcCCChhhHHHHHHHcCC
Q 001335 715 GIKIWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 715 GIkv~mlTGD~~~ta~~ia~~~gi 738 (1097)
|.++-++=|-...+ ...+.++|-
T Consensus 202 ~~~~~v~vGG~~~~-~~~~~~iga 224 (258)
T 2i2x_B 202 GIKIPFACGGGAVN-QDFVSQFAL 224 (258)
T ss_dssp TCCCCEEEESTTCC-HHHHHTSTT
T ss_pred CCCCcEEEECccCC-HHHHHHcCC
Confidence 97654433443333 335566653
No 174
>2crv_A IF-2MT, translation initiation factor IF-2; ribosome, beta barrel, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=24.69 E-value=59 Score=29.49 Aligned_cols=22 Identities=18% Similarity=0.370 Sum_probs=17.9
Q ss_pred ecc-cCccCcEEEEccCCccCce
Q 001335 155 PWR-KLQVGDIVMVKQDGFFPAD 176 (1097)
Q Consensus 155 ~~~-~L~vGDII~l~~ge~vPaD 176 (1097)
.+. |+++||+|..-.-..+|-.
T Consensus 85 ~fniDik~GDiIE~ye~~ev~r~ 107 (120)
T 2crv_A 85 EEKVEFKPGDQVICYEENKVPTK 107 (120)
T ss_dssp CTTSCCCTTEEEEEECCSCCCCC
T ss_pred cCCCCCCCCCEEEEEEEEEEeeE
Confidence 678 9999999998877776654
No 175
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=23.98 E-value=54 Score=33.22 Aligned_cols=78 Identities=12% Similarity=0.136 Sum_probs=55.4
Q ss_pred HHHhcCCeEEEEEEEecCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCceEEEE--eeeccccCCChHHHHHHHH
Q 001335 635 QFGSSGLRTLCLAYRDLSPDMYERWNEKFIQAKSSLRDREQKLDEVAELIEKDLTLIGC--TAIEDKLQEGVPACIETLA 712 (1097)
Q Consensus 635 ~~a~~GlR~l~~A~r~l~~~~~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~l~llG~--~~ieD~lr~~v~e~I~~L~ 712 (1097)
-+...|++|+.++. .++.+++-+ .-.+.+-..+|+ .++-.+-.+..++.++.|+
T Consensus 115 ~l~~~G~~Vi~LG~-~vp~e~iv~-----------------------~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~ 170 (215)
T 3ezx_A 115 MLGANGFQIVDLGV-DVLNENVVE-----------------------EAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLN 170 (215)
T ss_dssp HHHHTSCEEEECCS-SCCHHHHHH-----------------------HHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHH
T ss_pred HHHHCCCeEEEcCC-CCCHHHHHH-----------------------HHHHcCCCEEEEEchhcccCcHHHHHHHHHHHH
Confidence 46789999998875 455554322 223457788888 8888888888999999999
Q ss_pred HcCC--eE-EEEcCCChhhHHHHHHHcCC
Q 001335 713 RAGI--KI-WVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 713 ~aGI--kv-~mlTGD~~~ta~~ia~~~gi 738 (1097)
++|. ++ +++-|.... ...++++|-
T Consensus 171 ~~~~~~~v~v~vGG~~~~--~~~a~~iGa 197 (215)
T 3ezx_A 171 EEKLRDSVKCMFGGAPVS--DKWIEEIGA 197 (215)
T ss_dssp HTTCGGGSEEEEESSSCC--HHHHHHHTC
T ss_pred HcCCCCCCEEEEECCCCC--HHHHHHhCC
Confidence 9997 44 556665443 357777764
No 176
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=23.83 E-value=1.2e+02 Score=23.22 Aligned_cols=42 Identities=17% Similarity=0.093 Sum_probs=33.9
Q ss_pred cCccCcEEEEccCCccCceEEEEeeeCCCceEEEEccccCCc
Q 001335 158 KLQVGDIVMVKQDGFFPADLLFLASTNADGVCYIETANLDGE 199 (1097)
Q Consensus 158 ~L~vGDII~l~~ge~vPaD~vlL~~s~~~g~~~Vdes~LtGE 199 (1097)
++.+||.|++..|..-=-.+.+.+-+..++.+.|.-+++.-|
T Consensus 4 ~~~~Gd~V~V~~Gpf~g~~g~v~~v~~~k~~v~V~v~~~Gr~ 45 (58)
T 1nz9_A 4 AFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFGRE 45 (58)
T ss_dssp SCCTTCEEEECSGGGTTCEEEEEEEETTTTEEEEEEESSSSE
T ss_pred ccCCCCEEEEeecCCCCcEEEEEEEcCCCCEEEEEEEeCCCE
Confidence 578999999999999889999998877667787876554433
No 177
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=20.10 E-value=54 Score=29.93 Aligned_cols=39 Identities=10% Similarity=-0.014 Sum_probs=31.2
Q ss_pred cCCChHHHHHHHHHcCCe-EEEEcCCChhhHHHHHHHcCC
Q 001335 700 LQEGVPACIETLARAGIK-IWVLTGDKMETAINIAYACNL 738 (1097)
Q Consensus 700 lr~~v~e~I~~L~~aGIk-v~mlTGD~~~ta~~ia~~~gi 738 (1097)
..+.+++.++++.+.|+| +|+-.|=..+.+..+|++.||
T Consensus 67 p~~~v~~~v~e~~~~g~k~v~~~~G~~~~e~~~~a~~~Gi 106 (122)
T 3ff4_A 67 NPQNQLSEYNYILSLKPKRVIFNPGTENEELEEILSENGI 106 (122)
T ss_dssp CHHHHGGGHHHHHHHCCSEEEECTTCCCHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhcCCCEEEECCCCChHHHHHHHHHcCC
Confidence 345677889999999987 566677667889999999997
Done!